BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011075
(494 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SPA|A Chain A, Crystal Structure Of Human Mitochondrial Rna Polymerase
Length = 1134
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA---EKLWE 306
+NA+M+G+ R+GAF+++ V + G PD SY+ A+ C R+ ++A E+ E
Sbjct: 168 YNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAA--ALQCMGRQDQDAGTIERCLE 225
Query: 307 EMRDKNVE 314
+M + ++
Sbjct: 226 QMSQEGLK 233
>pdb|2BVT|A Chain A, The Structure Of A Modular Endo-Beta-1,4-Mannanase From
Cellulomonas Fimi Explains The Product Specificity Of
Glycoside Hydrolase Family 26 Mannanases.
pdb|2BVT|B Chain B, The Structure Of A Modular Endo-Beta-1,4-Mannanase From
Cellulomonas Fimi Explains The Product Specificity Of
Glycoside Hydrolase Family 26 Mannanases.
pdb|2BVY|A Chain A, The Structure And Characterization Of A Modular
Endo-Beta-1, 4-Mannanase From Cellulomonas Fimi
Length = 475
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV-GFYREGAFEKV 266
RG+G++ G++ + FGL + T G DVK V P V ++ L++ G R G E
Sbjct: 28 RGEGILFGHQ-HTTSFGLTTGPTDGTTSDVKNVTGDFPAVFGWDTLIIEGNERPGLAENT 86
Query: 267 ED 268
D
Sbjct: 87 RD 88
>pdb|2X2Y|A Chain A, Cellulomonas Fimi Endo-Beta-1,4-Mannanase Double Mutant
pdb|2X2Y|B Chain B, Cellulomonas Fimi Endo-Beta-1,4-Mannanase Double Mutant
Length = 475
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV-GFYREGAFEKV 266
RG+G++ G++ + FGL + T G DVK V P V ++ L++ G R G E
Sbjct: 28 RGEGILFGHQ-HTTSFGLTTGPTDGTTSDVKNVTGDFPAVFGWDTLIIEGNERPGLAENT 86
Query: 267 ED 268
D
Sbjct: 87 RD 88
>pdb|1PKM|A Chain A, The Refined Three-Dimensional Structure Of Cat Muscle (M1)
Pyruvate Kinase, At A Resolution Of 2.6 Angstroms
Length = 530
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEH---------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 13 QTQQLHAAMADTFLEHMCRLDIDSPPITARNT--GIICTIGPASRSVEILKEMIKSGMNV 70
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 71 ARLNFSHGTHEY 82
>pdb|3GQY|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GQY|B Chain B, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GQY|C Chain C, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GQY|D Chain D, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GR4|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GR4|B Chain B, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GR4|C Chain C, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GR4|D Chain D, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3H6O|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3H6O|B Chain B, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3H6O|C Chain C, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3H6O|D Chain D, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3ME3|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3ME3|B Chain B, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3ME3|C Chain C, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3ME3|D Chain D, Activator-Bound Structure Of Human Pyruvate Kinase M2
Length = 550
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEH---------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 33 QTQQLHAAMADTFLEHMCRLDIDSPPITARNT--GIICTIGPASRSVETLKEMIKSGMNV 90
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 91 ARLNFSHGTHEY 102
>pdb|3SRD|A Chain A, Human M2 Pyruvate Kinase In Complex With Fructose 1-6
Bisphosphate And Oxalate.
pdb|3SRD|B Chain B, Human M2 Pyruvate Kinase In Complex With Fructose 1-6
Bisphosphate And Oxalate.
pdb|3SRD|C Chain C, Human M2 Pyruvate Kinase In Complex With Fructose 1-6
Bisphosphate And Oxalate.
pdb|3SRD|D Chain D, Human M2 Pyruvate Kinase In Complex With Fructose 1-6
Bisphosphate And Oxalate.
pdb|3SRH|A Chain A, Human M2 Pyruvate Kinase
pdb|3SRH|B Chain B, Human M2 Pyruvate Kinase
pdb|3SRH|C Chain C, Human M2 Pyruvate Kinase
pdb|3SRH|D Chain D, Human M2 Pyruvate Kinase
Length = 551
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEH---------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 34 QTQQLHAAMADTFLEHMCRLDIDSPPITARNT--GIICTIGPASRSVETLKEMIKSGMNV 91
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 92 ARLNFSHGTHEY 103
>pdb|3G2G|A Chain A, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2
pdb|3G2G|B Chain B, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2
pdb|3G2G|C Chain C, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2
pdb|3G2G|D Chain D, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2
Length = 533
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEH---------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 16 QTQQLHAAMADTFLEHMCRLDIDSPPITARNT--GIICTIGPASRSVETLKEMIKSGMNV 73
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 74 ARLNFSHGTHEY 85
>pdb|4G1N|A Chain A, Pkm2 In Complex With An Activator
pdb|4G1N|B Chain B, Pkm2 In Complex With An Activator
pdb|4G1N|C Chain C, Pkm2 In Complex With An Activator
pdb|4G1N|D Chain D, Pkm2 In Complex With An Activator
Length = 518
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEH---------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 1 QTQQLHAAMADTFLEHMCRLDIDSPPITARNT--GIICTIGPASRSVETLKEMIKSGMNV 58
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 59 ARLNFSHGTHEY 70
>pdb|4B2D|D Chain D, Human Pkm2 With L-serine And Fbp Bound
Length = 548
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEH---------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 31 QTQQLHAAMADTFLEHMCRLDIDSPPITARNT--GIICTIGPASRSVETLKEMIKSGMNV 88
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 89 ARLNFSHGTHEY 100
>pdb|3BJF|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJF|B Chain B, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJF|C Chain C, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJF|D Chain D, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
Length = 518
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEH---------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 1 QTQQLHAAMADTFLEHMCRLDIDSPPITARNT--GIICTIGPASRSVETLKEMIKSGMNV 58
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 59 ARLNFSHGTHEY 70
>pdb|1ZJH|A Chain A, Structure Of Human Muscle Pyruvate Kinase (Pkm2)
pdb|4B2D|A Chain A, Human Pkm2 With L-serine And Fbp Bound.
pdb|4B2D|B Chain B, Human Pkm2 With L-serine And Fbp Bound.
pdb|4B2D|C Chain C, Human Pkm2 With L-serine And Fbp Bound
Length = 548
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEH---------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 31 QTQQLHAAMADTFLEHMCRLDIDSPPITARNT--GIICTIGPASRSVETLKEMIKSGMNV 88
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 89 ARLNFSHGTHEY 100
>pdb|3U2Z|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3U2Z|B Chain B, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3U2Z|C Chain C, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3U2Z|D Chain D, Activator-Bound Structure Of Human Pyruvate Kinase M2
Length = 533
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEH---------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 16 QTQQLHAAMADTFLEHMCRLDIDSPPITARNT--GIICTIGPASRSVETLKEMIKSGMNV 73
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 74 ARLNFSHGTHEY 85
>pdb|3BJT|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJT|B Chain B, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJT|C Chain C, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJT|D Chain D, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
Length = 530
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEH---------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 13 QTQQLHAAMADTFLEHMCRLDIDSPPITARNT--GIICTIGPASRSVETLKEMIKSGMNV 70
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 71 ARLNFSHGTHEY 82
>pdb|1T5A|A Chain A, Human Pyruvate Kinase M2
pdb|1T5A|B Chain B, Human Pyruvate Kinase M2
pdb|1T5A|C Chain C, Human Pyruvate Kinase M2
pdb|1T5A|D Chain D, Human Pyruvate Kinase M2
Length = 567
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEH---------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 50 QTQQLHAAMADTFLEHMCRLDIDSPPITARNT--GIICTIGPASRSVETLKEMIKSGMNV 107
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 108 ARLNFSHGTHEY 119
>pdb|3SRF|C Chain C, Human M1 Pyruvate Kinase
pdb|3SRF|A Chain A, Human M1 Pyruvate Kinase
pdb|3SRF|B Chain B, Human M1 Pyruvate Kinase
pdb|3SRF|D Chain D, Human M1 Pyruvate Kinase
pdb|3SRF|E Chain E, Human M1 Pyruvate Kinase
pdb|3SRF|F Chain F, Human M1 Pyruvate Kinase
pdb|3SRF|G Chain G, Human M1 Pyruvate Kinase
pdb|3SRF|H Chain H, Human M1 Pyruvate Kinase
Length = 551
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEH---------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 34 QTQQLHAAMADTFLEHMCRLDIDSPPITARNT--GIICTIGPASRSVETLKEMIKSGMNV 91
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 92 ARLNFSHGTHEY 103
>pdb|3N25|A Chain A, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|B Chain B, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|C Chain C, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|D Chain D, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|E Chain E, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|F Chain F, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|G Chain G, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|H Chain H, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
Length = 531
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEHD---------VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 14 QTQQLHAAMADTFLEHKCRLDIDSAPITARNT--GIICTIGPASRSVETLKEMIKSGMNV 71
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 72 ARMNFSHGTHEY 83
>pdb|2G50|A Chain A, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|B Chain B, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|C Chain C, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|D Chain D, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|E Chain E, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|F Chain F, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|G Chain G, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|H Chain H, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase
Length = 530
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEHD---------VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 13 QTQQLHAAMADTFLEHKCRLDIDSAPITARNT--GIICTIGPASRSVETLKEMIKSGMNV 70
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 71 ARMNFSHGTHEY 82
>pdb|1F3X|A Chain A, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|B Chain B, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|C Chain C, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|D Chain D, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|E Chain E, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|F Chain F, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|G Chain G, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|H Chain H, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
Length = 530
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEH---------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 13 QTQQLHAAMADTFLEHMCRLDIDSAPITARNT--GIICTIGPASRSVETLKEMIKSGMNV 70
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 71 ARMNFSHGTHEY 82
>pdb|1F3W|A Chain A, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|B Chain B, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|C Chain C, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|D Chain D, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|E Chain E, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|F Chain F, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|G Chain G, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|H Chain H, Recombinant Rabbit Muscle Pyruvate Kinase
Length = 530
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEH---------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 13 QTQQLHAAMADTFLEHMCRLDIDSAPITARNT--GIICTIGPASRSVETLKEMIKSGMNV 70
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 71 ARMNFSHGTHEY 82
>pdb|1AQF|A Chain A, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|B Chain B, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|C Chain C, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|D Chain D, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|E Chain E, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|F Chain F, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|G Chain G, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|H Chain H, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1A5U|A Chain A, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|B Chain B, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|C Chain C, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|D Chain D, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|E Chain E, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|F Chain F, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|G Chain G, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|H Chain H, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A49|A Chain A, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|B Chain B, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|C Chain C, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|D Chain D, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|E Chain E, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|F Chain F, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|G Chain G, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|H Chain H, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
Length = 530
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEH---------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 13 QTQQLHAAMADTFLEHMCRLDIDSAPITARNT--GIICTIGPASRSVETLKEMIKSGMNV 70
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 71 ARMNFSHGTHEY 82
>pdb|1PKN|A Chain A, Structure Of Rabbit Muscle Pyruvate Kinase Complexed With
Mn2+, K+, And Pyruvate
Length = 530
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 300 EAEKLWEEMRDKNVEH---------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++L M D +EH + A NT G C IG +R+ E +EM SG+
Sbjct: 13 QTQQLHAAMADTFLEHMCRLDIDSAPITARNT--GIICTIGPASRSVETLKEMIKSGMNV 70
Query: 351 SSVTFEHLVNGY 362
+ + F H + Y
Sbjct: 71 ARMNFSHGTHEY 82
>pdb|4G24|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
A. Thaliana With Mn
pdb|4G26|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
A. Thaliana With Ca
Length = 501
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 27/150 (18%)
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
EA +L++E R V+ YN ++ C + E A ESS
Sbjct: 44 EALRLYDEARRNGVQLSQYHYNVLLY-VCSLAEAA-------------TESSPNP----- 84
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
G R D+ ++V + + G+ + V D F+ + +KA FG+
Sbjct: 85 -GLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKD---DPEMAFDMVKQMKA----FGI 136
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
P +SY + G C +G ++A +V A M
Sbjct: 137 QPRLRSYGPALFGFCRKGDADKAYEVDAHM 166
>pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain
As A Framework For Inhibitor Design.
pdb|3HHD|B Chain B, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain
As A Framework For Inhibitor Design.
pdb|3HHD|C Chain C, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain
As A Framework For Inhibitor Design.
pdb|3HHD|D Chain D, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain
As A Framework For Inhibitor Design
Length = 965
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
I+GG + + + +F R +G+ E + F+ NGYCR+ V + +L + R+
Sbjct: 185 AIVGGINVLLKPNTSVQFLR-LGMLSPEGTCKAFDTAGNGYCRSEGVVAVLLTKKSLARR 243
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,539,530
Number of Sequences: 62578
Number of extensions: 533160
Number of successful extensions: 1159
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1155
Number of HSP's gapped (non-prelim): 26
length of query: 494
length of database: 14,973,337
effective HSP length: 103
effective length of query: 391
effective length of database: 8,527,803
effective search space: 3334370973
effective search space used: 3334370973
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)