BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011069
(494 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 213/452 (47%), Gaps = 29/452 (6%)
Query: 30 KLPPGPTPWPIIGNLPQL---GHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
K P P++G+LP L GH H + L K +GPI S+++G TTV++ +AK+
Sbjct: 8 KYPKSLLSLPLVGSLPFLPRHGHM-HNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKE 66
Query: 87 VLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQDL 146
VL R ++ GI + + W+ R++ + F K D +Q L
Sbjct: 67 VLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLA-MATFALFK-DGDQKL 124
Query: 147 RRKKIQQLVAFVQE-SCHAGEAIDIGQAAFDTAVNLLSNTIFSVDL--ADPNSASAREFK 203
+ Q++ + H G++IDI F N++S F+ DP +
Sbjct: 125 EKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDP---ELNVIQ 181
Query: 204 NLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQRLKQRQEHG 263
N G++ K ++ D P L+ + + + S H+KI L I + K++
Sbjct: 182 NYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKS--HVKIRNDLLNKILENYKEKFRSD 239
Query: 264 FVGSKDMLDTLLNI------------SESEKIDRNDFKHLFLDLFAAGAETTSSTLEWAL 311
+ +MLDTL+ +SE + N D+F AG ETT+S ++W L
Sbjct: 240 SI--TNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTL 297
Query: 312 TELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKA 371
L+H+P+ K E+++ +G SD RL L+A ++E LRL P P+LIP KA
Sbjct: 298 AFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKA 357
Query: 372 SVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLG-LDVDVKGRNFELIPF 430
+VD I F V KG +V++N WA+ + W P F PERFL + + +PF
Sbjct: 358 NVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPF 417
Query: 431 GAGRRICPGLPLAIRMLHLMLGSLIKSFDWKL 462
GAG R C G LA + L L++ L++ FD ++
Sbjct: 418 GAGPRSCIGEILARQELFLIMAWLLQRFDLEV 449
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 137/477 (28%), Positives = 226/477 (47%), Gaps = 54/477 (11%)
Query: 22 KSFSRGSIKLPPGPTPWPIIGNLPQLGHKP-HKSLADLAKVHGPIMSLKIGQVTTVVISS 80
K S G KLPPGPTP P+IGN+ Q+G K KSL +L+KV+GP+ +L G VV+
Sbjct: 3 KKTSSGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHG 62
Query: 81 ASMAKQVLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKIC-----NLHIF 135
K+ L D R + +G +GI + +WK++R+ N +
Sbjct: 63 YEAVKEALIDLGEEFSGRGIFPLAERANRG-FGIVF-SNGKKWKEIRRFSLMTLRNFGMG 120
Query: 136 TSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPN 195
D Q+ R +++L C +G A + +++ + F D D
Sbjct: 121 KRSIEDRVQEEARCLVEELRKTKASPCDP--TFILGCAPCNVICSIIFHKRF--DYKD-- 174
Query: 196 SASAREFKNLM-------------WGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHI 242
++F NLM W + + P + D+FP G +L +
Sbjct: 175 ----QQFLNLMEKLNENIKILSSPWIQICNNFSP-IIDYFP--------GTHNKL----L 217
Query: 243 KILEVLDRFIYQRLKQRQEHGFVGS-KDMLDTLLNISESEKIDR------NDFKHLFLDL 295
K + + +I +++K+ QE + + +D +D L E EK ++ ++ +DL
Sbjct: 218 KNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDL 277
Query: 296 FAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKE 355
F AG ETTS+TL +AL L+ PE +K + E+E+ IG+ D + +PY AVV E
Sbjct: 278 FGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHE 337
Query: 356 TLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLG 415
R +P +P + D++ +++PKG +L++ ++ D + NP F P FL
Sbjct: 338 VQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLD 397
Query: 416 LDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMD 472
+ K + +PF AG+RIC G LA L L L S++++F+ L+S V +N+D
Sbjct: 398 EGGNFKKSKY-FMPFSAGKRICVGEALAGMELFLFLTSILQNFN--LKSLVDPKNLD 451
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 227/480 (47%), Gaps = 59/480 (12%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKP-HKSLADLAKVHGPIMSLKIGQVTTVVI 78
A K+ S+G PPGPTP P+IGN+ Q+G K KSL +L+KV+GP+ +L G VV+
Sbjct: 2 AKKTSSKGR---PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVL 58
Query: 79 SSASMAKQVLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKIC-----NLH 133
K+ L D R + +G +GI + +WK++R+ N
Sbjct: 59 HGYEAVKEALIDLGEEFSGRGIFPLAERANRG-FGIVF-SNGKKWKEIRRFSLMTLRNFG 116
Query: 134 IFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFS--VDL 191
+ D Q+ R +++L C +G A N++ + IF D
Sbjct: 117 MGKRSIEDRVQEEARCLVEELRKTKASPCDP--TFILGCAP----CNVICSIIFHKRFDY 170
Query: 192 ADPNSASAREFKNLMWGL------------MVESGKPNVSDFFPMLRKLDIQGVRRRLSR 239
D ++F NLM L V + P + D+FP G +L
Sbjct: 171 KD------QQFLNLMEKLNENIEILSSPWIQVYNNFPALLDYFP--------GTHNKL-- 214
Query: 240 HHIKILEVLDRFIYQRLKQRQEHGFVGS-KDMLDTLLNISESEKIDR------NDFKHLF 292
+K + + +I +++K+ QE + + +D +D L E EK ++ ++
Sbjct: 215 --LKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTA 272
Query: 293 LDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAV 352
+DLF AG ETTS+TL +AL L+ PE +K + E+E+ IG+ D + +PY AV
Sbjct: 273 VDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAV 332
Query: 353 VKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPER 412
V E R +P +P + D++ +++PKG +L++ ++ D + NP F P
Sbjct: 333 VHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHH 392
Query: 413 FLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMD 472
FL + K + +PF AG+RIC G LA L L L S++++F+ L+S V +N+D
Sbjct: 393 FLDEGGNFKKSKY-FMPFSAGKRICVGEALAGMELFLFLTSILQNFN--LKSLVDPKNLD 449
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 137/474 (28%), Positives = 222/474 (46%), Gaps = 47/474 (9%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKP-HKSLADLAKVHGPIMSLKIGQVTTVVI 78
A K+ S+G KLPPGPTP+PIIGN+ Q+ K KSL ++ +GP+ ++ +G TVV+
Sbjct: 2 AKKTSSKG--KLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVL 59
Query: 79 SSASMAKQVLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQ 138
K+ L D R + KG GI + A T WK++R+ + T +
Sbjct: 60 HGYEAVKEALVDLGEEFAGRGSVPILEKVSKG-LGIAFSNAKT-WKEMRR---FSLMTLR 114
Query: 139 KLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNL---LSNTIFSVDLADPN 195
+ +IQ+ + C E + D L N I SV +
Sbjct: 115 NFGMGKRSIEDRIQE-----EARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHNRF 169
Query: 196 SASAREFKNLMWGL------------MVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIK 243
EF LM L V + P + D+FP G+ + L +K
Sbjct: 170 DYKDEEFLKLMESLHENVELLGTPWLQVYNNFPALLDYFP--------GIHKTL----LK 217
Query: 244 ILEVLDRFIYQRLKQRQEHGFVGS-KDMLDTLLNISESEKIDRNDFKHLFL---DLFAAG 299
+ + FI +++K+ Q+ V + +D +D L E E + L + DLF AG
Sbjct: 218 NADYIKNFIMEKVKEHQKLLDVNNPRDFIDCFLIKMEQENNLEFTLESLVIAVSDLFGAG 277
Query: 300 AETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRL 359
ETTS+TL ++L L+ PE ++ + E+E+ IG+ D +R+PY AV+ E R
Sbjct: 278 TETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRF 337
Query: 360 HPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVD 419
+P +P + DV+ + +PKG ++ + ++ D + NP F P FL +
Sbjct: 338 IDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGN 397
Query: 420 VKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDM 473
K ++ +PF AG+R+C G LA L L L S++++F KL+S V +++D+
Sbjct: 398 FKKSDY-FMPFSAGKRMCVGEGLARMELFLFLTSILQNF--KLQSLVEPKDLDI 448
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 231/490 (47%), Gaps = 42/490 (8%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVIS 79
A K+ S+G +K PPGP WP+IG++ LG PH +L+ +++ +G ++ ++IG VV+S
Sbjct: 2 AKKTSSKG-LKNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLS 60
Query: 80 SASMAKQVLQDHDAALCNRNVPDS-----VSSHQKGEYGIPWLPASTQWKKLRKIC--NL 132
+Q L R PD +S+ Q + P W R++ L
Sbjct: 61 GLDTIRQALVRQGDDFKGR--PDLYTFTLISNGQSMSFSPDSGPV---WAARRRLAQNGL 115
Query: 133 HIFTSQKLDAN------QDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTI 186
F+ A+ ++ K+ + L++ +QE + + + N++
Sbjct: 116 KSFSIASDPASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAIC 175
Query: 187 FSVDL-ADPNSASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVR--RRLSRHHIK 243
F + + N +G +V SG P +DF P+LR L + + L+
Sbjct: 176 FGRRYDHNHQELLSLVNLNNNFGEVVGSGNP--ADFIPILRYLPNPSLNAFKDLNEKFYS 233
Query: 244 ILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESEKIDRN------DFK--HLFLDL 295
++ + + Y+ E G + +D+ D+L+ + +++D N D K ++ LDL
Sbjct: 234 FMQKMVKEHYKTF----EKGHI--RDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDL 287
Query: 296 FAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKE 355
F AG +T ++ + W+L LV +P K + EL+ IG+ SD + LPY++A + E
Sbjct: 288 FGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILE 347
Query: 356 TLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLG 415
T R VP IP + D + GF +PKG V VN W I D W NP F PERFL
Sbjct: 348 TFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLT 407
Query: 416 LDVDV-KGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDME 474
D + K + ++I FG G+R C G +A + L L L++ ++ + V +DM
Sbjct: 408 PDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGV---KVDMT 464
Query: 475 EKFGITLQKA 484
+G+T++ A
Sbjct: 465 PIYGLTMKHA 474
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 216/467 (46%), Gaps = 54/467 (11%)
Query: 22 KSFSRGSIKLPPGPTPWPIIGNLPQLGHKP-HKSLADLAKVHGPIMSLKIGQVTTVVISS 80
K S G KLPPGPTP P+IGN+ Q+ K KSL +L+K++GP+ +L G VV+
Sbjct: 3 KKTSSGRGKLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHG 62
Query: 81 ASMAKQVLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKIC-----NLHIF 135
+ K+ L D R +G +GI + +WK++R+ N +
Sbjct: 63 YEVVKEALIDLGEEFSGRGHFPLAERANRG-FGIVF-SNGKRWKEIRRFSLMTLRNFGMG 120
Query: 136 TSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFS--VDLAD 193
D Q+ R +++L C +G A N++ + IF D D
Sbjct: 121 KRSIEDRVQEEARCLVEELRKTKASPCDP--TFILGCAP----CNVICSIIFQKRFDYKD 174
Query: 194 PNSASAREFKNLMWGL------------MVESGKPNVSDFFPMLRKLDIQGVRRRLSRHH 241
++F NLM L + + P + D+FP G +L
Sbjct: 175 ------QQFLNLMEKLNENIRIVSTPWIQICNNFPTIIDYFP--------GTHNKL---- 216
Query: 242 IKILEVLDRFIYQRLKQRQEHGFVGS-KDMLDTLLNISESEKIDRND---FKHLFL---D 294
+K L ++ I +++K+ QE + + +D +D L E EK ++ ++L + D
Sbjct: 217 LKNLAFMESDILEKVKEHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAAD 276
Query: 295 LFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVK 354
L AG ETTS+TL +AL L+ PE +K + E+E+ +G+ D +PY AVV
Sbjct: 277 LLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVH 336
Query: 355 ETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFL 414
E R +P +P + DV+ +++PKG +L + ++ D + NP F P FL
Sbjct: 337 EVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFL 396
Query: 415 GLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+ K N+ +PF AG+RIC G LA L L L ++++F+ K
Sbjct: 397 DEGGNFKKSNY-FMPFSAGKRICVGEGLARMELFLFLTFILQNFNLK 442
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 225/470 (47%), Gaps = 30/470 (6%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVI 78
A K+ S+G KLPPGPTP P IGN QL + + SL +++ +GP+ ++ +G VV+
Sbjct: 2 AKKTSSKG--KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVL 59
Query: 79 SSASMAKQVLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQ 138
++ L D R + KG YG+ + + K+LR+ I T +
Sbjct: 60 CGHDAVREALVDQAEEFSGRGEQATFDWVFKG-YGVVF-SNGERAKQLRRFS---IATLR 114
Query: 139 KLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSAS 198
+ ++IQ+ F+ ++ +I F + +SN I S+ D
Sbjct: 115 DFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRT--VSNVISSIVFGDRFDYK 172
Query: 199 AREFKNLMWGLM--VESGKPNVSDFFPMLRKLDIQGVRRRL---SRHHIKILEVLDRFIY 253
+EF +L+ ++ + + + M V + L + ++L+ L+ FI
Sbjct: 173 DKEFLSLLRMMLGSFQFTSTSTGQLYEMF-----SSVMKHLPGPQQQAFQLLQGLEDFIA 227
Query: 254 QRLKQRQEHGFVGS-KDMLDT-LLNISESEKIDRNDF--KHLF---LDLFAAGAETTSST 306
++++ Q S +D +D+ L+ + E EK +F K+L L+LF AG ET S+T
Sbjct: 228 KKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTT 287
Query: 307 LEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLL 366
L + L+ PE +K E+++ IGK + D A++PY++AV+ E R +P+
Sbjct: 288 LRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMG 347
Query: 367 IPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFE 426
+ R+ D + F +PKG +V ++ RD S + NP F P+ FL K +
Sbjct: 348 LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-A 406
Query: 427 LIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDMEEK 476
+PF G+R C G LA L L +++++F +L+S + +++D+ K
Sbjct: 407 FVPFSIGKRNCFGEGLARMELFLFFTTVMQNF--RLKSSQSPKDIDVSPK 454
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 224/470 (47%), Gaps = 30/470 (6%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVI 78
A K+ S+G KLPPGPTP P IGN QL + + SL +++ +GP+ ++ +G VV+
Sbjct: 2 AKKTSSKG--KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVL 59
Query: 79 SSASMAKQVLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQ 138
++ L D R + KG YG+ + + K+LR+ I T +
Sbjct: 60 CGHDAVREALVDQAEEFSGRGEQATFDWVFKG-YGVVF-SNGERAKQLRRFS---IATLR 114
Query: 139 KLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSAS 198
+ ++IQ+ F+ ++ +I F + +SN I S+ D
Sbjct: 115 DFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRT--VSNVISSIVFGDRFDYK 172
Query: 199 AREFKNLMWGLM--VESGKPNVSDFFPMLRKLDIQGVRRRL---SRHHIKILEVLDRFIY 253
+EF +L+ ++ + + + M V + L + ++L+ L+ FI
Sbjct: 173 DKEFLSLLRMMLGIFQFTSTSTGQLYEMF-----SSVMKHLPGPQQQAFQLLQGLEDFIA 227
Query: 254 QRLKQRQEHGFVGS-KDMLDT-LLNISESEKIDRNDF--KHLF---LDLFAAGAETTSST 306
++++ Q S +D +D+ L+ + E EK +F K+L L+LF G ET S+T
Sbjct: 228 KKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTT 287
Query: 307 LEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLL 366
L + L+ PE +K E+++ IGK + D A++PY++AV+ E R +P+
Sbjct: 288 LRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMS 347
Query: 367 IPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFE 426
+ R+ D + F +PKG +V ++ RD S + NP F P+ FL K +
Sbjct: 348 LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-A 406
Query: 427 LIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDMEEK 476
+PF G+R C G LA L L +++++F +L+S + +++D+ K
Sbjct: 407 FVPFSIGKRNCFGEGLARMELFLFFTTVMQNF--RLKSSQSPKDIDVSPK 454
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 223/470 (47%), Gaps = 30/470 (6%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVI 78
A K+ S+G KLPPGPTP P IGN QL + + SL +++ +GP+ ++ +G VV+
Sbjct: 2 AKKTSSKG--KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVL 59
Query: 79 SSASMAKQVLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQ 138
++ L D R + KG YG+ + + ++ +++ I T +
Sbjct: 60 CGHDAVREALVDQAEEFSGRGEQATFDWVFKG-YGVVF----SNGERAKQLRRFSIATLR 114
Query: 139 KLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSAS 198
+ ++IQ+ F+ ++ +I F + +SN I S+ D
Sbjct: 115 DFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRT--VSNVISSIVFGDRFDYK 172
Query: 199 AREFKNLMWGLM--VESGKPNVSDFFPMLRKLDIQGVRRRL---SRHHIKILEVLDRFIY 253
+EF +L+ ++ + + + M V + L + ++L+ L+ FI
Sbjct: 173 DKEFLSLLRMMLGIFQFTSTSTGQLYEMF-----SSVMKHLPGPQQQAFQLLQGLEDFIA 227
Query: 254 QRLKQRQEHGFVGS-KDMLDT-LLNISESEKIDRNDF--KHLF---LDLFAAGAETTSST 306
++++ Q S +D +D+ L+ + E EK +F K+L L LF G ET S+T
Sbjct: 228 KKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTT 287
Query: 307 LEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLL 366
L + L+ PE +K E+++ IGK + D A++PY++AV+ E R +P+
Sbjct: 288 LRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMS 347
Query: 367 IPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFE 426
+ R+ D + F +PKG +V ++ RD S + NP F P+ FL K +
Sbjct: 348 LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-A 406
Query: 427 LIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDMEEK 476
+PF G+R C G LA L L +++++F +L+S + +++D+ K
Sbjct: 407 FVPFSIGKRNCFGEGLARMELFLFFTTVMQNF--RLKSSQSPKDIDVSPK 454
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 223/470 (47%), Gaps = 30/470 (6%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVI 78
A K+ S+G KLPPGPTP P IGN QL + + SL +++ +GP+ ++ +G VV+
Sbjct: 2 AKKTSSKG--KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVL 59
Query: 79 SSASMAKQVLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQ 138
++ L D R + KG YG+ + + K+LR+ I T +
Sbjct: 60 CGHDAVREALVDQAEEFSGRGEQATFDWVFKG-YGVVF-SNGERAKQLRRFS---IATLR 114
Query: 139 KLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSAS 198
+ ++IQ+ F+ ++ +I F + +SN I S+ D
Sbjct: 115 DFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRT--VSNVISSIVFGDRFDYK 172
Query: 199 AREFKNLMWGLM--VESGKPNVSDFFPMLRKLDIQGVRRRL---SRHHIKILEVLDRFIY 253
+EF +L+ ++ + + + M V + L + ++L+ L+ FI
Sbjct: 173 DKEFLSLLRMMLGIFQFTSTSTGQLYEMF-----SSVMKHLPGPQQQAFQLLQGLEDFIA 227
Query: 254 QRLKQRQEHGFVGS-KDMLDT-LLNISESEKIDRNDF--KHLF---LDLFAAGAETTSST 306
++++ Q S +D +D+ L+ + E EK +F K+L L LF G ET S+T
Sbjct: 228 KKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTT 287
Query: 307 LEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLL 366
L + L+ PE +K E+++ IGK + D A++PY++AV+ E R +P+
Sbjct: 288 LRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMS 347
Query: 367 IPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFE 426
+ R+ D + F +PKG +V ++ RD S + NP F P+ FL K +
Sbjct: 348 LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-A 406
Query: 427 LIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDMEEK 476
+PF G+R C G LA L L +++++F +L+S + +++D+ K
Sbjct: 407 FVPFSIGKRNCFGEGLARMELFLFFTTVMQNF--RLKSSQSPKDIDVSPK 454
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 222/470 (47%), Gaps = 30/470 (6%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVI 78
A K+ S+G KLPPGPTP P IGN QL + + SL +++ +GP+ ++ +G VV+
Sbjct: 2 AKKTSSKG--KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVL 59
Query: 79 SSASMAKQVLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQ 138
++ L D R + KG YG+ + + ++ +++ I T +
Sbjct: 60 CGHDAVREALVDQAEEFSGRGEQATFDWVFKG-YGVVF----SNGERAKQLRRFSIATLR 114
Query: 139 KLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSAS 198
+ ++IQ+ F+ ++ +I F + +SN I S+ D
Sbjct: 115 DFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRT--VSNVISSIVFGDRFDYK 172
Query: 199 AREFKNLMWGLM--VESGKPNVSDFFPMLRKLDIQGVRRRL---SRHHIKILEVLDRFIY 253
+EF +L+ ++ + + + M V + L + + L+ L+ FI
Sbjct: 173 DKEFLSLLRMMLGIFQFTSTSTGQLYEMF-----SSVMKHLPGPQQQAFQCLQGLEDFIA 227
Query: 254 QRLKQRQEHGFVGS-KDMLDT-LLNISESEKIDRNDF--KHLF---LDLFAAGAETTSST 306
++++ Q S +D +D+ L+ + E EK +F K+L L LF G ET S+T
Sbjct: 228 KKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTT 287
Query: 307 LEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLL 366
L + L+ PE +K E+++ IGK + D A++PY++AV+ E R +P+
Sbjct: 288 LRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMS 347
Query: 367 IPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFE 426
+ R+ D + F +PKG +V ++ RD S + NP F P+ FL K +
Sbjct: 348 LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-A 406
Query: 427 LIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDMEEK 476
+PF G+R C G LA L L +++++F +L+S + +++D+ K
Sbjct: 407 FVPFSIGKRNCFGEGLARMELFLFFTTVMQNF--RLKSSQSPKDIDVSPK 454
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 217/490 (44%), Gaps = 36/490 (7%)
Query: 18 VKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVV 77
+K L+ +K PP P WP++G++ LG PH +L+ +++ +G ++ ++IG +V
Sbjct: 4 LKGLRPRVPKGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLV 63
Query: 78 ISSASMAKQVLQDHDAALCNRNVPDSVSSH--QKGEYGIPWLPASTQWKKLRKICN--LH 133
+S +Q L R PD +S G+ + W R++ L+
Sbjct: 64 LSRLDTIRQALVRQGDDFKGR--PDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALN 121
Query: 134 IFTSQKLDAN------QDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIF 187
F+ A+ ++ K+ + L++ +QE D + N++ F
Sbjct: 122 TFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCF 181
Query: 188 SVDLADPNSASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEV 247
+ + KN + S N DFFP+LR L ++R + +
Sbjct: 182 GQHFPESSDEMLSLVKNTHEFVETASSG-NPLDFFPILRYLPNPALQRFKAFNQ------ 234
Query: 248 LDRFIYQRLKQRQEH----GFVGSKDMLDTLLNISE------SEKIDRNDFKHLFLDLFA 297
RF++ K QEH +D+ L S+ I + +L D+F
Sbjct: 235 --RFLWFLQKTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFG 292
Query: 298 AGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETL 357
AG +T ++ + W+L LV PE K + EL+ IG+ SD +LPYL+A + ET
Sbjct: 293 AGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETF 352
Query: 358 RLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLD 417
R +P IP + D ++GF +PK V VN W + D WE+P F+PERFL D
Sbjct: 353 RHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTAD 412
Query: 418 VDVKGRNF--ELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDMEE 475
+ +++ FG G+R C G LA + L L L++ ++ + V +D+
Sbjct: 413 GTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGV---KVDLTP 469
Query: 476 KFGITLQKAQ 485
+G+T++ A+
Sbjct: 470 IYGLTMKHAR 479
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 216/458 (47%), Gaps = 34/458 (7%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVI 78
A K+ S+G KLPPGPTP P IGN QL + + SL +++ +GP+ ++ +G VV+
Sbjct: 2 AKKTSSKG--KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVL 59
Query: 79 SSASMAKQVLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQ 138
K+ L D R + KG YG+ A + ++ +++ I T +
Sbjct: 60 CGHDAVKEALVDQAEEFSGRGEQATFDWLFKG-YGV----AFSNGERAKQLRRFSIATLR 114
Query: 139 KLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSAS 198
+ ++IQ+ F+ ++ +I F + +SN I S+ D
Sbjct: 115 GFGVGKRGIEERIQEEAGFLIDALRGTHGANIDPTFFLSRT--VSNVISSIVFGDRFDYE 172
Query: 199 AREFKNLMWGLM--VESGKPNVSDFFPMLRKLDIQGVRRRL---SRHHIKILEVLDRFIY 253
+EF +L+ ++ + + + M V + L + K L+ L+ FI
Sbjct: 173 DKEFLSLLRMMLGSFQFTATSTGQLYEMF-----SSVMKHLPGPQQQAFKELQGLEDFIA 227
Query: 254 QRLKQRQEHGFVGS-KDMLDT-LLNISESEKIDRNDF--KHLF---LDLFAAGAETTSST 306
++++ Q S +D +D+ L+ + E EK +F K+L L+LF AG ET S+T
Sbjct: 228 KKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTT 287
Query: 307 LEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLL 366
L + L+ PE +K E+++ IGK + D A++PY +AV+ E R +P+
Sbjct: 288 LRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMG 347
Query: 367 IPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKG---R 423
+ + + D + F +PKG +V ++ RD + NP F P+ FL D KG +
Sbjct: 348 LAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFL----DKKGQFKK 403
Query: 424 NFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+ +PF G+R C G LA L L +++++F +K
Sbjct: 404 SDAFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFK 441
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 228/487 (46%), Gaps = 30/487 (6%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKP-HKSLADLAKVHGPIMSLKIGQVTTVVI 78
A K+ S+G KLPPGPTP PIIGN+ Q+ K KS + +KV+GP+ ++ G VV
Sbjct: 2 AKKTSSKG--KLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVF 59
Query: 79 SSASMAKQVLQDHDAALCNR-NVPDSVSSHQKGEYGIPWLPAS-TQWKKLRKICNLHIFT 136
K+ L D+ R N P S Q+ G+ + ++ +WK++R+ + T
Sbjct: 60 HGYEAVKEALIDNGEEFSGRGNSPIS----QRITKGLGIISSNGKRWKEIRR---FSLTT 112
Query: 137 SQKLDANQDLRRKKIQQLVAFVQESCHAGEA--IDIGQAAFDTAVNLLSNTIFS--VDLA 192
+ + ++Q+ + E +A D N++ + +F D
Sbjct: 113 LRNFGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYK 172
Query: 193 DPNSASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFI 252
D N + + N + ++ S V + FP+L G ++ +K + + +I
Sbjct: 173 DQNFLTLMKRFNENFRIL-NSPWIQVCNNFPLLIDC-FPGTHNKV----LKNVALTRSYI 226
Query: 253 YQRLKQRQEHGFVGS-KDMLDTLLNISESEKID-RNDFKHLFL-----DLFAAGAETTSS 305
+++K+ Q V + +D +D L E EK + +++F L DLF AG ETTS+
Sbjct: 227 REKVKEHQASLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTST 286
Query: 306 TLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPL 365
TL + L L+ PE +K + E++ IG+ D + +PY AVV E R VP
Sbjct: 287 TLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPT 346
Query: 366 LIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNF 425
+P + D + +++PKG ++ ++ D + NP F P FL + + K ++
Sbjct: 347 GVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDY 406
Query: 426 ELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDMEEKFGITLQKAQ 485
+PF AG+RIC G LA L L L +++++F+ K + N K ++L +
Sbjct: 407 -FMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVDDLKNLNTTAVTKGIVSLPPSY 465
Query: 486 PLRVVPV 492
+ +PV
Sbjct: 466 QICFIPV 472
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 134/456 (29%), Positives = 205/456 (44%), Gaps = 31/456 (6%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKP-HKSLADLAKVHGPIMSLKIGQVTTVVI 78
A K+ S+G KLPPGP P PIIGNL QL K KS LA+ GP+ +L +G VV+
Sbjct: 2 AKKTSSKG--KLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVM 59
Query: 79 SSASMAKQVLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQ 138
K+ L D+ R D + H + GI + T WK +R+ + T +
Sbjct: 60 HGYKAVKEALLDYKDEFSGRG--DLPAFHAHRDRGIIFNNGPT-WKDIRRFS---LTTLR 113
Query: 139 KLDANQDLRRKKIQQLVAFVQESCHA--GEAID----IGQAAFDTAVNLLSNTIFSVDLA 192
+ +IQ+ F+ E+ G+ D IG A + ++L F D
Sbjct: 114 NYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHF--DYN 171
Query: 193 DPNSASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFI 252
D N + L+ ++F L L G R++ IK + + ++
Sbjct: 172 DEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYL--PGSHRKV----IKNVAEVKEYV 225
Query: 253 YQRLKQR-QEHGFVGSKDMLDTLLNISESEKIDRNDFKHL------FLDLFAAGAETTSS 305
+R+K+ Q +D+ D LL E EK + DLF AG ETTS+
Sbjct: 226 SERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTST 285
Query: 306 TLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPL 365
TL + L L+ PE K E+++ IG D +PY+ AVV E R VP
Sbjct: 286 TLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPS 345
Query: 366 LIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNF 425
+P +A+ D G+++PKG V+ ++ D + +P FKPE FL + K ++
Sbjct: 346 NLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDY 405
Query: 426 ELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
PF G+R+C G LA L L+L ++++ F+ K
Sbjct: 406 -FKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLK 440
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 210/466 (45%), Gaps = 28/466 (6%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPH-KSLADLAKVHGPIMSLKIGQVTTVVI 78
A K+ S+G KLPPGP+P P++GNL Q+ K +S L + +G + ++ +G VV+
Sbjct: 2 AKKTSSKG--KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVL 59
Query: 79 SSASMAKQVLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQ 138
++ L D A R V +G YG+ +W+ LR+ + T +
Sbjct: 60 CGTDAIREALVDQAEAFSGRGKIAVVDPIFQG-YGV-IFANGERWRALRRFS---LATMR 114
Query: 139 KLDANQDLRRKKIQQLVAFVQESCHA--GEAIDIGQAAFDTAVNLLSNTIFS--VDLADP 194
+ ++IQ+ + E G +D N++ + +F D DP
Sbjct: 115 DFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDP 174
Query: 195 NSASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQ 254
+ + L+ V + F K G R++ R+ L+ ++ FI Q
Sbjct: 175 VFLRLLDLFFQSFSLISSFSS-QVFELFSGFLKY-FPGTHRQIYRN----LQEINTFIGQ 228
Query: 255 RL-KQRQEHGFVGSKDMLDTLLNISESEKID-RNDFKH-----LFLDLFAAGAETTSSTL 307
+ K R +D +D L E +K D ++F H L LFAAG ETTS+TL
Sbjct: 229 SVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTL 288
Query: 308 EWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLI 367
+ ++ P + + E+E+ IG P D A++PY AV+ E RL +P +
Sbjct: 289 RYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGV 348
Query: 368 PRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFEL 427
P + D Q G+++PK +V + D +E P +F P FL + +K RN
Sbjct: 349 PHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGF 407
Query: 428 IPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDM 473
+PF G+RIC G +A L L +++++F + S V E++D+
Sbjct: 408 MPFSLGKRICLGEGIARTELFLFFTTILQNF--SIASPVPPEDIDL 451
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 209/466 (44%), Gaps = 28/466 (6%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPH-KSLADLAKVHGPIMSLKIGQVTTVVI 78
A K+ S+G KLPPGP+P P++GNL Q+ K +S L + +G + ++ +G VV+
Sbjct: 2 AKKTSSKG--KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVL 59
Query: 79 SSASMAKQVLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQ 138
++ L D A R V +G YG+ +W+ LR+ + T +
Sbjct: 60 CGTDAIREALVDQAEAFSGRGKIAVVDPIFQG-YGV-IFANGERWRALRRFS---LATMR 114
Query: 139 KLDANQDLRRKKIQQLVAFVQESCHA--GEAIDIGQAAFDTAVNLLSNTIFS--VDLADP 194
+ ++IQ+ + E G +D N++ + +F D DP
Sbjct: 115 DFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDP 174
Query: 195 NSASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQ 254
+ + L+ V + F K G R++ R+ L+ ++ FI Q
Sbjct: 175 VFLRLLDLFFQSFSLISSFSS-QVFELFSGFLKY-FPGTHRQIYRN----LQEINTFIGQ 228
Query: 255 RL-KQRQEHGFVGSKDMLDTLLNISESEKID-RNDFKH-----LFLDLFAAGAETTSSTL 307
+ K R +D +D L E +K D ++F H L LF AG ETTS+TL
Sbjct: 229 SVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTL 288
Query: 308 EWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLI 367
+ ++ P + + E+E+ IG P D A++PY AV+ E RL +P +
Sbjct: 289 RYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGV 348
Query: 368 PRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFEL 427
P + D Q G+++PK +V + D +E P +F P FL + +K RN
Sbjct: 349 PHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGF 407
Query: 428 IPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDM 473
+PF G+RIC G +A L L +++++F + S V E++D+
Sbjct: 408 MPFSLGKRICAGEGIARTELFLFFTTILQNF--SIASPVPPEDIDL 451
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 208/466 (44%), Gaps = 28/466 (6%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPH-KSLADLAKVHGPIMSLKIGQVTTVVI 78
A K+ S+G KLPPGP+P P++GNL Q+ K +S L + +G + ++ +G VV+
Sbjct: 2 AKKTSSKG--KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVL 59
Query: 79 SSASMAKQVLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQ 138
++ L D A R V +G YG+ +W+ LR+ + T +
Sbjct: 60 CGTDAIREALVDQAEAFSGRGKIAVVDPIFQG-YGV-IFANGERWRALRRFS---LATMR 114
Query: 139 KLDANQDLRRKKIQQLVAFVQESCHA--GEAIDIGQAAFDTAVNLLSNTIFS--VDLADP 194
+ ++IQ+ + E G +D N++ + +F D DP
Sbjct: 115 DFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDP 174
Query: 195 NSASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQ 254
+ + L+ F L+ G R++ R+ L+ ++ FI Q
Sbjct: 175 VFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHF--PGTHRQIYRN----LQEINTFIGQ 228
Query: 255 RL-KQRQEHGFVGSKDMLDTLLNISESEKID-RNDFKH-----LFLDLFAAGAETTSSTL 307
+ K R +D +D L E +K D ++F H L LF AG ETTS+TL
Sbjct: 229 SVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTL 288
Query: 308 EWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLI 367
+ ++ P + + E+E+ IG P D A++PY AV+ E RL +P +
Sbjct: 289 RYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGV 348
Query: 368 PRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFEL 427
P + D Q G+++PK +V + D +E P +F P FL + +K RN
Sbjct: 349 PHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGF 407
Query: 428 IPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDM 473
+PF G+RIC G +A L L +++++F + S V E++D+
Sbjct: 408 MPFSLGKRICLGEGIARTELFLFFTTILQNF--SIASPVPPEDIDL 451
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 209/466 (44%), Gaps = 28/466 (6%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPH-KSLADLAKVHGPIMSLKIGQVTTVVI 78
A K+ S+G KLPPGP+P P++GNL Q+ K +S L + +G + ++ +G VV+
Sbjct: 2 AKKTSSKG--KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVL 59
Query: 79 SSASMAKQVLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQ 138
++ L D A R V +G YG+ +W+ LR+ + T +
Sbjct: 60 CGTDAIREALVDQAEAFSGRGKIAVVDPIFQG-YGV-IFANGERWRALRRFS---LATMR 114
Query: 139 KLDANQDLRRKKIQQLVAFVQESCHA--GEAIDIGQAAFDTAVNLLSNTIFS--VDLADP 194
+ ++IQ+ + E G +D N++ + +F D DP
Sbjct: 115 DFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDP 174
Query: 195 NSASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQ 254
+ + L+ V + F K G R++ R+ L+ ++ FI Q
Sbjct: 175 VFLRLLDLFFQSFSLISSFSS-QVFELFSGFLKY-FPGTHRQIYRN----LQEINTFIGQ 228
Query: 255 RL-KQRQEHGFVGSKDMLDTLLNISESEKID-RNDFKH-----LFLDLFAAGAETTSSTL 307
+ K R +D +D L E +K D ++F H L LF AG ETTS+TL
Sbjct: 229 SVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTL 288
Query: 308 EWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLI 367
+ ++ P + + E+E+ IG P D A++PY AV+ E RL +P +
Sbjct: 289 RYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGV 348
Query: 368 PRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFEL 427
P + D Q G+++PK +V + D +E P +F P FL + +K RN
Sbjct: 349 PHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGF 407
Query: 428 IPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDM 473
+PF G+RIC G +A L L +++++F + S V E++D+
Sbjct: 408 MPFSLGKRICLGEGIARTELFLFFTTILQNF--SIASPVPPEDIDL 451
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 209/466 (44%), Gaps = 28/466 (6%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPH-KSLADLAKVHGPIMSLKIGQVTTVVI 78
A K+ S+G KLPPGP+P P++GNL Q+ K +S L + +G + ++ +G VV+
Sbjct: 2 AKKTSSKG--KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVL 59
Query: 79 SSASMAKQVLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQ 138
++ L D A R V +G YG+ +W+ LR+ + T +
Sbjct: 60 CGTDAIREALVDQAEAFSGRGKIAVVDPIFQG-YGV-IFANGERWRALRRFS---LATMR 114
Query: 139 KLDANQDLRRKKIQQLVAFVQESCHA--GEAIDIGQAAFDTAVNLLSNTIFS--VDLADP 194
+ ++IQ+ + E G +D N++ + +F D DP
Sbjct: 115 DFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDP 174
Query: 195 NSASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQ 254
+ + L+ V + F K G R++ R+ L+ ++ FI Q
Sbjct: 175 VFLRLLDLFFQSFSLISSFSS-QVFELFSGFLKY-FPGTHRQIYRN----LQEINTFIGQ 228
Query: 255 RL-KQRQEHGFVGSKDMLDTLLNISESEKID-RNDFKH-----LFLDLFAAGAETTSSTL 307
+ K R +D +D L E +K D ++F H L LF AG ETTS+TL
Sbjct: 229 SVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTL 288
Query: 308 EWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLI 367
+ ++ P + + E+E+ IG P D A++PY AV+ E RL +P +
Sbjct: 289 RYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGV 348
Query: 368 PRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFEL 427
P + D Q G+++PK +V + D +E P +F P FL + +K RN
Sbjct: 349 PHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGF 407
Query: 428 IPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDM 473
+PF G+RIC G +A L L +++++F + S V E++D+
Sbjct: 408 MPFSLGKRICLGEGIARTELFLFFTTILQNF--SIASPVPPEDIDL 451
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 213/490 (43%), Gaps = 46/490 (9%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVIS 79
A K+ S+G PPGP WP+IGN +G H S A LA+ +G + +++G VV++
Sbjct: 2 AKKTSSKGK---PPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLN 58
Query: 80 SASMAKQVLQDHDAALCNRNVPDSVSSHQ--KGEYGIPWLPASTQWKKLRKICN--LHIF 135
Q L +A +R S +S + G + + S WK R+ + + F
Sbjct: 59 GERAIHQALVQQGSAFADR---PSFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNF 115
Query: 136 TSQKLDANQDLRR---KKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLA 192
+++ + Q L + ++LVA + G +D N++S F +
Sbjct: 116 FTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYS 175
Query: 193 --DPNSASAREFKNLM-----WGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL 245
DP EF+ L+ +G V +G ++ D P L+ R + R ++
Sbjct: 176 HDDP------EFRELLSHNEEFGRTVGAG--SLVDVMPWLQYF--PNPVRTVFREFEQLN 225
Query: 246 EVLDRFIYQRLKQRQEHGFVGS--KDMLDTLLNISESE----------KIDRNDFKHLFL 293
FI + + E G+ +DM+D + +E + ++D +
Sbjct: 226 RNFSNFILDKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATIT 285
Query: 294 DLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVV 353
D+F A +T S+ L+W L P+ ++ ++EL++ +G+ D LPY+ A +
Sbjct: 286 DIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFL 345
Query: 354 KETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERF 413
E +R VP+ IP + + + G+ +PK V VN W++ D W NP +F P RF
Sbjct: 346 YEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARF 405
Query: 414 LGLDVDV-KGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMD 472
L D + K ++ F G+R C G L+ L L + L D++ E
Sbjct: 406 LDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANP---NEPAK 462
Query: 473 MEEKFGITLQ 482
M +G+T++
Sbjct: 463 MNFSYGLTIK 472
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 198/460 (43%), Gaps = 55/460 (11%)
Query: 55 LADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR-NVPDSVSSHQK---- 109
L L + GP+ L++G VV++S ++ + R +P Q+
Sbjct: 49 LLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDI 108
Query: 110 --GEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESC----- 162
G+Y S WK +K+ S L + + QL QE C
Sbjct: 109 SLGDY-------SLLWKAHKKLTR-----SALLLGTRSSMEPWVDQLT---QEFCERMRV 153
Query: 163 HAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSASAREFKNLMWGLMV--ESGKPNVSD 220
AG + I Q F L + I + + F + + LM + + D
Sbjct: 154 QAGAPVTI-QKEFSL---LTCSIICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQILD 209
Query: 221 FFPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQRLKQRQEHGFVGS-KDMLDTLLNISE 279
P LR G+ R + +E D + ++L++ +E G +DM D +L
Sbjct: 210 MVPFLRFFPNPGLWRL-----KQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVG 264
Query: 280 SEKIDRNDFKHL-------FLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQI 332
++++ + L +DLF G ETT+STL WA+ L+H PE + + EL++++
Sbjct: 265 RQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDREL 324
Query: 333 GKG---NPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVL 389
G G + + D ARLP L A + E LRL P VPL +P + + I G+ +P+G V+
Sbjct: 325 GPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVI 384
Query: 390 VNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHL 449
N D + WE P+ F+P+RFL G N + FG G R+C G LA L +
Sbjct: 385 PNLQGAHLDETVWEQPHEFRPDRFLE-----PGANPSALAFGCGARVCLGESLARLELFV 439
Query: 450 MLGSLIKSFDWKLESKVTTENMDMEEKFGITLQKAQPLRV 489
+L L+++F ++ + G+ L K QP +V
Sbjct: 440 VLARLLQAFTLLPPPVGALPSLQPDPYCGVNL-KVQPFQV 478
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 202/445 (45%), Gaps = 33/445 (7%)
Query: 33 PGPTPWPIIGNLPQLGHKPHKSLADLA--KVHGPIMSLKIGQVTTVVISSASMAKQVLQD 90
PGPTP P +GN+ L + + D+ K +G + GQ + I+ M K VL
Sbjct: 18 PGPTPLPFLGNI--LSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVK 75
Query: 91 HDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKK 150
++ P K I +WK+LR + + FTS KL + +
Sbjct: 76 ECYSVFTNRRPFGPVGFMKSAISIA---EDEEWKRLRSLLS-PTFTSGKLKEMVPIIAQY 131
Query: 151 IQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVD---LADPNSASAREFKNLMW 207
LV ++ G+ + + +++++++T F V+ L +P K L+
Sbjct: 132 GDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLR 191
Query: 208 GLMVESGKPNVSDF---FPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQRLKQRQEHGF 264
++ +++ F P+L L+I R ++ + + + R RL+ Q+H
Sbjct: 192 FDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNF---LRKSVKRMKESRLEDTQKH-- 246
Query: 265 VGSKDMLDTLLNISESEKIDRNDFKHLF-LDLFA-------AGAETTSSTLEWALTELVH 316
D L +++ S++ + + K L L+L A AG ETTSS L + + EL
Sbjct: 247 --RVDFLQLMIDSQNSKETESH--KALSDLELVAQSIIFIFAGYETTSSVLSFIMYELAT 302
Query: 317 SPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQ 376
P+ K + E++ + P + ++ YL VV ETLRL P + + + R DV+
Sbjct: 303 HPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVE 361
Query: 377 ISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRI 436
I+G +PKG V++ ++A+ RD W P F PERF + D + PFG+G R
Sbjct: 362 INGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRN 420
Query: 437 CPGLPLAIRMLHLMLGSLIKSFDWK 461
C G+ A+ + L L ++++F +K
Sbjct: 421 CIGMRFALMNMKLALIRVLQNFSFK 445
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 202/445 (45%), Gaps = 33/445 (7%)
Query: 33 PGPTPWPIIGNLPQLGHKPHKSLADLA--KVHGPIMSLKIGQVTTVVISSASMAKQVLQD 90
PGPTP P +GN+ L + + D+ K +G + GQ + I+ M K VL
Sbjct: 17 PGPTPLPFLGNI--LSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVK 74
Query: 91 HDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKK 150
++ P K I +WK+LR + + FTS KL + +
Sbjct: 75 ECYSVFTNRRPFGPVGFMKSAISIA---EDEEWKRLRSLLS-PTFTSGKLKEMVPIIAQY 130
Query: 151 IQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVD---LADPNSASAREFKNLMW 207
LV ++ G+ + + +++++++T F V+ L +P K L+
Sbjct: 131 GDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLR 190
Query: 208 GLMVESGKPNVSDF---FPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQRLKQRQEHGF 264
++ +++ F P+L L+I R ++ + + + R RL+ Q+H
Sbjct: 191 FDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNF---LRKSVKRMKESRLEDTQKH-- 245
Query: 265 VGSKDMLDTLLNISESEKIDRNDFKHLF-LDLFA-------AGAETTSSTLEWALTELVH 316
D L +++ S++ + + K L L+L A AG ETTSS L + + EL
Sbjct: 246 --RVDFLQLMIDSQNSKETESH--KALSDLELVAQSIIFIFAGYETTSSVLSFIMYELAT 301
Query: 317 SPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQ 376
P+ K + E++ + P + ++ YL VV ETLRL P + + + R DV+
Sbjct: 302 HPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVE 360
Query: 377 ISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRI 436
I+G +PKG V++ ++A+ RD W P F PERF + D + PFG+G R
Sbjct: 361 INGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRN 419
Query: 437 CPGLPLAIRMLHLMLGSLIKSFDWK 461
C G+ A+ + L L ++++F +K
Sbjct: 420 CIGMRFALMNMKLALIRVLQNFSFK 444
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 202/445 (45%), Gaps = 33/445 (7%)
Query: 33 PGPTPWPIIGNLPQLGHKPHKSLADLA--KVHGPIMSLKIGQVTTVVISSASMAKQVLQD 90
PGPTP P +GN+ L + + D+ K +G + GQ + I+ M K VL
Sbjct: 19 PGPTPLPFLGNI--LSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVK 76
Query: 91 HDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKK 150
++ P K I +WK+LR + + FTS KL + +
Sbjct: 77 ECYSVFTNRRPFGPVGFMKSAISIA---EDEEWKRLRSLLS-PTFTSGKLKEMVPIIAQY 132
Query: 151 IQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVD---LADPNSASAREFKNLMW 207
LV ++ G+ + + +++++++T F V+ L +P K L+
Sbjct: 133 GDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLR 192
Query: 208 GLMVESGKPNVSDF---FPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQRLKQRQEHGF 264
++ +++ F P+L L+I R ++ + + + R RL+ Q+H
Sbjct: 193 FDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNF---LRKSVKRMKESRLEDTQKH-- 247
Query: 265 VGSKDMLDTLLNISESEKIDRNDFKHLF-LDLFA-------AGAETTSSTLEWALTELVH 316
D L +++ S++ + + K L L+L A AG ETTSS L + + EL
Sbjct: 248 --RVDFLQLMIDSQNSKETESH--KALSDLELVAQSIIFIFAGYETTSSVLSFIMYELAT 303
Query: 317 SPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQ 376
P+ K + E++ + P + ++ YL VV ETLRL P + + + R DV+
Sbjct: 304 HPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVE 362
Query: 377 ISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRI 436
I+G +PKG V++ ++A+ RD W P F PERF + D + PFG+G R
Sbjct: 363 INGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRN 421
Query: 437 CPGLPLAIRMLHLMLGSLIKSFDWK 461
C G+ A+ + L L ++++F +K
Sbjct: 422 CIGMRFALMNMKLALIRVLQNFSFK 446
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/482 (24%), Positives = 219/482 (45%), Gaps = 49/482 (10%)
Query: 33 PGPTPWPIIGNLPQLG-----HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQV 87
PGPT WP++G+L ++ K H +LA+ K +G I +K+G +V + S S+ + +
Sbjct: 27 PGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEAL 86
Query: 88 LQDHDAALCNRNVP--DSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTS---QKLDA 142
+ A + + H+ YG+ L +W+++R + KLD
Sbjct: 87 YRTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQ-EWQRVRSAFQKKLMKPVEIMKLD- 144
Query: 143 NQDLRRKKIQQLVA-FVQ---ESCHAGEAI-----DIGQAAFDTAVNLLSNTIFSVDLAD 193
KKI +++A F++ E C I ++ + +F++ +L F + L
Sbjct: 145 ------KKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGL-LQK 197
Query: 194 PNSASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFIY 253
A F + +M GK V+ + ++L+ + V + + I + + I
Sbjct: 198 ETEEEALTFITAIKTMMSTFGKMMVTPV-ELHKRLNTK-VWQAHTLAWDTIFKSVKPCID 255
Query: 254 QRLKQRQEHGFVGSKDMLDTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTE 313
RL++ + D L +I + + + + + +L A ETT+++L W L
Sbjct: 256 NRLQRYSQQPGA------DFLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYN 309
Query: 314 LVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASV 373
L +P+A + E++ + D+ +PYL+A +KE++RL P+VP R
Sbjct: 310 LSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTT-RTLDK 368
Query: 374 DVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAG 433
+ + +PKG + +N +G +E+ + F+PER+L + + F +PFG G
Sbjct: 369 PTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKINP--FAHLPFGIG 426
Query: 434 RRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDMEE-KFGITLQKAQPLRVVPV 492
+R+C G LA LHL L +I+ +D V T+N +E GI + P R +P+
Sbjct: 427 KRMCIGRRLAELQLHLALCWIIQKYDI-----VATDNEPVEMLHLGILV----PSRELPI 477
Query: 493 AI 494
A
Sbjct: 478 AF 479
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 191/458 (41%), Gaps = 55/458 (12%)
Query: 51 PHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSSHQKG 110
PH + ++V+G I SL +G ++TVV++ + K+ L +R
Sbjct: 36 PHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADR------------ 83
Query: 111 EYGIPWLPASTQWKKLRKICN------------LHIFTSQKLDANQDLRRKKIQQLVAFV 158
P LP + K+ + N L + + + Q KI + F
Sbjct: 84 ----PCLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFF 139
Query: 159 QES--CHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSASAREFKNL--MWGLMVE-- 212
++ + G D Q + N+ + IF ++ +F+++ ++ VE
Sbjct: 140 NDAIETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDT----DFQHMIELFSENVELA 195
Query: 213 -SGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQ----RLKQRQEHGFVGS 267
S + + FP + L G ++L R+ + + L R I + R Q +H
Sbjct: 196 ASASVFLYNAFPWIGILPF-GKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAY 254
Query: 268 KDMLDTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSE 327
D +D N S + + +L AG ETT++ L WA+ + P + + E
Sbjct: 255 LDEMDQGKN-DPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKE 313
Query: 328 LEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQ 387
++ +G D ++PY +AV+ E LR VPL I S D + G+ +PKG
Sbjct: 314 IDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTT 373
Query: 388 VLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKG---RNFELIPFGAGRRICPGLPLAI 444
V+ N +++ D W +P F PERFL D G + L+PF GRR C G LA
Sbjct: 374 VITNLYSVHFDEKYWRDPEVFHPERFL----DSSGYFAKKEALVPFSLGRRHCLGEHLAR 429
Query: 445 RMLHLMLGSLIKSFDWKLESKVTTENMDMEEKFGITLQ 482
+ L +L++ F ++ D++ + G+TLQ
Sbjct: 430 MEMFLFFTALLQRFHLHFPHELVP---DLKPRLGMTLQ 464
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 191/458 (41%), Gaps = 55/458 (12%)
Query: 51 PHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSSHQKG 110
PH + ++V+G I SL +G ++TVV++ + K+ L +R
Sbjct: 36 PHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADR------------ 83
Query: 111 EYGIPWLPASTQWKKLRKICN------------LHIFTSQKLDANQDLRRKKIQQLVAFV 158
P LP + K+ + N L + + + Q KI + F
Sbjct: 84 ----PCLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFF 139
Query: 159 QES--CHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSASAREFKNL--MWGLMVE-- 212
++ + G D Q + N+ + IF ++ +F+++ ++ VE
Sbjct: 140 NDAIETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDT----DFQHMIELFSENVELA 195
Query: 213 -SGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQ----RLKQRQEHGFVGS 267
S + + FP + L G ++L R+ + + L R I + R Q +H
Sbjct: 196 ASASVFLYNAFPWIGILPF-GKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAY 254
Query: 268 KDMLDTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSE 327
D +D N S + + +L AG ETT++ L WA+ + P + + E
Sbjct: 255 LDEMDQGKN-DPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKE 313
Query: 328 LEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQ 387
++ +G D ++PY +AV+ E LR VPL I S D + G+ +PKG
Sbjct: 314 IDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTT 373
Query: 388 VLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKG---RNFELIPFGAGRRICPGLPLAI 444
V+ N +++ D W +P F PERFL D G + L+PF GRR C G LA
Sbjct: 374 VITNLYSVHFDEKYWRDPEVFHPERFL----DSSGYFAKKEALVPFSLGRRHCLGEHLAR 429
Query: 445 RMLHLMLGSLIKSFDWKLESKVTTENMDMEEKFGITLQ 482
+ L +L++ F ++ D++ + G+TLQ
Sbjct: 430 MEMFLFFTALLQRFHLHFPHELVP---DLKPRLGMTLQ 464
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 13/206 (6%)
Query: 268 KDMLDTLLNISESEK------IDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEAL 321
+D+ + L E K + + + + DLF+AG TTS+TL W L ++ P+
Sbjct: 247 RDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQ 306
Query: 322 SKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFI 381
+ + E++ IG+ E D A +PY AV+ E R VPL + S D+++ GF
Sbjct: 307 RRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFR 366
Query: 382 VPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFE---LIPFGAGRRICP 438
+PKG ++ N ++ +D + WE P+ F PE FL D +G + +PF AGRR C
Sbjct: 367 IPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFL----DAQGHFVKPEAFLPFSAGRRACL 422
Query: 439 GLPLAIRMLHLMLGSLIKSFDWKLES 464
G PLA L L SL++ F + + +
Sbjct: 423 GEPLARMELFLFFTSLLQHFSFSVPT 448
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 191/413 (46%), Gaps = 23/413 (5%)
Query: 57 DLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQ----DHDAALCNRNVPDSVSSHQKGEY 112
D AK +GP++ + + T+V+++S K+ L + D+ + R + G+
Sbjct: 18 DWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMY-RALQTVFGERLFGQ- 75
Query: 113 GIPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQ 172
G+ +W K R++ +L F+ L + + +K +QLV ++ + +
Sbjct: 76 GLVSECNYERWHKQRRVIDL-AFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQD 134
Query: 173 AAFDTAVNLLSNTIFSVD---LADPNSASAREFKNLMWGLMVESGKPNVSDFFPMLRKLD 229
TA+++L+ F ++ L ++ K ++ G + + + ++ F P RK
Sbjct: 135 MLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEG--ITASRNTLAKFLPGKRK-- 190
Query: 230 IQGVRRRLSRHHIKILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESEKIDRNDFK 289
+ R R I+ L + R QR ++ + G D+L +L E + D
Sbjct: 191 ----QLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQDDEGLLD 246
Query: 290 HLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYL 349
+ F+ F AG ET+++ L + + EL PE +++ ++E+++ IG ++ D+ RL YL
Sbjct: 247 N-FVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYL 305
Query: 350 QAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFK 409
V+KE+LRL+P R + I G VP +L + + +GR + +E+P +F
Sbjct: 306 SQVLKESLRLYPPAWGTF-RLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFN 364
Query: 410 PERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKL 462
P+RF F PF G R C G A + +++ L++ +++L
Sbjct: 365 PDRF---GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRL 414
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 189/434 (43%), Gaps = 29/434 (6%)
Query: 53 KSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSSHQKGEY 112
KS + +G + ++ +G V++ ++ L D A R V +G Y
Sbjct: 34 KSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRG-Y 92
Query: 113 GIPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQ 172
G+ + +WK LR+ + T + + ++IQ+ + C E
Sbjct: 93 GVIF-ANGNRWKVLRRFS---VTTMRDFGMGKRSVEERIQE-----EAQCLIEELRKSKG 143
Query: 173 AAFDTAV---NLLSNTIFSVDLADPNSASAREFKNLMWGLMVESGKPNVSDFFPMLRKLD 229
A D ++ +N I S+ +EF M L ++ +S F L +L
Sbjct: 144 ALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLK-MLNLFYQTFSL-ISSVFGQLFEL- 200
Query: 230 IQGVRRRLSRHH---IKILEVLDRFIYQRL-KQRQEHGFVGSKDMLDTLLNISESEKID- 284
G + H K L+ ++ +I + K R+ +D++DT L E EK +
Sbjct: 201 FSGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNA 260
Query: 285 RNDFKHLFLDL-----FAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPME 339
++F H L+L F AG ETTS+TL + ++ P + E+E+ IG P E
Sbjct: 261 HSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPE 320
Query: 340 ESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDA 399
D A++PY +AV+ E R +P+ +P + G+I+PK +V + D
Sbjct: 321 LHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDP 380
Query: 400 STWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFD 459
+E P +F P+ FL + +K + IPF G+RIC G +A L L +++++F
Sbjct: 381 HYFEKPDAFNPDHFLDANGALK-KTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFS 439
Query: 460 WKLESKVTTENMDM 473
+ S V E++D+
Sbjct: 440 --MASPVAPEDIDL 451
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 200/474 (42%), Gaps = 56/474 (11%)
Query: 20 ALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVIS 79
A K+ S+G + P P P + P+ L + G + SL++ VV++
Sbjct: 2 AKKTSSKGKLPPGPLPLPGLGNLLHVDFQNTPY-CFDQLRRRFGDVFSLQLAWTPVVVLN 60
Query: 80 SASMAKQVLQDHDAALCNR-NVPDS----VSSHQKGEYGIPWLPASTQWKKLRKICNLHI 134
+ ++ L H +R VP + +G + + PA W++ R+
Sbjct: 61 GLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLARYGPA---WREQRR------ 111
Query: 135 FTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQ-----AAFDTAVNLLSNTIFSV 189
F+ L N L +K ++Q V A A G+ D AV SN I S+
Sbjct: 112 FSVSTL-RNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAV---SNVIASL 167
Query: 190 DLADPNSASAREFKNLM----WGLMVESGKPNVSDFFPMLRK-LDIQGVRRRLSRHHIKI 244
F L+ GL ESG LR+ L+ V R + K+
Sbjct: 168 TCGRRFEYDDPRFLRLLDLAQEGLKEESG---------FLREVLNAVPVDRHIPALAGKV 218
Query: 245 LEVLDRFIYQRLKQRQEHGFV-----GSKDMLDTLLNISESEK------IDRNDFKHLFL 293
L F+ Q + EH +D+ + L E K + + + +
Sbjct: 219 LRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVA 278
Query: 294 DLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVV 353
DLF+AG TTS+TL W L ++ P+ + + E++ IG+ E D A +PY AV+
Sbjct: 279 DLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVI 338
Query: 354 KETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERF 413
E R VPL + S D+++ GF +PKG ++ N ++ +D + WE P+ F PE F
Sbjct: 339 HEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHF 398
Query: 414 LGLDVDVKGRNFE---LIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLES 464
L D +G + +PF AGRR C G PLA L L SL++ F + + +
Sbjct: 399 L----DAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPT 448
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 204/451 (45%), Gaps = 48/451 (10%)
Query: 62 HGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSSHQKGEYGIPWL-PAS 120
+GPI K+G + +V I + + + ++P ++ H+ + I L S
Sbjct: 47 YGPIYREKLGNLESVYIIHPEDVAHLFKFEGSYPERYDIPPWLAYHRYYQKPIGVLFKKS 106
Query: 121 TQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCH---AGEAI-DIGQAAFD 176
WKK R + N + + + L Q V+ + + +G+ + DI + F
Sbjct: 107 GTWKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDLFH 166
Query: 177 TAVNLLSNTIFSVDLA---DPNSASAREFKNLMWGLMVESGKP--NVSDFFPMLRKLDIQ 231
A ++N +F L + + A++F + ++ M + P NV P L +L
Sbjct: 167 FAFESITNVMFGERLGMLEETVNPEAQKFIDAVYK-MFHTSVPLLNVP---PELYRL--- 219
Query: 232 GVRRRLSRHHIKILEVL-------DRFIYQRLKQRQEHGFVGSKDMLDTLLNISESEKID 284
R + R H+ + + YQ L+++ E F +L LL +SEK+
Sbjct: 220 -FRTKTWRDHVAAWDTIFNKAEKYTEIFYQDLRRKTE--FRNYPGILYCLL---KSEKML 273
Query: 285 RNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIA 344
D K ++ A G TTS TL+W L E+ S + L +++ E DI+
Sbjct: 274 LEDVKANITEMLAGGVNTTSMTLQWHLYEMARS----LNVQEMLREEVLNARRQAEGDIS 329
Query: 345 RL----PYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDAS 400
++ P L+A +KETLRLHP + + + R D+ + +++P V V +A+GRD +
Sbjct: 330 KMLQMVPLLKASIKETLRLHP-ISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPA 388
Query: 401 TWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDW 460
+ +P F P R+L D D+ +F + FG G R C G +A + L L ++++F
Sbjct: 389 FFSSPDKFDPTRWLSKDKDLI--HFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENF-- 444
Query: 461 KLESKVTTENM-DMEEKFGITLQKAQPLRVV 490
KV +++ D++ F + L +P+ +V
Sbjct: 445 ----KVEMQHIGDVDTIFNLILTPDKPIFLV 471
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 112/482 (23%), Positives = 201/482 (41%), Gaps = 80/482 (16%)
Query: 42 GNLPQLGHK---PHKSLADLAKV--HGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALC 96
G +P LGH LA ++++ HG ++ +K+G T +++ + + + D
Sbjct: 29 GGVPLLGHGWRLARDPLAFMSQLRDHGDVVRIKLGPKTVYAVTNPELTGALALNPD---- 84
Query: 97 NRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKI--------CNLHIFTSQKLDANQDLRR 148
Y I A W+ L + N + Q+ R
Sbjct: 85 ---------------YHI----AGPLWESLEGLLGKEGVATANGPLHRRQRRTIQPAFRL 125
Query: 149 KKIQQLVAFVQESCHA-------GEAIDIGQAAFDTAVNLLSNTIFSVDLADPNS----- 196
I ++E HA G+ +D +F AV + + + D +
Sbjct: 126 DAIPAYGPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAARCLLRGQYMDERAERLCV 185
Query: 197 ASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRR---RLSRHHIKILEVLDRFIY 253
A A F+ + ++V G L +L + RR L+ H+ ++D I
Sbjct: 186 ALATVFRGMYRRMVVPLGP---------LYRLPLPANRRFNDALADLHL----LVDEIIA 232
Query: 254 QRLKQRQEHGFVGSKDMLDTLLNISE--SEKIDRNDFKHLFLDLFAAGAETTSSTLEWAL 311
+R Q+ D+L LL + + I + + + G+ET +ST+ W L
Sbjct: 233 ERRASGQK-----PDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLL 287
Query: 312 TELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKA 371
L PE + R E+E G G P+ D+ +L + V+ E +RL PAV +L R+A
Sbjct: 288 QALADHPEHADRIRDEVEAVTG-GRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLT-RRA 345
Query: 372 SVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFG 431
+ ++ G+ +P GA ++ + +AI RD ++++ F P+R+L + + + PF
Sbjct: 346 VAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLP-ERAANVPKYAMKPFS 404
Query: 432 AGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDMEEKFGITLQKAQPLRVVP 491
AG+R CP ++ L L+ +L + ++ +V N + + GITL + L V P
Sbjct: 405 AGKRKCPSDHFSMAQLTLITAALATKYRFE---QVAGSNDAV--RVGITL-RPHDLLVRP 458
Query: 492 VA 493
VA
Sbjct: 459 VA 460
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 196/458 (42%), Gaps = 41/458 (8%)
Query: 49 HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSSHQ 108
HK H + +GPI K+G V +V + + + +P V+ HQ
Sbjct: 29 HKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQ 88
Query: 109 KGEYGIP-WLPASTQWKKLRKICNLHIFTSQK-------LDANQDLRRKKIQQLVAFVQE 160
+ I L S WKK R N + + LDA + R + L +++
Sbjct: 89 YYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDA---VSRDFVSVLHRRIKK 145
Query: 161 SCHAGEAIDIGQAAFDTAVNLLSNTIFSVD---LADPNSASAREFKNLMWGLMVESGKPN 217
+ + DI F A ++N IF L + + A+ F + ++ M + P
Sbjct: 146 AGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQ-MFHTSVPM 204
Query: 218 VS---DFFPMLRKLDIQGVRRRLSRHHIKILEVL----DRFIYQRLKQRQEHGFVGSKDM 270
++ D F + R + + H+ +V+ D + + ++ G V D
Sbjct: 205 LNLPPDLFRLFRT--------KTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSV-HHDY 255
Query: 271 LDTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEK 330
L + K+ D K ++ A G +TTS TL+W L E+ + + R+E+
Sbjct: 256 RGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLA 315
Query: 331 QIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLV 390
+ + + +P L+A +KETLRLHP + + + R D+ + +++P V V
Sbjct: 316 ARHQAQGDMATMLQLVPLLKASIKETLRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQV 374
Query: 391 NAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLM 450
+A+GR+ + + +P +F P R+L D ++ F + FG G R C G +A + +
Sbjct: 375 AIYALGREPTFFFDPENFDPTRWLSKDKNIT--YFRNLGFGWGVRQCLGRRIAELEMTIF 432
Query: 451 LGSLIKSFDWKLESKVTTENM-DMEEKFGITLQKAQPL 487
L +++++F +V +++ D+ F + L +P+
Sbjct: 433 LINMLENF------RVEIQHLSDVGTTFNLILMPEKPI 464
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 111/226 (49%), Gaps = 7/226 (3%)
Query: 267 SKDMLDTLLNI---SESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSK 323
+DMLD L+ + + + + ++ +F+ + AG T+S T W L EL+ +A +
Sbjct: 222 DRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAA 281
Query: 324 ARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVP 383
EL++ G G + + ++P L+ V+KETLRLHP + +L+ R A + ++ G +
Sbjct: 282 VIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIH 340
Query: 384 KGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLA 443
+G V + R + +P+ F P R+ + + IPFGAGR C G A
Sbjct: 341 EGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFA 400
Query: 444 IRMLHLMLGSLIKSFDWKLESKVTTENMDMEEKFGITLQKAQPLRV 489
I + + L++ +++++ + D + + +Q AQP V
Sbjct: 401 IMQIKAIFSVLLREYEFEMAQPPESYRNDHSK---MVVQLAQPAAV 443
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 111/226 (49%), Gaps = 7/226 (3%)
Query: 267 SKDMLDTLLNI---SESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSK 323
+DMLD L+ + + + + ++ +F+ + AG T+S T W L EL+ +A +
Sbjct: 222 DRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAA 281
Query: 324 ARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVP 383
EL++ G G + + ++P L+ V+KETLRLHP + +L+ R A + ++ G +
Sbjct: 282 VIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIH 340
Query: 384 KGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLA 443
+G V + R + +P+ F P R+ + + IPFGAGR C G A
Sbjct: 341 EGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFA 400
Query: 444 IRMLHLMLGSLIKSFDWKLESKVTTENMDMEEKFGITLQKAQPLRV 489
I + + L++ +++++ + D + + +Q AQP V
Sbjct: 401 IMQIKAIFSVLLREYEFEMAQPPESYRNDHSK---MVVQLAQPAAV 443
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 111/226 (49%), Gaps = 7/226 (3%)
Query: 267 SKDMLDTLLNI---SESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSK 323
+DMLD L+ + + + + ++ +F+ + AG T+S T W L EL+ +A +
Sbjct: 222 DRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAA 281
Query: 324 ARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVP 383
EL++ G G + + ++P L+ V+KETLRLHP + +L+ R A + ++ G +
Sbjct: 282 VIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIH 340
Query: 384 KGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLA 443
+G V + R + +P+ F P R+ + + IPFGAGR C G A
Sbjct: 341 EGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFA 400
Query: 444 IRMLHLMLGSLIKSFDWKLESKVTTENMDMEEKFGITLQKAQPLRV 489
I + + L++ +++++ + D + + +Q AQP V
Sbjct: 401 IMQIKAIFSVLLREYEFEMAQPPESYRNDHSK---MVVQLAQPAAV 443
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 110/223 (49%), Gaps = 7/223 (3%)
Query: 267 SKDMLDTLLNI---SESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSK 323
+DMLD L+ + + + + ++ +F+ + AG T+S T W L EL+ +A +
Sbjct: 222 DRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAA 281
Query: 324 ARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVP 383
EL++ G G + + ++P L+ V+KETLRLHP + +L+ R A + ++ G +
Sbjct: 282 VIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIH 340
Query: 384 KGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLA 443
+G V + R + +P+ F P R+ + + IPFGAGR C G A
Sbjct: 341 EGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFA 400
Query: 444 IRMLHLMLGSLIKSFDWKLESKVTTENMDMEEKFGITLQKAQP 486
I + + L++ +++++ + D + + +Q AQP
Sbjct: 401 IMQIKAIFSVLLREYEFEMAQPPESYRNDHSK---MVVQLAQP 440
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 196/458 (42%), Gaps = 41/458 (8%)
Query: 49 HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSSHQ 108
HK H + +GPI K+G V +V + + + +P V+ HQ
Sbjct: 32 HKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQ 91
Query: 109 KGEYGIP-WLPASTQWKKLRKICNLHIFTSQK-------LDANQDLRRKKIQQLVAFVQE 160
+ I L S WKK R N + + LDA + R + L +++
Sbjct: 92 YYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDA---VSRDFVSVLHRRIKK 148
Query: 161 SCHAGEAIDIGQAAFDTAVNLLSNTIFSVD---LADPNSASAREFKNLMWGLMVESGKPN 217
+ + DI F A ++N IF L + + A+ F + ++ M + P
Sbjct: 149 AGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQ-MFHTSVPM 207
Query: 218 VS---DFFPMLRKLDIQGVRRRLSRHHIKILEVL----DRFIYQRLKQRQEHGFVGSKDM 270
++ D F + R + + H+ +V+ D + + ++ G V D
Sbjct: 208 LNLPPDLFRLFRT--------KTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSV-HHDY 258
Query: 271 LDTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEK 330
L + K+ D K ++ A G +TTS TL+W L E+ + + R+E+
Sbjct: 259 RGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLA 318
Query: 331 QIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLV 390
+ + + +P L+A +KETLRLHP + + + R D+ + +++P V V
Sbjct: 319 ARHQAQGDMATMLQLVPLLKASIKETLRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQV 377
Query: 391 NAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLM 450
+A+GR+ + + +P +F P R+L D ++ F + FG G R C G +A + +
Sbjct: 378 AIYALGREPTFFFDPENFDPTRWLSKDKNIT--YFRNLGFGWGVRQCLGRRIAELEMTIF 435
Query: 451 LGSLIKSFDWKLESKVTTENM-DMEEKFGITLQKAQPL 487
L +++++F +V +++ D+ F + L +P+
Sbjct: 436 LINMLENF------RVEIQHLSDVGTTFNLILMPEKPI 467
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 116/233 (49%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 257
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ AG ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 258 QIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 316
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 317 MVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R CPG A+ L+LG ++K FD++
Sbjct: 376 RPERFENPSA-IPQHAFK--PFGNGQRACPGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 182/443 (41%), Gaps = 31/443 (6%)
Query: 27 GSIKLPPGP-TPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAK 85
+K PP +P P +G+ G P + L + + +GP+ S + T + + A
Sbjct: 8 AGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAA 67
Query: 86 QVLQDHDAALCNRNVPDSVSSHQKGE---YGIPWLPASTQWKKLRKICNLHIFTSQKLDA 142
+ + L +V +++ G+ Y +P Q K L+ N+ F
Sbjct: 68 LLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQ----- 122
Query: 143 NQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSASAREF 202
+ + K+ ++ ES + + TA + L L N A+ +
Sbjct: 123 HVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCLHGKEIRSQL---NEKVAQLY 179
Query: 203 KNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQRLKQRQEH 262
+L + G + + P L + RRR R H +I ++ + I Q+ +Q QE
Sbjct: 180 ADL------DGGFSHAAWLLPGW--LPLPSFRRR-DRAHREIKDIFYKAI-QKRRQSQEK 229
Query: 263 GFVGSKDMLDTLLNIS--ESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEA 320
D+L TLL+ + + + ++ + + L AG T+S+T W L
Sbjct: 230 ----IDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTL 285
Query: 321 LSKARSELEKQIGKG-NPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISG 379
K E + G+ P+ + L L +KETLRL P + +++ R A ++G
Sbjct: 286 QKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMM-RMARTPQTVAG 344
Query: 380 FIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPG 439
+ +P G QV V+ R +W F P+R+L D G F +PFGAGR C G
Sbjct: 345 YTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQ-DNPASGEKFAYVPFGAGRHRCIG 403
Query: 440 LPLAIRMLHLMLGSLIKSFDWKL 462
A + + ++++ +++ L
Sbjct: 404 ENFAYVQIKTIWSTMLRLYEFDL 426
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 13/190 (6%)
Query: 252 IYQRLKQRQEHGFVG--SKDMLDTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTLEW 309
IYQ L + + G ++ +L L++ E I N ++L A +TT+ L
Sbjct: 248 IYQELAFNRPQHYTGIVAELLLKAELSL---EAIKANS-----MELTAGSVDTTAFPLLM 299
Query: 310 ALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPR 369
L EL +P+ R E + + LP L+A +KETLRL+P V L + R
Sbjct: 300 TLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAALKETLRLYP-VGLFLER 358
Query: 370 KASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIP 429
S D+ + + +P G V V +++GR+A+ + P + P+R+L D+ GRNF +P
Sbjct: 359 VVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWL--DIRGSGRNFHHVP 416
Query: 430 FGAGRRICPG 439
FG G R C G
Sbjct: 417 FGFGMRQCLG 426
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 116/233 (49%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 205 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 259
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ AG ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 260 QIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 318
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P VP A D + G + + KG +++V + RD + W ++ F
Sbjct: 319 MVLNEALRLWPTVPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 377
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 378 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 193/458 (42%), Gaps = 58/458 (12%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 1 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKE 60
Query: 87 VLQDHDAALCNRNV---PDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQKLDAN 143
D + ++N+ P V W WKK I L F+ Q +
Sbjct: 61 AC---DESRFDKNLSQAPKFVRDFAGDGLFTSWT-HEKNWKKAHNIL-LPSFSQQAMKGY 115
Query: 144 QDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSASAREFK 203
+ QLV E +A E I++ + ++ T+ ++ L F
Sbjct: 116 HAMMVDIAVQLVQ-KWERLNADEHIEVPE-------DMTRLTLDTIGLCG--------FN 159
Query: 204 NLMWGLMVESGKPNVSDFFPMLRKLD--IQGVRR------------RLSRHHIKIL-EVL 248
+ P ++ M+R LD + +RR R + IK++ +++
Sbjct: 160 YRFNSFYRDQPHPFITS---MVRALDEAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLV 216
Query: 249 DRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSS 305
D+ I R ++ S D+L +LN + E +D + ++ + AAG E TS
Sbjct: 217 DKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSG 271
Query: 306 TLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPL 365
L +AL LV +P L KA E + + P + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHELQKAAEEAARVLVDPVPSYKQ-VKQLKYVGMVLNEALRLWPTAPA 330
Query: 366 LIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGR 423
A D + G + + KG +++V + RD + W ++ F+PERF +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQH 388
Query: 424 NFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 389 AFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/456 (22%), Positives = 187/456 (41%), Gaps = 51/456 (11%)
Query: 25 SRGSIKLPP-GPTPWPIIGNLPQLGHKPHKSLADLAK-VHGPIMSLKIGQVTTVVISSAS 82
+ G KLPP P P +G++ Q G P + + + + + ++ IG ++
Sbjct: 2 TSGKGKLPPVYPVTVPFLGHIVQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPH 61
Query: 83 MAKQVLQDHDAALCNRNVPDSVSSHQKGE---YGIPWLPASTQWKKLRKICNLHIFTSQK 139
+ + L R V ++ + GE Y P+ Q L + + F +
Sbjct: 62 EHSRFFSPRNEILSPREV-YTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFV 120
Query: 140 LDANQDLRRKKIQQLVAFVQESCHAGEAI-----DIGQAAFDTAVNLLSNTIFSVDLADP 194
++R+ F+ E+ E + D G +TA L F DL
Sbjct: 121 PAIQHEVRK--------FMAENWKEDEGVINLLEDCGAMIINTACQCL----FGEDLR-- 166
Query: 195 NSASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDI-QGVRRRLSRHHIKILEVLDRFIY 253
+AR F L+ + ES + F P L +L + Q R R +R ++ ++L I
Sbjct: 167 KRLNARHFAQLLSKM--ESSLIPAAVFMPWLLRLPLPQSARCREARAELQ--KILGEIIV 222
Query: 254 QRLKQRQEHGFVGSKDMLDTLLN--ISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWAL 311
R K+ + D+L LL + ++ ++ + + AG T++ T W++
Sbjct: 223 AREKEEASKD-NNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSM 281
Query: 312 TELVHSP-----EALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLL 366
L+H + L K E Q+ N M+E +P+ + V+E++R P + L+
Sbjct: 282 LHLMHPKNKKWLDKLHKEIDEFPAQLNYDNVMDE-----MPFAERCVRESIRRDPPL-LM 335
Query: 367 IPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFE 426
+ R +V++ ++VPKG + + D + NP + PER D V G
Sbjct: 336 VMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER----DEKVDG---A 388
Query: 427 LIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKL 462
I FGAG C G A+ + +L + + +D++L
Sbjct: 389 FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 424
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 193/454 (42%), Gaps = 50/454 (11%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 1 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKE 60
Query: 87 VLQDHDAALCNRNVPDSVSSHQK----GEYGIPWLPASTQWKKLRKICNLHIFTSQKLDA 142
D + ++N+ ++ + GE+ W WKK I L F+ Q +
Sbjct: 61 AC---DESRFDKNLSQALKFVRDFAGDGEF-TSWT-HEKNWKKAHNIL-LPSFSQQAMKG 114
Query: 143 NQDLRRKKIQQLVAFVQESCHAGEAI----DIGQAAFDT----AVNLLSNTIFSVDLADP 194
+ QLV E +A E I D+ + DT N N+ + D P
Sbjct: 115 YHAMMVDIAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYR-DQPHP 172
Query: 195 NSAS-AREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL-EVLDRFI 252
S R M L + P+ + +R + IK++ +++D+ I
Sbjct: 173 FITSMVRALDEAMNKL--QRANPDDPAY----------DENKRQFQEDIKVMNDLVDKII 220
Query: 253 YQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSSTLEW 309
R ++ S D+L +LN + E +D + ++ + AG ETTS L +
Sbjct: 221 ADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSF 275
Query: 310 ALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPR 369
AL LV +P L KA E + + P + + +L Y+ V+ E LRL P P
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVGMVLNEALRLWPTAPAF-SL 333
Query: 370 KASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGRNFEL 427
A D + G + + KG +++V + RD + W ++ F+PERF + F+
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK- 391
Query: 428 IPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
PFG G+R C G A+ L+LG ++K FD++
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 193/458 (42%), Gaps = 58/458 (12%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 2 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKE 61
Query: 87 VLQDHDAALCNRNV---PDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQKLDAN 143
D + ++N+ P V W WKK I L F+ Q +
Sbjct: 62 AC---DESRFDKNLSQAPKFVRDLAGDGLFTSWT-HEKNWKKAHNIL-LPSFSQQAMKGY 116
Query: 144 QDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSASAREFK 203
+ QLV E +A E I++ + ++ T+ ++ L F
Sbjct: 117 HAMMVDIAVQLVQ-KWERLNADEHIEVPE-------DMTRLTLDTIGLCG--------FN 160
Query: 204 NLMWGLMVESGKPNVSDFFPMLRKLD--IQGVRR------------RLSRHHIKIL-EVL 248
+ P ++ M+R LD + +RR R + IK++ +++
Sbjct: 161 YRFNSFYRDQPHPFITS---MVRALDEAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLV 217
Query: 249 DRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSS 305
D+ I R ++ S D+L +LN + E +D + ++ + AAG E TS
Sbjct: 218 DKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSG 272
Query: 306 TLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPL 365
L +AL LV +P L KA E + + P + + +L Y+ V+ E LRL P P
Sbjct: 273 LLSFALYFLVKNPHELQKAAEEAARVLVDPVPSHKQ-VKQLKYVGMVLNEALRLWPTAPA 331
Query: 366 LIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGR 423
A D + G + + KG +++V + RD + W ++ F+PERF +
Sbjct: 332 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSA-IPQH 389
Query: 424 NFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 390 AFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 193/451 (42%), Gaps = 44/451 (9%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 1 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKE 60
Query: 87 VLQDHDAALCNRNVPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHI--FTSQKLDANQ 144
D + ++N+ ++ + +G + T K +K N+ + F+ Q +
Sbjct: 61 AC---DESRFDKNLSQALK-FVRDFFGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH 116
Query: 145 DLRRKKIQQLVAFVQESCHAGEAI----DIGQAAFDT----AVNLLSNTIFSVDLADPNS 196
+ QLV E +A E I D+ + DT N N+ + +
Sbjct: 117 AMMVDIAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFIT 175
Query: 197 ASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL-EVLDRFIYQR 255
+ R M L + P+ + +R + IK++ +++D+ I R
Sbjct: 176 SMVRALDEAMNKL--QRANPDDPAY----------DENKRQFQEDIKVMNDLVDKIIADR 223
Query: 256 LKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSSTLEWALT 312
++ S D+L +LN + E +D + ++ + AG ETTS L +AL
Sbjct: 224 KASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALY 278
Query: 313 ELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKAS 372
LV +P L KA E + + P + + +L Y+ V+ E LRL P P A
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVGMVLNEALRLWPTAPAF-SLYAK 336
Query: 373 VDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGRNFELIPF 430
D + G + + KG +++V + RD + W ++ F+PERF + F+ PF
Sbjct: 337 EDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK--PF 393
Query: 431 GAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
G G+R C G A+ L+LG ++K FD++
Sbjct: 394 GNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 189/453 (41%), Gaps = 48/453 (10%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 1 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKE 60
Query: 87 VLQDHDAALCNRNVPDS---VSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQKLDAN 143
D + ++N+ + V W WKK I L F+ Q +
Sbjct: 61 AC---DESRFDKNLSQALKFVRDFAGDGLATSWT-HEKNWKKAHNIL-LPSFSQQAMKGY 115
Query: 144 QDLRRKKIQQLVAFVQESCHAGEAI----DIGQAAFDT----AVNLLSNTIFSVDLADPN 195
+ QLV E +A E I D+ + DT N N+ + D P
Sbjct: 116 HAMMVDIAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYR-DQPHPF 173
Query: 196 SAS-AREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL-EVLDRFIY 253
S R M L + P+ + +R + IK++ +++D+ I
Sbjct: 174 ITSMVRALDEAMNKL--QRANPDDPAY----------DENKRQFQEDIKVMNDLVDKIIA 221
Query: 254 QRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSSTLEWA 310
R ++ S D+L +LN + E +D + ++ + AG ETTS L +A
Sbjct: 222 DRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 276
Query: 311 LTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRK 370
L LV +P L KA E + + P + + +L Y+ V+ E LRL P P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVGMVLNEALRLWPTAPAF-SLY 334
Query: 371 ASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGRNFELI 428
A D + G + + KG +++V + RD + W ++ F+PERF + F+
Sbjct: 335 AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK-- 391
Query: 429 PFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
PFG G+R C G A+ L+LG ++K FD++
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 256
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ AG ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 257 QIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 315
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 316 MVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 375 RPERFENPSA-IPQHAFK--PFGNGQRACEGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 196/467 (41%), Gaps = 51/467 (10%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T ISS + K+
Sbjct: 2 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYISSQRLVKE 61
Query: 87 VLQDHDAALCNRNVPDS---VSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQKLDAN 143
D + ++N+ + V W WKK R I L + Q +
Sbjct: 62 AC---DESRFDKNLSQARKFVRDFAGDGLATSWT-HEKNWKKARNIL-LPRLSQQAMKGY 116
Query: 144 QDLRRKKIQQLVAFVQESCHAGEAI----DIGQAAFDT----AVNLLSNTIFSVDLADPN 195
+ QLV E ++ E I D+ + DT N N+ + D P
Sbjct: 117 HAMMVDIAVQLVQ-KWERLNSDEHIEVPEDMTRLTLDTIGLCGFNYRINSFYR-DQPHPF 174
Query: 196 SAS-AREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL-EVLDRFIY 253
S R +M L + P+ + +R + IK++ +++D+ I
Sbjct: 175 ITSMVRALDEVMNKL--QRANPDDPAY----------DENKRQFQEDIKVMNDLVDKIIA 222
Query: 254 QRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSSTLEWA 310
R ++ S D+L +L+ + E +D + ++ + AG ETTS L +A
Sbjct: 223 DRKASGEQ-----SDDLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFA 277
Query: 311 LTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRK 370
L LV +P L KA E + + P + + +L Y+ V+ E LR+ P P
Sbjct: 278 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVGMVLNEALRIWPTAPAF-SLY 335
Query: 371 ASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGRNFELI 428
A D + G + + KG +++V + RD + W ++ F+PERF + F+
Sbjct: 336 AKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSA-IPQHAFK-- 392
Query: 429 PFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDMEE 475
PFG G+R C G A+ L+LG ++K FD++ T +D+EE
Sbjct: 393 PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIEE 436
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 191/452 (42%), Gaps = 46/452 (10%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 1 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKE 60
Query: 87 VLQDHDAALCNRNVPDSVSSHQK--GEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQ 144
D + ++N+ ++ + G+ WKK I L F+ Q +
Sbjct: 61 AC---DESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYH 116
Query: 145 DLRRKKIQQLVAFVQESCHAGEAI----DIGQAAFDT----AVNLLSNTIFSVDLADPNS 196
+ QLV E +A E I D+ + DT N N+ + D P
Sbjct: 117 AMMVDIAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYR-DQPHPFI 174
Query: 197 AS-AREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL-EVLDRFIYQ 254
S R M L + P+ + +R + IK++ +++D+ I
Sbjct: 175 TSMVRALDEAMNKL--QRANPDDPAY----------DENKRQFQEDIKVMNDLVDKIIAD 222
Query: 255 RLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSSTLEWAL 311
R ++ S D+L +LN + E +D + ++ + AG ETTS L +AL
Sbjct: 223 RKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 312 TELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKA 371
LV +P L KA E + + P + + +L Y+ V+ E LRL P P A
Sbjct: 278 YFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVGMVLNEALRLWPTAPAF-SLYA 335
Query: 372 SVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGRNFELIP 429
D + G + + KG +++V + RD + W ++ F+PERF + F+ P
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK--P 392
Query: 430 FGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
FG G+R C G A+ L+LG ++K FD++
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 191/451 (42%), Gaps = 44/451 (9%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 2 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKE 61
Query: 87 VLQDHDAALCNRNVPDSVSSHQK--GEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQ 144
D + ++N+ ++ + G+ + WKK I L F+ Q +
Sbjct: 62 AC---DESRFDKNLSQALKFVRDFAGDGLLTSWTHEKNWKKAHNIL-LPSFSQQAMKGYH 117
Query: 145 DLRRKKIQQLVAFVQESCHAGEAI----DIGQAAFDT----AVNLLSNTIFSVDLADPNS 196
+ QLV E +A E I D+ + DT N N+ + +
Sbjct: 118 AMMVDIAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFIT 176
Query: 197 ASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL-EVLDRFIYQR 255
+ R M L + P+ + +R + IK++ +++D+ I R
Sbjct: 177 SMVRALDEAMNKL--QRANPDDPAY----------DENKRQFQEDIKVMNDLVDKIIADR 224
Query: 256 LKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSSTLEWALT 312
++ S D+L +LN + E +D + ++ + AG E+TS L +AL
Sbjct: 225 KASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALY 279
Query: 313 ELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKAS 372
LV +P L KA E + + P + + +L Y+ V+ E LRL P P A
Sbjct: 280 FLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVGMVLNEALRLWPTAPAF-SLYAK 337
Query: 373 VDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGRNFELIPF 430
D + G + + KG +++V + RD + W ++ F+PERF + F+ PF
Sbjct: 338 EDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK--PF 394
Query: 431 GAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
G G+R C G A+ L+LG ++K FD++
Sbjct: 395 GNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 190/452 (42%), Gaps = 46/452 (10%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 1 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKE 60
Query: 87 VLQDHDAALCNRNVPDSVSSHQK--GEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQ 144
D + ++N+ ++ + G+ WKK I L F+ Q +
Sbjct: 61 AC---DESRFDKNLSQALKFARDFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYH 116
Query: 145 DLRRKKIQQLVAFVQESCHAGEAI----DIGQAAFDT----AVNLLSNTIFSVDLADPNS 196
+ QLV E +A E I D+ + DT N N+ + D P
Sbjct: 117 AMMVDIAVQLVQ-KWERLNADEYIEVPEDMTRLTLDTIGLCGFNYRFNSFYR-DQPHPFI 174
Query: 197 ASA-REFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL-EVLDRFIYQ 254
S R +M L + P+ + +R + IK++ +++D+ I
Sbjct: 175 ISMIRALDEVMNKL--QRANPDDPAY----------DENKRQFQEDIKVMNDLVDKIIAD 222
Query: 255 RLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSSTLEWAL 311
R ++ S D+L +LN + E +D + + + AG ETTS L +AL
Sbjct: 223 RKASGEQ-----SDDLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFAL 277
Query: 312 TELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKA 371
LV +P L K E + + P + + +L Y+ V+ E LRL P P A
Sbjct: 278 YFLVKNPHVLQKVAEEATRVLVDPVPSYKQ-VKQLKYVGMVLNEALRLWPTAPAF-SLYA 335
Query: 372 SVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGRNFELIP 429
D + G + + KG +V+V + RD + W ++ F+PERF + F+ P
Sbjct: 336 KEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK--P 392
Query: 430 FGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
FG G+R C G A+ L+LG ++K FD++
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 190/451 (42%), Gaps = 44/451 (9%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 1 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKE 60
Query: 87 VLQDHDAALCNRNVPDSVSSHQK--GEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQ 144
D + ++N+ ++ + G+ WKK I L F+ Q +
Sbjct: 61 AC---DESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYH 116
Query: 145 DLRRKKIQQLVAFVQESCHAGEAI----DIGQAAFDT----AVNLLSNTIFSVDLADPNS 196
+ QLV E +A E I D+ + DT N N+ + +
Sbjct: 117 AMMVDIAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFIT 175
Query: 197 ASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL-EVLDRFIYQR 255
+ R M L + P+ + +R + IK++ +++D+ I R
Sbjct: 176 SMVRALDEAMNKL--QRANPDDPAY----------DENKRQFQEDIKVMNDLVDKIIADR 223
Query: 256 LKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSSTLEWALT 312
++ S D+L +LN + E +D + ++ + AG ETTS L +AL
Sbjct: 224 KASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALY 278
Query: 313 ELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKAS 372
LV +P L KA E + + P + + +L Y+ V+ E LRL P P A
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVGMVLNEALRLWPTAPAF-SLYAK 336
Query: 373 VDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGRNFELIPF 430
D + G + + KG +++V + RD + W ++ F+PERF + F+ PF
Sbjct: 337 EDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK--PF 393
Query: 431 GAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
G G+R C G A+ L+LG ++K FD++
Sbjct: 394 GNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 191/451 (42%), Gaps = 44/451 (9%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 1 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKE 60
Query: 87 VLQDHDAALCNRNVPDSVSSHQK--GEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQ 144
D + ++N+ ++ + G+ + WKK I L F+ Q +
Sbjct: 61 AC---DESRFDKNLSQALKFVRDFAGDGLLTSWTHEKNWKKAHNIL-LPSFSQQAMKGYH 116
Query: 145 DLRRKKIQQLVAFVQESCHAGEAI----DIGQAAFDT----AVNLLSNTIFSVDLADPNS 196
+ QLV E +A E I D+ + DT N N+ + +
Sbjct: 117 AMMVDIAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFIT 175
Query: 197 ASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL-EVLDRFIYQR 255
+ R M L + P+ + +R + IK++ +++D+ I R
Sbjct: 176 SMVRALDEAMNKL--QRANPDDPAY----------DENKRQFQEDIKVMNDLVDKIIADR 223
Query: 256 LKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSSTLEWALT 312
++ S D+L +LN + E +D + ++ + AG E+TS L +AL
Sbjct: 224 KASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALY 278
Query: 313 ELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKAS 372
LV +P L KA E + + P + + +L Y+ V+ E LRL P P A
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVGMVLNEALRLWPTAPAF-SLYAK 336
Query: 373 VDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGRNFELIPF 430
D + G + + KG +++V + RD + W ++ F+PERF + F+ PF
Sbjct: 337 EDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK--PF 393
Query: 431 GAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
G G+R C G A+ L+LG ++K FD++
Sbjct: 394 GNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 205 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 259
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ AG ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 260 QIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 318
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 319 MVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 377
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 378 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 191/451 (42%), Gaps = 44/451 (9%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 1 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKE 60
Query: 87 VLQDHDAALCNRNVPDSVSSHQK--GEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQ 144
D + ++N+ ++ + G+ + WKK I L F+ Q +
Sbjct: 61 AC---DESRFDKNLSQALKFVRDFAGDGLLTSWTHEKNWKKAHNIL-LPSFSQQAMKGYH 116
Query: 145 DLRRKKIQQLVAFVQESCHAGEAI----DIGQAAFDT----AVNLLSNTIFSVDLADPNS 196
+ QLV E +A E I D+ + DT N N+ + +
Sbjct: 117 AMMVDIAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFIT 175
Query: 197 ASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL-EVLDRFIYQR 255
+ R M L + P+ + +R + IK++ +++D+ I R
Sbjct: 176 SMVRALDEAMNKL--QRANPDDPAY----------DENKRQFQEDIKVMNDLVDKIIADR 223
Query: 256 LKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSSTLEWALT 312
++ S D+L +LN + E +D + ++ + AG E+TS L +AL
Sbjct: 224 KASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALY 278
Query: 313 ELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKAS 372
LV +P L KA E + + P + + +L Y+ V+ E LRL P P A
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVGMVLNEALRLWPTAPAF-SLYAK 336
Query: 373 VDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGRNFELIPF 430
D + G + + KG +++V + RD + W ++ F+PERF + F+ PF
Sbjct: 337 EDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK--PF 393
Query: 431 GAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
G G+R C G A+ L+LG ++K FD++
Sbjct: 394 GNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 257
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ AG ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 258 QIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 316
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 317 MVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 376 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 256
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ AG ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 257 QIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 315
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 316 MVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 375 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 256
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ AG ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 257 QIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 315
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 316 MVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 375 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 257
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ AG ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 258 QIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 316
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 317 MVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 376 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 256
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ AG ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 257 QIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 315
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 316 MVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 375 RPERFENPSA-IPQHAFK--PFGNGQRACIGKQFALHEATLVLGMMLKHFDFE 424
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 190/447 (42%), Gaps = 43/447 (9%)
Query: 30 KLPP---GPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
KLPP G TP+ +G++ Q G P + K +G I ++ I V+ +
Sbjct: 3 KLPPVVHGTTPF--VGHIIQFGKDPLGFMLKAKKKYGGIFTMNICGNRITVVGDVHQHSK 60
Query: 87 VLQDHDAALCNRNVPD-SVSSHQKG-EYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQ 144
+ L R V V +G Y P+ Q L + + F +
Sbjct: 61 FFTPRNEILSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTVAKFQNFAPSIQH 120
Query: 145 DLRRKKIQQLVAFVQESCHAGEA-IDIGQAAFDTAVNLLSNTIFSVDLADPNSASAREFK 203
++R+ F++ + + E I+I +N +F DL AR+F
Sbjct: 121 EVRK--------FMKANWNKDEGEINILDDCSAMIINTACQCLFGEDLR--KRLDARQFA 170
Query: 204 NLMWGLMVESGKPNVSDFFPMLRKLDI-QGVRRRLSRHHIKILEVLDRFIYQRLKQRQEH 262
L+ + ES + F P + KL + Q R R +R ++ ++L I R K+ +
Sbjct: 171 QLLAKM--ESCLIPAAVFLPWILKLPLPQSYRCRDARAELQ--DILSEIIIAREKEEAQK 226
Query: 263 GFVGSKDMLDTLLN--ISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELV--HSP 318
+ D+L LL + ++ +++ + + AG T++ T W+L L+ +
Sbjct: 227 D-TNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNK 285
Query: 319 EALSKARSELEK---QIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDV 375
L+K E+++ Q+ N MEE +P+ + +E++R P + +L+ RK V
Sbjct: 286 RHLAKLHQEIDEFPAQLNYDNVMEE-----MPFAEQCARESIRRDPPLVMLM-RKVLKPV 339
Query: 376 QISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRR 435
Q+ ++VP+G + + +D + NP + PER + L V G FGAG
Sbjct: 340 QVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPERNMKL---VDG---AFCGFGAGVH 393
Query: 436 ICPGLPLAIRMLHLMLGSLIKSFDWKL 462
C G + + +L ++++ +D++L
Sbjct: 394 KCIGEKFGLLQVKTVLATVLRDYDFEL 420
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 205 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 259
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ AG ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 260 QIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 318
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 319 MVLNEALRLWPTSPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 377
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 378 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 257
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ AAG E TS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 258 QIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 316
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 317 MVLNEALRLWPTGPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 376 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 256
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ AAG E TS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 257 QIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 315
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 316 MVLNEALRLWPTGPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 375 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 257
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ AG ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 258 QIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 316
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 317 MVLNEALRLWPTAPPF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 376 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 191/452 (42%), Gaps = 46/452 (10%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 1 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKE 60
Query: 87 VLQDHDAALCNRNVPDSVSSHQK--GEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQ 144
D + ++N+ ++ + G+ WKK I L F+ Q +
Sbjct: 61 AC---DESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYH 116
Query: 145 DLRRKKIQQLVAFVQESCHAGEAI----DIGQAAFDT----AVNLLSNTIFSVDLADPNS 196
+ QLV E +A E I D+ + DT N N+ + D P
Sbjct: 117 AMMVDIAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYR-DQPHPFI 174
Query: 197 AS-AREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL-EVLDRFIYQ 254
S R M L + P+ + +R + IK++ +++D+ I
Sbjct: 175 TSMVRALDEAMNKL--QRANPDDPAY----------DENKRQFQEDIKVMNDLVDKIIAD 222
Query: 255 RLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSSTLEWAL 311
R ++ S D+L +LN + E +D + ++ + AG ETTS L +AL
Sbjct: 223 RKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 312 TELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKA 371
LV +P L KA E + + P + + +L Y+ V+ E LRL P P A
Sbjct: 278 YFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVGMVLNEALRLWPTAPAF-SLYA 335
Query: 372 SVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGRNFELIP 429
D + G + + KG +++V + RD + W ++ F+PERF + F+ P
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK--P 392
Query: 430 FGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+G G+R C G A+ L+LG ++K FD++
Sbjct: 393 YGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 188/453 (41%), Gaps = 48/453 (10%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 1 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKE 60
Query: 87 VLQDHDAALCNRNVPDS---VSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQKLDAN 143
D + ++N+ + V W WKK I L F+ Q +
Sbjct: 61 AC---DESRFDKNLSQALKFVRDFAGDGLATSWT-HEKNWKKAHNIL-LPSFSQQAMKGY 115
Query: 144 QDLRRKKIQQLVAFVQESCHAGEAI----DIGQAAFDT----AVNLLSNTIFSVDLADPN 195
+ QLV E +A E I D+ + DT N N+ + D P
Sbjct: 116 HAMMVDIAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYR-DQPHPF 173
Query: 196 SAS-AREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL-EVLDRFIY 253
S R M L + P+ + +R + IK++ +++D+ I
Sbjct: 174 ITSMVRALDEAMNKL--QRANPDDPAY----------DENKRQFQEDIKVMNDLVDKIIA 221
Query: 254 QRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSSTLEWA 310
R ++ S D+L +LN + E +D + ++ + AG E TS L +A
Sbjct: 222 DRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFA 276
Query: 311 LTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRK 370
L LV +P L KA E + + P + + +L Y+ V+ E LRL P P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVGMVLNEALRLWPTAPAF-SLY 334
Query: 371 ASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGRNFELI 428
A D + G + + KG +++V + RD + W ++ F+PERF + F+
Sbjct: 335 AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK-- 391
Query: 429 PFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
PFG G+R C G A+ L+LG ++K FD++
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 256
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ AG ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 257 QIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 315
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 316 MVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 375 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 256
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ G ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 257 QIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 315
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 316 MVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 375 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 189/451 (41%), Gaps = 44/451 (9%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 1 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKE 60
Query: 87 VLQDHDAALCNRNVPDSVSSHQK--GEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQ 144
D + ++N+ ++ + G+ WKK I L F+ Q +
Sbjct: 61 AC---DESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYH 116
Query: 145 DLRRKKIQQLVAFVQESCHAGEAI----DIGQAAFDT----AVNLLSNTIFSVDLADPNS 196
+ QLV E +A E I D+ + DT N N+ + +
Sbjct: 117 AMMVDIAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFIT 175
Query: 197 ASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL-EVLDRFIYQR 255
+ R M L + P+ + +R + IK++ +++D+ I R
Sbjct: 176 SMVRALDEAMNKL--QRANPDDPAY----------DENKRQFQEDIKVMNDLVDKIIADR 223
Query: 256 LKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSSTLEWALT 312
++ S D+L +LN + E +D + ++ + AG E TS L +AL
Sbjct: 224 KASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALY 278
Query: 313 ELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKAS 372
LV +P L KA E + + P + + +L Y+ V+ E LRL P P A
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVGMVLNEALRLWPTAPAF-SLYAK 336
Query: 373 VDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGRNFELIPF 430
D + G + + KG +++V + RD + W ++ F+PERF + F+ PF
Sbjct: 337 EDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK--PF 393
Query: 431 GAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
G G+R C G A+ L+LG ++K FD++
Sbjct: 394 GNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 190/452 (42%), Gaps = 46/452 (10%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 1 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKE 60
Query: 87 VLQDHDAALCNRNVPDSVSSHQK--GEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQ 144
D + ++N+ ++ + G+ WKK I L F+ Q +
Sbjct: 61 AC---DESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYH 116
Query: 145 DLRRKKIQQLVAFVQESCHAGEAI----DIGQAAFDT----AVNLLSNTIFSVDLADPNS 196
+ QLV E +A E I D+ + DT N N+ + D P
Sbjct: 117 AMMVDIAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYR-DQPHPFI 174
Query: 197 AS-AREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL-EVLDRFIYQ 254
S R M L + P+ + +R + IK++ +++D+ I
Sbjct: 175 TSMVRALDEAMNKL--QRANPDDPAY----------DENKRQFQEDIKVMNDLVDKIIAD 222
Query: 255 RLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSSTLEWAL 311
R ++ S D+L +LN + E +D + ++ + AG E TS L +AL
Sbjct: 223 RKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFAL 277
Query: 312 TELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKA 371
LV +P L KA E + + P + + +L Y+ V+ E LRL P P A
Sbjct: 278 YFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVGMVLNEALRLWPTAPAF-SLYA 335
Query: 372 SVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGRNFELIP 429
D + G + + KG +++V + RD + W ++ F+PERF + F+ P
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK--P 392
Query: 430 FGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
FG G+R C G A+ L+LG ++K FD++
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 256
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ G ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 257 QIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 315
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 316 MVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 375 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 256
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ G ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 257 QIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 315
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 316 MVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 375 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 184/451 (40%), Gaps = 51/451 (11%)
Query: 30 KLPP-GPTPWPIIGNLPQLGHKPHKSLADLAK-VHGPIMSLKIGQVTTVVISSASMAKQV 87
K PP P P +G++ Q G P + + + + + ++ IG ++ +
Sbjct: 1 KTPPVYPVTVPFLGHIVQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEHSRF 60
Query: 88 LQDHDAALCNRNVPDSVSSHQKGE---YGIPWLPASTQWKKLRKICNLHIFTSQKLDANQ 144
+ L R V ++ + GE Y P+ Q L + + F +
Sbjct: 61 FSPRNEILSPREV-YTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQH 119
Query: 145 DLRRKKIQQLVAFVQESCHAGEAI-----DIGQAAFDTAVNLLSNTIFSVDLADPNSASA 199
++R+ F+ E+ E + D G +TA L F DL +A
Sbjct: 120 EVRK--------FMAENWKEDEGVINLLEDCGAMIINTACQCL----FGEDLR--KRLNA 165
Query: 200 REFKNLMWGLMVESGKPNVSDFFPMLRKLDI-QGVRRRLSRHHIKILEVLDRFIYQRLKQ 258
R F L+ + ES + F P L +L + Q R R +R ++ ++L I R K+
Sbjct: 166 RHFAQLLSKM--ESSLIPAAVFMPWLLRLPLPQSARCREARAELQ--KILGEIIVAREKE 221
Query: 259 RQEHGFVGSKDMLDTLLN--ISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVH 316
+ D+L LL + ++ ++ + + AG T++ T W++ L+H
Sbjct: 222 EASKD-NNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMH 280
Query: 317 SP-----EALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKA 371
+ L K E Q+ N M+E +P+ + V+E++R P + L++ R
Sbjct: 281 PKNKKWLDKLHKEIDEFPAQLNYDNVMDE-----MPFAERCVRESIRRDPPL-LMVMRMV 334
Query: 372 SVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFG 431
+V++ ++VPKG + + D + NP + PER D V G I FG
Sbjct: 335 KAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER----DEKVDG---AFIGFG 387
Query: 432 AGRRICPGLPLAIRMLHLMLGSLIKSFDWKL 462
AG C G A+ + +L + + +D++L
Sbjct: 388 AGVHKCIGQKFALLQVKTILATAFREYDFQL 418
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 256
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ G ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 257 QIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 315
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 316 MVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 375 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 256
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ AG E TS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 257 QIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 315
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 316 MVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 375 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 256
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ G ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 257 QIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 315
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 316 MVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 375 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +LN + E +D + ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRY 256
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ G ETTS L +AL LV +P L KA E + + P + + +L Y+
Sbjct: 257 QIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 315
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 316 MVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 375 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 190/451 (42%), Gaps = 44/451 (9%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 1 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKE 60
Query: 87 VLQDHDAALCNRNVPDSVSSHQK--GEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQ 144
D + ++N+ ++ + G+ WKK I L F+ Q +
Sbjct: 61 AC---DESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYH 116
Query: 145 DLRRKKIQQLVAFVQESCHAGEAI----DIGQAAFDT----AVNLLSNTIFSVDLADPNS 196
+ QLV E +A E I D+ + DT N N+ + +
Sbjct: 117 AMMVDIAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFIT 175
Query: 197 ASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL-EVLDRFIYQR 255
+ R M L + P+ + +R + IK++ +++D+ I R
Sbjct: 176 SMVRALDEAMNKL--QRANPDDPAY----------DENKRQFQEDIKVMNDLVDKIIADR 223
Query: 256 LKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSSTLEWALT 312
++ S D+L +LN + E +D + ++ + AG ETTS L +AL
Sbjct: 224 KASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALY 278
Query: 313 ELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKAS 372
LV +P L KA E + + P + + +L Y+ V+ E LRL P P A
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVGMVLNEALRLWPTAPAF-SLYAK 336
Query: 373 VDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGRNFELIPF 430
D + G + + KG +++V + RD + W ++ F+PERF + F+ P+
Sbjct: 337 EDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK--PW 393
Query: 431 GAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
G G+R C G A+ L+LG ++K FD++
Sbjct: 394 GNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 182/448 (40%), Gaps = 50/448 (11%)
Query: 32 PPGPTPWPIIGNLPQLGHKPHKSLADLAK-VHGPIMSLKIGQVTTVVISSASMAKQVLQD 90
P P P +G++ Q G P + + + + + ++ IG ++ +
Sbjct: 19 PVYPVTVPFLGHIVQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEHSRFFSP 78
Query: 91 HDAALCNRNVPDSVSSHQKGE---YGIPWLPASTQWKKLRKICNLHIFTSQKLDANQDLR 147
+ L R V ++ + GE Y P+ Q L + + F + ++R
Sbjct: 79 RNEILSPREV-YTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVR 137
Query: 148 RKKIQQLVAFVQESCHAGEAI-----DIGQAAFDTAVNLLSNTIFSVDLADPNSASAREF 202
+ F+ E+ E + D G +TA L F DL +AR F
Sbjct: 138 K--------FMAENWKEDEGVINLLEDCGAMIINTACQCL----FGEDLR--KRLNARHF 183
Query: 203 KNLMWGLMVESGKPNVSDFFPMLRKLDI-QGVRRRLSRHHIKILEVLDRFIYQRLKQRQE 261
L+ + ES + F P L +L + Q R R +R ++ ++L I R K+
Sbjct: 184 AQLLSKM--ESSLIPAAVFMPWLLRLPLPQSARCREARAELQ--KILGEIIVAREKEEAS 239
Query: 262 HGFVGSKDMLDTLLN--ISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSP- 318
+ D+L LL + ++ ++ + + AG T++ T W++ L+H
Sbjct: 240 KD-NNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKN 298
Query: 319 ----EALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVD 374
+ L K E Q+ N M+E +P+ + V+E++R P + L++ R +
Sbjct: 299 KKWLDKLHKEIDEFPAQLNYDNVMDE-----MPFAERCVRESIRRDPPL-LMVMRMVKAE 352
Query: 375 VQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGR 434
V++ ++VPKG + + D + NP + PER D V G I FGAG
Sbjct: 353 VKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER----DEKVDG---AFIGFGAGV 405
Query: 435 RICPGLPLAIRMLHLMLGSLIKSFDWKL 462
C G A+ + +L + + +D++L
Sbjct: 406 HKCIGQKFALLQVKTILATAFREYDFQL 433
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 190/452 (42%), Gaps = 46/452 (10%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 1 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKE 60
Query: 87 VLQDHDAALCNRNVPDSVSSHQK--GEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQ 144
D + ++N+ ++ + G+ WKK I L F+ Q +
Sbjct: 61 AC---DESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYH 116
Query: 145 DLRRKKIQQLVAFVQESCHAGEAI----DIGQAAFDT----AVNLLSNTIFSVDLADPNS 196
+ QLV E +A E I D+ + DT N N+ + D P
Sbjct: 117 AMMVDIAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYR-DQPHPFI 174
Query: 197 AS-AREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL-EVLDRFIYQ 254
S R M L + P+ + +R + IK++ +++D+ I
Sbjct: 175 TSMVRALDEAMNKL--QRANPDDPAY----------DENKRQFQEDIKVMNDLVDKIIAD 222
Query: 255 RLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSSTLEWAL 311
R ++ S D+L +LN + E +D + ++ + AG ETTS L +AL
Sbjct: 223 RKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 312 TELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKA 371
LV +P L KA E + + P + + +L Y+ V+ E LRL P P A
Sbjct: 278 YFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVGMVLNEALRLWPTAPAF-SLYA 335
Query: 372 SVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGRNFELIP 429
D + G + + KG +++V + RD + W ++ F+PERF + F+ P
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK--P 392
Query: 430 FGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
G G+R C G A+ L+LG ++K FD++
Sbjct: 393 HGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 190/452 (42%), Gaps = 46/452 (10%)
Query: 28 SIKLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQ 86
+IK P P + + NLP L KP ++L +A G I + T +SS + K+
Sbjct: 1 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKE 60
Query: 87 VLQDHDAALCNRNVPDSVSSHQK--GEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQ 144
D + ++N+ ++ + G+ WKK I L F+ Q +
Sbjct: 61 AC---DESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYH 116
Query: 145 DLRRKKIQQLVAFVQESCHAGEAI----DIGQAAFDT----AVNLLSNTIFSVDLADPNS 196
+ QLV E +A E I D+ + DT N N+ + D P
Sbjct: 117 AMMVDIAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYR-DQPHPFI 174
Query: 197 AS-AREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKIL-EVLDRFIYQ 254
S R M L + P+ + +R + IK++ +++D+ I
Sbjct: 175 TSMVRALDEAMNKL--QRANPDDPAY----------DENKRQFQEDIKVMNDLVDKIIAD 222
Query: 255 RLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKHLFLDLFAAGAETTSSTLEWAL 311
R ++ S D+L +LN + E +D + ++ + AG ETTS L +AL
Sbjct: 223 RKASGEQ-----SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 312 TELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKA 371
LV +P L KA E + + P + + +L Y+ V+ E LRL P P A
Sbjct: 278 YFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVGMVLNEALRLWPTAPAF-SLYA 335
Query: 372 SVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSFKPERFLGLDVDVKGRNFELIP 429
D + G + + KG +++V + RD + W ++ F+PERF + F+ P
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK--P 392
Query: 430 FGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
G G+R C G A+ L+LG ++K FD++
Sbjct: 393 AGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 16/233 (6%)
Query: 235 RRLSRHHIKIL-EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISE---SEKIDRNDFKH 290
+R + IK++ +++D+ I R ++ S D+L +L+ + E +D + ++
Sbjct: 208 KRQFQEDIKVMNDLVDKIIADRKASGEQ-----SDDLLTHMLHGKDPETGEPLDDENIRY 262
Query: 291 LFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQ 350
+ AG ETTS L + L LV +P L KA E + + P + + +L Y+
Sbjct: 263 QIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ-VKQLKYVG 321
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISG-FIVPKGAQVLVNAWAIGRDASTW-ENPYSF 408
V+ E LRL P P A D + G + + KG +++V + RD + W ++ F
Sbjct: 322 MVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEF 380
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
+PERF + F+ PFG G+R C G A+ L+LG ++K FD++
Sbjct: 381 RPERFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 430
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 179/453 (39%), Gaps = 55/453 (12%)
Query: 30 KLPP-GPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVL 88
KLPP P PI+G++ Q G P + + + LK G T ++
Sbjct: 4 KLPPVYPVTVPILGHIIQFGKSPLGFMQECKR------QLKSGIFTINIVGKRVTIVGDP 57
Query: 89 QDHDAALCNRN---VPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQD 145
+H RN P V S +G + + + ++R+ N ++
Sbjct: 58 HEHSRFFLPRNEVLSPREVYSFMVPVFG-EGVAYAAPYPRMREQLNF---------LAEE 107
Query: 146 LRRKKIQQLVAFVQESCHAGEA---------IDIGQAAFDTAVNLLSNTIFSVDLADPNS 196
L K Q V +Q A I++ + +N +F DL
Sbjct: 108 LTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLR--KR 165
Query: 197 ASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQRL 256
AR F L+ M S P +L+ Q R +R ++ ++L I R
Sbjct: 166 LDARRFAQLL-AKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQ--KILSEIIIAR- 221
Query: 257 KQRQEHGFVGSKDMLDTLLN--ISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTEL 314
K+ + + + D+L LL+ + + ++ + + AG T+S T W++ L
Sbjct: 222 KEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL 281
Query: 315 VHSP-----EALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPR 369
+H EAL K E Q+ N M+E +P+ + +E++R P + L++ R
Sbjct: 282 MHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL-LMLMR 335
Query: 370 KASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIP 429
K DV++ ++VPKG + + D + P + PER D V+G I
Sbjct: 336 KVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER----DEKVEG---AFIG 388
Query: 430 FGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKL 462
FGAG C G + + +L + +S+D++L
Sbjct: 389 FGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 421
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 179/453 (39%), Gaps = 55/453 (12%)
Query: 30 KLPP-GPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVL 88
KLPP P PI+G++ Q G P + + + LK G T ++
Sbjct: 2 KLPPVYPVTVPILGHIIQFGKSPLGFMQECKR------QLKSGIFTINIVGKRVTIVGDP 55
Query: 89 QDHDAALCNRN---VPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQD 145
+H RN P V S +G + + + ++R+ N ++
Sbjct: 56 HEHSRFFLPRNEVLSPREVYSFMVPVFG-EGVAYAAPYPRMREQLNF---------LAEE 105
Query: 146 LRRKKIQQLVAFVQESCHAGEA---------IDIGQAAFDTAVNLLSNTIFSVDLADPNS 196
L K Q V +Q A I++ + +N +F DL
Sbjct: 106 LTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLR--KR 163
Query: 197 ASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQRL 256
AR F L+ M S P +L+ Q R +R ++ ++L I R
Sbjct: 164 LDARRFAQLL-AKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQ--KILSEIIIAR- 219
Query: 257 KQRQEHGFVGSKDMLDTLLN--ISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTEL 314
K+ + + + D+L LL+ + + ++ + + AG T+S T W++ L
Sbjct: 220 KEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL 279
Query: 315 VHSP-----EALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPR 369
+H EAL K E Q+ N M+E +P+ + +E++R P + L++ R
Sbjct: 280 MHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL-LMLMR 333
Query: 370 KASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIP 429
K DV++ ++VPKG + + D + P + PER D V+G I
Sbjct: 334 KVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER----DEKVEG---AFIG 386
Query: 430 FGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKL 462
FGAG C G + + +L + +S+D++L
Sbjct: 387 FGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 419
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 179/453 (39%), Gaps = 55/453 (12%)
Query: 30 KLPP-GPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVL 88
KLPP P PI+G++ Q G P + + + LK G T ++
Sbjct: 3 KLPPVYPVTVPILGHIIQFGKSPLGFMQECKR------QLKSGIFTINIVGKRVTIVGDP 56
Query: 89 QDHDAALCNRN---VPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQD 145
+H RN P V S +G + + + ++R+ N ++
Sbjct: 57 HEHSRFFLPRNEVLSPREVYSFMVPVFG-EGVAYAAPYPRMREQLNF---------LAEE 106
Query: 146 LRRKKIQQLVAFVQESCHAGEA---------IDIGQAAFDTAVNLLSNTIFSVDLADPNS 196
L K Q V +Q A I++ + +N +F DL
Sbjct: 107 LTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLR--KR 164
Query: 197 ASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQRL 256
AR F L+ M S P +L+ Q R +R ++ ++L I R
Sbjct: 165 LDARRFAQLL-AKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQ--KILSEIIIAR- 220
Query: 257 KQRQEHGFVGSKDMLDTLLN--ISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTEL 314
K+ + + + D+L LL+ + + ++ + + AG T+S T W++ L
Sbjct: 221 KEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL 280
Query: 315 VHSP-----EALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPR 369
+H EAL K E Q+ N M+E +P+ + +E++R P + L++ R
Sbjct: 281 MHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL-LMLMR 334
Query: 370 KASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIP 429
K DV++ ++VPKG + + D + P + PER D V+G I
Sbjct: 335 KVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER----DEKVEG---AFIG 387
Query: 430 FGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKL 462
FGAG C G + + +L + +S+D++L
Sbjct: 388 FGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 179/453 (39%), Gaps = 55/453 (12%)
Query: 30 KLPP-GPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVL 88
KLPP P PI+G++ Q G P + + + LK G T ++
Sbjct: 3 KLPPVYPVTVPILGHIIQFGKSPLGFMQECKR------QLKSGIFTINIVGKRVTIVGDP 56
Query: 89 QDHDAALCNRN---VPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQD 145
+H RN P V S +G + + + ++R+ N ++
Sbjct: 57 HEHSRFFLPRNEVLSPREVYSFMVPVFG-EGVAYAAPYPRMREQLNF---------LAEE 106
Query: 146 LRRKKIQQLVAFVQESCHAGEA---------IDIGQAAFDTAVNLLSNTIFSVDLADPNS 196
L K Q V +Q A I++ + +N +F DL
Sbjct: 107 LTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLR--KR 164
Query: 197 ASAREFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQRL 256
AR F L+ M S P +L+ Q R +R ++ ++L I R
Sbjct: 165 LDARRFAQLL-AKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQ--KILSEIIIAR- 220
Query: 257 KQRQEHGFVGSKDMLDTLLN--ISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTEL 314
K+ + + + D+L LL+ + + ++ + + AG T+S T W++ L
Sbjct: 221 KEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL 280
Query: 315 VHSP-----EALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPR 369
+H EAL K E Q+ N M+E +P+ + +E++R P + L++ R
Sbjct: 281 MHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL-LMLMR 334
Query: 370 KASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIP 429
K DV++ ++VPKG + + D + P + PER D V+G I
Sbjct: 335 KVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER----DEKVEG---AFIG 387
Query: 430 FGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKL 462
FGAG C G + + +L + +S+D++L
Sbjct: 388 FGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 176/450 (39%), Gaps = 54/450 (12%)
Query: 32 PPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDH 91
P P PI+G++ Q G P + + + LK G T ++ +H
Sbjct: 19 PVYPVTVPILGHIIQFGKSPLGFMQECKR------QLKSGIFTINIVGKRVTIVGDPHEH 72
Query: 92 DAALCNRN---VPDSVSSHQKGEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRR 148
RN P V S +G + + + ++R+ N ++L
Sbjct: 73 SRFFLPRNEVLSPREVYSFMVPVFG-EGVAYAAPYPRMREQLNF---------LAEELTI 122
Query: 149 KKIQQLVAFVQESCHAGEA---------IDIGQAAFDTAVNLLSNTIFSVDLADPNSASA 199
K Q V +Q A I++ + +N +F DL A
Sbjct: 123 AKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLR--KRLDA 180
Query: 200 REFKNLMWGLMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQRLKQR 259
R F L+ M S P +L+ Q R +R ++ ++L I R K+
Sbjct: 181 RRFAQLL-AKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQ--KILSEIIIAR-KEE 236
Query: 260 QEHGFVGSKDMLDTLLN--ISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHS 317
+ + + D+L LL+ + + ++ + + AG T+S T W++ L+H
Sbjct: 237 EVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHP 296
Query: 318 P-----EALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKAS 372
EAL K E Q+ N M+E +P+ + +E++R P + L++ RK
Sbjct: 297 ANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL-LMLMRKVM 350
Query: 373 VDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGA 432
DV++ ++VPKG + + D + P + PER D V+G I FGA
Sbjct: 351 ADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER----DEKVEG---AFIGFGA 403
Query: 433 GRRICPGLPLAIRMLHLMLGSLIKSFDWKL 462
G C G + + +L + +S+D++L
Sbjct: 404 GVHKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 298 AGAETTSSTLEWALTELVHSP-----EALSKARSELEKQIGKGNPMEESDIARLPYLQAV 352
AG T+S T W++ L+H EAL K E Q+ N M+E +P+ +
Sbjct: 277 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERC 331
Query: 353 VKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPER 412
+E++R P + L++ RK DV++ ++VPKG + + D + P + PER
Sbjct: 332 ARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER 390
Query: 413 FLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKL 462
D V+G I FGAG C G + + +L + +S+D++L
Sbjct: 391 ----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 87/209 (41%), Gaps = 5/209 (2%)
Query: 256 LKQRQEHGFVGSKDMLDTLLNISE--SEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTE 313
+K RQ+ +D L LL + ++ + + K L L AG ET +S L
Sbjct: 211 IKARQQQP-PSEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLL 269
Query: 314 LVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASV 373
L + + R E + ++ + + ++PYL V++E LRL P V R+
Sbjct: 270 LGQHSDIRERVRQE-QNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGF-RELIQ 327
Query: 374 DVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAG 433
D Q GF PKG V D + +P F PERF F +PFG G
Sbjct: 328 DCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGG 387
Query: 434 RRICPGLPLAIRMLHLMLGSLIKSFDWKL 462
R C G A + L LI+ FDW L
Sbjct: 388 LRECLGKEFARLEMKLFATRLIQQFDWTL 416
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 348 YLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYS 407
Y + V+E R +P P ++ R AS D + G P+G QV+++ + DA+TW +P
Sbjct: 265 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 408 FKPERFLGLDVDVKGRNFELIPFGAGRRI----CPG--LPLAIRML--HLMLGSL 454
F+PERF D D +F IP G G CPG + LAI + HL++ ++
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 348 YLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYS 407
Y + V+E R +P P ++ R AS D + G P+G QV+++ + DA+TW +P
Sbjct: 265 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 408 FKPERFLGLDVDVKGRNFELIPFGAGRRI----CPG--LPLAIRML--HLMLGSL 454
F+PERF D D +F IP G G CPG + LAI + HL++ ++
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 348 YLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYS 407
Y + V+E R +P P ++ R AS D + G P+G QV+++ + DA+TW +P
Sbjct: 265 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 408 FKPERFLGLDVDVKGRNFELIPFGAGRRI----CPG--LPLAIRML--HLMLGSL 454
F+PERF D D +F IP G G CPG + LAI + HL++ ++
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 348 YLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYS 407
Y + V+E R +P P ++ R AS D + G P+G QV+++ + DA+TW +P
Sbjct: 273 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 408 FKPERFLGLDVDVKGRNFELIPFGAGRRI----CPG--LPLAIRML--HLMLGSL 454
F+PERF D D +F IP G G CPG + LAI + HL++ ++
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 348 YLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYS 407
Y + V+E R +P P ++ R AS D + G P+G QV+++ + DA+TW +P
Sbjct: 273 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 408 FKPERFLGLDVDVKGRNFELIPFGAGRRI----CPG--LPLAIRML--HLMLGSL 454
F+PERF D D +F IP G G CPG + LAI + HL++ ++
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 8/179 (4%)
Query: 283 IDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESD 342
+ R + L++ A +T S +L + L + P E++ IG+ + ++ D
Sbjct: 291 LTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD-IKIDD 349
Query: 343 IARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTW 402
I +L ++ + E++R P V L++ RKA D I G+ V KG +++N + R +
Sbjct: 350 IQKLKVMENFIYESMRYQPVVDLVM-RKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFF 407
Query: 403 ENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWK 461
P F E F +V R F+ PFG G R C G +A+ M+ +L +L++ F K
Sbjct: 408 PKPNEFTLENFAK---NVPYRYFQ--PFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVK 461
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 272 DTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQ 331
DTL + EK HL + L+A+ A T +T W+L +++ +PEA+ A E+++
Sbjct: 248 DTLSTFDDLEKAK----THLVV-LWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRT 301
Query: 332 IG--------KGNP--MEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQI---- 377
+ +GNP + ++++ LP L +++KE+LRL A L R A D +
Sbjct: 302 LENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSAS--LNIRTAKEDFTLHLED 359
Query: 378 SGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGR--------NFELIP 429
+ + K + + + D + +P +FK +R+L + K + +P
Sbjct: 360 GSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMP 419
Query: 430 FGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKL 462
FG+G ICPG AI + L ++ F+ +L
Sbjct: 420 FGSGATICPGRLFAIHEIKQFLILMLSYFELEL 452
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 348 YLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYS 407
Y + V+E R +P P ++ R AS D + G P+G QV+++ + DA+TW +P
Sbjct: 273 YAELFVQEVRRFYPFGPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 408 FKPERFLGLDVDVKGRNFELIPFGAGRRI----CPG--LPLAIRML--HLMLGSL 454
F+PERF D D +F IP G G CPG + LAI + HL++ ++
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 272 DTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQ 331
DTL + EK HL + L+A+ A T +T W+L +++ +PEA+ A E+++
Sbjct: 248 DTLSTFDDLEKAK----THLVV-LWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRT 301
Query: 332 IG--------KGNP--MEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQI---- 377
+ +GNP + ++++ LP L +++KE+LRL A L R A D +
Sbjct: 302 LENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSAS--LNIRTAKEDFTLHLED 359
Query: 378 SGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGR--------NFELIP 429
+ + K + + + D + +P +FK +R+L + K + +P
Sbjct: 360 GSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMP 419
Query: 430 FGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKL 462
FG+G ICPG AI + L ++ F+ +L
Sbjct: 420 FGSGATICPGRLFAIHEIKQFLILMLSYFELEL 452
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 41/246 (16%)
Query: 224 MLRKLDIQGVRRRLSRHHIKILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESEKI 283
+++ +D R+ L+ +I ++ + F + +++R+ H +DM+ LL E +K+
Sbjct: 164 LIQTIDFTRSRKALTEGNIMAVQAMAYF-KELIQKRKRHP---QQDMISMLLKGREKDKL 219
Query: 284 DRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDI 343
+ + L AG ETT + + ++ L+ PE L K R E D+
Sbjct: 220 TEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLR-------------ENPDL 266
Query: 344 ARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWE 403
+ V+E LR + + + R AS D+ I G + +G QV + A RD S +
Sbjct: 267 -----IGTAVEECLR-YESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFT 320
Query: 404 NPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIK------- 456
NP F D+ + FG G +C G LA + + +L++
Sbjct: 321 NPDVF----------DITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNL 370
Query: 457 -SFDWK 461
F+W+
Sbjct: 371 ADFEWR 376
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 82/200 (41%), Gaps = 36/200 (18%)
Query: 262 HGFVGSK--DMLDTLLNISESEKIDRNDFKH-----LFLDLFAAGAETTSSTLEWALTEL 314
HG VG K + D LL+ + +++ D H + L L AG ETT + + L
Sbjct: 200 HGLVGRKQAEPEDGLLDELIARQLEEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTL 259
Query: 315 VHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVD 374
+ PE + L + G + VV+E LR +V I R A D
Sbjct: 260 IQHPEQIDV----LLRDPGA--------------VSGVVEELLRF-TSVSDHIVRMAKED 300
Query: 375 VQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGR 434
+++ G + G VLV+ + RDA +ENP F R R+ + FG G
Sbjct: 301 IEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARR--------NARHH--VGFGHGI 350
Query: 435 RICPGLPLAIRMLHLMLGSL 454
C G LA L + LG L
Sbjct: 351 HQCLGQNLARAELEIALGGL 370
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 35/204 (17%)
Query: 257 KQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLFLDLFAAGAETTSSTLEWALTEL 314
++R E G D+L L+++ + + ++ ++ + L L AG E + S + L
Sbjct: 201 RRRTEPG----DDLLSALISVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLL 256
Query: 315 VHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVD 374
+ P+ L+ R+ D + LP V+E LR + A P R A+ +
Sbjct: 257 LTHPDQLALVRA---------------DPSALP---NAVEEILR-YIAPPETTTRFAAEE 297
Query: 375 VQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGR 434
V+I G +P+ + VLV A RD S + +P+ F R D +G + FG G
Sbjct: 298 VEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFDVTR------DTRGH----LSFGQGI 347
Query: 435 RICPGLPLAIRMLHLMLGSLIKSF 458
C G PLA + L +L F
Sbjct: 348 HFCMGRPLAKLEGEVALRALFGRF 371
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 20/196 (10%)
Query: 309 WALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIP 368
W + L+ PEAL R E+ Q GK +EE P +V+ ETLRL A LI
Sbjct: 275 WVMGYLLTHPEALRAVREEI--QGGKHLRLEERQ-KNTPVFDSVLWETLRLTAAA--LIT 329
Query: 369 RKASVDVQIS-----GFIVPKGAQVLVNAW-AIGRDASTWENPYSFKPERFLGLDVDVKG 422
R + D +I + + +G ++ V + + D + P F+ +RFL D K
Sbjct: 330 RDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKK 389
Query: 423 RNFE--------LIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMDME 474
F+ +P+G +CPG A+ + ++ +++ FD +L K T +
Sbjct: 390 DFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDP 449
Query: 475 EKFGI-TLQKAQPLRV 489
++G LQ A L +
Sbjct: 450 SRYGFGILQPAGDLEI 465
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 35/204 (17%)
Query: 257 KQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLFLDLFAAGAETTSSTLEWALTEL 314
++R E G D+L L+ + + + ++ ++ + L L AG ET+ S + L
Sbjct: 202 RRRTEPG----DDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFETSVSLIGIGTYLL 257
Query: 315 VHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVD 374
+ P+ L+ R D + LP V+E LR + A P R A+ +
Sbjct: 258 LTHPDQLALVRR---------------DPSALP---NAVEEILR-YIAPPETTTRFAAEE 298
Query: 375 VQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGR 434
V+I G +P+ + VLV A RD + +P+ F R D +G + FG G
Sbjct: 299 VEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR------DTRGH----LSFGQGI 348
Query: 435 RICPGLPLAIRMLHLMLGSLIKSF 458
C G PLA + L +L F
Sbjct: 349 HFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 40/221 (18%)
Query: 243 KILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESE----KIDRNDFKHLFLDLFAA 298
++ EVLD+ I + R G DM L+ + E ++ + + L + +A
Sbjct: 190 RLYEVLDQLIAAK---RATPG----DDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISA 242
Query: 299 GAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLR 358
G ETT + ++ A+ L+ P+ L+ R KG + +D VV+ETLR
Sbjct: 243 GYETTVNVIDQAVHTLLTRPDQLALVR--------KGE-VTWAD---------VVEETLR 284
Query: 359 LHPAVPLLIPRKASVDVQI-SGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLD 417
PAV L R A D+ + G + +G +L + A R E+ +F R +
Sbjct: 285 HEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRTVK-- 342
Query: 418 VDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
E + FG G C G PLA + L L SL F
Sbjct: 343 --------EHLAFGHGVHFCLGAPLARMEVTLALESLFGRF 375
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 30/249 (12%)
Query: 267 SKDMLDTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARS 326
SK + LL++ E + + L L L+A + W L L+ +PEAL+ R
Sbjct: 231 SKWLESYLLHLEEMGVSEEMQARALVLQLWATQGNMGPAAF-WLLLFLLKNPEALAAVRG 289
Query: 327 EL-------EKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQI-- 377
EL E+ + + + + + P L +V+ E+LRL A P I R+ VD+ +
Sbjct: 290 ELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-TAAP-FITREVVVDLAMPM 347
Query: 378 ---SGFIVPKGAQVLVNAW-AIGRDASTWENPYSFKPERFLGLDVDVKG---------RN 424
F + +G ++L+ + + RD + +P FK RFL D K +N
Sbjct: 348 ADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKN 407
Query: 425 FELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKL-ESKVTTENMDMEEKFGITLQK 483
+ + P+GAG C G A+ + + ++ D +L + V D+ ++G L
Sbjct: 408 YNM-PWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDL-SRYGFGLM- 464
Query: 484 AQPLRVVPV 492
QP VPV
Sbjct: 465 -QPEHDVPV 472
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 30/249 (12%)
Query: 267 SKDMLDTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARS 326
SK + LL++ E + + L L L+A + W L L+ +PEAL+ R
Sbjct: 243 SKWLESYLLHLEEMGVSEEMQARALVLQLWATQGNMGPAAF-WLLLFLLKNPEALAAVRG 301
Query: 327 EL-------EKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQI-- 377
EL E+ + + + + + P L +V+ E+LRL A P I R+ VD+ +
Sbjct: 302 ELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-TAAP-FITREVVVDLAMPM 359
Query: 378 ---SGFIVPKGAQVLVNAW-AIGRDASTWENPYSFKPERFLGLDVDVKG---------RN 424
F + +G ++L+ + + RD + +P FK RFL D K +N
Sbjct: 360 ADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKN 419
Query: 425 FELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKL-ESKVTTENMDMEEKFGITLQK 483
+ + P+GAG C G A+ + + ++ D +L + V D+ ++G L
Sbjct: 420 YNM-PWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDL-SRYGFGLM- 476
Query: 484 AQPLRVVPV 492
QP VPV
Sbjct: 477 -QPEHDVPV 484
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 79/201 (39%), Gaps = 27/201 (13%)
Query: 246 EVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLFLDLFAAGAETT 303
E L +++ +K+R+ V L ++L SE E + D L L++ A E
Sbjct: 219 EQLSQYLMPVIKERR----VNPGSDLISILCTSEYEGMALSDKDILALILNVLLAATEPA 274
Query: 304 SSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAV 363
TL + L+++PE ++ +A + + ETLR P V
Sbjct: 275 DKTLALMIYHLLNNPEQMNDV------------------LADRSLVPRAIAETLRYKPPV 316
Query: 364 PLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERF-LGLDVDVKG 422
L IPR+ S D + G + K V A RD +E P F R LG+ G
Sbjct: 317 QL-IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSG 375
Query: 423 RNFELIPFGAGRRICPGLPLA 443
L FG+G C G A
Sbjct: 376 AARHL-AFGSGIHNCVGTAFA 395
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 35/204 (17%)
Query: 257 KQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLFLDLFAAGAETTSSTLEWALTEL 314
++R E G D+L L+ + + + ++ ++ + L L AG E++ S + L
Sbjct: 202 RRRTEPG----DDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLL 257
Query: 315 VHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVD 374
+ P+ L+ R D + LP V+E LR + A P R A+ +
Sbjct: 258 LTHPDQLALVRR---------------DPSALP---NAVEEILR-YIAPPETTTRFAAEE 298
Query: 375 VQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGR 434
V+I G +P+ + VLV A RD + +P+ F R D +G + FG G
Sbjct: 299 VEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR------DTRGH----LSFGQGI 348
Query: 435 RICPGLPLAIRMLHLMLGSLIKSF 458
C G PLA + L +L F
Sbjct: 349 HFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 35/204 (17%)
Query: 257 KQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLFLDLFAAGAETTSSTLEWALTEL 314
++R E G D+L L+ + + + ++ ++ + L L AG E++ S + L
Sbjct: 201 RRRTEPG----DDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLL 256
Query: 315 VHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVD 374
+ P+ L+ R D + LP V+E LR + A P R A+ +
Sbjct: 257 LTHPDQLALVRR---------------DPSALP---NAVEEILR-YIAPPETTTRFAAEE 297
Query: 375 VQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGR 434
V+I G +P+ + VLV A RD + +P+ F R D +G + FG G
Sbjct: 298 VEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR------DTRGH----LSFGQGI 347
Query: 435 RICPGLPLAIRMLHLMLGSLIKSF 458
C G PLA + L +L F
Sbjct: 348 HFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 35/204 (17%)
Query: 257 KQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLFLDLFAAGAETTSSTLEWALTEL 314
++R E G D+L L+ + + + ++ ++ + L L AG E + S + L
Sbjct: 202 RRRTEPG----DDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLL 257
Query: 315 VHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVD 374
+ P+ L+ R D + LP V+E LR + A P R A+ +
Sbjct: 258 LTHPDQLALVRR---------------DPSALP---NAVEEILR-YIAPPETTTRFAAEE 298
Query: 375 VQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGR 434
V+I G +P+ + VLV A RD + +P+ F R D +G + FG G
Sbjct: 299 VEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR------DTRGH----LSFGQGI 348
Query: 435 RICPGLPLAIRMLHLMLGSLIKSF 458
C G PLA + L +L F
Sbjct: 349 HFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 35/204 (17%)
Query: 257 KQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLFLDLFAAGAETTSSTLEWALTEL 314
++R E G D+L L+ + + + ++ ++ + L L AG E + S + L
Sbjct: 201 RRRTEPG----DDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLL 256
Query: 315 VHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVD 374
+ P+ L+ R D + LP V+E LR + A P R A+ +
Sbjct: 257 LTHPDQLALVRR---------------DPSALP---NAVEEILR-YIAPPETTTRFAAEE 297
Query: 375 VQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGR 434
V+I G +P+ + VLV A RD + +P+ F R D +G + FG G
Sbjct: 298 VEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR------DTRGH----LSFGQGI 347
Query: 435 RICPGLPLAIRMLHLMLGSLIKSF 458
C G PLA + L +L F
Sbjct: 348 HFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 31/192 (16%)
Query: 269 DMLDTLLNI-SESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSE 327
D+L LL ++ ++ + L + AAG +TT + +A+ L+ SPEAL ++E
Sbjct: 224 DVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE 283
Query: 328 LEKQIGKGNPMEESDIARLPYL-QAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGA 386
P L + + E LR + + R A D++ G + KG
Sbjct: 284 -------------------PGLMRNALDEVLRFENILRIGTVRFARQDLEYCGASIKKGE 324
Query: 387 QVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRM 446
V + + RD + + P F DV+ + +G G +CPG+ LA
Sbjct: 325 MVFLLIPSALRDGTVFSRPDVF----------DVRRDTSASLAYGRGPHVCPGVSLARLE 374
Query: 447 LHLMLGSLIKSF 458
+ +G++ + F
Sbjct: 375 AEIAVGTIFRRF 386
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 27/169 (15%)
Query: 288 FKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLP 347
F + + F AG +T S L AL L+ P+ + + E
Sbjct: 223 FATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE------------------ 264
Query: 348 YLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYS 407
+ A V+E LR++ A +PR A+ D+Q+ +V KG VLV D + NP S
Sbjct: 265 LIPAGVEELLRINLAFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGS 324
Query: 408 FKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIK 456
+ +R + FG G+ CPG L R + + +L+K
Sbjct: 325 IELDR---------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK 364
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 31/192 (16%)
Query: 269 DMLDTLLNI-SESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSE 327
D+L LL ++ ++ + L + AAG +TT + +A+ L+ SPEAL ++E
Sbjct: 224 DVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE 283
Query: 328 LEKQIGKGNPMEESDIARLPYL-QAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGA 386
P L + + E LR + + R A D++ G + KG
Sbjct: 284 -------------------PGLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGE 324
Query: 387 QVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRM 446
V + + RD + + P F DV+ + +G G +CPG+ LA
Sbjct: 325 MVFLLIPSALRDGTVFSRPDVF----------DVRRDTSASLAYGRGPHVCPGVSLARLE 374
Query: 447 LHLMLGSLIKSF 458
+ +G++ + F
Sbjct: 375 AEIAVGTIFRRF 386
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 16/119 (13%)
Query: 342 DIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAI--GRDA 399
D R+P A+V+E LR P P + R + +++G +P A V+VN W + RD+
Sbjct: 270 DPGRIP---AIVEEVLRYRPPFPQM-QRTTTKATEVAGVPIP--ADVMVNTWVLSANRDS 323
Query: 400 STWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
++P F P R K + FG G C G PLA + L +I F
Sbjct: 324 DAHDDPDRFDPSR--------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 16/119 (13%)
Query: 342 DIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAI--GRDA 399
D R+P A+V+E LR P P + R + +++G +P A V+VN W + RD+
Sbjct: 290 DPGRIP---AIVEEVLRYRPPFPQM-QRTTTKATEVAGVPIP--ADVMVNTWVLSANRDS 343
Query: 400 STWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
++P F P R K + FG G C G PLA + L +I F
Sbjct: 344 DAHDDPDRFDPSR--------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 27/169 (15%)
Query: 288 FKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLP 347
F + + F AG +T S L AL L+ P+ + + E
Sbjct: 222 FATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE------------------ 263
Query: 348 YLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYS 407
+ A V+E LR++ + +PR A+ D+Q+ +V KG VLV D + NP S
Sbjct: 264 LIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGS 323
Query: 408 FKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIK 456
+ +R + FG G+ CPG L R + + +L+K
Sbjct: 324 IELDR---------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK 363
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 27/169 (15%)
Query: 288 FKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLP 347
F + + F AG +T S L AL L+ P+ + + E
Sbjct: 223 FATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE------------------ 264
Query: 348 YLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYS 407
+ A V+E LR++ + +PR A+ D+Q+ +V KG VLV D + NP S
Sbjct: 265 LIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGS 324
Query: 408 FKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIK 456
+ +R + FG G+ CPG L R + + +L+K
Sbjct: 325 IELDR---------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK 364
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 34/208 (16%)
Query: 248 LDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTL 307
LD I Q + G VG+ + D L N +IDR + + L AG ETT+S
Sbjct: 200 LDGLITQ-FQTEPGAGLVGAL-VADQLAN----GEIDREELISTAMLLLIAGHETTASMT 253
Query: 308 EWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLI 367
++ L+ PE + R+ D + +P V+E LR +
Sbjct: 254 SLSVITLLDHPEQYAALRA---------------DRSLVP---GAVEELLRYLAIADIAG 295
Query: 368 PRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFEL 427
R A+ D+++ G ++ G V+V RD + +E+P + LD+ R+
Sbjct: 296 GRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDA--------LDIHRSARHH-- 345
Query: 428 IPFGAGRRICPGLPLAIRMLHLMLGSLI 455
+ FG G C G LA L ++L +L+
Sbjct: 346 LAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 9/117 (7%)
Query: 350 QAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFK 409
+ V+E R +P P L D + KG VL++ + D W++P F+
Sbjct: 277 EMFVQEVRRYYPFGPFL-GALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFR 335
Query: 410 PERFLGLDVDVKGRNFELIPFGAGR----RICPGLPLAIRMLHLMLGSLIKSFDWKL 462
PERF + ++ F++IP G G CPG + I ++ L L+ ++ +
Sbjct: 336 PERFAEREENL----FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDV 388
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 34/208 (16%)
Query: 248 LDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTL 307
LD I Q + G VG+ + D L N +IDR + + L AG ETT+S
Sbjct: 200 LDGLITQ-FQTEPGAGLVGAL-VADQLAN----GEIDREELISTAMLLLIAGHETTASMT 253
Query: 308 EWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLI 367
++ L+ PE + R+ D + +P V+E LR +
Sbjct: 254 SLSVITLLDHPEQYAALRA---------------DRSLVP---GAVEELLRYLAIADIAG 295
Query: 368 PRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFEL 427
R A+ D+++ G ++ G V+V RD + +E+P + LD+ R+
Sbjct: 296 GRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDA--------LDIHRSARHH-- 345
Query: 428 IPFGAGRRICPGLPLAIRMLHLMLGSLI 455
+ FG G C G LA L ++L +L+
Sbjct: 346 LAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 34/208 (16%)
Query: 248 LDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTL 307
LD I Q + G VG+ + D L N +IDR + + L AG ETT+S
Sbjct: 200 LDGLITQ-FQTEPGAGLVGAL-VADQLAN----GEIDREELISTAMLLLIAGHETTASMT 253
Query: 308 EWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLI 367
++ L+ PE + R+ D + +P V+E LR +
Sbjct: 254 SLSVITLLDHPEQYAALRA---------------DRSLVP---GAVEELLRYLAIADIAG 295
Query: 368 PRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFEL 427
R A+ D+++ G ++ G V+V RD + +E+P + LD+ R+
Sbjct: 296 GRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDA--------LDIHRSARHH-- 345
Query: 428 IPFGAGRRICPGLPLAIRMLHLMLGSLI 455
+ FG G C G LA L ++L +L+
Sbjct: 346 LAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 27/169 (15%)
Query: 288 FKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLP 347
F + + F AG +T S L AL L+ P+ + + E
Sbjct: 223 FATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE------------------ 264
Query: 348 YLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYS 407
+ A V+E LR++ + +PR A+ D+Q+ +V KG VLV D + NP S
Sbjct: 265 LIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGS 324
Query: 408 FKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIK 456
+ +R + FG G+ CPG L R + + +L+K
Sbjct: 325 IELDR---------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK 364
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 34/208 (16%)
Query: 248 LDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTL 307
LD I Q + G VG+ + D L N +IDR + + L AG ETT+S
Sbjct: 200 LDGLITQ-FQTEPGAGLVGAL-VADQLAN----GEIDREELISTAMLLLIAGHETTASMT 253
Query: 308 EWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLI 367
++ L+ PE + R+ D + +P V+E LR +
Sbjct: 254 SLSVITLLDHPEQYAALRA---------------DRSLVP---GAVEELLRYLAIADIAG 295
Query: 368 PRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFEL 427
R A+ D+++ G ++ G V+V RD + +E+P + LD+ R+
Sbjct: 296 GRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDA--------LDIHRSARHH-- 345
Query: 428 IPFGAGRRICPGLPLAIRMLHLMLGSLI 455
+ FG G C G LA L ++L +L+
Sbjct: 346 LAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 33/170 (19%)
Query: 289 KHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPY 348
K++ L L G ETT++ + + + +P+ + A L
Sbjct: 180 KYIML-LIIGGNETTTNLIGNMIRVIDENPDIIDDA---------------------LKN 217
Query: 349 LQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSF 408
V+ETLR + + L R A+ D I+ + KG QV+V + RD + ++ P F
Sbjct: 218 RSGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLF 277
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
K GR + FG G +C G PLA + L ++ F
Sbjct: 278 KI-----------GRREMHLAFGIGIHMCLGAPLARLEASIALNDILNHF 316
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKP 410
AV++ET+R P V L+ R A D+ I VPKG +L+ A RD + P F P
Sbjct: 291 AVIEETMRYDPPV-QLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDP 349
Query: 411 ERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTEN 470
+R + FG G C G PLA + L +L F E++++ E
Sbjct: 350 DR----------AQIRHLGFGKGAHFCLGAPLARLEATVALPALAARFP---EARLSGEP 396
Query: 471 MDMEEKFGITLQKAQPLRVV 490
E K +TL+ L +
Sbjct: 397 ---EYKRNLTLRGMSTLSIA 413
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 27/169 (15%)
Query: 288 FKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLP 347
F + + F AG T S L AL L+ P+ + + E
Sbjct: 223 FATIGVTFFGAGVIATGSFLTTALISLIQRPQLRNLLHEKPE------------------ 264
Query: 348 YLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYS 407
+ A V+E LR++ + +PR A+ D+Q+ +V KG VLV D + NP S
Sbjct: 265 LIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGS 324
Query: 408 FKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIK 456
+ +R + FG G+ CPG L R + + +L+K
Sbjct: 325 IELDR---------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK 364
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 27/169 (15%)
Query: 288 FKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLP 347
F + + F G +T S L AL L+ P+ + + E
Sbjct: 223 FATIGVTFFGGGVISTGSFLTTALISLIQRPQLRNLLHEKPE------------------ 264
Query: 348 YLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYS 407
+ A V+E LR++ + +PR A+ D+Q+ +V KG VLV D + NP S
Sbjct: 265 LIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGS 324
Query: 408 FKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIK 456
+ +R + FG G+ CPG L R + + +L+K
Sbjct: 325 IELDR---------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK 364
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 350 QAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFK 409
AVV+ETLR ++ R A+ DV + ++P G ++V+ A+GRD E +
Sbjct: 276 SAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRD----ERAHGPT 331
Query: 410 PERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
+RF D+ N I FG G +CPG L+ + L +L F
Sbjct: 332 ADRF---DLTRTSGNRH-ISFGHGPHVCPGAALSRMEAGVALPALYARF 376
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 42/193 (21%)
Query: 272 DTLLNISESEKIDRN--DFKHL---FLDLFAAGAETTSSTLEWALTELVHSPEALSKARS 326
D ++++ + K+D N D K++ ++ + AG +TTSS+ A+ L +PE L+ A+
Sbjct: 236 DDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAK- 294
Query: 327 ELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGA 386
SD A +P L V E +R V + R A D ++ G + +G
Sbjct: 295 --------------SDPALIPRL---VDEAVRWTAPVKSFM-RTALADTEVRGQNIKRGD 336
Query: 387 QVLVNAWAIGRDASTWENPYSFK----PERFLGLDVDVKGRNFELIPFGAGRRICPGLPL 442
+++++ + RD + NP F P R LG FG G +C G L
Sbjct: 337 RIMLSYPSANRDEEVFSNPDEFDITRFPNRHLG--------------FGWGAHMCLGQHL 382
Query: 443 AIRMLHLMLGSLI 455
A + + L+
Sbjct: 383 AKLEMKIFFEELL 395
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 24/164 (14%)
Query: 295 LFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVK 354
L AG ET +S L W+ L H P+ + E A +
Sbjct: 218 LLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA------------------LAAFQ 259
Query: 355 ETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFL 414
E LRL+P +L R+ + + +P+G ++++ + R + +F+PERFL
Sbjct: 260 EALRLYPPAWILT-RRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPERFL 316
Query: 415 GLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
GR F PFG G+R+C G A+ ++L + + F
Sbjct: 317 AERGTPSGRYF---PFGLGQRLCLGRDFALLEGPIVLRAFFRRF 357
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 85/228 (37%), Gaps = 40/228 (17%)
Query: 235 RRLSRHHIKILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLF 292
R S + ++L+ L + QRL V KD + + L + + ID++D +
Sbjct: 181 REASAANQELLDYLAILVEQRL--------VEPKDDIISKLCTEQVKPGNIDKSDAVQIA 232
Query: 293 LDLFAAGAETTSSTLEWALTELVHSPEALS--KARSELEKQIGKGNPMEESDIARLPYLQ 350
L AG T + + + L P+ L+ KA L Q
Sbjct: 233 FLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQF------------------ 274
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKP 410
V+E R H AV L I R A DV I +V ++ + + RD +ENP F
Sbjct: 275 --VEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNM 332
Query: 411 ERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
R K + + FG G C LA L + +L + F
Sbjct: 333 NR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 85/228 (37%), Gaps = 40/228 (17%)
Query: 235 RRLSRHHIKILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLF 292
R S + ++L+ L + QRL V KD + + L + + ID++D +
Sbjct: 182 REASAANQELLDYLAILVEQRL--------VEPKDDIISKLCTEQVKPGNIDKSDAVQIA 233
Query: 293 LDLFAAGAETTSSTLEWALTELVHSPEALS--KARSELEKQIGKGNPMEESDIARLPYLQ 350
L AG T + + + L P+ L+ KA L Q
Sbjct: 234 FLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQF------------------ 275
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKP 410
V+E R H AV L I R A DV I +V ++ + + RD +ENP F
Sbjct: 276 --VEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNM 333
Query: 411 ERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
R K + + FG G C LA L + +L + F
Sbjct: 334 NR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 27/169 (15%)
Query: 288 FKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLP 347
F + + F AG +T S L AL L+ P+ + + E
Sbjct: 223 FATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE------------------ 264
Query: 348 YLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYS 407
+ A V+E LR++ + +PR A+ D+Q+ +V KG VLV D + NP S
Sbjct: 265 LIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGS 324
Query: 408 FKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIK 456
+ +R + G G+ CPG L R + + +L+K
Sbjct: 325 IELDR---------PNPTSHLAHGRGQHFCPGSALGRRHAQIGIEALLK 364
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 28/174 (16%)
Query: 283 IDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESD 342
+D L L AG ETT++ + + L+ PE L+ + K NP
Sbjct: 230 LDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLT---------VVKANP----- 275
Query: 343 IARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTW 402
R P V+E LR + R A+ DV+I G + G V+V+ + D + +
Sbjct: 276 -GRTPM---AVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVF 331
Query: 403 ENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIK 456
++P LDV+ R+ + FG G C G LA L ++ +L +
Sbjct: 332 KDPAV--------LDVERGARHH--LAFGFGPHQCLGQNLARMELQIVFDTLFR 375
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 24/164 (14%)
Query: 295 LFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVK 354
L AG ET +S L W+ L H P+ + E A +
Sbjct: 218 LLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA------------------LAAFQ 259
Query: 355 ETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFL 414
E LRL+P +L R+ + + +P G ++++ + R + + +F+PERFL
Sbjct: 260 EALRLYPPAWILT-RRLERPLLLGEDRLPPGTTLVLSPYVTQR--LHFPDGEAFRPERFL 316
Query: 415 GLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
GR F PFG G+R+C G A+ ++L + + F
Sbjct: 317 EERGTPSGRYF---PFGLGQRLCLGRDFALLEGPIVLRAFFRRF 357
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 27/169 (15%)
Query: 288 FKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLP 347
F + + F AG +T S L AL L+ P+ + + E
Sbjct: 223 FATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE------------------ 264
Query: 348 YLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYS 407
+ A V+E LR++ + +PR A+ D+Q+ +V KG VLV D + NP S
Sbjct: 265 LIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGS 324
Query: 408 FKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIK 456
+ +R + FG G+ C G L R + + +L+K
Sbjct: 325 IELDR---------PNPTSHLAFGRGQHFCLGSALGRRHAQIGIEALLK 364
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 87/221 (39%), Gaps = 39/221 (17%)
Query: 226 RKLDIQGVRRRLSRHHIKILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESEKIDR 285
R LD + R H I E D ++R+E G +D+L +L+ + + R
Sbjct: 165 RTLDRGASAEDMRRGHAAIAEFADYVERALARRRRE----GGEDLLALMLDAHDRGLMSR 220
Query: 286 NDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIAR 345
N+ + G ET +S + A+ L+ P+ L R R
Sbjct: 221 NEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRR------------------R 262
Query: 346 LPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENP 405
L V+E LR P+V R+ VDV++ G + + V+V A A RD ++ P
Sbjct: 263 PDLLAQAVEECLRYDPSVQSNT-RQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRP 321
Query: 406 YSFKPERFLGLDVDVKGRNFELIP---FGAGRRICPGLPLA 443
F ER + +P FGAG R C G LA
Sbjct: 322 DDFDIER-------------DPVPSMSFGAGMRYCLGSYLA 349
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 84/228 (36%), Gaps = 40/228 (17%)
Query: 235 RRLSRHHIKILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLF 292
R S + ++L+ L + QRL V KD + + L + + ID++D +
Sbjct: 181 REASAANQELLDYLAILVEQRL--------VEPKDDIISKLCTEQVKPGNIDKSDAVQIA 232
Query: 293 LDLFAAGAETTSSTLEWALTELVHSPEALS--KARSELEKQIGKGNPMEESDIARLPYLQ 350
L AG T + + + L P+ L+ KA L Q
Sbjct: 233 FLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQF------------------ 274
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKP 410
V+E R H A L I R A DV I +V ++ + + RD +ENP F
Sbjct: 275 --VEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNM 332
Query: 411 ERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
R K + + FG G C LA L + +L + F
Sbjct: 333 NR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 84/228 (36%), Gaps = 40/228 (17%)
Query: 235 RRLSRHHIKILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLF 292
R S + ++L+ L + QRL V KD + + L + + ID++D +
Sbjct: 182 REASAANQELLDYLAILVEQRL--------VEPKDDIISKLCTEQVKPGNIDKSDAVQIA 233
Query: 293 LDLFAAGAETTSSTLEWALTELVHSPEALS--KARSELEKQIGKGNPMEESDIARLPYLQ 350
L AG T + + + L P+ L+ KA L Q
Sbjct: 234 FLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQF------------------ 275
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKP 410
V+E R H A L I R A DV I +V ++ + + RD +ENP F
Sbjct: 276 --VEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNM 333
Query: 411 ERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
R K + + FG G C LA L + +L + F
Sbjct: 334 NR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 85/228 (37%), Gaps = 40/228 (17%)
Query: 235 RRLSRHHIKILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLF 292
R+ S + ++L+ L + QRL V KD + + L + + ID++D +
Sbjct: 182 RQASAANQELLDYLAILVEQRL--------VEPKDDIISKLCTEQVKPGNIDKSDAVQIA 233
Query: 293 LDLFAAGAETTSSTLEWALTELVHSPEALS--KARSELEKQIGKGNPMEESDIARLPYLQ 350
L AG T + + + L P+ L+ KA L Q
Sbjct: 234 FLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQF------------------ 275
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKP 410
V+E R H A L I R A DV I +V ++ + + RD +ENP F
Sbjct: 276 --VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNM 333
Query: 411 ERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
R K + + FG G C LA L + +L + F
Sbjct: 334 NR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 84/228 (36%), Gaps = 40/228 (17%)
Query: 235 RRLSRHHIKILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLF 292
R S + ++L+ L + QRL V KD + + L + + ID++D +
Sbjct: 181 REASAANQELLDYLAILVEQRL--------VEPKDDIISKLCTEQVKPGNIDKSDAVQIA 232
Query: 293 LDLFAAGAETTSSTLEWALTELVHSPEALS--KARSELEKQIGKGNPMEESDIARLPYLQ 350
L AG T + + + L P+ L+ KA L Q
Sbjct: 233 FLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQF------------------ 274
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKP 410
V+E R H A L I R A DV I +V ++ + + RD +ENP F
Sbjct: 275 --VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNM 332
Query: 411 ERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
R K + + FG G C LA L + +L + F
Sbjct: 333 NR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 84/228 (36%), Gaps = 40/228 (17%)
Query: 235 RRLSRHHIKILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLF 292
R S + ++L+ L + QRL V KD + + L + + ID++D +
Sbjct: 181 REASAANQELLDYLAILVEQRL--------VEPKDDIISKLCTEQVKPGNIDKSDAVQIA 232
Query: 293 LDLFAAGAETTSSTLEWALTELVHSPEALS--KARSELEKQIGKGNPMEESDIARLPYLQ 350
L AG T + + + L P+ L+ KA L Q
Sbjct: 233 FLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQF------------------ 274
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKP 410
V+E R H A L I R A DV I +V ++ + + RD +ENP F
Sbjct: 275 --VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNM 332
Query: 411 ERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
R K + + FG G C LA L + +L + F
Sbjct: 333 NR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 84/228 (36%), Gaps = 40/228 (17%)
Query: 235 RRLSRHHIKILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLF 292
R S + ++L+ L + QRL V KD + + L + + ID++D +
Sbjct: 182 REASAANQELLDYLAILVEQRL--------VEPKDDIISKLCTEQVKPGNIDKSDAVQIA 233
Query: 293 LDLFAAGAETTSSTLEWALTELVHSPEALS--KARSELEKQIGKGNPMEESDIARLPYLQ 350
L AG T + + + L P+ L+ KA L Q
Sbjct: 234 FLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQF------------------ 275
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKP 410
V+E R H A L I R A DV I +V ++ + + RD +ENP F
Sbjct: 276 --VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNM 333
Query: 411 ERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
R K + + FG G C LA L + +L + F
Sbjct: 334 NR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 84/228 (36%), Gaps = 40/228 (17%)
Query: 235 RRLSRHHIKILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLF 292
R S + ++L+ L + QRL V KD + + L + + ID++D +
Sbjct: 183 REASAANQELLDYLAILVEQRL--------VEPKDDIISKLCTEQVKPGNIDKSDAVQIA 234
Query: 293 LDLFAAGAETTSSTLEWALTELVHSPEALS--KARSELEKQIGKGNPMEESDIARLPYLQ 350
L AG T + + + L P+ L+ KA L Q
Sbjct: 235 FLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQF------------------ 276
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKP 410
V+E R H A L I R A DV I +V ++ + + RD +ENP F
Sbjct: 277 --VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNM 334
Query: 411 ERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
R K + + FG G C LA L + +L + F
Sbjct: 335 NR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 374
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 86/212 (40%), Gaps = 41/212 (19%)
Query: 241 HIKILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESEKIDRNDFKHLFLDLFAAGA 300
H +IL D I R R+E G D++ TL+ + + +D ++ G
Sbjct: 207 HTEILVYFDELITAR---RKEPG----DDLVSTLVT---DDDLTIDDVLLNCDNVLIGGN 256
Query: 301 ETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLR-L 359
ETT + A+ L P L+ R G + + VV+E LR
Sbjct: 257 ETTRHAITGAVHALATVPGLLTALRD------GSAD------------VDTVVEEVLRWT 298
Query: 360 HPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVD 419
PA+ +L R + DV I+G +P G V+ A RD + +++P +F P R
Sbjct: 299 SPAMHVL--RVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR------- 349
Query: 420 VKGRNFELIPFGAGRRICPGLPLAIRMLHLML 451
+ I FG G C G LA L ++L
Sbjct: 350 ---KPNRHITFGHGMHHCLGSALARIELSVVL 378
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 330 KQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKAS---VDVQISGFIVPKGA 386
K G GN E+ I ++P ++VV E+LR+ P VP + S ++ + F V KG
Sbjct: 312 KSYGDGNVTLEA-IEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGE 370
Query: 387 QVLVNAWAIGRDASTWENPYSFKPERFLG 415
+ +D ++ P + P+RF+G
Sbjct: 371 MLFGYQPFATKDPKVFDRPEEYVPDRFVG 399
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 264 FVGSKDMLDTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSK 323
V ++D D+L SE E +D L + L AG E+T++ + + V+ L
Sbjct: 229 LVQARDQQDSL---SEQELLD------LAIGLLVAGYESTTTQI----ADFVY----LLM 271
Query: 324 ARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHP-AVPLLIPRKASVDVQISGFIV 382
R EL +Q+ + R + + V+E R P V +PR A DV + G +
Sbjct: 272 TRPELRRQL----------LDRPELIPSAVEELTRWVPLGVGTAVPRYAVEDVTLRGVTI 321
Query: 383 PKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPL 442
G VL + A RD + + + +DV + + FG G C G PL
Sbjct: 322 RAGEPVLASTGAANRDQAQFPDADR----------IDVDRTPNQHLGFGHGVHHCLGAPL 371
Query: 443 AIRMLHLMLGSLIKSF 458
A L + L L++
Sbjct: 372 ARVELQVALEVLLQRL 387
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 83/228 (36%), Gaps = 40/228 (17%)
Query: 235 RRLSRHHIKILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLF 292
R S + ++L+ L + QRL V KD + + L + + ID++D +
Sbjct: 181 REASAANQELLDYLAILVEQRL--------VEPKDDIISKLCTEQVKPGNIDKSDAVQIA 232
Query: 293 LDLFAAGAETTSSTLEWALTELVHSPEALS--KARSELEKQIGKGNPMEESDIARLPYLQ 350
L AG + + + L P+ L+ KA L Q
Sbjct: 233 FLLLVAGNANMVNMIALGVATLAQHPDQLAQLKANPSLAPQF------------------ 274
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKP 410
V+E R H A L I R A DV I +V ++ + + RD +ENP F
Sbjct: 275 --VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNM 332
Query: 411 ERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
R K + + FG G C LA L + +L + F
Sbjct: 333 NR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 68/179 (37%), Gaps = 30/179 (16%)
Query: 267 SKDMLDTLLNISESE--KIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKA 324
+D+L L+ S+ + ++ + + L AG ETT + + + L+ P+ L+
Sbjct: 230 GEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAAL 289
Query: 325 RSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPK 384
R+++ L V+E LR V R V + G ++P
Sbjct: 290 RADMT------------------LLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPA 331
Query: 385 GAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLA 443
G VLV R + +P+ F D++ + FG G C G PLA
Sbjct: 332 GDTVLVVLADAHRTPERFPDPHRF----------DIRRDTAGHLAFGHGIHFCIGAPLA 380
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 68/179 (37%), Gaps = 30/179 (16%)
Query: 267 SKDMLDTLLNISESE--KIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKA 324
+D+L L+ S+ + ++ + + L AG ETT + + + L+ P+ L+
Sbjct: 230 GEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAAL 289
Query: 325 RSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPK 384
R+++ L V+E LR V R V + G ++P
Sbjct: 290 RADMT------------------LLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPA 331
Query: 385 GAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLA 443
G VLV R + +P+ F D++ + FG G C G PLA
Sbjct: 332 GDTVLVVLADAHRTPERFPDPHRF----------DIRRDTAGHLAFGHGIHFCIGAPLA 380
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 68/179 (37%), Gaps = 30/179 (16%)
Query: 267 SKDMLDTLLNISESE--KIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKA 324
+D+L L+ S+ + ++ + + L AG ETT + + + L+ P+ L+
Sbjct: 230 GEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAAL 289
Query: 325 RSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPK 384
R+++ L V+E LR V R V + G ++P
Sbjct: 290 RADMT------------------LLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPA 331
Query: 385 GAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLA 443
G VLV R + +P+ F D++ + FG G C G PLA
Sbjct: 332 GDTVLVVLADAHRTPERFPDPHRF----------DIRRDTAGHLAFGHGIHFCIGAPLA 380
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 83/228 (36%), Gaps = 40/228 (17%)
Query: 235 RRLSRHHIKILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLF 292
R S + ++L+ L + QRL V KD + + L + + ID++D +
Sbjct: 181 REASAANQELLDYLAILVEQRL--------VEPKDDIISKLCTEQVKPGNIDKSDAVQIA 232
Query: 293 LDLFAAGAETTSSTLEWALTELVHSPEALS--KARSELEKQIGKGNPMEESDIARLPYLQ 350
L AG + + + L P+ L+ KA L Q
Sbjct: 233 FLLLVAGNAVMVNMIALGVATLAQHPDQLAQLKANPSLAPQF------------------ 274
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKP 410
V+E R H A L I R A DV I +V ++ + + RD +ENP F
Sbjct: 275 --VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNM 332
Query: 411 ERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
R K + + FG G C LA L + +L + F
Sbjct: 333 NR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 83/228 (36%), Gaps = 40/228 (17%)
Query: 235 RRLSRHHIKILEVLDRFIYQRLKQRQEHGFVGSKDMLDTLLNISESE--KIDRNDFKHLF 292
R S + ++L+ L + QRL V KD + + L + + ID++D +
Sbjct: 181 REASAANQELLDYLAILVEQRL--------VEPKDDIISKLCTEQVKPGNIDKSDAVQIA 232
Query: 293 LDLFAAGAETTSSTLEWALTELVHSPEALS--KARSELEKQIGKGNPMEESDIARLPYLQ 350
L AG + + + L P+ L+ KA L Q
Sbjct: 233 FLLLVAGNAAMVNMIALGVATLAQHPDQLAQLKANPSLAPQF------------------ 274
Query: 351 AVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKP 410
V+E R H A L I R A DV I +V ++ + + RD +ENP F
Sbjct: 275 --VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNM 332
Query: 411 ERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
R K + + FG G C LA L + +L + F
Sbjct: 333 NR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 13/122 (10%)
Query: 353 VKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPER 412
V+E LR P V I R V+I ++ +G V V + RD +++P SF P+R
Sbjct: 244 VEEALRFSPPVMRTI-RVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR 302
Query: 413 FLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFDWKLESKVTTENMD 472
+ FG+G +C G PLA + L K F +++ V E +D
Sbjct: 303 TPN----------PHLSFGSGIHLCLGAPLARLEARIALEEFAKKF--RVKEIVKKEKID 350
Query: 473 ME 474
E
Sbjct: 351 NE 352
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 38/196 (19%)
Query: 264 FVGSKDMLDTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSK 323
V ++D D+L SE E +D L + L AG E+T++ + + V+ L
Sbjct: 229 LVQARDQQDSL---SEQELLD------LAIGLLVAGYESTTTQI----ADFVY----LLM 271
Query: 324 ARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHP-AVPLLIPRKASVDVQISGFIV 382
R EL +Q+ + R + + V+E R P V PR A DV + G +
Sbjct: 272 TRPELRRQL----------LDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTI 321
Query: 383 PKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPL 442
G VL + A RD + + + +DV + + FG G C G PL
Sbjct: 322 RAGEPVLASTGAANRDQAQFPDADR----------IDVDRTPNQHLGFGHGVHHCLGAPL 371
Query: 443 AIRMLHLMLGSLIKSF 458
A L + L L++
Sbjct: 372 ARVELQVALEVLLQRL 387
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 38/196 (19%)
Query: 264 FVGSKDMLDTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSK 323
V ++D D+L SE E +D L + L AG E+T++ + + V+ L
Sbjct: 229 LVQARDQQDSL---SEQELLD------LAIGLLVAGYESTTTQI----ADFVY----LLM 271
Query: 324 ARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHP-AVPLLIPRKASVDVQISGFIV 382
R EL +Q+ + R + + V+E R P V PR A DV + G +
Sbjct: 272 TRPELRRQL----------LDRPELIPSAVEELTRWVPLGVGTAAPRYAVEDVTLRGVTI 321
Query: 383 PKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPL 442
G VL + A RD + + + +DV + + FG G C G PL
Sbjct: 322 RAGEPVLASTGAANRDQAQFPDADR----------IDVDRTPNQHLGFGHGVHHCLGAPL 371
Query: 443 AIRMLHLMLGSLIKSF 458
A L + L L++
Sbjct: 372 ARVELQVALEVLLQRL 387
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 86/210 (40%), Gaps = 41/210 (19%)
Query: 251 FIYQRLKQRQEHGFVGSKDMLDTLLNIS-ESEKIDRNDFKHLFLDLFAAGAETTSSTLEW 309
I +K +E ++D++ L+ + EK+ ++F + L AG ETT +++
Sbjct: 203 LISYAMKMAEERAVNPTEDIVTKLIEADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITH 262
Query: 310 ALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPL-LIP 368
+ +P+ + EL K K P +D E +R A P+
Sbjct: 263 GMIAFAQNPD-----QWELYK---KERPETAAD------------EIVRW--ATPVSAFQ 300
Query: 369 RKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFK----PERFLGLDVDVKGRN 424
R A DV++ G + KG +V+++ + D +E+P++F P +G
Sbjct: 301 RTALEDVELGGVQIKKGQRVVMSYRSANFDEEVFEDPHTFNILRSPNPHVGFG------- 353
Query: 425 FELIPFGAGRRICPGLPLAIRMLHLMLGSL 454
G G C G LA ++L+ ++
Sbjct: 354 ------GTGAHYCIGANLARMTINLIFNAI 377
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 95/220 (43%), Gaps = 41/220 (18%)
Query: 277 ISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGN 336
+++ +I ++ L L +AG +TT + + A+ L P L + RS+
Sbjct: 228 FTDTGEITPDEAPLLVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSD--------- 278
Query: 337 PMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIG 396
+AR + +AV R V R + +V++ G ++ +G +VL+ +
Sbjct: 279 ----PTLARNAFEEAV-----RFESPVQTFF-RTTTREVELGGAVIGEGEKVLMFLGSAN 328
Query: 397 RDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIK 456
RD W +P + D+ + + FG+G +C G +A +ML +L +
Sbjct: 329 RDPRRWSDPDLY----------DITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALAR 378
Query: 457 SFDWKLESKVTTENMD--MEEKFGITLQ--KAQPLRVVPV 492
KV ++D ++ +F TL+ ++ P+++ P
Sbjct: 379 --------KVAAIDIDGPVKRRFNNTLRGLESLPVKLTPA 410
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 79/180 (43%), Gaps = 29/180 (16%)
Query: 277 ISESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGN 336
S++ +I + L L +AG +TT + + A+ L P+ ++ R++
Sbjct: 230 FSDTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRAD--------- 280
Query: 337 PMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIG 396
+AR + +AV R V R + DV+++G + +G +VL+ +
Sbjct: 281 ----PSLARNAFEEAV-----RFESPVQTFF-RTTTRDVELAGATIGEGEKVLMFLGSAN 330
Query: 397 RDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIK 456
RD W++ P+R+ D+ + + FG+G +C G +A ++L +L +
Sbjct: 331 RDPRRWDD-----PDRY-----DITRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAALAR 380
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 349 LQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSF 408
L +V+E +R V + R A+ D ++ G + G +++N A D + + P F
Sbjct: 322 LPGIVEEAIRWTTPVQHFM-RTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKF 380
Query: 409 KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSFD 459
P R R+ + FGAG C GL LA + ++L L+ D
Sbjct: 381 DPTR-------PANRH---LAFGAGSHQCLGLHLARLEMRVLLDVLLDRVD 421
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 30/176 (17%)
Query: 270 MLDTLLNISE--SEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSE 327
+L +LL +S+ +++ + + + + L AG ETT + + + L+ P+
Sbjct: 206 LLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-------- 257
Query: 328 LEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQ 387
++++ +P + + V+E LR V R + DV SG +P G
Sbjct: 258 -QRKLLAEDPS---------LISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEM 307
Query: 388 VLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLA 443
V++ A RDA + +P+R L + D G F FG G C G LA
Sbjct: 308 VMLGLAAANRDAD-----WMPEPDR-LDITRDASGGVF----FGHGIHFCLGAQLA 353
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 30/176 (17%)
Query: 270 MLDTLLNISE--SEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSE 327
+L +LL +S+ +++ + + + + L AG ETT + + + L+ P+
Sbjct: 206 LLSSLLAVSDMDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-------- 257
Query: 328 LEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQ 387
++++ +P + + V+E LR V R + DV SG +P G
Sbjct: 258 -QRKLLAEDPS---------LISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEM 307
Query: 388 VLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLA 443
V++ A RDA + +P+R L + D G F FG G C G LA
Sbjct: 308 VMLGLAAANRDAD-----WMPEPDR-LDITRDASGGVF----FGHGIHFCLGAQLA 353
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 99/248 (39%), Gaps = 40/248 (16%)
Query: 218 VSDFF--PMLRKLDIQGVRRRLSR--HHIKILEV----LDRFIYQRLKQRQEHGFVGSKD 269
+SD F P+ R+ + Q + + R E L +YQ +++R+ + D
Sbjct: 151 ISDLFGVPVERRAEFQDIAEAMMRVDQDAAATEAAGMRLGGLLYQLVQERRANP---GDD 207
Query: 270 MLDTLLNISESEKIDRNDF-KHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSEL 328
++ L+ + + + + F + L A +TT+ + L+ SP+ L+ R
Sbjct: 208 LISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLR--- 264
Query: 329 EKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQV 388
E GN V+E LR R A+ DV++ G + KG QV
Sbjct: 265 EDPSLVGN---------------AVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQV 309
Query: 389 LVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLH 448
+ + A D + E +PERF D+ R + FG G C G LA L
Sbjct: 310 VAHVLAADFDPAFVE-----EPERF-----DITRRPAPHLAFGFGAHQCIGQQLARIELQ 359
Query: 449 LMLGSLIK 456
++ +L +
Sbjct: 360 IVFETLFR 367
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 99/248 (39%), Gaps = 40/248 (16%)
Query: 218 VSDFF--PMLRKLDIQGVRRRLSR--HHIKILEV----LDRFIYQRLKQRQEHGFVGSKD 269
+SD F P+ R+ + Q + + R E L +YQ +++R+ + D
Sbjct: 151 ISDLFGVPVERRAEFQDIAEAMMRVDQDAAATEAAGMRLGGLLYQLVQERRANP---GDD 207
Query: 270 MLDTLLNISESEKIDRNDF-KHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSEL 328
++ L+ + + + + F + L A +TT+ + L+ SP+ L+ R
Sbjct: 208 LISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLR--- 264
Query: 329 EKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQV 388
E GN V+E LR R A+ DV++ G + KG QV
Sbjct: 265 EDPSLVGN---------------AVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQV 309
Query: 389 LVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLH 448
+ + A D + E +PERF D+ R + FG G C G LA L
Sbjct: 310 VAHVLAADFDPAFVE-----EPERF-----DITRRPAPHLAFGFGAHQCIGQQLARIELQ 359
Query: 449 LMLGSLIK 456
++ +L +
Sbjct: 360 IVFETLFR 367
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 99/248 (39%), Gaps = 40/248 (16%)
Query: 218 VSDFF--PMLRKLDIQGVRRRLSR--HHIKILEV----LDRFIYQRLKQRQEHGFVGSKD 269
+SD F P+ R+ + Q + + R E L +YQ +++R+ + D
Sbjct: 151 ISDLFGVPVERRAEFQDIAEAMMRVDQDAAATEAAGMRLGGLLYQLVQERRANP---GDD 207
Query: 270 MLDTLLNISESEKIDRNDF-KHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSEL 328
++ L+ + + + + F + L A +TT+ + L+ SP+ L+ R
Sbjct: 208 LISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLR--- 264
Query: 329 EKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQV 388
E GN V+E LR R A+ DV++ G + KG QV
Sbjct: 265 EDPSLVGN---------------AVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQV 309
Query: 389 LVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLH 448
+ + A D + E +PERF D+ R + FG G C G LA L
Sbjct: 310 VAHVLAADFDPAFVE-----EPERF-----DITRRPAPHLAFGFGAHQCIGQQLARIELQ 359
Query: 449 LMLGSLIK 456
++ +L +
Sbjct: 360 IVFETLFR 367
>pdb|3IVY|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, P212121 Crystal Form
pdb|3IW0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, C2221 Crystal Form
pdb|3IW1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Androstenedione
pdb|3IW2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Econazole
Length = 433
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 83/205 (40%), Gaps = 41/205 (20%)
Query: 256 LKQRQEHGFVGSKDMLDTLLNIS-ESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTEL 314
+K +E + D++ L+ + EK+ ++F + L AG ETT +++ +
Sbjct: 225 MKMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAF 284
Query: 315 VHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLL-IPRKASV 373
P+ + EL K++ P +D E +R A P+ R A
Sbjct: 285 AEHPD-----QWELYKKV---RPETAAD------------EIVRW--ATPVTAFQRTALR 322
Query: 374 DVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSF----KPERFLGLDVDVKGRNFELIP 429
D ++SG + KG +V++ + D +++P++F P +G
Sbjct: 323 DYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRNPNPHVGFG------------ 370
Query: 430 FGAGRRICPGLPLAIRMLHLMLGSL 454
G G C G LA ++L+ ++
Sbjct: 371 -GTGAHYCIGANLARMTINLIFNAV 394
>pdb|2X5W|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Substrate Cholest-4-En-3-One
Length = 440
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 83/205 (40%), Gaps = 41/205 (20%)
Query: 256 LKQRQEHGFVGSKDMLDTLLNIS-ESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTEL 314
+K +E + D++ L+ + EK+ ++F + L AG ETT +++ +
Sbjct: 232 MKMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAF 291
Query: 315 VHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLL-IPRKASV 373
P+ + EL K++ P +D E +R A P+ R A
Sbjct: 292 AEHPD-----QWELYKKV---RPETAAD------------EIVRW--ATPVTAFQRTALR 329
Query: 374 DVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSF----KPERFLGLDVDVKGRNFELIP 429
D ++SG + KG +V++ + D +++P++F P +G
Sbjct: 330 DYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRNPNPHVGFG------------ 377
Query: 430 FGAGRRICPGLPLAIRMLHLMLGSL 454
G G C G LA ++L+ ++
Sbjct: 378 -GTGAHYCIGANLARMTINLIFNAV 401
>pdb|2XN8|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125
Length = 423
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 83/205 (40%), Gaps = 41/205 (20%)
Query: 256 LKQRQEHGFVGSKDMLDTLLNIS-ESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTEL 314
+K +E + D++ L+ + EK+ ++F + L AG ETT +++ +
Sbjct: 215 MKMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAF 274
Query: 315 VHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLL-IPRKASV 373
P+ + EL K++ P +D E +R A P+ R A
Sbjct: 275 AEHPD-----QWELYKKV---RPETAAD------------EIVRW--ATPVTAFQRTALR 312
Query: 374 DVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSF----KPERFLGLDVDVKGRNFELIP 429
D ++SG + KG +V++ + D +++P++F P +G
Sbjct: 313 DYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRNPNPHVGFG------------ 360
Query: 430 FGAGRRICPGLPLAIRMLHLMLGSL 454
G G C G LA ++L+ ++
Sbjct: 361 -GTGAHYCIGANLARMTINLIFNAV 384
>pdb|2XC3|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cyp125 Bound
To The Reverse Type I Inhibitor
Length = 424
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 83/205 (40%), Gaps = 41/205 (20%)
Query: 256 LKQRQEHGFVGSKDMLDTLLNIS-ESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTEL 314
+K +E + D++ L+ + EK+ ++F + L AG ETT +++ +
Sbjct: 216 MKMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAF 275
Query: 315 VHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLL-IPRKASV 373
P+ + EL K++ P +D E +R A P+ R A
Sbjct: 276 AEHPD-----QWELYKKV---RPETAAD------------EIVRW--ATPVTAFQRTALR 313
Query: 374 DVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSF----KPERFLGLDVDVKGRNFELIP 429
D ++SG + KG +V++ + D +++P++F P +G
Sbjct: 314 DYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRNPNPHVGFG------------ 361
Query: 430 FGAGRRICPGLPLAIRMLHLMLGSL 454
G G C G LA ++L+ ++
Sbjct: 362 -GTGAHYCIGANLARMTINLIFNAV 385
>pdb|2X5L|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125, Alternative Crystal
Form
Length = 431
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 81/205 (39%), Gaps = 41/205 (20%)
Query: 256 LKQRQEHGFVGSKDMLDTLLNIS-ESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTEL 314
+K +E + D++ L+ + EK+ ++F + L AG ETT +++ +
Sbjct: 223 MKMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAF 282
Query: 315 VHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLL-IPRKASV 373
P+ + EL K++ + E +R A P+ R A
Sbjct: 283 AEHPD-----QWELYKKVRP---------------ETAADEIVRW--ATPVTAFQRTALR 320
Query: 374 DVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSF----KPERFLGLDVDVKGRNFELIP 429
D ++SG + KG +V++ + D +++P++F P +G
Sbjct: 321 DYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRNPNPHVGFG------------ 368
Query: 430 FGAGRRICPGLPLAIRMLHLMLGSL 454
G G C G LA ++L+ ++
Sbjct: 369 -GTGAHYCIGANLARMTINLIFNAV 392
>pdb|1VPR|A Chain A, Crystal Structure Of A Luciferase Domain From The
Dinoflagellate Lingulodinium Polyedrum
Length = 374
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 19/99 (19%)
Query: 18 VKALKSFSRG--SIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTT 75
V K F G ++KLP GP PWP LP+ G+ P + +HG +++ GQ
Sbjct: 123 VAXCKGFDYGDKTLKLPCGPLPWPA--GLPEPGYVPKTN-----PLHGRWITVSGGQAAF 175
Query: 76 V--VISSASMAKQVLQDHDAALCNRNVPDSVSSHQKGEY 112
+ I S + AA N+ V D+ G Y
Sbjct: 176 IKEAIKSGMLG--------AAEANKIVADTDHHQTGGXY 206
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 71/190 (37%), Gaps = 28/190 (14%)
Query: 251 FIYQRLKQRQEHGFVGSKDML-DTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTLEW 309
++ R+ + E V D L D+LL+ + + +I ++ L +A G +
Sbjct: 185 YLSARVAEMLEDKRVNPGDGLADSLLDAARAGEITESEAIATILVFYAVGHMAIGYLIAS 244
Query: 310 ALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPR 369
+ PE + R++ + A++ E +R+ P L R
Sbjct: 245 GIELFARRPEVFTAFRNDESAR------------------AAIINEMVRMDPP-QLSFLR 285
Query: 370 KASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIP 429
+ DV+I G ++ G+ + A RD +++P F R RN +
Sbjct: 286 FPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR-----PPAASRN---LS 337
Query: 430 FGAGRRICPG 439
FG G C G
Sbjct: 338 FGLGPHSCAG 347
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 28/159 (17%)
Query: 298 AGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETL 357
AG ETT+S + + L+ PE ++ R + + + A V E L
Sbjct: 249 AGRETTTSMIALSTLLLLDRPELPAELRKDPD------------------LMPAAVDELL 290
Query: 358 RLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLD 417
R+ + R A+ D+++SG VP V+ D +++ PER
Sbjct: 291 RVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDD-----PER----- 340
Query: 418 VDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIK 456
VD + + FG G C G LA L + L +L++
Sbjct: 341 VDFHRTDNHHVAFGYGVHQCVGQHLARLELEVALETLLR 379
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 37/181 (20%)
Query: 279 ESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPM 338
+ E++ + F+ L AG ETT + + + L PE + S+ +
Sbjct: 255 DGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDG-------- 306
Query: 339 EESDIARLPYLQAVVKETLRLHPAVPLLIPRKA-SVDVQISGFIVPKGAQVLVNAWAIGR 397
V+E +R A P++ R+ + D+++ G + G +V + + R
Sbjct: 307 ---------LAPTAVEEIVRW--ASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANR 355
Query: 398 DASTWENPYSF----KPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGS 453
D S + +P++F P LG G G C G LA R + +
Sbjct: 356 DESKFADPWTFDLARNPNPHLGFG-------------GGGAHFCLGANLARREIRVAFDE 402
Query: 454 L 454
L
Sbjct: 403 L 403
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 64/165 (38%), Gaps = 31/165 (18%)
Query: 295 LFAAGAETTSSTLEWALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVK 354
L AG ETT++ L A+ L + L + R+ E A V+
Sbjct: 251 LLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPEST------------------PAAVE 292
Query: 355 ETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFL 414
E +R P V + R A D+++ +P+G++V+ + RD P RF
Sbjct: 293 ELMRYDPPV-QAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRD-----------PARFP 340
Query: 415 GLDV-DVKGRNFELIPFGAGRRICPGLPLAIRMLHLMLGSLIKSF 458
DV DV + FG G C G LA + L +L+
Sbjct: 341 DPDVLDVHRAAERQVGFGLGIHYCLGATLARAEAEIGLRALLDGI 385
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 71/190 (37%), Gaps = 28/190 (14%)
Query: 251 FIYQRLKQRQEHGFVGSKDML-DTLLNISESEKIDRNDFKHLFLDLFAAGAETTSSTLEW 309
++ R+ + E V D L D+LL+ + + +I ++ L +A G +
Sbjct: 183 YLSARVAEMLEDKRVNPGDGLADSLLDAARAGEITESEAIATILVFYAVGHMAIGYLIAS 242
Query: 310 ALTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPR 369
+ PE + R++ + A++ E +R+ P L R
Sbjct: 243 GIELFARRPEVFTAFRNDESAR------------------AAIINEMVRMDPP-QLSFLR 283
Query: 370 KASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIP 429
+ DV+I G ++ G+ + A RD +++P F R RN +
Sbjct: 284 FPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR-----PPAASRN---LS 335
Query: 430 FGAGRRICPG 439
FG G C G
Sbjct: 336 FGLGPHSCAG 345
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 348 YLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYS 407
YL+A+ +E LR P V + RK V++ + +G V V + RD + +
Sbjct: 240 YLKAI-EEALRYSPPV-MRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEK 297
Query: 408 FKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLA 443
F P+R N L FG+G +C G PLA
Sbjct: 298 FIPDR---------NPNPHL-SFGSGIHLCLGAPLA 323
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 348 YLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYS 407
YL+A+ +E LR P V + RK V++ + +G V V + RD + +
Sbjct: 240 YLKAI-EEALRYSPPV-MRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEK 297
Query: 408 FKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLA 443
F P+R N L FG+G +C G PLA
Sbjct: 298 FIPDR---------NPNPHL-SFGSGIHLCLGAPLA 323
>pdb|1T85|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam Mutant (L358pC334A)
pdb|1T86|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
pdb|1T86|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
Length = 414
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 90/244 (36%), Gaps = 36/244 (14%)
Query: 209 LMVESGKPNVSDFFPMLRKLDIQGVRRRLSRHHIKILEVLDRFIYQRLKQRQEHGFVGSK 268
M+ +G P + P L+ L Q R S + E L ++ ++QR++
Sbjct: 163 FMLLAGLPE--EDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKP---GT 217
Query: 269 DMLDTLLNIS-ESEKIDRNDFKHLFLDLFAAGAETTSSTLEWALTELVHSPEALSKARSE 327
D + + N I ++ K + L G +T + L +++ L SPE R E
Sbjct: 218 DAISIVANGQVNGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEH----RQE 273
Query: 328 LEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPLLIPRKASVDVQISGFIVPKGAQ 387
L I R + A +E LR V R + D + G + KG Q
Sbjct: 274 L--------------IERPERIPAACEELLRRFSLV--ADGRILTSDYEFHGVQLKKGDQ 317
Query: 388 VLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELIPFGAGRRICPGLPLAIRML 447
+L+ G D P + VD + FG G +CPG LA R +
Sbjct: 318 ILLPQMLSGLDERENAAP----------MHVDFSRQKVSHTTFGHGSHLCPGQHLARREI 367
Query: 448 HLML 451
+ L
Sbjct: 368 IVTL 371
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 10/75 (13%)
Query: 369 RKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELI 428
R A DV+I G + G V V+ A RD + +P ER V
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVS--------- 345
Query: 429 PFGAGRRICPGLPLA 443
FG G CPG LA
Sbjct: 346 -FGFGPHYCPGGMLA 359
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 10/75 (13%)
Query: 369 RKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELI 428
R A DV+I G + G V V+ A RD + +P ER V
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVS--------- 345
Query: 429 PFGAGRRICPGLPLA 443
FG G CPG LA
Sbjct: 346 -FGFGPHYCPGGMLA 359
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 10/75 (13%)
Query: 369 RKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELI 428
R A DV+I G + G V V+ A RD + +P ER V
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVS--------- 345
Query: 429 PFGAGRRICPGLPLA 443
FG G CPG LA
Sbjct: 346 -FGFGPHYCPGGMLA 359
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 10/75 (13%)
Query: 369 RKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELI 428
R A DV+I G + G V V+ A RD + +P ER V
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVS--------- 345
Query: 429 PFGAGRRICPGLPLA 443
FG G CPG LA
Sbjct: 346 -FGFGPHYCPGGMLA 359
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 10/75 (13%)
Query: 369 RKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELI 428
R A DV+I G + G V V+ A RD + +P ER V
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVS--------- 345
Query: 429 PFGAGRRICPGLPLA 443
FG G CPG LA
Sbjct: 346 -FGFGPHYCPGGMLA 359
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 10/75 (13%)
Query: 369 RKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELI 428
R A DV+I G + G V V+ A RD + +P ER V
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVS--------- 345
Query: 429 PFGAGRRICPGLPLA 443
FG G CPG LA
Sbjct: 346 -FGFGPHYCPGGMLA 359
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 10/75 (13%)
Query: 369 RKASVDVQISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPERFLGLDVDVKGRNFELI 428
R A DV+I G + G V V+ A RD + +P ER V
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVS--------- 345
Query: 429 PFGAGRRICPGLPLA 443
FG G CPG LA
Sbjct: 346 -FGFGPHYCPGGMLA 359
>pdb|1G18|A Chain A, Reca-Adp-Alf4 Complex
pdb|1G19|A Chain A, Structure Of Reca Protein
pdb|1MO3|A Chain A, Reca-Adp Complex
pdb|1MO4|A Chain A, Reca-Atp-Gamma-S Complex
pdb|1MO5|A Chain A, Reca-Atp-Gamma-S-Mg Complex
pdb|1MO6|A Chain A, Reca-datp-mg Complex
Length = 350
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 311 LTELVHSPEALSKARSELEKQIGKGNPMEESDIARLPYLQAVVKETLRLHPAVPL-LIPR 369
+T+ +AL A +++EK GKG+ M D AR P + + ++ L A+ + +PR
Sbjct: 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQP-ISVIPTGSIALDVALGIGGLPR 59
Query: 370 KASVDV---QISGFIVPKGAQVLVNAWAIGRDASTWENPYSFKPE--RFLGLDVD 419
+++ + SG + NA A G A+ + ++ P+ + LG+D D
Sbjct: 60 GRVIEIYGPESSGKTTVA-LHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTD 113
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,521,698
Number of Sequences: 62578
Number of extensions: 588440
Number of successful extensions: 2156
Number of sequences better than 100.0: 204
Number of HSP's better than 100.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 1810
Number of HSP's gapped (non-prelim): 224
length of query: 494
length of database: 14,973,337
effective HSP length: 103
effective length of query: 391
effective length of database: 8,527,803
effective search space: 3334370973
effective search space used: 3334370973
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)