Query 011074
Match_columns 494
No_of_seqs 100 out of 115
Neff 2.3
Searched_HMMs 13730
Date Mon Mar 25 20:15:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011074.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/011074hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3b8ma1 d.58.60.1 (A:64-330) E 21.1 86 0.0062 27.1 6.5 47 274-320 136-182 (267)
2 d3b8oa1 d.58.60.1 (A:55-319) L 18.5 96 0.007 27.0 6.2 48 273-320 132-179 (265)
3 d3b8pa1 d.58.60.1 (A:54-292) C 16.5 75 0.0054 27.4 4.9 46 275-320 107-152 (239)
4 d1mjea2 a.171.1.1 (A:2752-2887 9.9 55 0.004 23.4 1.5 41 262-304 3-43 (49)
5 d1f5na1 a.114.1.1 (A:284-583) 7.4 3.5E+02 0.026 21.5 5.9 24 279-302 227-250 (300)
6 d1nkpa_ a.38.1.1 (A:) Myc prot 6.2 3.4E+02 0.025 19.3 4.7 35 280-315 51-85 (88)
7 d2awia1 a.35.1.11 (A:2-66) Prg 5.2 1.1E+02 0.0081 22.4 1.2 13 310-322 5-17 (65)
8 d1gvea_ c.1.7.1 (A:) Aflatoxin 4.7 1.3E+02 0.0093 25.6 1.5 24 308-331 301-324 (324)
9 d1eeja2 d.17.3.1 (A:1-60) Disu 4.4 1.5E+02 0.011 20.8 1.5 11 321-331 19-29 (60)
10 d1sbza_ c.34.1.1 (A:) Probable 4.2 1.9E+02 0.014 23.4 2.2 23 311-333 133-155 (186)
No 1
>d3b8ma1 d.58.60.1 (A:64-330) Enterochelin transport protein FepE {Escherichia coli [TaxId: 562]}
Probab=21.08 E-value=86 Score=27.12 Aligned_cols=47 Identities=26% Similarity=0.203 Sum_probs=40.8
Q ss_pred HHHHHhHhhHHHHHHHhhhHHHHHHhHHHHhhhhHHHHHHHHHhhcc
Q 011074 274 ERAERRKEFFSKLEEKIHAKEVEKSNLQEKSKESQEAEIKQLRKSLT 320 (494)
Q Consensus 274 ERAEKRKEFy~KLEEK~~AkE~EK~qlqAKsKEe~EAEIKkLRKSL~ 320 (494)
.|.+--.+|...++.|++..+.+...++.+.|+..+.+|.+|...|.
T Consensus 136 v~~~l~~~~~~~i~~~~~~l~~~~~~~~~~ak~~~~~~i~~l~~Al~ 182 (267)
T d3b8ma1 136 VVKESIENVRNKLEIKTQFEKEKLAQDRIKMKNQLDANIQRLNYSLD 182 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555778888999999999999999999999999999999987654
No 2
>d3b8oa1 d.58.60.1 (A:55-319) Lipopolysaccharide biosynthesis protein WzzE {Escherichia coli [TaxId: 562]}
Probab=18.53 E-value=96 Score=27.00 Aligned_cols=48 Identities=8% Similarity=0.142 Sum_probs=40.2
Q ss_pred hHHHHHhHhhHHHHHHHhhhHHHHHHhHHHHhhhhHHHHHHHHHhhcc
Q 011074 273 EERAERRKEFFSKLEEKIHAKEVEKSNLQEKSKESQEAEIKQLRKSLT 320 (494)
Q Consensus 273 dERAEKRKEFy~KLEEK~~AkE~EK~qlqAKsKEe~EAEIKkLRKSL~ 320 (494)
-.+.+--.+|...++.+++..+.+...++...|...+-+|.+|+..|.
T Consensus 132 ~~~~~l~~~l~~~i~~~~~~l~~~~~~~~~~ak~~~~~~I~~L~~AL~ 179 (265)
T d3b8oa1 132 RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK 179 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566778999999999999999999999999999999999997553
No 3
>d3b8pa1 d.58.60.1 (A:54-292) Chain length determinant protein WzzB {Salmonella typhimurium [TaxId: 90371]}
Probab=16.52 E-value=75 Score=27.38 Aligned_cols=46 Identities=13% Similarity=0.189 Sum_probs=39.8
Q ss_pred HHHHhHhhHHHHHHHhhhHHHHHHhHHHHhhhhHHHHHHHHHhhcc
Q 011074 275 RAERRKEFFSKLEEKIHAKEVEKSNLQEKSKESQEAEIKQLRKSLT 320 (494)
Q Consensus 275 RAEKRKEFy~KLEEK~~AkE~EK~qlqAKsKEe~EAEIKkLRKSL~ 320 (494)
+.+--.+|...++.+.+..+.+...++...|...+.+|.+|...|.
T Consensus 107 ~~~l~~~i~~~i~~~~~~l~~~~~~~~~~ak~~~~~~I~~l~~AL~ 152 (239)
T d3b8pa1 107 AKELEVDLKDNITLQTKTLQESLETQEVVAQEQKDLRIKQIEEALR 152 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555667888899999999999999999999999999999988664
No 4
>d1mjea2 a.171.1.1 (A:2752-2887) BRCA2 tower domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=9.91 E-value=55 Score=23.42 Aligned_cols=41 Identities=20% Similarity=0.222 Sum_probs=24.9
Q ss_pred cccccccccchhHHHHHhHhhHHHHHHHhhhHHHHHHhHHHHh
Q 011074 262 RSGVSGFNFRLEERAERRKEFFSKLEEKIHAKEVEKSNLQEKS 304 (494)
Q Consensus 262 ~T~~s~F~FrsdERAEKRKEFy~KLEEK~~AkE~EK~qlqAKs 304 (494)
+|....+.||.+ |+|.| |=-..-+-+.+.+|+--+.+|+..
T Consensus 3 k~~~G~~iFRn~-R~Eek-EA~k~a~~qqKklE~LftKIq~eF 43 (49)
T d1mjea2 3 KTVSGLYIFRSE-REEEK-EALRFAEAQQKKLEALFTKVHTEG 43 (49)
T ss_dssp ECTTSCEEEECG-GGTTH-HHHHHHHHHHHHHHHHHHHHCC--
T ss_pred ccCCCceeeecc-hHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667889875 55554 333455666677777777766654
No 5
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.39 E-value=3.5e+02 Score=21.55 Aligned_cols=24 Identities=17% Similarity=0.167 Sum_probs=10.7
Q ss_pred hHhhHHHHHHHhhhHHHHHHhHHH
Q 011074 279 RKEFFSKLEEKIHAKEVEKSNLQE 302 (494)
Q Consensus 279 RKEFy~KLEEK~~AkE~EK~qlqA 302 (494)
++++...+++.....+.++.+++.
T Consensus 227 ~~~~~~~~e~~~~~~ee~~~~l~~ 250 (300)
T d1f5na1 227 QRKNEQMMEQKERSYQEHLKQLTE 250 (300)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455444444444444433
No 6
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.23 E-value=3.4e+02 Score=19.31 Aligned_cols=35 Identities=14% Similarity=0.261 Sum_probs=20.8
Q ss_pred HhhHHHHHHHhhhHHHHHHhHHHHhhhhHHHHHHHH
Q 011074 280 KEFFSKLEEKIHAKEVEKSNLQEKSKESQEAEIKQL 315 (494)
Q Consensus 280 KEFy~KLEEK~~AkE~EK~qlqAKsKEe~EAEIKkL 315 (494)
.+|...|++.....+.++.+++.+. +.-..+|.+|
T Consensus 51 ~~yI~~L~~~~~~l~~~~~~l~~~~-~~L~~~l~~L 85 (88)
T d1nkpa_ 51 TAYILSVQAEEQKLISEEDLLRKRR-EQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence 3677788888777777766665443 2233344444
No 7
>d2awia1 a.35.1.11 (A:2-66) PrgX {Enterococcus faecalis [TaxId: 1351]}
Probab=5.17 E-value=1.1e+02 Score=22.42 Aligned_cols=13 Identities=31% Similarity=0.700 Sum_probs=10.5
Q ss_pred HHHHHHHhhcccc
Q 011074 310 AEIKQLRKSLTFK 322 (494)
Q Consensus 310 AEIKkLRKSL~FK 322 (494)
.-+||+||+|+|-
T Consensus 5 ~~lkqir~elnyh 17 (65)
T d2awia1 5 SVLKQIRQELNYH 17 (65)
T ss_dssp HHHHHHHHHTTCC
T ss_pred hHHHHHHHHhhhh
Confidence 4579999999874
No 8
>d1gvea_ c.1.7.1 (A:) Aflatoxin aldehyde reductase (akr7a1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=4.67 E-value=1.3e+02 Score=25.62 Aligned_cols=24 Identities=13% Similarity=0.440 Sum_probs=18.2
Q ss_pred HHHHHHHHHhhcccccCCCCCCCC
Q 011074 308 QEAEIKQLRKSLTFKATPMPSFYK 331 (494)
Q Consensus 308 ~EAEIKkLRKSL~FKAtPMPsFY~ 331 (494)
.++++++|.+-+....+|.|++|+
T Consensus 301 ~~e~l~~i~~~~~~~~~~~p~~~~ 324 (324)
T d1gvea_ 301 EPAVVDAFDQAWNLVAHECPNYFR 324 (324)
T ss_dssp CHHHHHHHHHHHHHHGGGCCCSCC
T ss_pred CHHHHHHHHHHHHhCCCCCCcccC
Confidence 355677777766667899999996
No 9
>d1eeja2 d.17.3.1 (A:1-60) Disulfide bond isomerase, DsbC, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=4.43 E-value=1.5e+02 Score=20.76 Aligned_cols=11 Identities=9% Similarity=0.392 Sum_probs=8.7
Q ss_pred cccCCCCCCCC
Q 011074 321 FKATPMPSFYK 331 (494)
Q Consensus 321 FKAtPMPsFY~ 331 (494)
-+.+|+|.||.
T Consensus 19 V~~spi~Glye 29 (60)
T d1eeja2 19 IQPAPVAGMKT 29 (60)
T ss_dssp EEECSSTTEEE
T ss_pred EecCCCCCeEE
Confidence 35789999996
No 10
>d1sbza_ c.34.1.1 (A:) Probable aromatic acid decarboxylase Pad1 {Escherichia coli O157:H7 [TaxId: 83334]}
Probab=4.19 E-value=1.9e+02 Score=23.40 Aligned_cols=23 Identities=30% Similarity=0.616 Sum_probs=18.2
Q ss_pred HHHHHHhhcccccCCCCCCCCCC
Q 011074 311 EIKQLRKSLTFKATPMPSFYKEP 333 (494)
Q Consensus 311 EIKkLRKSL~FKAtPMPsFY~ep 333 (494)
-|.+|+.-=.+=.-|||.||..+
T Consensus 133 N~~~L~~~G~~i~pp~~g~y~~p 155 (186)
T d1sbza_ 133 NMLALSRMGVAMVPPMPAFYNHP 155 (186)
T ss_dssp HHHHHHTTTCEECCCCCCCTTCC
T ss_pred HHHHHHHCCcEEeCCChhhhcCC
Confidence 46778887677778999999864
Done!