Query 011072
Match_columns 494
No_of_seqs 192 out of 391
Neff 3.4
Searched_HMMs 13730
Date Mon Mar 25 20:13:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011072.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/011072hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2pa7a1 b.82.1.1 (A:2-136) dTD 17.2 20 0.0015 28.8 1.2 17 426-442 44-60 (135)
2 d1gt1a_ b.60.1.1 (A:) Odorant- 8.5 67 0.0049 25.0 1.8 22 120-141 117-138 (158)
3 d1e50b_ b.54.1.1 (B:) Core bin 8.1 58 0.0042 27.4 1.2 9 126-134 3-11 (134)
4 d2ohwa1 d.79.8.1 (A:3-130) Unc 7.4 40 0.0029 27.8 -0.2 18 120-137 12-29 (128)
5 d1a7ge_ d.58.8.1 (E:) Papillom 7.2 73 0.0053 24.5 1.3 17 121-137 47-66 (82)
6 d1r8ha_ d.58.8.1 (A:) Papillom 7.1 73 0.0053 24.8 1.2 17 121-137 49-68 (87)
7 d2bopa_ d.58.8.1 (A:) Papillom 6.9 75 0.0055 24.5 1.2 11 127-137 57-67 (85)
8 d1e5pa_ b.60.1.1 (A:) Aphrodis 6.9 78 0.0057 24.5 1.4 24 118-141 107-131 (149)
9 d2omoa1 d.58.4.11 (A:1-98) Hyp 6.7 1.1E+02 0.0084 22.0 2.2 20 122-141 6-25 (98)
10 d2q79a1 d.58.8.1 (A:284-362) P 6.4 83 0.006 23.9 1.2 11 127-137 54-64 (79)
No 1
>d2pa7a1 b.82.1.1 (A:2-136) dTDP-6-deoxy-3,4-keto-hexulose isomerase FdtA {Aneurinibacillus thermoaerophilus [TaxId: 143495]}
Probab=17.21 E-value=20 Score=28.84 Aligned_cols=17 Identities=12% Similarity=0.196 Sum_probs=14.9
Q ss_pred hcCceeecccceeeecc
Q 011072 426 KQSWRYHRKYNTWFQRH 442 (494)
Q Consensus 426 ~RgWRYHKe~k~Wf~R~ 442 (494)
-|||.||++...|+.-.
T Consensus 44 iRG~H~Hk~~~q~~~vi 60 (135)
T d2pa7a1 44 PRGFHAHKKLEQVLVCL 60 (135)
T ss_dssp CEEEEEESSCCEEEEEE
T ss_pred EEeeeccccccEEEEec
Confidence 49999999999998765
No 2
>d1gt1a_ b.60.1.1 (A:) Odorant-binding protein {Cow (Bos taurus) [TaxId: 9913]}
Probab=8.52 E-value=67 Score=25.02 Aligned_cols=22 Identities=14% Similarity=0.208 Sum_probs=18.2
Q ss_pred cccccccCchhHHHHHHHHHHH
Q 011072 120 FRGRTEIAPDQREKFLQRLQQV 141 (494)
Q Consensus 120 ~~~r~ei~~dq~ek~lq~~qq~ 141 (494)
+-+|+++.|+.+|||.+..+-.
T Consensus 117 L~r~~~~~~e~~e~F~~~~~~~ 138 (158)
T d1gt1a_ 117 LFVKLNVEDEDLEKFWKLTEDK 138 (158)
T ss_dssp EEEECCCCHHHHHHHHHHHHHT
T ss_pred EecCCCcCHHHHHHHHHHHHHc
Confidence 6778999999999999776543
No 3
>d1e50b_ b.54.1.1 (B:) Core binding factor beta, CBF {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.07 E-value=58 Score=27.36 Aligned_cols=9 Identities=67% Similarity=1.232 Sum_probs=4.2
Q ss_pred cCchhHHHH
Q 011072 126 IAPDQREKF 134 (494)
Q Consensus 126 i~~dq~ek~ 134 (494)
+.||||.||
T Consensus 3 VVpDQk~KF 11 (134)
T d1e50b_ 3 VVPDQRSKF 11 (134)
T ss_dssp CCSCHHHHH
T ss_pred ccchhhhcc
Confidence 344455444
No 4
>d2ohwa1 d.79.8.1 (A:3-130) Uncharacterized protein YueI {Bacillus subtilis [TaxId: 1423]}
Probab=7.41 E-value=40 Score=27.83 Aligned_cols=18 Identities=39% Similarity=0.623 Sum_probs=15.4
Q ss_pred cccccccCchhHHHHHHH
Q 011072 120 FRGRTEIAPDQREKFLQR 137 (494)
Q Consensus 120 ~~~r~ei~~dq~ek~lq~ 137 (494)
.+|-+++-||+|.|||=-
T Consensus 12 ~~G~p~~kPDEqr~yLGt 29 (128)
T d2ohwa1 12 MYGPLETKPDERHLFLGS 29 (128)
T ss_dssp CCSCCSSHHHHHHHTTTC
T ss_pred CCCCCCCCHHHHHHhccc
Confidence 578999999999999853
No 5
>d1a7ge_ d.58.8.1 (E:) Papillomavirus-1 E2 protein {Human papillomavirus type 31 [TaxId: 10585]}
Probab=7.21 E-value=73 Score=24.48 Aligned_cols=17 Identities=24% Similarity=0.489 Sum_probs=12.4
Q ss_pred cccccc---CchhHHHHHHH
Q 011072 121 RGRTEI---APDQREKFLQR 137 (494)
Q Consensus 121 ~~r~ei---~~dq~ek~lq~ 137 (494)
++|--| +.+|||+||..
T Consensus 47 ~ar~lv~F~s~~QR~~FL~~ 66 (82)
T d1a7ge_ 47 NAIVTLTYISTSQRDDFLNT 66 (82)
T ss_dssp TEEEEEECSCHHHHHHHHHH
T ss_pred ceEEEEEECCHHHHHHHHhc
Confidence 455433 68999999975
No 6
>d1r8ha_ d.58.8.1 (A:) Papillomavirus-1 E2 protein {Human papillomavirus type 6a [TaxId: 37122]}
Probab=7.06 E-value=73 Score=24.75 Aligned_cols=17 Identities=24% Similarity=0.497 Sum_probs=12.5
Q ss_pred cccccc---CchhHHHHHHH
Q 011072 121 RGRTEI---APDQREKFLQR 137 (494)
Q Consensus 121 ~~r~ei---~~dq~ek~lq~ 137 (494)
++|--| +..|||+||..
T Consensus 49 ~ar~lv~F~s~~QR~~FL~~ 68 (87)
T d1r8ha_ 49 HAIVTVTYHSEEQRQQFLNV 68 (87)
T ss_dssp CEEEEEECSSHHHHHHHHHH
T ss_pred ceEEEEEECCHHHHHHHHhc
Confidence 566444 58899999975
No 7
>d2bopa_ d.58.8.1 (A:) Papillomavirus-1 E2 protein {Bovine papillomavirus type 1 [TaxId: 10559]}
Probab=6.87 E-value=75 Score=24.52 Aligned_cols=11 Identities=45% Similarity=0.966 Sum_probs=9.5
Q ss_pred CchhHHHHHHH
Q 011072 127 APDQREKFLQR 137 (494)
Q Consensus 127 ~~dq~ek~lq~ 137 (494)
+..|||+||..
T Consensus 57 s~~QR~~FL~~ 67 (85)
T d2bopa_ 57 SPSQRQDFLKH 67 (85)
T ss_dssp SHHHHHHHHHH
T ss_pred CHHHHHHHHhc
Confidence 68999999975
No 8
>d1e5pa_ b.60.1.1 (A:) Aphrodisin, a sex pheromone {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=6.86 E-value=78 Score=24.49 Aligned_cols=24 Identities=17% Similarity=0.332 Sum_probs=19.3
Q ss_pred CCcccc-cccCchhHHHHHHHHHHH
Q 011072 118 GQFRGR-TEIAPDQREKFLQRLQQV 141 (494)
Q Consensus 118 ~q~~~r-~ei~~dq~ek~lq~~qq~ 141 (494)
.++-|| ++++|+..|+|.+-.+.+
T Consensus 107 ~~L~~R~~~~s~e~~e~F~~~~~~~ 131 (149)
T d1e5pa_ 107 IVVAGKGNALTPEENEILVQFAHEK 131 (149)
T ss_dssp EEEEESSSCCCHHHHHHHHHHHHHT
T ss_pred EEEEcCCCCCCHHHHHHHHHHHHHc
Confidence 467778 889999999998876654
No 9
>d2omoa1 d.58.4.11 (A:1-98) Hypothetical protein NE0621 {Nitrosomonas europaea [TaxId: 915]}
Probab=6.67 E-value=1.1e+02 Score=21.96 Aligned_cols=20 Identities=15% Similarity=0.180 Sum_probs=15.5
Q ss_pred cccccCchhHHHHHHHHHHH
Q 011072 122 GRTEIAPDQREKFLQRLQQV 141 (494)
Q Consensus 122 ~r~ei~~dq~ek~lq~~qq~ 141 (494)
+|-+|.|+.++.|++.++.+
T Consensus 6 ~~~~vkp~~~~~f~~~~~~~ 25 (98)
T d2omoa1 6 VYASVKTDKTEAFKEATRMN 25 (98)
T ss_dssp EEEEBCGGGHHHHHHHHHHH
T ss_pred EEEEECcCcHHHHHHHHHHH
Confidence 45677888888888888777
No 10
>d2q79a1 d.58.8.1 (A:284-362) Papillomavirus-1 E2 protein {Human papillomavirus type 16 [TaxId: 333760]}
Probab=6.43 E-value=83 Score=23.95 Aligned_cols=11 Identities=36% Similarity=0.598 Sum_probs=9.4
Q ss_pred CchhHHHHHHH
Q 011072 127 APDQREKFLQR 137 (494)
Q Consensus 127 ~~dq~ek~lq~ 137 (494)
+..|||+||..
T Consensus 54 s~~QR~~FL~~ 64 (79)
T d2q79a1 54 SEWQRDQFLSQ 64 (79)
T ss_dssp SHHHHHHHHHH
T ss_pred CHHHHHHHHhc
Confidence 57899999975
Done!