BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011076
(494 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255553241|ref|XP_002517663.1| signal recognition particle 54 kD protein, putative [Ricinus
communis]
gi|223543295|gb|EEF44827.1| signal recognition particle 54 kD protein, putative [Ricinus
communis]
Length = 497
Score = 989 bits (2556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/494 (96%), Positives = 485/494 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRAIQQMSNATIIDEK LN+CLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKR+IIQQAIFNELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAIFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS+EL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM E
Sbjct: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMFE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP MLKQIGG+GGLQNLMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQM 480
Query: 481 GSTKDMMGMFGGGE 494
GS KDMMGMFGGGE
Sbjct: 481 GSAKDMMGMFGGGE 494
>gi|225442910|ref|XP_002264159.1| PREDICTED: signal recognition particle 54 kDa protein 2 [Vitis
vinifera]
Length = 495
Score = 975 bits (2520), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/494 (93%), Positives = 485/494 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL++LGGSISRA+QQMSNATIIDEKVLNECLNEITRALLQ+DVQFKLVR+MQTNIKK+V
Sbjct: 1 MVLSELGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKLV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DDLAAGHNKR+IIQQAIF ELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NFDDLAAGHNKRKIIQQAIFQELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAF+QSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATRPDLVIFVMDSSIGQAAFDQAQAFRQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS+EL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKGREKESQAKIKRYMTMMDSMTNEELD+SNPKLMN+SRIMRIARGSGRQVREVMEMLE
Sbjct: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDTSNPKLMNESRIMRIARGSGRQVREVMEMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK++PQ MLKQIGG+G LQNLMKQ+
Sbjct: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKIIPQQMLKQIGGMGALQNLMKQV 480
Query: 481 GSTKDMMGMFGGGE 494
G+ KDM+GMFGGG+
Sbjct: 481 GNNKDMLGMFGGGD 494
>gi|356526231|ref|XP_003531722.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
isoform 1 [Glycine max]
Length = 495
Score = 969 bits (2505), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/494 (93%), Positives = 484/494 (97%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNATIIDEKVLN+CLN+ITRALLQ+DVQFKLVR+MQTNIK IV
Sbjct: 1 MVLAELGGSISRALQQMSNATIIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKSIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQA+FNELCK+LDPGKPSFT KKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTLKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 QENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPI QVFSMLPGFS+EL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPISQVFSMLPGFSAEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKL+N+SR+MRIARGSGR VREVMEMLE
Sbjct: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLINESRMMRIARGSGRPVREVMEMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP MLKQIGG+GGLQ+LMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
Query: 481 GSTKDMMGMFGGGE 494
GS KDMMGMFGGG+
Sbjct: 481 GSAKDMMGMFGGGD 494
>gi|224059270|ref|XP_002299799.1| predicted protein [Populus trichocarpa]
gi|222847057|gb|EEE84604.1| predicted protein [Populus trichocarpa]
Length = 493
Score = 969 bits (2504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/493 (93%), Positives = 482/493 (97%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRAIQQMSNATIIDEK LN+CLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQAIFNELCK+LDPGK SFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAIFNELCKILDPGKSSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IA EGVETFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAEEGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDL+IFVMDSSIGQAAFDQAQAFKQ V
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLIIFVMDSSIGQAAFDQAQAFKQMV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQN+LKMGPIGQVFSMLPGFS+EL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPIGQVFSMLPGFSAEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG EKESQAKIKRYMTMMDSMTNEELDSSNPKL+NDSR+MRIARG+GR +R+VME+LE
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKLLNDSRMMRIARGAGRPIRDVMEILE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAK+WSKMKGLKIPKKGEMS+LSRNMNAQHMSKVLP MLKQIGG+GGLQNLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSSLSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQM 480
Query: 481 GSTKDMMGMFGGG 493
GS KDMMGMFGGG
Sbjct: 481 GSAKDMMGMFGGG 493
>gi|350535032|ref|NP_001234428.1| signal recognition particle 54 kDa protein 2 [Solanum lycopersicum]
gi|1711512|sp|P49972.1|SR542_SOLLC RecName: Full=Signal recognition particle 54 kDa protein 2;
Short=SRP54
gi|556902|emb|CAA84288.1| 54-kD signal recognition particle (SRP) specific protein [Solanum
lycopersicum]
Length = 499
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/485 (95%), Positives = 477/485 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNATIIDEKVLNECLNEITRALLQADVQFKLVR+M TNIKKIV
Sbjct: 1 MVLAELGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMTTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQA+FNELCK+LDPGKPSFTPKKGKPS++MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKPSIVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAV+GVETFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVDGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMYEQFQNILKMGPIGQVFSMLPGFS+EL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKGRE ESQAKIKRYMTMMDSMTNEELDSSNPKLM DSRIMRIARGSGRQV EVM+M+E
Sbjct: 361 MPKGRENESQAKIKRYMTMMDSMTNEELDSSNPKLMTDSRIMRIARGSGRQVHEVMDMME 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP MLKQIGG+GGLQNLMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQM 480
Query: 481 GSTKD 485
GS KD
Sbjct: 481 GSAKD 485
>gi|224139052|ref|XP_002322968.1| predicted protein [Populus trichocarpa]
gi|222867598|gb|EEF04729.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/493 (94%), Positives = 480/493 (97%), Gaps = 2/493 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRAIQQMSNATIIDEK LN+CLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAELGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKR+IIQQAIFNELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAIFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQE ALFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEVALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQN+LKMGPIGQVFSMLPGFSSEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPIGQVFSMLPGFSSEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKGREKESQAKIKRYMTMMDSMTNE +SNPKLMN+SRIMRIARGSGR VR+VMEMLE
Sbjct: 361 MPKGREKESQAKIKRYMTMMDSMTNE--GNSNPKLMNESRIMRIARGSGRSVRDVMEMLE 418
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP MLKQIGG+GGLQNLMKQM
Sbjct: 419 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQM 478
Query: 481 GSTKDMMGMFGGG 493
GS KDMMGMFGGG
Sbjct: 479 GSAKDMMGMFGGG 491
>gi|118487996|gb|ABK95819.1| unknown [Populus trichocarpa]
Length = 495
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/494 (93%), Positives = 481/494 (97%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRAIQQMSNATIIDEK LN+CLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQAIFNELCK+LDPGK SFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAIFNELCKILDPGKSSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IA EGVETFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAEEGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAAL EEMRQVSEAT PDL+IFVMDSSIGQA FDQAQAFKQ V
Sbjct: 181 KENCDLIIVDTSGRHKQEAALLEEMRQVSEATKPDLIIFVMDSSIGQAPFDQAQAFKQMV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQN+LKMGPIGQVFSMLPGFS+EL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPIGQVFSMLPGFSAEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG EKESQAKIKRYMTMMDSMTNEELDSSNPKL+NDSR+MRIARG+GR +R+VMEMLE
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKLLNDSRMMRIARGAGRPIRDVMEMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAK+WSKMKGLKIPKKGEMS+LSRNMNAQHMSKVLP MLKQIGG+GGLQNLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSSLSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQM 480
Query: 481 GSTKDMMGMFGGGE 494
GS KDMMGMFGGG+
Sbjct: 481 GSAKDMMGMFGGGD 494
>gi|449468938|ref|XP_004152178.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Cucumis sativus]
Length = 495
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/494 (92%), Positives = 485/494 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+QQMS+AT+IDEKVLNECLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKR+IIQQA+FNELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE+CDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY+QFQN+LKMGPI QVFSMLPG+S++L
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKGREKESQAK+KRYMTMMDSMT+EELDS+NPKL+N+SR+MRIARGSG +V+EVMEM+E
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAK+WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP +LKQIGG+GGLQ+LMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
Query: 481 GSTKDMMGMFGGGE 494
GS KDMMGMFGGG+
Sbjct: 481 GSNKDMMGMFGGGD 494
>gi|356554903|ref|XP_003545781.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Glycine max]
Length = 499
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/485 (94%), Positives = 475/485 (97%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNAT+IDEKVLN+CLN ITRALLQ+DVQFKLVR++QTNIK IV
Sbjct: 1 MVLAELGGSISRALQQMSNATVIDEKVLNDCLNVITRALLQSDVQFKLVRDLQTNIKNIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQA+FNELCK+LDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFMDKI EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS+EL
Sbjct: 301 SGFMDKIQEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN+SR+MRIARG+GRQ+REVMEMLE
Sbjct: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGAGRQIREVMEMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKIWSKMKGLKIPKKG+MSALSRNMNAQHMSKVLP MLKQIGG+GGLQNLMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKKGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQM 480
Query: 481 GSTKD 485
GS KD
Sbjct: 481 GSAKD 485
>gi|356550626|ref|XP_003543686.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Glycine max]
Length = 500
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/485 (93%), Positives = 475/485 (97%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+Q MSNAT+IDEKVLN+CLN+ITRALLQ+DVQFKLVR+MQTNIK IV
Sbjct: 1 MVLAELGGSISRALQLMSNATVIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKNIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQA+FNELCK+LDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEA+LFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPI QVFSMLPGFS+EL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPISQVFSMLPGFSAEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN+SR+MRIARG+GRQ+REVMEMLE
Sbjct: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGAGRQIREVMEMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKIWSKMKGLKIPKKG+MSALSRNMNAQHMSKVLP MLKQIGG+GGLQNLMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKKGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQM 480
Query: 481 GSTKD 485
GS KD
Sbjct: 481 GSAKD 485
>gi|356519296|ref|XP_003528309.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Glycine max]
Length = 495
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/485 (93%), Positives = 475/485 (97%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNATIIDEKVLN+CLN+ITRALLQ+DVQFKLVR+MQTNIK IV
Sbjct: 1 MVLAELGGSISRALQQMSNATIIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKNIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRIIQQA+FNELCK+LDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 QENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQN+LKMGPI QVFSMLPGFS+EL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN+SR+MRIARGSGR VREVMEMLE
Sbjct: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGSGRPVREVMEMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP MLKQIGG+GGLQ+LMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
Query: 481 GSTKD 485
GS KD
Sbjct: 481 GSAKD 485
>gi|18402407|ref|NP_564535.1| signal recognition particle subunit SRP54 [Arabidopsis thaliana]
gi|21542461|sp|P49967.2|SR543_ARATH RecName: Full=Signal recognition particle 54 kDa protein 3;
Short=SRP54
gi|17386102|gb|AAL38597.1|AF446864_1 At1g48900/F27K7_8 [Arabidopsis thaliana]
gi|15450461|gb|AAK96524.1| At1g48900/F27K7_8 [Arabidopsis thaliana]
gi|15810010|gb|AAL06932.1| At1g48900/F27K7_8 [Arabidopsis thaliana]
gi|332194242|gb|AEE32363.1| signal recognition particle subunit SRP54 [Arabidopsis thaliana]
Length = 495
Score = 928 bits (2398), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/494 (88%), Positives = 474/494 (95%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+TFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEA+LFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMY+QFQNIL MGP+ +VFSMLPG S+E+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG EKESQAKIKRYMTMMDSMTN+ELDSSNPK+ N+SR+MRIARGSGRQVREVMEMLE
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKIWSKMKGLKIPK G+MSALSRNMNAQHMSKVLP MLKQIGG+GGLQ+LMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
Query: 481 GSTKDMMGMFGGGE 494
GS KDMMGMFGGG+
Sbjct: 481 GSGKDMMGMFGGGD 494
>gi|356526233|ref|XP_003531723.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
isoform 2 [Glycine max]
Length = 500
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/504 (89%), Positives = 473/504 (93%), Gaps = 15/504 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNATIIDEKVLN+CLN+ITRALLQ+DVQFKLVR+MQTNIK IV
Sbjct: 1 MVLAELGGSISRALQQMSNATIIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKSIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGS-------- 112
NLDDLAAGHNKRRIIQQA+FNELCK+LDPGKPSFT KKGKPSV+MFVGLQGS
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTLKKGKPSVVMFVGLQGSYYNVMRFC 120
Query: 113 --GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
G C + KKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+
Sbjct: 121 ANGMMIECLCF-----KKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVK 175
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAF 230
IAVEGVE FK+ENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAF
Sbjct: 176 IAVEGVERFKQENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAF 235
Query: 231 DQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 290
DQAQAFKQSV+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF
Sbjct: 236 DQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 295
Query: 291 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVF 350
VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPI QVF
Sbjct: 296 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPISQVF 355
Query: 351 SMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 410
SMLPGFS+ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKL+N+SR+MRIARGSGR
Sbjct: 356 SMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLINESRMMRIARGSGR 415
Query: 411 QVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGV 470
VREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP MLKQIGG+
Sbjct: 416 PVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGM 475
Query: 471 GGLQNLMKQMGSTKDMMGMFGGGE 494
GGLQ+LMKQMGS KDMMGMFGGG+
Sbjct: 476 GGLQSLMKQMGSAKDMMGMFGGGD 499
>gi|515681|gb|AAA66200.1| signal recognition particle 54 kDa subunit [Arabidopsis thaliana]
Length = 495
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/494 (88%), Positives = 473/494 (95%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGGITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKRKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+TFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEA+LFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMY+QFQNIL MGP+ +VFSMLPG S+E+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG EKESQAKIKRYMTMMDSMTN+ELDSS PK+ N+SR+MRIARGSGRQVREVMEMLE
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNDELDSSGPKVFNESRMMRIARGSGRQVREVMEMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKIWSKMKGLKIPK G+MSALSRNMNAQHMSKVLP MLKQIGG+GGLQ+LMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
Query: 481 GSTKDMMGMFGGGE 494
GS KDMMGMFGGG+
Sbjct: 481 GSGKDMMGMFGGGD 494
>gi|357468165|ref|XP_003604367.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
gi|355505422|gb|AES86564.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
Length = 496
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/485 (89%), Positives = 468/485 (96%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LGGSI+RA++QMSNATIIDEKVLNECLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLADLGGSITRALKQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQA+FNELC +LDPGKP+FTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCNILDPGKPAFTPKKGKASVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG GD
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGQGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFM+KIHEVVPMDQQPELL KL EG FTLRIMYEQFQNILKMGP+ +VFSMLPGFS+EL
Sbjct: 301 SGFMNKIHEVVPMDQQPELLNKLQEGTFTLRIMYEQFQNILKMGPMSEVFSMLPGFSNEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+PKG++++SQAKIKRYMTMMDSMTNEELDSSNPKLMN+SR+MRIARGSGRQVREVMEM+E
Sbjct: 361 LPKGKDQDSQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGSGRQVREVMEMME 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKIWSKMKGLKIPKKG+M++++RNMNA HMSK+LP MLKQIGG+GGLQ+LMK M
Sbjct: 421 EYKRLAKIWSKMKGLKIPKKGDMNSMTRNMNATHMSKILPPQMLKQIGGMGGLQSLMKSM 480
Query: 481 GSTKD 485
GS KD
Sbjct: 481 GSNKD 485
>gi|297852530|ref|XP_002894146.1| signal recognition particle 54 kDa protein 3 [Arabidopsis lyrata
subsp. lyrata]
gi|297852532|ref|XP_002894147.1| signal recognition particle 54 kDa protein 3 [Arabidopsis lyrata
subsp. lyrata]
gi|297339988|gb|EFH70405.1| signal recognition particle 54 kDa protein 3 [Arabidopsis lyrata
subsp. lyrata]
gi|297339989|gb|EFH70406.1| signal recognition particle 54 kDa protein 3 [Arabidopsis lyrata
subsp. lyrata]
Length = 496
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/495 (88%), Positives = 472/495 (95%), Gaps = 1/495 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+TFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEA LFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMY+ FQNIL MGP+ +VFSMLPG S+E+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDLFQNILNMGPLKEVFSMLPGISAEM 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG EKESQAKIKRYMTMMDSMTN+ELDSSNPK+ N+SR+MRIARGSGRQVREVMEMLE
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLE 420
Query: 421 EYKR-LAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 479
EYKR LAKIWSKMKGLKIPK G+MSALSRNMNAQHMSKVLP MLKQIGG+GGLQ+LMKQ
Sbjct: 421 EYKRLLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQ 480
Query: 480 MGSTKDMMGMFGGGE 494
MGS KDMMGMFGGG+
Sbjct: 481 MGSGKDMMGMFGGGD 495
>gi|226496107|ref|NP_001142208.1| uncharacterized protein LOC100274376 [Zea mays]
gi|194702286|gb|ACF85227.1| unknown [Zea mays]
gi|194707600|gb|ACF87884.1| unknown [Zea mays]
gi|413952289|gb|AFW84938.1| hypothetical protein ZEAMMB73_989437 [Zea mays]
Length = 496
Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/482 (90%), Positives = 464/482 (96%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVLNECLNEI+RALLQADVQFK+VR+MQ NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLNECLNEISRALLQADVQFKMVRDMQANIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRI+QQA+F ELC MLDPGKPSFTPKKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEALAAGTNKRRIMQQAVFTELCTMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+GFMDKIHEVVP DQQPELLQKLSEG+FTLR+MYEQFQNILKMGPIGQVFSMLPGFS+EL
Sbjct: 301 AGFMDKIHEVVPTDQQPELLQKLSEGSFTLRLMYEQFQNILKMGPIGQVFSMLPGFSAEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG EKESQAKIKRYMTMMDSMT+ ELDS+NPKLM +SRI+RIARGSGR VR+V++MLE
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTDAELDSTNPKLMTESRIIRIARGSGRPVRDVIDMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKIW KMKGLKIPKKGEMSALSRNMN QHMSKVLP MLKQIGG+GGLQ+LMKQM
Sbjct: 421 EYKRLAKIWGKMKGLKIPKKGEMSALSRNMNVQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
Query: 481 GS 482
GS
Sbjct: 481 GS 482
>gi|242054557|ref|XP_002456424.1| hypothetical protein SORBIDRAFT_03g036030 [Sorghum bicolor]
gi|241928399|gb|EES01544.1| hypothetical protein SORBIDRAFT_03g036030 [Sorghum bicolor]
Length = 496
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/482 (90%), Positives = 463/482 (96%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVLN+CLNEI+RALLQADVQFK+VR+MQ NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLNDCLNEISRALLQADVQFKMVRDMQANIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRI+QQA+F ELC MLDPGKPSFTPKKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEALAAGTNKRRIMQQAVFTELCNMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFMDKIHEVVP DQQPELLQKLSEG+FTLR+MYEQFQNILKMGPIGQVFSMLPGFS+EL
Sbjct: 301 SGFMDKIHEVVPTDQQPELLQKLSEGSFTLRLMYEQFQNILKMGPIGQVFSMLPGFSAEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG EKESQAKIKRYMTMMDSMT ELDS+NPKLM +SRI+RIARGSGR VR+VM+MLE
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTEAELDSTNPKLMTESRIIRIARGSGRPVRDVMDMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKIW KMKGLKIPKKGEMSALSRNMN QHMSKVLP MLKQIGG+GGLQ+LMKQM
Sbjct: 421 EYKRLAKIWGKMKGLKIPKKGEMSALSRNMNVQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
Query: 481 GS 482
GS
Sbjct: 481 GS 482
>gi|115440231|ref|NP_001044395.1| Os01g0772800 [Oryza sativa Japonica Group]
gi|20160917|dbj|BAB89854.1| putative signal recognition particle 54kD protein [Oryza sativa
Japonica Group]
gi|21743252|dbj|BAC03250.1| putative signal recognition particle 54kD protein [Oryza sativa
Japonica Group]
gi|32879776|dbj|BAC79360.1| signal recognition particle 54kDa subunit [Oryza sativa Japonica
Group]
gi|113533926|dbj|BAF06309.1| Os01g0772800 [Oryza sativa Japonica Group]
gi|215767979|dbj|BAH00208.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619331|gb|EEE55463.1| hypothetical protein OsJ_03626 [Oryza sativa Japonica Group]
Length = 496
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/482 (90%), Positives = 464/482 (96%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVL++CLNEI+RALLQ+DVQFK+VR+MQ+NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLSDCLNEISRALLQSDVQFKMVRDMQSNIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRIIQQA+F ELC MLDPGKPSFTPKKGKP V+MFVGLQGSGKTTTCTK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPSFTPKKGKPCVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFMDKIHEVVP DQQPELLQKLSEG FTLR+MYEQFQNILKMGPIGQVFSMLPGFSSEL
Sbjct: 301 SGFMDKIHEVVPTDQQPELLQKLSEGTFTLRLMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG EKESQAKIKRYMTMMDSMT+ ELDS+NPKLM +SRI+RIARGSGR VR+V++MLE
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTDGELDSTNPKLMTESRILRIARGSGRPVRDVVDMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKIWSKMKGLKIPKKGEMSALSRNMN QHMSKVLP MLKQIGG+GGLQ+LMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNVQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
Query: 481 GS 482
GS
Sbjct: 481 GS 482
>gi|218189132|gb|EEC71559.1| hypothetical protein OsI_03915 [Oryza sativa Indica Group]
Length = 496
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/482 (90%), Positives = 463/482 (96%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVL++CLNEI+RALLQ+DVQFK+VR+MQ+NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLSDCLNEISRALLQSDVQFKMVRDMQSNIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRIIQQA+F ELC MLDPGKPSFTPKKGKP V+MFVGLQGSGKTTTCTK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPSFTPKKGKPCVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGE +DEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGERIDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFMDKIHEVVP DQQPELLQKLSEG FTLR+MYEQFQNILKMGPIGQVFSMLPGFSSEL
Sbjct: 301 SGFMDKIHEVVPTDQQPELLQKLSEGTFTLRLMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG EKESQAKIKRYMTMMDSMT+ ELDS+NPKLM +SRI+RIARGSGR VR+V++MLE
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTDGELDSTNPKLMTESRILRIARGSGRPVRDVVDMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKIWSKMKGLKIPKKGEMSALSRNMN QHMSKVLP MLKQIGG+GGLQ+LMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNVQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
Query: 481 GS 482
GS
Sbjct: 481 GS 482
>gi|11094805|gb|AAG29734.1|AC084414_2 signal recognition particle 54 kDa protein 2 (SRP54), putative
[Arabidopsis thaliana]
Length = 522
Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/521 (84%), Positives = 473/521 (90%), Gaps = 27/521 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG------------------- 161
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYG
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGRFGLGQYLHISGLKRTSVT 180
Query: 162 --------SYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATN 213
YTESDPV+IAVEGV+TFKKENCDLIIVDTSGRHKQEA+LFEEMRQV+EAT
Sbjct: 181 YMFLCPIIHYTESDPVKIAVEGVDTFKKENCDLIIVDTSGRHKQEASLFEEMRQVAEATK 240
Query: 214 PDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFI 273
PDLVIFVMDSSIGQAAFDQAQAFKQSV+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFI
Sbjct: 241 PDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFI 300
Query: 274 GTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
GTGEHMDEFEVFDVKPFVSRLLGMGDWSGF+DK+ EVVP DQQPELL+KLS+GNFTLRIM
Sbjct: 301 GTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIM 360
Query: 334 YEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNP 393
Y+QFQNIL MGP+ +VFSMLPG S+E+MPKG EKESQAKIKRYMTMMDSMTN+ELDSSNP
Sbjct: 361 YDQFQNILNMGPLKEVFSMLPGISAEMMPKGHEKESQAKIKRYMTMMDSMTNDELDSSNP 420
Query: 394 KLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQ 453
K+ N+SR+MRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPK G+MSALSRNMNAQ
Sbjct: 421 KVFNESRMMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQ 480
Query: 454 HMSKVLPQGMLKQIGGVGGLQNLMKQMGSTKDMMGMFGGGE 494
HMSKVLP MLKQIGG+GGLQ+LMKQMGS KDMMGMFGGG+
Sbjct: 481 HMSKVLPPQMLKQIGGMGGLQSLMKQMGSGKDMMGMFGGGD 521
>gi|1711509|sp|P49971.1|SR541_SOLLC RecName: Full=Signal recognition particle 54 kDa protein 1;
Short=SRP54
gi|556900|emb|CAA84275.1| 54-kD signal recognition particle (SRP) specific protein [Solanum
lycopersicum]
Length = 496
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/486 (89%), Positives = 469/486 (96%), Gaps = 2/486 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+QQMSNATIIDEKVLNECLNEITRALLQADVQFKLVR+M TNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMSTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRIIQQA++NELCK+LDPGKP+FT KKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIQQAVYNELCKILDPGKPAFTLKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGS-YTESDPVRIAVEGVETF 179
YAY+HQK+GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGS YTESDPV+IAV+GVETF
Sbjct: 121 YAYHHQKRGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSSYTESDPVKIAVDGVETF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KKENCDLIIVDTSGRHKQEAALFEEMRQVSEA PDLVIFVMDSSIGQAAFDQAQAF+QS
Sbjct: 181 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEAQKPDLVIFVMDSSIGQAAFDQAQAFRQS 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V+VGAVIVTKMDGHAKGGGALS VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 241 VAVGAVIVTKMDGHAKGGGALSRVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
SG ++KI +VVPMDQQPELLQKLSEG+FTLRIMYEQFQ++LKMGP+G VFSMLPGFS+E
Sbjct: 301 LSGLVNKIQDVVPMDQQPELLQKLSEGHFTLRIMYEQFQSMLKMGPLG-VFSMLPGFSAE 359
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
+MP+GREKESQAK KRYMTMMDSMT+EELDS+NPK++ +SRIMRIARGSGR V EVMEML
Sbjct: 360 MMPQGREKESQAKFKRYMTMMDSMTDEELDSTNPKILTESRIMRIARGSGRLVHEVMEML 419
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 479
EEYKRLAKI+SKMKGLKIPKKG+MS+LSRNMNAQ+MSKVLP MLKQIGG+GGLQNLMKQ
Sbjct: 420 EEYKRLAKIFSKMKGLKIPKKGDMSSLSRNMNAQNMSKVLPPQMLKQIGGMGGLQNLMKQ 479
Query: 480 MGSTKD 485
MGS KD
Sbjct: 480 MGSAKD 485
>gi|308080100|ref|NP_001183903.1| uncharacterized protein LOC100502496 [Zea mays]
gi|238015356|gb|ACR38713.1| unknown [Zea mays]
gi|414880280|tpg|DAA57411.1| TPA: hypothetical protein ZEAMMB73_937725 [Zea mays]
Length = 494
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/482 (88%), Positives = 461/482 (95%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVLN+CLNEI+RALLQADVQFK+VR+MQ NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLNDCLNEISRALLQADVQFKMVRDMQANIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRI+QQA+F ELC MLDPGKPSFTPKKGKPSV+MFVGLQGSGKTTTC+K
Sbjct: 61 NLEALAAGTNKRRIMQQAVFTELCNMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEH+D+FEVFDVKPFVSRLLGMGDW
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFMDKIHEV+P DQQP+LLQKLSEG+F+LR+MYEQFQN+LKMGPIGQVFSMLPGFS+EL
Sbjct: 301 SGFMDKIHEVIPTDQQPDLLQKLSEGSFSLRLMYEQFQNLLKMGPIGQVFSMLPGFSAEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG EKESQAKIKRYMTMMDSMT+ ELDS+NPKLM +SRI+RIARGSGR VR+VM+MLE
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTDAELDSTNPKLMTESRIIRIARGSGRPVRDVMDMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKIW KMKGLK+ KKG+MSAL+RNMN Q MSK LP MLKQIGG+GGLQ+LMKQM
Sbjct: 421 EYKRLAKIWGKMKGLKLQKKGDMSALTRNMNVQQMSKALPPQMLKQIGGMGGLQSLMKQM 480
Query: 481 GS 482
GS
Sbjct: 481 GS 482
>gi|357133062|ref|XP_003568147.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Brachypodium distachyon]
Length = 498
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/491 (83%), Positives = 454/491 (92%), Gaps = 1/491 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+QQMSNAT+IDEKVL ECLNEI+RALLQ+DVQFK+VR+MQ NI+KIV
Sbjct: 1 MVLAQLGGSISRALQQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQANIRKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRIIQQA+FNELC MLDPGKP+F PKKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEALAAGTNKRRIIQQAVFNELCNMLDPGKPAFIPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEG+E F+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN DLII+DTSGRHKQEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKPFV RLLGMGD
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKPFVKRLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SG MDKI +V+P DQ PELLQKL+EG FTLR++YEQFQN+LKMGPIGQVFSMLPGFSSEL
Sbjct: 301 SGLMDKIQDVMPADQHPELLQKLTEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG EKE QAKIKRYMT+MDSMTN ELDS+NPKLM +SRI+RIARGSGRQ+R+VM+MLE
Sbjct: 361 MPKGHEKEGQAKIKRYMTIMDSMTNAELDSTNPKLMTESRIVRIARGSGRQIRDVMDMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAK+WSKMKGLK+PK G+MS LS+N+N Q + K LP +LKQ+GG+GGLQ LMKQM
Sbjct: 421 EYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNMQQIQKALPPQVLKQMGGLGGLQALMKQM 480
Query: 481 GSTKDMMGMFG 491
G KDM M G
Sbjct: 481 GG-KDMSKMLG 490
>gi|302811179|ref|XP_002987279.1| hypothetical protein SELMODRAFT_158663 [Selaginella moellendorffii]
gi|302815043|ref|XP_002989204.1| hypothetical protein SELMODRAFT_272046 [Selaginella moellendorffii]
gi|300143104|gb|EFJ09798.1| hypothetical protein SELMODRAFT_272046 [Selaginella moellendorffii]
gi|300144914|gb|EFJ11594.1| hypothetical protein SELMODRAFT_158663 [Selaginella moellendorffii]
Length = 491
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/489 (83%), Positives = 455/489 (93%), Gaps = 3/489 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG ISRA+Q+M+NAT+IDEKVL CLNEI+RAL QADVQ K+V+ M TNIKKIV
Sbjct: 1 MVLAELGGRISRALQEMTNATVIDEKVLTACLNEISRALFQADVQLKMVQTMCTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRIIQQA+FNELC MLDPGKPSF+P+KGKPSVIMFVGLQGSGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIQQAVFNELCSMLDPGKPSFSPQKGKPSVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAY++QKKG+KPAL+CADTFRAGAFDQLKQNATKA IPFYGSYTE+DPV+IA EG+ETF+
Sbjct: 121 YAYHYQKKGFKPALICADTFRAGAFDQLKQNATKANIPFYGSYTETDPVKIAQEGLETFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E CDLIIVDTSGRHKQEAALFEEMRQV+ AT+PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 AEKCDLIIVDTSGRHKQEAALFEEMRQVAAATSPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE F+ KPFVSRLLGMGDW
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFETFETKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+GFMD+I EVVPMDQQPEL+QKL++GNFTLR+MYEQFQNI+ MGP+ QV SM+PGFSSEL
Sbjct: 301 AGFMDRIQEVVPMDQQPELIQKLTDGNFTLRLMYEQFQNIMSMGPLNQVMSMIPGFSSEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
MPKGREKESQAKIK++MTMMDSMT+ ELDS+NPKL + SR+MR+ARGSGR VR+V EML
Sbjct: 361 MPKGREKESQAKIKKFMTMMDSMTSAELDSTNPKLFAEASRVMRVARGSGRSVRDVTEML 420
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 479
EEYKRLAK+WSKMKGLKIPKKG+MSA++RNMNAQHMSKVLP MLKQ+GG+GGLQNLMKQ
Sbjct: 421 EEYKRLAKLWSKMKGLKIPKKGDMSAMARNMNAQHMSKVLPPQMLKQMGGLGGLQNLMKQ 480
Query: 480 M--GSTKDM 486
G KDM
Sbjct: 481 FGGGGPKDM 489
>gi|1711511|sp|P49969.1|SR542_HORVU RecName: Full=Signal recognition particle 54 kDa protein 2;
Short=SRP54
gi|1020002|gb|AAA79355.1| signal recognition particle 54 kDa subunit [Hordeum vulgare]
gi|326510077|dbj|BAJ87255.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/486 (83%), Positives = 452/486 (93%), Gaps = 1/486 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVL ECLNEI+RALLQ+DVQFK+VR+MQTNI+KIV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRIIQQA+F ELC MLDPGKP+FTPKKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEG+E F+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN DLII+DTSGRHKQEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKPFVSRLLGMGD
Sbjct: 241 SVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SG MDKI +V+P DQQPELL KL+EG FTLR++YEQFQN+LKMGPIGQVFSMLPGFSSEL
Sbjct: 301 SGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG EKE QAKIKRYMT+MDSMT ELDS+NPKLM +SRI+RIARGSGRQ+R+V +MLE
Sbjct: 361 MPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTESRIIRIARGSGRQIRDVTDMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAK+WSKMKGLK+PK G+MS LS+N+N Q M+K LP +LKQ+GG+GGLQ LMKQM
Sbjct: 421 EYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGGMGGLQALMKQM 480
Query: 481 GSTKDM 486
G KDM
Sbjct: 481 GG-KDM 485
>gi|1711508|sp|P49968.1|SR541_HORVU RecName: Full=Signal recognition particle 54 kDa protein 1;
Short=SRP54
gi|1020000|gb|AAA79354.1| signal recognition particle 54 kDa subunit [Hordeum vulgare]
Length = 497
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/486 (83%), Positives = 451/486 (92%), Gaps = 1/486 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVL ECLNEI+RALLQ+DVQFK+VR+MQTNI+KIV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRIIQQA+F ELC MLDPGKP+FT KKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTTKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEG+E F+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN DLII+DTSGRHKQEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKPFVSRLLGMGD
Sbjct: 241 SVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SG MDKI +V+P DQQPELL KL+EG FTLR++YEQFQN+LKMGPIGQVFSMLPGFSSEL
Sbjct: 301 SGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG EKE QAKIKRYMT+MDSMT ELDS+NPKLM +SRI+RIARGSGRQ+R+V +MLE
Sbjct: 361 MPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTESRIIRIARGSGRQIRDVTDMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAK+WSKMKGLK+PK G+MS LS+N+N Q M+K LP +LKQ+GG+GGLQ LMKQM
Sbjct: 421 EYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGGMGGLQALMKQM 480
Query: 481 GSTKDM 486
G KDM
Sbjct: 481 GG-KDM 485
>gi|515679|gb|AAA66199.1| signal recognition particle 54 kDa subunit [Arabidopsis thaliana]
Length = 495
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/492 (81%), Positives = 449/492 (91%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I AIQ+M+N TIIDEK LN+CLNEITRALLQ+DV F LV+EMQTNIKKIV
Sbjct: 1 MVLAELGGRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGK +F PKK KP V+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPRVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATK+KIP+YGSYT SDPV+IAVEGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDRFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQ+A+LFEEMRQ+SEAT PDLVIFVMDSSIGQ AF+QA+AFKQ+V
Sbjct: 181 KENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQTV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGG LSAVAATKSPVIFIGTGEHMDEFEVFD KPFVSRLLG GD
Sbjct: 241 AVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLGNGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGF++K+ EVVP DQQPELL+ LS G FTLRIMY+QFQN+L MGP+ +VFSMLPG +E+
Sbjct: 301 SGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKEVFSMLPGMRAEM 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MP+G EKESQA+IKRYMTMMDSMTNEELDSSNPK+ N+SRIMRIARGSGR VREVMEMLE
Sbjct: 361 MPEGHEKESQAEIKRYMTMMDSMTNEELDSSNPKVFNESRIMRIARGSGRIVREVMEMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRL +W K+KGLK +KG MSALS+N N+Q +SKVLP MLKQIGG+ GLQ+LMKQM
Sbjct: 421 EYKRLTTMWGKVKGLKNLEKGNMSALSKNKNSQQLSKVLPAQMLKQIGGMSGLQSLMKQM 480
Query: 481 GSTKDMMGMFGG 492
GS KD+MGMFGG
Sbjct: 481 GSGKDLMGMFGG 492
>gi|414880279|tpg|DAA57410.1| TPA: hypothetical protein ZEAMMB73_937725 [Zea mays]
Length = 472
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/482 (84%), Positives = 440/482 (91%), Gaps = 22/482 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVLN+CLNEI+RALLQADVQFK+VR+MQ NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLNDCLNEISRALLQADVQFKMVRDMQANIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRI+QQA+F ELC MLDPGKPSFTPKKGKPSV+MFVGLQGSGKTTTC+K
Sbjct: 61 NLEALAAGTNKRRIMQQAVFTELCNMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEH+D+FEVFDVKPFVSRLLGMGDW
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFMDKIHEV+P DQQP+LLQKLSEG+F+LR+MYEQFQN+LKMGPIG
Sbjct: 301 SGFMDKIHEVIPTDQQPDLLQKLSEGSFSLRLMYEQFQNLLKMGPIG------------- 347
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
QAKIKRYMTMMDSMT+ ELDS+NPKLM +SRI+RIARGSGR VR+VM+MLE
Sbjct: 348 ---------QAKIKRYMTMMDSMTDAELDSTNPKLMTESRIIRIARGSGRPVRDVMDMLE 398
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKIW KMKGLK+ KKG+MSAL+RNMN Q MSK LP MLKQIGG+GGLQ+LMKQM
Sbjct: 399 EYKRLAKIWGKMKGLKLQKKGDMSALTRNMNVQQMSKALPPQMLKQIGGMGGLQSLMKQM 458
Query: 481 GS 482
GS
Sbjct: 459 GS 460
>gi|297743482|emb|CBI36349.3| unnamed protein product [Vitis vinifera]
Length = 431
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/421 (94%), Positives = 415/421 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL++LGGSISRA+QQMSNATIIDEKVLNECLNEITRALLQ+DVQFKLVR+MQTNIKK+V
Sbjct: 1 MVLSELGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKLV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DDLAAGHNKR+IIQQAIF ELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NFDDLAAGHNKRKIIQQAIFQELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAF+QSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATRPDLVIFVMDSSIGQAAFDQAQAFRQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS+EL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKGREKESQAKIKRYMTMMDSMTNEELD+SNPKLMN+SRIMRIARGSGRQVREVMEMLE
Sbjct: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDTSNPKLMNESRIMRIARGSGRQVREVMEMLE 420
Query: 421 E 421
+
Sbjct: 421 D 421
>gi|227202754|dbj|BAH56850.1| AT1G48900 [Arabidopsis thaliana]
Length = 450
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/494 (80%), Positives = 432/494 (87%), Gaps = 45/494 (9%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+TFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEA+LFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMY+QFQNIL MGP+ +VFSMLPG S+E+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG EKESQAKIKRYMTMMDSMTN+ELDSSNPK+ N+SR+MRIARGSGRQVREVMEML
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEML- 419
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
KQIGG+GGLQ+LMKQM
Sbjct: 420 --------------------------------------------KQIGGMGGLQSLMKQM 435
Query: 481 GSTKDMMGMFGGGE 494
GS KDMMGMFGGG+
Sbjct: 436 GSGKDMMGMFGGGD 449
>gi|15239909|ref|NP_199761.1| Signal recognition particle SRP54 subunit protein [Arabidopsis
thaliana]
gi|341942066|sp|P49966.2|SR542_ARATH RecName: Full=Signal recognition particle 54 kDa protein 2;
Short=SRP54
gi|10177616|dbj|BAB10763.1| SRP54 (signal recognition particle 54 KDa) protein [Arabidopsis
thaliana]
gi|332008438|gb|AED95821.1| Signal recognition particle SRP54 subunit protein [Arabidopsis
thaliana]
Length = 497
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/494 (78%), Positives = 437/494 (88%), Gaps = 2/494 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I AIQ+M+N TIIDEK LN+CLNEITRALLQ+DV F LV+EMQTNIKKIV
Sbjct: 1 MVLAELGGRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGS--GKTTTC 118
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGK +F PKK KPSV+MFVGLQG K
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPSVVMFVGLQGEVLEKPQLV 120
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
++KG+KPALVCADTFRAGAFDQLKQNATK+KIP+YGSYT SDPV+IAVEGV+
Sbjct: 121 PSMLIIIRRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDR 180
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FKKENCDLIIVDTSGRHKQ+A+LFEEMRQ+SEAT PDLVIFVMDSSIGQ AF+QA+AFKQ
Sbjct: 181 FKKENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQ 240
Query: 239 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 298
+V+VGAVI+TKMDGHAKGGG LSAVAATKSPVIFIGTGEHMDEFEVFD KPFVSRLLG G
Sbjct: 241 TVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLGNG 300
Query: 299 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
D SGF++K+ EVVP DQQPELL+ LS G FTLRIMY+QFQN+L MGP+ +VFSMLPG +
Sbjct: 301 DMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKEVFSMLPGMRA 360
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
E+MP+G EKESQAKIKRYMTMMDSMTNEELDSSNPK+ N+SRIMRIARGSGR VREVMEM
Sbjct: 361 EMMPEGHEKESQAKIKRYMTMMDSMTNEELDSSNPKVFNESRIMRIARGSGRIVREVMEM 420
Query: 419 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMK 478
LEEYKRL +W K+KGLK +KG MSALS+N N+Q +SKVLP MLKQIGG+ GLQ+LMK
Sbjct: 421 LEEYKRLTTMWGKVKGLKNLEKGNMSALSKNKNSQQLSKVLPAQMLKQIGGMSGLQSLMK 480
Query: 479 QMGSTKDMMGMFGG 492
QMGS KD+MGMFGG
Sbjct: 481 QMGSGKDLMGMFGG 494
>gi|357131064|ref|XP_003567163.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Brachypodium distachyon]
Length = 499
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/492 (79%), Positives = 438/492 (89%), Gaps = 1/492 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSI+RA+ +MSN T+IDEKV +CLN+ITRALLQADVQFK+V ++Q+NIK++V
Sbjct: 1 MVLAQLGGSITRALAKMSNDTVIDEKVFGDCLNDITRALLQADVQFKMVCDLQSNIKRVV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKR II+QA+F+ELC MLDPGKPSF+PKKG P V+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEALAAGTNKRGIIKQAVFSELCNMLDPGKPSFSPKKGNPCVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE F+
Sbjct: 121 YAYYHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYLESDPVKIAVEGVERFE 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN DLII+DTSGRHKQEAALFEEMRQ+SEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENYDLIILDTSGRHKQEAALFEEMRQISEATQPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVIVTKMDGHAKGGGALS+VAATKSPVIF GTGEH+DEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 SVGAVIVTKMDGHAKGGGALSSVAATKSPVIFTGTGEHIDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGFM+KIHEVVP DQQPE LQKL++ FTLR+MYEQFQNI MGPI QV SML GF +EL
Sbjct: 301 SGFMNKIHEVVPADQQPEFLQKLNQKIFTLRLMYEQFQNIRNMGPISQVLSMLRGFRAEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MP+G E+ESQAKIKRYMT+MDSMT+ ELDS N K MN+SRI+RIARGSGR VR+V++MLE
Sbjct: 361 MPQGHEQESQAKIKRYMTIMDSMTDAELDSPNLKFMNESRIIRIARGSGRPVRDVLDMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKRLAKI M +K KKG+ + RN N Q + LP +LKQIGGVGGLQ+L+KQ+
Sbjct: 421 EYKRLAKICISMSNIKPHKKGDKRPVVRNNNIQQIINALPPQVLKQIGGVGGLQSLVKQL 480
Query: 481 GSTKDMMGMFGG 492
S KDM G+FGG
Sbjct: 481 DS-KDMSGLFGG 491
>gi|145324887|ref|NP_001077690.1| signal recognition particle subunit SRP54 [Arabidopsis thaliana]
gi|332194243|gb|AEE32364.1| signal recognition particle subunit SRP54 [Arabidopsis thaliana]
Length = 431
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/430 (86%), Positives = 407/430 (94%), Gaps = 3/430 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+TFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEA+LFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMY+QFQNIL MGP+ +VFSMLPG S+E+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG EKESQAKIKRYMTMMDSMTN+ELDSSNPK+ N+SR+MRIARGSGRQVREVME+
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEICS 420
Query: 421 EYKRLAKIWS 430
RLA W+
Sbjct: 421 S--RLAA-WA 427
>gi|18394225|ref|NP_563970.1| Signal recognition particle protein 1 [Arabidopsis thaliana]
gi|586036|sp|P37106.1|SR541_ARATH RecName: Full=Signal recognition particle 54 kDa protein 1;
Short=SRP54
gi|5103829|gb|AAD39659.1|AC007591_24 Identical to gb|L19997 signal recognition particle 54 kDa subunit
(Srp54-1) from Arabidopsis thaliana. ESTs gb|T88590 and
gb|T20603 come from this gene [Arabidopsis thaliana]
gi|12745001|gb|AAK06880.1|AF344329_1 unknown protein [Arabidopsis thaliana]
gi|304111|gb|AAA19728.1| signal recognition particle 54 kDa subunit [Arabidopsis thaliana]
gi|21592315|gb|AAM64266.1| signal recognition particle 54 kDa protein 2 (SRP54), putative
[Arabidopsis thaliana]
gi|62320715|dbj|BAD95382.1| putative signal recognition particle 54 kDa subunit [Arabidopsis
thaliana]
gi|332191180|gb|AEE29301.1| Signal recognition particle protein 1 [Arabidopsis thaliana]
Length = 479
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/485 (79%), Positives = 430/485 (88%), Gaps = 16/485 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQM+N TIIDEKVLN+ LNEITRALLQ+DV F LV +MQTNIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKR II+QAIF ELC+MLDPGKP+F PKK KPSV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+K ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+ FK
Sbjct: 121 YAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE CDLIIVDTSGRHKQ A+LFEEMRQV+EAT PDLVIFVMDSSIGQAAF+QA+AFK++V
Sbjct: 181 KEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG GDW
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SG +DK+ EVVP D Q EL++ LS+GNFTLR MY+QFQ L++ P+ Q+FSMLPG S+E+
Sbjct: 301 SGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRI-PLNQLFSMLPGISAEM 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG +ES+ K+KRYMTMMDSMTN+ELDS NPK+ N+SRIMRIARGSGR VREVMEMLE
Sbjct: 360 MPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEMLE 419
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKR+AK MKG+KIPK G+ MSKV+P MLKQ+GG+ GLQ+LMKQM
Sbjct: 420 EYKRIAKT---MKGIKIPKNGD------------MSKVIPPQMLKQMGGMSGLQSLMKQM 464
Query: 481 GSTKD 485
GS KD
Sbjct: 465 GSAKD 469
>gi|115464807|ref|NP_001056003.1| Os05g0509500 [Oryza sativa Japonica Group]
gi|33235565|dbj|BAC80140.1| signal recognition particle 54kDa subunit [Oryza sativa Japonica
Group]
gi|48475202|gb|AAT44271.1| putative signal recognition particle 54 KD protein (SRP54) [Oryza
sativa Japonica Group]
gi|113579554|dbj|BAF17917.1| Os05g0509500 [Oryza sativa Japonica Group]
gi|215697189|dbj|BAG91183.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632180|gb|EEE64312.1| hypothetical protein OsJ_19149 [Oryza sativa Japonica Group]
Length = 483
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/481 (75%), Positives = 421/481 (87%), Gaps = 1/481 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+ID+K +CL+EI RALLQ+DVQ ++V +M+ NI++ V
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDDKAFADCLHEIARALLQSDVQIRMVSDMRANIRRAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLD L AG NKRRIIQQA+F ELC MLDPGKPSFTP KGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDALPAGTNKRRIIQQAVFAELCNMLDPGKPSFTPTKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQ KG+KP+LVCADTFRAGAFDQLKQNATKAKIP+YGSY ESDPV+IAVEGVE F+
Sbjct: 121 YAHYHQLKGFKPSLVCADTFRAGAFDQLKQNATKAKIPYYGSYMESDPVKIAVEGVERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KEKSDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVIVTK+DGHAKGGGALSAVAATKSPV+FIGTGEHM +FEVFDVKPFVSRLLGMGD
Sbjct: 241 SVGAVIVTKLDGHAKGGGALSAVAATKSPVVFIGTGEHMQDFEVFDVKPFVSRLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SG ++KI + +P DQQPEL+Q+L EG FTLR+ YE FQN+L MGPIGQV SM+PGF SEL
Sbjct: 301 SGLVNKIKDAMPADQQPELMQRLIEGTFTLRVFYELFQNLLNMGPIGQVLSMIPGFRSEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG +KESQAKIKRYMT+MDSMTN ELDS+NPKLM++SRI R+ARGSGR +++V +MLE
Sbjct: 361 MPKGHDKESQAKIKRYMTIMDSMTNAELDSTNPKLMSESRIKRVARGSGRTMKDVTDMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKR+AK+ SK+K K+PK + + ++ ++ ++P+ +L QIGGV LQ++MKQM
Sbjct: 421 EYKRIAKVCSKLKK-KLPKNMDRNVMNNKDTLNTINNLIPKQLLNQIGGVNPLQSVMKQM 479
Query: 481 G 481
G
Sbjct: 480 G 480
>gi|125552939|gb|EAY98648.1| hypothetical protein OsI_20572 [Oryza sativa Indica Group]
Length = 483
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/481 (75%), Positives = 421/481 (87%), Gaps = 1/481 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+ID+K +CL+EI RALLQ+DVQ ++V +M+ NI++ V
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDDKAFADCLHEIARALLQSDVQIRMVSDMRANIRRAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLD L AG NKRRIIQQA+F ELC MLDPGKPSFTP KGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDALPAGTNKRRIIQQAVFAELCNMLDPGKPSFTPTKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQ KG+KP+LVCADTFRAGAFDQLKQNATKAKIP+YGSY ESDPV+IAVEGVE F+
Sbjct: 121 YAHYHQLKGFKPSLVCADTFRAGAFDQLKQNATKAKIPYYGSYMESDPVKIAVEGVERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KEKSDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVIVTK+DGHAKGGGALSAVAATKSPV+FIGTGEHM +FEVFDVKPFVSRLLGMGD
Sbjct: 241 SVGAVIVTKLDGHAKGGGALSAVAATKSPVVFIGTGEHMQDFEVFDVKPFVSRLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SG ++KI + +P DQQPEL+Q+L EG FTLR+ Y+ FQN+L MGPIGQV SM+PGF SEL
Sbjct: 301 SGLVNKIKDAMPADQQPELMQRLIEGTFTLRVFYDLFQNLLNMGPIGQVLSMIPGFRSEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG +KESQAKIKRYMT+MDSMTN ELDS+NPKLM++SRI R+ARGSGR +++V +MLE
Sbjct: 361 MPKGHDKESQAKIKRYMTIMDSMTNAELDSTNPKLMSESRIKRVARGSGRTMKDVTDMLE 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKR+AK+ SK+K K+PK + + ++ ++ ++P+ +L QIGGV LQ++MKQM
Sbjct: 421 EYKRIAKVCSKLKK-KLPKNMDRNVMNNKDTLNTINNLIPKQLLNQIGGVNPLQSVMKQM 479
Query: 481 G 481
G
Sbjct: 480 G 480
>gi|1711514|sp|P49970.1|SR543_HORVU RecName: Full=Signal recognition particle 54 kDa protein 3;
Short=SRP54
gi|1020004|gb|AAA79356.1| signal recognition particle 54 kDa subunit [Hordeum vulgare]
Length = 493
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/493 (72%), Positives = 425/493 (86%), Gaps = 6/493 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA +GGSISRA+ MS+A ++DE VL ECLNEI RAL+Q+DV+FK V ++Q NI+K V
Sbjct: 1 MVLADVGGSISRALA-MSSAAVVDESVLRECLNEIARALMQSDVRFKTVCDLQANIRKTV 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRII+ ++ ELCKMLD GKP+F PKKGKP+V+MFVGLQGSGKTTTCTK
Sbjct: 60 NLEALAAGTNKRRIIETSVGKELCKMLDTGKPAFVPKKGKPNVVMFVGLQGSGKTTTCTK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEG+E F+
Sbjct: 120 YAHYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLEKFR 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E DLII+DTSGRH QEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 180 QEKSDLIIIDTSGRHMQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVIVTK+DGHAKGGGALSAVAATKSPVIFIGTGEH+D+F+VF+V+PFV+RLLG GD
Sbjct: 240 SVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFVARLLGRGDL 299
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK+ +VP DQQ EL+ KLSEG FTLR++YEQFQN+LKMGP+ Q+FSMLPGFSSEL
Sbjct: 300 PGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQFQNLLKMGPMSQIFSMLPGFSSEL 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPKG+EK+S+ K KRYMT+MDSMT ELDS+NPKLM +SRI+R+ARGSGR+V++VMEMLE
Sbjct: 360 MPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLMTESRIIRVARGSGRKVKDVMEMLE 419
Query: 421 EYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 479
EYKRLAK+WSK K IP+ G+MSA + Q M KV+P +++Q+GG GL+ L+KQ
Sbjct: 420 EYKRLAKMWSKRNVSKLIPQNGKMSAQA----IQKMLKVMPPQVVQQMGGKSGLEALLKQ 475
Query: 480 MGSTKDMMGMFGG 492
+G KD M G
Sbjct: 476 LGGGKDTSKMLAG 488
>gi|413945975|gb|AFW78624.1| hypothetical protein ZEAMMB73_996048 [Zea mays]
Length = 482
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/481 (73%), Positives = 414/481 (86%), Gaps = 5/481 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSI+RA+ +MSNAT++DEKVL +CLNEI RALLQADV+F VR+++ NI +IV
Sbjct: 1 MVLAELGGSIARALARMSNATVVDEKVLADCLNEICRALLQADVRFDTVRDVKANINRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLD LAAG NKRRIIQQA+ +EL +MLDPGKPSFTP KGKP+V+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDALAAGTNKRRIIQQAVVDELRRMLDPGKPSFTPSKGKPNVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA YH++KG+ PALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+ F
Sbjct: 121 YADYHRRKGFNPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDMFM 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KEKYDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+ +FEVF+V PFVSRLLGMGD
Sbjct: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHIPDFEVFEVNPFVSRLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SG ++KI E +P +QQ +++ KL EG FTLR++YE FQN+ ++GP+GQ+ SM+PGFS +
Sbjct: 301 SGLVNKIQEFMPDNQQMQIMDKLGEGTFTLRLLYEMFQNLQRIGPLGQLVSMIPGFSGQF 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ KG EKE QAKIKRYMTMMDSMT+ ELD ++PKLMN SRI RIARGSGR+V EV+ ML+
Sbjct: 361 IEKGNEKEGQAKIKRYMTMMDSMTDAELDGTDPKLMNQSRINRIARGSGRRVEEVVHMLD 420
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
EYKR+AK+W K+ L ++ +M N + + +S +P ML Q+GG+ GLQN++KQM
Sbjct: 421 EYKRIAKVWKKLPVLNNNRRSDM-----NRDIRRISDAIPPNMLTQLGGIAGLQNMIKQM 475
Query: 481 G 481
G
Sbjct: 476 G 476
>gi|357455285|ref|XP_003597923.1| Signal recognition particle [Medicago truncatula]
gi|355486971|gb|AES68174.1| Signal recognition particle [Medicago truncatula]
Length = 512
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/535 (69%), Positives = 427/535 (79%), Gaps = 66/535 (12%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSI+RA+ +M+N T+IDEK L +CLNEI RALLQ+DV+F+L+R+MQ NIK IV
Sbjct: 1 MVLAELGGSITRALHKMNNTTVIDEKALTDCLNEINRALLQSDVRFELIRDMQINIKNIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQ---------- 110
NL+ LAAGHNKR+IIQQA+F+ELC+ML+PGKPSF PK+ K SV+MFVGLQ
Sbjct: 61 NLEQLAAGHNKRKIIQQAVFDELCRMLNPGKPSFVPKREKTSVVMFVGLQVPLDWCGFWF 120
Query: 111 -----------GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPF 159
GSGKTTTCTKYA+ +QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPF
Sbjct: 121 YLPAGCQIGVTGSGKTTTCTKYAHCYQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPF 180
Query: 160 YGS------------YTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
YGS Y ESDPV+IAVEGVE FK+E+ DLIIVDTSGRHKQEA+LFEEMRQ
Sbjct: 181 YGSNYYFAVPPFLNSYMESDPVKIAVEGVERFKEEDHDLIIVDTSGRHKQEASLFEEMRQ 240
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+SEAT PDLVIFVMDSSIGQAAF+QAQAFKQ V+VGAVI+TKMDGHAKGGG+LSAVAATK
Sbjct: 241 LSEATKPDLVIFVMDSSIGQAAFNQAQAFKQIVAVGAVIITKMDGHAKGGGSLSAVAATK 300
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SPVIFIGTGEHMD+FEVF+V+PFVSRLLGMGD SG +DKIH VVPMDQQ +L+QKLS+GN
Sbjct: 301 SPVIFIGTGEHMDQFEVFEVQPFVSRLLGMGDLSGLIDKIHGVVPMDQQADLVQKLSKGN 360
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTN-- 385
FTLRIMYEQFQN LKMGP+G++ SM+PGFSSEL+P+G E ES AK+K YMTMMDSMTN
Sbjct: 361 FTLRIMYEQFQNALKMGPMGELVSMIPGFSSELIPQGHENESSAKLKHYMTMMDSMTNEG 420
Query: 386 -------EELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIP 438
E+LDSSNPKL+N+SR+MRIARGSGR VREV+E++E YKR+AK
Sbjct: 421 MHNELIVEDLDSSNPKLINESRMMRIARGSGRLVREVLELMEVYKRIAK----------- 469
Query: 439 KKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQMGSTKDMMGMFGGG 493
E S +SR N Q M K P +LKQ GGV GLQ DMMGMFGGG
Sbjct: 470 ---EFSKISRCRNPQDMVKSFPPHLLKQFGGVKGLQ----------DMMGMFGGG 511
>gi|242091039|ref|XP_002441352.1| hypothetical protein SORBIDRAFT_09g025050 [Sorghum bicolor]
gi|241946637|gb|EES19782.1| hypothetical protein SORBIDRAFT_09g025050 [Sorghum bicolor]
Length = 482
Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/484 (73%), Positives = 415/484 (85%), Gaps = 7/484 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSI+RA+ +MSNAT++DEKVL +CLNEI RALLQADV+F+ VR+++ NIK++V
Sbjct: 1 MVLAELGGSIARALSRMSNATVVDEKVLADCLNEICRALLQADVRFETVRDVKANIKRVV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLD LAAG NKRRIIQQA+ +E+ +MLDPGKPSFTP KGKP+++MFVGLQGSGKTTTCTK
Sbjct: 61 NLDALAAGTNKRRIIQQAVVDEIRRMLDPGKPSFTPSKGKPNLVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA YH++KG+ PALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+ F+
Sbjct: 121 YADYHRRKGFNPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDMFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE CDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KEKCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+ +FEVF+V PFVSRLLGMGD
Sbjct: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHILDFEVFEVNPFVSRLLGMGDL 300
Query: 301 SGFMDKIHEVV-PMDQQPELL-QKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
SG ++KIHEV+ P +Q P ++ +L EG FTLR++YE FQ + MGP+GQV SM+PGFS+
Sbjct: 301 SGLVNKIHEVIMPNNQPPNIIGPQLVEGTFTLRLLYEMFQTLQSMGPLGQVVSMIPGFSA 360
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
+ + KG EKE QAKIKRYMTMMDSMT+ ELD +NPKLMN SRI RIARGSGR V EV+ M
Sbjct: 361 QFIEKGNEKEGQAKIKRYMTMMDSMTDAELDGTNPKLMNQSRINRIARGSGRLVEEVVHM 420
Query: 419 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMK 478
LEEYKR+AK+W K+ P L+ N + + ++ +P ML Q+GG GLQN+MK
Sbjct: 421 LEEYKRIAKMWKKL-----PLPTNNRRLNTNRDIRPIANAIPPNMLNQLGGFVGLQNMMK 475
Query: 479 QMGS 482
QMG+
Sbjct: 476 QMGA 479
>gi|449522379|ref|XP_004168204.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Cucumis sativus]
Length = 392
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/350 (94%), Positives = 344/350 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+QQMS+AT+IDEKVLNECLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKR+IIQQA+FNELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE+CDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVF 350
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY+QFQN+LKMGPI QV
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVL 350
>gi|297849956|ref|XP_002892859.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338701|gb|EFH69118.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 444
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/471 (74%), Positives = 394/471 (83%), Gaps = 32/471 (6%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
+N+CLNEITRALLQ+DV F LV+EMQTNIKKIVNLDDLAAGHNKR II+Q
Sbjct: 1 MNDCLNEITRALLQSDVSFPLVKEMQTNIKKIVNLDDLAAGHNKRLIIEQ---------- 50
Query: 88 DPGKPSFTPKKGKPS-VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFD 146
+P F PKK KPS V+MFVGLQG+GKTTTCTKYAYYHQKKG+K ALVCADTFRAG FD
Sbjct: 51 -DERPVFAPKKAKPSSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKTALVCADTFRAGVFD 109
Query: 147 QLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMR 206
QLKQNATKAKIPFYGSYTESDPV+IA EGV+ FKKE CDLIIVDTSGRHKQEA+L EE+
Sbjct: 110 QLKQNATKAKIPFYGSYTESDPVKIAAEGVDRFKKEKCDLIIVDTSGRHKQEASLCEEIL 169
Query: 207 QVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 266
QV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQ+VSVGAVI+TKMDGHAKGGGALSAVAAT
Sbjct: 170 QVAEATEPDLVIFVMDSSIGQAAFDQAQAFKQTVSVGAVIITKMDGHAKGGGALSAVAAT 229
Query: 267 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 326
KSPVIFIGTGEHMDEFEVFDVKPFVSRLLG GDWSG +DK+ EVVP D Q EL++ LS+G
Sbjct: 230 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQHELVENLSQG 289
Query: 327 NFTLRIMYEQFQNILKMGPIGQV---FSMLPGFSSELMPKGREKESQAKIKRYMTMMDSM 383
NFTLR MY+QFQ L++ P+ QV S++ +ELMPKG ES+A KRYMTMMDSM
Sbjct: 290 NFTLRTMYDQFQCSLQI-PLNQVRISCSIVACTIAELMPKGHGDESRA--KRYMTMMDSM 346
Query: 384 TNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEM 443
TN+ELDSSN K+ N+SRIMRIARGSGR VREVME+LEEYKR+AK MKG+KIPK G+M
Sbjct: 347 TNKELDSSNTKVFNESRIMRIARGSGRLVREVMELLEEYKRIAKT---MKGIKIPKNGDM 403
Query: 444 SALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQMGSTKDMMGMFGGGE 494
S +KV+P MLKQ+GG+ GLQ+LMKQMGS KDMMGMF GG+
Sbjct: 404 S-----------NKVIPPQMLKQMGGMSGLQSLMKQMGSAKDMMGMFSGGD 443
>gi|303291107|ref|XP_003064840.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226453866|gb|EEH51174.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 513
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/495 (62%), Positives = 399/495 (80%), Gaps = 19/495 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG +++ A++++ T++DE+++ CL E+TRALLQADV + V+ NI K V
Sbjct: 1 MVLGELGTALAGALKKLGEHTVVDEEIMEACLKEVTRALLQADVNVQYVK----NIVKRV 56
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLD-------------PGKPSFTPKKGKPSVIMFV 107
N+++LAAG N R+++++A+F EL ML+ + + PKKG P+V+MFV
Sbjct: 57 NINELAAGLNARKLLEKAVFTELVNMLEGEGAQNAQNEGVTTKREKYAPKKGVPNVVMFV 116
Query: 108 GLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD 167
GLQG GKTTTCTKYA+++QKKG+KPALVCADTFRAGAFDQLKQNATKA+IPFYGSYTE+D
Sbjct: 117 GLQGCGKTTTCTKYAHHYQKKGFKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTETD 176
Query: 168 PVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQ 227
P +IA +GVE FK E DLIIVDTSGRHKQE+ALFEEMR V+EA NPD+ IFVMDSSIGQ
Sbjct: 177 PAKIASDGVERFKAEKNDLIIVDTSGRHKQESALFEEMRAVAEAVNPDMTIFVMDSSIGQ 236
Query: 228 AAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDV 287
AA DQA AFK +V VG+V+VTK+DGHAKGGGA+SAVAAT++P++FIGTGEH+DEFE FD
Sbjct: 237 AASDQAAAFKNTVDVGSVVVTKLDGHAKGGGAISAVAATRAPIVFIGTGEHIDEFEAFDA 296
Query: 288 KPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIG 347
KPFVSRLLG+GDW+GF+DKI +V+P DQQPELL KL++G FT+RI+YEQF NI KMGP+
Sbjct: 297 KPFVSRLLGLGDWTGFIDKIADVIPADQQPELLDKLAQGQFTMRILYEQFANIQKMGPMS 356
Query: 348 QVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIAR 406
V SM+PGF +++MPKG+EK+SQAKIKR M MMDSMT+EELD+++ KL+ D R+ RI R
Sbjct: 357 AVMSMIPGFGNDVMPKGQEKQSQAKIKRMMCMMDSMTDEELDTTSLKLLQDPKRMERIGR 416
Query: 407 GSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMS-ALSRNMNAQHMSKVLPQGMLK 465
G+GR +V+E++EEYKRLAK+ KMKGLK PKKG + + N N M++ +P GMLK
Sbjct: 417 GAGRSPMDVVELIEEYKRLAKMMGKMKGLKAPKKGGYGQSQALNQNLAQMAQAIPPGMLK 476
Query: 466 QIGGVGGLQNLMKQM 480
Q+GG+G LQ +MKQ+
Sbjct: 477 QMGGMGALQGMMKQL 491
>gi|307105722|gb|EFN53970.1| hypothetical protein CHLNCDRAFT_31879 [Chlorella variabilis]
Length = 490
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/486 (64%), Positives = 393/486 (80%), Gaps = 6/486 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS+A+ ++ ++DE VL+ CL EI ALLQADV +LV ++ N+KK V
Sbjct: 1 MVLAELGQRISQALGSLNAVPVVDEAVLDACLKEIATALLQADVNVRLVANLRNNVKKRV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTP-KKGKPSVIMFVGLQGSGKTTTCT 119
N++ LA+G NK+++I++A+F+ELC MLD G P T KKGK +++MFVGLQG+GKTTTCT
Sbjct: 61 NMEQLASGLNKQKVIEKAVFDELCSMLDGGDPKKTELKKGKTNIVMFVGLQGAGKTTTCT 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
KYA+ +KKG+KPA+VCADTFRAGAFDQLKQNATKA+IPFYGSYTE+DP IA +GV+ F
Sbjct: 121 KYAFLWKKKGFKPAMVCADTFRAGAFDQLKQNATKAQIPFYGSYTETDPAIIAQQGVDRF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KKE DLIIVDTSGRHKQE ALFEEMRQV+ A NP VIFVMD SIGQAAFDQA+AF +S
Sbjct: 181 KKEGRDLIIVDTSGRHKQEEALFEEMRQVAAAVNPQHVIFVMDGSIGQAAFDQAKAFHES 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V VG VI+TK+DGHAKGGGALSAVAAT+SP+ FIGTGEHM EFE F+ + FV RLLG GD
Sbjct: 241 VDVGQVIITKLDGHAKGGGALSAVAATRSPITFIGTGEHMHEFESFETQKFVGRLLGRGD 300
Query: 300 WSGFMDKIHEVVP-MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
W F+DK+ +V+P D Q EL+ K+S+G FTLRIMYEQF NI+KMGP+GQV SM+PGFS+
Sbjct: 301 WGSFIDKVKDVIPEEDAQQELIDKISKGEFTLRIMYEQFANIMKMGPMGQVMSMIPGFSN 360
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 417
LM G EKESQAKIKRYMT+MDSMT +ELDSS+ KL+ + SRI+R ARGSG V++V+
Sbjct: 361 ALMQPGSEKESQAKIKRYMTIMDSMTEKELDSSSTKLLGEQSRILRWARGSGSSVQDVLL 420
Query: 418 MLEEYKRLAKIWSK-MKGLKIPK--KGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQ 474
+LEEYKRLAK++S MKG+K+PK KG+++ + N MS++LP MLK +GG +Q
Sbjct: 421 LLEEYKRLAKVFSTAMKGMKLPKNMKGDINPRNMQQNIAQMSRMLPPHMLKMMGGPAAIQ 480
Query: 475 NLMKQM 480
+L+KQM
Sbjct: 481 SLIKQM 486
>gi|255082746|ref|XP_002504359.1| type II secretory pathway family [Micromonas sp. RCC299]
gi|226519627|gb|ACO65617.1| type II secretory pathway family [Micromonas sp. RCC299]
Length = 512
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 314/494 (63%), Positives = 401/494 (81%), Gaps = 12/494 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG +++ A++++ T++DE+V++ CL E+T+ALLQADV + V +M+ NI K V
Sbjct: 1 MVLGELGSALAGALRKLGEHTVVDEEVMDACLKEVTKALLQADVNVQYVVQMKKNIVKQV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPG----KPSFTPKKGKPSVIMFVGLQGSGKTT 116
N+ +LAAG N R+++++A+FNEL ML+ G K F PKKGKP+V+MFVGLQG GKTT
Sbjct: 61 NIQELAAGLNARKLLEKAVFNELVNMLEGGGAEVKEKFVPKKGKPNVVMFVGLQGCGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTKYAY+ QKKG+KPALVCADTFRAGAFDQLKQNATKA+IPFYGSYTE+DP +IA +GV
Sbjct: 121 TCTKYAYHFQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTETDPAKIAADGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
E FK E DLIIVDTSGRHKQE +LFEEMRQV+ A PD+ IFVMDSSIGQAA DQA+AF
Sbjct: 181 ERFKDEKNDLIIVDTSGRHKQEDSLFEEMRQVAAAVQPDMTIFVMDSSIGQAAQDQARAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K +V VG+VI+TK+DGHAKGGGA+SAVAATKSP+ FIGTGEH+DEFE FD KPFVSRLLG
Sbjct: 241 KATVDVGSVIITKLDGHAKGGGAISAVAATKSPIAFIGTGEHIDEFEAFDTKPFVSRLLG 300
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
+GDW+G +DKI++V+PMDQQPEL+ KL G FT+RI+YEQF NI KMGP+ V SM+PG
Sbjct: 301 LGDWTGLIDKINDVIPMDQQPELMDKLVAGQFTMRILYEQFANIQKMGPMSSVMSMIPGM 360
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREV 415
++PKG+EK SQAKIKR M +MDSMT+EELD+++ K++ D R+ RI RG+GR +V
Sbjct: 361 DG-MLPKGQEKASQAKIKRMMCLMDSMTDEELDTTSLKILQDPKRMERIGRGAGRGPGDV 419
Query: 416 MEMLEEYKRLAKIWSKMKGLKIPKK---GEMSALSRNMNAQHMSKVLPQGMLKQIGGVGG 472
+E++EEYKR++K+ KMKG+K+PKK G A+++NM Q M+ +P MLKQ+G + G
Sbjct: 420 VELVEEYKRMSKMMGKMKGMKMPKKGGYGHSQAMAQNM--QQMAGAIPPHMLKQMGSMAG 477
Query: 473 LQNLMKQMGSTKDM 486
LQN+MKQ+ KDM
Sbjct: 478 LQNMMKQL-EGKDM 490
>gi|428185212|gb|EKX54065.1| hypothetical protein GUITHDRAFT_159167 [Guillardia theta CCMP2712]
Length = 494
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 309/483 (63%), Positives = 393/483 (81%), Gaps = 5/483 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I++A++ M++ T+IDE+ ++ L EI+ ALL +DV KLV ++ N+K +
Sbjct: 1 MVLAELGGRIAQAMRSMTSKTVIDEEAVDNMLKEISSALLSSDVNVKLVSSLRKNVKNRI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLA G N+RR+IQQA+F ELC+ML+PGK + PKKGKP+VIMFVGLQGSGKTT+CTK
Sbjct: 61 NLEDLATGLNRRRMIQQAVFEELCEMLNPGKKPYQPKKGKPNVIMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA ++Q+K WK LVC+DTFRAGAFDQLKQNATKA+IPFYGSYTE DPV+IA +GVE FK
Sbjct: 121 YALHYQRKSWKTCLVCSDTFRAGAFDQLKQNATKARIPFYGSYTERDPVKIARDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQEA+LFEEM+Q++ A PD ++FV+DSSIGQAA DQA AFK++V
Sbjct: 181 KEGQEIIIVDTSGRHKQEASLFEEMQQIAAAVEPDDIVFVLDSSIGQAAHDQATAFKEAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVG+VI+TK+DGHAKGGGALSAVAAT SP++FIGTGEH D+FE F+V+ FVSRLLG+GD
Sbjct: 241 SVGSVIMTKLDGHAKGGGALSAVAATSSPIVFIGTGEHFDDFETFEVRSFVSRLLGLGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G M+ I + +D+QPEL QKLS+G FTLR MYEQFQN++KMGPIG+V SM+PG S+ L
Sbjct: 301 GGLMNAIKD-AGLDKQPELYQKLSQGVFTLRDMYEQFQNVMKMGPIGKVMSMIPGMSA-L 358
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEML 419
M KGRE ESQ + K++MT+MDSMT++ELD+ N K+ D+R+ RIA+GSG ++V E++
Sbjct: 359 MTKGREHESQERFKKFMTIMDSMTDDELDTENVNKIFTDTRVFRIAQGSGSHPQQVWELI 418
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRN--MNAQHMSKVLPQGMLKQIGGVGGLQNLM 477
EE+KR K+ +KMK LKI K GEM ++RN Q M K L MLKQIGG+ GLQNLM
Sbjct: 419 EEFKRFQKMIAKMKHLKIGKNGEMPQMTRNPQQAMQQMGKCLDPRMLKQIGGMSGLQNLM 478
Query: 478 KQM 480
K M
Sbjct: 479 KSM 481
>gi|390352988|ref|XP_780650.3| PREDICTED: signal recognition particle 54 kDa protein-like
[Strongylocentrotus purpuratus]
Length = 513
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 302/490 (61%), Positives = 383/490 (78%), Gaps = 12/490 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATIIDE VLN LNEI RALL+ADV +LV+ ++ N+K ++
Sbjct: 1 MVLADLGRKITSALKSLSNATIIDEDVLNSMLNEICRALLEADVNIRLVKALKENVKSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR++IQ A+F EL K++DPG +TP K KP++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAAGLNKRKMIQTAVFKELVKLVDPGVKVWTPTKAKPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK AL+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYYYQKKGWKVALICADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVIIAADGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN ++IIVDTSGRHKQE +LFEEM QV+ T+PD +IFVMD+SIGQA QA+AFK+ V
Sbjct: 181 KENFEIIIVDTSGRHKQEDSLFEEMLQVANVTSPDNIIFVMDASIGQACESQAKAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+D+FE F KPF+S+LLGMGD
Sbjct: 241 DVASVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK+ E + +D EL+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGFSS+
Sbjct: 301 EGLIDKVSE-LNLDDNEELINKLKHGEFTLRDMYEQFQNIMKMGPFGQIMGMIPGFSSDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDS-SNPKLM--NDSRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MTMMDSM +EELDS KL R+ R+ARGSG VREV E
Sbjct: 360 MTKGNEQESMARLKKLMTMMDSMKDEELDSREGAKLFMRCPGRVQRVARGSGVSVREVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLKIPKKGEMSA-LSRNMNAQHMSKV-------LPQGMLKQIGG 469
+L++Y++ A++ KM G+K KG+ +S+N+N M+K+ + +L+Q+GG
Sbjct: 420 LLQQYQKFAQMVKKMGGIKGLFKGKSGGDMSKNVNPAQMAKINQSIARAMDPRVLQQLGG 479
Query: 470 VGGLQNLMKQ 479
+ GLQ++M+Q
Sbjct: 480 MNGLQSMMRQ 489
>gi|405977168|gb|EKC41631.1| Signal recognition particle 54 kDa protein [Crassostrea gigas]
Length = 504
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 297/504 (58%), Positives = 389/504 (77%), Gaps = 17/504 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ + NATII+E+VLNE L EI +AL++ADV KLV+ ++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLGNATIINEEVLNEMLKEICKALIEADVNIKLVKSLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLIDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE F+
Sbjct: 121 LAYYYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEIDPVVIAQEGVEKFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ TNPD ++FVMD+SIGQA QA+AFK V
Sbjct: 181 SENFEIIIVDTSGRHKQEDSLFEEMLQVNNVTNPDNIVFVMDASIGQACESQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH D+FE F V+PFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHTDDFEPFKVQPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D +L++KL +G FTLR MYEQFQNI+KMGP Q+ M+PGFSS+
Sbjct: 301 EGLIDKVNE-LKLDDNEDLMKKLKQGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSSDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVME 417
+ KG E+ES A++K+ MT+MDSM ++ELDS + + + RI R+ARG+G +REV E
Sbjct: 360 LTKGGEQESMARLKKLMTIMDSMNDKELDSLDGERLFTRQTGRIQRVARGAGVSIREVNE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
+L +YK+ A++ KM G+K + K G+M S+N+N Q M+K++ +L+Q+GG
Sbjct: 420 LLAQYKKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLQQMGG 476
Query: 470 VGGLQNLMKQM--GSTKDMMGMFG 491
+ GLQ +M+Q G+ MFG
Sbjct: 477 MQGLQGMMRQFQQGAAGKFGNMFG 500
>gi|452824083|gb|EME31088.1| signal recognition particle subunit SRP54 [Galdieria sulphuraria]
Length = 482
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 282/483 (58%), Positives = 391/483 (80%), Gaps = 6/483 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL++LG IS A+++++N T++DE+ LNE LNE++RALL+ADV K+V+ ++ ++KK V
Sbjct: 1 MVLSELGKKISGALRKLANRTVVDEEALNEMLNEVSRALLEADVNVKMVQALRQSVKKKV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL++LAAG N+R++IQ+A+F ELC ML PG KKG+P+V+MFVGLQG+GKTTTC K
Sbjct: 61 NLEELAAGVNRRKLIQKAVFEELCNMLSPGTSPPPLKKGRPNVVMFVGLQGNGKTTTCVK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KGWK ALVCADTFRAGAFDQLKQ+ATKA++PFYGS+TE+D V++A EGV+ F+
Sbjct: 121 YAYYHQRKGWKTALVCADTFRAGAFDQLKQSATKARVPFYGSHTETDAVKVAREGVDLFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE +LIIVDTSGRHKQ+ ALFEEM Q+++A P+ +IFVMD ++GQ+ +DQA AF+Q V
Sbjct: 181 KEKYELIIVDTSGRHKQDTALFEEMEQIAQAVQPNSIIFVMDGTMGQSVYDQALAFRQRV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+V+VTK+DGHAKGGGALSAV+ATKSPV+FIGTGE +D+ E F + FV RLLG+GD
Sbjct: 241 NVGSVVVTKLDGHAKGGGALSAVSATKSPVVFIGTGEMLDDLEPFAPQSFVQRLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SGF++ + E +DQ P++L+++ EG TLR +Y+QFQ++LKMGP+G+V SM PG +L
Sbjct: 301 SGFVNAVKE-AGVDQNPDILKRIQEGVLTLRDLYDQFQSVLKMGPMGKVLSMFPGM-QDL 358
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKL-MNDSRIMRIARGSGRQVREVMEML 419
+PKG+E+E ++K+++++M+SMT++ELD NPK+ N SR++RI RGSGR V++V ++L
Sbjct: 359 IPKGKEREGTLRVKKFLSIMNSMTDDELD--NPKVQFNQSRMIRIGRGSGRDVKDVEDLL 416
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 479
EYKRL+K+ S++ K K G+ S L RNM Q +S+++ ML+Q+GG GLQNLMKQ
Sbjct: 417 AEYKRLSKLVSRVGKNKALKTGDFSQLQRNM-PQQLSRMMDPKMLQQMGGASGLQNLMKQ 475
Query: 480 MGS 482
S
Sbjct: 476 FSS 478
>gi|302835417|ref|XP_002949270.1| hypothetical protein VOLCADRAFT_74111 [Volvox carteri f.
nagariensis]
gi|300265572|gb|EFJ49763.1| hypothetical protein VOLCADRAFT_74111 [Volvox carteri f.
nagariensis]
Length = 505
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 296/491 (60%), Positives = 387/491 (78%), Gaps = 13/491 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS+AI M A IIDEKVL+ L EI ALLQADV K V ++ +KK V
Sbjct: 1 MVLAELGTRISKAISSMGQAMIIDEKVLDTVLKEICTALLQADVNVKQVANLRNGVKKRV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
N+ +LAAG NK+R+I++A+F+ELC MLD P K +KGK +MFVGLQGSGKTT
Sbjct: 61 NIAELAAGLNKQRVIEKAVFDELCDMLDSGVDPKKLELKKEKGKQHTVMFVGLQGSGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTKYAY+++KKGWKPALVCADT+RAGAFDQLKQNATKA+IPFYGSY E+DP IA +GV
Sbjct: 121 TCTKYAYFYKKKGWKPALVCADTYRAGAFDQLKQNATKAQIPFYGSYKETDPAAIAQQGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
FK++ DLIIVDTSGRHKQEAALFEEM+QV+ A +PDL+IFVMD SIGQAAFDQA+AF
Sbjct: 181 LRFKEDGRDLIIVDTSGRHKQEAALFEEMKQVAAAVSPDLIIFVMDGSIGQAAFDQAKAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K++V VGAVI+TK+DGHAKGGGALSAVAATKSP+IF+GTGEHMD+FE F+ K FV RLLG
Sbjct: 241 KEAVEVGAVIITKLDGHAKGGGALSAVAATKSPIIFLGTGEHMDQFESFETKRFVQRLLG 300
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
GD SG MDKI +V+P D+QPELL +S+GN T+ ++ + F+++L++GP+ Q+ SMLPGF
Sbjct: 301 KGDVSGLMDKIQDVIPEDKQPELLDTISKGNVTMSVLKDMFESVLELGPMSQMMSMLPGF 360
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREV 415
+S+L+PKG +K+SQ I+RY+T+++SMT++E++++N K++ + SR+ R+ARGSG ++V
Sbjct: 361 NSDLLPKGNDKQSQMMIRRYITIIESMTDKEMNTTNIKILQEPSRVNRLARGSGSTPQQV 420
Query: 416 MEMLEEYKRLAKIWSK-MKGLKIPK-----KGEMSALSRNMNAQ--HMSKVLPQGMLKQI 467
+ +LE YK +K ++ +K +PK KG++ R M MS+ LP +L+Q+
Sbjct: 421 LALLESYKHYSKYATQALKAANLPKNLKSMKGDVQMNPRQMQQALGKMSRALPPQLLQQL 480
Query: 468 GGVGGLQNLMK 478
GGVGGLQ+LMK
Sbjct: 481 GGVGGLQSLMK 491
>gi|45360609|ref|NP_988977.1| signal recognition particle 54kDa [Xenopus (Silurana) tropicalis]
gi|38174419|gb|AAH61368.1| signal recognition particle 54 [Xenopus (Silurana) tropicalis]
Length = 504
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 292/504 (57%), Positives = 388/504 (76%), Gaps = 17/504 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ +ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCKALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVNIAYEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN +++IVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIVIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF +
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELD+++ KL + R+ R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDNTDGAKLFSKQPGRVQRVARGSGVSTRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L+ +GG
Sbjct: 420 LLAQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLQHMGG 476
Query: 470 VGGLQNLMKQM--GSTKDMMGMFG 491
+ GLQ++M+Q G+ +M GM G
Sbjct: 477 MAGLQSMMRQFQQGAAGNMKGMMG 500
>gi|320167917|gb|EFW44816.1| signal recognition particle containing protein [Capsaspora
owczarzaki ATCC 30864]
Length = 512
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 294/489 (60%), Positives = 382/489 (78%), Gaps = 9/489 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ M+ + +IDE+VL+ L EI ALL+ADV KLV +++T++K V
Sbjct: 1 MVLADLGRKITGALRNMTASAVIDEEVLDAMLKEICTALLEADVNVKLVMKLRTSVKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N D++AAG NK+R+IQ+A+++ELC+++DPG + P KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 NFDEMAAGLNKKRVIQKAVYDELCRLVDPGIAPYKPVKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+ KKGWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA EGVE FK
Sbjct: 121 LAYYYHKKGWKTCLVCADTFRAGAFDQLKQNATKARIPFYGSYTEADPVLIAEEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQEA+LFEEM Q+S+A +P VIFV+D++IGQAA QAQAFK +V
Sbjct: 181 KEGFEIIIVDTSGRHKQEASLFEEMLQISKAVDPQNVIFVLDATIGQAALGQAQAFKATV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEHM++FE F+ K F+ +LLGMGD
Sbjct: 241 DVGSVIMTKLDGHAKGGGALSAVAATQSPIIFIGTGEHMEDFERFETKAFIGKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G M+ + + + +D ELL KL G F+LR MYEQFQNI+KMGP G++ M+PGF SEL
Sbjct: 301 GGLMEVVQD-LKLDNNKELLTKLQAGVFSLRDMYEQFQNIMKMGPFGKIMGMIPGFDSEL 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
+ KG E+ES ++KR MT+MDSMT+ ELDS +R MR+ARG+G REV ++L
Sbjct: 360 ITKGSEQESMRRLKRCMTIMDSMTDTELDSDGKIFTTQPNRCMRVARGAGAHPREVADLL 419
Query: 420 EEYKRLAKIWSKMKGLK-IPKKGEMS-----ALSRNMNAQHMSKVLPQGMLKQIGGVGGL 473
+YK+ A + +M G+K + K G+MS A + +NAQ M+K++ +LKQ+GG+GG+
Sbjct: 420 AQYKKFAAMVKQMGGMKGLFKGGDMSRNVNPAQMQQLNAQ-MAKMMDPRVLKQMGGMGGI 478
Query: 474 QNLMKQMGS 482
QN+MKQ S
Sbjct: 479 QNMMKQFTS 487
>gi|346465765|gb|AEO32727.1| hypothetical protein [Amblyomma maculatum]
Length = 518
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 296/505 (58%), Positives = 386/505 (76%), Gaps = 20/505 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+++VL+ L EI ALL+AD+ KLV++++ N++ ++
Sbjct: 16 MVLADLGRKITNALRSLSNATIINKEVLDSMLKEICTALLEADINIKLVKQLRENVRSVI 75
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++D++AAG NKRR+IQ A+F EL K++DPG ++ P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 76 DIDEMAAGLNKRRMIQSAVFKELIKLVDPGVKAWQPAKGKNNVIMFVGLQGSGKTTTCTK 135
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KKGWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 136 LAYHYLKKGWKTCLVCADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVVIAQEGVEKFK 195
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E ++I+VDTSGRHKQE +LFEEM QVS ATNPD +IFVMD+SIGQA QA+AFK+ V
Sbjct: 196 SEGFEIIVVDTSGRHKQEDSLFEEMLQVSNATNPDNIIFVMDASIGQACEAQARAFKEKV 255
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VGAVIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPF+S+LLGMGD
Sbjct: 256 DVGAVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKVKPFISKLLGMGDI 315
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D EL++KL G FTLR MYEQFQNI+KMGP Q+ M+PGFSS+
Sbjct: 316 EGLIDKVNE-LKLDDNEELIEKLKHGEFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSSDF 374
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVME 417
M KG E+ES ++K+ MT+MDSM ++ELD KL + R+ R+ARG+G REV E
Sbjct: 375 MTKGNEQESMGRLKKLMTIMDSMNDQELDHREGAKLFSRQTGRVTRVARGAGVTTREVQE 434
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
+L +Y + A + KM G+K + K G+M ++N+N Q M+K++ +L Q+GG
Sbjct: 435 LLAQYTKFAAMVKKMGGIKGLFKGGDM---AKNVNQAQMNKLNQQMAKMMDPRVLHQMGG 491
Query: 470 VGGLQNLMKQM-----GSTKDMMGM 489
GLQN+M+Q+ G+ ++M M
Sbjct: 492 FSGLQNMMRQLQGAASGNVNNLMNM 516
>gi|156407984|ref|XP_001641637.1| predicted protein [Nematostella vectensis]
gi|156228776|gb|EDO49574.1| predicted protein [Nematostella vectensis]
Length = 498
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 291/490 (59%), Positives = 383/490 (78%), Gaps = 15/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L E+ ALL++DV +LV+ ++ N+K +
Sbjct: 1 MVLADLGRKITTALRSLSNATVINEEVLNAMLKEVCAALLESDVNVQLVKRLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +++AAG NKR++IQ +F ELCK++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DFEEMAAGLNKRKMIQHTVFQELCKLVDPGVKAWTPSKGKKNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTETDPVIIAQEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+EN ++IIVDTSGRHKQE +LFEEM QVS A +PD +IFVMD++IGQA Q++AFK+ V
Sbjct: 181 EENFEIIIVDTSGRHKQEESLFEEMLQVSNAVSPDNIIFVMDATIGQACESQSRAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEQFKTRPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + ++ EL+ KL G F+LR MYEQFQNI+KMGP GQ+ M+PGFSS+
Sbjct: 301 EGLIDKVNE-LKLEDNEELIDKLKHGVFSLRDMYEQFQNIMKMGPFGQIMGMIPGFSSDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
+ KG E+ES A++KR MT+MDSM ++ELDS N KL R R+ARGSG VREV E
Sbjct: 360 LSKGNEQESMARLKRLMTIMDSMNDQELDSPNGAKLFTRQPGRTTRVARGSGVSVREVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQ-------GMLKQIGG 469
+L +Y++ A++ KM G+K + K G+M +RN+N M+K+ Q +L+Q+GG
Sbjct: 420 LLSQYQKFAQMVKKMGGIKGLFKGGDM---TRNVNPTQMTKLNHQMAKMMDPRVLQQMGG 476
Query: 470 VGGLQNLMKQ 479
+ GLQN+M+Q
Sbjct: 477 MSGLQNMMRQ 486
>gi|348539542|ref|XP_003457248.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Oreochromis niloticus]
Length = 504
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 294/504 (58%), Positives = 387/504 (76%), Gaps = 17/504 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 AENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACESQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +D+++E + +D EL+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGF ++
Sbjct: 301 EGLIDRVNE-LKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS + KL + +RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDSKDGAKLFSKQPNRIQRVARGSGVATRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +GG
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLHHMGG 476
Query: 470 VGGLQNLMKQM--GSTKDMMGMFG 491
+ GLQ++M+Q G+ +M GM G
Sbjct: 477 MAGLQSMMRQFQQGAAGNMKGMMG 500
>gi|440804234|gb|ELR25111.1| signal peptide binding domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 496
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 290/478 (60%), Positives = 374/478 (78%), Gaps = 5/478 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ MSN+T+ID+ V++ L EI+ AL+ ADVQF LV +++ NI V
Sbjct: 1 MVLAELGSKITHALRNMSNSTVIDKDVVDAMLKEISNALMAADVQFNLVLKLRKNILDKV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++D+AAG NKR+IIQQA+F+ELC ++DPG+ + KGKP+VIMFVGLQG+GKTTT TK
Sbjct: 61 KIEDMAAGLNKRKIIQQAVFDELCALVDPGQKPYKLVKGKPNVIMFVGLQGAGKTTTVTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++++K WK LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV++A EGVE FK
Sbjct: 121 LAYHYKRKSWKACLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVKVAEEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQEAALFEEM QV+ A PD V FVMD +IGQAAFDQAQAFKQ V
Sbjct: 181 QEGYEIIIVDTSGRHKQEAALFEEMEQVAAAIKPDTVTFVMDGTIGQAAFDQAQAFKQKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++I+TK+DGHAKGGGALSAVAAT SP+ FIGTGEH+D+FE F V+PFVS++LGMGD
Sbjct: 241 GIGSIIMTKLDGHAKGGGALSAVAATGSPITFIGTGEHIDDFETFAVRPFVSKMLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G +D I + VP+D QPEL ++LSEG FTLR MYEQF NILKMGP+ +V MLPG S +
Sbjct: 301 AGLVDTIKKAVPLDGQPELYKRLSEGIFTLRDMYEQFSNILKMGPLNKVMEMLPGMGS-I 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ +G ++S KIK YMT+MDSMT+E DS + SRI+RIARGSGR V+EV E+LE
Sbjct: 360 LKEGAGRDSSQKIKSYMTIMDSMTDELDDSKVLAKNSQSRIVRIARGSGRSVKEVNELLE 419
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMK 478
++K K+ K+K + RN++ MS ++P ++KQ+GG+G +QN+M+
Sbjct: 420 QFKHFEKVMKKVK--GLKLGKGGELKGRNLS--QMSNLIPPHVMKQMGGMGAIQNMMR 473
>gi|41055859|ref|NP_957282.1| signal recognition particle 54 kDa protein [Danio rerio]
gi|28277732|gb|AAH45474.1| Signal recognition particle 54 [Danio rerio]
gi|45709065|gb|AAH67588.1| Signal recognition particle 54 [Danio rerio]
gi|182891276|gb|AAI64217.1| Srp54 protein [Danio rerio]
Length = 504
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 295/504 (58%), Positives = 386/504 (76%), Gaps = 17/504 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYFQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 SENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D EL+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELD+ + KL + +RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKQPNRIQRVARGSGVATRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +GG
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLHHMGG 476
Query: 470 VGGLQNLMKQM--GSTKDMMGMFG 491
+ GLQ++M+Q G+ +M GM G
Sbjct: 477 MAGLQSMMRQFQQGAAGNMKGMMG 500
>gi|148223543|ref|NP_001080564.1| signal recognition particle 54kDa [Xenopus laevis]
gi|27924197|gb|AAH44991.1| Srp54 protein [Xenopus laevis]
Length = 504
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 293/504 (58%), Positives = 384/504 (76%), Gaps = 20/504 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DLEEMASGLNKRKMIQTAVFKELVKLVDPGVKAWTPTKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVNIAYEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN +++IVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIVIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ++ KL G FTLR MYEQFQNI+KMGP Q+ M+PGF +
Sbjct: 301 EGLIDKVNE-LNLDDNEAMIDKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM + ELD+++ K+ R+ R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDLELDNTDGAKVFTKQPGRVQRVARGSGASARDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L+ +GG
Sbjct: 420 LLAQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLQHMGG 476
Query: 470 VGGLQNLMKQM-----GSTKDMMG 488
+ GLQ++MKQ GSTK MMG
Sbjct: 477 MAGLQSMMKQFQQGAAGSTKGMMG 500
>gi|126283547|ref|XP_001363021.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Monodelphis domestica]
gi|334324872|ref|XP_003340575.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Monodelphis domestica]
Length = 504
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 292/501 (58%), Positives = 388/501 (77%), Gaps = 11/501 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGKP+VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKPNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVGG 472
+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+ G
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAG 479
Query: 473 LQNLMKQM--GSTKDMMGMFG 491
LQ++M+Q G+ +M GM G
Sbjct: 480 LQSMMRQFQQGAAGNMKGMMG 500
>gi|387916030|gb|AFK11624.1| signal recognition particle protein [Callorhinchus milii]
Length = 504
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 294/504 (58%), Positives = 384/504 (76%), Gaps = 17/504 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYFQRKGWKSCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVMIAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN ++IIVDTSGRHKQE +LFEEM QVS + PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 KENFEIIIVDTSGRHKQEDSLFEEMLQVSNSIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D EL+ KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELD+ + KL + RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKQPGRIQRVARGSGVTTRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +GG
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLHHMGG 476
Query: 470 VGGLQNLMKQM--GSTKDMMGMFG 491
+ GLQ +M+Q G+ +M GM G
Sbjct: 477 MAGLQTMMRQFQQGAAGNMKGMMG 500
>gi|302815721|ref|XP_002989541.1| hypothetical protein SELMODRAFT_129975 [Selaginella moellendorffii]
gi|300142719|gb|EFJ09417.1| hypothetical protein SELMODRAFT_129975 [Selaginella moellendorffii]
Length = 467
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 292/480 (60%), Positives = 375/480 (78%), Gaps = 15/480 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG IS AIQ+++ AT+ID+K L C+NEIT ALLQADVQFKLV+ + +N++K V
Sbjct: 1 MVLGELGSRISGAIQRLNTATVIDDKALTICVNEITHALLQADVQFKLVQALSSNVRKSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LAAGH+KR IIQ+A+F+EL MLD GKPSFTP KG+ + +M VGLQG GKTTTCTK
Sbjct: 61 --EKLAAGHDKRHIIQKAVFHELHAMLDAGKPSFTPTKGRTNAVMLVGLQGCGKTTTCTK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA +++KKG+ PALVCADTFRAGAFDQLKQNATK KIPFYGSYTE+DPV IA EGV F
Sbjct: 119 YALHYRKKGFNPALVCADTFRAGAFDQLKQNATKVKIPFYGSYTETDPVVIAQEGVRKFA 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
DLII+DTSGRHKQE ALFEEMRQ++ ATNPDL+IFVMDSSIGQAA DQA AF++S
Sbjct: 179 DTKHDLIILDTSGRHKQENALFEEMRQLAAATNPDLIIFVMDSSIGQAANDQALAFRESA 238
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VGAVI+TK+DGHAKGGGALSAVAATKSP+IF+GTGE D+FE F+ K FVSRLLGMGD
Sbjct: 239 KVGAVIITKIDGHAKGGGALSAVAATKSPIIFLGTGEKADDFETFESKAFVSRLLGMGDL 298
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+GF +KI EVVP + QPEL+QKL++GN + + + +Q +NI MG + Q+ SM+PGF++
Sbjct: 299 AGFANKIKEVVPSELQPELVQKLADGNISFKFLCDQIENITSMGSLSQLMSMIPGFNNVN 358
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ + + ++Y ++DSMTNEE +SS+ +++SRI+R+A+GSG V V +M+
Sbjct: 359 V----QSFDIQQFRKYRVILDSMTNEERNSSS---LSESRILRLAKGSGTSVDNVQQMMN 411
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
K ++K +MKGLK+ KKG+ L + + Q +SK+LP ++KQ GG+GGLQ LMKQ+
Sbjct: 412 HVKTMSK---QMKGLKLNKKGD---LGKGKSMQDLSKMLPANIVKQFGGMGGLQTLMKQL 465
>gi|427783877|gb|JAA57390.1| Putative signal recognition particle subunit srp54 [Rhipicephalus
pulchellus]
Length = 503
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 294/505 (58%), Positives = 384/505 (76%), Gaps = 20/505 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+++VL+ L EI ALL+AD+ KLV++++ N++ ++
Sbjct: 1 MVLADLGRKITNALRSLSNATIINKEVLDSMLKEICTALLEADINIKLVKQLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++D++AAG NKRR+IQ A+F EL +++DPG ++ P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DIDEMAAGLNKRRMIQSAVFKELIRLVDPGVKAWQPTKGKNNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KKGWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYHYLKKGWKTCLVCADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVVIAQEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E ++I+VDTSGRHKQE +LFEEM QVS AT PD +IFVMD+SIGQA QA+AFK+ V
Sbjct: 181 NEGFEIIVVDTSGRHKQEDSLFEEMLQVSNATKPDNIIFVMDASIGQACESQARAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VGAVIVTK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F VKPF+S+LLGMGD
Sbjct: 241 DVGAVIVTKLDGHAKGGGALSAVAATHSPIIFIGTGEHIDDFEPFKVKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D EL++KL G FTLR MYEQFQNI+KMGP Q+ M+PGFSS+
Sbjct: 301 EGLIDKVNE-LKLDDNEELIEKLKHGEFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSSDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVME 417
M KG E+ES ++K+ MT+MDSM ++ELD KL + R+ R+ARG+G REV E
Sbjct: 360 MTKGNEQESMGRLKKLMTIMDSMNDQELDHREGAKLFSRQTGRVTRVARGAGVTSREVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
+L +Y + A + KM G+K + K G+M ++N+N Q M+K++ +L Q+GG
Sbjct: 420 LLAQYTKFAAMVKKMGGIKGLFKGGDM---AKNVNQAQMNKLNQQMAKMMDPRVLHQMGG 476
Query: 470 VGGLQNLMKQM-----GSTKDMMGM 489
GLQN+M+Q+ G+ ++M M
Sbjct: 477 FSGLQNMMRQLQGAASGNVNNLMNM 501
>gi|302761692|ref|XP_002964268.1| hypothetical protein SELMODRAFT_82182 [Selaginella moellendorffii]
gi|300167997|gb|EFJ34601.1| hypothetical protein SELMODRAFT_82182 [Selaginella moellendorffii]
Length = 467
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 293/480 (61%), Positives = 374/480 (77%), Gaps = 15/480 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG IS AIQ+++ AT+ID+K L C+NEIT ALLQADVQFKLV+ + +N++K V
Sbjct: 1 MVLGELGSRISGAIQRLNTATVIDDKALTICVNEITHALLQADVQFKLVQALSSNVRKSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LAAGH+KR IIQ+A+F+EL MLD GKPSFTP KG+ +V+M VGLQG GKTTTCTK
Sbjct: 61 --EKLAAGHDKRHIIQKAVFHELRAMLDAGKPSFTPTKGRTNVVMLVGLQGCGKTTTCTK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA +++KKG+ PALVCADTFRAGAFDQLKQNATK KIPFYGSYTE+DPV IA EGV F
Sbjct: 119 YALHYRKKGFNPALVCADTFRAGAFDQLKQNATKVKIPFYGSYTETDPVVIAQEGVRKFA 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
DLII+DTSGRHKQE ALFEEMRQ++ ATNPDL+IFVMDSSIGQAA DQA AF++S
Sbjct: 179 DAKHDLIILDTSGRHKQENALFEEMRQLAAATNPDLIIFVMDSSIGQAANDQALAFRESA 238
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VGAVI+TK+DGHAKGGGALSAVAATKSP+IF+GTGE D FE F+ K FVSRLLGMGD
Sbjct: 239 KVGAVIITKIDGHAKGGGALSAVAATKSPIIFLGTGEKADAFETFESKAFVSRLLGMGDI 298
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+GF +KI EVVP + QPEL+QKL++GN + + + +Q +NI MG + Q+ SM+PGF++
Sbjct: 299 AGFANKIKEVVPSELQPELVQKLADGNISFKFLCDQIENITSMGSLSQLMSMIPGFNN-- 356
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ + ++Y ++DSMTNEE +SS+ +++SRI+R+A+GSG V V +M+
Sbjct: 357 --INVQSFDIQQFRKYRVILDSMTNEERNSSS---LSESRILRLAKGSGTSVDNVQQMVN 411
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
K ++K +MKGLK+ KKG+ L + + Q +SK+LP ++KQ GG+GGLQ LMKQ+
Sbjct: 412 HVKTMSK---QMKGLKLNKKGD---LGKGKSMQDLSKMLPANIVKQFGGMGGLQTLMKQL 465
>gi|332024403|gb|EGI64601.1| Signal recognition particle 54 kDa protein [Acromyrmex echinatior]
Length = 506
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 291/508 (57%), Positives = 388/508 (76%), Gaps = 20/508 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++K++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRKVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG ++ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGINKRRMIQSAVFKELVKLIDPGVKAYQPVKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAVQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G FTLR MYEQFQNI+KMGP Q+ +M+PGFS +
Sbjct: 301 EGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQLMNMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++KR MT+MDSM + ELDS + KL + RIMR+ARGSG +EV +
Sbjct: 360 MSKGTEQESMARLKRLMTIMDSMNDSELDSRDGAKLFSKQPGRIMRVARGSGVTEKEVKD 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQ-------GMLKQIGG 469
++ +Y + A + KM G+K + K G+M ++N+N M+K+ Q +L Q+GG
Sbjct: 420 LITQYTKFAAVVKKMGGIKGLFKAGDM---AKNVNPTQMAKLNHQMAKMMDPRVLHQMGG 476
Query: 470 VGGLQNLMKQM-----GSTKDMMGMFGG 492
+ GLQN+MKQ+ G ++MG FGG
Sbjct: 477 MPGLQNIMKQLQQGAAGGLGNLMGGFGG 504
>gi|410898714|ref|XP_003962842.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
1 [Takifugu rubripes]
Length = 504
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 291/502 (57%), Positives = 386/502 (76%), Gaps = 17/502 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIATEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 MENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACESQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +D++++ + +D EL+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGF ++
Sbjct: 301 EGLIDRVND-LKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS + KL + +RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDSKDGAKLFSKQPNRIQRVARGSGVATRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +GG
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLHHMGG 476
Query: 470 VGGLQNLMKQM--GSTKDMMGM 489
+ GLQ++M+Q G+ +M GM
Sbjct: 477 MAGLQSMMRQFQQGAAGNMKGM 498
>gi|31981338|ref|NP_036029.2| signal recognition particle 54 kDa protein [Mus musculus]
gi|153791789|ref|NP_001093579.1| signal recognition particle 54 kDa protein [Mus musculus]
gi|73622264|sp|P14576.2|SRP54_MOUSE RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|12848354|dbj|BAB27921.1| unnamed protein product [Mus musculus]
gi|18043829|gb|AAH19683.1| Signal recognition particle 54a [Mus musculus]
gi|74193669|dbj|BAE22786.1| unnamed protein product [Mus musculus]
Length = 504
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 292/501 (58%), Positives = 387/501 (77%), Gaps = 11/501 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVGG 472
+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+ G
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAG 479
Query: 473 LQNLMKQM--GSTKDMMGMFG 491
LQ++M+Q G+ +M GM G
Sbjct: 480 LQSMMRQFQQGAAGNMKGMMG 500
>gi|209153928|gb|ACI33196.1| Signal recognition particle 54 kDa protein [Salmo salar]
Length = 504
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 292/504 (57%), Positives = 385/504 (76%), Gaps = 17/504 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ ++F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHSVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NESFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+ E F +PF+S+LLGMGD
Sbjct: 241 EVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDLEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D EL+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELD+ + KL +RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFTKQPNRIARVARGSGVATRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +GG
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLHHMGG 476
Query: 470 VGGLQNLMKQM--GSTKDMMGMFG 491
+ GLQ++M+Q G+ +M GM G
Sbjct: 477 MAGLQSMMRQFQQGAAGNMKGMMG 500
>gi|4507215|ref|NP_003127.1| signal recognition particle 54 kDa protein isoform 1 [Homo sapiens]
gi|50979080|ref|NP_001003272.1| signal recognition particle 54 kDa protein [Canis lupus familiaris]
gi|84000369|ref|NP_001033290.1| signal recognition particle 54 kDa protein [Bos taurus]
gi|197103004|ref|NP_001126912.1| signal recognition particle 54 kDa protein [Pongo abelii]
gi|386780792|ref|NP_001247781.1| signal recognition particle 54 kDa protein [Macaca mulatta]
gi|114652592|ref|XP_001136048.1| PREDICTED: signal recognition particle 54 kDa protein isoform 5
[Pan troglodytes]
gi|149410337|ref|XP_001511597.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
1 [Ornithorhynchus anatinus]
gi|149692831|ref|XP_001491075.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Equus caballus]
gi|296214799|ref|XP_002753859.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Callithrix jacchus]
gi|301774887|ref|XP_002922872.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Ailuropoda melanoleuca]
gi|332229141|ref|XP_003263750.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Nomascus leucogenys]
gi|335292471|ref|XP_001927834.3| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Sus scrofa]
gi|344274150|ref|XP_003408881.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
1 [Loxodonta africana]
gi|395838229|ref|XP_003792021.1| PREDICTED: signal recognition particle 54 kDa protein [Otolemur
garnettii]
gi|397501115|ref|XP_003821240.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Pan paniscus]
gi|402875937|ref|XP_003901747.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Papio anubis]
gi|410048161|ref|XP_003952519.1| PREDICTED: signal recognition particle 54 kDa protein [Pan
troglodytes]
gi|426248376|ref|XP_004017939.1| PREDICTED: signal recognition particle 54 kDa protein [Ovis aries]
gi|46577649|sp|P61010.1|SRP54_CANFA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|46577650|sp|P61011.1|SRP54_HUMAN RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|68731680|sp|Q5R4R6.1|SRP54_PONAB RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|73621949|sp|Q4R965.1|SRP54_MACFA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|122142857|sp|Q2T9U1.1|SRP54_BOVIN RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|119390387|pdb|2J37|W Chain W, Model Of Mammalian Srp Bound To 80s Rncs
gi|930|emb|CAA34385.1| unnamed protein product [Canis lupus familiaris]
gi|784999|emb|CAA60132.1| SRP 54 [Homo sapiens]
gi|1256820|gb|AAC50994.1| signal recognition particle [Homo sapiens]
gi|12653733|gb|AAH00652.1| Signal recognition particle 54kDa [Homo sapiens]
gi|13097267|gb|AAH03389.1| Signal recognition particle 54kDa [Homo sapiens]
gi|55733132|emb|CAH93250.1| hypothetical protein [Pongo abelii]
gi|67967747|dbj|BAE00356.1| unnamed protein product [Macaca fascicularis]
gi|83405301|gb|AAI11271.1| Signal recognition particle 54kDa [Bos taurus]
gi|90076082|dbj|BAE87721.1| unnamed protein product [Macaca fascicularis]
gi|90076300|dbj|BAE87830.1| unnamed protein product [Macaca fascicularis]
gi|177771971|gb|ACB73260.1| signal recognition particle (predicted) [Rhinolophus ferrumequinum]
gi|189053540|dbj|BAG35706.1| unnamed protein product [Homo sapiens]
gi|296475353|tpg|DAA17468.1| TPA: signal recognition particle 54 kDa protein [Bos taurus]
gi|325464281|gb|ADZ15911.1| signal recognition particle 54kDa [synthetic construct]
gi|351700055|gb|EHB02974.1| Signal recognition particle 54 kDa protein [Heterocephalus glaber]
gi|355693216|gb|EHH27819.1| hypothetical protein EGK_18109 [Macaca mulatta]
gi|355778517|gb|EHH63553.1| hypothetical protein EGM_16545 [Macaca fascicularis]
gi|380815890|gb|AFE79819.1| signal recognition particle 54 kDa protein isoform 1 [Macaca
mulatta]
gi|383421049|gb|AFH33738.1| signal recognition particle 54 kDa protein isoform 1 [Macaca
mulatta]
gi|384948994|gb|AFI38102.1| signal recognition particle 54 kDa protein isoform 1 [Macaca
mulatta]
gi|410210342|gb|JAA02390.1| signal recognition particle 54kDa [Pan troglodytes]
gi|410264744|gb|JAA20338.1| signal recognition particle 54kDa [Pan troglodytes]
gi|410294232|gb|JAA25716.1| signal recognition particle 54kDa [Pan troglodytes]
gi|410353847|gb|JAA43527.1| signal recognition particle 54kDa [Pan troglodytes]
gi|417402010|gb|JAA47866.1| Putative signal recognition particle subunit srp54 [Desmodus
rotundus]
gi|440909283|gb|ELR59207.1| Signal recognition particle 54 kDa protein [Bos grunniens mutus]
gi|226429|prf||1512310A SRP protein 54kD
Length = 504
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 291/501 (58%), Positives = 387/501 (77%), Gaps = 11/501 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVGG 472
+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+ G
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAG 479
Query: 473 LQNLMKQM--GSTKDMMGMFG 491
LQ++M+Q G+ +M GM G
Sbjct: 480 LQSMMRQFQQGAAGNMKGMMG 500
>gi|291403728|ref|XP_002718183.1| PREDICTED: signal recognition particle 54kDa isoform 1 [Oryctolagus
cuniculus]
Length = 504
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 290/503 (57%), Positives = 384/503 (76%), Gaps = 15/503 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGGV 470
+L +Y + A++ KM G+K KG+ +S N+N Q M+K++ +L +GG+
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGK--KISENVNQSPDAKLNQQMAKMMDPRVLHHMGGM 477
Query: 471 GGLQNLMKQM--GSTKDMMGMFG 491
GLQ++M+Q G+ +M GM G
Sbjct: 478 AGLQSMMRQFQQGAAGNMKGMMG 500
>gi|197631999|gb|ACH70723.1| signal recognition particle 54 [Salmo salar]
gi|209154348|gb|ACI33406.1| Signal recognition particle 54 kDa protein [Salmo salar]
Length = 504
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 292/504 (57%), Positives = 385/504 (76%), Gaps = 20/504 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKSSI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ ++F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHSVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NESFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+ E F +PF+S+LLGMGD
Sbjct: 241 EVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDLEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D EL+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELD+ + KL + +RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKGPNRIARVARGSGVATRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +GG
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLHHMGG 476
Query: 470 VGGLQNLMKQM-----GSTKDMMG 488
+ GLQ++M+Q G+ K MMG
Sbjct: 477 MSGLQSMMRQFQQGAAGNAKGMMG 500
>gi|62899020|ref|NP_446323.1| signal recognition particle 54 kDa protein [Rattus norvegicus]
gi|73621950|sp|Q6AYB5.1|SRP54_RAT RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|50925703|gb|AAH79117.1| Signal recognition particle 54a [Rattus norvegicus]
Length = 504
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 291/501 (58%), Positives = 387/501 (77%), Gaps = 11/501 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYFYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVGG 472
+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+ G
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAG 479
Query: 473 LQNLMKQM--GSTKDMMGMFG 491
LQ++M+Q G+ +M GM G
Sbjct: 480 LQSMMRQFQQGAAGNMKGMMG 500
>gi|410962043|ref|XP_003987586.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Felis catus]
Length = 504
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 290/501 (57%), Positives = 387/501 (77%), Gaps = 11/501 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVGG 472
+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+ G
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAG 479
Query: 473 LQNLMKQM--GSTKDMMGMFG 491
LQ++M+Q G+ +M GM G
Sbjct: 480 LQSMMRQFQQGAAGNMKGMMG 500
>gi|410962045|ref|XP_003987587.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Felis catus]
Length = 526
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 290/501 (57%), Positives = 387/501 (77%), Gaps = 11/501 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 23 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 82
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 83 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 142
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 143 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVDKFK 202
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 203 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 262
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 263 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 322
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 323 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 381
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E
Sbjct: 382 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQE 441
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVGG 472
+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+ G
Sbjct: 442 LLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAG 501
Query: 473 LQNLMKQM--GSTKDMMGMFG 491
LQ++M+Q G+ +M GM G
Sbjct: 502 LQSMMRQFQQGAAGNMKGMMG 522
>gi|54194|emb|CAA34386.1| unnamed protein product [Mus musculus]
Length = 504
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 291/501 (58%), Positives = 386/501 (77%), Gaps = 11/501 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEE QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEERLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVGG 472
+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+ G
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAG 479
Query: 473 LQNLMKQM--GSTKDMMGMFG 491
LQ++M+Q G+ +M GM G
Sbjct: 480 LQSMMRQFQQGAAGNMKGMMG 500
>gi|355721868|gb|AES07403.1| signal recognition particle 54kDa [Mustela putorius furo]
Length = 502
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 290/500 (58%), Positives = 386/500 (77%), Gaps = 11/500 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
VLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K ++
Sbjct: 1 VLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAID 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 LEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 AYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKN 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 ENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVD 240
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 VASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIE 300
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++ M
Sbjct: 301 GLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFM 359
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVMEM 418
KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E+
Sbjct: 360 SKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQEL 419
Query: 419 LEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVGGL 473
L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+ GL
Sbjct: 420 LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAGL 479
Query: 474 QNLMKQM--GSTKDMMGMFG 491
Q++M+Q G+ +M GM G
Sbjct: 480 QSMMRQFQQGAAGNMKGMMG 499
>gi|153791464|ref|NP_001093580.1| signal recognition particle 54C [Mus musculus]
Length = 504
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 289/501 (57%), Positives = 385/501 (76%), Gaps = 11/501 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++K G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNKALIEKWKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ + + RI R+ARGSG R++ E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKHPGRIQRVARGSGVSTRDIQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVGG 472
+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+ G
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAG 479
Query: 473 LQNLMKQM--GSTKDMMGMFG 491
LQ++M+Q G+ +M GM G
Sbjct: 480 LQSMMRQFQQGAAGNMKGMMG 500
>gi|242038763|ref|XP_002466776.1| hypothetical protein SORBIDRAFT_01g014030 [Sorghum bicolor]
gi|241920630|gb|EER93774.1| hypothetical protein SORBIDRAFT_01g014030 [Sorghum bicolor]
Length = 476
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 311/488 (63%), Positives = 386/488 (79%), Gaps = 20/488 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+QL GS+ A+ +M NAT++D+KVL++CLNEI+RALLQADV+F+ VR +Q IK V
Sbjct: 1 MVLSQLSGSLKGALSRMCNATLVDQKVLDDCLNEISRALLQADVRFETVRRVQATIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKG-KP-SVIMFVGLQGSGKTTTC 118
NL LA G NKRR+I +A+ EL + LDPGKPSF P KG KP SV+MFVGLQGSGKTTTC
Sbjct: 61 NLQALADGTNKRRVIHRAVVAELRRTLDPGKPSFAPTKGRKPASVVMFVGLQGSGKTTTC 120
Query: 119 TKYAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
KYA YH++ KG PALVCADTFRAGAFDQLKQNATKA IPFYGS+TESDPV++AVEGV+
Sbjct: 121 VKYADYHRRHKGLSPALVCADTFRAGAFDQLKQNATKAGIPFYGSHTESDPVKVAVEGVD 180
Query: 178 TFKKEN-CDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
F+ E+ CDLI+VDTSGRH+QEAAL EEMRQV++AT PDLV+FVMD+SIGQAAF QAQAF
Sbjct: 181 RFRDEDACDLIVVDTSGRHRQEAALLEEMRQVADATRPDLVVFVMDASIGQAAFQQAQAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
+QS VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+ + E FD K FVSRLLG
Sbjct: 241 RQSTPVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHIPDLEAFDAKSFVSRLLG 300
Query: 297 MGDWSGFMDKIHEVVPMDQQP--ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+GD SG MDK+H + D + ++L++L++ NFTLR + + F+ +L MGP+GQ+ SM+P
Sbjct: 301 LGDLSGLMDKMHGIPAYDNRSPYQILEELTKENFTLRALRKLFRAMLSMGPLGQLVSMIP 360
Query: 355 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
G S+ + EKE AK+KRYMTMMDSMT+ ELD ++ KLMN SRI R+ARGSGR VR+
Sbjct: 361 GLISD---RFSEKEGHAKMKRYMTMMDSMTDAELDGTSTKLMNQSRIKRVARGSGRPVRD 417
Query: 415 VMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQ 474
V++MLEE+KR+AK+ SK+ +K P + + +PQ +L Q GG GLQ
Sbjct: 418 VVDMLEEHKRMAKMMSKLPNVKRPN-----------DINTLVNAIPQPLLNQFGGKFGLQ 466
Query: 475 NLMKQMGS 482
+L++QMG+
Sbjct: 467 SLIRQMGA 474
>gi|50748422|ref|XP_421238.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Gallus gallus]
gi|224051427|ref|XP_002200552.1| PREDICTED: signal recognition particle 54 kDa protein [Taeniopygia
guttata]
Length = 504
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 288/504 (57%), Positives = 386/504 (76%), Gaps = 17/504 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK ++IMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK L+CADT+RAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +GG
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQLAKLNQQMAKMMDPRVLHHMGG 476
Query: 470 VGGLQNLMKQM--GSTKDMMGMFG 491
+ GLQ++M+Q G+ +M GM G
Sbjct: 477 MAGLQSMMRQFQQGAAGNMKGMMG 500
>gi|348572227|ref|XP_003471895.1| PREDICTED: LOW QUALITY PROTEIN: signal recognition particle 54 kDa
protein-like [Cavia porcellus]
Length = 504
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 290/501 (57%), Positives = 386/501 (77%), Gaps = 11/501 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NK ++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKXKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVGG 472
+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+ G
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAG 479
Query: 473 LQNLMKQM--GSTKDMMGMFG 491
LQ++M+Q G+ +M GM G
Sbjct: 480 LQSMMRQFQQGAAGNMKGMMG 500
>gi|307183983|gb|EFN70554.1| Signal recognition particle 54 kDa protein [Camponotus floridanus]
Length = 506
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 289/508 (56%), Positives = 387/508 (76%), Gaps = 20/508 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N+++++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRQVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +D+A G NKRR+IQ A+F EL K++DPG ++ P KG+P+VIMFVGLQGSGKTT+CTK
Sbjct: 61 DFEDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPVKGRPNVIMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVAIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAVQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G FTLR MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 301 EGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQLMGMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++KR MT+MDSM + ELDS + KL + RIMR+ARGSG +EV +
Sbjct: 360 MSKGTEQESMARLKRLMTIMDSMNDSELDSRDGAKLFSKQPGRIMRVARGSGVTEKEVKD 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQ-------GMLKQIGG 469
++ +Y + A + KM G+K + K G+M ++N+N M+K+ Q +L Q+GG
Sbjct: 420 LITQYTKFAAVVKKMGGIKGLFKAGDM---AKNVNPTQMAKLNHQMAKMMDPRVLHQMGG 476
Query: 470 VGGLQNLMKQM-----GSTKDMMGMFGG 492
+ GLQN+MKQ+ G ++MG FGG
Sbjct: 477 MPGLQNIMKQLQQGAAGGLGNLMGGFGG 504
>gi|343960623|dbj|BAK61901.1| signal recognition particle 54 kDa protein [Pan troglodytes]
Length = 504
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 290/501 (57%), Positives = 386/501 (77%), Gaps = 11/501 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LASYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDNNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVGG 472
+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+ G
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAG 479
Query: 473 LQNLMKQM--GSTKDMMGMFG 491
LQ++M+Q G+ +M GM G
Sbjct: 480 LQSMMRQFQQGAAGNMKGMMG 500
>gi|307199091|gb|EFN79801.1| Signal recognition particle 54 kDa protein [Harpegnathos saltator]
Length = 506
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 289/508 (56%), Positives = 387/508 (76%), Gaps = 20/508 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N+++++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRQVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +D+A G NKRR+IQ A+F EL K++DPG ++ P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFEDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPVKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAVQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G FTLR MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 301 EGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQLMGMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++KR MT+MDSM + ELDS + KL + RI+R+ARGSG +EV +
Sbjct: 360 MSKGTEQESMARLKRLMTIMDSMNDSELDSRDGAKLFSKQPGRIVRVARGSGVTEKEVKD 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQ-------GMLKQIGG 469
++ +Y + A + KM G+K + K G+M ++N+N M+K+ Q +L Q+GG
Sbjct: 420 LITQYTKFAAVVKKMGGIKGLFKAGDM---AKNVNPTQMAKLNHQMAKMMDPRVLHQMGG 476
Query: 470 VGGLQNLMKQM-----GSTKDMMGMFGG 492
+ GLQN+MKQ+ G ++MG FGG
Sbjct: 477 MPGLQNIMKQLQQGAAGGLGNLMGGFGG 504
>gi|242033617|ref|XP_002464203.1| hypothetical protein SORBIDRAFT_01g014055 [Sorghum bicolor]
gi|241918057|gb|EER91201.1| hypothetical protein SORBIDRAFT_01g014055 [Sorghum bicolor]
Length = 471
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 311/483 (64%), Positives = 384/483 (79%), Gaps = 20/483 (4%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L GS+ A+ +M NAT++D+KVL++CLNEI+RALLQADV+F+ VR +Q +IK VNL L
Sbjct: 1 LSGSLKGALSRMCNATLVDQKVLDDCLNEISRALLQADVRFETVRRVQASIKSTVNLQAL 60
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKG-KP-SVIMFVGLQGSGKTTTCTKYAY 123
A G NKRR+I +A+ EL + LDPGKPSF P KG KP SV+MFVGLQGSGKTTTC KYA
Sbjct: 61 ADGTNKRRVIHRAVVAELRRTLDPGKPSFAPTKGRKPASVVMFVGLQGSGKTTTCVKYAD 120
Query: 124 YHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKE 182
YH++ KG PALVCADTFRAGAFDQLKQNATKA IPFYGS+TESDPV++AVEGV+ F+ E
Sbjct: 121 YHRRHKGLSPALVCADTFRAGAFDQLKQNATKAGIPFYGSHTESDPVKVAVEGVDRFRNE 180
Query: 183 N-CDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ CDLI+VDTSGRH+QEAAL EEMRQV++AT PDLV+FVMD+SIGQAAF QAQAF+QS
Sbjct: 181 DACDLIVVDTSGRHRQEAALLEEMRQVADATRPDLVVFVMDASIGQAAFQQAQAFRQSAP 240
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+ + E FD K FVSRLLG+GD S
Sbjct: 241 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHIPDLEAFDAKSFVSRLLGLGDLS 300
Query: 302 GFMDKIHEVVPMDQQP--ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
G M+KIH V D + ++L++L++ NFTLR + + F+ +L MGP+GQ+ SM+PG S+
Sbjct: 301 GLMEKIHGVPADDNRSPYQILEELTKENFTLRALRKLFRAMLSMGPLGQLVSMIPGLISD 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
+ EKE QAK+KRYMTMMDSMT+ ELD ++ KLMN SRI R+ARGSGR VREV++ML
Sbjct: 361 ---RFSEKEGQAKMKRYMTMMDSMTDAELDGTSTKLMNKSRINRVARGSGRPVREVVDML 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 479
EE+KR+AK+ SK+ +K P + H+ +PQ +L Q GG GLQ+L++Q
Sbjct: 418 EEHKRMAKMMSKLPNVKRPN-----------DINHLVNAIPQPLLNQFGGNFGLQSLIRQ 466
Query: 480 MGS 482
MG+
Sbjct: 467 MGA 469
>gi|321462130|gb|EFX73155.1| hypothetical protein DAPPUDRAFT_325390 [Daphnia pulex]
Length = 506
Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust.
Identities = 284/491 (57%), Positives = 377/491 (76%), Gaps = 15/491 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL++DV +LV++++ N+K ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNAMLKEICAALLESDVNIRLVKQLRENVKSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG + P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPVKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KKGWK LVCADTFRAGA+DQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYMKKGWKSCLVCADTFRAGAYDQLKQNATKARIPFYGSYTEVDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN + I+VDTSGRHKQE +LFEEM QVS A PD +IFVMD+SIGQA QA+AFK+ V
Sbjct: 181 AENFEFIVVDTSGRHKQEDSLFEEMLQVSNAVKPDNIIFVMDASIGQACEAQARAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT+SPVIFIGTGEH+D+ E F KPF+S+LLG+GD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVAATQSPVIFIGTGEHIDDLESFKTKPFISKLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D EL++K+ G FTLR MYEQF NI+KMGP Q+ M+PGFS +
Sbjct: 301 EGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFTNIMKMGPFSQIMGMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM + ELD + KL + +R+ R+ARGSG REV E
Sbjct: 360 MTKGGEQESMARLKKLMTIMDSMNDSELDHQDGAKLFSKQPTRMARVARGSGVTEREVKE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ +Y + A + KM G+K + K G+M ++N+N Q M++++ +L+++GG
Sbjct: 420 LISQYTKFAAVVKKMGGIKGLFKGGDM---TKNVNPTQMAKLNQQMARMMDPSVLQRMGG 476
Query: 470 VGGLQNLMKQM 480
+GGLQN+M+Q+
Sbjct: 477 MGGLQNMMRQL 487
>gi|383847489|ref|XP_003699385.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Megachile rotundata]
Length = 506
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 289/508 (56%), Positives = 386/508 (75%), Gaps = 20/508 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRLVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG ++ P KG+ +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPIKGRSNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVAIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAIQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G FTLR MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 301 EGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
MPKG E+ES ++KR MT+MDSM + ELD+ + KL + RI+R+A+GSG +EV +
Sbjct: 360 MPKGTEQESVVRLKRLMTIMDSMNDSELDNRDGAKLFSKQPGRIVRVAQGSGVTEKEVKD 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQ-------GMLKQIGG 469
++ +Y + A + KM G+K + K G+M S+N+N+ M+K+ Q +L Q+GG
Sbjct: 420 LITQYTKFAAVVKKMGGIKGLFKAGDM---SKNVNSTQMAKLNHQMAKMMDPRVLHQMGG 476
Query: 470 VGGLQNLMKQM-----GSTKDMMGMFGG 492
+ GLQN+MKQ+ G ++MG FGG
Sbjct: 477 MPGLQNIMKQLQQGTAGGLGNLMGGFGG 504
>gi|442752199|gb|JAA68259.1| Putative signal recognition particle subunit srp54 [Ixodes ricinus]
Length = 503
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 290/491 (59%), Positives = 375/491 (76%), Gaps = 15/491 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+++VL+ L EI ALL+AD+ KLV++++ N++ +
Sbjct: 1 MVLADLGRKITNALRSLSNATIINKEVLDSMLKEICTALLEADINIKLVKQLRENVRSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++D++ AG NKRR+IQ A+F EL K++DPG ++ P KGK ++IMFVGLQGSGKTTTCTK
Sbjct: 61 DIDEMGAGLNKRRMIQSAVFKELIKLVDPGVKAWQPTKGKNNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KKGWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYLKKGWKTCLVCADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVVIAQEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E ++I+VDTSGRHKQE +LFEEM QVS ATNPD +IFVMD+SIGQA QA+AFK+ V
Sbjct: 181 SEGFEIIVVDTSGRHKQEDSLFEEMLQVSNATNPDNIIFVMDASIGQACESQARAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VGAVIVTK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F VKPF+S+LLGMGD
Sbjct: 241 DVGAVIVTKLDGHAKGGGALSAVAATHSPIIFIGTGEHIDDFEPFKVKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D EL++KL G FTLR MYEQFQNI+KMGP Q+ M+PGFSS+
Sbjct: 301 EGLIDKVNE-LKLDDNEELIEKLKHGEFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSSDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVME 417
M KG E+ES ++K+ MT+MDSM ++ELD KL + R R ARG+G REV E
Sbjct: 360 MTKGNEQESMGRLKKLMTIMDSMNDQELDHREGAKLFSRQTGRGTRGARGAGVTTREVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
+L +Y + A + KM G+K + K G+M ++N+N Q M+K++ +L Q+GG
Sbjct: 420 LLAQYTKFAAMVKKMGGIKGLFKGGDM---AKNVNPAQMNKLNQQMAKMMDPRVLHQMGG 476
Query: 470 VGGLQNLMKQM 480
GLQN+M+Q+
Sbjct: 477 FSGLQNMMRQL 487
>gi|198432537|ref|XP_002131641.1| PREDICTED: similar to signal recognition particle 54 [Ciona
intestinalis]
Length = 497
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 293/489 (59%), Positives = 382/489 (78%), Gaps = 14/489 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VL L+EI RALL++DV +LV++++ N++ +
Sbjct: 1 MVLADLGRKINNALRSLSNATIINEEVLQSMLSEICRALLESDVNIRLVKKLRENVRSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A+G NKR++IQ A+F EL K++DPG ++ P KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMASGLNKRKMIQSAVFRELVKLVDPGVKAWQPTKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+K WK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA EGVETFK
Sbjct: 121 LAYYYQRKNWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEADPVVIASEGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+EN ++IIVDTSGRHKQE +LFEEM QV A PD VIFVMD+SIGQA QA+AFK+ V
Sbjct: 181 EENFEIIIVDTSGRHKQEDSLFEEMLQVYNAVAPDNVIFVMDASIGQACEGQARAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE+F +PFV +LL MGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDFEMFKTQPFVRKLLNMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL KL G FTLR MYEQFQNI+KMGP Q+ SM+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEELLDKLKHGQFTLRDMYEQFQNIMKMGPFSQIMSMIPGF-NDF 358
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLM--NDSRIMRIARGSGRQVREVME 417
M KG EK+S ++KR MT+MDSMT+EELD + KL N SR+ R+ARGSG +EV E
Sbjct: 359 MTKGHEKDSTERLKRLMTIMDSMTDEELDHKDGAKLFSKNPSRVARVARGSGTLPKEVNE 418
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEM------SALSRNMNAQHMSKVLPQGMLKQIGGV 470
+L ++ + A++ KM G+K + K G M S ++R +N Q M+K++ +L+Q+GG+
Sbjct: 419 LLGQHGKFAQMVKKMGGMKGLFKPGGMDKNVNPSQMAR-LNGQ-MAKLMDPRVLQQMGGM 476
Query: 471 GGLQNLMKQ 479
GLQN+M+Q
Sbjct: 477 NGLQNMMRQ 485
>gi|58386979|ref|XP_315212.2| AGAP004610-PA [Anopheles gambiae str. PEST]
gi|55239546|gb|EAA10561.2| AGAP004610-PA [Anopheles gambiae str. PEST]
Length = 504
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 286/507 (56%), Positives = 381/507 (75%), Gaps = 19/507 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATII+E+VL+ L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITNALHSLSKATIINEEVLDSMLKEICTALLEADVNIRLVKKLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYQKKNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE + IIVDTSGRHKQE +LFEEM V+ A NPD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGFEFIIVDTSGRHKQEESLFEEMLAVANAVNPDNIIFVMDATIGQACEAQAKAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D EL+ K+ G FT+R MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 301 EGLIDKVNE-LKLDDNEELIDKIKHGQFTIRDMYEQFQNIMKMGPFSQIMGMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +R+ R+A+GSG REV +
Sbjct: 360 MTKGGEQESMARIKRLMTMMDSMSDGELDNKDGAKLFSKQPTRVTRVAQGSGVMEREVRD 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ +Y + A + KM G+K + K G+M ++N+N Q M+K++ M +Q+GG
Sbjct: 420 LISQYTKFAAVIKKMGGIKGLFKSGDM---TKNVNPTQMAKLNQQMAKMIDPRMFQQMGG 476
Query: 470 VGGLQNLMKQM----GSTKDMMGMFGG 492
+ GLQN+M+Q+ G ++M FGG
Sbjct: 477 MNGLQNMMRQLQQGAGGLGNLMSGFGG 503
>gi|226430|prf||1512311A SRP protein 54kD
Length = 504
Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust.
Identities = 289/501 (57%), Positives = 384/501 (76%), Gaps = 11/501 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+A+ KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEAEFNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEE QVS A PD +++VMDS IGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEERLQVSNAIQPDNIVYVMDSDIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMWDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVGG 472
+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+ G
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAG 479
Query: 473 LQNLMKQM--GSTKDMMGMFG 491
LQ++M+Q G+ +M GM G
Sbjct: 480 LQSMMRQFQQGAAGNMKGMMG 500
>gi|340722086|ref|XP_003399441.1| PREDICTED: signal recognition particle 54 kDa protein-like [Bombus
terrestris]
Length = 506
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 286/508 (56%), Positives = 386/508 (75%), Gaps = 20/508 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRLVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DP ++ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPRVKAYQPIKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAIQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G FTLR MYEQFQN++KMGP Q+ M+PGFS +
Sbjct: 301 EGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMYEQFQNVMKMGPFSQLMGMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++KR MT+MDSM + ELD+ + KL + RI+R+A+GSG +EV +
Sbjct: 360 MSKGTEQESMARLKRIMTIMDSMNDSELDNRDGAKLFSKQPGRIIRVAQGSGVTEKEVKD 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ +Y + A + KM G+K + K G+M S+N+N+ M+K++ +L Q+GG
Sbjct: 420 VITQYTKFAAVVKKMGGIKGLFKAGDM---SKNVNSIQMAKLNHQMAKMMDPRVLHQMGG 476
Query: 470 VGGLQNLMKQM-----GSTKDMMGMFGG 492
+ GLQN+MKQ+ G ++MG FGG
Sbjct: 477 MPGLQNIMKQLQQGAAGGLGNLMGGFGG 504
>gi|350423805|ref|XP_003493597.1| PREDICTED: signal recognition particle 54 kDa protein-like [Bombus
impatiens]
Length = 506
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 286/508 (56%), Positives = 386/508 (75%), Gaps = 20/508 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRLVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DP ++ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPRVKAYQPIKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAIQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G FTLR MYEQFQN++KMGP Q+ M+PGFS +
Sbjct: 301 EGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMYEQFQNVMKMGPFSQLMGMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++KR MT+MDSM + ELD+ + KL + RI+R+A+GSG +EV +
Sbjct: 360 MSKGTEQESMARLKRIMTIMDSMNDSELDNRDGAKLFSKQPGRIVRVAQGSGVTEKEVKD 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ +Y + A + KM G+K + K G+M S+N+N+ M+K++ +L Q+GG
Sbjct: 420 VITQYTKFAAVVKKMGGIKGLFKAGDM---SKNVNSIQMAKLNHQMAKMMDPRVLHQMGG 476
Query: 470 VGGLQNLMKQM-----GSTKDMMGMFGG 492
+ GLQN+MKQ+ G ++MG FGG
Sbjct: 477 MPGLQNIMKQLQQGAAGGLGNLMGGFGG 504
>gi|170579858|ref|XP_001895013.1| signal recognition particle 54 kDa protein (SRP54) [Brugia malayi]
gi|158598201|gb|EDP36148.1| signal recognition particle 54 kDa protein (SRP54), putative
[Brugia malayi]
Length = 501
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 289/502 (57%), Positives = 376/502 (74%), Gaps = 20/502 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ ATII+E LN L E+ ALL+ADV +LV++++ N+KK +
Sbjct: 1 MVLADLGRKIRNAISKLGQATIINEDELNAMLKEVCAALLEADVNVRLVKQLKDNVKKTL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ+ +F EL K++DPG F P KGKP++ MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGVNKRRLIQRCVFTELMKLVDPGVKPFQPTKGKPNIFMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA GV+ FK
Sbjct: 121 LAYYYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVTIAANGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ ++IIVDTSGRHKQEA+LFEEM QVS A NP ++FVMD+SIGQA QA+AF ++V
Sbjct: 181 DDGFEIIIVDTSGRHKQEASLFEEMLQVSNAVNPSNIVFVMDASIGQACEAQARAFSETV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+D HAKGGGALSAVAAT SPVIFIGTGEH+D+FE F+VKPFV +LLGMGD
Sbjct: 241 DVGSVIITKLDSHAKGGGALSAVAATHSPVIFIGTGEHIDDFEPFEVKPFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G + K++E+ D + EL+++L G FTLR MYEQFQNI+KMGP Q+ SM+PGF +
Sbjct: 301 EGLVKKVNEIGIEDNE-ELIKRLKHGMFTLRDMYEQFQNIMKMGPFNQIMSMIPGFGPDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND------SRIMRIARGSGRQVRE 414
M KG E+ESQ+++K+ MT+MDSM++ ELD +PK ND R+ R+ARGSG E
Sbjct: 360 MSKGNEQESQSRLKKLMTIMDSMSDAELD--HPK-ANDLFSKEPGRVQRVARGSGTATSE 416
Query: 415 VMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQ 466
V E+L +YK+ A + KM +K + K G+M+ ++N+N Q M+K++ +L+Q
Sbjct: 417 VKELLTQYKKFADMVKKMGSMKGLFKNGDMN--TKNINPSQLQKLNQQMAKMMDPRVLQQ 474
Query: 467 IGGVGGLQNLMKQMGSTKDMMG 488
+GG+GGLQN+MKQ+ +G
Sbjct: 475 MGGMGGLQNMMKQLQGASSSLG 496
>gi|384250211|gb|EIE23691.1| 54-kd signal recognition particle specific protein [Coccomyxa
subellipsoidea C-169]
Length = 485
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 303/496 (61%), Positives = 368/496 (74%), Gaps = 31/496 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG IS+A+ + NA IDEKVL+ CL EI ALLQADV +LV +++ N+K
Sbjct: 1 MVLNELGQKISQALSMIQNAESIDEKVLDACLKEIVTALLQADVNVRLVGKLRDNVKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPG---KPSFTPKKGKPSVIMFVGLQGSGKTTT 117
N D AG NKR+II++A+ +EL ML G K KKG+P+VIMFVGLQG+GKTTT
Sbjct: 61 NNADKGAGLNKRKIIEKAVVDELSSMLSSGVDEKKLVDLKKGQPNVIMFVGLQGAGKTTT 120
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTKY Y++KKG+KPALVCADTFRAGAFDQLKQNATK +IPFYGSYTE+DP IA +GVE
Sbjct: 121 CTKYGAYYKKKGFKPALVCADTFRAGAFDQLKQNATKMQIPFYGSYTETDPAVIAAKGVE 180
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
FKK N DLIIVDTSGRHKQE +LFEEMRQVS T PDL+IFVMD SIGQAA DQA+AFK
Sbjct: 181 EFKKANHDLIIVDTSGRHKQEDSLFEEMRQVSVMTKPDLIIFVMDGSIGQAAEDQAKAFK 240
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V VGAVI+TKMDGHAKGGGALSAVAATKSP++FIGTGEHMDEFE F+ FV RLLG
Sbjct: 241 DTVEVGAVILTKMDGHAKGGGALSAVAATKSPIVFIGTGEHMDEFERFEPNAFVGRLLGR 300
Query: 298 GDWSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
GDW GF+DKI E VP D + EL+ LS+GNFT+RI+YEQ NI KMGP+GQ
Sbjct: 301 GDWRGFVDKISEAVPEDAMKEELMDSLSKGNFTMRILYEQLANIQKMGPVGQ-------- 352
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREV 415
G+EKES A+IK +MT+MDSMT++ELD NPK++ + SR+MR+ARG+G V
Sbjct: 353 -------GKEKESAARIKMFMTIMDSMTDKELDCPNPKVLQEQSRVMRVARGAGCNPYCV 405
Query: 416 MEMLEEYKRLAKI----WSKMKGL--KIPK-----KGEMSALSRNMNAQHMSKVLPQGML 464
+E+LEEYKR+ + K KG ++ K +G M+ + MN Q MS++LP +L
Sbjct: 406 LELLEEYKRIRALIMGPGGKGKGFMQQMSKQMGNSRGAMNPHNMQMNIQQMSRMLPPQVL 465
Query: 465 KQIGGVGGLQNLMKQM 480
KQ+GG G LQ L+KQM
Sbjct: 466 KQMGGAGALQGLLKQM 481
>gi|312381041|gb|EFR26883.1| hypothetical protein AND_06742 [Anopheles darlingi]
Length = 560
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 281/491 (57%), Positives = 375/491 (76%), Gaps = 15/491 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATII+E+VL+ L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITNALHSLSKATIINEEVLDSMLKEICTALLEADVNIRLVKKLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYQKKNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVVIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE + IIVDTSGRHKQE +LFEEM V+ A +PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGFEFIIVDTSGRHKQEESLFEEMLAVANAVDPDNIIFVMDATIGQACEAQAKAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D EL+ K+ G FT+R MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 301 EGLIDKVNE-LKLDDNEELIDKIKHGQFTIRDMYEQFQNIMKMGPFSQIMGMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +R+ R+A+GSG REV +
Sbjct: 360 MTKGGEQESMARIKRLMTMMDSMSDGELDNKDGAKLFSKQPTRVTRVAQGSGVMEREVRD 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ +Y + A + KM G+K + K G+M ++N+NA Q M+K++ M +Q+GG
Sbjct: 420 LISQYTKFAAVIKKMGGIKGLFKSGDM---TKNVNATQMAKLNQQMAKMIDPRMFQQMGG 476
Query: 470 VGGLQNLMKQM 480
+ GLQN+M+Q+
Sbjct: 477 MSGLQNMMRQL 487
>gi|47214799|emb|CAF89626.1| unnamed protein product [Tetraodon nigroviridis]
Length = 514
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 291/513 (56%), Positives = 384/513 (74%), Gaps = 29/513 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIATEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 AENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACESQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +D++++ + +D +L+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGF ++
Sbjct: 301 EGLIDRVND-LKLDDNEDLINKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELD + KL + +RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDCKDGAKLFSKQPNRIQRVARGSGVATRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI--------- 467
+L +Y + A++ KM G+K + K G+M S+N+N M+K L Q M K +
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAK-LNQQMAKMMDPRVLHHMG 475
Query: 468 ---------GGVGGLQNLMKQM--GSTKDMMGM 489
GG+ GLQ++M+Q G+ +M GM
Sbjct: 476 ECGPAQQHPGGMTGLQSMMRQFQQGAAGNMKGM 508
>gi|443709552|gb|ELU04185.1| hypothetical protein CAPTEDRAFT_160274 [Capitella teleta]
Length = 505
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 285/505 (56%), Positives = 379/505 (75%), Gaps = 12/505 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +S+AT+I+E+VLN L EI ALL+ADV KLV++++ N+K ++
Sbjct: 1 MVLADLGRKITTALRSLSSATVINEEVLNSLLKEICTALLEADVNIKLVKKLRENVKSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKRR+IQ A+F EL K++DPG ++ P KGK ++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAAGLNKRRMIQSAVFKELVKLIDPGVKAWQPTKGKNNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADT+RAGAFDQLKQNA KA+IP+YGS E+DPV IA +GVE FK
Sbjct: 121 LAYYYQKKGWKTCLICADTYRAGAFDQLKQNAIKARIPYYGSLHETDPVVIAQDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE +IIVDTSGRHKQE +LFEEM QV+ +PD +++VMD+SIGQA QA AFK+ V
Sbjct: 181 KEGFQIIIVDTSGRHKQEDSLFEEMLQVANVVSPDNIVYVMDASIGQACEAQAMAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VI+TK+D HAKGGGALSAVAATKSP+IFIGTGEH+D+FE F V+PFVS+LLGMGD
Sbjct: 241 DVASVIITKLDSHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKVQPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + ++ EL++KL G FTLR MYEQFQNI+KMGP Q+ SM+PG ++
Sbjct: 301 EGLIDKVNE-LKLEDNEELMKKLRHGQFTLRDMYEQFQNIMKMGPFSQIMSMIPGLGNDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDS-SNPKLMND-SRIMRIARGSGRQVREVMEM 418
M KG E+ES A++K+ MT+MDSM + ELDS KL R+ R+ARG+G EV E+
Sbjct: 360 MTKGNEQESMARLKKLMTIMDSMNDSELDSHEGAKLFRQKGRVQRVARGAGVSCNEVEEL 419
Query: 419 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV-------LPQGMLKQIGGVG 471
L++Y + A++ KM G+K KG +++N+N M+K+ + +L+Q+GG+
Sbjct: 420 LKQYTKFAQMVKKMGGIKGLFKGSGGDMAKNVNPTQMAKLNQNIARMMDPRVLQQMGGMS 479
Query: 472 GLQNLMKQM--GSTKDMMGMFGGGE 494
GLQN+M+Q G+ M MFG GE
Sbjct: 480 GLQNMMRQFQAGAGGKMGNMFGMGE 504
>gi|340371045|ref|XP_003384056.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Amphimedon queenslandica]
Length = 501
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 283/490 (57%), Positives = 376/490 (76%), Gaps = 15/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+V+ L EI ALL+ADV KLV ++ N++ +
Sbjct: 1 MVLADLGRKITTALRSLSNATVINEEVVQAMLKEICTALLEADVNVKLVGRLRQNVRDAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +++AAG NKR+IIQ ++FNELC+++DPG P++T KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFEEMAAGLNKRKIIQSSVFNELCRLIDPGVPAWTATKGKQNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA+EGVE FK
Sbjct: 121 LAYHYQHKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAMEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+N ++IIVDTSGRHKQE +LFEEM QVS+A NPD +I+VMD++IGQA QA+AFK V
Sbjct: 181 ADNFEIIIVDTSGRHKQEESLFEEMLQVSQAINPDNIIYVMDATIGQACESQARAFKAKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT+SP+ FIGTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATESPITFIGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK+ E + +D+ EL++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 QGLVDKVSE-LGLDENEELVKKLQHGEFTLRDMYEQFQNIMKMGPFNQIMGMIPGFPADF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM++ ELD N KL R R+ARGSG V++V +
Sbjct: 360 MSKGNERESMARLKKLMTIMDSMSDGELDHPNGAKLFQQQPGRYERVARGSGTSVKDVKD 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQ-------GMLKQIGG 469
++ +Y + +++ KM G+K + K G+ + RN+N M+K+ Q +L+Q+GG
Sbjct: 420 LMTQYSKFSQMVKKMGGIKGLFKSGD---IGRNVNPNQMAKINQQMARMIDPRVLQQMGG 476
Query: 470 VGGLQNLMKQ 479
+GGLQ++MKQ
Sbjct: 477 MGGLQHMMKQ 486
>gi|294950295|ref|XP_002786558.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
gi|239900850|gb|EER18354.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
Length = 533
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 287/478 (60%), Positives = 372/478 (77%), Gaps = 3/478 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG IS A++++ AT+IDE VL+ECL EI+ ALLQADV + V E++ NIK+ V
Sbjct: 1 MVLADLGKQISGALRKLGKATVIDEAVLDECLKEISTALLQADVNVRYVAELRKNIKRTV 60
Query: 61 NLDDLAA-GHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+L++LAA G NK+R+IQ+A+ N+L +ML P K + PKKG+P+VIMFVGLQGSGKTT+CT
Sbjct: 61 DLEELAAPGSNKQRVIQKAVVNQLVEMLSPDKEPYKPKKGQPNVIMFVGLQGSGKTTSCT 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
KYA+Y+Q+KGW+ ALVCADTFRAGAFDQLKQNATK KIPFYGSY ESDPV+IA EGV+ F
Sbjct: 121 KYAHYYQRKGWRVALVCADTFRAGAFDQLKQNATKVKIPFYGSYVESDPVKIAKEGVDLF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + D+IIVDTSGRH+QEAALF+EM QV++A NPD ++FVMDS IGQA F+QA+AFK +
Sbjct: 181 KMDKYDIIIVDTSGRHRQEAALFDEMTQVAKAVNPDEIVFVMDSHIGQACFEQAKAFKDT 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
VSVG+V+VTK+DGHAKGGGALSAVAAT SP+IFIGTGEH DEFE FD + FV RLLG+GD
Sbjct: 241 VSVGSVVVTKLDGHAKGGGALSAVAATDSPIIFIGTGEHFDEFEPFDAQSFVQRLLGLGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
G M I E +P+D+Q +L+ ++ G F+LR + EQF +++MGP+ +V SM+PG S
Sbjct: 301 IKGLMSTIGEAMPLDKQGDLMARMQSGQFSLRDLREQFGTVMRMGPLSKVMSMIPGMQSS 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
++P G E+E K+K Y+TMMDSMT++ELD + SRI+R+ARGSG V EV ++
Sbjct: 361 MLPPGAEQEGVKKMKAYLTMMDSMTDKELDGDQDFCGSHSRILRVARGSGHAVGEVETLV 420
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQN 475
EEY++ +K+ SKM +K+ M + RN N Q+M K++ MLKQ+GG GGL N
Sbjct: 421 EEYRKYSKMVSKMGKMKLGDPRTMQQMMRNPNQMMQNMGKMIDPKMLKQMGGQGGLMN 478
>gi|110763770|ref|XP_624497.2| PREDICTED: signal recognition particle 54 kDa protein-like [Apis
mellifera]
Length = 498
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 281/491 (57%), Positives = 378/491 (76%), Gaps = 15/491 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRLVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG ++ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPIKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAIQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G FTLR MYEQFQN++KMGP Q+ M+PGFS +
Sbjct: 301 EGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMYEQFQNVMKMGPFSQLMGMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++KR MT+MDSM + ELD+ + KL + RI R+A+GSG +EV +
Sbjct: 360 MSKGTEQESMARLKRIMTIMDSMNDSELDNRDGAKLFSKQPGRITRVAQGSGVTEKEVKD 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ +Y + A + KM G+K + K G+M S+N+N+ M+K++ +L Q+GG
Sbjct: 420 VITQYTKFAAVVKKMGGIKGLFKAGDM---SKNVNSIQMAKLNHQMAKMMDPRVLHQMGG 476
Query: 470 VGGLQNLMKQM 480
+ GLQN+MKQ+
Sbjct: 477 MPGLQNIMKQL 487
>gi|196016017|ref|XP_002117863.1| signal recognition particle 54 [Trichoplax adhaerens]
gi|190579532|gb|EDV19625.1| signal recognition particle 54 [Trichoplax adhaerens]
Length = 505
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 279/494 (56%), Positives = 382/494 (77%), Gaps = 15/494 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ +SNATII+E+V+ L EI ALL++DV +LV+ ++ N++ +
Sbjct: 1 MVLAELGRKITDALRSLSNATIINEEVVQALLKEICAALLESDVNVQLVKRLRENVRAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +++AAG NKRRI+Q+A+FNELCK++DPG ++ P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFEEMAAGLNKRRILQRAVFNELCKLVDPGVKAWQPTKGKNNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+Y+Q+KGWK L+CADTFRAGAFDQLKQN+TKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 MAHYYQRKGWKTCLICADTFRAGAFDQLKQNSTKARIPFYGSYTEMDPVVIAHDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN ++IIVDTSGRHKQE +LFEEM Q+S PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KENFEIIIVDTSGRHKQEDSLFEEMLQLSNTITPDNIIFVMDATIGQACEAQARAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VI+TK+DGHAKGGG+LSAVAAT+SP+IFIGTGEH+++FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIITKLDGHAKGGGSLSAVAATRSPIIFIGTGEHIEDFEQFKTRPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK+ E + +D+ EL++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF E
Sbjct: 301 EGLIDKVTE-LKLDENEELIEKLKHGQFTLRDMYEQFQNIMKMGPFNQIIGMIPGFGPEF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDS--RIMRIARGSGRQVREVME 417
M KG E++S ++KR MT+MDSM +EELD+ + K + + R R+ARG+G +REV E
Sbjct: 360 MSKGNEQDSMKRLKRLMTIMDSMNDEELDNRDGAKFFSRTPGRTQRVARGAGVSIREVHE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
+L ++ + A++ KM G+K + K G+M ++N+N Q MS+++ +L+Q+GG
Sbjct: 420 LLSQHTKFAQVVKKMGGIKGLFKGGDM---NKNVNPSQMAKLNQQMSRMIDPRVLQQMGG 476
Query: 470 VGGLQNLMKQMGST 483
+ G+QN+M+Q S+
Sbjct: 477 MPGIQNMMRQFQSS 490
>gi|391347716|ref|XP_003748101.1| PREDICTED: uncharacterized protein LOC100903576 [Metaseiulus
occidentalis]
Length = 1627
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 279/490 (56%), Positives = 378/490 (77%), Gaps = 13/490 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +S AT+I+++VL+ L EI ALL++D+ +LV++++ N++ +
Sbjct: 1 MVLADLGRRITGALRNLSTATVINQEVLDSMLKEICAALLESDINVRLVKQLRDNVRAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++++A G N+R+++Q A+F EL K++DPG ++TP+KG+ + IMFVGLQGSGKTTTCTK
Sbjct: 61 DIEEMAVGLNRRKVVQSAVFKELVKLVDPGVKAWTPQKGRSNTIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KKGWK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV FK
Sbjct: 121 LAYHYMKKGWKTALVCADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVVIAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ ++IIVDTSGRHKQE +LFEEM +VS A +PD VIFVMD+SIGQA QA+AFK+ V
Sbjct: 181 AEHFEIIIVDTSGRHKQEDSLFEEMLEVSNAVSPDNVIFVMDASIGQACELQARAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+D+FE F VKPF+ +LLG+GD
Sbjct: 241 DVASVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFEPFRVKPFIQKLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E+ +D+ EL++KL G FTLR MYEQFQNI+KMGP Q+ M+PGFS++
Sbjct: 301 EGLIDKVNELK-LDENHELIEKLKHGEFTLRDMYEQFQNIMKMGPFNQLMGMIPGFSADF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVME 417
M KG E+ES +++KR MT+MDSMT++ELD+ M +RI R+ARG+G EV E
Sbjct: 360 MTKGNEQESMSRLKRLMTIMDSMTDDELDNREGARMFAKQQTRITRVARGAGCTTFEVHE 419
Query: 418 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV-------LPQGMLKQIGGV 470
+L +Y + A + KM G+K KG + L++N+N HM+K+ + +L+Q+GG
Sbjct: 420 LLNQYTKFAGMVKKMGGMKGLFKG--NDLAKNVNPAHMNKLSAEMAKMIDPRVLQQMGGF 477
Query: 471 GGLQNLMKQM 480
G+QN+M+QM
Sbjct: 478 SGIQNMMRQM 487
>gi|159471143|ref|XP_001693716.1| subunit of the signal recognition particle [Chlamydomonas
reinhardtii]
gi|158283219|gb|EDP08970.1| subunit of the signal recognition particle [Chlamydomonas
reinhardtii]
Length = 503
Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust.
Identities = 295/504 (58%), Positives = 394/504 (78%), Gaps = 15/504 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG IS+A+ ++ +++IDEKVL+ L EI ALLQ+DV K V ++ +KK V
Sbjct: 1 MVLQELGSRISKAVATLAASSVIDEKVLDALLKEICTALLQSDVNVKQVANLRNGVKKRV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
N+ +LAAG NK+R+I++A+F+ELC MLD P K +KGK V+MFVGLQGSGKTT
Sbjct: 61 NIQELAAGLNKQRVIEKAVFDELCDMLDSGADPKKLELKKEKGKQQVVMFVGLQGSGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTKYAYY++KKGWKPALVCADT+RAGAFDQLKQNATKA+IPFYGSY E+DP IA +GV
Sbjct: 121 TCTKYAYYYKKKGWKPALVCADTYRAGAFDQLKQNATKAQIPFYGSYKETDPAAIAQQGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
F++E DLIIVDTSGRHKQEAALFEEM+QV+ A +PD++IFVMD SIGQAAFDQA+AF
Sbjct: 181 LRFREEGRDLIIVDTSGRHKQEAALFEEMKQVAAAVSPDVIIFVMDGSIGQAAFDQAKAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K++V VGAVI+TK+DGHAKGGGALSAV+ATKSP+IF+GTGEHMD+FE F+ K FV RLLG
Sbjct: 241 KEAVEVGAVIITKLDGHAKGGGALSAVSATKSPIIFLGTGEHMDQFESFETKRFVQRLLG 300
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
GD SG MDKI +V+P D+QPELL +S+GN +R++ + F+++L++GP+ Q+ SMLPGF
Sbjct: 301 KGDVSGLMDKIQDVIPEDKQPELLDTISKGNVNMRVLKDMFESVLELGPMSQMMSMLPGF 360
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREV 415
+SELMPKG +K++Q I+RY+T+++SMT++E+D++N K++++ SR+ R+ARGSG +V
Sbjct: 361 NSELMPKGNDKQNQMMIRRYITIIESMTDKEMDTTNIKMLSETSRVNRLARGSGSTPAQV 420
Query: 416 MEMLEEYKRLAKIWSK-MKGLKIPK-----KGEMSALSRNMNAQ--HMSKVLPQGMLKQI 467
+ +LE YK +K ++ +K +PK KG++ R M A MS+ LP +++Q+
Sbjct: 421 LALLESYKHYSKYATQALKAANLPKNLKGMKGDVQMNPRQMQAALGKMSRALPPQLMQQL 480
Query: 468 GGVGGLQNLMKQMGSTKDMMGMFG 491
GG+ GLQ+LMK G MMG G
Sbjct: 481 GGMSGLQSLMK--GLDGKMMGGMG 502
>gi|393907084|gb|EFO21698.2| signal recognition particle protein [Loa loa]
Length = 501
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 285/502 (56%), Positives = 376/502 (74%), Gaps = 20/502 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ ATII+E LN L E+ ALL+ADV +LV+ ++ N+K+ +
Sbjct: 1 MVLADLGRKIRNAISKLGQATIINEDELNAMLKEVCAALLEADVNVRLVKVLKDNVKRTL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ+ +F EL K++DPG F P KGKP++ MFVGLQGSGKTTTC+K
Sbjct: 61 DFDEMAGGVNKRRLIQRCVFTELMKLVDPGVKPFQPTKGKPNIFMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY E DPV IA GV+ FK
Sbjct: 121 LAYYYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYIEMDPVTIAASGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
++ ++I+VDTSGRHKQEA+LFEEM QVS A NP+ ++FVMD+SIGQA QA+AF ++V
Sbjct: 181 EDGFEIIVVDTSGRHKQEASLFEEMLQVSNAVNPNNIVFVMDASIGQACEAQARAFSETV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+D HAKGGGALSAVAAT SPVIFIGTGEH+D+FE F+VKPFV +LLGMGD
Sbjct: 241 DVGSVIITKLDSHAKGGGALSAVAATHSPVIFIGTGEHIDDFEPFEVKPFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G + K++E+ D + EL+++L G FTLR MYEQFQNI+KMGP Q+ SM+PGF +
Sbjct: 301 EGLVKKVNEIGIEDNE-ELIKRLKHGMFTLRDMYEQFQNIMKMGPFNQIMSMIPGFGPDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND------SRIMRIARGSGRQVRE 414
M KG E+ESQ+++K+ MT+MDSM++ ELD +PK ND R+ R+ARGSG E
Sbjct: 360 MSKGNEQESQSRLKKLMTIMDSMSDAELD--HPK-ANDLFSKEPGRVQRVARGSGTATSE 416
Query: 415 VMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQ 466
V E+L +YK+ A + KM +K + K G+M+ ++N+N Q M+K++ +L+Q
Sbjct: 417 VKELLTQYKKFADMVKKMGSMKGLFKNGDMN--TKNINPSQLQKLNQQMAKMMDPRVLQQ 474
Query: 467 IGGVGGLQNLMKQMGSTKDMMG 488
+GG+GGLQN+MKQ+ +G
Sbjct: 475 MGGMGGLQNMMKQLQGASSSLG 496
>gi|294944803|ref|XP_002784438.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
gi|239897472|gb|EER16234.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
Length = 528
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 284/478 (59%), Positives = 373/478 (78%), Gaps = 3/478 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG IS A++++ AT+IDE VL+ECL EI+ ALLQADV + V E++ NIK+ V
Sbjct: 1 MVLADLGKQISGALRKLGKATVIDEAVLDECLKEISTALLQADVNVRYVAELRKNIKRTV 60
Query: 61 NLDDLAA-GHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+L++LAA G NK+R+IQ+A+ N+L +ML P K + P KG+P+VIMFVGLQGSGKTT+CT
Sbjct: 61 DLEELAAPGSNKQRVIQKAVVNQLVEMLSPDKEPYKPTKGQPNVIMFVGLQGSGKTTSCT 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
KYA+Y+Q+KGW+ ALVCADTFRAGAFDQLKQNATK KIPFYGSY ESDPV+IA EGV+ F
Sbjct: 121 KYAHYYQRKGWRVALVCADTFRAGAFDQLKQNATKVKIPFYGSYVESDPVKIAKEGVDLF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KK+ D+IIVDTSGRH+QEAALF+EM QV+ A NP+ ++FVMDS IGQA F+QA+AFK +
Sbjct: 181 KKDKYDIIIVDTSGRHRQEAALFDEMTQVAHAVNPNDIVFVMDSHIGQACFEQAKAFKDT 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
VSVG+V+VTK+DGHAKGGGALSAVAAT SP+IFIGTGEH DEFE FD + FV RLLG+GD
Sbjct: 241 VSVGSVVVTKLDGHAKGGGALSAVAATDSPIIFIGTGEHFDEFEPFDAQSFVQRLLGLGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
G M I E +P+++Q +++ ++ G F+LR + EQF +++MGP+ +V SM+PG S
Sbjct: 301 IKGLMSTIGEAMPLEKQGDMMARMQSGQFSLRDLREQFGTVMRMGPLSKVMSMIPGMQSS 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
++P G E+E K+K Y+TMMDSMT++ELD ++SRI+R+A+GSG VREV ++
Sbjct: 361 MLPPGAEQEGVKKMKAYLTMMDSMTDKELDGEQDFCGSNSRIVRVAKGSGHAVREVEMLV 420
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQN 475
EEY++ +K+ SKM +K+ M + RN N Q+M K++ MLKQ+GG GGL N
Sbjct: 421 EEYRKYSKMVSKMGKMKLGDPRTMQQMMRNPNQMMQNMGKMIDPKMLKQMGGQGGLMN 478
>gi|332372642|gb|AEE61463.1| unknown [Dendroctonus ponderosae]
Length = 505
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 286/504 (56%), Positives = 378/504 (75%), Gaps = 14/504 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATII+E VLN L EI ALL+ADV K+V+ ++ N++ ++
Sbjct: 1 MVLADLGRKITSALHGLSKATIINEDVLNGMLKEICAALLEADVNVKMVKALRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DP F P KGKP++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPSVKPFQPVKGKPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKK WK LVCADTFRAGA+DQ+KQN TKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 MAYYYQKKNWKSCLVCADTFRAGAYDQVKQNCTKARIPFYGSYTEVDPVIIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE+ ++IIVDTSGRHKQE +LFEEM QVS A PD ++FVMD++IGQA +QA+AFK V
Sbjct: 181 KEHFEIIIVDTSGRHKQEDSLFEEMLQVSNAVKPDNIVFVMDATIGQACEEQARAFKAKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT SP+IFIG GEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVAATSSPIIFIGVGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + ++ ELL+K+ G FTLR MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 301 EGLIDKVNE-LKLEDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMN--DSRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM + ELDS + K+ + RI+R+A+GSG REV E
Sbjct: 360 MSKGSEQESMARLKKLMTIMDSMNDGELDSRDGAKVFSKQQGRIVRVAQGSGVTEREVKE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVGG 472
++ +Y + A + KM G+K + K G+M +++N A Q M++++ +L Q+GG+ G
Sbjct: 420 LIAQYTKFAAVVKKMGGIKGLFKGGDMGKNVNQNQMAKLNQQMARMMDPRVLHQMGGMAG 479
Query: 473 LQNLMKQM-----GSTKDMMGMFG 491
LQN+M+Q+ G ++MG FG
Sbjct: 480 LQNMMRQLQSGAAGGLGNLMGGFG 503
>gi|324502545|gb|ADY41120.1| Signal recognition particle 54 kDa protein [Ascaris suum]
Length = 503
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 286/502 (56%), Positives = 377/502 (75%), Gaps = 20/502 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ ATII+E LN LNE+ ALL+ADV +LV++++ N+KK +
Sbjct: 1 MVLADLGRRIRNAIGKLGQATIINEDELNAMLNEVCGALLEADVNIRLVKQLRDNVKKTL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ+ +F EL K++DPG + P KGKP+V MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGVNKRRLIQRCVFTELMKLVDPGVKPYQPTKGKPNVFMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADTFRAGAFDQLKQNATKA+IP+YGSY E DPV IA GV+ FK
Sbjct: 121 LAYYYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPYYGSYIEMDPVVIATNGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E ++IIVDTSGRHKQEA+LFEEM QVS A +P+ V+FVMD+SIGQA QA+AF +V
Sbjct: 181 GEGFEIIIVDTSGRHKQEASLFEEMLQVSNAISPNNVVFVMDASIGQACEAQARAFSTTV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+D HAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F+VKPFV +LLGMGD
Sbjct: 241 DVGSVIITKLDSHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFEVKPFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G + K++E + ++ EL+++L G FTLR MYEQFQNI+KMGP Q+ SM+PGF +
Sbjct: 301 EGLVKKVNE-MGLEDNEELIKRLKHGMFTLRDMYEQFQNIMKMGPFNQIMSMIPGFGQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND------SRIMRIARGSGRQVRE 414
M KG E+ESQ+++K+ MT+MDSM++ ELD +PK ND R+ R+ARGSG V +
Sbjct: 360 MTKGNEQESQSRLKKLMTIMDSMSDLELD--HPK-ANDLFSKEPGRVQRVARGSGTSVSD 416
Query: 415 VMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQ 466
V E+L +YK+ A + KM +K + K G+M+ ++N+N Q M+K++ +L+
Sbjct: 417 VKELLTQYKKFADMVKKMGSMKGLFKNGDMN--TKNINPSQLQKLNQQMAKMMDPRVLQH 474
Query: 467 IGGVGGLQNLMKQMGSTKDMMG 488
+GG+GGLQN+M+Q+ MG
Sbjct: 475 MGGMGGLQNMMRQLQGASSAMG 496
>gi|30580515|sp|Q8MZJ6.1|SRP54_GEOCY RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|20750404|gb|AAM23234.1| signal recognition particle 54 kD protein [Geodia cydonium]
Length = 499
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 294/502 (58%), Positives = 369/502 (73%), Gaps = 14/502 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ T+I+E+VL L EI ALL+ADV KLV +++ N++ +
Sbjct: 1 MVLADLGRKITTALLP-RQRTVINEEVLQAMLKEICTALLEADVNVKLVGKLRQNVRAAI 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +D+ AG +KRRIIQ ++FNELCK+LDPG P + P KG +VIMFVGLQGSGKTTTCTK
Sbjct: 60 DFEDMGAGLSKRRIIQTSVFNELCKLLDPGVPVWHPTKGHSNVIMFVGLQGSGKTTTCTK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKKGWK LVCADTFRAGAFDQLKQNATKA++PFYGSYTE DPV IA EGVE FK
Sbjct: 120 LAYHYQKKGWKTCLVCADTFRAGAFDQLKQNATKARVPFYGSYTEMDPVVIAQEGVEKFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+++ ++IIVDTSGRHKQE +LFEEM QVS+A +PD +IFVMD +IGQA QA+AFK+ V
Sbjct: 180 EDSFEVIIVDTSGRHKQEESLFEEMLQVSQAIDPDNIIFVMDGTIGQACESQARAFKEKV 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+DE E F KPFVS+LLGMGD
Sbjct: 240 DVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDEMEPFKTKPFVSKLLGMGDL 299
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G M+K+ + + +D+ EL+ KL G FTLR MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 300 EGLMEKVSD-LKLDENEELMDKLKHGQFTLRDMYEQFQNIMKMGPFNQIIGMIPGFSPDF 358
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES AK+KR MTMMDSM + ELD N KL + R R+ARGSG VREV E
Sbjct: 359 MSKGNERESMAKLKRLMTMMDSMNDGELDHPNGAKLFSKQPGRAARVARGSGTSVREVNE 418
Query: 418 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGGV 470
+L++Y + KM G+K KG L +N+N Q M+K++ +L+Q+GG+
Sbjct: 419 LLKQYSNFSATVKKMGGIKGLFKG--GDLGKNVNPSQMAKLNQQMAKMMDPRVLQQMGGM 476
Query: 471 GGLQNLMKQMGSTKDMMGMFGG 492
GLQN+M+Q M F G
Sbjct: 477 SGLQNMMRQFQQGASNMPGFKG 498
>gi|312079906|ref|XP_003142374.1| signal recognition particle protein [Loa loa]
Length = 530
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 285/502 (56%), Positives = 376/502 (74%), Gaps = 20/502 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ ATII+E LN L E+ ALL+ADV +LV+ ++ N+K+ +
Sbjct: 30 MVLADLGRKIRNAISKLGQATIINEDELNAMLKEVCAALLEADVNVRLVKVLKDNVKRTL 89
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ+ +F EL K++DPG F P KGKP++ MFVGLQGSGKTTTC+K
Sbjct: 90 DFDEMAGGVNKRRLIQRCVFTELMKLVDPGVKPFQPTKGKPNIFMFVGLQGSGKTTTCSK 149
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY E DPV IA GV+ FK
Sbjct: 150 LAYYYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYIEMDPVTIAASGVDKFK 209
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
++ ++I+VDTSGRHKQEA+LFEEM QVS A NP+ ++FVMD+SIGQA QA+AF ++V
Sbjct: 210 EDGFEIIVVDTSGRHKQEASLFEEMLQVSNAVNPNNIVFVMDASIGQACEAQARAFSETV 269
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+D HAKGGGALSAVAAT SPVIFIGTGEH+D+FE F+VKPFV +LLGMGD
Sbjct: 270 DVGSVIITKLDSHAKGGGALSAVAATHSPVIFIGTGEHIDDFEPFEVKPFVQKLLGMGDI 329
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G + K++E+ D + EL+++L G FTLR MYEQFQNI+KMGP Q+ SM+PGF +
Sbjct: 330 EGLVKKVNEIGIEDNE-ELIKRLKHGMFTLRDMYEQFQNIMKMGPFNQIMSMIPGFGPDF 388
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND------SRIMRIARGSGRQVRE 414
M KG E+ESQ+++K+ MT+MDSM++ ELD +PK ND R+ R+ARGSG E
Sbjct: 389 MSKGNEQESQSRLKKLMTIMDSMSDAELD--HPK-ANDLFSKEPGRVQRVARGSGTATSE 445
Query: 415 VMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQ 466
V E+L +YK+ A + KM +K + K G+M+ ++N+N Q M+K++ +L+Q
Sbjct: 446 VKELLTQYKKFADMVKKMGSMKGLFKNGDMN--TKNINPSQLQKLNQQMAKMMDPRVLQQ 503
Query: 467 IGGVGGLQNLMKQMGSTKDMMG 488
+GG+GGLQN+MKQ+ +G
Sbjct: 504 MGGMGGLQNMMKQLQGASSSLG 525
>gi|170046875|ref|XP_001850971.1| signal recognition particle 54 kda protein [Culex quinquefasciatus]
gi|167869479|gb|EDS32862.1| signal recognition particle 54 kda protein [Culex quinquefasciatus]
Length = 515
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 282/506 (55%), Positives = 380/506 (75%), Gaps = 19/506 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATII+ +VL+ L EI ALL+ADV +LV++++ N+K ++
Sbjct: 12 MVLADLGRKITNALHSLSKATIINAEVLDAMLKEICTALLEADVNIRLVKKLRENVKSVI 71
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 72 DFDEMAGGLNKRRMIQTAVFKELVKLVDPGVKPYQPVKGRPNIIMFVGLQGSGKTTTCTK 131
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 132 LAYHYQKKNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVVIAQDGVEMFK 191
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE + IIVDTSGRHKQE +LFEEM V+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 192 KEGFEFIIVDTSGRHKQEESLFEEMLAVATAIKPDNIIFVMDATIGQACEAQAKAFKEKV 251
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 252 DIGSVIITKLDGHAKGGGALSAVAATSSPIIFIGTGEHIDDLEPFKTKPFISKLLGMGDI 311
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++K++++ +D EL+ K+ G FT+R MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 312 EGLIEKVNDL-NLDDNEELIDKIKHGQFTIRDMYEQFQNIMKMGPFSQIMGMIPGFSQDF 370
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +R++R+A+GSG REV +
Sbjct: 371 MTKGGEQESMARIKRLMTMMDSMSDGELDNKDGAKLFSKQPTRVVRVAQGSGVTDREVRD 430
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ +Y + A + KM G+K + K G+M+ +N+N Q M+K++ M +Q+GG
Sbjct: 431 LITQYTKFAAVIKKMGGIKGLFKSGDMT---KNVNPTQMAKLNQQMAKMIDPRMFQQMGG 487
Query: 470 VGGLQNLMKQM----GSTKDMMGMFG 491
+ GLQN+M+Q+ G ++MG FG
Sbjct: 488 MSGLQNMMRQLQQGAGGLGNLMGGFG 513
>gi|357630058|gb|EHJ78449.1| putative signal recognition particle 54 kDa protein [Danaus
plexippus]
Length = 501
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 282/505 (55%), Positives = 374/505 (74%), Gaps = 15/505 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+Q +S ATII+E+VLN L +I ALL+ADV +LV+ ++ N++ ++
Sbjct: 1 MVLADLGRKITTALQSLSRATIINEEVLNSMLKQICAALLEADVNIRLVKNLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPVKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ +K WK LVCADTFRAGA+DQ+KQN TKA+IPFYGSYTE DPV IA GV+ FK
Sbjct: 121 LAYHYLRKNWKSCLVCADTFRAGAYDQVKQNCTKARIPFYGSYTEVDPVVIASTGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM V+ A PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 KEGFEMIIVDTSGRHKQEESLFEEMLAVATAIKPDNIIFVMDATIGQACESQARAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPF+++LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFINKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK+HE + +D ELL+KL G FTLR MYEQFQNI+KMGP Q+ M+PGFS +L
Sbjct: 301 EGLLDKVHE-LKLDDNDELLEKLKHGQFTLRAMYEQFQNIMKMGPFSQIMGMIPGFSQDL 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES AK+KR MT+MDSM ELD + KL + +RI R+A+G+G R+V +
Sbjct: 360 MSKGSEQESMAKLKRLMTIMDSMNEGELDHRDGAKLFSKQPTRITRVAQGAGVTERDVKD 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ +Y + A + KM G+K + K G+M ++N+N Q M+K++ +L+Q+GG
Sbjct: 420 LIAQYTKFAAVVKKMGGIKGLFKGGDM---AKNVNQTQMAKLNQQMAKMMDPRILQQMGG 476
Query: 470 VGGLQNLMKQMGSTKDMMGMFGGGE 494
+ GL N+M+Q+ M GG+
Sbjct: 477 MSGLHNMMRQLQQGSSGMNSLMGGK 501
>gi|91079686|ref|XP_967889.1| PREDICTED: similar to AGAP004610-PA [Tribolium castaneum]
gi|270003347|gb|EEZ99794.1| hypothetical protein TcasGA2_TC002574 [Tribolium castaneum]
Length = 508
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 281/489 (57%), Positives = 374/489 (76%), Gaps = 15/489 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+Q +S ATII+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALQSLSKATIINEEVLNGMLKEICAALLEADVNIRLVKKLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPVKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKK WK LVCADTFRAGA+DQ+KQN TKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKKNWKSCLVCADTFRAGAYDQVKQNCTKARIPFYGSYTEVDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM VS A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGFEIIIVDTSGRHKQEESLFEEMLAVSNAIQPDNIIFVMDATIGQACEAQAKAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT SP+I+IGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVAATNSPIIYIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + ++ ELL+K+ G FTLR MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 301 EGLIDKVNE-LKLEDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMN--DSRIMRIARGSGRQVREVME 417
M KG E+ES +++KR MT+MDSM ++ELDS + K+ + + R++R+A+GSG REV E
Sbjct: 360 MSKGSEQESMSRLKRLMTIMDSMNDDELDSRDGAKIFSKQNGRVVRVAQGSGVTEREVKE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ +Y + A + KM G+K + K G+M ++N+N Q M+K++ +L Q+GG
Sbjct: 420 LITQYTKFAAVVKKMGGIKGLFKGGDM---AKNVNPAQMAKLNQQMAKMMDPRVLHQMGG 476
Query: 470 VGGLQNLMK 478
+ GLQN+M+
Sbjct: 477 MPGLQNMMR 485
>gi|242009196|ref|XP_002425377.1| Signal recognition particle 54 kDa protein, putative [Pediculus
humanus corporis]
gi|212509171|gb|EEB12639.1| Signal recognition particle 54 kDa protein, putative [Pediculus
humanus corporis]
Length = 501
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 284/508 (55%), Positives = 380/508 (74%), Gaps = 25/508 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT VLN L +I ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALHSLSKAT-----VLNSMLKDICTALLEADVNIRLVKKLRENVRAVI 55
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG S P KGKP++IMFVGLQGSGKTTTCTK
Sbjct: 56 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKSHQPVKGKPNIIMFVGLQGSGKTTTCTK 115
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQLKQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 116 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGSYTEVDPVVIAQDGVEMFK 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QVS A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 176 KEGFEIIIVDTSGRHKQEESLFEEMLQVSNAIKPDNIIFVMDATIGQACESQARAFKEKV 235
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F KPF+S+LLGMGD
Sbjct: 236 NVGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHIDDFESFKTKPFISKLLGMGDI 295
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D EL++K+ G FTLR MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 296 EGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDF 354
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMN--DSRIMRIARGSGRQVREVME 417
+ KG E+ES A++KR MT+MDSM + ELD+ + KL SRI+R+A+G+G +EV +
Sbjct: 355 LSKGSEQESMARLKRVMTIMDSMNDGELDNRDGAKLFTKQSSRIVRVAQGAGVTEKEVKD 414
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ +Y + A + KM G+K + K G+M ++N+N Q M++++ +L+Q+GG
Sbjct: 415 LISQYTKFAAVVKKMGGIKGLFKGGDM---AKNVNQAQMTKLNQQMARMMDPRVLQQMGG 471
Query: 470 VGGLQNLMKQM-----GSTKDMMGMFGG 492
+ GLQ++M+Q+ G ++MG FGG
Sbjct: 472 MNGLQSMMRQLQQGAAGGLSNLMGGFGG 499
>gi|449274766|gb|EMC83844.1| Signal recognition particle 54 kDa protein, partial [Columba livia]
Length = 500
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 277/469 (59%), Positives = 366/469 (78%), Gaps = 9/469 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK ++IMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK L+CADT+RAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDS--RIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
+L +Y + A++ KM G+K + K G+M S+N+N ++K L Q M K
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQLAK-LNQQMAK 464
>gi|13542673|gb|AAH05543.1| Srp54c protein [Mus musculus]
Length = 500
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 278/469 (59%), Positives = 363/469 (77%), Gaps = 9/469 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDNFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++K G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNKALIEKWKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ + + RI R+ARGSG R++ E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKHPGRIQRVARGSGVSTRDIQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
+L +Y + A++ KM G+K + K G+M S+N++ M+K L Q M K
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVSQSQMAK-LNQQMAK 464
>gi|26354843|dbj|BAC41048.1| unnamed protein product [Mus musculus]
Length = 502
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 276/479 (57%), Positives = 370/479 (77%), Gaps = 9/479 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G N+R++IQ A+F EL K++DPG ++TP KGKP+VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNQRKMIQHAVFKELVKLVDPGVKAWTPTKGKPNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNAT+A+IPFYGSYTE DPV IA EGVE F+
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATQARIPFYGSYTEMDPVIIASEGVEKFQ 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRH+QE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHQQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDNFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++K G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNKALIEKWKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ + + RI R+ARGSG R++ E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKHPGRIQRVARGSGVSTRDIQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVG 471
+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMA 478
>gi|193580274|ref|XP_001951515.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
1 [Acyrthosiphon pisum]
gi|328716940|ref|XP_003246080.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
2 [Acyrthosiphon pisum]
Length = 504
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 275/489 (56%), Positives = 373/489 (76%), Gaps = 15/489 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ ++NA++I+E+VLN L +I ALL+A+V LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRGLNNASVINEEVLNSMLKDICAALLEANVNVMLVKKLRENVRNVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG S+ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKSYQPVKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+ KK WK LVCADTFRAGA+DQLKQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYYYLKKNWKTCLVCADTFRAGAYDQLKQNATKAQIPFYGSYTEVDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++I+VDTSGRHKQEA+LFEEM QVS PD ++FVMD++IGQA QA+AFK V
Sbjct: 181 KEGFEIIVVDTSGRHKQEASLFEEMLQVSNTIKPDNIVFVMDATIGQACEGQARAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
++G+V++TK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F KPFVS+LLGMGD
Sbjct: 241 NIGSVVITKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + ++ EL++K+ G FT+R MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 301 EGLIDKVNE-LKLEDNEELIEKIKHGQFTIRDMYEQFQNIMKMGPFSQIMGMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
+ KG E ES A++K+ MT+MDSM + ELD + KL RI+R+++G+G REV E
Sbjct: 360 LSKGSEMESMARLKKLMTIMDSMNDGELDHRDGAKLFTKQPGRIIRVSQGAGVTEREVRE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQ-------GMLKQIGG 469
++ +Y + A + KM G+K + K G+M S+N+N M+K+ Q +L+QIGG
Sbjct: 420 LISQYTKFAGVVKKMGGIKGLFKSGDM---SKNVNPSQMAKLNQQITKMMDPRVLQQIGG 476
Query: 470 VGGLQNLMK 478
+ GLQN+M+
Sbjct: 477 MPGLQNVMR 485
>gi|387018700|gb|AFJ51468.1| signal recognition particle 54A [Crotalus adamanteus]
Length = 456
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 272/459 (59%), Positives = 359/459 (78%), Gaps = 8/459 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK ++IMFVGLQGSGKTT+C+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTSCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADT+RAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQKKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+ E F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDVEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHM 455
+L +Y + A++ KM G+K + K G+M S+N+N +
Sbjct: 420 LLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQI 455
>gi|148298873|ref|NP_001091776.1| putative signal recognition particle 54 kDa protein [Bombyx mori]
gi|111608119|gb|ABH10803.1| putative signal recognition particle 54 kDa protein [Bombyx mori]
Length = 501
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 275/491 (56%), Positives = 369/491 (75%), Gaps = 15/491 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+Q +S ATII+E+VLN L +I ALL+ADV +LV+ ++ N++ ++
Sbjct: 1 MVLADLGRKITTALQSLSRATIINEEVLNSMLKQICAALLEADVNIRLVKNLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGKP+VIM+VGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPVKGKPNVIMYVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ +K WK LVCADTFRAGA+DQ+KQN TKA+IPFYGSYTE DPV IA GV+ FK
Sbjct: 121 LAYHYLRKNWKSCLVCADTFRAGAYDQVKQNCTKARIPFYGSYTEVDPVVIATTGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ ++IIVDTSGRHKQE +LFEEM V+ A PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 KQGLEMIIVDTSGRHKQEESLFEEMLAVATAIKPDNIIFVMDATIGQACEAQARAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPF+ +LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFIKKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+KL G FTLR MYEQFQNI+KMGP Q+ M+PGFS +L
Sbjct: 301 EGLLDKVNE-LKLDDNDELLEKLKHGQFTLRAMYEQFQNIMKMGPFSQIMGMIPGFSQDL 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES AK+K MT+MDSM ELD+ + KL + +RI R+A+G+G R+V +
Sbjct: 360 MSKGSEQESMAKLKLLMTIMDSMNEGELDNRDGAKLFSKQPTRITRVAQGAGVTERDVKD 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ +Y + A + KM G+K + K G+M ++N+N Q M+K++ +L+Q+GG
Sbjct: 420 LIAQYTKFAAVVKKMGGIKGLFKGGDM---AKNVNQTQMVKLNQQMAKMMDPRLLQQMGG 476
Query: 470 VGGLQNLMKQM 480
+ GL N+M+Q+
Sbjct: 477 MSGLHNMMRQL 487
>gi|17539958|ref|NP_501507.1| Protein F21D5.7 [Caenorhabditis elegans]
gi|3876111|emb|CAA91040.1| Protein F21D5.7 [Caenorhabditis elegans]
Length = 496
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 279/499 (55%), Positives = 371/499 (74%), Gaps = 16/499 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ +T+I+E L+ L E+ AL+++DV +LV++++ N+KK +
Sbjct: 1 MVLADLGRKIRNAIGKLGQSTVINEGELDLMLKEVCTALIESDVHIRLVKQLKDNVKKAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++ G NKRR IQ+ +FNEL K++DPG FTP KG+ +V MFVGLQGSGKTTTCTK
Sbjct: 61 NFEEIVGGANKRRYIQKTVFNELLKLVDPGVTPFTPTKGRRNVFMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY+E DPV+IA EGVE F
Sbjct: 121 MAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYSEIDPVKIAAEGVEKFT 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQEA+LFEEM QVS A PD V+FVMD+SIGQA QA+AF Q+V
Sbjct: 181 QEGFEIIIVDTSGRHKQEASLFEEMLQVSNAVTPDNVVFVMDASIGQACEAQARAFSQTV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VI+TK+D HAKGGGALSAVA TKSPVIFIGTGEH+D+FE+F K FV +LLGMGD
Sbjct: 241 DVASVIITKLDSHAKGGGALSAVAVTKSPVIFIGTGEHIDDFEIFKPKSFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G +D ++++ D + EL+ +L +G FTLR MYEQFQNI+KMGP Q+ M+PGF SE
Sbjct: 301 AGLVDMVNDIGIQDNK-ELVGRLKQGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFGSEF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELD---SSNPKLMNDSRIMRIARGSGRQVREVME 417
M KG E+ES ++KR MT+MDSM+++ELD +S +R+ R+ARGSG +EV +
Sbjct: 360 MTKGNEQESVNRLKRMMTVMDSMSDKELDHPKASELFTKEPNRVARVARGSGSHQQEVRD 419
Query: 418 MLEEYKRLAKIWSK---MKGLKIPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQI 467
+L +YK+ + + K +KGL K G+++ +NMN Q M+K++ +L+Q+
Sbjct: 420 LLAQYKKFSDVVKKIGSIKGLFNGKNGDIN--PKNMNPAKMAQLNQQMAKMMDPRVLQQM 477
Query: 468 GGVGGLQNLMKQMGSTKDM 486
GG+GGLQN+M+QM M
Sbjct: 478 GGMGGLQNMMQQMARAGKM 496
>gi|308462623|ref|XP_003093593.1| hypothetical protein CRE_02627 [Caenorhabditis remanei]
gi|308249610|gb|EFO93562.1| hypothetical protein CRE_02627 [Caenorhabditis remanei]
Length = 496
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 279/499 (55%), Positives = 369/499 (73%), Gaps = 16/499 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ T+I+E+ L+ L E+ AL+++DV +LV++++ N+KK +
Sbjct: 1 MVLADLGRKIRNAIGKLGQNTVINEEELDLMLKEVCTALIESDVHIRLVKQLKDNVKKAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++ G NKRR IQ+ +FNEL K++DPG +F P KGK +V MFVGLQGSGKTTTCTK
Sbjct: 61 NFEEIVGGANKRRYIQKTVFNELLKLVDPGVTAFQPTKGKRNVFMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY+E DPV+IA EGVE F
Sbjct: 121 MAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYSEIDPVKIAAEGVEKFT 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQEA+LFEEM QVS A PD V+FVMD+SIGQA QA+AF Q+V
Sbjct: 181 KEGFEIIIVDTSGRHKQEASLFEEMLQVSNAVTPDNVVFVMDASIGQACEAQARAFSQTV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VI+TK+D HAKGGGALSAVA TKSPVIFIGTGEH+D+FE+F K FV +LLGMGD
Sbjct: 241 DVASVIITKLDSHAKGGGALSAVAVTKSPVIFIGTGEHIDDFEIFKPKSFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G +D ++++ D + EL+ +L +G FTLR MYEQFQNI+KMGP Q+ SM+PGF E
Sbjct: 301 AGLVDMVNDIGIQDNK-ELVGRLKQGQFTLRDMYEQFQNIMKMGPFSQIMSMIPGFGPEF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVME 417
M KG E+ES ++KR MT+MDSM+++ELD + +R+ R+ARGSG +EV +
Sbjct: 360 MNKGNEQESVNRLKRMMTVMDSMSDKELDHPKASELFTKEPNRVARVARGSGSHQQEVRD 419
Query: 418 MLEEYKRLAKIWSK---MKGLKIPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQI 467
+L +YK+ + + K +KGL K G+++ +NMN Q M+K++ +L+Q+
Sbjct: 420 LLAQYKKFSDVVKKIGSIKGLFNGKNGDIN--PKNMNPAKMAQLNQQMAKMMDPRVLQQM 477
Query: 468 GGVGGLQNLMKQMGSTKDM 486
GG+GGLQN+M QM M
Sbjct: 478 GGMGGLQNMMNQMARAGKM 496
>gi|386697073|gb|AFJ21997.1| signal recognition particle protein 54k, partial [Ctenacarus sp. 1
PBK-2011]
Length = 460
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 275/457 (60%), Positives = 356/457 (77%), Gaps = 9/457 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+E+VL E L ++TRALL+ADV KLV+ ++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINEEVLEELLKQVTRALLEADVNIKLVKTLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+IQ A+F EL K++DPG ++ P K + +++MFVGLQGSGKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIQMAVFKELVKLVDPGVKAWQPAKNRTNIVMFVGLQGSGKTTTCTKMAYYYVRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KE ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIANEGVEQFTKEGFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM +S T PDL+I+VMD+SIGQA QA+AFK V VGAVIVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAISTTTQPDLIIYVMDASIGQACEGQARAFKGKVDVGAVIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E +
Sbjct: 242 HARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++LM E ES ++
Sbjct: 301 LDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLMKGASEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL + +RI R+ARGSG REV E+L +Y + A +
Sbjct: 361 LKRLMTIMDSMSDSELDSREGAKLFSKQTTRIQRVARGSGATQREVQELLTQYTKFAAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
KM G+K + K G+M ++N+N ++K L Q M K
Sbjct: 421 KKMGGIKGLFKGGDM---TKNVNPAQLAK-LNQQMAK 453
>gi|291223336|ref|XP_002731666.1| PREDICTED: signal recognition particle 54kDa-like [Saccoglossus
kowalevskii]
Length = 492
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 286/490 (58%), Positives = 366/490 (74%), Gaps = 34/490 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E VLN L+EI RALL+ADV K V++++ N++ ++
Sbjct: 1 MVLADLGRKITTALRSLSNATVINEDVLNSMLSEICRALLEADVNIKQVKKLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKRR+IQ A+F EL K++DPG ++TP KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAAGLNKRRMIQSAVFKELVKLVDPGVKAWTPVKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN ++IIVDTSGRHKQE +LFEEM QVS T+PD VI+VMD++IGQA QA+AFK+ V
Sbjct: 181 KENFEIIIVDTSGRHKQEDSLFEEMLQVSNVTSPDNVIYVMDATIGQACESQARAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VI+TK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F KPFVS+LLGMGD
Sbjct: 241 DVASVIITKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEQFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK+ E + +D EL+ KL G +V SM+PGF S+
Sbjct: 301 EGLIDKVSE-LNLDDNEELINKLKHGK-------------------KRVQSMIPGFGSDF 340
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDS-SNPKLMNDS--RIMRIARGSGRQVREVME 417
+ KG E+ES A++KR MT+MDSM +EELDS KL S RI R+ARG+G VREV E
Sbjct: 341 LSKGNEQESMARLKRLMTIMDSMNDEELDSREGAKLFTRSQGRIQRVARGAGVSVREVQE 400
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
+L +Y++ A + KM G+K + K G+M +N+N Q M+K++ +L Q+GG
Sbjct: 401 LLSQYQKFAAMVKKMGGIKGLFKGGDM---MKNVNPSQMMKLNQQMAKMMDPRILHQMGG 457
Query: 470 VGGLQNLMKQ 479
+GGLQN+MKQ
Sbjct: 458 IGGLQNMMKQ 467
>gi|386697093|gb|AFJ22007.1| signal recognition particle protein 54k, partial [Camisia segnis]
Length = 464
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 273/460 (59%), Positives = 361/460 (78%), Gaps = 9/460 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I++A++ + NATII+++VL+ L EI +ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITQALRSLGNATIINKEVLDGLLKEICKALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++TP KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWTPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTTTQPNLIIYVMDASIGQACESQARAFKNKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLVKGASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL +RI+R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIVRVSRGSGVTQREVQELLTQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
+ KM G+K + K G+M ++N+N+ M+K L Q M K
Sbjct: 422 AVVKKMGGIKGLFKGGDM---AKNVNSTQMAK-LNQQMAK 457
>gi|402589104|gb|EJW83036.1| signal recognition particle protein SRP54 [Wuchereria bancrofti]
Length = 503
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 284/498 (57%), Positives = 371/498 (74%), Gaps = 24/498 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ ATII+E LN L E+ ALL+ADV +LV++++ N+KK +
Sbjct: 1 MVLADLGRKIRNAISKLGQATIINEDELNAMLKEVCAALLEADVNVRLVKQLKDNVKKTL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ+ +F EL K++DPG F P KGKP++ MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGVNKRRLIQRCVFTELMKLVDPGVKPFQPTKGKPNIFMFVGLQGSGKTTTCTK 120
Query: 121 YAYY----HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
+ KKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA GV
Sbjct: 121 SLFLVGILLPKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVTIAANGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
+ FK++ ++IIVDTSGRHKQEA+LFEEM QVS A NP ++FVMD+SIGQA QA+AF
Sbjct: 181 DKFKEDGFEIIIVDTSGRHKQEASLFEEMLQVSNAVNPSNIVFVMDASIGQACEAQARAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
++V VG+VI+TK+D HAKGGGALSAVAAT SPVIFIGTGEH+D+FE F+VKPFV +LLG
Sbjct: 241 SETVDVGSVIITKLDSHAKGGGALSAVAATHSPVIFIGTGEHIDDFEPFEVKPFVQKLLG 300
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
MGD G + K++E+ D + EL+++L G FTLR MYEQFQNI+KMGP Q+ SM+PGF
Sbjct: 301 MGDIEGLVKKVNEIGIEDNE-ELIKRLKHGMFTLRDMYEQFQNIMKMGPFNQIMSMIPGF 359
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND------SRIMRIARGSGR 410
+ M KG E+ESQ+++K+ MT+MDSM++ ELD +PK ND R+ R+ARGSG
Sbjct: 360 GPDFMSKGNEQESQSRLKKLMTIMDSMSDAELD--HPK-ANDLFSKEPGRVQRVARGSGT 416
Query: 411 QVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQG 462
EV E+L +YK+ A + KM +K + K G+M+ ++N+N Q M+K++
Sbjct: 417 ATSEVKELLTQYKKFADMVKKMGSMKGLFKNGDMN--TKNINPSQLQKLNQQMAKMMDPR 474
Query: 463 MLKQIGGVGGLQNLMKQM 480
+L+Q+GG+GGLQN+MKQ+
Sbjct: 475 VLQQMGGMGGLQNMMKQL 492
>gi|339239467|ref|XP_003381288.1| signal recognition protein [Trichinella spiralis]
gi|316975692|gb|EFV59096.1| signal recognition protein [Trichinella spiralis]
Length = 492
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 277/478 (57%), Positives = 363/478 (75%), Gaps = 12/478 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +S+ATII+E+VL L E+ ALL+ADV +LV++++ ++K +
Sbjct: 1 MVLAELGRKIRNAIGSLSHATIINEEVLTSMLKEVCTALLEADVNIRLVKQLRESVKSQI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+++AAG NKRR+IQ+ +F EL K++DPG + P KG+P+VIMFVGLQG GKTTTCTK
Sbjct: 61 NLEEMAAGMNKRRLIQRVVFQELVKLVDPGVKQWQPTKGRPNVIMFVGLQGCGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QK+G K L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQKRGMKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+EN ++IIVDTSGRHKQE +LFEEM QV+ PD VI+VMD+SIGQA QA+AF + V
Sbjct: 181 QENFEIIIVDTSGRHKQEESLFEEMLQVANTVQPDNVIYVMDASIGQACEAQARAFHEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHA+GGGALSAVAAT SP+IFIGTGEH+D+FE F VKPFV +LLGMGD
Sbjct: 241 DVASVIVTKLDGHARGGGALSAVAATGSPIIFIGTGEHIDDFEPFKVKPFVQKLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D+ +LL+KL G FTLR MYEQFQNI+KMGP Q+ SM+PGF +
Sbjct: 301 EGLIDKVNE-LKLDENDQLLEKLKHGQFTLRDMYEQFQNIMKMGPFSQIMSMIPGFGQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVME 417
M KG E+ES ++KR MT+MDSM + ELD P + R R+ARGSG ++EV E
Sbjct: 360 MSKGNEQESAKRLKRLMTIMDSMNDNELDHLKPYELFQKQQGRFGRVARGSGTSIQEVKE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRN------MNAQHMSKVLPQGMLKQIG 468
++++YK+ A++ KM +K + K G+MS+ + N +N Q M+K++ +L+Q+G
Sbjct: 420 LMQQYKKFAEMVKKMGSIKGLFKGGDMSSKTVNPAQLAKLN-QQMAKMMDPRVLQQMG 476
>gi|289740969|gb|ADD19232.1| signal recognition particle subunit srp54 [Glossina morsitans
morsitans]
Length = 508
Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust.
Identities = 285/489 (58%), Positives = 376/489 (76%), Gaps = 15/489 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPVKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM V+ A NPD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVANAINPDNIIFVMDATIGQACEAQAKAFKGKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F +KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDMEPFKIKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G FT+R MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 301 EGLIDKVNE-LKLDGNEELLEKIKHGQFTIRDMYEQFQNIMKMGPFSQIMGMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +RI+R+A+GSG REV E
Sbjct: 360 MTKGGEQESMARIKRMMTMMDSMSDGELDNRDGAKLFSKQPTRIVRVAQGSGVLEREVKE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ Y + A + KM G+K + K+G+M ++N+N Q M+K++ ML+Q+GG
Sbjct: 420 LISHYTKFAAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQMAKMIDPRMLQQMGG 476
Query: 470 VGGLQNLMK 478
VGGLQN+M+
Sbjct: 477 VGGLQNMMR 485
>gi|386697075|gb|AFJ21998.1| signal recognition particle protein 54k, partial [Liochthonius sp.
AD1300]
Length = 464
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/460 (59%), Positives = 359/460 (78%), Gaps = 9/460 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL+ADV KLV+ ++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDSLLKEICTALLEADVNIKLVKTLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P+KG+ +++MFVGLQGSGKTTTCTK AYY+Q+KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPQKGRTNIVMFVGLQGSGKTTTCTKMAYYYQRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEVLIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S+A P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISQAVQPNLIIYVMDASIGQACESQARAFKSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQF NI+KMGP+ Q+ +M+PGF ++L+ E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPLNQILNMIPGFGADLIKGASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMNDS--RIMRIARGSGRQVREVMEMLEEYKRLA 426
A++KR MT+MDSM++ ELDS KL + R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MARLKRLMTIMDSMSDSELDSREGAKLFSKQMPRMVRVARGSGVTTREVQELLTQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
+ KM G+K + K G+M ++N+N M K L Q M K
Sbjct: 422 AVVKKMGGIKGLFKGGDM---AKNVNPAQMMK-LNQQMAK 457
>gi|225710178|gb|ACO10935.1| Signal recognition particle 54 kDa protein [Caligus rogercresseyi]
Length = 509
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 276/490 (56%), Positives = 369/490 (75%), Gaps = 14/490 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATI+DE+VLN L E+ ALL+ADV +LV +++ N++ ++
Sbjct: 1 MVLADLGRKINNALSSLSKATIVDEEVLNGMLKELCAALLEADVNIRLVAKLRENVRGVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++A G NKR+II++A++ EL K++DPG F PKKG+ +VIMFVGLQ SGKTTTCTK
Sbjct: 61 NFEEMAQGLNKRQIIKEAVYLELVKLVDPGVEPFVPKKGRANVIMFVGLQDSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+Y+QKKGWK LVCADTFRAGA+DQLKQNATKA+IPFYGSYTE DPV IA EGV TFK
Sbjct: 121 LAWYYQKKGWKACLVCADTFRAGAYDQLKQNATKARIPFYGSYTEPDPVVIANEGVNTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRH QE ALFEEM VS A NPD +IFVMD+SIGQA Q++AFK+ V
Sbjct: 181 EEGFEIIIVDTSGRHYQEDALFEEMLAVSNAVNPDNIIFVMDASIGQACEAQSRAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI++K+D HAKGGGALSAVAATKSPV+FIGTGEH+D+FE F KPFV +LLGMGD
Sbjct: 241 DVGSVIISKLDSHAKGGGALSAVAATKSPVVFIGTGEHIDDFEPFKTKPFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G + K+ E + +L+ K+ G +T+R MYEQF N++KMGP Q+ SM+PGFS
Sbjct: 301 VGLIKKVEE-CNFENNEDLINKIKHGEYTIRDMYEQFLNVMKMGPFSQILSMVPGFSQSF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM--NDSRIMRIARGSGRQVREVMEM 418
M KG E++SQAK+K+ +T+MDSM ++ELD K+ SR+ RIA G+G EV+E+
Sbjct: 360 MAKGSEQQSQAKLKKMITIMDSMNDKELDDRGAKIFMKEPSRVARIAGGAGVMEMEVLEL 419
Query: 419 LEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHM-------SKVLPQGMLKQIGGV 470
L++Y++ ++ KM G+K + K G+M S+N+N Q M +K++ +L+QIGG+
Sbjct: 420 LKQYRQFEQVVKKMGGMKGLFKGGDM---SKNVNPQQMAQLNMQIAKMMDPTVLRQIGGM 476
Query: 471 GGLQNLMKQM 480
GLQN+++Q+
Sbjct: 477 NGLQNMLRQL 486
>gi|281342878|gb|EFB18462.1| hypothetical protein PANDA_011888 [Ailuropoda melanoleuca]
Length = 488
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 277/485 (57%), Positives = 371/485 (76%), Gaps = 11/485 (2%)
Query: 17 MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQ 76
+++ I +VLN L E+ ALL+ADV KLV++++ N+K ++L+++A+G NKR++IQ
Sbjct: 1 LNSYVFIYLQVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQ 60
Query: 77 QAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVC 136
A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K AYY+Q+KGWK L+C
Sbjct: 61 HAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLIC 120
Query: 137 ADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK 196
ADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHK
Sbjct: 121 ADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHK 180
Query: 197 QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKG 256
QE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V V +VIVTK+DGHAKG
Sbjct: 181 QEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKG 240
Query: 257 GGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQ 316
GGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD G +DK++E + +D
Sbjct: 241 GGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDN 299
Query: 317 PELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRY 376
L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++ M KG E+ES A++K+
Sbjct: 300 EALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKL 359
Query: 377 MTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMK 433
MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E+L +Y + A++ KM
Sbjct: 360 MTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMG 419
Query: 434 GLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVGGLQNLMKQM--GSTKDM 486
G+K + K G+MS +S++ A Q M+K++ +L +GG+ GLQ++M+Q G+ +M
Sbjct: 420 GIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAGLQSMMRQFQQGAAGNM 479
Query: 487 MGMFG 491
GM G
Sbjct: 480 KGMMG 484
>gi|386697095|gb|AFJ22008.1| signal recognition particle protein 54k, partial [Malaconothrus
gracilis]
Length = 464
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 274/460 (59%), Positives = 359/460 (78%), Gaps = 9/460 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++TP KGK +V+MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWTPVKGKTNVVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTNEGFEVIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTTTQPNLIIYVMDASIGQACEGQARAFKNKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLVKGASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL +RI+R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIIRVSRGSGVTQREVQELLTQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
+ KM G+K + K G+M ++N+N+ M+K L Q M K
Sbjct: 422 AVVKKMGGIKGLFKGGDM---AKNVNSTQMAK-LNQQMAK 457
>gi|386697071|gb|AFJ21996.1| signal recognition particle protein 54k, partial [Stigmalychus sp.
AD1318]
Length = 464
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 275/460 (59%), Positives = 356/460 (77%), Gaps = 9/460 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINKDVLDGLLKEICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYLRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+IFVMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTAVEPNLIIFVMDASIGQACESQARAFKSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E ES
Sbjct: 303 -LKLDDNQELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLVKGASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
A++KR MTMMDSM++ ELDS KL + +RI R+ARGSG REV E+L +Y + A
Sbjct: 362 MARLKRLMTMMDSMSDNELDSREGAKLFSKQPTRIQRVARGSGVTQREVQELLTQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
+ KM G+K + K G+M ++N+N M+K L Q M K
Sbjct: 422 AVVKKMGGIKGLFKGGDM---TKNVNQAQMAK-LNQQMAK 457
>gi|386697079|gb|AFJ22000.1| signal recognition particle protein 54k, partial [Eohypochthonius
(sen. str.) sp. AD1321]
Length = 464
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 272/460 (59%), Positives = 357/460 (77%), Gaps = 9/460 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL+ADV KLV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDSLLKEICTALLEADVNIKLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++TP KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWTPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F E +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTNEGFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISNTTQPNLIIYVMDASIGQACESQARAFKSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++LM E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLMKGASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
A++KR MT+MDSM++ ELDS KL +RI R+ARGSG REV E+L +Y + A
Sbjct: 362 MARLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIQRVARGSGVTQREVQELLTQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
+ +M G+K + K G+M ++N+N M+K L Q M K
Sbjct: 422 AVVKRMGGIKGLFKGGDM---AKNVNQAQMAK-LNQQMAK 457
>gi|326435414|gb|EGD80984.1| signal recognition particle protein [Salpingoeca sp. ATCC 50818]
Length = 523
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 278/485 (57%), Positives = 367/485 (75%), Gaps = 7/485 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I A+ M++AT+IDE+V +E + +I RAL+++DVQ LV +++ NIK V
Sbjct: 1 MVLGDLGRKIKGALWNMTSATVIDEEVFDELVKDICRALIESDVQVGLVSKLRNNIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
DD AG N+RR IQ+A+F ELCK++DPG + PKK +P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 QFDDSGAGVNRRRQIQRAVFTELCKLVDPGVTPWKPKKNQPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q++GWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYQRRGWKACLVCADTFRAGAFDQLKQNATKARIPFYGSYTEIDPVVIAADGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
++ ++IIVDTSGRHKQE +LFEEM QVS A +PD +IFVMD++IGQA QAQAFK V
Sbjct: 181 QQGFEIIIVDTSGRHKQEDSLFEEMLQVSNAVDPDNIIFVMDATIGQACQGQAQAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VGAVIVTK+DGHAKGGGALSAVAATKSP+++IGTGEH+D+ E F K FVS+LLGMGD
Sbjct: 241 DVGAVIVTKLDGHAKGGGALSAVAATKSPIVYIGTGEHIDDLEPFQTKSFVSKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G M+++ E + +D+Q ++++++ G FT+R MYEQFQNI K+GP QV SM+PG +L
Sbjct: 301 QGLMERVSE-IGLDKQKDMMERIKAGVFTMRDMYEQFQNIQKLGPFSQVMSMIPGLGGDL 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKL--MNDSRIMRIARGSGRQVREVME 417
+ K E+ S ++KR+M +M SMT+EELDS N K+ M SR+ R+ARG+G EV
Sbjct: 360 LGKAGEQASSDRLKRFMVIMRSMTDEELDSDNLAKMFQMQPSRVQRVARGAGVHPGEVEA 419
Query: 418 MLEEYKRLAKIWSKMKGLKIPKKG---EMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQ 474
+L+++K+ A++ KM G+K +G +SA + Q M+K++ +LKQ+GG+ GLQ
Sbjct: 420 LLQQHKKFAELVKKMGGVKNLFQGNSDRVSAQQMSKLNQSMAKMMDPRVLKQMGGMNGLQ 479
Query: 475 NLMKQ 479
LMK+
Sbjct: 480 GLMKK 484
>gi|386697565|gb|AFJ22243.1| signal recognition particle protein 54k, partial [Xolalges sp. n.
AD600]
Length = 453
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 269/453 (59%), Positives = 354/453 (78%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELCKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E+ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCTTEEES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV ++L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQDLLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + + G+ L++N+N+ M+K+
Sbjct: 422 AVVKKMGGIKGLFRSGD---LTKNVNSVQMAKL 451
>gi|386697409|gb|AFJ22165.1| signal recognition particle protein 54k, partial [Laminosioptidae
gen. sp. AD884]
Length = 464
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 275/462 (59%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG S+ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKSWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE FKKEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFKKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQETSLFEEMMAIQSAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697407|gb|AFJ22164.1| signal recognition particle protein 54k, partial [Calamicoptes sp.
AD1253]
Length = 464
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 275/462 (59%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIILVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG S+ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKSWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE FKKEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFKKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQETSLFEEMMAIQSAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697145|gb|AFJ22033.1| signal recognition particle protein 54k, partial [Procalvolia sp.
AD1231]
Length = 453
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 266/453 (58%), Positives = 353/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL++DV +LV++++ N++K+++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALLESDVNIRLVKQLRENVRKVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+P+V+MFVGLQG GKTTTCTK AY++ KKG
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKPWQPVKGRPNVVMFVGLQGIGKTTTCTKMAYHYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKTALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFIDENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A PDL+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAVQPDLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT+SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATQSPIIFIGTGEHIDEFEAFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ ++ ELL+KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLEDNEELLEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKNTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+K+KR MT+MDSM + ELDS KL + +R +R+ARG+G ++ EV E++ +Y + A
Sbjct: 362 MSKLKRMMTIMDSMADSELDSREGAKLFSKQPTRAVRVARGAGVRLCEVQELISQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + + G+ +S+N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFRAGD---ISKNVNPTQMAKL 451
>gi|194750277|ref|XP_001957554.1| GF23972 [Drosophila ananassae]
gi|190624836|gb|EDV40360.1| GF23972 [Drosophila ananassae]
Length = 508
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 282/489 (57%), Positives = 376/489 (76%), Gaps = 15/489 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNAMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPIKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM V+ A NPD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVANAVNPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q+ +M+PGFS +
Sbjct: 301 EGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQIMNMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +R +R+A+G+G REV E
Sbjct: 360 MTKGGEQESMARIKRMMTMMDSMSDNELDNRDGAKLFSKQPTRSVRVAQGAGVLEREVKE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ Y + A + KM G+K + K+G+M ++N+N Q M+K++ ML+Q+GG
Sbjct: 420 LIAHYTKFAAVVKKMGGVKGLFKQGDM---TKNVNPNQMAKLNQQMAKMIDPRMLQQMGG 476
Query: 470 VGGLQNLMK 478
VGGLQN+M+
Sbjct: 477 VGGLQNMMR 485
>gi|386697689|gb|AFJ22305.1| signal recognition particle protein 54k, partial [Alabidocarpus
intercalatus]
Length = 464
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 275/462 (59%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNIIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ LS+N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LSKNVNPAQMAK-LNQQMSKMI 459
>gi|386697569|gb|AFJ22245.1| signal recognition particle protein 54k, partial [Ingrassia sp.
AD1008]
Length = 464
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/462 (59%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA GVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASGGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A PDLVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIEPDLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M++ L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAR-LNQQMAKMI 459
>gi|268564306|ref|XP_002647138.1| Hypothetical protein CBG16436 [Caenorhabditis briggsae]
Length = 496
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 277/499 (55%), Positives = 368/499 (73%), Gaps = 16/499 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ T+I+E+ L+ L E+ AL+++DV +LV++++ N+K +
Sbjct: 1 MVLADLGRKIRNAIGKLGQNTVINEEELDLMLKEVCTALIESDVHIRLVKQLKDNVKNAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++ G NKRR IQ+ +FNEL K++DPG FTP KGK +V MFVGLQGSGKTTTC+K
Sbjct: 61 NFEEIVGGANKRRYIQKTVFNELLKLVDPGVTPFTPTKGKRNVFMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY+E DPV+IA EGVE F
Sbjct: 121 MAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYSEIDPVKIAAEGVEKFT 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQEA+LFEEM QVS A PD V+FVMD+SIGQA QA+AF Q+V
Sbjct: 181 KEGFEIIIVDTSGRHKQEASLFEEMLQVSNAVTPDNVVFVMDASIGQACEAQARAFSQTV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VI+TK+D HAKGGGALSAVA TKSPVIFIGTGEH+D+FE+F K FV +LLGMGD
Sbjct: 241 DVASVIITKLDSHAKGGGALSAVAVTKSPVIFIGTGEHIDDFEIFKPKSFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G +D ++++ D + EL+ +L +G FTLR MYEQFQNI+KMGP Q+ M+PGF E
Sbjct: 301 AGLVDMVNDIGISDNK-ELVGRLKQGQFTLRDMYEQFQNIMKMGPFSQIMVMIPGFGPEF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVME 417
M KG E+ES ++KR MT+MDSM+++ELD + +R+ R+ARGSG +EV +
Sbjct: 360 MNKGNEQESVNRLKRMMTVMDSMSDKELDHPKASELFTKEPNRVARVARGSGCFQQEVRD 419
Query: 418 MLEEYKRLAKIWSK---MKGLKIPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQI 467
+L +YK+ + + K +KGL K G+++ +NMN Q M+K++ +L+Q+
Sbjct: 420 LLSQYKKFSDVVKKIGSIKGLFNGKNGDIN--PKNMNPAKMAQLNQQMAKMMDPRVLQQM 477
Query: 468 GGVGGLQNLMKQMGSTKDM 486
GG+GGLQN+M+QM M
Sbjct: 478 GGMGGLQNMMQQMARAGKM 496
>gi|209879780|ref|XP_002141330.1| signal recognition particle protein SRP54 [Cryptosporidium muris
RN66]
gi|209556936|gb|EEA06981.1| signal recognition particle protein SRP54, putative
[Cryptosporidium muris RN66]
Length = 497
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/496 (54%), Positives = 368/496 (74%), Gaps = 6/496 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG ++ AI+++ +ATI+DE ++ CL EI ALLQADV KLV +++ NIKK +
Sbjct: 1 MVLAELGTQLTAAIKKLQSATIVDEATIDNCLREIATALLQADVNVKLVAQLRNNIKKAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +KRR+IQ ++ EL K+L P + + P K K ++++FVGLQGSGKTTTCTK
Sbjct: 61 SSQGNLQVASKRRLIQASVVEELVKILTPQRKPYVPTKDKCNIVVFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+Q+KGWK ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV+IA +GV+ F+
Sbjct: 121 YAHYYQRKGWKTALVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVKIASDGVKEFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+N DLIIVDTSGRHKQE++LF EM+Q+ +T PD V+FVMDS IGQA +DQA AF +
Sbjct: 181 DDNYDLIIVDTSGRHKQESSLFVEMQQIVLSTKPDNVVFVMDSHIGQACYDQALAFCSVI 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT +P+IFIGTGEH D+FE F+ + FVSRLLG+GD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVAATSAPIIFIGTGEHFDDFEPFETRGFVSRLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SG KI+EVVP+D+QPE++ ++ +G FTLR MYEQFQN+L MG + SM+PGF
Sbjct: 301 SGLFAKINEVVPIDKQPEMVNRIVQGIFTLRDMYEQFQNMLNMGSPSALLSMIPGFGPNF 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ K E+ +++R+M +MDSMT+ ELD N + M SRI R+A GSG V EV ++L
Sbjct: 361 LAKEDEQAGITRLRRFMVIMDSMTDAELD--NTESMISSRITRVAIGSGTNVCEVQDLLN 418
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMN-AQHMSKVLPQGMLKQIGGVGGLQNLMKQ 479
+YK AK+ ++ + + KKG+M +L ++ Q M +++ MLKQ+GG + N+MK+
Sbjct: 419 QYKTFAKMVGQIGKMGLGKKGDMGSLKNPLHFMQKMQRMIDPRMLKQLGGSNSMFNMMKE 478
Query: 480 ---MGSTKDMMGMFGG 492
M ++ D+ +F G
Sbjct: 479 MEKMENSPDLQKLFRG 494
>gi|386697077|gb|AFJ21999.1| signal recognition particle protein 54k, partial [Brachychthoniidae
gen. sp. 3 AD1301]
Length = 464
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 271/460 (58%), Positives = 358/460 (77%), Gaps = 9/460 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL+ADV KLV+ ++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDSLLKEICTALLEADVNIKLVKTLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYLRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S+A P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISQAVQPNLIIYVMDASIGQACESQARAFKGKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQF NI+KMGP+ Q+ +M+PGF ++L+ E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPLNQILNMIPGFGADLIKGASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMNDS--RIMRIARGSGRQVREVMEMLEEYKRLA 426
A++KR MT+MDSM++ ELDS KL + R++R+ARGSG +EV E+L +Y + A
Sbjct: 362 MARLKRLMTIMDSMSDSELDSREGAKLFSKQAPRMVRVARGSGVTTKEVQELLTQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
+ KM G+K + K G+M ++N+N M+K L Q M K
Sbjct: 422 AVVKKMGGIKGLFKGGDM---AKNVNPAQMAK-LNQQMAK 457
>gi|386697559|gb|AFJ22240.1| signal recognition particle protein 54k, partial [Alloptes
calidridis]
Length = 464
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/462 (59%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQARAFKEKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R+ R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRMXRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697495|gb|AFJ22208.1| signal recognition particle protein 54k, partial [Euroglyphus
maynei]
Length = 464
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/462 (59%), Positives = 356/462 (77%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP S+ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKSWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697101|gb|AFJ22011.1| signal recognition particle protein 54k, partial [Trhypochthonius
cladonicola]
Length = 464
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 271/460 (58%), Positives = 358/460 (77%), Gaps = 9/460 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTTTQPNLIIYVMDASIGQACESQARAFKNKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLVKGASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL +RI+R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIIRVSRGSGVTQREVQELLTQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
+ KM G+K + K G+M ++N+N+ M+K L Q M K
Sbjct: 422 AVVKKMGGIKGLFKGGDM---AKNVNSTQMAK-LNQQMAK 457
>gi|386697337|gb|AFJ22129.1| signal recognition particle protein 54k, partial [Coraciacarus
americanus]
Length = 453
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 352/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKTALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFEVEPFISKLLGMGDIKGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCATEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697497|gb|AFJ22209.1| signal recognition particle protein 54k, partial [Hirstia
chelidonis]
Length = 464
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/462 (59%), Positives = 356/462 (77%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPTKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697081|gb|AFJ22001.1| signal recognition particle protein 54k, partial [Hypochthonius
luteus]
Length = 464
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/460 (59%), Positives = 355/460 (77%), Gaps = 9/460 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL++ADV KLV+ ++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDSLLKEICTALIEADVNIKLVKGLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++TP KG+ +VIMFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWTPVKGRTNVIMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIAAEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQ+ QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISNTTQPNLIIYVMDASIGQSCEAQARAFKGKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++LM E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFSQILNMIPGFGADLMRGASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMNDS--RIMRIARGSGRQVREVMEMLEEYKRLA 426
A++KR MT+MDSM++ ELDS KL RI R+ARGSG REV E+L +Y + A
Sbjct: 362 MARLKRLMTIMDSMSDSELDSREGAKLFTKQPLRIQRVARGSGVTQREVQELLTQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
+ +M G+K + K G+M ++N+N M+K L Q M K
Sbjct: 422 AVVKRMGGIKGLFKGGDM---AKNVNQAQMAK-LNQQMAK 457
>gi|386697405|gb|AFJ22163.1| signal recognition particle protein 54k, partial [Rallicoptes aff.
gallinulae AD992]
Length = 460
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/459 (59%), Positives = 353/459 (76%), Gaps = 9/459 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDPG S+ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFKELVKLLDPGVKSWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE FKKEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFKKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE +LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQETSLFEEMMAIQSAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES ++
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A +
Sbjct: 361 LKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKFAAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 KKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 455
>gi|386697203|gb|AFJ22062.1| signal recognition particle protein 54k, partial [Horstia sp.
AD1229]
Length = 464
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/462 (59%), Positives = 356/462 (77%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + N+TII+++VL+ L EI AL+++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTAIRSLGNSTIINQEVLDNMLKEICAALIESDVNIQLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+FNEL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFNELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATGSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM + ELDS KL + +RI+RIARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMADSELDSREGTKLFSKQPTRIVRIARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M + I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMARMI 459
>gi|386697201|gb|AFJ22061.1| signal recognition particle protein 54k, partial [Horstia sp.
AD301]
Length = 453
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/453 (59%), Positives = 352/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + N+TII+++VL+ L EI AL+++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTAIRSLGNSTIINQEVLDNMLKEICAALIESDVNIQLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+FNEL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFNELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATGSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM + ELDS KL + +RI+RIARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMADSELDSREGTKLFSKQPTRIVRIARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697505|gb|AFJ22213.1| signal recognition particle protein 54k, partial [Dermatophagoides
pteronyssinus]
gi|386697507|gb|AFJ22214.1| signal recognition particle protein 54k, partial [Dermatophagoides
evansi]
Length = 464
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 356/462 (77%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697571|gb|AFJ22246.1| signal recognition particle protein 54k, partial [Vingrassia
velata]
Length = 464
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 275/462 (59%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKAKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697667|gb|AFJ22294.1| signal recognition particle protein 54k, partial [Prolistrophorus
sp. n. AD725]
Length = 464
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/462 (59%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSSENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A PDLVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPDLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGPELAKCASETES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697491|gb|AFJ22206.1| signal recognition particle protein 54k, partial [Gymnoglyphus
longior]
Length = 464
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/462 (59%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697555|gb|AFJ22238.1| signal recognition particle protein 54k, partial [Alloptes
obtusolobus]
Length = 464
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/462 (59%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A +P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAISPNLVIYVMDASIGQACESQARAFKEKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDPELDSREGAKLFTKQPTRIVRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|195441672|ref|XP_002068627.1| GK20323 [Drosophila willistoni]
gi|194164712|gb|EDW79613.1| GK20323 [Drosophila willistoni]
Length = 508
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 281/489 (57%), Positives = 376/489 (76%), Gaps = 15/489 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNAMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPVKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM V+ A +PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVANAVSPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q+ +M+PGFS +
Sbjct: 301 EGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQIMNMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++KR MTMMDSM++ ELD+ + KL + +R +R+A+GSG REV E
Sbjct: 360 MTKGCEQESMARMKRMMTMMDSMSDSELDNRDGAKLFSKQPTRCVRVAQGSGVIEREVKE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ Y + A + KM G+K + K+G+M ++N+N Q M+K++ ML+Q+GG
Sbjct: 420 LIAHYTKFAAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQMAKMIDPRMLQQMGG 476
Query: 470 VGGLQNLMK 478
VGGLQN+M+
Sbjct: 477 VGGLQNMMR 485
>gi|386697325|gb|AFJ22123.1| signal recognition particle protein 54k, partial [Gabucinia sp. B
PBK-2011]
Length = 464
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 271/462 (58%), Positives = 356/462 (77%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + + G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFRSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697511|gb|AFJ22216.1| signal recognition particle protein 54k, partial [Onychalges sp. 1
PBK-2011]
Length = 464
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDP ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMSAVFQELCKLLDPEVKAWQPIKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A PDLVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPDLVIYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697177|gb|AFJ22049.1| signal recognition particle protein 54k, partial [Canestrinia sp.
n. AD775]
Length = 464
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 271/462 (58%), Positives = 357/462 (77%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIVLVKKLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA +QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACENQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RIMR++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIMRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M + I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMARMI 459
>gi|386697415|gb|AFJ22168.1| signal recognition particle protein 54k, partial [Megninia
ginglymura]
Length = 464
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/462 (59%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV ++L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQDLLNQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697677|gb|AFJ22299.1| signal recognition particle protein 54k, partial [Listrophorus
squamiferus]
Length = 464
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/462 (59%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG S+ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKSWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGPELAKCASETES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697537|gb|AFJ22229.1| signal recognition particle protein 54k, partial [Calcealges sp. n.
AD770]
Length = 464
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/462 (59%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEPQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPSQMAK-LNQQMAKMI 459
>gi|386697561|gb|AFJ22241.1| signal recognition particle protein 54k, partial [Ingrassiella sp.
AD765]
Length = 464
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFNEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELC +LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY KKG
Sbjct: 63 NKRRMIMMAVFQELCNILDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYFMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D +L++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEDLIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + + G+ L++N+N+ M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFRSGD---LTKNVNSAQMAK-LNQQMAKMI 459
>gi|386697147|gb|AFJ22034.1| signal recognition particle protein 54k, partial
[Thalassophagacarus faime]
Length = 453
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/453 (58%), Positives = 353/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALLESDVNIRLVKQLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+P+V+MFVGLQG GKTTTCTK AY++ KKG
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKPWQPVKGRPNVVMFVGLQGIGKTTTCTKMAYHYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F +N +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFIDDNFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A PDL+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAVQPDLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +++ ELL+KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLEENGELLEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKNTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
AK+KR MT+MDSM + ELDS KL + SR +R+ARG+G ++ EV E++ +Y + A
Sbjct: 362 MAKLKRMMTIMDSMADSELDSREGAKLFSKQPSRAVRVARGAGVRLIEVQELISQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + + G+ +++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFRAGD---ITKNVNPTQMAKL 451
>gi|386697173|gb|AFJ22047.1| signal recognition particle protein 54k, partial [Afrocanestrinia
sp. n. AD456]
Length = 464
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/462 (58%), Positives = 356/462 (77%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RIMR++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGSKLFSKQPTRIMRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M + I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMARMI 459
>gi|386697601|gb|AFJ22261.1| signal recognition particle protein 54k, partial [Proctophyllodes
sp. n. AD681]
gi|386697603|gb|AFJ22262.1| signal recognition particle protein 54k, partial [Proctophyllodes
stylifer]
gi|386697605|gb|AFJ22263.1| signal recognition particle protein 54k, partial [Proctophyllodes
reguli]
gi|386697607|gb|AFJ22264.1| signal recognition particle protein 54k, partial [Proctophyllodes
hipposideros]
Length = 464
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/453 (59%), Positives = 351/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N+ MSK+
Sbjct: 422 AVVKKMGGIKGLFKTGD---LAKNVNSAQMSKL 451
>gi|386697327|gb|AFJ22124.1| signal recognition particle protein 54k, partial [Capitolichus sp.
AD1240]
Length = 464
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINQEVLDSLLKEICTALIESDVNIILVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697563|gb|AFJ22242.1| signal recognition particle protein 54k, partial [Xolalgoides sp.
AD649]
Length = 453
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/453 (59%), Positives = 349/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICAALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVQAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT+SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATQSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGQELAKNASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGCGVTQREVQELLTQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + + G+ LS+N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFRSGD---LSKNVNPAQMAKL 451
>gi|386697069|gb|AFJ21995.1| signal recognition particle protein 54k, partial [Alicorhagia sp.
AD1316]
Length = 464
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/460 (58%), Positives = 354/460 (76%), Gaps = 9/460 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINKEVLDGLLKEICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+P+++MFVGLQGSGKTTTCTK +YY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRPNIVMFVGLQGSGKTTTCTKMSYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++I+V
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIAQEGVEKFTNEGFEIIVV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S P+L+IFVMD+SIGQA QA+AF V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISNTVQPNLIIFVMDASIGQACESQAKAFSSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATGSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D+ EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E ES
Sbjct: 303 -LKLDENEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLVKGASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS K+ +RI R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRLMTIMDSMSDSELDSKEGAKIFTKQATRIQRVARGSGVTQREVQELLTQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
+ KM G+K + K G+M ++N+N M K L Q M K
Sbjct: 422 AVVKKMGGIKGLFKGGDM---TKNVNQAQMMK-LNQQMAK 457
>gi|125980516|ref|XP_001354282.1| GA18336 [Drosophila pseudoobscura pseudoobscura]
gi|195167799|ref|XP_002024720.1| GL22620 [Drosophila persimilis]
gi|54642588|gb|EAL31335.1| GA18336 [Drosophila pseudoobscura pseudoobscura]
gi|194108125|gb|EDW30168.1| GL22620 [Drosophila persimilis]
Length = 508
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 280/489 (57%), Positives = 372/489 (76%), Gaps = 15/489 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK ++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPIKGKANIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM V+ A NPD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVANAVNPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q+ +M+PGFS +
Sbjct: 301 EGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQIMNMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLM--NDSRIMRIARGSGRQVREVME 417
M KG E ES A+IKR MTMMDSM++ ELD+ + KL +R R+A+G+G RE E
Sbjct: 360 MTKGGEAESMARIKRMMTMMDSMSDNELDNRDGAKLFIKQPTRCTRVAQGAGVLEREAKE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ Y + A + KM G+K + K+G+M ++N+N Q M+K++ ML+Q+GG
Sbjct: 420 LIAHYTKFAAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQMAKMIDPRMLQQMGG 476
Query: 470 VGGLQNLMK 478
VGGLQN+M+
Sbjct: 477 VGGLQNMMR 485
>gi|195127379|ref|XP_002008146.1| GI13333 [Drosophila mojavensis]
gi|193919755|gb|EDW18622.1| GI13333 [Drosophila mojavensis]
Length = 508
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 281/489 (57%), Positives = 374/489 (76%), Gaps = 15/489 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ L+ L EI ALL+ADV + V++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALSAMLKEICAALLEADVNIRQVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPVKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM V+ A NPD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVANAVNPDNIIFVMDATIGQACEAQAKAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNILKMGP Q+ +M+PGFS +
Sbjct: 301 EGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMYEQFQNILKMGPFSQIMNMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +R R+A G+G REV E
Sbjct: 360 MTKGGEQESMARIKRMMTMMDSMSDSELDNRDGAKLFSKQPTRCTRVAHGAGVIEREVKE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ Y + A + KM G+K + K+G+M ++N+N Q M+K++ ML+Q+GG
Sbjct: 420 LIAHYTKFAAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQMAKMIDPRMLQQMGG 476
Query: 470 VGGLQNLMK 478
VGGLQN+M+
Sbjct: 477 VGGLQNMMR 485
>gi|386697099|gb|AFJ22010.1| signal recognition particle protein 54k, partial [Trhypochthonius
americanus]
Length = 460
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/457 (59%), Positives = 356/457 (77%), Gaps = 9/457 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTNEGFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAISTTTQPNLIIYVMDASIGQACEAQARAFKNKVDVGAVIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E +
Sbjct: 242 HARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E ES ++
Sbjct: 301 LDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLVKGASEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL +RI+R++RGSG REV E+L +Y + A +
Sbjct: 361 LKRLMTIMDSMSDSELDSREGAKLFTKQPTRIIRVSRGSGVTQREVQELLTQYTKFAAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
KM G+K + K G+M ++N+N+ M+K L Q M K
Sbjct: 421 KKMGGIKGLFKGGDM---AKNVNSTQMAK-LNQQMAK 453
>gi|386697175|gb|AFJ22048.1| signal recognition particle protein 54k, partial [Canestrinia
pentodontis]
Length = 453
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 352/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RIMR++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIMRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697509|gb|AFJ22215.1| signal recognition particle protein 54k, partial [Onychalges sp. 2
PBK-2011]
Length = 464
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/462 (58%), Positives = 356/462 (77%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697333|gb|AFJ22127.1| signal recognition particle protein 54k, partial [Piciformobia sp.
AD1182]
Length = 464
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P + P KGKP+VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPVWQPVKGKPNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KE D+IIV
Sbjct: 123 YKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKEGFDIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK+ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKEKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVN- 301
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 302 ALKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697691|gb|AFJ22306.1| signal recognition particle protein 54k, partial [Schizocarpus sp.
F nr. subvirgulatus AD1262]
Length = 464
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/462 (59%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGKP+VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKPNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE+ LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESXLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG EV ++L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQNEVQKLLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697157|gb|AFJ22039.1| signal recognition particle protein 54k, partial [Hyadesia aff.
curassaviensis AD605]
Length = 453
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 351/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACESQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI R+A+G+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIARVAKGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPNQMAKL 451
>gi|386697443|gb|AFJ22182.1| signal recognition particle protein 54k, partial [Heteropsorus sp.
AD840]
Length = 464
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/462 (59%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG S+ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKSWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELMEKLKHGEFTIRDMYEQLTNIMKMGPFNQLLNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDTELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697165|gb|AFJ22043.1| signal recognition particle protein 54k, partial [Achaetodactylus
leleupi]
Length = 464
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI +AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVRLLDPGVKPWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQENSLFEEMLAISAAVQPNLIVYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697441|gb|AFJ22181.1| signal recognition particle protein 54k, partial [Heteropsorus sp.
AD869]
Length = 464
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/462 (59%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELMEKLKHGEFTIRDMYEQLTNIMKMGPFNQLLNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDTELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697091|gb|AFJ22006.1| signal recognition particle protein 54k, partial [Gehypochthonius
sp. AD1358]
Length = 464
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/460 (58%), Positives = 358/460 (77%), Gaps = 9/460 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPIKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIAAEGVDKFTNENFEVIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S + P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISNSVQPNLIIYVMDASIGQACEPQARAFKSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D+ EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++LM E ES
Sbjct: 303 -LKLDENEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLMKGASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRLMTIMDSMSDSELDSREGAKLFSKQPTRIARVARGAGVTFREVQELLTQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
+ KM G+K + K G+M ++N+N M K L Q M K
Sbjct: 422 AVVKKMGGIKGLFKGGDM---AKNVNPAQMMK-LNQQMAK 457
>gi|386697307|gb|AFJ22114.1| signal recognition particle protein 54k, partial [Aniibius
drepanophorus]
Length = 464
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/462 (58%), Positives = 356/462 (77%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICMALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRVVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKTGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697169|gb|AFJ22045.1| signal recognition particle protein 54k, partial [Chaetodactylus
krombeini]
Length = 453
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 351/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI +AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVRLLDPGVKPWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQENSLFEEMLAISAAVQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697343|gb|AFJ22132.1| signal recognition particle protein 54k, partial [Fringillosphaera
sp. AD781]
Length = 464
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/462 (59%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELIKLLDPGVKVWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRIMTIMDSMSDSELDSREGAKLFCKQPTRIVRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697345|gb|AFJ22133.1| signal recognition particle protein 54k, partial [Apionacaridae
gen. sp. AD1423]
Length = 464
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/462 (59%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELIKLLDPGVKVWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFCKQPTRIVRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697535|gb|AFJ22228.1| signal recognition particle protein 54k, partial [Steatacarus
bifiditibia]
Length = 464
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/462 (59%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPQKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEGQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRMVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPTQMAK-LNQQMAKMI 459
>gi|386697543|gb|AFJ22232.1| signal recognition particle protein 54k, partial [Trouessartia
kratochvili]
gi|386697545|gb|AFJ22233.1| signal recognition particle protein 54k, partial [Trouessartia
reguli]
Length = 464
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLNQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M++ L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAR-LNQQMAKMI 459
>gi|386697179|gb|AFJ22050.1| signal recognition particle protein 54k, partial [Arrunsithiana nr.
spicantis AD764]
Length = 464
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 356/462 (77%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIILVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYLRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RIMRI+RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIMRISRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M + I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMARMI 459
>gi|386697083|gb|AFJ22002.1| signal recognition particle protein 54k, partial [Eniochthonius sp.
AD1066]
Length = 459
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/457 (59%), Positives = 354/457 (77%), Gaps = 9/457 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L +I ALL+ADV KLV+ ++ N++ +++ +++AAG NKR
Sbjct: 2 ALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKTLRENVRSVIDFEEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+IQ A+F EL K++DPG +++P KG+ +V+MFVGLQGSGKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIQMAVFKELVKLVDPGVKAWSPVKGRTNVVMFVGLQGSGKTTTCTKMAYYYVRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAISTTTQPNLIIYVMDASIGQACESQARAFKSKVDVGAVIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E +
Sbjct: 242 HARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E ES ++
Sbjct: 301 LDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLIKGASEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL SRI R+ARGSG REV E+L +Y + A +
Sbjct: 361 LKRLMTIMDSMSDSELDSREGAKLFTKQPSRIQRVARGSGVTQREVQELLTQYTKFAAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
KM G+K + K G+M ++N+N M+K L Q M K
Sbjct: 421 KKMGGIKGLFKGGDM---AKNVNPAQMAK-LNQQMAK 453
>gi|386697631|gb|AFJ22276.1| signal recognition particle protein 54k, partial [Montesauria sp.
n. AD617]
Length = 453
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/453 (59%), Positives = 349/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM + ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ +S+N+N+ M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---ISKNVNSAQMLKL 451
>gi|386697681|gb|AFJ22301.1| signal recognition particle protein 54k, partial [Listrophorus
validus]
Length = 453
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/453 (59%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG S+ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKSWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGPELAKCASETES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697539|gb|AFJ22230.1| signal recognition particle protein 54k, partial [Trouessartia
rubecula]
Length = 464
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLNQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M++ L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPVQMAR-LNQQMAKMI 459
>gi|386697553|gb|AFJ22237.1| signal recognition particle protein 54k, partial [Trouessartia sp.
n. AD616]
Length = 453
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/453 (59%), Positives = 351/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLNQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697693|gb|AFJ22307.1| signal recognition particle protein 54k, partial [Schizocarpus sp.
E nr. subvirgulatus AD1267]
Length = 464
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/462 (59%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGKP+VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKPNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG EV ++L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQNEVQKLLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697679|gb|AFJ22300.1| signal recognition particle protein 54k, partial [Metalistrophorus
pagenstecheri]
Length = 464
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/462 (59%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGPELAKCASETES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKVI 459
>gi|386697493|gb|AFJ22207.1| signal recognition particle protein 54k, partial [Gymnoglyphus osu]
Length = 460
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/459 (59%), Positives = 353/459 (76%), Gaps = 9/459 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I +A+F ELCK+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMRAVFQELCKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQARAFKSKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES ++
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A +
Sbjct: 361 LKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFAAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 KKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 455
>gi|386697613|gb|AFJ22267.1| signal recognition particle protein 54k, partial [Platyacarus sp.
AD1238]
Length = 464
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/453 (59%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSRGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N+ M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|386697499|gb|AFJ22210.1| signal recognition particle protein 54k, partial [Sturnophagoides
bakeri]
Length = 453
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 352/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPMKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697097|gb|AFJ22009.1| signal recognition particle protein 54k, partial [Afronothrus sp.
AD453]
Length = 453
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 265/453 (58%), Positives = 353/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L ++ ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDVCTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++I+V
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIVV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTTTQPNLIIYVMDASIGQACEAQARAFKSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFSQILNMIPGFGADLVKGASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL +RI R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIARVSRGSGVTQREVQELLTQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+M ++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKGGDM---AKNVNPTQMAKL 451
>gi|386697329|gb|AFJ22125.1| signal recognition particle protein 54k, partial [Capitolichus sp.
C PBK-2011]
gi|386697331|gb|AFJ22126.1| signal recognition particle protein 54k, partial [Capitolichus sp.
A PBK-2011]
Length = 464
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/462 (58%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPIWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRMVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697585|gb|AFJ22253.1| signal recognition particle protein 54k, partial [Proctophyllodes
aff. detruncatus AD715]
Length = 464
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/453 (59%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVARGAGVTQREVHELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N+ M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|195376317|ref|XP_002046943.1| GJ13160 [Drosophila virilis]
gi|194154101|gb|EDW69285.1| GJ13160 [Drosophila virilis]
Length = 508
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 280/489 (57%), Positives = 375/489 (76%), Gaps = 15/489 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ L+ L EI ALL+ADV + V++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALSAMLKEICAALLEADVNIRQVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPVKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM VS A +PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q+ +M+PGFS +
Sbjct: 301 EGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQIMNMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +R +R+A G+G REV E
Sbjct: 360 MTKGGEQESMARIKRMMTMMDSMSDSELDNRDGAKLFSKQPTRCIRVAHGAGVIEREVKE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ Y + A + KM G+K + K+G+M ++N+N Q M+K++ ML+Q+GG
Sbjct: 420 LIAHYTKFAAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQMAKMIDPRMLQQMGG 476
Query: 470 VGGLQNLMK 478
VGGLQN+M+
Sbjct: 477 VGGLQNMMR 485
>gi|386697421|gb|AFJ22171.1| signal recognition particle protein 54k, partial [Diplaegidia sp. A
PBK-2011]
Length = 464
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/453 (59%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+E L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDELLKEICAALIESDVNIMLVKKLRDNVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENXEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIAKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + +
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVHELLSQYTKFS 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 GVVKKMGGIKGLXKSGD---LAKNVNPAQMAKL 451
>gi|386697347|gb|AFJ22134.1| signal recognition particle protein 54k, partial [Bdellorhynchus
sp. AD706]
Length = 464
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/462 (58%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +MLPGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMLPGFGAELAKCTTEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + +
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYSKFS 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+NA M++ L Q M + I
Sbjct: 422 AMVKKMGGIKGLFKSGD---LAKNVNANQMAQ-LNQQMARMI 459
>gi|386697583|gb|AFJ22252.1| signal recognition particle protein 54k, partial [Proctophyllodes
detruncatus]
Length = 453
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/453 (59%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVARGAGVTQREVHELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N+ M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|386697457|gb|AFJ22189.1| signal recognition particle protein 54k, partial [Picalgoides sp.
AD1159]
Length = 464
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697185|gb|AFJ22053.1| signal recognition particle protein 54k, partial [Chortoglyphus
arcuatus]
Length = 464
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIILVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++TP KGK +VIMFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKAWTPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKGTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM + ELDS K + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMADCELDSREGAKFFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
++ KM G+K + K G+ LS+N+N M++ L Q M + I
Sbjct: 422 QVVKKMGGIKGLFKSGD---LSKNVNPAQMAR-LNQQMARMI 459
>gi|386697615|gb|AFJ22268.1| signal recognition particle protein 54k, partial [Platyacarus sp.
n. AD1155]
Length = 463
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/453 (59%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSRGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N+ M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|386697281|gb|AFJ22101.1| signal recognition particle protein 54k, partial [Hyperaspidacarus
sp. AD1206]
Length = 464
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/462 (58%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRVVRVARGSGVTQREVHELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKTGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697503|gb|AFJ22212.1| signal recognition particle protein 54k, partial [Dermatophagoides
sp. n. AD1210]
Length = 464
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/462 (58%), Positives = 356/462 (77%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AY++ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697119|gb|AFJ22020.1| signal recognition particle protein 54k, partial [Histiostomatidae
gen. sp. AD655]
Length = 464
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/453 (59%), Positives = 352/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NAT+I+++VL+ L EI ALL+ADV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSAIKSLGNATVINQEVLDNMLKEICAALLEADVNILLVKKLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+P+V+MFVGLQG GKTTT TK AY++ KKG
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKQWQPVKGRPNVVMFVGLQGIGKTTTVTKLAYHYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVTKFAKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM + AT+PDLV++VMD+SIGQA QA+AFK V +GA+IVTK
Sbjct: 183 DTSGRHKQENSLFEEMLAIQAATSPDLVVYVMDASIGQACEAQAKAFKSKVDIGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ ++ EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF EL E ES
Sbjct: 303 -LKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPELSKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLA 426
A++KR MT+MDSM++ ELDS KL N +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 AARLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIVRVARGAGVFRREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
++ KM G+K + K+G+ L++N+N M+K+
Sbjct: 422 QMVKKMGGMKGLFKQGD---LTKNVNPMQMAKL 451
>gi|386697581|gb|AFJ22251.1| signal recognition particle protein 54k, partial [Proctophyllodes
scolopacinus]
gi|386697589|gb|AFJ22255.1| signal recognition particle protein 54k, partial [Joubertophyllodes
modularis]
gi|386697591|gb|AFJ22256.1| signal recognition particle protein 54k, partial [Joubertophyllodes
proximus]
gi|386697593|gb|AFJ22257.1| signal recognition particle protein 54k, partial [Joubertophyllodes
ampulaceus]
gi|386697595|gb|AFJ22258.1| signal recognition particle protein 54k, partial [Proctophyllodes
clavatus]
gi|386697597|gb|AFJ22259.1| signal recognition particle protein 54k, partial [Proctophyllodes
spini]
gi|386697619|gb|AFJ22270.1| signal recognition particle protein 54k, partial [Nycteridocaulus
sp. AD1194]
gi|386697621|gb|AFJ22271.1| signal recognition particle protein 54k, partial [Proctophyllodinae
sp. AD1212]
gi|386697623|gb|AFJ22272.1| signal recognition particle protein 54k, partial [Nycteridocaulus
sp. AD1243]
gi|386697625|gb|AFJ22273.1| signal recognition particle protein 54k, partial [Nycteridocaulus
sp. AD1176]
Length = 464
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/453 (59%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N+ M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|386697349|gb|AFJ22135.1| signal recognition particle protein 54k, partial [Bdellorhynchus
polymorphus]
gi|386697355|gb|AFJ22138.1| signal recognition particle protein 54k, partial [Zygochelifer cf.
ogarinus PBK-2011]
Length = 464
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/460 (58%), Positives = 353/460 (76%), Gaps = 9/460 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +V+MFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +MLPGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMLPGFGAELAKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + +
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYSKFS 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
+ KM G+K + K G+ L++N+N+ M++ L Q M K
Sbjct: 422 AVVKKMGGIKGLFKTGD---LTKNVNSNQMAQ-LNQQMAK 457
>gi|386697643|gb|AFJ22282.1| signal recognition particle protein 54k, partial [Pterodectinae
gen. sp. AD648]
Length = 453
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/453 (59%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ +++N+N+ M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---IAKNVNSAQMLKL 451
>gi|386697609|gb|AFJ22265.1| signal recognition particle protein 54k, partial [Monojoubertia
microphylla]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/453 (59%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N+ M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---LTKNVNSAQMLKL 451
>gi|386697483|gb|AFJ22202.1| signal recognition particle protein 54k, partial [Congocoptes
sphyrapicicola]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/462 (58%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK + IMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPIKGKTNXIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697399|gb|AFJ22160.1| signal recognition particle protein 54k, partial [Tinamoglyphus sp.
AD1186]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/461 (59%), Positives = 351/461 (76%), Gaps = 7/461 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELIKLLDPEVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MHRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K KG L++N+NA M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKG--GDLAKNVNASQMAK-LNQQMAKMI 459
>gi|386697265|gb|AFJ22093.1| signal recognition particle protein 54k, partial [Dermonoton sp.
AD1250]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/462 (58%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKVWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRMIRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697633|gb|AFJ22277.1| signal recognition particle protein 54k, partial [Alaudicola
bureschi]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/453 (59%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ +++N+N+ M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---IAKNVNSAQMLKL 451
>gi|386697541|gb|AFJ22231.1| signal recognition particle protein 54k, partial [Trouessartia sp.
AD952]
gi|386697549|gb|AFJ22235.1| signal recognition particle protein 54k, partial [Trouessartia sp.
n. AD694]
gi|386697551|gb|AFJ22236.1| signal recognition particle protein 54k, partial [Trouessartia sp.
n. AD642]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/462 (58%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLNQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M++ L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAR-LNQQMAKMI 459
>gi|386697339|gb|AFJ22130.1| signal recognition particle protein 54k, partial [Cystoidosoma sp.
AD1160]
gi|386697341|gb|AFJ22131.1| signal recognition particle protein 54k, partial [Ascouracarus sp.
AD1241]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/462 (58%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKTWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFANENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVTE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697587|gb|AFJ22254.1| signal recognition particle protein 54k, partial [Proctophyllodes
ampelidis]
gi|386697599|gb|AFJ22260.1| signal recognition particle protein 54k, partial [Proctophyllodes
canadensis]
Length = 453
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/453 (59%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N+ M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|386697403|gb|AFJ22162.1| signal recognition particle protein 54k, partial [Dermoglyphus sp.
n. AD780]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/462 (58%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMILMAVFKELIRLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK AL+CADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALICADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+I+TK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIITK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDTELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697379|gb|AFJ22150.1| signal recognition particle protein 54k, partial [Scutulanyssus
hirundicola]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 275/462 (59%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELVKLLDPGVKIWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEGQAQAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|195491937|ref|XP_002093779.1| GE21487 [Drosophila yakuba]
gi|194179880|gb|EDW93491.1| GE21487 [Drosophila yakuba]
Length = 508
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 277/489 (56%), Positives = 375/489 (76%), Gaps = 15/489 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM VS A +PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q +M+PGFS +
Sbjct: 301 EGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQFMNMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMN--DSRIMRIARGSGRQVREVME 417
M KG E+ES A++KR MTMMDSM++ ELD+ + KL + +R +R+A+G+G REV E
Sbjct: 360 MTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQTNRCVRVAQGAGVMEREVKE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ Y + + + KM G+K + K+G+M ++N+N Q ++K++ ML+Q+GG
Sbjct: 420 LIAHYTKFSAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQIAKMIDPRMLQQMGG 476
Query: 470 VGGLQNLMK 478
VGG+QN+M+
Sbjct: 477 VGGIQNMMR 485
>gi|386697675|gb|AFJ22298.1| signal recognition particle protein 54k, partial [Olistrophorus
blarinae]
Length = 453
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEGQAKAFKEKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGPELAKCASETES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697273|gb|AFJ22097.1| signal recognition particle protein 54k, partial [Freyana
lophodytes]
Length = 464
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/462 (58%), Positives = 356/462 (77%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI +AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICKALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPAKGKTNIIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNGELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++K+ MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKQMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697475|gb|AFJ22198.1| signal recognition particle protein 54k, partial [aff. Paralgopsis
sp. AD733]
gi|386697477|gb|AFJ22199.1| signal recognition particle protein 54k, partial [aff. Paralgopsis
sp. D AD1162]
Length = 464
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697151|gb|AFJ22036.1| signal recognition particle protein 54k, partial [Vidia sp. AD1098]
Length = 453
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/452 (58%), Positives = 348/452 (76%), Gaps = 6/452 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIKLVKQLRENVRTVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KK
Sbjct: 63 NKRKMIMTAVFQELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKN 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFANENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A PDL+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPDLIVYVMDASIGQACEAQAKAFKGKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM + ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K KG L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKG--GDLTKNVNPTQMAKL 451
>gi|386697381|gb|AFJ22151.1| signal recognition particle protein 54k, partial [Ptyssalges sp. n.
1 AD1157]
Length = 463
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/462 (59%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMERVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDAELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697103|gb|AFJ22012.1| signal recognition particle protein 54k, partial [Anachipteria sp.
AD1103]
Length = 460
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/457 (58%), Positives = 355/457 (77%), Gaps = 9/457 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L +I ALL+ADV KLV+E++ N++ +++ +++AAG NKR
Sbjct: 2 ALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKELRENVRSVIDFEEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+IQ A+F EL K++DPG ++TP KG+ +++MFVGLQGSGKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIQMAVFKELVKLVDPGVKAWTPIKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F E ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTNEGFEVIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM +S P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAISTTVQPNLIIYVMDASIGQACEAQARAFKSKVDVGAVIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E +
Sbjct: 242 HARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++LM E ES ++
Sbjct: 301 LDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLMKGASEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL +RI+R++RGSG REV E+L +Y + A +
Sbjct: 361 LKRLMTIMDSMSDSELDSREGAKLFTKQPNRIIRVSRGSGVTQREVQELLTQYTKFAAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
KM G+K + + G+M ++N+N M+K L Q M K
Sbjct: 421 KKMGGIKGLFRGGDM---AKNVNPTQMAK-LNQQMAK 453
>gi|386697467|gb|AFJ22194.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD871]
Length = 464
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697501|gb|AFJ22211.1| signal recognition particle protein 54k, partial [Dermatophagoides
farinae]
Length = 464
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKKLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIAPEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQALAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVSE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697653|gb|AFJ22287.1| signal recognition particle protein 54k, partial [Trochilodectes
sp. AD1138]
gi|386697655|gb|AFJ22288.1| signal recognition particle protein 54k, partial [Trochilodectes
sp. AD1236]
Length = 464
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/453 (59%), Positives = 349/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALLESDVNVMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ +++N+N M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---IAKNVNPTQMLKL 451
>gi|386697449|gb|AFJ22185.1| signal recognition particle protein 54k, partial [Picalgoides sp.
n. AD787]
Length = 464
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++K+++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRKVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGAGVSQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697669|gb|AFJ22295.1| signal recognition particle protein 54k, partial [Afrolistrophorus
sp. n. AD730]
Length = 464
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/462 (58%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGIKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSSENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGPELAKCASETES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697469|gb|AFJ22195.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD867]
Length = 464
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNILLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697465|gb|AFJ22193.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD637]
Length = 464
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNILLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697385|gb|AFJ22153.1| signal recognition particle protein 54k, partial [Ptyssalges sp.
AD1171]
gi|386697387|gb|AFJ22154.1| signal recognition particle protein 54k, partial [Ptyssalges sp. A
PBK-2011]
Length = 463
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/462 (59%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMERVFKELVKLLDPGVKVWQPVKGKINVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDAELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697321|gb|AFJ22121.1| signal recognition particle protein 54k, partial [Aetacarus sp. n.
AD537]
Length = 450
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/452 (58%), Positives = 350/452 (77%), Gaps = 8/452 (1%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG N
Sbjct: 1 TSALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLN 60
Query: 71 KRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGW 130
KR++I A+F L K+LDPG P + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGW
Sbjct: 61 KRKMIMTAVFRNLVKLLDPGVPVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGW 120
Query: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVD 190
K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVD
Sbjct: 121 KCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVD 180
Query: 191 TSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKM 250
TSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+
Sbjct: 181 TSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKL 240
Query: 251 DGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV 310
DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E
Sbjct: 241 DGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVNE- 299
Query: 311 VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQ 370
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 300 LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESM 359
Query: 371 AKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAK 427
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 360 SRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFAA 419
Query: 428 IWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + + G+ L++N+N M+K+
Sbjct: 420 VVKKMGGIKGLFRSGD---LAKNVNPAQMAKL 448
>gi|386697117|gb|AFJ22019.1| signal recognition particle protein 54k, partial [Histiostomatidae
gen. sp. AD692]
Length = 449
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/450 (59%), Positives = 350/450 (77%), Gaps = 8/450 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
AI+ + NAT+I+++VL+ L EI ALL+ADV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 AIKSLGNATVINQEVLDNMLKEICAALLEADVNILLVKKLRENVRNVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F ELCK+LDPG + P KG+P+V+MFVGLQG GKTTT TK AY++ KKGWK
Sbjct: 62 RMIMMAVFQELCKLLDPGVKQWQPVKGRPNVVMFVGLQGIGKTTTVTKMAYHYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVSKFAKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE +LFEEM + AT+PDLV++VMD+SIGQA QA+AFK V +GA+IVTK+DG
Sbjct: 182 GRHKQENSLFEEMLAIQAATSPDLVVYVMDASIGQACEAQAKAFKSKVDIGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
++ EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF EL E ES A+
Sbjct: 301 LEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPELSKCTSEAESAAR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL N +RI+R+ARG+G REV E+L +Y + A++
Sbjct: 361 LKRMMTIMDSMSDNELDSREGAKLFNRQTNRIVRVARGAGVFRREVQELLSQYTKFAQMV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
KM G+K + K+G+ L++N+N M+K+
Sbjct: 421 KKMGGMKGLFKQGD---LTKNVNPMQMAKL 447
>gi|386697447|gb|AFJ22184.1| signal recognition particle protein 54k, partial [Hyomesalges sp.
AD1028]
Length = 460
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/459 (59%), Positives = 353/459 (76%), Gaps = 9/459 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++++++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDGLLKEICTALIESDVNIKLVKQLRENVRRVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGW+
Sbjct: 62 RMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWRC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA AFKQ V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQALAFKQKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES ++
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A +
Sbjct: 361 LKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 KKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 455
>gi|386697297|gb|AFJ22109.1| signal recognition particle protein 54k, partial [Grallolichus sp.
AD907]
Length = 464
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/462 (58%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNGELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRVVRVARGSGVAQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPTQMAK-LNQQMAKMI 459
>gi|386697383|gb|AFJ22152.1| signal recognition particle protein 54k, partial [Ptyssalges sp. A
PBK-2011]
Length = 464
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/462 (59%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMERVFKELVKLLDPGVKVWQPVKGKINVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDAELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697453|gb|AFJ22187.1| signal recognition particle protein 54k, partial [Picalgoides sp.
n. AD582]
Length = 453
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 351/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697411|gb|AFJ22166.1| signal recognition particle protein 54k, partial [Metanalges sp.
AD874]
Length = 452
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/453 (59%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+Q+DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALIQSDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFYELVKLLDPGVKVWQPQKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLNQYSKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ ++N+N M+K+
Sbjct: 422 GVVKKMGGIKGLFKSGDP---AKNVNPAQMAKL 451
>gi|386697283|gb|AFJ22102.1| signal recognition particle protein 54k, partial [Falculiferidae
sp. AD1207]
Length = 464
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/462 (58%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKTGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697295|gb|AFJ22108.1| signal recognition particle protein 54k, partial [Grallobia
fulicae]
Length = 464
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/462 (58%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTT TK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTVTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D ELL+KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELLEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRVVRVARGSGVSQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|194866950|ref|XP_001971975.1| GG15264 [Drosophila erecta]
gi|190653758|gb|EDV51001.1| GG15264 [Drosophila erecta]
Length = 508
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 277/489 (56%), Positives = 375/489 (76%), Gaps = 15/489 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM VS A +PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q +M+PGFS +
Sbjct: 301 EGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQFMNMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMN--DSRIMRIARGSGRQVREVME 417
M KG E+ES A++KR MTMMDSM++ ELD+ + KL + +R +R+A+G+G REV E
Sbjct: 360 MTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQTNRCVRVAQGAGVMEREVKE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ Y + + + KM G+K + K+G+M ++N+N Q ++K++ ML+Q+GG
Sbjct: 420 LIAHYTKFSAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQIAKMIDPRMLQQMGG 476
Query: 470 VGGLQNLMK 478
VGG+QN+M+
Sbjct: 477 VGGIQNMMR 485
>gi|386697451|gb|AFJ22186.1| signal recognition particle protein 54k, partial [Picalgoides
picimajoris]
Length = 464
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVTE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGATQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|225714310|gb|ACO13001.1| Signal recognition particle 54 kDa protein [Lepeophtheirus
salmonis]
Length = 508
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/486 (55%), Positives = 362/486 (74%), Gaps = 14/486 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATI+DE+VLN L E+ ALL+ADV +LV +++ N++ ++
Sbjct: 1 MVLADLGRKINNALNSLSKATIVDEEVLNGMLKELCAALLEADVNIRLVAKLRENVRGVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++A G NKR+II++A++ EL K++DPG +TPKKGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 NFEEMAQGLNKRQIIKEAVYLELVKLVDPGVEPYTPKKGKSNVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+Y+QKKGWK LVCADTFRAGA+DQLKQNATKA+IPFYGSYTE DPV IA EGV FK
Sbjct: 121 LAWYYQKKGWKACLVCADTFRAGAYDQLKQNATKARIPFYGSYTEPDPVVIANEGVNMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRH QE ALFEEM VS A NPD +IFVMD+SIGQA QA+AFK+ V
Sbjct: 181 EEGFEIIIVDTSGRHYQEDALFEEMLAVSNAVNPDNIIFVMDASIGQACEAQARAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI +K+D HAKGGGALSAVAATKSPV+FIGTGEH+D+FE F KPFV +LLGMGD
Sbjct: 241 DVGSVITSKLDSHAKGGGALSAVAATKSPVVFIGTGEHIDDFEPFKTKPFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G + K+ E + +L+ K+ G +T+R MYEQF N++KMGP Q+ SM+PGFS
Sbjct: 301 VGLIKKVEE-CNFENNEDLINKIKHGEYTIRDMYEQFLNVMKMGPFSQILSMVPGFSQSF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM--NDSRIMRIARGSGRQVREVMEM 418
M KG E++SQA++K+ +T+MDSM +ELD K+ +R+ RIA G+G +V E+
Sbjct: 360 MAKGSEQQSQARLKKMITIMDSMNEKELDDRGAKIFIKEPTRVTRIAGGAGVYEGDVQEL 419
Query: 419 LEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHM-------SKVLPQGMLKQIGGV 470
L++Y++ ++ KM G+K + + G+M S+N+N Q M +K++ +L+QIGG
Sbjct: 420 LKQYRQFEQVVKKMGGIKGLFRGGDM---SKNVNPQQMAQLNNQIAKMMDPSVLRQIGGP 476
Query: 471 GGLQNL 476
GLQN+
Sbjct: 477 NGLQNM 482
>gi|386697373|gb|AFJ22147.1| signal recognition particle protein 54k, partial [Sturnotrogus
truncatus]
Length = 464
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/462 (59%), Positives = 352/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELVKLLDPGVKIWQPTKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEGQAQAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELD+ KL + +RI+R ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDAREGAKLFSKQPTRIVRXARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697183|gb|AFJ22052.1| signal recognition particle protein 54k, partial [Chortoglyphus
sciuricola]
Length = 464
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIILVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++TP KGK +VIMFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKAWTPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQ NI+KMGP Q +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQFLNMIPGFGAELAKGTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM + ELDS K + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMADCELDSREGAKFFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
++ KM G+K + K G+ LS+N+N M++ L Q M + I
Sbjct: 422 QVVKKMGGIKGLFKSGD---LSKNVNPAQMAR-LNQQMARMI 459
>gi|386697085|gb|AFJ22003.1| signal recognition particle protein 54k, partial [Haplochthonius
simplex]
Length = 464
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/460 (58%), Positives = 355/460 (77%), Gaps = 9/460 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L E+ ALL++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKDVLDGLLKELCTALLESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG S+ P KG+P+++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKSWQPVKGRPNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK AL+CADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALICADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFVNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S + P+L+I+VMD+SIGQA QA+AFK V VGAVI+TK
Sbjct: 183 DTSGRHKQESSLFEEMLAISNSVEPNLIIYVMDASIGQACEAQARAFKSKVDVGAVIITK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLIKGASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMNDS--RIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + RI R+ARGSG +EV E+L +Y + A
Sbjct: 362 MSRLKRLMTIMDSMSDSELDSREGAKLFSKQPLRIQRVARGSGVTQKEVQELLTQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
+ KM G+K + K G+ + +N+N M+K L Q M K
Sbjct: 422 AVVKKMGGIKGLFKSGD---IGKNVNPAQMAK-LNQQMAK 457
>gi|386697433|gb|AFJ22177.1| signal recognition particle protein 54k, partial [Analges sp. n.
AD555]
Length = 453
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/452 (59%), Positives = 348/452 (76%), Gaps = 6/452 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCATEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVAQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K KG L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKG--GDLTKNVNPAQMAKL 451
>gi|386697419|gb|AFJ22170.1| signal recognition particle protein 54k, partial [Micralges sp. B
PBK-2011]
Length = 464
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 349/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL E L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLEELLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIAKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCATEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + +
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVHELLSQYTKFS 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697695|gb|AFJ22308.1| signal recognition particle protein 54k, partial [Olabidocarpus sp.
AD416]
Length = 464
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/462 (58%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPFKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WRCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+ IGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQSAIQPNLVIYVMDAPIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697439|gb|AFJ22180.1| signal recognition particle protein 54k, partial [Analges sp. n.
AD766]
Length = 464
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/461 (58%), Positives = 352/461 (76%), Gaps = 7/461 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCATEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVAQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K KG L++N+N M+K L Q M + I
Sbjct: 422 AVVKKMGGIKGLFKG--GDLTKNVNPAQMAK-LNQQMARMI 459
>gi|386697659|gb|AFJ22290.1| signal recognition particle protein 54k, partial [Allodectes sp. A
PBK-2011]
gi|386697661|gb|AFJ22291.1| signal recognition particle protein 54k, partial [Allodectes sp.
AD1170]
Length = 464
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/453 (59%), Positives = 349/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ +++N+N M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---IAKNVNPTQMLKL 451
>gi|386697209|gb|AFJ22065.1| signal recognition particle protein 54k, partial [Lardoglyphus sp.
AD983]
Length = 464
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/462 (58%), Positives = 356/462 (77%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI +AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICKALIESDVNIMLVKKLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F+EL K+LD G ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFSELGKLLDSGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+LV++VMD+SIGQA QA+AFK V VGA+I+TK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAVQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIITK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVSE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQTTRIVRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKTGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697397|gb|AFJ22159.1| signal recognition particle protein 54k, partial [Caenolestocoptes
inca]
Length = 464
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/462 (58%), Positives = 352/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK ++IMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNIIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G RE+ E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREIQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697089|gb|AFJ22005.1| signal recognition particle protein 54k, partial [Ptyctima gen. sp.
AD1287]
Length = 464
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/460 (58%), Positives = 356/460 (77%), Gaps = 9/460 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFVSEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S AT P+L+I+VMD+SIGQA Q++AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTATQPNLIIYVMDASIGQACEAQSRAFKSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLVKGASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL +RI R++RGSG +EV E+L +Y + A
Sbjct: 362 MSRLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIQRVSRGSGVTQKEVQELLTQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
+ KM G+K + K G+M ++N+N M K L Q M K
Sbjct: 422 AVVKKMGGIKGLFKGGDM---AKNVNQTQMMK-LNQQMAK 457
>gi|386697155|gb|AFJ22038.1| signal recognition particle protein 54k, partial [Hyadesia
curassaviensis]
Length = 453
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/453 (58%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACESQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI R+A+G+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIARVAKGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPNQMAKL 451
>gi|386697663|gb|AFJ22292.1| signal recognition particle protein 54k, partial [Rhamphocaulus sp.
2B PBK-2011]
Length = 464
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ +++N+N M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---IAKNVNPTQMLKL 451
>gi|386697353|gb|AFJ22137.1| signal recognition particle protein 54k, partial [Bdellorhynchus
sp. AD982]
Length = 463
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/460 (58%), Positives = 353/460 (76%), Gaps = 9/460 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +V+MFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +MLPGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMLPGFGAELAKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + +
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYSKFS 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
+ KM G+K + K G+ L++N+N+ M++ L Q M K
Sbjct: 422 AVVKKMGGIKGLFKTGD---LTKNVNSNQMAQ-LNQQMAK 457
>gi|386697463|gb|AFJ22192.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
n. AD773]
Length = 464
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEGQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL +R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFTKQPTRLVRVARGSGVSQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LNKNVNPTQMAK-LNQQMAKMI 459
>gi|386697389|gb|AFJ22155.1| signal recognition particle protein 54k, partial [Ptyssalgidae gen.
n. sp. AD1153]
Length = 464
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/462 (59%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMERVFKELIKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFIKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDAELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697665|gb|AFJ22293.1| signal recognition particle protein 54k, partial [Rhamphocaulus sp.
B PBK-2011]
Length = 464
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPARIIRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ +++N+N M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---IAKNVNPTQMLKL 451
>gi|386697377|gb|AFJ22149.1| signal recognition particle protein 54k, partial [Scutulanyssus
subis]
Length = 464
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 274/462 (59%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELVKLLDPGVKIWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVQPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697351|gb|AFJ22136.1| signal recognition particle protein 54k, partial [Bdellorhynchus
oxyurae]
Length = 460
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/457 (59%), Positives = 351/457 (76%), Gaps = 9/457 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDPG ++ P KGK +V+MFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFKELVKLLDPGVKAWQPMKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +MLPGF +EL E ES ++
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMLPGFGAELAKCTSEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + + +
Sbjct: 361 LKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYSKFSAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
KM G+K + K G+ L++N+N+ M++ L Q M K
Sbjct: 421 KKMGGIKGLFKTGD---LTKNVNSNQMAQ-LNQQMAK 453
>gi|386697129|gb|AFJ22025.1| signal recognition particle protein 54k, partial [Ovanoetus sp.
AD652]
Length = 452
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NAT+I+++VL+ L EI ALL+ADV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSAIRSLGNATVINQEVLDNMLKEICAALLEADVNILLVKKLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+G
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKLAYYYMKRG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVNKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM + AT+PDLV++VMD+SIGQA QA+AFK V +GAVI+TK
Sbjct: 183 DTSGRHKQENSLFEEMLAIQAATSPDLVVYVMDASIGQACESQAKAFKSKVDIGAVIITK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ ++ EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF EL E ES
Sbjct: 303 -LKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPELSKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL N +RI R+ARG+G REV E+L +Y + A
Sbjct: 362 ASRLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVARGAGVWRREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
++ KM G+K + K+G+ L++N+N M+K+
Sbjct: 422 QMVKKMGGMKGLFKQGD---LTKNVNPMQMAKL 451
>gi|386697261|gb|AFJ22091.1| signal recognition particle protein 54k, partial [Kramerella oti]
Length = 464
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/461 (58%), Positives = 352/461 (76%), Gaps = 7/461 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ ++ EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K KG L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKG--GDLTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697461|gb|AFJ22191.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
n. AD601]
Length = 453
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697435|gb|AFJ22178.1| signal recognition particle protein 54k, partial [Analges spiniger]
Length = 464
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/461 (58%), Positives = 352/461 (76%), Gaps = 7/461 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCATEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVAQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K KG L++N+N M+K L Q M + I
Sbjct: 422 AVVKKMGGIKGLFKG--GDLTKNVNPAQMAK-LNQQMARMI 459
>gi|386697303|gb|AFJ22112.1| signal recognition particle protein 54k, partial [Chelomatolichus
sp. AD1166]
Length = 464
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/462 (58%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKANIPFYGSYTESDPVVIASEGVEKFTDENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAVQPNLVVYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697657|gb|AFJ22289.1| signal recognition particle protein 54k, partial [Toxerodectes sp.
A PBK-2011]
Length = 464
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 349/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPNKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ +++N+N M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---IAKNVNPTQMLKL 451
>gi|386697671|gb|AFJ22296.1| signal recognition particle protein 54k, partial [Afrolistrophorus
congoicola]
Length = 464
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/462 (58%), Positives = 352/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIVMSVFKELVKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WXCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGPELAKCASETES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697573|gb|AFJ22247.1| signal recognition particle protein 54k, partial [Xolalgidae gen.
sp. AD1199]
Length = 464
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/462 (58%), Positives = 352/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELC +LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELCTLLDPGVKIWEPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G ++K++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFVSKLLGMGDIEGLINKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D +L++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEDLIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI R+A GSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIKRVANGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + + G+ L++N+N+ M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFRSGD---LTKNVNSAQMAK-LNQQMAKMI 459
>gi|386697153|gb|AFJ22037.1| signal recognition particle protein 54k, partial [Crabrovidia sp.
AD610]
Length = 449
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/449 (59%), Positives = 346/449 (77%), Gaps = 6/449 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++ AG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICTALIESDVNIKLVKQLRENVRTVIDFDEMGAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K++DP ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLIDPVVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFSNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM +S AT PDL+++VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAISAATQPDLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +
Sbjct: 301 LDDNEELIEKLKHGEFTLRDMYEQLANIMKMGPFNQILNMIPGFGAELSKCTSEAESMFR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y + A +
Sbjct: 361 LKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGAGVTKREVQELLSQYTKFAAVV 420
Query: 430 SKMKGLKIPKKGEMSALSRNMNAQHMSKV 458
KM G+K KG L++N+N M+K+
Sbjct: 421 KKMGGIKGLFKG--GDLTKNVNPTQMAKL 447
>gi|386697271|gb|AFJ22096.1| signal recognition particle protein 54k, partial [Freyana
largifolia]
Length = 464
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/462 (58%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++K MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKCMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|195014137|ref|XP_001983965.1| GH16182 [Drosophila grimshawi]
gi|193897447|gb|EDV96313.1| GH16182 [Drosophila grimshawi]
Length = 508
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 278/489 (56%), Positives = 374/489 (76%), Gaps = 15/489 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ L+ L EI ALL+ADV + V++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALSAMLKEICAALLEADVNIRQVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPIKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM VS A +PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D EL++K+ G+FT+R MYEQFQNI+KMGP Q+ +M+PGFS +
Sbjct: 301 EGLIDKVNE-LKLDGSEELMEKIKHGHFTIRDMYEQFQNIMKMGPFSQIMNMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +R +R+A G+G REV E
Sbjct: 360 MTKGGEQESMARIKRMMTMMDSMSDSELDNRDGAKLFSKQPTRCLRVAHGAGVIEREVKE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
M+ Y + A + KM G+K + K+G+ +++N+N Q M+K++ ML+Q+GG
Sbjct: 420 MIAHYTKFAAVVKKMGGVKGLFKQGD---IAKNVNPTQMAKLNQQMAKMIDPRMLQQMGG 476
Query: 470 VGGLQNLMK 478
V GLQN+M+
Sbjct: 477 VAGLQNMMR 485
>gi|386697579|gb|AFJ22250.1| signal recognition particle protein 54k, partial [Proctophyllodes
sp. n. AD638]
Length = 453
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 349/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NA II+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNAAIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N+ M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|386697249|gb|AFJ22085.1| signal recognition particle protein 54k, partial [Heterocoptidae
gen. n. sp. AD552]
Length = 453
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/453 (58%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMTAVFKELVRLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFANENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACETQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D ELL+KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELLEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+++GSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSKGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|195337623|ref|XP_002035428.1| GM14699 [Drosophila sechellia]
gi|194128521|gb|EDW50564.1| GM14699 [Drosophila sechellia]
Length = 508
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 276/489 (56%), Positives = 375/489 (76%), Gaps = 15/489 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM VS A +PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q +M+PGFS +
Sbjct: 301 EGLLDKVNE-LKLDGNDELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQFMNMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++KR MTMMDSM++ ELD+ + KL + +R +R+A+G+G REV E
Sbjct: 360 MTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQPNRCVRVAQGAGVMEREVKE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ Y + + + KM G+K + K+G+M ++N+N Q ++K++ ML+Q+GG
Sbjct: 420 LIAHYTKFSAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQIAKMIDPRMLQQMGG 476
Query: 470 VGGLQNLMK 478
VGG+QN+M+
Sbjct: 477 VGGIQNMMR 485
>gi|386697445|gb|AFJ22183.1| signal recognition particle protein 54k, partial [Temnalges sp.
AD903]
Length = 464
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/462 (58%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPIKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE FK EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFKNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKEKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRMVRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697305|gb|AFJ22113.1| signal recognition particle protein 54k, partial [Aniacarus
mexicanus]
Length = 464
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/462 (58%), Positives = 357/462 (77%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI+ AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 INTALRSLGNATIINQEVLDNLLKEISMALMESDVNIKLVKQLRDNVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A++ EL ++LDPG ++ P KGK +V+MFVGLQG GKTTT TK AYY+ KKG
Sbjct: 63 NKRKMIMTAVYKELMRLLDPGVKAWQPVKGKTNVVMFVGLQGIGKTTTVTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK+ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKEKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCTSEHES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ LS+N+N+ M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKTGD---LSKNVNSVQMAK-LNQQMAKMI 459
>gi|386697431|gb|AFJ22176.1| signal recognition particle protein 54k, partial [Analges sp. n.
AD543]
Length = 464
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/461 (58%), Positives = 351/461 (76%), Gaps = 7/461 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCATEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFFKQPTRIVRVARGAGVAQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K KG L++N+N M+K L Q M + I
Sbjct: 422 AVVKKMGGIKGLFKG--GDLTKNVNPAQMAK-LNQQMARMI 459
>gi|386697087|gb|AFJ22004.1| signal recognition particle protein 54k, partial [Cosmochthonius
lanatus]
Length = 464
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/460 (58%), Positives = 358/460 (77%), Gaps = 9/460 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPIKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S + P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTSVQPNLIIYVMDASIGQACEAQARAFKNKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLIKGASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+A+GSG +EV E+L +Y + A
Sbjct: 362 MSRLKRLMTIMDSMSDSELDSREGAKLFSKQPTRIIRVAKGSGVTQKEVQELLTQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 465
+ KM G+K + K G+M ++N+N M+K L Q M K
Sbjct: 422 AVVKKMGGIKGLFKGGDM---AKNVNPAQMAK-LNQQMAK 457
>gi|17647949|ref|NP_523931.1| signal recognition particle protein 54k [Drosophila melanogaster]
gi|5679038|gb|AAD46831.1|AF160891_1 BcDNA.GM09489 [Drosophila melanogaster]
gi|7295492|gb|AAF50806.1| signal recognition particle protein 54k [Drosophila melanogaster]
gi|220952956|gb|ACL89021.1| Srp54k-PA [synthetic construct]
Length = 508
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 276/489 (56%), Positives = 375/489 (76%), Gaps = 15/489 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM VS A +PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q +M+PGFS +
Sbjct: 301 EGLIDKVNE-LKLDGNDELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQFMNMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++KR MTMMDSM++ ELD+ + KL + +R +R+A+G+G REV E
Sbjct: 360 MTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQPNRCVRVAQGAGVMEREVKE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ Y + + + KM G+K + K+G+M ++N+N Q ++K++ ML+Q+GG
Sbjct: 420 LIAHYTKFSAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQIAKMIDPRMLQQMGG 476
Query: 470 VGGLQNLMK 478
VGG+QN+M+
Sbjct: 477 VGGIQNMMR 485
>gi|386697697|gb|AFJ22309.1| signal recognition particle protein 54k, partial [Yunkeracarus
hylomyscus]
Length = 453
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 266/453 (58%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRTVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEVES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|195587932|ref|XP_002083715.1| GD13881 [Drosophila simulans]
gi|194195724|gb|EDX09300.1| GD13881 [Drosophila simulans]
Length = 508
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 276/489 (56%), Positives = 374/489 (76%), Gaps = 15/489 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM VS A +PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q +M+PGFS +
Sbjct: 301 EGLLDKVNE-LKLDGNDELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQFMNMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++KR MTMMDSM++ ELD+ + KL + +R +R+A+G+G REV E
Sbjct: 360 MTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQPNRCVRVAQGAGVMEREVKE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV-------LPQGMLKQIGG 469
++ Y + + + KM G+K + K+G+M ++N+N M+K+ + ML+Q+GG
Sbjct: 420 LIAHYTKFSAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQLIAKTIDPRMLQQMGG 476
Query: 470 VGGLQNLMK 478
VGG+QN+M+
Sbjct: 477 VGGIQNMMR 485
>gi|386697247|gb|AFJ22084.1| signal recognition particle protein 54k, partial [Cerophagus
nearcticus]
Length = 464
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/461 (58%), Positives = 353/461 (76%), Gaps = 7/461 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI ALL++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALLESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMHAVFKELVKLLDPGVKAWQPTKGRTNVIMFVGLQGIGKTTTCTKMAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEEFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++K+ MT+MDSM + ELDS + KL + +R++RIARG+G REV E+L +Y + A
Sbjct: 362 MSRLKKMMTIMDSMADSELDSRDGAKLFSKQPTRVVRIARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K KG L++N+N M+K L Q M + I
Sbjct: 422 AVVKKMGGIKGLFKG--GDLTKNVNPAQMAK-LNQHMARMI 459
>gi|386697109|gb|AFJ22015.1| signal recognition particle protein 54k, partial [Ovanoetus sp.
AD678]
Length = 452
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NAT+I+++VL+ L EI ALL+ADV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSAIRSLGNATVINQEVLDNMLKEICAALLEADVNILLVKKLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+G
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKLAYYYMKRG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVNKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM + AT+PDLV++VMD+SIGQA QA+AFK V +GAVI+TK
Sbjct: 183 DTSGRHKQENSLFEEMLAIQAATSPDLVVYVMDASIGQACESQAKAFKSKVDIGAVIITK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ ++ EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF EL E ES
Sbjct: 303 -LKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPELSKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL N +RI R+ARG+G REV E+L +Y + A
Sbjct: 362 ASRLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVARGAGVWRREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
++ KM G+K + K+G+ L++N+N M+K+
Sbjct: 422 QMVKKMGGMKGLFKQGD---LTKNVNPMQMAKL 451
>gi|386697455|gb|AFJ22188.1| signal recognition particle protein 54k, partial [Picalgoides aff.
pteroglossorum AD1152]
Length = 464
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/462 (58%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGAGVSQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697425|gb|AFJ22173.1| signal recognition particle protein 54k, partial [Analges sp.
AD1022]
Length = 460
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/458 (58%), Positives = 350/458 (76%), Gaps = 7/458 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES ++
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCATEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A +
Sbjct: 361 LKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGAGVAQREVQELLSQYTKFAAVV 420
Query: 430 SKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
KM G+K KG L++N+N M+K L Q M + I
Sbjct: 421 KKMGGIKGLFKG--GDLTKNVNPAQMAK-LNQQMARMI 455
>gi|386697413|gb|AFJ22167.1| signal recognition particle protein 54k, partial [Metanalges sp.
AD900]
Length = 448
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/450 (59%), Positives = 349/450 (77%), Gaps = 8/450 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+Q+DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICTALIQSDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+FNEL K+LDPG + P+KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFNELVKLLDPGVKVWQPQKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFIKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES ++
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A +
Sbjct: 361 LKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLIQYSKFAGVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
KM G+K + K G+ ++N+N M+K+
Sbjct: 421 KKMGGIKGLFKSGDP---AKNVNPAQMAKL 447
>gi|386697357|gb|AFJ22139.1| signal recognition particle protein 54k, partial [Mouchetia nr.
indochinensis AD1135]
Length = 464
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 274/462 (59%), Positives = 352/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELVKLLDPGVKIWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEVIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELD+ K + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDAREGAKXFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697207|gb|AFJ22064.1| signal recognition particle protein 54k, partial [Acaridae gen. n.
sp. n. AD469]
Length = 463
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/462 (58%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 2 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIILVKQLRENVRSVIDFDEMAAGL 61
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KG
Sbjct: 62 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKG 121
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F EN +++IV
Sbjct: 122 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTNENFEIVIV 181
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 182 DTSGRHKQESSLFEEMLAISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTK 241
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 242 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 301
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 302 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKGTSEAES 360
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM + ELDS KL + +RI+R+ARGSG REV ++L +Y + A
Sbjct: 361 MSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQDLLSQYTKFA 420
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
++ KM G+K + K G+ L++N+N M++ L Q M + I
Sbjct: 421 QVVKKMGGIKGLFKSGD---LAKNVNPAQMAR-LNQQMARMI 458
>gi|386697557|gb|AFJ22239.1| signal recognition particle protein 54k, partial [Alloptes
crassipes]
Length = 459
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/459 (58%), Positives = 354/459 (77%), Gaps = 9/459 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFNEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFKELVKLLDPGVKAWQPVKGKTNIIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
+LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTS
Sbjct: 122 SLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQARAFKEKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES ++
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y + A +
Sbjct: 361 LKRMMTIMDSMSDPELDSREGAKLFSKQPTRMVRVARGAGVTHREVQELLSQYTKFAAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 KKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 455
>gi|386697617|gb|AFJ22269.1| signal recognition particle protein 54k, partial [Proctophyllodinae
gen. sp. AD1237]
gi|386697627|gb|AFJ22274.1| signal recognition particle protein 54k, partial [Anisophyllodes
sp. AD1233]
gi|386697629|gb|AFJ22275.1| signal recognition particle protein 54k, partial [aff.
Anisophyllodes sp. AD1179]
Length = 464
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 349/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N+ M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|386697375|gb|AFJ22148.1| signal recognition particle protein 54k, partial [Pteroherpus sp.
AD615]
Length = 453
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/453 (59%), Positives = 349/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICMALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDAELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + + G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFRSGD---LAKNVNPAQMAKL 451
>gi|386697575|gb|AFJ22248.1| signal recognition particle protein 54k, partial [Xolalgidae gen.
sp. AD1204]
Length = 464
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/462 (58%), Positives = 352/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELC +LDPG + P KGK +V+MFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELCTLLDPGVKIWEPVKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G ++K++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFVSKLLGMGDIEGLINKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D +L++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEDLIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI R+A GSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIKRVAYGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + + G+ L++N+N+ M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFRSGD---LTKNVNSAQMAK-LNQQMAKMI 459
>gi|386697637|gb|AFJ22279.1| signal recognition particle protein 54k, partial [Amerodectes sp.
1B PBK-2011]
Length = 464
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 348/453 (76%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ +M G+K + K G+ + +N+N M K+
Sbjct: 422 AVVKRMGGIKGLFKTGD---IGKNVNPAQMQKL 451
>gi|386697275|gb|AFJ22098.1| signal recognition particle protein 54k, partial [Freyana sp.
AD1003]
Length = 464
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/462 (57%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPAKGKTNIIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNGELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++K+ MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKQMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697651|gb|AFJ22286.1| signal recognition particle protein 54k, partial [Amerodectes aff.
ocelatus AD1139]
Length = 463
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 349/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N+ M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|386697683|gb|AFJ22302.1| signal recognition particle protein 54k, partial [Trichoecius sp.
n. AD367]
Length = 464
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 350/462 (75%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ ++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFGEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE LFEEM + A PDLVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQENTLFEEMLAIQAAIVPDLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L +N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LMKNVNPAQMAK-LNQQMAKMI 459
>gi|386697481|gb|AFJ22201.1| signal recognition particle protein 54k, partial [Schoutedenocoptes
aquilae]
Length = 453
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/453 (58%), Positives = 351/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK ++IMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPMKGKTNIIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V +GA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKLKVDIGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|20151307|gb|AAM11013.1| AT23778p [Drosophila melanogaster]
Length = 569
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 276/489 (56%), Positives = 375/489 (76%), Gaps = 15/489 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM VS A +PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q +M+PGFS +
Sbjct: 301 EGLIDKVNE-LKLDGNDELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQFMNMIPGFSQDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++KR MTMMDSM++ ELD+ + KL + +R +R+A+G+G REV E
Sbjct: 360 MTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQPNRCVRVAQGAGVMEREVKE 419
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ Y + + + KM G+K + K+G+M ++N+N Q ++K++ ML+Q+GG
Sbjct: 420 LIAHYTKFSAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQIAKMIDPRMLQQMGG 476
Query: 470 VGGLQNLMK 478
VGG+QN+M+
Sbjct: 477 VGGIQNMMR 485
>gi|124809679|ref|XP_001348651.1| signal recognition particle SRP54, putative [Plasmodium falciparum
3D7]
gi|23497549|gb|AAN37090.1| signal recognition particle SRP54, putative [Plasmodium falciparum
3D7]
gi|326787503|gb|AEA07718.1| signal recognition particle 54 [Plasmodium falciparum]
Length = 500
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/489 (54%), Positives = 362/489 (74%), Gaps = 7/489 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG I+ A +++ +T+ D+ V+ ECL EI RAL+ +D+ ++++++NIK +
Sbjct: 1 MVLTELGTQITNAFRKLQTSTLADDVVIEECLKEIIRALILSDINVSYLKDIKSNIKNNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G+NK++++Q+ + EL K+L+ K + P KGK +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNIDIYGNNKKKLVQKYVVEELIKLLEGKKEGYNPVKGKRNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+QKKG+K ALVCADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 YAHYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIATDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ DLIIVD+SGRHKQE LFEEM QV + P+ +IFV+DS IGQ+ DQA AFK SV
Sbjct: 181 KDKYDLIIVDSSGRHKQENELFEEMIQVENSIQPEEIIFVIDSHIGQSCHDQAMAFKNSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
S+G++I+TK+DGHAKGGGALSAVAAT P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 241 SLGSIIITKIDGHAKGGGALSAVAATGCPITFIGTGEHVNDFEKFEAKSFVSRLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SG + I EV+ +D+QPEL+ +LS+G F LR MY+QFQN+ KMG + +V SM+PGF + L
Sbjct: 301 SGLVSTIKEVIDIDKQPELMNRLSKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGFGNNL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ KG EKE KIK++M +MDSMTNEELD P +NDSR +RI +GSG +++++ E+LE
Sbjct: 361 ISKGTEKEGIDKIKKFMVIMDSMTNEELDCIKP--LNDSRCLRIVKGSGTRLQDIKELLE 418
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK---VLPQGMLKQIGGVGGLQNLM 477
++K L K+ KM L + ++ +S L RN Q MSK ++ MLKQ+GG + N++
Sbjct: 419 QFKFLQKMVVKMGKLGL-RENNISNLMRN-QKQFMSKMNNIMDPNMLKQLGGANNMVNIL 476
Query: 478 KQMGSTKDM 486
K+ D+
Sbjct: 477 KEFTKMDDL 485
>gi|412992549|emb|CCO18529.1| predicted protein [Bathycoccus prasinos]
Length = 511
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/433 (61%), Positives = 343/433 (79%), Gaps = 8/433 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++ A+ +S T+IDE+++ + L EIT+ALL ADV + V +M+ NI K V
Sbjct: 1 MVLNDLGSKLANALSSLSKHTVIDEEIMEDVLKEITKALLSADVNVQYVVQMKKNIVKAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPG------KPSFTPKKGKPSVIMFVGLQGSGK 114
++DDLA G N ++++++A+FNELC MLD G K F PKKGKP+V+MFVGLQG GK
Sbjct: 61 DIDDLAGGINAKKMLEKAVFNELCNMLDGGDAKSEVKAKFVPKKGKPNVVMFVGLQGCGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTKYA Y+ +KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDP +IA E
Sbjct: 121 TTTCTKYASYYARKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPAKIAAE 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GV+ FK+E DLIIVDTSGRHKQ ALFEEMR V EA NP + I+ MDSS+GQ A DQA+
Sbjct: 181 GVQRFKEEKFDLIIVDTSGRHKQSEALFEEMRAVDEAVNPTMTIYTMDSSMGQMAKDQAE 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK +V VGAVI+TK DGH+KGGGA++AVAATKSP+IF+GTGEH+++ E FD +PFVSRL
Sbjct: 241 AFKSAVDVGAVIMTKTDGHSKGGGAIAAVAATKSPIIFVGTGEHLEDIEAFDTQPFVSRL 300
Query: 295 LGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
LG+GDW G M+K+ +VVP DQ +L+ ++ G FT+R++YEQFQNI KMGP+ QV SM+P
Sbjct: 301 LGLGDWQGLMEKLSDVVPEDQGQKLVDGITSGQFTMRLLYEQFQNITKMGPMSQVMSMIP 360
Query: 355 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVR 413
G + L P+G E+ QAKIKR + +MDSM++ ELD+ N K++ D R++RIARG+G+ +
Sbjct: 361 GMADAL-PQGSERAGQAKIKRMLCLMDSMSDTELDTCNMKILTDKKRMIRIARGAGKTPQ 419
Query: 414 EVMEMLEEYKRLA 426
+E+LEE+KRLA
Sbjct: 420 AYIELLEEFKRLA 432
>gi|386697427|gb|AFJ22174.1| signal recognition particle protein 54k, partial [Anhemialges sp.
AD813]
Length = 460
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/459 (58%), Positives = 352/459 (76%), Gaps = 9/459 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDPG + P+K K +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFKELVKLLDPGVKVWQPQKNKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAAT SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATNSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES ++
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCATEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL + +R++R++RG+G REV+E+L +Y + A +
Sbjct: 361 LKRMMTIMDSMSDSELDSREGAKLFSKQPTRVVRVSRGAGVAQREVLELLSQYTKFAAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 KKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 455
>gi|386697141|gb|AFJ22031.1| signal recognition particle protein 54k, partial [Nanacarus sp.
AD833]
Length = 464
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/462 (57%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICSALIESDVNIRLVKQLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A++ ELCK++DPG ++ P KG+P+V+MFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMMAVYQELCKLIDPGVKAWQPVKGRPNVVMFVGLQGIGKTTTCTKLAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSY ESDPV IA EGV+ F EN D+IIV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYVESDPVVIAAEGVDKFINENFDIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A PDL+I+VMD+SIGQA QA+AF V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTAVQPDLIIYVMDASIGQACEAQARAFSSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH++EFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHINEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D+ +L+ KL G FTLR MYEQ NI+KMGP Q+ SM+PGF +EL E ES
Sbjct: 303 -LKLDENDQLIDKLKHGEFTLRDMYEQLANIMKMGPFSQILSMIPGFGAELSNCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+K+KR MT+MDSM++ ELDS KL + +R+ R+ARG+G EV E+L ++ + A
Sbjct: 362 MSKLKRMMTIMDSMSDGELDSREGSKLFSKQPTRVARVARGAGMTRAEVQELLTQFTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+M +N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGDM---MKNVNPNQMAK-LNQQMAKMI 459
>gi|386697395|gb|AFJ22158.1| signal recognition particle protein 54k, partial [Strelkoviacarus
sp. AD771]
Length = 464
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/462 (58%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
++ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 LTTALRSLGNATIINQEVLDNLLKEICTALIESDVNIILVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LD G+ + P KGK +V+MFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMILTAVFKELHKLLDSGEKLWQPVKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQSAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP++FIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPILFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ ++ ELL+KL G+FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLEDTEELLEKLKHGDFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
A++KR MT+MDS+++ ELDS KL + SRI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MARLKRMMTIMDSLSDSELDSREGAKLFSKQPSRIVRVARGAGVPQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ LS+N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LSKNVNPTQMAK-LNQQMAKMI 459
>gi|386697369|gb|AFJ22145.1| signal recognition particle protein 54k, partial [Neopteronyssus
pici]
Length = 464
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 273/462 (59%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDGELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M + I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPTQMAK-LNQQMARMI 459
>gi|66362756|ref|XP_628344.1| SRP54. signal recognition 54. GTpase. [Cryptosporidium parvum Iowa
II]
gi|46229785|gb|EAK90603.1| SRP54. signal recognition 54. GTpase. [Cryptosporidium parvum Iowa
II]
Length = 515
Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/499 (55%), Positives = 360/499 (72%), Gaps = 9/499 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LGG ++ AI++ ++TI DE ++ CL EI ALL+ADV KLV +++ NIKK V
Sbjct: 16 MVLADLGGQLASAIRKFQSSTIADEAAIDLCLKEIATALLKADVNVKLVAQLRNNIKKAV 75
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+D G N+RR IQ A+ EL +L P + + P++ K +VI+FVGLQGSGKTTTCTK
Sbjct: 76 EQEDSVGGSNRRRQIQSAVVEELVNILTPSRTPYVPQRDKSNVIVFVGLQGSGKTTTCTK 135
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A Y+Q++GWK ALVCADTFRAGAFDQLKQNATK KIPFYGSYTE+DPV+IA +GV F+
Sbjct: 136 FANYYQRRGWKTALVCADTFRAGAFDQLKQNATKVKIPFYGSYTETDPVKIARDGVREFR 195
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQE++LF EM QV TNPD V+FVMDS IGQA +DQA AF +V
Sbjct: 196 KEGYDLIIVDTSGRHKQESSLFVEMEQVVMETNPDDVVFVMDSHIGQACYDQAMAFCNAV 255
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT +P+IFIGTGEH DEFE F+ K FVSRLLG+GD
Sbjct: 256 DVGSVIITKLDGHAKGGGALSAVAATGAPIIFIGTGEHFDEFEPFETKGFVSRLLGLGDI 315
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
SG M KI+EVVP+D+QP+++ +L +G FTLR MYEQFQN+L MG + SM+PG +
Sbjct: 316 SGLMAKINEVVPLDRQPDMVNRLVQGIFTLRDMYEQFQNMLNMGSPSALLSMIPGMGPNI 375
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ K E+ ++K++M +MDSMT ELD N K +N SR+ RI+RGSG ++V E+L
Sbjct: 376 LAKEDEQAGIERLKKFMVIMDSMTESELD--NEKTINASRVERISRGSGTSNQDVQELLS 433
Query: 421 EYKRLAKIWSKM--KGLKIPKKGEMSALSRNMN--AQHMSKVLPQGMLKQIGGVGGLQNL 476
++K +K+ ++ GL +MS++ +N Q M K + + K +GG + N+
Sbjct: 434 QHKMFSKMVGQIGKLGLGKKGGLDMSSIMKNPTQLIQKMQKAIDPRIFKHMGGAQNMMNM 493
Query: 477 MKQMG---STKDMMGMFGG 492
M++M + D MFGG
Sbjct: 494 MREMDKFQGSPDFQKMFGG 512
>gi|386697365|gb|AFJ22143.1| signal recognition particle protein 54k, partial [Pteronyssus aff.
centurus AD634]
Length = 464
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 273/462 (59%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDGELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M + I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMARMI 459
>gi|386697279|gb|AFJ22100.1| signal recognition particle protein 54k, partial [Falculifer sp.
AD994]
Length = 460
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/459 (58%), Positives = 351/459 (76%), Gaps = 9/459 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 KMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQARAFKDKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES ++
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL + +R +R+ARGSG REV E+L +Y + A +
Sbjct: 361 LKRMMTIMDSMSDSELDSREGAKLFSKQPTRTVRVARGSGVTQREVQELLSQYTKFAAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
KM G+K + K G+ LS+N+N M+K L Q M K I
Sbjct: 421 KKMGGIKGLFKTGD---LSKNVNPAQMAK-LNQQMAKMI 455
>gi|386697367|gb|AFJ22144.1| signal recognition particle protein 54k, partial [Stenopteronyssus
proctorae]
Length = 453
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/453 (59%), Positives = 349/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDGELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697471|gb|AFJ22196.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD938]
gi|386697473|gb|AFJ22197.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD1042]
Length = 460
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/459 (58%), Positives = 352/459 (76%), Gaps = 9/459 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLLDPEVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES ++
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS K+ + +R++R+ARGSG REV E+L +Y + A +
Sbjct: 361 LKRMMTIMDSMSDSELDSREGAKIFSKQPTRLVRVARGSGVSQREVQELLSQYTKFAAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 KKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 455
>gi|386697417|gb|AFJ22169.1| signal recognition particle protein 54k, partial [Megniniella sp.
AD966]
Length = 449
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/450 (58%), Positives = 351/450 (78%), Gaps = 8/450 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+QADV LV++++ N++K+++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICTALIQADVNIVLVKQLRENVRKVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+FNEL ++LDPG ++ P+KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFNELVRLLDPGVKTWQPQKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPF+GSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFFGSYTESDPVVIASEGVEKFTNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKEKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
++ EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL + ES ++
Sbjct: 301 LENNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASDAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + + +
Sbjct: 361 LKRMMTIMDSMSDTELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLHQYSKFSAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
KM G+K + K G+ ++N+N M+K+
Sbjct: 421 KKMGGIKGLFKSGDP---AKNVNPAQMAKL 447
>gi|386697485|gb|AFJ22203.1| signal recognition particle protein 54k, partial [Echimytricalges
guyanensis]
Length = 453
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/453 (58%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS K+ + +R++R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKIFSKQPTRLVRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697649|gb|AFJ22285.1| signal recognition particle protein 54k, partial [Xynonodectes sp.
B PBK-2011]
Length = 464
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/453 (58%), Positives = 348/453 (76%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPXKGKTNVIMFVGLQGIGKTTTCTKMAYYYMXKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F +EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTRENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ +++N+N M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---IAKNVNPTQMLKL 451
>gi|386697319|gb|AFJ22120.1| signal recognition particle protein 54k, partial [Phyllochaeta
tenuiseta]
Length = 464
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/462 (57%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P++ P KGKP+++MFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPAWQPIKGKPNIVMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNA KA+IPFYGSYTESDPV IA EGVE FK+E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNAHKARIPFYGSYTESDPVVIASEGVEKFKEEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQENSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +D+++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDRVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ ++ EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR +T+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMLTIMDSMSDSELDSREGAKLFSKQQTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697647|gb|AFJ22284.1| signal recognition particle protein 54k, partial [Xynonodectes sp.
AD1213]
Length = 464
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/453 (58%), Positives = 349/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F +EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTRENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ +++N+N M K+
Sbjct: 422 AVVKKMGGIKGLFKTGD---IAKNVNPTQMLKL 451
>gi|386697131|gb|AFJ22026.1| signal recognition particle protein 54k, partial [Anoetus sp.
AD664]
Length = 449
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/450 (59%), Positives = 348/450 (77%), Gaps = 8/450 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
AI+ + NAT+I+++VL+ L EI ALL+ADV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 AIRSLGNATVINQEVLDSMLKEICAALLEADVNILLVKKLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F ELCK+LDPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+GWK
Sbjct: 62 RMIMMAVFQELCKLLDPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKLAYYYMKRGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVNKFAKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE +LFEEM + AT+PDLV++VMD+SIGQA QA+AFK V +GAVIVTK+DG
Sbjct: 182 GRHKQENSLFEEMLAIQAATSPDLVVYVMDASIGQACESQAKAFKNKVDIGAVIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
++ EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF EL E ES A+
Sbjct: 301 LEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPELSKCTSEAESAAR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL N +RI R+ARG+G R+V E+L +Y + A++
Sbjct: 361 LKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVARGAGVWRRDVQELLSQYTKFAQMV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
KM G+K + K+G+ L++N+N M+K+
Sbjct: 421 KKMGGMKGLFKQGD---LTKNVNPMQMAKL 447
>gi|386697167|gb|AFJ22044.1| signal recognition particle protein 54k, partial [Sennertia
zhelochovtsevi]
Length = 453
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/453 (58%), Positives = 348/453 (76%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATI ++ VL+ L EI +AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIXNQDVLDSLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVRLLDPGVKPWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQENSLFEEMLAISAAVQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF + L E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAXLSKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697243|gb|AFJ22082.1| signal recognition particle protein 54k, partial [Histiogaster sp.
AD356]
Length = 450
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/452 (58%), Positives = 348/452 (76%), Gaps = 8/452 (1%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG N
Sbjct: 1 TTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIVLVKKLRENVRSVIDFDEMAAGLN 60
Query: 71 KRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGW 130
KRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGW
Sbjct: 61 KRRMIMMAVFQELVKLLDPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGW 120
Query: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVD 190
K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVD
Sbjct: 121 KCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFTNENFEIVIVD 180
Query: 191 TSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKM 250
TSGRHKQE++LFEEM +S A P +++VMD+SIGQA QA+AFK V VGA+IVTK+
Sbjct: 181 TSGRHKQESSLFEEMLAISAAVQPQQIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTKL 240
Query: 251 DGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV 310
DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 241 DGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE- 299
Query: 311 VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQ 370
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 300 LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESM 359
Query: 371 AKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAK 427
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 360 SRLKRMMTIMDSMSDAELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAA 419
Query: 428 IWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 420 VVKKMGGIKGLFKTGD---LTKNVNPAQMAKL 448
>gi|386697127|gb|AFJ22024.1| signal recognition particle protein 54k, partial [Sellea sp. AD658]
Length = 449
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/450 (59%), Positives = 349/450 (77%), Gaps = 8/450 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
AI+ + NAT+I+++VL+ L EI ALL++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 AIRSLGNATVINQEVLDNMLKEICAALLESDVNILLVKKLRENVRNVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F ELCK+LDPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+GWK
Sbjct: 62 RMIMMAVFQELCKLLDPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKMAYYYMKRGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVSKFAKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + AT+PDLV++VMD+SIGQA QA+AFK V +GA+I+TK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAATSPDLVVYVMDASIGQACEAQAKAFKSKVDIGAIIITKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSPVIFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPVIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
++ EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF EL E ES A+
Sbjct: 301 LEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPELSKCTSEAESAAR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL N +RI R+ARG+G REV E+L +Y + A++
Sbjct: 361 LKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVARGAGVWRREVQELLSQYTKFAQMV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
KM G+K + K+G+ L++N+N M+K+
Sbjct: 421 KKMGGMKGLFKQGD---LTKNVNPMQMAKL 447
>gi|386697245|gb|AFJ22083.1| signal recognition particle protein 54k, partial [Sennertionyx
manicati]
Length = 464
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 263/452 (58%), Positives = 350/452 (77%), Gaps = 6/452 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICSALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMHAVFKELVKLLDPGVKTWQPTKGRTNVIMFVGLQGIGKTTTCTKMAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEEFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++K+ MT+MDSM++ ELDS + KL + +R++RIARG+G REV E+L +Y + A
Sbjct: 362 MSRLKKMMTIMDSMSDSELDSRDGAKLFSKQPTRVVRIARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K KG L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKG--GDLTKNVNPAQMAKL 451
>gi|386697489|gb|AFJ22205.1| signal recognition particle protein 54k, partial [Psoroptes ovis]
Length = 449
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/450 (58%), Positives = 349/450 (77%), Gaps = 8/450 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKKLRENVRNVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMRAVFQELCKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQARAFKSKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +D+++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDRVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL++K+ G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES ++
Sbjct: 301 LDDNEELIEKIKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A +
Sbjct: 361 LKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGAGCTQREVQELLSQYTKFAAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
KM G+K + K G+ L++N+N M+K+
Sbjct: 421 KKMGGIKGLFKSGD---LAKNVNPAQMAKL 447
>gi|386697673|gb|AFJ22297.1| signal recognition particle protein 54k, partial [Carnilistrophorus
rhynchocyoni]
Length = 453
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/453 (58%), Positives = 349/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIVMSVFKELVKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+I+TK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIITK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGPELAKCASETES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697645|gb|AFJ22283.1| signal recognition particle protein 54k, partial [Metapterodectes
sp. n. AD556]
Length = 453
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/453 (58%), Positives = 348/453 (76%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ +M G+K + K G+ + +N+N M K+
Sbjct: 422 AVVKRMGGIKGLFKTGD---IGKNVNPAQMQKL 451
>gi|386697269|gb|AFJ22095.1| signal recognition particle protein 54k, partial [Freyana sp. n.
AD630]
Length = 464
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/462 (57%), Positives = 354/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPAKGKTNIIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNGELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++K+ MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKQMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697437|gb|AFJ22179.1| signal recognition particle protein 54k, partial [Analges
passerinus]
Length = 448
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/449 (59%), Positives = 345/449 (76%), Gaps = 6/449 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCATEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVAQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLKIPKKGEMSALSRNMNAQHM 455
+ KM G+K KG L++N+N M
Sbjct: 422 AVVKKMGGIKGLFKG--GDLTKNVNPAQM 448
>gi|386697513|gb|AFJ22217.1| signal recognition particle protein 54k, partial [Microlichus sp.
AD759]
gi|386697515|gb|AFJ22218.1| signal recognition particle protein 54k, partial [Epidermoptidae
sp. B]
Length = 464
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/462 (58%), Positives = 352/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N+++ ++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRREIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMITVFQELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ ++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---FTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697363|gb|AFJ22142.1| signal recognition particle protein 54k, partial [Pteronyssus
sphyrapicinus]
Length = 460
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 272/459 (59%), Positives = 351/459 (76%), Gaps = 9/459 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
RII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG+K
Sbjct: 62 RIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGFKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES ++
Sbjct: 301 LDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y + A +
Sbjct: 361 LKRMMTIMDSMSDGELDAREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKFAAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
KM G+K + K G+ L++N+N M+K L Q M + I
Sbjct: 421 KKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMARMI 455
>gi|386697137|gb|AFJ22029.1| signal recognition particle protein 54k, partial [Hemisarcoptidae
gen. sp. AD666]
Length = 464
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/462 (57%), Positives = 351/462 (75%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICSALIESDVNIRLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A++ ELCK++DPG ++ P KG+ +V+MFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVYQELCKLIDPGVKAWQPVKGRTNVVMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN D+IIV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFTNENFDIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A PDL+I+VMD+SIGQA QA+AF V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTAVQPDLIIYVMDASIGQACEAQARAFSSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH++EFE F KPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHINEFEQFKAKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D +L+ KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEQLIDKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
K+KR MT+MDSM++ ELDS KL + +R++R+ARG+G EV E+L ++ + A
Sbjct: 362 MGKLKRMMTIMDSMSDSELDSREGSKLFSKQPTRMVRVARGAGVTRAEVQELLGQFTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+M +N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGDM---MKNVNPTQMAK-LNQQMAKMI 459
>gi|386697359|gb|AFJ22140.1| signal recognition particle protein 54k, partial [Ramphastobius sp.
A PBK-2011]
Length = 464
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/453 (59%), Positives = 348/453 (76%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVTE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIGKLKHGQFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDGELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697285|gb|AFJ22103.1| signal recognition particle protein 54k, partial [Herodialges sp.
AD945]
Length = 464
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/462 (58%), Positives = 350/462 (75%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KG +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAYQPIKGMTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIAAEGVEKFSKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRLA 426
++KR MT+MDSM++ ELDS KL +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MFRLKRMMTIMDSMSDSELDSREGAKLFFKQPTRIVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G K + K G+ ++N+N ++K L Q M K I
Sbjct: 422 AVVKKMGGTKGLFKSGD---FAKNVNPAQLAK-LNQQMAKMI 459
>gi|386697301|gb|AFJ22111.1| signal recognition particle protein 54k, partial [Scolaralichus sp.
AD1165]
Length = 464
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/462 (58%), Positives = 352/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA IP+YGSY ESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKAGIPYYGSYIESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAVQPNLVVYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLTQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697361|gb|AFJ22141.1| signal recognition particle protein 54k, partial [Parapteronyssus
picoides]
Length = 460
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 272/459 (59%), Positives = 351/459 (76%), Gaps = 9/459 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
RII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG+K
Sbjct: 62 RIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGFKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES ++
Sbjct: 301 LDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y + A +
Sbjct: 361 LKRMMTIMDSMSDGELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFAAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
KM G+K + K G+ L++N+N M+K L Q M + I
Sbjct: 421 KKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMARMI 455
>gi|386697139|gb|AFJ22030.1| signal recognition particle protein 54k, partial [Congovidia sp.
AD699]
Length = 464
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/462 (57%), Positives = 351/462 (75%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV +LV++++ N++ I++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICSALIESDVNIRLVKQLRENVRAIIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A++ ELCK++DPG ++ P KG +V+MFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVYQELCKLIDPGVKAWQPVKGHTNVVMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F EN D+IIV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVDKFINENFDIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A PDL+++VMD+SIGQA QA+AF V VGAVI+TK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTAVQPDLIVYVMDASIGQACEAQARAFSSKVDVGAVIITK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IF+GTGEH++EFE F KPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFVGTGEHINEFEQFKAKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D +L+ KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEQLIDKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
K+KR MT+MDSM++ ELDS KL + +RI+R+ARG+G EV E+L ++ R A
Sbjct: 362 MGKLKRMMTIMDSMSDSELDSREGSKLFSKQPTRIVRVARGAGASRAEVQELLVQFTRFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ LS+N+N M+K L Q M + I
Sbjct: 422 GVVKKMGGIKGLFKSGD---LSKNVNPTQMAK-LNQQMARMI 459
>gi|313236259|emb|CBY11581.1| unnamed protein product [Oikopleura dioica]
Length = 520
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/496 (53%), Positives = 367/496 (73%), Gaps = 18/496 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A++ + N+ +I+E VL +CL ++ ALL+ADV KLV+++ +KK +
Sbjct: 1 MVLADLGRKLTTALRSLGNSPVINEDVLKKCLKDVQSALLEADVNIKLVKQLTDGVKKQI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+LD++ G NKRR+IQ A++ ELC++ DPG + P KG+ SVIMFVGLQGSGKTT+C K
Sbjct: 61 DLDNIGTGLNKRRVIQTAVYKELCRICDPGVKPWKPTKGRSSVIMFVGLQGSGKTTSCIK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKKGWK A+VCADTFRAGA+DQ+KQN TKA+IPFYGS TE DP IA +GVETFK
Sbjct: 121 LAYHYQKKGWKCAVVCADTFRAGAYDQVKQNCTKARIPFYGSLTEPDPAVIAYDGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD+SIGQA QA+AFK V
Sbjct: 181 KEKFDIIIVDTSGRHKQEDSLFEEMLQVNNAVEPDNIIFVMDASIGQACESQAKAFKDQV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+D HAKGGGALSA+AAT+SP++FIGTGEH+DE E F+ F+ +LL MGD
Sbjct: 241 DVGSVIITKLDSHAKGGGALSAIAATQSPIVFIGTGEHIDELEPFETTKFIRKLLNMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK+++ + ++ +L + L +G FTLR MYEQFQNILKMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNQ-LKLEDNEDLKKNLQKGRFTLRDMYEQFQNILKMGPFNQIMGMIPGF-NDF 358
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDS---RIMRIARGSGRQVRE 414
M KG E+ES ++++ M +MDSM+ +ELDS + + ND R+ R+ARGSG +E
Sbjct: 359 MNKGHEQESTNRLRKLMCIMDSMSEDELDSPDGHKLFKNNDDGSRRLRRVARGSGSSPKE 418
Query: 415 VMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQ-------HMSKVLPQGMLKQI 467
V E++++Y++ A++ KM G+ + K G+ LS+NMN Q HM+K++ +L+Q+
Sbjct: 419 VFELIDQYQKFAQMVKKMGGMGLFKNGD---LSKNMNMQQMNQINGHMAKMMDPRVLQQM 475
Query: 468 GGVGGLQNLMKQMGST 483
GG+ GL+ +M+Q +
Sbjct: 476 GGMDGLKKMMQQFNQS 491
>gi|386697293|gb|AFJ22107.1| signal recognition particle protein 54k, partial [Grallobia sp.
AD959]
Length = 453
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/453 (58%), Positives = 350/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTT TK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTVTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ D + ELL+KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 LKLADNE-ELLEKLKHGEFTIRDMYEQLTNIMKMGPFNQMLNMIPGFGADLAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS K+ + +R+MR+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDTELDSREGAKIFSKQPTRVMRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697639|gb|AFJ22280.1| signal recognition particle protein 54k, partial [Amerodectes sp.
AD680]
Length = 464
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/453 (58%), Positives = 347/453 (76%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM + ELDS KL + +RI+R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ +M G+K + K G+ + +N+N M K+
Sbjct: 422 AVVKRMGGIKGLFKTGD---IGKNVNPAQMQKL 451
>gi|386697371|gb|AFJ22146.1| signal recognition particle protein 54k, partial [Pteronyssoides
piscinotus]
Length = 464
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/462 (58%), Positives = 352/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ I++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIKLVKKLRENVRSIIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +V+MFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELVKLLDPGVKCWQPTKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
++ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 YRSALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A +P+L+++VMD+SIGQA QAQAF+ V +GA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIKSAISPNLIVYVMDASIGQACEAQAQAFQNKVDIGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMYEQLINIMKMGPFNQILNMIPGFGADLAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELD+ KL +RI R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDAREGAKLFTKQPTRISRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPSQMAK-LNQQMAKMI 459
>gi|403264840|ref|XP_003924676.1| PREDICTED: signal recognition particle 54 kDa protein [Saimiri
boliviensis boliviensis]
Length = 567
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/448 (59%), Positives = 349/448 (77%), Gaps = 9/448 (2%)
Query: 22 IIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFN 81
+++ +VLN L E+ ALL+ADV KLV++++ N+K ++L+++A+G NKR++IQ A+F
Sbjct: 14 LVESRVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFK 73
Query: 82 ELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFR 141
EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K AYY+Q+KGWK L+CADTFR
Sbjct: 74 ELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFR 133
Query: 142 AGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAAL 201
AGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +L
Sbjct: 134 AGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSL 193
Query: 202 FEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALS 261
FEEM QV+ A PD +++VMD+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALS
Sbjct: 194 FEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALS 253
Query: 262 AVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQ 321
AVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD G +DK++E + +D L++
Sbjct: 254 AVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIE 312
Query: 322 KLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMD 381
KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++ M KG E+ES A++K+ MT+MD
Sbjct: 313 KLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMD 372
Query: 382 SMTNEELDSSN-PKLMNDS--RIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-I 437
SM ++ELDS++ K+ + RI R+ARGSG R+V E+L +Y + A++ KM G+K +
Sbjct: 373 SMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGL 432
Query: 438 PKKGEMSALSRNMNAQHMSKVLPQGMLK 465
K G+M S+N++ M+K L Q M K
Sbjct: 433 FKGGDM---SKNVSQSQMAK-LNQQMAK 456
>gi|386697311|gb|AFJ22116.1| signal recognition particle protein 54k, partial [Ptiloxenus sp.
AD1257]
Length = 464
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/462 (57%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P++ P KGKP+++MFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPAWQPVKGKPNIVMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNA KA+IPFYGSYTESDPV IA EGV+ F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNAHKARIPFYGSYTESDPVVIASEGVDKFINEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQENSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFEVEPFISKLLGMGDIKGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPNRIIRVSRGSGVTQREVKELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|221059453|ref|XP_002260372.1| signal recognition particle [Plasmodium knowlesi strain H]
gi|193810445|emb|CAQ41639.1| signal recognition particle, putative [Plasmodium knowlesi strain
H]
Length = 500
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 255/490 (52%), Positives = 363/490 (74%), Gaps = 5/490 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ + + D+ + ECL E+ RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGTQLTSALQKLQASAVADDSAIEECLKEVIRALILADINISYLKDIKSNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G+NK+R++QQ + EL +L+ K S+ PKKG +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNIDLYGNNKKRLVQQYVVEELINLLEGKKESYVPKKGSRNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A+Y+QKKG+K ALVCADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 FAHYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIASDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVD+SGRHKQE+ LFEEM+QV + NP+ ++FV+DS IGQ+ DQA AFK SV
Sbjct: 181 KEKYDLIIVDSSGRHKQESELFEEMKQVESSINPEEIVFVIDSHIGQSCHDQAMAFKNSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
++G++I+TK+DGHAKGGGALSAVA+T P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 241 TLGSIIITKIDGHAKGGGALSAVASTGCPITFIGTGEHINDFEKFEAKSFVSRLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G + + EV+ +++QP+L+ +LS+G F LR MY+QFQN+ KMG + +V SM+PGF + +
Sbjct: 301 NGLVSTLKEVIDIEKQPQLINRLSKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGFGNNI 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ KG EKE KIK++M +MDSMTNEELD P +NDSR +RI +GSG +++++ E+LE
Sbjct: 361 ISKGTEKEGIEKIKKFMVIMDSMTNEELDCVKP--LNDSRCLRICKGSGTRLQDIRELLE 418
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQNLMK 478
++K L + SKM L + ++ + +L RN M+ ++ ML Q+GG + N++K
Sbjct: 419 QFKFLKNMVSKMGKLGL-RENNIGSLMRNQKQFLSKMNNIIDPSMLGQMGGANNMVNILK 477
Query: 479 QMGSTKDMMG 488
+ D+ G
Sbjct: 478 EFTKMDDLGG 487
>gi|386697105|gb|AFJ22013.1| signal recognition particle protein 54k, partial [Kanoetus sp. n.
AD763]
Length = 452
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 262/453 (57%), Positives = 352/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NA II+++VL+ L E+ AL++ADV LV++++ N++K+++ +++AAG
Sbjct: 3 ITSAIRSLGNAPIINQQVLDGMLKEVCAALIEADVNILLVKKLRENVRKVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +F ELCK+LDPG +TP KGK +V+MFVGLQG GKTTT TK AYY+ K+G
Sbjct: 63 NKRRMIMMTVFQELCKLLDPGVAQWTPVKGKTNVVMFVGLQGIGKTTTVTKMAYYYMKRG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F ++ D++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAAEGVKLFTEKAFDIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRH+QE++LFEEM + T+PDLV++VMD+SIGQA QA+AFK V++GA+IVTK
Sbjct: 183 DTSGRHRQESSLFEEMLAIQATTSPDLVVYVMDASIGQACEAQAKAFKNKVAIGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAATKSP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATKSPIIFIGTGEHIDQFEPFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ ++ EL+ KL G FTLR MYEQ NI+KMGP Q+ SMLPGF E+M + ES
Sbjct: 303 -LKLEDNEELINKLKHGEFTLRDMYEQLNNIMKMGPFNQILSMLPGFGPEMMKNASDAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDSSN-PKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLA 426
A++KR MT+MDSM++ ELDS KL N +RI+R+ARG+G REV ++L +Y + A
Sbjct: 362 AARLKRLMTIMDSMSDSELDSKEGSKLFNRQPTRIVRVARGAGVYQREVQDLLLQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
++ KM G+K + K+G+ +++N+N M+K+
Sbjct: 422 QMVKKMGGMKGLFKQGD---ITKNVNPMQMAKL 451
>gi|340508125|gb|EGR33903.1| signal recognition particle 54 kda protein srp54, putative
[Ichthyophthirius multifiliis]
Length = 536
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/498 (53%), Positives = 361/498 (72%), Gaps = 8/498 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A+ +++NA +ID+K+LN+ LNEI+ ALLQ+DV K V++++ NI
Sbjct: 1 MVLAELGQKINNALSKLNNAQVIDDKILNQVLNEISIALLQSDVNAKFVKKLKDNILVQF 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ + + N R++IQQ + EL MLD K F PK+G+P++IMFVGLQG GKTTTCTK
Sbjct: 61 KMQE-SESVNMRKMIQQLVIKELTAMLDSQKKPFIPKRGRPNIIMFVGLQGVGKTTTCTK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y QKKGW+ ALVCADTFRAGAFDQLKQNATK ++PFYGSY+E+D IA EGV TFK
Sbjct: 120 YANYWQKKGWRTALVCADTFRAGAFDQLKQNATKIRVPFYGSYSETDSSIIAEEGVRTFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN ++IIVDTSG H+QEA LFEEM+ VS A NPD IFVMD S+GQA +DQA AF+Q+V
Sbjct: 180 KENYEIIIVDTSGTHRQEAELFEEMKLVSAAVNPDECIFVMDGSVGQACYDQASAFRQAV 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH D+ E FD + F+ RLLG+GD
Sbjct: 240 NVGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHFDDLEPFDPQSFIKRLLGLGDI 299
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G K+ EV+ + QQP+L+ +++EG F++R QF++ILK+G I Q SM+PG +
Sbjct: 300 AGLFQKVTEVIDVKQQPQLINRIAEGQFSIRDFQSQFKSILKLGSISQFMSMIPGLGNSF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ K EKES K+K+++ +MDSM + ELD +++ RI++IA GSG + EV +LE
Sbjct: 360 LDKNNEKESIKKVKKFLCIMDSMNDLELDGDGK--ISEKRIVKIAYGSGNSIEEVHSLLE 417
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMN--AQHMSKVLPQGMLKQIGGVGGLQNLMK 478
EYKRL+K++ K+ + K + S + RN A M L M++ +GG+G + N+MK
Sbjct: 418 EYKRLSKVFGKLGKTNLGKGNDFSNIQRNAQQIAGKMGSALDPKMIQSMGGMGNIMNIMK 477
Query: 479 QMGSTK---DMMGMFGGG 493
M + +MM GGG
Sbjct: 478 DMSKMEGLGEMMKGLGGG 495
>gi|386697635|gb|AFJ22278.1| signal recognition particle protein 54k, partial [Amerodectes sp.
AD1046]
Length = 464
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/453 (58%), Positives = 346/453 (76%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLGSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS K + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKFFSKQPTRIVRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ +M G+K + K G+ + +N+N M K+
Sbjct: 422 AVVKRMGGIKGLFKTGD---IGKNVNPAQMQKL 451
>gi|194373485|dbj|BAG56838.1| unnamed protein product [Homo sapiens]
Length = 466
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/463 (57%), Positives = 358/463 (77%), Gaps = 11/463 (2%)
Query: 39 LLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKK 98
++ ADV KLV++++ N+K ++L+++A+G NKR++IQ A+F EL K++DPG ++TP K
Sbjct: 1 MVLADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTK 60
Query: 99 GKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIP 158
GK +VIMFVGLQGSGKTTTC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IP
Sbjct: 61 GKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIP 120
Query: 159 FYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVI 218
FYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD ++
Sbjct: 121 FYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIV 180
Query: 219 FVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH 278
+VMD+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH
Sbjct: 181 YVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEH 240
Query: 279 MDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQ 338
+D+FE F +PF+S+LLGMGD G +DK++E + +D L++KL G FTLR MYEQFQ
Sbjct: 241 IDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQ 299
Query: 339 NILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMN 397
NI+KMGP Q+ M+PGF ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ +
Sbjct: 300 NIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFS 359
Query: 398 D--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA- 452
RI R+ARGSG R+V E+L +Y + A++ KM G+K + K G+MS +S++ A
Sbjct: 360 KQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAK 419
Query: 453 --QHMSKVLPQGMLKQIGGVGGLQNLMKQM--GSTKDMMGMFG 491
Q M+K++ +L +GG+ GLQ++M+Q G+ +M GM G
Sbjct: 420 LNQQMAKMMDPRVLHHMGGMAGLQSMMRQFQQGAAGNMKGMMG 462
>gi|386697641|gb|AFJ22281.1| signal recognition particle protein 54k, partial [Amerodectes sp.
AD1195]
Length = 464
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 264/453 (58%), Positives = 347/453 (76%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P +GK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPVRGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYE NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYETLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ +M G+K + K G+ + +N+N M K+
Sbjct: 422 AVVKRMGGIKGLFKTGD---IGKNVNPAQMQKL 451
>gi|71033463|ref|XP_766373.1| signal recognition particle 54 kDa protein [Theileria parva strain
Muguga]
gi|68353330|gb|EAN34090.1| signal recognition particle 54 kDa protein, putative [Theileria
parva]
Length = 495
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 258/491 (52%), Positives = 355/491 (72%), Gaps = 4/491 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+L I++A +++ + T+I E V+ E + +I RALL ADV KLV +++ N+K++
Sbjct: 1 MVLAELSNQITKAFRKLHSTTVISEAVIEEVIGDIVRALLMADVNVKLVHKLKENVKRLN 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G NKRR +Q+ + +EL ML K F PKKG+ +VIMFVGLQG+GKTT+CTK
Sbjct: 61 KNNADMIGANKRRYLQKIVVDELVNMLTTEKKPFEPKKGRCNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+AY++Q+KGW+ AL+CADTFRAGAFDQLKQNA K KI FYGSY+E++P ++A +GV FK
Sbjct: 121 FAYHYQRKGWRTALICADTFRAGAFDQLKQNAAKVKISFYGSYSEANPAKVAADGVARFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E D+IIVDTSGRHKQE ALF+EM+ + +A PD V+FVMDS IGQA +DQA AF ++V
Sbjct: 181 EEKYDMIIVDTSGRHKQEDALFDEMKLIYDAVQPDEVVFVMDSHIGQACYDQAAAFNKAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAV+AT SP+IFIGTGEH D+FE FD K F+SRLLG GD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVSATNSPIIFIGTGEHFDDFEPFDPKSFISRLLGFGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + +V+ +D +P+LL +++ FT+R MY+QFQN+LKM PIG+V SMLPG EL
Sbjct: 301 NGLINTLKDVINLDDKPDLLDRIASAKFTIRDMYDQFQNLLKMAPIGKVMSMLPGIPPEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ GRE+E +IKR+M +MDSMT+EELD P +N SRIMRIA+GSG E+ +++
Sbjct: 361 LQAGREQEGVDRIKRFMIIMDSMTDEELDCEKP--LNGSRIMRIAKGSGSSPHEISFLID 418
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQNLMK 478
++K L K+ M + + K M + RN N M ++ +L Q+GG G + LMK
Sbjct: 419 QHKTLQKMVGSMGKMGLNKDNAMQNIMRNPNQLLNKMQTMIDPRLLNQMGGAGNIMKLMK 478
Query: 479 QMGSTKDMMGM 489
+ D+ +
Sbjct: 479 EFSQNDDLQSL 489
>gi|386697393|gb|AFJ22157.1| signal recognition particle protein 54k, partial [Strelkoviacarus
aff. quadratus PBK-2011]
Length = 464
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/462 (58%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
++ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 LTTALRSLGNATIINQEVLDNLLKEICTALIESDVNIVLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LD G + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMILTAVFKELYKLLDSGAKLWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQSAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP++FIGTGEH+D FE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPILFIGTGEHIDAFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ ++ +LL+KL G+FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLEDTEDLLEKLRHGDFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
A++KR MT+MDS+++ ELDS KL + SR++R+ARG+G REV E+L +Y + A
Sbjct: 362 MARLKRMMTIMDSLSDSELDSREGAKLFSKQPSRLVRVARGAGVPQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ LS+N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LSKNVNPTQMAK-LNQQMAKMI 459
>gi|386697517|gb|AFJ22219.1| signal recognition particle protein 54k, partial [Myialges sp.
AD1127]
Length = 464
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/462 (58%), Positives = 352/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N+++ ++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRREIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMITVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFANENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL + ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASQAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + + G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFRSGD---LAKNVNPSQMAK-LNQQMAKMI 459
>gi|386697317|gb|AFJ22119.1| signal recognition particle protein 54k, partial [Leptosyringobia
longitarsa]
Length = 464
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/462 (57%), Positives = 352/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P++ P KGK +++MFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPAWQPIKGKANIVMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNA KA+IPFYGSYTESDPV IA EGVE F +E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNAHKARIPFYGSYTESDPVVIASEGVEKFIEEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQENSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y + A
Sbjct: 362 MLRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697687|gb|AFJ22304.1| signal recognition particle protein 54k, partial [Myocoptes
japonensis]
Length = 464
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/462 (58%), Positives = 349/462 (75%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ ++ AG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFGEMPAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQENTLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R++RG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRVIRVSRGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697289|gb|AFJ22105.1| signal recognition particle protein 54k, partial [Pterolichus
obtusus]
Length = 453
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 261/453 (57%), Positives = 349/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +V+MFVGLQG GKTTT TK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVVMFVGLQGIGKTTTVTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK+ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKEKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVMQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|82705448|ref|XP_726974.1| signal recognition particle protein SRP54 [Plasmodium yoelii yoelii
17XNL]
gi|23482603|gb|EAA18539.1| signal recognition particle protein SRP54 [Plasmodium yoelii
yoelii]
Length = 500
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 262/495 (52%), Positives = 362/495 (73%), Gaps = 11/495 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ A + D+ V+ ECL EI RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGAQLTSALQKIQAAPVADDNVIEECLKEIVRALILADINVIYLKDIKSNIKKNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G+NK+R++Q+ + EL K+L+ K S+ PKKG+ +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNAAAYGNNKKRLVQKYVVEELIKLLEGKKESYVPKKGERNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+QKKG+K AL+CADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV TF
Sbjct: 121 YAHYYQKKGFKTALICADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIATDGVNTFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ DLIIVD+SGRHKQE LFEEM+QV + P+ ++FV+DS IGQ+ DQA AFK SV
Sbjct: 181 KDKYDLIIVDSSGRHKQENDLFEEMKQVENSIKPEEIVFVIDSHIGQSCHDQAMAFKNSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG++I+TK+DGHAKGGGALSAV+A P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 241 KVGSIIITKIDGHAKGGGALSAVSAIGCPITFIGTGEHVNDFEKFEAKSFVSRLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G + + EV+ +++QP+L+ ++++G F LR MY+QFQN+ KMG + +V SM+PGF + L
Sbjct: 301 DGLVSTLKEVIDIEKQPQLINRIAKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGFGTNL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ KG EKE KIK+YM +MDSMTNEELD P +NDSR +RI +GSG ++ ++ E+LE
Sbjct: 361 ISKGTEKEGIDKIKKYMVIMDSMTNEELDCVKP--LNDSRCIRICKGSGTKLSDIKELLE 418
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK---VLPQGMLKQIGGVGGLQNLM 477
++K L K+ KM L + + M L RN Q MSK ++ M +GG + N++
Sbjct: 419 QFKFLQKMVLKMGKLGL-RDNNMGNLMRN-PKQFMSKMNNMMDPNMFNNMGGANNMVNML 476
Query: 478 KQMGSTKDMMGMFGG 492
K++ D FGG
Sbjct: 477 KELTKMDD----FGG 487
>gi|386697259|gb|AFJ22090.1| signal recognition particle protein 54k, partial [Picidectes
chapini]
Length = 453
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 261/453 (57%), Positives = 349/453 (77%), Gaps = 8/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV+ ++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKRLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELGRLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPF+GSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFFGSYTESDPVVIASEGVEKFSNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ ++ EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G +EV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVFQKEVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697429|gb|AFJ22175.1| signal recognition particle protein 54k, partial [Hemialges sp. n.
AD673]
Length = 464
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 267/462 (57%), Positives = 353/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT+SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATQSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDLEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ D Q +L++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES
Sbjct: 303 LKLEDNQ-DLIEKLKHGEFTIRDMYEQLTNIIKMGPFNQILNMIPGFGADLAKCATEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
++KR MT+MDSM++ ELDS KL + +R++R+ARG+G R+V E+L +Y + A
Sbjct: 362 MFRLKRMMTIMDSMSDTELDSREGAKLFSKQPTRVVRVARGAGVTQRDVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LNKNVNPSQMAK-LNQQMAKMI 459
>gi|428673047|gb|EKX73960.1| signal recognition particle 54kDa protein 2, putative [Babesia
equi]
Length = 496
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 264/493 (53%), Positives = 364/493 (73%), Gaps = 7/493 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+L I++A +++ T+I E V+ E + +I RALL ADV KLV +++ N+K++
Sbjct: 1 MVLAELSTQITQAFRKLHATTVISEAVIEEVIGDIVRALLLADVNVKLVHKLRENVKRLN 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G NKRR +Q+ + +EL ML K F PKKG+P+VIMFVGLQG+GKTT+CTK
Sbjct: 61 KNNADMIGANKRRYLQKIVVDELVSMLTTEKKPFEPKKGRPNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+AY++Q+KGW+ AL+CADTFRAGAFDQLKQNA K KI F+GSY+E++P ++A +GV FK
Sbjct: 121 FAYHYQRKGWRTALICADTFRAGAFDQLKQNAAKVKISFFGSYSEANPAKVAADGVARFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+IIVDTSGRHKQE ALFEEM+ + +A PD VIFVMDS IGQA +DQA AF ++V
Sbjct: 181 AEKYDMIIVDTSGRHKQEDALFEEMKLIHDAVQPDEVIFVMDSHIGQACYDQAAAFNKAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH D+FE F+ K F+SRLLG GD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHFDDFEQFEAKSFISRLLGFGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + +V+ +D++P+L+++L FT+R MY+QFQ++LKMGP+G+V SMLPG EL
Sbjct: 301 NGLVNTLKDVMNLDEKPDLMERLVNAKFTIRDMYDQFQSLLKMGPVGKVMSMLPGIPPEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ GRE+E A+IKR+M +MDSMT+EELD P + +SR++RIA+GSG EV+ +++
Sbjct: 361 LAAGREQEGVARIKRFMIIMDSMTDEELDCIKP--VTESRVLRIAKGSGSHPAEVVMLVD 418
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV---LPQGMLKQIGGVGGLQNLM 477
++K L K+ M + + K M + RN N Q +SK+ L +L+Q+GG G + LM
Sbjct: 419 QHKLLQKMVGGMGKMGLTKDTAMQNMLRNPN-QMLSKMQNFLDPRLLQQMGGPGTIMKLM 477
Query: 478 KQMGSTKDMMGMF 490
K+ S D +G F
Sbjct: 478 KEF-SQNDELGAF 489
>gi|386697287|gb|AFJ22104.1| signal recognition particle protein 54k, partial [Mesosathes sp.
AD1187]
Length = 464
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/462 (57%), Positives = 352/462 (76%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +V+MFVGLQG GKTTT TK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKANVVMFVGLQGIGKTTTVTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+M+SM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMESMSDSELDSREGAKLFSKQPTRIVRVARGSGVMQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKTGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|68072789|ref|XP_678308.1| signal recognition particle 54 kDa protein [Plasmodium berghei
strain ANKA]
gi|56498733|emb|CAH96838.1| signal recognition particle 54 kDa protein, putative [Plasmodium
berghei]
Length = 500
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 260/495 (52%), Positives = 360/495 (72%), Gaps = 11/495 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ A + D+ ++ ECL EI RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGAQLTNALQKIQAAPVADDNIIEECLKEIIRALILADINVIYLKDIKSNIKKNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G+NK+R++Q+ + EL K+L+ K S+ PKKG +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNAAAYGNNKKRLVQKYVVEELIKLLEGKKESYVPKKGDRNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+QKKG+K AL+CADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 YAHYYQKKGFKTALICADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIATDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ DLIIVD+SGRHKQE LFEEM+QV + P+ ++FV+DS IGQ+ DQA AFK SV
Sbjct: 181 KDKYDLIIVDSSGRHKQENDLFEEMKQVESSIKPEEIVFVIDSHIGQSCHDQAMAFKNSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG++I+TK+DGHAKGGGALSAV+A P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 241 KVGSIIITKIDGHAKGGGALSAVSAIGCPITFIGTGEHVNDFEKFEAKSFVSRLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G + + EV+ +++QP+L+ ++++G F LR MY+QFQN+ KMG + +V SM+PGF + L
Sbjct: 301 DGLVSTLKEVIDIEKQPQLINRIAKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGFGTNL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ KG EKE KIK+YM +MDSMTNEELD P +NDSR +RI +GSG ++ ++ E+LE
Sbjct: 361 ISKGTEKEGIDKIKKYMVIMDSMTNEELDCVKP--LNDSRCIRICKGSGTKLSDIKELLE 418
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK---VLPQGMLKQIGGVGGLQNLM 477
++K L K+ KM L + + M L RN Q MSK ++ M +GG + N++
Sbjct: 419 QFKFLQKMVLKMGKLGL-RDNNMGNLMRN-QKQFMSKMNNIMDPNMFNNMGGANNMVNML 476
Query: 478 KQMGSTKDMMGMFGG 492
K++ D FGG
Sbjct: 477 KELTKMDD----FGG 487
>gi|386697163|gb|AFJ22042.1| signal recognition particle protein 54k, partial [Roubikia sp.
AD863]
Length = 453
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/453 (59%), Positives = 347/453 (76%), Gaps = 9/453 (1%)
Query: 19 NATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQA 78
NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG NKRR+I A
Sbjct: 1 NATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFEEMAAGLNKRRMIMMA 60
Query: 79 IFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCAD 138
+F EL ++LDP + P KGK ++IMFVGLQG GKTTTCTK AY++ KKGWK ALVCAD
Sbjct: 61 VFRELVRLLDPDVAPWQPIKGKTNIIMFVGLQGIGKTTTCTKMAYHYMKKGWKCALVCAD 120
Query: 139 TFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQE 198
TFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE
Sbjct: 121 TFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQE 180
Query: 199 AALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGG 258
+LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGG
Sbjct: 181 NSLFEEMLAISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGG 240
Query: 259 ALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPE 318
ALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D E
Sbjct: 241 ALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEE 299
Query: 319 LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMT 378
L++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT
Sbjct: 300 LIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMT 359
Query: 379 MMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGL 435
+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A + KM G+
Sbjct: 360 IMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFAAVVKKMGGI 419
Query: 436 K-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
K + K G+ L++N+N M+K L Q M K I
Sbjct: 420 KGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 448
>gi|386697113|gb|AFJ22017.1| signal recognition particle protein 54k, partial [Pelzneria sp.
AD974]
Length = 449
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 264/450 (58%), Positives = 345/450 (76%), Gaps = 8/450 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
AI+ + NAT+I+++VL+ L EI AL++ADV LV++++ N++ I++ D++AAG NKR
Sbjct: 2 AIRSLGNATVINQEVLDNMLKEICAALIEADVNIMLVKKLRENVRNIIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F ELCK+LDPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+GWK
Sbjct: 62 RMIMMAVFQELCKLLDPGVKQWAPVKGRTNVVMFVGLQGIGKTTTVTKMAYYYMKRGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVNKFAKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE +LFEEM + AT+PDL ++VMD+SIGQA QA+AFK V +GA+IVTK+DG
Sbjct: 182 GRHKQENSLFEEMLAIQAATSPDLCVYVMDASIGQACEAQAKAFKSKVDIGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
++ EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF E+ E ES A+
Sbjct: 301 LEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPEISKCTSEAESAAR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL N +RI R+ARGSG R+V E+L +Y + A++
Sbjct: 361 LKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVARGSGVWRRDVQELLSQYTKFAQMV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
KM G+K + K G+ ++N+N M+K+
Sbjct: 421 KKMGGMKGLFKPGD---FAKNVNPMQMAKL 447
>gi|386697115|gb|AFJ22018.1| signal recognition particle protein 54k, partial [Myanoetus sp.
AD832]
Length = 449
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/450 (58%), Positives = 346/450 (76%), Gaps = 8/450 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
AI + NAT+I+++VL+ L EI AL++ADV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 AIWSLGNATVINQEVLDNMLKEICSALIEADVNILLVKKLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F ELCK+LDPG + P +G+ +V+MFVGLQG GKTTT TK AYY+ K+GWK
Sbjct: 62 RMIMMAVFTELCKLLDPGVKQWAPVRGRTNVVMFVGLQGIGKTTTVTKMAYYYMKRGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F+KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVNKFQKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE +LFEEM + AT+PDLV++VMD+SIGQA QA+AFK V +GA+IVTK+DG
Sbjct: 182 GRHKQENSLFEEMLAIQAATSPDLVVYVMDASIGQACEAQAKAFKSKVDIGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
++ EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF E+ E ES A+
Sbjct: 301 LEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPEMSKCTSEAESAAR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL N +RI R+ARGSG R+V E+L +Y + A++
Sbjct: 361 LKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVARGSGVWRRDVQELLSQYTKFAQMV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
KM G+K + K G+ ++N+N M+K+
Sbjct: 421 KKMGGMKGLFKPGD---FAKNVNPMQMAKL 447
>gi|386697533|gb|AFJ22227.1| signal recognition particle protein 54k, partial [Trochiloptes sp.
AD1143]
Length = 464
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 270/461 (58%), Positives = 348/461 (75%), Gaps = 7/461 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI +AL+++DV KLV++++ N++ I++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICKALIESDVNIKLVKKLRENVRSIIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKPWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D+ EL++KL G FT+R MYEQ N +KMGPI Q+ SM+PGF +EL E E+
Sbjct: 303 -LKLDENEELIEKLKHGEFTIRDMYEQITNFMKMGPINQILSMIPGFGAELAQCTSEAET 361
Query: 370 QAKIKRYMTMMDSMTNEELDSSN-PKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELD+ + KL +R R+ARG+G R+V E+L +Y +
Sbjct: 362 MSRLKRMMTIMDSMSDTELDARDGTKLFYKQPNRFARVARGAGVSQRDVQELLSQYNKFK 421
Query: 427 KIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K KG L++N++ M K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKG--GDLNKNVHPTQMFK-LNQQMAKMI 459
>gi|84998408|ref|XP_953925.1| signal recognition particle 54kDa protein 2 [Theileria annulata]
gi|65304923|emb|CAI73248.1| signal recognition particle 54kDa protein 2, putative [Theileria
annulata]
Length = 495
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 256/491 (52%), Positives = 355/491 (72%), Gaps = 4/491 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+L I++A +++ + T+I E V+ E + +I RALL ADV KLV +++ N+K++
Sbjct: 1 MVLAELSNQITQAFRKLHSTTVISEAVIEEVIGDIVRALLMADVNVKLVHKLKENVKRLN 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G NKRR +Q+ + +EL ML K F PKKG+ +VIMFVGLQG+GKTT+CTK
Sbjct: 61 KNNSDMIGANKRRYLQKIVVDELVNMLTTEKKPFEPKKGRCNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+AY++Q+KGW+ AL+CADTFRAGAFDQLKQNA K KI FYGSY+E++P ++A +GV FK
Sbjct: 121 FAYHYQRKGWRTALICADTFRAGAFDQLKQNAAKVKISFYGSYSEANPAKVAADGVARFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E D+IIVDTSGRHKQE ALF+EM+ + +A PD V+FVMDS IGQA +DQA AF ++V
Sbjct: 181 EEKYDMIIVDTSGRHKQEDALFDEMKLIYDAVQPDEVVFVMDSHIGQACYDQASAFNKAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAV+AT SP+IFIGTGEH D+FE FD K F+SRLLG GD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVSATNSPIIFIGTGEHFDDFEPFDPKSFISRLLGFGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + +V+ ++ +P+LL +++ FT+R MY+QFQN+LKM PIG+V SMLPG EL
Sbjct: 301 NGLINTLKDVINLEDKPDLLDRIASAKFTIRDMYDQFQNLLKMAPIGKVMSMLPGIPPEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ GRE+E +IKR+M +MDSMT+EELD P +N +RIMRIA+GSG E+ +++
Sbjct: 361 LQAGREQEGVDRIKRFMIIMDSMTDEELDCEKP--LNGTRIMRIAKGSGSSPHEINFLID 418
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQNLMK 478
++K L K+ M + + K M + RN N M ++ +L Q+GG G + LMK
Sbjct: 419 QHKTLQKMVGSMGKMGLNKDNAMQNIMRNPNQLLNKMQSMIDPRLLNQMGGAGNIMKLMK 478
Query: 479 QMGSTKDMMGM 489
+ D+ +
Sbjct: 479 EFSQNDDLQSL 489
>gi|403221209|dbj|BAM39342.1| signal recognition particle protein 2 [Theileria orientalis strain
Shintoku]
Length = 495
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 259/491 (52%), Positives = 353/491 (71%), Gaps = 4/491 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+L I++A +++ + T+I E V+ E + +I RALL ADV KLV +++ NIK+
Sbjct: 1 MVLAELSTQITQAFRKLHSTTVISEAVIEEVIGDIVRALLMADVNVKLVHKLKENIKRQN 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G NKRR +Q+ + +EL ML K + P KGKP+VIMFVGLQG+GKTT+CTK
Sbjct: 61 KNNADMIGANKRRYLQKVVVDELVAMLTTEKKPYVPVKGKPNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+AY++Q+KGW+ AL+CADTFRAGAFDQLKQNA K KI FYGSY+E++P ++A +GV FK
Sbjct: 121 FAYHYQRKGWRTALICADTFRAGAFDQLKQNAAKVKISFYGSYSEANPAKVAADGVARFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+IIVDTSGRHKQE ALF+EMR + EA PD V+FVMDS IGQA +DQA AF +V
Sbjct: 181 AEKYDMIIVDTSGRHKQEEALFDEMRLIHEAVQPDEVVFVMDSHIGQACYDQASAFNSAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAV+AT SP+IFIGTGEH D+FE F+ K F+SRLLG GD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVSATNSPIIFIGTGEHFDDFEPFEPKSFISRLLGFGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + +V+ ++ +P+LL +L+ FT+R MY+QFQN+LKM PIG+V SMLPG EL
Sbjct: 301 NGLINTLKDVINLEDKPDLLDRLASAKFTIRDMYDQFQNLLKMAPIGKVMSMLPGIPPEL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ GRE+E +IKR+M +MDSMT+EELD P N SR++RIA+GSG ++ +LE
Sbjct: 361 LQAGREQEGVDRIKRFMIIMDSMTDEELDCEKP--FNSSRVLRIAKGSGTSPNDINVLLE 418
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQNLMK 478
++K L K+ M + + K + L RN N M ++ +L+Q+GG G + LM+
Sbjct: 419 QHKLLQKMVGSMGKMGLTKDNAVQNLMRNPNQLMNKMQSMMDPKILQQMGGPGTIMKLMR 478
Query: 479 QMGSTKDMMGM 489
+ +DM +
Sbjct: 479 EFSQNEDMQSL 489
>gi|386697519|gb|AFJ22220.1| signal recognition particle protein 54k, partial [Promyialges sp.
AD1177]
Length = 464
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/462 (57%), Positives = 351/462 (75%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N+++ ++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRREIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +F EL K+LDP + P K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMITVFQELVKLLDPEVKVWQPVKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVARGAGVTQREVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + + G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFRSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|399218124|emb|CCF75011.1| unnamed protein product [Babesia microti strain RI]
Length = 494
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/491 (53%), Positives = 366/491 (74%), Gaps = 6/491 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++++ AT+ID +++E + +I R+LL ADV K VR++Q N+KK +
Sbjct: 1 MVLAELGSQINGALRKLYCATVIDNTIIDEVIKDIVRSLLMADVNVKYVRQLQDNVKKAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G N+R++IQ+ IF+E+ ++ ++ PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 YQGNEIVGANRRKLIQKTIFSEIVNLMTAKNEAYVPKKGKRNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
Y +Y+Q+KG L+CADTFRAGAFDQLKQNATKAKIPFYGSYTE++PV++A +GV+ FK
Sbjct: 121 YGHYYQRKGM-TGLICADTFRAGAFDQLKQNATKAKIPFYGSYTEANPVKVARDGVDKFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E DLIIVDTSGRHKQ+ +L EEM+Q++ A PD ++FV+DS IGQA +DQA AF ++V
Sbjct: 180 SEKYDLIIVDTSGRHKQQESLLEEMKQIATA-EPDDIVFVLDSHIGQACYDQALAFCKAV 238
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+VI+TK+DGHAKGGGA+SAV+AT SP+IFIGTGEH D+FE FD + FVSRLLG GD
Sbjct: 239 NVGSVIITKLDGHAKGGGAISAVSATNSPIIFIGTGEHFDDFEPFDPQSFVSRLLGFGDI 298
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ EVV + E ++++S+G F+LR MY+QFQN+LKMGP+GQV SM+PG SS +
Sbjct: 299 NGLINTFKEVVENNGNNESIERISKGKFSLRDMYDQFQNVLKMGPMGQVMSMIPGISSNI 358
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ KG+E+E A+IKR+M +MDSMT+EELD K + DSR MRIARGSG + E+ ++E
Sbjct: 359 IGKGQEQEGVARIKRFMVIMDSMTDEELDCE--KQITDSRSMRIARGSGCTIFEIKALIE 416
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMN--AQHMSKVLPQGMLKQIGGVGGLQNLMK 478
++K L K+ KM + + K+ M ++ RN M ++ +LKQ+GG L N++K
Sbjct: 417 QHKLLHKMVGKMGKMGLNKESAMQSVMRNPQQIVSRMQNMIDPRLLKQMGGASNLVNIIK 476
Query: 479 QMGSTKDMMGM 489
+ +D+ +
Sbjct: 477 EFSQREDLQAL 487
>gi|156100321|ref|XP_001615888.1| signal recognition particle 54 kDa protein [Plasmodium vivax Sal-1]
gi|148804762|gb|EDL46161.1| signal recognition particle 54 kDa protein, putative [Plasmodium
vivax]
Length = 500
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 255/490 (52%), Positives = 362/490 (73%), Gaps = 5/490 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ + + D+ + ECL E+ RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGTQLTCALQKLQASAVADDSAIEECLKEVMRALILADINISYLKDIKSNIKKNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G+NK+R++QQ + EL +L+ K S+ PKKG +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNIDLYGNNKKRLVQQYVVEELINLLEGKKESYVPKKGSRNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A+Y+QKKG+K ALVCADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 FAHYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIASDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVD+SGRHKQE+ LFEEM+QV + P+ ++FV+DS IGQ+ DQA AFK SV
Sbjct: 181 KEKYDLIIVDSSGRHKQESELFEEMKQVESSIRPEEIVFVIDSHIGQSCHDQAMAFKNSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
++G++I+TK+DGHAKGGGALSAVA+T P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 241 TLGSIIITKIDGHAKGGGALSAVASTGCPITFIGTGEHINDFENFEAKSFVSRLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G + + EV+ +++QP+L+ +LS+G F LR MY+QFQN+ KMG + +V SM+PGF + L
Sbjct: 301 NGLVSTLKEVIDIEKQPQLINRLSKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGFGNNL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ KG EKE KIK++M +MDSMTNEELD P +NDSR +RI +GSG +++++ E+LE
Sbjct: 361 ISKGTEKEGIEKIKKFMVIMDSMTNEELDCVKP--LNDSRCLRICKGSGTRLQDIRELLE 418
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQNLMK 478
++K L + SKM L + ++ +++L RN M+ + ML Q+GG + N++K
Sbjct: 419 QFKFLKNMVSKMGKLGL-RENNLNSLMRNQKHFLSKMNNFIDPSMLGQMGGPNNMVNILK 477
Query: 479 QMGSTKDMMG 488
+ D+ G
Sbjct: 478 EFTKMDDLGG 487
>gi|386697567|gb|AFJ22244.1| signal recognition particle protein 54k, partial [Ingrassia
philomachi]
Length = 444
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/444 (60%), Positives = 339/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F ELCK+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA GVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASGGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A PDLVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIEPDLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M K I
Sbjct: 419 --LTKNVNPAQMAK-LNQQMAKMI 439
>gi|386697525|gb|AFJ22223.1| signal recognition particle protein 54k, partial [Passeroptes sp.
AD636]
Length = 460
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/458 (58%), Positives = 346/458 (75%), Gaps = 7/458 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI +AL+++DV KLV++++ N++ I++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICKALIESDVNIKLVKKLRENVRSIIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLLDPEVKPWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLIVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D+ EL++KL G FT+R MYEQ N +KMGPI Q+ SM+PGF +EL E ES ++
Sbjct: 301 LDENEELIEKLKHGEFTIRDMYEQITNFMKMGPINQILSMIPGFGAELAQCTSEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDSSN-PKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELD+ + KL +R R++RG+G R+V ++L +Y + +
Sbjct: 361 LKRMMTIMDSMSDTELDARDGTKLFYKQPNRFSRVSRGAGVTQRDVQDLLSQYNKFKAVV 420
Query: 430 SKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+M G+K KG L++N+N M K L Q M K I
Sbjct: 421 KRMGGIKGLFKG--GDLNKNVNPTQMLK-LNQQMAKMI 455
>gi|386697253|gb|AFJ22087.1| signal recognition particle protein 54k, partial [Alcedinectes
alcyon]
Length = 458
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/459 (57%), Positives = 349/459 (76%), Gaps = 9/459 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NA II+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNAPIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL ++LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIMMAVFKELVRLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPF+GSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFFGSYTESDPVVIASEGVEKFTNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+I+TK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIITKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAAT SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATNSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
++ EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES ++
Sbjct: 301 LEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A +
Sbjct: 361 LKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVMQREVQELLSQYTKFAAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 KKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 455
>gi|386697335|gb|AFJ22128.1| signal recognition particle protein 54k, partial [Hieracolichus
nisi]
Length = 444
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/444 (59%), Positives = 341/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F L K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFRNLVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG P++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVPAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M K I
Sbjct: 419 --LTKNVNPAQMAK-LNQQMAKMI 439
>gi|386697143|gb|AFJ22032.1| signal recognition particle protein 54k, partial [Nanacarus sp.
AD545]
Length = 447
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 254/438 (57%), Positives = 338/438 (77%), Gaps = 5/438 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICSALIESDVNIRLVKQLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A++ ELCK++DPG ++ P KG+ +V+MFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMMAVYQELCKLIDPGVKAWQPVKGRSNVVMFVGLQGIGKTTTCTKLAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSY ESDPV IA EGV+ F EN D+IIV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYVESDPVVIAAEGVDKFTNENFDIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A PDL+I+VMD+SIGQA QA+AF V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTAVQPDLIIYVMDASIGQACEAQARAFSSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH++EFE F KPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHINEFEQFKAKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D+ +L+ KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 -LKLDENDQLIDKLKHGEFTLRDMYEQLANIMKMGPFSQILNMIPGFGAELSNCTSEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDSSNPK---LMNDSRIMRIARGSGRQVREVMEMLEEYKRLA 426
+K+KR MT+MDSM++ ELDS + L +R+ R+ARG+G EV E+L ++ + A
Sbjct: 362 MSKLKRMMTIMDSMSDGELDSRDGSKLFLKQPTRVARVARGAGMTRAEVKELLTQFTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEM 443
+ KM G+K + K G+M
Sbjct: 422 AVVKKMGGIKGLFKSGDM 439
>gi|386697529|gb|AFJ22225.1| signal recognition particle protein 54k, partial [Passeroptes sp.
AD882]
Length = 460
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 267/458 (58%), Positives = 344/458 (75%), Gaps = 7/458 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI +AL+++DV KLV+ ++ N++ I++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICKALIESDVNIKLVKNLRENVRSIIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLLDPEVKPWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLIVYVMDASIGQACESQARAFKDKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+D+ EL++KL G FT+R MYEQ N +KMGPI Q+ SM+PGF +EL E ES ++
Sbjct: 301 LDENDELIEKLKHGEFTIRDMYEQITNFMKMGPINQILSMIPGFGAELAQCTSEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDSSN-PKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELD+ + KL R R++RG+G R+V E+L +Y + +
Sbjct: 361 LKRMMTIMDSMSDTELDARDGTKLFYKQPKRFFRVSRGAGVTPRDVQELLGQYNKFRAVV 420
Query: 430 SKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+M G+K +G L++N+N M K L Q M K I
Sbjct: 421 KRMGGIKGLFRG--GDLNKNVNPTQMLK-LNQQMAKMI 455
>gi|386697323|gb|AFJ22122.1| signal recognition particle protein 54k, partial [Gabucinia
delibata]
Length = 444
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 263/444 (59%), Positives = 341/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F L K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFRNLVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG P++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVPAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARGSG REV E+L +Y + A + KM G+K + + G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFRSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M K I
Sbjct: 419 --LAKNVNPAQMAK-LNQQMAKMI 439
>gi|386697205|gb|AFJ22063.1| signal recognition particle protein 54k, partial [Horstia glabra]
Length = 444
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 265/444 (59%), Positives = 341/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV +LV++++ N++ +++ D++AAG NKRR+I A+FNEL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIQLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFNELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYLRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 ISAAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATG 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM + E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+RIARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGTKLFSKQPTRIVRIARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M + I
Sbjct: 419 --LAKNVNPAQMAK-LNQQMARMI 439
>gi|386697255|gb|AFJ22088.1| signal recognition particle protein 54k, partial [Hypodectes sp.
AD946]
Length = 459
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 261/459 (56%), Positives = 350/459 (76%), Gaps = 9/459 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV+ ++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKRLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL ++LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIMMAVFKELGRLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYLRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPF+GSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFFGSYTESDPVVIASEGVEKFTNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+L+++VMD+SIGQA QA+AFK V VGA+I+TK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIITKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAAT SP+IFIGTGEH+DEFE F+VK F+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATNSPIIFIGTGEHIDEFEQFNVKSFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
++ EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES ++
Sbjct: 301 LEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS KL + +RI+R+ARG+G +EV E+L +Y + A +
Sbjct: 361 LKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVMQKEVQELLSQYTKFAAVV 420
Query: 430 SKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 KKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 455
>gi|386697523|gb|AFJ22222.1| signal recognition particle protein 54k, partial [Neodermation sp.
AD858]
Length = 459
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/458 (58%), Positives = 348/458 (75%), Gaps = 8/458 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++K+++ +++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICTALIESDVNILLVKQLRENVRKVIDFEEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP ++ P KGK +V+MFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLLDPEVKAWQPVKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A PDLV++VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPDLVVYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G MDK+ ++
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLMDKVSQLKL 301
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
D + EL++KL G FT+R MYEQ N +KMGP+ Q+ +M+PG +EL E ES A+
Sbjct: 302 GDNE-ELIEKLKHGEFTIRDMYEQITNFMKMGPLNQILNMIPGIGAELAKCTSEAESYAR 360
Query: 373 IKRYMTMMDSMTNEELDSSN-PKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS + KL +R++R++RG+G REV+E++ +Y + +
Sbjct: 361 LKRMMTIMDSMSDSELDSRDGGKLFAKQPTRVLRVSRGAGVTQREVIELISQYTKFKAVV 420
Query: 430 SKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
KM G+K KG+ LS+++N +K L Q M K I
Sbjct: 421 KKMGGIKGLFKGD---LSKSINPLQFAK-LNQQMAKII 454
>gi|326920725|ref|XP_003206619.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Meleagris gallopavo]
Length = 474
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 274/504 (54%), Positives = 362/504 (71%), Gaps = 47/504 (9%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLREN----- 55
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++DPG ++TP KGK ++IMFVGLQGSGKTTTC+K
Sbjct: 56 -------------------------LVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTTCSK 90
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK L+CADT+RAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 91 LAYFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 150
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 151 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 210
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 211 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 270
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 271 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 329
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E
Sbjct: 330 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQE 389
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +GG
Sbjct: 390 LLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQLAKLNQQMAKMMDPRVLHHMGG 446
Query: 470 VGGLQNLMKQM--GSTKDMMGMFG 491
+ GLQ++M+Q G+ +M GM G
Sbjct: 447 MAGLQSMMRQFQQGAAGNMKGMMG 470
>gi|386697547|gb|AFJ22234.1| signal recognition particle protein 54k, partial [Trouessartia sp.
n. AD768]
Length = 444
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 264/444 (59%), Positives = 340/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R++RGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLNQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M++ L Q M K I
Sbjct: 419 --LAKNVNPAQMAR-LNQQMAKMI 439
>gi|145351050|ref|XP_001419900.1| IISP family transporter: Signal recognition particle 54 kDa protein
(SRP54) [Ostreococcus lucimarinus CCE9901]
gi|144580133|gb|ABO98193.1| IISP family transporter: Signal recognition particle 54 kDa protein
(SRP54) [Ostreococcus lucimarinus CCE9901]
Length = 513
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 265/512 (51%), Positives = 367/512 (71%), Gaps = 21/512 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A++ ++ ++DE++L+ CL +IT ALL +DV LV M+ NI + V
Sbjct: 1 MVLNDLGNKIASALRSLNAHVVVDEELLDACLKDITNALLASDVAVPLVVRMKKNIVREV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPG-------------KPSFTPKKGKPSVIMFV 107
+LD++A+G N ++++++A+F EL +L+ G ++TPKKGK +V+MFV
Sbjct: 61 DLDNMASGMNAKKVLERAVFKELTALLNGGGDASGTKTSGTKTSGTWTPKKGKRNVVMFV 120
Query: 108 GLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD 167
GLQG+GKTTTCTK+A+Y+ KKG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD
Sbjct: 121 GLQGAGKTTTCTKFAHYYAKKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD 180
Query: 168 PVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQ 227
P IA GV+ F++E DLIIVDTSGRHKQE ALFEEMR+++ T P + IFVMDSSIGQ
Sbjct: 181 PATIAAAGVKRFEEEKSDLIIVDTSGRHKQEEALFEEMREIASVTEPTMTIFVMDSSIGQ 240
Query: 228 AAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDV 287
+A DQA+AF +V VG VI+TK+DGHAKGGGA+SAV+ TK+P++FIGTGEH+ E E F+
Sbjct: 241 SASDQAKAFASTVDVGGVIMTKLDGHAKGGGAISAVSETKAPILFIGTGEHIGELEAFET 300
Query: 288 KPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIG 347
FVS+LLGMGD G ++K++E+VP + +L++ G FT+R++YEQFQN+ MGPI
Sbjct: 301 TSFVSKLLGMGDIKGLVEKMNEIVPEESAEKLMEAFGSGTFTMRLLYEQFQNLQNMGPIS 360
Query: 348 QVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNP-KLMNDSRIMRIAR 406
+ SM+PG ++++PKG E++ ++K M +MDSMT+ ELD+ N K+ N R+ R+ R
Sbjct: 361 SIMSMVPGM-ADMIPKGGEEQGTKRMKSMMVLMDSMTDAELDAPNASKIFNVKRMERVCR 419
Query: 407 GSGRQVREVMEMLEEYKRLAKIWSKMKGLKIP----KKGEMSALSRNMNAQHMSKVLPQG 462
G+GR E++ +LEE+KRL K+ KMKG+K+P +G + + M+ LP
Sbjct: 420 GAGRLPSEMITLLEEHKRLGKMMGKMKGIKMPGAGGARGRGNPQAMQQQMSQMANALPPD 479
Query: 463 MLKQIGGVGGLQNLMKQMG--STKDMMGMFGG 492
ML+ +GG G+ N+MKQ K M GM G
Sbjct: 480 MLRMMGGQQGMMNMMKQFEGMDPKAMQGMMKG 511
>gi|386697213|gb|AFJ22067.1| signal recognition particle protein 54k, partial [Acarus siro]
gi|386697215|gb|AFJ22068.1| signal recognition particle protein 54k, partial [Acarus immobilis]
Length = 444
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 265/444 (59%), Positives = 339/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++K+++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIILVKQLRENVRKVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIATEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+I+VMD+SIGQA QA+AF V VGAVIVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIIYVMDASIGQACEAQARAFSSKVDVGAVIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM + E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVARGAGVMTREVQELLSQYTKFAAVVKKMGGIKGLFKTGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M + I
Sbjct: 419 --LAKNVNPAQMAK-LNQQMARMI 439
>gi|386697135|gb|AFJ22028.1| signal recognition particle protein 54k, partial [Suidasia
nesbitti]
Length = 433
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 259/435 (59%), Positives = 336/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+Q+KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPAKGRTNVIMFVGLQGIGKTTTCTKMAYYYQRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 419 --LAKNVNPAQMAKL 431
>gi|386697191|gb|AFJ22056.1| signal recognition particle protein 54k, partial [Nycteriglyphites
pennsylvanicus]
Length = 444
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 263/444 (59%), Positives = 340/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICKALIESDVNIMLVKKLRENVRSVIDFEEMAAGLNKRRMIMMAVFTELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGW+ ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKPWQPVKGKVNVIMFVGLQGIGKTTTCTKMAYYYMRKGWRCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSY ESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYAESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAIQPNLVVYVMDASIGQACESQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCASEAESMSRLKRMMTVMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVARGSGVTTREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M K I
Sbjct: 419 --LAKNVNPAQMAK-LNQQMAKMI 439
>gi|386697221|gb|AFJ22071.1| signal recognition particle protein 54k, partial [Sancassania aff.
sphaerogaster AD361]
Length = 433
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 259/435 (59%), Positives = 335/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEVVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P +++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPQQIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 419 --LTKNVNPSQMAKL 431
>gi|386697487|gb|AFJ22204.1| signal recognition particle protein 54k, partial [Otodectes
cynotis]
Length = 444
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/444 (59%), Positives = 339/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I +A+F ELCK+L
Sbjct: 1 LDGLLKEICTALIESDVNIMLVKQLRENVRNVIDFDEMAAGLNKRRMIMRAVFQELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKTWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIVDTSGRHKQE +LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIVDTSGRHKQENSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A DLVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQSDLVIYVMDASIGQACEPQARAFKAKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + +D EL++K+ G
Sbjct: 241 SPIIFIGTGEHIDEFESFKVRPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKIKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R++RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVSRGAGCTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M K I
Sbjct: 419 --LAKNVNPAQMAK-LNQQMAKMI 439
>gi|386697181|gb|AFJ22051.1| signal recognition particle protein 54k, partial [aff. Alabidopus
sp. AD591]
Length = 433
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/435 (59%), Positives = 337/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIMLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++TP KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWTPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+I+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIIYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + ++ EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM + E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKGTSEAESMSRLKRMMTIMDSMADSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+RIARGSG REV E+L +Y + A++ KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRIARGSGVTQREVQELLSQYTKFAQVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M+++
Sbjct: 419 --LAKNVNPAQMARL 431
>gi|386697171|gb|AFJ22046.1| signal recognition particle protein 54k, partial [Chaetodactylus
lithurgi]
Length = 431
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 259/435 (59%), Positives = 335/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL ++L
Sbjct: 1 LDSLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGLNKRRMIMMAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKPWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE +LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQENSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M K+
Sbjct: 419 --LAKNVNPAQMXKL 431
>gi|386697401|gb|AFJ22161.1| signal recognition particle protein 54k, partial [Neumannia sp.
AD1196]
Length = 444
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/444 (59%), Positives = 338/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES ++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMHRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R++RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+NA M+K L Q M K I
Sbjct: 419 --LAKNVNASQMAK-LNQQMAKMI 439
>gi|386697149|gb|AFJ22035.1| signal recognition particle protein 54k, partial [Vidia sp. AD452]
Length = 432
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 258/434 (59%), Positives = 333/434 (76%), Gaps = 6/434 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV KLV++++ N++ +++ D++AAG NKR++I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIKLVKQLRENVRTVIDFDEMAAGLNKRKMIMTAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KK WK +LVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKNWKCSLVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIATEGVEKFANENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A PDL+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAIQPDLIVYVMDASIGQACEAQAKAFKGKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM + E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMS 444
LDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K KG
Sbjct: 360 LDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKG--G 417
Query: 445 ALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 418 DLTKNVNPTQMAKL 431
>gi|386697121|gb|AFJ22021.1| signal recognition particle protein 54k, partial [Hormosianoetus
mallotae]
Length = 432
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/435 (60%), Positives = 337/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI ALL++DV LV++++ N++K+++ D++AAG NKRR+I A+F ELCK+L
Sbjct: 1 LDNMLKEICAALLESDVNILLVKKLRENVRKVIDFDEMAAGLNKRRMIMMAVFQELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+GWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKMAYYYMKRGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIAADGVSKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ AT+PDLV++VMD+SIGQA QA+AFK V +GA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAATSPDLVVYVMDASIGQACESQAKAFKSKVDIGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SPVIFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + ++ EL++KL G
Sbjct: 241 SPVIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF EL E ES A++KR MT+MDSM++ E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGPELSKCTSEAESAARLKRMMTIMDSMSDNE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL N +RI R+ARG+G REV E+L +Y + A++ KM G+K + K+G+
Sbjct: 360 LDSREGAKLFNRQPNRIARVARGAGVWRREVQELLSQYTKFAQMVKKMGGMKGLFKQGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 419 --LTKNVNPMQMAKL 431
>gi|386697479|gb|AFJ22200.1| signal recognition particle protein 54k, partial [Paralgopsis sp.
AD1163]
Length = 444
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/444 (59%), Positives = 339/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++++++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +R++R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M K I
Sbjct: 419 --LTKNVNPAQMAK-LNQQMAKMI 439
>gi|386697241|gb|AFJ22081.1| signal recognition particle protein 54k, partial [Ewingia
coenobitae]
Length = 444
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/444 (59%), Positives = 340/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNILLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTLRDMYEQLANIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDAE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+RIARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRIARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M + I
Sbjct: 419 --LTKNVNPAQMAK-LNQQMARMI 439
>gi|432937583|ref|XP_004082449.1| PREDICTED: signal recognition particle 54 kDa protein-like, partial
[Oryzias latipes]
Length = 385
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 248/386 (64%), Positives = 315/386 (81%), Gaps = 1/386 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 AENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACESQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +D+++E + +D EL+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGF ++
Sbjct: 301 EGLIDRVNE-LKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNE 386
M KG E+ES A++K+ MT+MDSM ++
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQ 385
>gi|386697611|gb|AFJ22266.1| signal recognition particle protein 54k, partial [Monojoubertia
hemiphylla]
Length = 433
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/435 (59%), Positives = 335/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +R++R++RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRLVRVSRGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N+ M K+
Sbjct: 419 --LTKNVNSAQMLKL 431
>gi|386697187|gb|AFJ22054.1| signal recognition particle protein 54k, partial [Chortoglyphus sp.
AD792]
Length = 444
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/444 (59%), Positives = 340/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIILVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++TP KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWTPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM + E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKGTSEAESMSRLKRMMTIMDSMADCE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS K + +RI+R+ARGSG REV E+L +Y + A++ KM G+K + K G+
Sbjct: 360 LDSREGAKFFSKQPTRIVRVARGSGVTQREVQELLSQYTKFAQVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
LS+N+N M++ L Q M + I
Sbjct: 419 --LSKNVNPAQMAR-LNQQMARMI 439
>gi|386697459|gb|AFJ22190.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
n. AD747]
Length = 444
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/444 (59%), Positives = 339/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++++++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPEVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +R++R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M K I
Sbjct: 419 --LTKNVNPAQMAK-LNQQMAKMI 439
>gi|386697111|gb|AFJ22016.1| signal recognition particle protein 54k, partial [Aphodanoetus
teinophallus]
Length = 444
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/435 (59%), Positives = 335/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L E+ AL+++DV LV++++ NI+ +++ D++AAG NKRR+I A+F ELCK+L
Sbjct: 1 LDNMLKEVCAALIESDVNIMLVKKLRENIRNVIDFDEMAAGLNKRRMIMMAVFQELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG P + P KG+ +V+MFVGLQG GKTTT TK AY++ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVPQWAPVKGRTNVVMFVGLQGIGKTTTVTKMAYHYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA +GV F+KEN +++IVDTSGRHKQE +LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIAADGVNKFQKENFEIVIVDTSGRHKQENSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ AT+PDLV++VMD+SIGQA QA+AFK V +GA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAATSPDLVVYVMDASIGQACEAQARAFKSKVDIGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +++ EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFESFKVKPFISKLLGMGDIEGLIDKVNE-LKLEENDELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ M+PGF E+ E ES A++KR MT+MDSM++ E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILGMIPGFGPEMAQGASEAESAARLKRMMTIMDSMSDGE 359
Query: 388 LDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL N SRI RIARG+G REV E+L +Y + A++ KM G+K + K G+
Sbjct: 360 LDSREGAKLFNRQPSRIARIARGAGVWKREVAELLSQYTKFAQMVKKMGGMKGLFKPGD- 418
Query: 444 SALSRNMNAQHMSKV 458
S+N+N M+K+
Sbjct: 419 --FSKNVNPMQMAKL 431
>gi|386697233|gb|AFJ22077.1| signal recognition particle protein 54k, partial [Naiacus sp.
AD305]
Length = 433
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 259/435 (59%), Positives = 336/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPTKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+I+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIIYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 419 --LTKNVNPAQMAKL 431
>gi|386697237|gb|AFJ22079.1| signal recognition particle protein 54k, partial [Askinasia sp.
AD304]
Length = 433
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/435 (59%), Positives = 336/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNILLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES ++KR MT+MDSM++ E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMFRLKRMMTIMDSMSDAE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+RIARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRIARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 419 --LTKNVNPAQMAKL 431
>gi|386697211|gb|AFJ22066.1| signal recognition particle protein 54k, partial [Diadasiopus
eickworti]
Length = 433
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 259/435 (59%), Positives = 335/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++K+++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIILVKQLRENVRKVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTSENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AF V VGAVIVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIVYVMDASIGQACEAQARAFSSKVDVGAVIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM + E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVARGAGVMTREVQELLSQYTKFAAVVKKMGGIKGLFKTGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 419 --LAKNVNPAQMAKL 431
>gi|386697277|gb|AFJ22099.1| signal recognition particle protein 54k, partial [Falculifer sp.
AD1244]
Length = 444
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 262/444 (59%), Positives = 339/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACEAQARAFKDKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRXMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R++RGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
LS+N+N M+K L Q M K I
Sbjct: 419 --LSKNVNPAQMAK-LNQQMAKMI 439
>gi|349605055|gb|AEQ00420.1| Signal recognition particle 54 kDa protein-like protein, partial
[Equus caballus]
Length = 454
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 262/451 (58%), Positives = 349/451 (77%), Gaps = 11/451 (2%)
Query: 51 EMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQ 110
+++ N+K ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQ
Sbjct: 1 QLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQ 60
Query: 111 GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
GSGKTTTC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV
Sbjct: 61 GSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVI 120
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAF 230
IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA
Sbjct: 121 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACE 180
Query: 231 DQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 290
QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF
Sbjct: 181 AQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPF 240
Query: 291 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVF 350
+S+LLGMGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+
Sbjct: 241 ISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQIL 299
Query: 351 SMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARG 407
M+PGF ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARG
Sbjct: 300 GMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARG 359
Query: 408 SGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQG 462
SG R+V E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++
Sbjct: 360 SGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPR 419
Query: 463 MLKQIGGVGGLQNLMKQM--GSTKDMMGMFG 491
+L +GG+ GLQ++M+Q G+ +M GM G
Sbjct: 420 VLHHMGGMAGLQSMMRQFQQGAAGNMKGMMG 450
>gi|386697423|gb|AFJ22172.1| signal recognition particle protein 54k, partial [Diplaegidia
columbae]
Length = 444
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/435 (59%), Positives = 334/435 (76%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L E L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LEELLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + ++ EL+ KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIAKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARGSG REV E+L +Y + + + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKFSAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 419 --LAKNVNPAQMAKL 431
>gi|386697577|gb|AFJ22249.1| signal recognition particle protein 54k, partial [Proctophyllodes
dolephyes]
Length = 444
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 259/435 (59%), Positives = 335/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS K+ + +R++R++RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKIFSKQPTRLVRVSRGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N+ M K+
Sbjct: 419 --LAKNVNSAQMLKL 431
>gi|403371696|gb|EJY85731.1| Signal recognition particle 54 kDa protein, putative [Oxytricha
trifallax]
Length = 561
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 268/489 (54%), Positives = 364/489 (74%), Gaps = 5/489 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS+A+++++ AT+IDEKVL + L EI ALL ADV K V +++ +K IV
Sbjct: 1 MVLAELGQKISQALRKLNTATVIDEKVLGDILTEIASALLSADVNIKYVAKLRDAVKTIV 60
Query: 61 NLDDLAAG-HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
L AG N R++IQQ + EL ML+ + KKGKP+V+MFVGLQGSGKTTTCT
Sbjct: 61 TLQMSQAGVANIRKLIQQTVVQELTNMLESENRPYEFKKGKPNVVMFVGLQGSGKTTTCT 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K+AY++ +KGW+ LVCADTFRAGAF+QLK NA K K PF+G E+DPV+IA EGV F
Sbjct: 121 KFAYHYMRKGWRVGLVCADTFRAGAFEQLKMNAAKIKCPFFGHKKETDPVKIAQEGVNFF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K++ ++IIVDTSGRHKQEAALFEEM+QV A +PD IFVMDSSIGQA +DQA AF ++
Sbjct: 181 KEQKFEIIIVDTSGRHKQEAALFEEMQQVQAAVSPDTSIFVMDSSIGQACYDQATAFNKA 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ VG+VI+TK+DGHAKGGGALSAV+AT+SPV+FIGTGEH D+ E F+ F+ RLLG+GD
Sbjct: 241 IRVGSVIITKLDGHAKGGGALSAVSATQSPVVFIGTGEHFDDLESFNASSFIKRLLGLGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
G + + + +P D+Q ++++ + +G F+LR M +QF ++L MGP+ QV SM+PG SS
Sbjct: 301 IGGLVQTVKDAIPEDKQKKMVENIQKGEFSLRDMRDQFASVLNMGPLNQVVSMIPGLSSN 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
L+PKGREKES A+IKR++ +MDSMT+EELD P M+D RI+RIA+GSG + EV +L
Sbjct: 361 LIPKGREKESTARIKRFLCIMDSMTDEELDCIKP--MSDFRILRIAKGSGCRPEEVAFLL 418
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQNLM 477
EE+K+ AK+ + +K+ + ++ L+RN Q MSK + +L+Q+GG+G L N+M
Sbjct: 419 EEHKKFAKMVEQFGKMKLNNQTDLKNLNRNPKQLMQQMSKAIDPKLLQQMGGMGNLMNMM 478
Query: 478 KQMGSTKDM 486
K+MG+ + M
Sbjct: 479 KEMGNMEGM 487
>gi|386697217|gb|AFJ22069.1| signal recognition particle protein 54k, partial [Cosmoglyphus sp.
AD702]
Length = 444
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 262/444 (59%), Positives = 339/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM + E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M + I
Sbjct: 419 --LTKNVNPAQMAK-LNQQMARMI 439
>gi|386697263|gb|AFJ22092.1| signal recognition particle protein 54k, partial [Kramerella sp.
AD967]
Length = 444
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/443 (58%), Positives = 337/443 (76%), Gaps = 7/443 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + ++ EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMS 444
LDS KL + +RI+R++RGSG REV E+L +Y + A + KM G+K KG
Sbjct: 360 LDSREGAKLFSKQPTRIIRVSRGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKG--G 417
Query: 445 ALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M K I
Sbjct: 418 DLTKNVNPAQMAK-LNQQMAKMI 439
>gi|386697199|gb|AFJ22060.1| signal recognition particle protein 54k, partial [Glycyphagus
hypudaei complex sp. PBK-2011]
Length = 444
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/444 (58%), Positives = 340/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N++ +++ +++AAG NKRR+I A++ EL K+L
Sbjct: 1 LDTLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGLNKRRMIMTAVYQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK ++IMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVQAYQPVKGKANIIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIATEGVDKFTKENFEIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S AT P L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAATQPHLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDGE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ RG+G REV E+L +Y + A + KM G+K + K GE
Sbjct: 360 LDSREGAKLFSKQPTRIVRVGRGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKPGE- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
++N+N M+K L Q M K I
Sbjct: 419 --FTKNVNPAQMAK-LNQQMAKMI 439
>gi|301120250|ref|XP_002907852.1| signal recognition particle, putative [Phytophthora infestans
T30-4]
gi|262102883|gb|EEY60935.1| signal recognition particle, putative [Phytophthora infestans
T30-4]
Length = 511
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/489 (53%), Positives = 367/489 (75%), Gaps = 11/489 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG + A+ +++ T++D++V N L EI ALL++DVQ KLVR+++ N+K V
Sbjct: 1 MVLAELGSKLQGALAKLNRTTVVDDEVFNALLKEICGALLESDVQVKLVRQLRDNVKLAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+D ++G N+RR+IQ+++ +++ +ML+P + KKG+ +VIMFVGLQGSGKTT+ K
Sbjct: 61 NLEDASSGVNRRRLIQKSVVDQIVQMLEPEAQPYKMKKGQSNVIMFVGLQGSGKTTSIAK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A+++Q+KGWK +VCADTFRAGAFDQLKQN+TK +IPFYGSYTE+DPVRIA EGV F+
Sbjct: 121 FAHFYQRKGWKTCMVCADTFRAGAFDQLKQNSTKLRIPFYGSYTEADPVRIAEEGVAQFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN +LI+VDTSGRHKQE LF EMR+VS A PD V+FVMDS+IGQA FDQA AF+++V
Sbjct: 181 AENYELILVDTSGRHKQETDLFAEMREVSAAVQPDDVVFVMDSTIGQAVFDQASAFRETV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT SP+IF GTGEH +FE F+ + FVSRL+GMGD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVAATGSPIIFYGTGEHFADFESFNAQSFVSRLMGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS--- 357
G M+++ +D Q E+++K +G FTLR MY+QFQ+++KMGP+ +V SM+PG
Sbjct: 301 RGLMEEVKTSGMLDNQEEMVEKFQKGVFTLRDMYKQFQSVMKMGPLSKVMSMIPGLPQGM 360
Query: 358 SELMP-KGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 416
SE+M G E+E+ +++R++ MMDSMT+ ELD + P +++SR R+ARGSG Q+ EV
Sbjct: 361 SEMMNMGGGEEEASKRLRRFLFMMDSMTDAELDGAVP--LSESRQTRVARGSGCQLYEVE 418
Query: 417 EMLEEYKRLAKIWSKMKGLKIPKKGEMS---ALSRNMNA--QHMSKVLPQGMLKQIGGVG 471
+L+ +K+ A + S+M + K G+ + ++RN NA Q +SKV+ M+ Q+GG
Sbjct: 419 FLLKCHKQFATVVSRMGKSGLMKTGDAALGKQMARNPNAVMQQLSKVMDPKMMAQMGGPQ 478
Query: 472 GLQNLMKQM 480
+ +MKQM
Sbjct: 479 NMMRMMKQM 487
>gi|386697125|gb|AFJ22023.1| signal recognition particle protein 54k, partial [Histiostomatidae
gen. sp. AD357]
Length = 444
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/444 (59%), Positives = 338/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIATEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P +++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPQQIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDAE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M K I
Sbjct: 419 --LTKNVNPAQMAK-LNQQMAKMI 439
>gi|386697227|gb|AFJ22074.1| signal recognition particle protein 54k, partial [Capillaroglyphus
polypori]
Length = 444
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/444 (59%), Positives = 339/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGIKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYLRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAIQPQLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDAE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M K I
Sbjct: 419 --LTKNVNPAQMAK-LNQQMAKMI 439
>gi|386697229|gb|AFJ22075.1| signal recognition particle protein 54k, partial [Boletoglyphus
extremiorientalis]
gi|386697231|gb|AFJ22076.1| signal recognition particle protein 54k, partial [Boletoglyphus
ornatus]
Length = 444
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/444 (59%), Positives = 339/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIILVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGIKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYHYLRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIAAEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAIQPQLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDAE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M K I
Sbjct: 419 --LTKNVNPAQMAK-LNQQMAKMI 439
>gi|386697161|gb|AFJ22041.1| signal recognition particle protein 54k, partial [Fusohericia sp.
AD660]
Length = 445
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 265/445 (59%), Positives = 340/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N+K +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICKALIESDVNILLVKKLRENVKSVIDFDEMAAGLNKRRMIMTAVFQELVKLL 60
Query: 88 DPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFD 146
D K F P +GKP+VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFD
Sbjct: 61 DSDVKEPFQPVRGKPNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFD 120
Query: 147 QLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMR 206
QLKQNATKA+IPFYGSYTESDPV IA EGVE F EN D+IIVDTSGRHKQE++LFEEM
Sbjct: 121 QLKQNATKARIPFYGSYTESDPVVIAHEGVEKFTNENFDIIIVDTSGRHKQESSLFEEML 180
Query: 207 QVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 266
+S A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 AISSAIQPNLVVYVMDASIGQACESQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 240
Query: 267 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 326
KSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + ++ EL++KL G
Sbjct: 241 KSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKHG 299
Query: 327 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 386
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 300 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDP 359
Query: 387 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 442
ELDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 ELDSREGAKLFSKQATRIVRVARGAGVTQREVQELLSQYTKFATVVKKMGGIKGLFKSGD 419
Query: 443 MSALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M K I
Sbjct: 420 ---LAKNVNPNQMAK-LNQHMAKMI 440
>gi|386697219|gb|AFJ22070.1| signal recognition particle protein 54k, partial [Sancassania
nesbitti]
Length = 433
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 256/435 (58%), Positives = 335/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P +++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPQQIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R++RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVSRGAGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKTGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 419 --LAKNVNPSQMAKL 431
>gi|386697235|gb|AFJ22078.1| signal recognition particle protein 54k, partial [Naiadacarus
arboricola]
Length = 433
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 258/435 (59%), Positives = 335/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFEEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+I+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIIYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIIRVGRGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 419 --LTKNVNPAQMAKL 431
>gi|386697193|gb|AFJ22057.1| signal recognition particle protein 54k, partial [Oryzomyopus sp.
AD729]
Length = 444
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/444 (59%), Positives = 339/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICSALIESDVNIILVKQLRENVRSVIDFEEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG S+ P KGK ++IMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKSWQPVKGKTNIIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFINENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM + E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+RI+RGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIIRISRGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M + I
Sbjct: 419 --LTKNVNPAQMAK-LNQQMARMI 439
>gi|386697107|gb|AFJ22014.1| signal recognition particle protein 54k, partial [Bonomoia sp.
AD653]
Length = 444
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/435 (59%), Positives = 336/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL++ADV LV++++ N+K +++ D++AAG NKRR+I A+F ELCK+L
Sbjct: 1 LDNMLKEICAALIEADVNILLVKKLRENVKNVIDFDEMAAGLNKRRMIMMAVFKELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG +TP KG+ +V+MFVGLQG GKTTT TK AYY+QK+G K ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKQWTPVKGRTNVVMFVGLQGIGKTTTVTKMAYYYQKRGLKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IP+YGSYTESDPV IA EGV FK++ DL+IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPYYGSYTESDPVIIAAEGVRIFKEKGFDLVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ ATNPDLVI+VMD+SIGQA QA+AFK V +GA+IVTK+DGHA+GGGALSAVAATK
Sbjct: 181 IQAATNPDLVIYVMDASIGQACEAQAKAFKSKVDIGAIIVTKLDGHARGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G ++K++E + +D+ EL+ KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFRVKPFISKLLGMGDIEGLIEKVNE-LKLDENEELINKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ SM+PGF EL + ES A++KR +T+MDSM++ E
Sbjct: 300 FTLRDMYEQLSNIMKMGPFNQILSMIPGFGPELTRNTSDAESAARLKRMLTIMDSMSDSE 359
Query: 388 LDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL N +RI R+A G+G REV E+L +Y + A++ KM G+K + K+G+
Sbjct: 360 LDSREGAKLFNRQPNRITRVAAGAGVWRREVQELLSQYGKFAQMVKKMGGMKGLFKQGD- 418
Query: 444 SALSRNMNAQHMSKV 458
+S+N+N M+K+
Sbjct: 419 --ISKNINPMQMAKL 431
>gi|386697223|gb|AFJ22072.1| signal recognition particle protein 54k, partial [Acotyledon
paradoxa]
Length = 433
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 257/435 (59%), Positives = 334/435 (76%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P +++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPQQIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEAFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDPE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R++RGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 419 --LTKNVNPNQMAKL 431
>gi|118370390|ref|XP_001018396.1| signal recognition particle 54 kDa protein 1, SRP54 [Tetrahymena
thermophila]
gi|89300163|gb|EAR98151.1| signal recognition particle 54 kDa protein 1, SRP54 [Tetrahymena
thermophila SB210]
Length = 518
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/498 (52%), Positives = 363/498 (72%), Gaps = 9/498 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+QQ++ A +IDE++LN+ L EI ALLQ+DV K V ++++NI
Sbjct: 1 MVLADLGKRINNALQQLNKAPVIDEELLNQVLKEIQLALLQSDVNVKYVAKLKSNIIMKF 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++D + G N +++IQQA+ EL +MLD K F PK+GKP+V+MFVGLQG+GKTTTCTK
Sbjct: 61 KMED-SQGVNLKKMIQQAVVQELTQMLDSNKKPFVPKRGKPNVVMFVGLQGAGKTTTCTK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAY+ QKKGW+ AL+CADTFRAGAFDQLKQNATK ++PFYGSY+E+DPV IA EGV+ FK
Sbjct: 120 YAYHWQKKGWRTALICADTFRAGAFDQLKQNATKVRVPFYGSYSETDPVAIAEEGVKHFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN ++IIVDTSGRHKQE+ LF+EM+QV A NPD IFVMD SIGQA +DQAQAF+ +V
Sbjct: 180 KENYEMIIVDTSGRHKQESELFDEMKQVQAAVNPDECIFVMDGSIGQACYDQAQAFRNAV 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH ++ E F+ + FV RLLG+GD
Sbjct: 240 NVGSVIITKLDGHAKGGGALSAVAATESPIIFIGTGEHFEDLEPFNPESFVKRLLGLGDI 299
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G + + E V M+ Q + + +++G F++R Q+++ILK+G I Q SM+PG + +
Sbjct: 300 KGMITTVTEAVDMETQGKAIANITKGQFSIRDFQAQYKSILKLGSINQFMSMIPGMGNSI 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ K EKES K+K+++T+MDSM + ELD +N SRI+RIARGSG + +V ++L+
Sbjct: 360 LDKNNEKESIRKVKKFLTIMDSMNDNELDGVVA--INPSRIVRIARGSGSSLEDVNQLLD 417
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMN--AQHMSKVLPQGMLKQIGGVGGLQNLMK 478
EYK+++K++ + + + RN N M L M++ +GG+G + N++K
Sbjct: 418 EYKKISKVFIGLGKGLGKGGDIGNIM-RNPNQIKNQMGAALDPKMIQGMGGMGNIMNMVK 476
Query: 479 QMGSTK---DMMGMFGGG 493
+M + D+M GGG
Sbjct: 477 EMSKMEGVGDLMKGLGGG 494
>gi|386697123|gb|AFJ22022.1| signal recognition particle protein 54k, partial [Histiostoma
inquilinum]
Length = 432
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/435 (59%), Positives = 336/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI ALL+ADV LV++++ N++ +++ D++AAG NKRR+I A+F ELCK+L
Sbjct: 1 LDNMLKEICAALLEADVNILLVKKLRENVRNVIDFDEMAAGLNKRRMIMMAVFQELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KG+ +V+MFVGLQG GKTTT TK AY++ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKMAYHYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTSGRHKQE +LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVIIAADGVSKFAKENFEIVIVDTSGRHKQENSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ AT+PDLV++VMD+SIGQA QA+AFK V +GA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAATSPDLVVYVMDASIGQACEAQAKAFKSKVDIGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + ++ EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF EL E ES A++KR MT+MDSM++ E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGPELSKCTSEAESAARLKRMMTIMDSMSDNE 359
Query: 388 LDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL N +RI+R+ARG+G REV E+L +Y + A++ KM G+K + K+G+
Sbjct: 360 LDSREGAKLFNRQPNRIVRVARGAGVFRREVQELLSQYTKFAQMVKKMGGMKGLFKQGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 419 --LAKNVNPMQMAKL 431
>gi|386697197|gb|AFJ22059.1| signal recognition particle protein 54k, partial [Marsupialichus
brasiliensis]
Length = 433
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 256/435 (58%), Positives = 336/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N++ +++ +++AAG NKRR+I A++ EL K+L
Sbjct: 1 LDTLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGLNKRRMIMTAVYQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK ++IMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVQAWQPVKGKANIIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIATEGVEKFINENFEIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S AT P L+++VMD+SIGQA +QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAATQPHLIVYVMDASIGQACENQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ RG+G REV E+L +Y + A + KM G+K + K GE
Sbjct: 360 LDSREGAKLFSKQPTRIIRVGRGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKPGE- 418
Query: 444 SALSRNMNAQHMSKV 458
++N+N M+K+
Sbjct: 419 --FTKNVNPAQMAKL 431
>gi|449018117|dbj|BAM81519.1| signal recognition particle recognition component SRP54
[Cyanidioschyzon merolae strain 10D]
Length = 502
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 259/496 (52%), Positives = 357/496 (71%), Gaps = 13/496 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I +A+Q ++N ++DE L L E+ RALL+ADV K V E++ +K V
Sbjct: 1 MVLETLGTKIVKALQSLTNQVVVDETALEAALKEVARALLEADVNVKQVSELRQRVKNRV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L +L G N+RR+I + +F ELC+MLDPG P + P++G+ +VIMFVGLQG+GKTT+C K
Sbjct: 61 RLAELPPGTNRRRLIHKTVFEELCRMLDPGIPPYRPQRGQSNVIMFVGLQGNGKTTSCVK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++++KG++ LVCADTFRAGAFDQL+QNAT+A++PFYG Y E+D V++A EGVE F+
Sbjct: 121 VAYFYKRKGYRTGLVCADTFRAGAFDQLRQNATRARVPFYGRYGETDAVKVASEGVERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++I+VDTSGRHKQEAALF EM Q+ A PD VIFVMD SIGQAA+DQA+AF+Q V
Sbjct: 181 REGFEVILVDTSGRHKQEAALFAEMEQLDRALTPDHVIFVMDGSIGQAAYDQARAFQQRV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TKMDGHA+GGGALSAVAAT SP++F+GTGEH+D+ E F V+ FV RLLGMGD
Sbjct: 241 RVGSVILTKMDGHARGGGALSAVAATHSPIVFLGTGEHLDDLEEFQVQSFVGRLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G + I E + E + ++S+G TLR M Q+ N+L++GP+ +V SM+PG +E+
Sbjct: 301 RGLVSTIAEADLENPDEEQMNRISQGILTLRDMQMQYSNVLRLGPLSKVASMMPGM-AEI 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+PKG EK++Q +++ + ++DSM EELD S +DSR RIARGSGR V+EV E+L
Sbjct: 360 LPKGSEKDAQTRVRNMLVILDSMNREELDESTSVRWDDSRKRRIARGSGRSVQEVDEVLT 419
Query: 421 EYKRLAKIWSK----MKGLKIPKKGEMSALSR-----NMNA--QHMSKVLPQGMLKQIG- 468
+YK ++K WS+ MK L P G + + N+ A Q M +++ ML+Q+G
Sbjct: 420 QYKLISKAWSRIGKNMKHLMQPGHGGVGHGTGPNSIPNIGAMEQQMQRMMDPRMLQQLGS 479
Query: 469 GVGGLQNLMKQMGSTK 484
G GGLQ +M+Q+ S +
Sbjct: 480 GPGGLQRVMQQLMSGR 495
>gi|386697313|gb|AFJ22117.1| signal recognition particle protein 54k, partial [Plutarchusia
chelopus]
gi|386697315|gb|AFJ22118.1| signal recognition particle protein 54k, partial [Syringobiidae
gen. sp. AD850]
Length = 444
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 258/444 (58%), Positives = 340/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F L K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFRNLVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG P++ P KGKP+++MFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVPAWQPIKGKPNIVMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNA KA+IPFYGSYTESDPV IA EGVE FK+E ++IIVDTSGRHKQE +LFEEM
Sbjct: 121 LKQNAHKARIPFYGSYTESDPVVIASEGVEKFKEEGFEIIIVDTSGRHKQENSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACESQAKAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +D+++E + ++ EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDRVNE-LKLEDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR +T+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMLTIMDSMSDSE 359
Query: 388 LDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQQTRIVRVARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M K I
Sbjct: 419 --LAKNVNPAQMAK-LNQQMAKMI 439
>gi|386697133|gb|AFJ22027.1| signal recognition particle protein 54k, partial [Tortonia sp.
AD560]
Length = 432
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 255/435 (58%), Positives = 335/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYLRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGV+ F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVDKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACEGQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R++RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 419 --LAKNVNPAQMAKL 431
>gi|386697225|gb|AFJ22073.1| signal recognition particle protein 54k, partial [Aleuroglyphus
ovatus]
Length = 433
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 257/435 (59%), Positives = 334/435 (76%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIILVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P +++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPHQIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM + E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARG+G REV E+L +Y + A++ KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAQVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 419 --LAKNVNPAQMAKL 431
>gi|386697291|gb|AFJ22106.1| signal recognition particle protein 54k, partial [Geranolichus
canadensis]
Length = 444
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 259/444 (58%), Positives = 339/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICMALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPDVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E+ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEEESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +R++R+ARGSG REV E+L +Y + A + KM G+K + + G+
Sbjct: 360 LDSREGAKLFSKQPTRLVRVARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFRSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M K I
Sbjct: 419 --LAKNVNPAQMAK-LNQQMAKMI 439
>gi|354498655|ref|XP_003511430.1| PREDICTED: signal recognition particle 54 kDa protein, partial
[Cricetulus griseus]
Length = 385
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 246/386 (63%), Positives = 314/386 (81%), Gaps = 1/386 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNE 386
M KG E+ES A++K+ MT+MDSM ++
Sbjct: 360 MSKGNEQESMARLKKLMTIMDSMNDQ 385
>gi|386697685|gb|AFJ22303.1| signal recognition particle protein 54k, partial [Trichoecius
tenax]
Length = 433
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 257/435 (59%), Positives = 332/435 (76%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV KLV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFNEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQENTLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATN 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R++RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L +N+N M+K+
Sbjct: 419 --LMKNVNPTQMAKL 431
>gi|386697239|gb|AFJ22080.1| signal recognition particle protein 54k, partial [Askinasia
antillarum]
Length = 446
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/446 (59%), Positives = 339/446 (76%), Gaps = 11/446 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNILLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKG--KPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAF 145
DPG ++ P K K +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAF
Sbjct: 61 DPGVKAWQPVKANFKTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAF 120
Query: 146 DQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEM 205
DQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 DQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEM 180
Query: 206 RQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAA 265
+S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAA
Sbjct: 181 LAISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAA 240
Query: 266 TKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSE 325
TKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL
Sbjct: 241 TKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKH 299
Query: 326 GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTN 385
G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 300 GEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSD 359
Query: 386 EELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKG 441
ELDS KL + +RI+RIARGSG REV E+L +Y + A + KM G+K + K G
Sbjct: 360 AELDSREGAKLFSKQPTRIVRIARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSG 419
Query: 442 EMSALSRNMNAQHMSKVLPQGMLKQI 467
+ L++N+N M+K L Q M + I
Sbjct: 420 D---LTKNVNPAQMAK-LNQQMARMI 441
>gi|348677486|gb|EGZ17303.1| hypothetical protein PHYSODRAFT_360478 [Phytophthora sojae]
Length = 511
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/489 (53%), Positives = 367/489 (75%), Gaps = 11/489 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG + A+ +++ T++D++V + L EI ALL++DVQ KLVR+++ N+K V
Sbjct: 1 MVLAELGSKLQGALAKLNRTTVVDDEVFSALLKEICGALLESDVQVKLVRQLRDNVKLAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+D ++G N+RR+IQ+++ ++L +ML+P + KKG+ +VIMFVGLQGSGKTT+ K
Sbjct: 61 SLEDASSGVNRRRLIQKSVVDQLVQMLEPEAQPYKMKKGQSNVIMFVGLQGSGKTTSIAK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A+++Q+KGWK +VCADTFRAGAFDQLKQN+TK +IPFYGSYTE+DPVRIA EGV F+
Sbjct: 121 FAHHYQRKGWKTCMVCADTFRAGAFDQLKQNSTKLRIPFYGSYTEADPVRIAEEGVAQFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN +LI+VDTSGRHKQEA LF EMR+VS A PD V+FVMDS+IGQA FDQA AF+++V
Sbjct: 181 AENYELILVDTSGRHKQEADLFAEMREVSAAVQPDDVVFVMDSTIGQAVFDQASAFRETV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT SP+IF GTGEH +FE F+ + FVSRL+GMGD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVAATGSPIIFYGTGEHFADFESFNAQSFVSRLMGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS--- 357
G M+++ +D Q E+++K +G FTLR MY+QFQ+++KMGP+ +V SM+PG
Sbjct: 301 RGLMEEVKTSGMLDNQEEMVEKFQKGVFTLRDMYKQFQSVMKMGPLSKVMSMIPGLPQGM 360
Query: 358 SELMP-KGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 416
SE+M G E+E+ +++R++ MMDSMT+ ELD P +++SR R+ARGSG Q+ EV
Sbjct: 361 SEMMNMGGGEEEASKRLRRFLFMMDSMTDAELDGIVP--LSESRQTRVARGSGCQLYEVE 418
Query: 417 EMLEEYKRLAKIWSKMKGLKIPKKGEMS---ALSRNMNA--QHMSKVLPQGMLKQIGGVG 471
+L+ +K+ A + S+M + K G+ + ++RN NA Q +SKV+ M+ Q+GG
Sbjct: 419 FLLKCHKQFATVVSRMGKSGLMKTGDAALGKQMARNPNAVMQQLSKVMDPKMMAQMGGPQ 478
Query: 472 GLQNLMKQM 480
+ +MKQM
Sbjct: 479 NMMRMMKQM 487
>gi|386697299|gb|AFJ22110.1| signal recognition particle protein 54k, partial [Kakapolichus sp.
n. AD881]
Length = 444
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 259/444 (58%), Positives = 338/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICKALIESDVNITLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPDVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACESQARAFKDKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +R++R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRMIRVARGSGVTGREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M K I
Sbjct: 419 --LAKNVNPAQMAK-LNQQMAKMI 439
>gi|145503400|ref|XP_001437676.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404829|emb|CAK70279.1| unnamed protein product [Paramecium tetraurelia]
Length = 507
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 261/488 (53%), Positives = 357/488 (73%), Gaps = 13/488 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA+LG SI+ A+Q++S A ++DE ++++ L EI ALL+ADV K +++++ ++K
Sbjct: 1 MVLAELGKSINAALQKLSKAPVVDEALVDQILGEIAMALLKADVNAKFIKKLREDVKMEF 60
Query: 58 KIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTT 117
K+ +++ N +++IQ+A+ + L +ML+ + F PKKGK +VIMFVGLQGSGKTTT
Sbjct: 61 KLCEEENI----NHQKLIQKAVVDGLTRMLESDRKPFQPKKGKQNVIMFVGLQGSGKTTT 116
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTKYAYY+QKKGWK ALVCADTFRAGAFDQLKQNATK ++PFYGSYTE+DPV+IA EGV
Sbjct: 117 CTKYAYYYQKKGWKVALVCADTFRAGAFDQLKQNATKVRVPFYGSYTEADPVQIAQEGVN 176
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
FKKE ++IIVDTSGRHKQE LFEEM+QV A PD ++FVMDSSIGQA FDQA AFK
Sbjct: 177 VFKKEAFEIIIVDTSGRHKQENDLFEEMKQVEAAVKPDDIVFVMDSSIGQACFDQALAFK 236
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
++V+VG+VI+TK+DGHAKGGGALSAVAAT+SP++FIG GEH D+ E F+ FV RLLG+
Sbjct: 237 KAVNVGSVIITKLDGHAKGGGALSAVAATESPIVFIGEGEHFDDLESFEASSFVRRLLGL 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
GD + + +VV M QP+L+QKL EG F++R + QF ++LK+G + Q S +PG
Sbjct: 297 GDINKLFQSVKDVVNMRDQPQLIQKLKEGKFSIRDLQTQFNSVLKLGSLNQFMSAIPGMG 356
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
S ++ KG EKES +I+R++ +M+SMT +ELD +N RI+RIA+GSG + EV
Sbjct: 357 SSVLSKGNEKESIKRIQRFLCIMNSMTADELDGEGN--LNFCRIVRIAKGSGTSIEEVHI 414
Query: 418 MLEEYKRLAKIWSKMKGLKIPKK--GEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGL 473
+L+E+K+L+K+ + + K E L RN Q M + ML+++GG+ +
Sbjct: 415 LLDEHKKLSKVVGNLAKTNLGGKRGNEFEQLKRNPQQMMQKMKGAIDPSMLQKLGGMDNV 474
Query: 474 QNLMKQMG 481
N+MKQMG
Sbjct: 475 MNMMKQMG 482
>gi|386697267|gb|AFJ22094.1| signal recognition particle protein 54k, partial [Freyana anatina]
Length = 433
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/435 (58%), Positives = 335/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPAKGKTNIIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATN 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LKLDDNGELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++K+ MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKQMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 419 --LAKNVNPAQMAKL 431
>gi|410898716|ref|XP_003962843.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
2 [Takifugu rubripes]
Length = 455
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/443 (58%), Positives = 342/443 (77%), Gaps = 17/443 (3%)
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+
Sbjct: 11 IDLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCS 70
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ F
Sbjct: 71 KLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIATEGVDKF 130
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK
Sbjct: 131 KMENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACESQAKAFKDK 190
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 191 VDVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 250
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
G +D++++ + +D EL+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGF ++
Sbjct: 251 IEGLIDRVND-LKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTD 309
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 416
M KG E+ES A++K+ MT+MDSM ++ELDS + KL + +RI R+ARGSG R+V
Sbjct: 310 FMSKGNEQESMARLKKLMTIMDSMNDQELDSKDGAKLFSKQPNRIQRVARGSGVATRDVQ 369
Query: 417 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 468
E+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +G
Sbjct: 370 ELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLHHMG 426
Query: 469 GVGGLQNLMKQM--GSTKDMMGM 489
G+ GLQ++M+Q G+ +M GM
Sbjct: 427 GMAGLQSMMRQFQQGAAGNMKGM 449
>gi|386697391|gb|AFJ22156.1| signal recognition particle protein 54k, partial [Strelkoviacarus
quadratus]
Length = 444
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/444 (59%), Positives = 338/444 (76%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNLLKEICTALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMILTAVFKELYKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
D G + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGW+ ALVCADTFRAGAFDQ
Sbjct: 61 DSGAKLWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWRCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQSAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP++FIGTGEH+D FE F VKPF+S+LLGMGD G +DK++E + ++ +LL+KL G+
Sbjct: 241 SPILFIGTGEHIDAFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDTEDLLEKLRHGD 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES A++KR MT+MDS+++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMARLKRMMTIMDSLSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + SR++R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPSRLVRVARGAGVPQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
LS+N+N M+K L Q M K I
Sbjct: 419 --LSKNVNPTQMAK-LNQQMAKMI 439
>gi|417410790|gb|JAA51861.1| Putative signal recognition particle subunit srp54, partial
[Desmodus rotundus]
Length = 448
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/445 (58%), Positives = 344/445 (77%), Gaps = 11/445 (2%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 1 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 60
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 61 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 120
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
E FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AF
Sbjct: 121 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 180
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLG
Sbjct: 181 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 240
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
MGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF
Sbjct: 241 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGF 299
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVR 413
++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R
Sbjct: 300 GTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTR 359
Query: 414 EVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIG 468
+V E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +G
Sbjct: 360 DVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMG 419
Query: 469 GVGGLQNLMKQM--GSTKDMMGMFG 491
G+ GLQ++M+Q G+ +M GM G
Sbjct: 420 GMAGLQSMMRQFQQGAAGNMKGMMG 444
>gi|386697195|gb|AFJ22058.1| signal recognition particle protein 54k, partial [Marmosopus sp.
AD727]
Length = 433
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/435 (58%), Positives = 335/435 (77%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICSALIESDVNIILVKQLRENVRSVIDFEEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AFK V VGA+I+TK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIITKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM + E
Sbjct: 300 FTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADLE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R++RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLTQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 419 --LTKNVNPAQMAKL 431
>gi|291403730|ref|XP_002718184.1| PREDICTED: signal recognition particle 54kDa isoform 2 [Oryctolagus
cuniculus]
Length = 455
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 259/447 (57%), Positives = 341/447 (76%), Gaps = 15/447 (3%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 8 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 67
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 68 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 127
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
E FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AF
Sbjct: 128 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 187
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLG
Sbjct: 188 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 247
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
MGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF
Sbjct: 248 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGF 306
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVR 413
++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R
Sbjct: 307 GTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTR 366
Query: 414 EVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQ 466
+V E+L +Y + A++ KM G+K KG+ +S N+N Q M+K++ +L
Sbjct: 367 DVQELLTQYTKFAQMVKKMGGIKGLFKGK--KISENVNQSPDAKLNQQMAKMMDPRVLHH 424
Query: 467 IGGVGGLQNLMKQM--GSTKDMMGMFG 491
+GG+ GLQ++M+Q G+ +M GM G
Sbjct: 425 MGGMAGLQSMMRQFQQGAAGNMKGMMG 451
>gi|296214803|ref|XP_002753861.1| PREDICTED: signal recognition particle 54 kDa protein isoform 3
[Callithrix jacchus]
gi|345306152|ref|XP_003428427.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
2 [Ornithorhynchus anatinus]
Length = 455
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/445 (58%), Positives = 344/445 (77%), Gaps = 11/445 (2%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 8 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 67
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 68 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 127
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
E FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AF
Sbjct: 128 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 187
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLG
Sbjct: 188 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 247
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
MGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF
Sbjct: 248 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGF 306
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVR 413
++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R
Sbjct: 307 GTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTR 366
Query: 414 EVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIG 468
+V E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +G
Sbjct: 367 DVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMG 426
Query: 469 GVGGLQNLMKQM--GSTKDMMGMFG 491
G+ GLQ++M+Q G+ +M GM G
Sbjct: 427 GMAGLQSMMRQFQQGAAGNMKGMMG 451
>gi|344274152|ref|XP_003408882.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
2 [Loxodonta africana]
Length = 455
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/445 (58%), Positives = 344/445 (77%), Gaps = 11/445 (2%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 8 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 67
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 68 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 127
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
E FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AF
Sbjct: 128 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 187
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLG
Sbjct: 188 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 247
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
MGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF
Sbjct: 248 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGF 306
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVR 413
++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R
Sbjct: 307 GTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTR 366
Query: 414 EVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIG 468
+V E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +G
Sbjct: 367 DVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMG 426
Query: 469 GVGGLQNLMKQM--GSTKDMMGMFG 491
G+ GLQ++M+Q G+ +M GM G
Sbjct: 427 GMAGLQSMMRQFQQGAAGNMKGMMG 451
>gi|386697159|gb|AFJ22040.1| signal recognition particle protein 54k, partial [Carpoglyphus
lactis]
Length = 434
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 259/436 (59%), Positives = 335/436 (76%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L +I +AL+++DV LV++++ N+K +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDGLLKDICKALIESDVNIMLVKKLRENVKSVIDFDEMAAGLNKRRMIMTAVFQELVKLL 60
Query: 88 DPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFD 146
D K F P KGKP+VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFD
Sbjct: 61 DSDVKEPFQPVKGKPNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFD 120
Query: 147 QLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMR 206
QLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIVDTSGRHKQE++LFEEM
Sbjct: 121 QLKQNATKARIPFYGSYTESDPVVIAHEGVEKFVNENFEIIIVDTSGRHKQESSLFEEML 180
Query: 207 QVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 266
+S A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 AISSAIQPNLVVYVMDASIGQACESQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 240
Query: 267 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 326
KSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK+ E + ++ EL++KL G
Sbjct: 241 KSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVSE-LKLEDNEELIEKLKHG 299
Query: 327 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 386
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 300 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDS 359
Query: 387 ELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 442
ELDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 ELDSREGAKLFSKQTTRIVRVARGAGVTQREVQELLAQYTKFATVVKKMGGIKGLFKSGD 419
Query: 443 MSALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 420 ---LTKNVNPNQMAKL 432
>gi|226371618|ref|NP_001139754.1| signal recognition particle 54 kDa protein isoform 2 [Homo sapiens]
gi|332229143|ref|XP_003263751.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Nomascus leucogenys]
gi|335292473|ref|XP_003356739.1| PREDICTED: signal recognition particle 54 kDa protein [Sus scrofa]
gi|338717903|ref|XP_003363720.1| PREDICTED: signal recognition particle 54 kDa protein [Equus
caballus]
gi|397501117|ref|XP_003821241.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Pan paniscus]
gi|402875939|ref|XP_003901748.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Papio anubis]
gi|410048163|ref|XP_003952520.1| PREDICTED: signal recognition particle 54 kDa protein [Pan
troglodytes]
gi|194374727|dbj|BAG62478.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/445 (58%), Positives = 344/445 (77%), Gaps = 11/445 (2%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 8 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 67
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 68 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 127
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
E FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AF
Sbjct: 128 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 187
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLG
Sbjct: 188 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 247
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
MGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF
Sbjct: 248 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGF 306
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVR 413
++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R
Sbjct: 307 GTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTR 366
Query: 414 EVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIG 468
+V E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +G
Sbjct: 367 DVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMG 426
Query: 469 GVGGLQNLMKQM--GSTKDMMGMFG 491
G+ GLQ++M+Q G+ +M GM G
Sbjct: 427 GMAGLQSMMRQFQQGAAGNMKGMMG 451
>gi|386697189|gb|AFJ22055.1| signal recognition particle protein 54k, partial [Aeroglyphus
robustus]
Length = 444
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 259/444 (58%), Positives = 336/444 (75%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFEEMAAGLNKRRMIMMAVFTELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGW+ ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKPWQPVKGKVNVIMFVGLQGIGKTTTCTKMAYYYMRKGWRCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+LV++VMD+SIGQA QA+AFK V VGA+I+TK+D HAKGGGALSAVAATK
Sbjct: 181 ISAAIQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIITKLDSHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PG +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGIGAELSKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R++RGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M K I
Sbjct: 419 --LTKNVNPAQMAK-LNQQMAKMI 439
>gi|410962047|ref|XP_003987588.1| PREDICTED: signal recognition particle 54 kDa protein isoform 3
[Felis catus]
Length = 455
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/445 (58%), Positives = 344/445 (77%), Gaps = 11/445 (2%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 8 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 67
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 68 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 127
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
+ FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AF
Sbjct: 128 DKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 187
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLG
Sbjct: 188 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 247
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
MGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF
Sbjct: 248 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGF 306
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVR 413
++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R
Sbjct: 307 GTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTR 366
Query: 414 EVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIG 468
+V E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +G
Sbjct: 367 DVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMG 426
Query: 469 GVGGLQNLMKQM--GSTKDMMGMFG 491
G+ GLQ++M+Q G+ +M GM G
Sbjct: 427 GMAGLQSMMRQFQQGAAGNMKGMMG 451
>gi|145514351|ref|XP_001443086.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410447|emb|CAK75689.1| unnamed protein product [Paramecium tetraurelia]
Length = 507
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 258/488 (52%), Positives = 357/488 (73%), Gaps = 13/488 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA+LG SI+ A+Q+++ A ++DE ++++ L EI ALL+ADV K +++++ ++K
Sbjct: 1 MVLAELGKSINAALQKLNKAPVVDEALVDQILGEIAMALLKADVNAKFIKKLREDVKMEF 60
Query: 58 KIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTT 117
K+ +++ N +++IQ+A+ + L +ML+ + F PKKGK +VIMFVGLQGSGKTTT
Sbjct: 61 KLCEEENI----NHQKLIQKAVVDGLTRMLESDRKPFQPKKGKQNVIMFVGLQGSGKTTT 116
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTKYAYY+QKKGWK ALVCADTFRAGAFDQLKQNATK ++PFYGSYTE+DPV+I+ EGV
Sbjct: 117 CTKYAYYYQKKGWKVALVCADTFRAGAFDQLKQNATKVRVPFYGSYTEADPVQISQEGVN 176
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
FKKE ++IIVDTSGRHKQE LFEEM+QV A PD ++FVMDSSIGQA +DQA AFK
Sbjct: 177 VFKKEAFEIIIVDTSGRHKQENDLFEEMKQVEAAVKPDDIVFVMDSSIGQACYDQALAFK 236
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
++V+VG+VI+TK+DGHAKGGGALSAVAAT+SP++FIG GEH D+ E F+ FV RLLG+
Sbjct: 237 KAVNVGSVIITKLDGHAKGGGALSAVAATESPIVFIGEGEHFDDLESFEASSFVRRLLGL 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
GD + + +VV M QP+L+QKL EG F++R + QF ++LK+G + Q S +PG
Sbjct: 297 GDINKLFQSVKDVVNMRDQPQLIQKLKEGKFSIRDLQTQFNSVLKLGSLNQFMSAIPGMG 356
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
S ++ KG EKES +I+R++ +M+SMT +ELD +N RI+RIA+GSG + EV
Sbjct: 357 SSVLSKGNEKESIKRIQRFLCIMNSMTADELDGEGN--LNFCRIVRIAKGSGTSIEEVHI 414
Query: 418 MLEEYKRLAKIWSKMKGLKIPKK--GEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGL 473
+L+E+K+L+K+ + + K E L RN Q M + ML+++GG+ +
Sbjct: 415 LLDEHKKLSKVVGNLAKTNLGGKRGNEFEQLKRNPQQMMQKMKGAIDPSMLQKLGGMDNV 474
Query: 474 QNLMKQMG 481
N+MKQMG
Sbjct: 475 MNMMKQMG 482
>gi|386697521|gb|AFJ22221.1| signal recognition particle protein 54k, partial [Knemidokoptes sp.
AD845]
Length = 460
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 267/458 (58%), Positives = 349/458 (76%), Gaps = 7/458 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI +AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICKALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLLDPEVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E+
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDVEGLIDKVNELKL 301
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+ EL++KL G FT+R MYEQ N +KMGP+ Q+ +M+PGF +EL E ES ++
Sbjct: 302 E-ENEELIEKLKHGEFTIRDMYEQITNFMKMGPLNQILNMIPGFGAELAQCTSEAESMSR 360
Query: 373 IKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+KR MT+MDSM++ ELDS + K+ + +RI+R++RG+G R+V E+L +Y + +
Sbjct: 361 LKRMMTIMDSMSDTELDSRDGAKIFSKQPTRIIRVSRGAGVTQRDVQELLSQYTKFRAVV 420
Query: 430 SKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
KM G+K KG LS+N+N M+K L Q M K I
Sbjct: 421 KKMGGIKGLFKG--GDLSKNVNPAQMAK-LNQQMAKMI 455
>gi|386697309|gb|AFJ22115.1| signal recognition particle protein 54k, partial [Rectijanua sp. n.
AD629]
Length = 444
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/444 (58%), Positives = 336/444 (75%), Gaps = 9/444 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTT TK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKPWQPIKGKTNVIMFVGLQGIGKTTTVTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G MDK+ E + +D E ++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLMDKVSE-LKLDGNEEFIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP+ Q+ +M+PGF +EL E ES ++IK MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPLNQILNMIPGFGAELAECASEAESMSRIKHMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +R++R+ARGSG + REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRLVRVARGSGVKQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD- 418
Query: 444 SALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M+K L Q M + I
Sbjct: 419 --LAKNVNPMQMAK-LNQKMAQMI 439
>gi|363734109|ref|XP_003641340.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Gallus gallus]
Length = 455
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/454 (57%), Positives = 348/454 (76%), Gaps = 18/454 (3%)
Query: 52 MQTNIKK-IVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQ 110
+Q ++K+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK ++IMFVGLQ
Sbjct: 2 LQLSMKRSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNIIMFVGLQ 61
Query: 111 GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
GSGKTTTC+K AY++Q+KGWK L+CADT+RAGAFDQLKQNATKA+IPFYGSYTE DPV
Sbjct: 62 GSGKTTTCSKLAYFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVI 121
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAF 230
IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA
Sbjct: 122 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACE 181
Query: 231 DQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 290
QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF
Sbjct: 182 AQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPF 241
Query: 291 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVF 350
+S+LLGMGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+
Sbjct: 242 ISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQIL 300
Query: 351 SMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARG 407
M+PGF ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARG
Sbjct: 301 GMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARG 360
Query: 408 SGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVL 459
SG R+V E+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++
Sbjct: 361 SGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQLAKLNQQMAKMM 417
Query: 460 PQGMLKQIGGVGGLQNLMKQM--GSTKDMMGMFG 491
+L +GG+ GLQ++M+Q G+ +M GM G
Sbjct: 418 DPRVLHHMGGMAGLQSMMRQFQQGAAGNMKGMMG 451
>gi|386697257|gb|AFJ22089.1| signal recognition particle protein 54k, partial [Hypoderatidae
gen. sp. AD887]
Length = 463
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 266/462 (57%), Positives = 350/462 (75%), Gaps = 9/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV+ ++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALIESDVNIMLVKRLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELGRLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPF+GSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFFGSYTESDPVVIASEGVEKFSNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ + EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 303 LKLE-ENEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 361
Query: 370 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 426
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G +EV E+L +Y + A
Sbjct: 362 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVFQKEVQELLSQYTKFA 421
Query: 427 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+ KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 422 AVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|427792757|gb|JAA61830.1| Putative signal recognition particle subunit srp54, partial
[Rhipicephalus pulchellus]
Length = 474
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 264/439 (60%), Positives = 332/439 (75%), Gaps = 20/439 (4%)
Query: 67 AGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQ 126
AG NKRR+IQ A+F EL +++DPG ++ P KGK +VIMFVGLQGSGKTTTCTK AY++
Sbjct: 38 AGLNKRRMIQSAVFKELIRLVDPGVKAWQPTKGKNNVIMFVGLQGSGKTTTCTKLAYHYL 97
Query: 127 KKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDL 186
KKGWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK E ++
Sbjct: 98 KKGWKTCLVCADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVVIAQEGVEKFKNEGFEI 157
Query: 187 IIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVI 246
I+VDTSGRHKQE +LFEEM QVS AT PD +IFVMD+SIGQA QA+AFK+ V VGAVI
Sbjct: 158 IVVDTSGRHKQEDSLFEEMLQVSNATKPDNIIFVMDASIGQACESQARAFKEKVDVGAVI 217
Query: 247 VTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDK 306
VTK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F VKPF+S+LLGMGD G +DK
Sbjct: 218 VTKLDGHAKGGGALSAVAATHSPIIFIGTGEHIDDFEPFKVKPFISKLLGMGDIEGLIDK 277
Query: 307 IHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGRE 366
++E + +D EL++KL G FTLR MYEQFQNI+KMGP Q+ M+PGFSS+ M KG E
Sbjct: 278 VNE-LKLDDNEELIEKLKHGEFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSSDFMTKGNE 336
Query: 367 KESQAKIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYK 423
+ES ++K+ MT+MDSM ++ELD KL + R+ R+ARG+G REV E+L +Y
Sbjct: 337 QESMGRLKKLMTIMDSMNDQELDHREGAKLFSRQTGRVTRVARGAGVTSREVQELLAQYT 396
Query: 424 RLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGGVGGLQN 475
+ A + KM G+K + K G+M ++N+N Q M+K++ +L Q+GG GLQN
Sbjct: 397 KFAAMVKKMGGIKGLFKGGDM---AKNVNQAQMNKLNQQMAKMMDPRVLHQMGGFSGLQN 453
Query: 476 LMKQM-----GSTKDMMGM 489
+M+Q+ G+ ++M M
Sbjct: 454 MMRQLQGAASGNVNNLMNM 472
>gi|386697527|gb|AFJ22224.1| signal recognition particle protein 54k, partial [Passeroptes sp.
AD798]
Length = 444
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/443 (58%), Positives = 331/443 (74%), Gaps = 7/443 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV KLV+ ++ N++ I++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNLLKEICKALIESDVNIKLVKNLRENVRSIIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPEVKPWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLIVYVMDASIGQACESQARAFKDKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E + +D+ EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-LKLDENDELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ N +KMGPI Q+ SM+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQITNFMKMGPINQILSMIPGFGAELAQCTSEAESMSRLKRMMTIMDSMSDTE 359
Query: 388 LDSSN-PKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMS 444
LD+ + KL R R++RG+G R+V E+L +Y + + +M G+K +G
Sbjct: 360 LDARDGTKLFYKQPKRFFRVSRGAGVTPRDVQELLSQYNKFRAVVKRMGGIKGLFRG--G 417
Query: 445 ALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M K L Q M K I
Sbjct: 418 DLNKNVNPTQMLK-LNQQMAKMI 439
>gi|386697531|gb|AFJ22226.1| signal recognition particle protein 54k, partial [Dermationidae sp.
AD695]
Length = 444
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 260/443 (58%), Positives = 331/443 (74%), Gaps = 7/443 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV KLV+ ++ N++ I++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNLLKEICKALIESDVNIKLVKNLRENVRSIIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPEVKPWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLIVYVMDASIGQACESQARAFKDKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E + +D+ EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-LKLDENDELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ N +KMGPI Q+ SM+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQITNFMKMGPINQILSMIPGFGAELAQCTSEAESMSRLKRMMTIMDSMSDTE 359
Query: 388 LDSSN-PKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMS 444
LD+ + KL R R++RG+G R+V E+L +Y + + +M G+K +G
Sbjct: 360 LDARDGTKLFYKQPKRFFRVSRGAGVTPRDVQELLGQYNKFRAVVKRMGGIKGLFRG--G 417
Query: 445 ALSRNMNAQHMSKVLPQGMLKQI 467
L++N+N M K L Q M K I
Sbjct: 418 DLNKNVNPTQMLK-LNQQMAKMI 439
>gi|313218053|emb|CBY41387.1| unnamed protein product [Oikopleura dioica]
Length = 502
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 256/490 (52%), Positives = 353/490 (72%), Gaps = 24/490 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A++ + N+ +I+E VL +CL ++ ALL+ADV KLV+++ +KK +
Sbjct: 1 MVLADLGRKLTTALRSLGNSPVINEDVLKKCLKDVQSALLEADVNIKLVKQLTDGVKKQI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+LD++ G NKRR+IQ A++ ELC++ DPG + P KG+ SVIMFVGLQGSGKTT+C K
Sbjct: 61 DLDNIGTGLNKRRVIQTAVYKELCRICDPGVKPWKPTKGRSSVIMFVGLQGSGKTTSCIK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKKGWK A+VCADTFRAGA+DQ+KQN TKA+IPFYGS TE DP IA +GVETFK
Sbjct: 121 LAYHYQKKGWKCAVVCADTFRAGAYDQVKQNCTKARIPFYGSLTEPDPAVIAYDGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD+SIGQA QA+AFK V
Sbjct: 181 KEKFDIIIVDTSGRHKQEDSLFEEMLQVNNAVEPDNIIFVMDASIGQACESQAKAFKDQV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+D HAKGGGALSA+AAT+SP++FIGTGEH+DE E F+ F+ +LL MGD
Sbjct: 241 DVGSVIITKLDSHAKGGGALSAIAATQSPIVFIGTGEHIDELEPFETTKFIRKLLNMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK+++ + ++ +L + L +G FTLR MYEQFQNILKMGP Q+ M+PGF ++
Sbjct: 301 EGLIDKVNQ-LKLEDNEDLKKNLQKGRFTLRDMYEQFQNILKMGPFNQIMGMIPGF-NDF 358
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
M KG E++ +DS +L +N R+ R+ARGSG +EV E+++
Sbjct: 359 MNKGHEQDE----------LDSPDGHKLFKNNDD--GSRRLRRVARGSGSSPKEVFELID 406
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQ-------HMSKVLPQGMLKQIGGVGGL 473
+Y++ A++ KM G+ + K G+ LS+NMN Q HM+K++ +L+Q+GG+ GL
Sbjct: 407 QYQKFAQMVKKMGGMGLFKNGD---LSKNMNMQQMNQINGHMAKMMDPRVLQQMGGMDGL 463
Query: 474 QNLMKQMGST 483
+ +M+Q +
Sbjct: 464 KKMMQQFNQS 473
>gi|386697251|gb|AFJ22086.1| signal recognition particle protein 54k, partial [Neottialges
vitzthumi]
Length = 433
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 250/435 (57%), Positives = 333/435 (76%), Gaps = 8/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL ++L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KG+K ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMRKGFKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPF+GSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFFGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+I+TK+DGHAKGGGALSAVAA
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIITKLDGHAKGGGALSAVAAXN 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + ++ EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKHGE 299
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++ E
Sbjct: 300 FTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSE 359
Query: 388 LDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEM 443
LDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 360 LDSREGAKLFSKQPTRIVRVARGAGVMQREVQELLSQYTKFAAVVKKMGGIKGLFKTGD- 418
Query: 444 SALSRNMNAQHMSKV 458
L++N+N M+K+
Sbjct: 419 --LTKNVNPAQMAKL 431
>gi|242055585|ref|XP_002456938.1| hypothetical protein SORBIDRAFT_03g045950 [Sorghum bicolor]
gi|241928913|gb|EES02058.1| hypothetical protein SORBIDRAFT_03g045950 [Sorghum bicolor]
Length = 487
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 285/486 (58%), Positives = 358/486 (73%), Gaps = 45/486 (9%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNI-KKI 59
MVLAQLG S+ A+ QM+ +T++D+KV+ +CLN+++RALLQADV+F+ VR +Q +I +
Sbjct: 1 MVLAQLGESLVGALAQMAKSTVVDDKVVVDCLNDVSRALLQADVRFETVRAVQASIGSAV 60
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDP------GKPS--FTPKKG-KP-SVIMFVGL 109
VNL LAAG ++RR I+ A+ +EL +MLDP GKP F P+KG KP SV+MFVGL
Sbjct: 61 VNLQSLAAGTDRRRAIKHAVVDELRRMLDPAAGGGTGKPPPFFVPRKGRKPASVVMFVGL 120
Query: 110 QGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV 169
QGSGKTTTC KYA YH++ G+ PALVCADTFRAGA DQL+QNA KA IPFYGSYTESDPV
Sbjct: 121 QGSGKTTTCVKYADYHRRTGFSPALVCADTFRAGALDQLRQNAAKAGIPFYGSYTESDPV 180
Query: 170 RIAVEGVETFKK-------ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMD 222
R+AVEGV+ F+ E CDLI+VDTSGRH QEAAL EEMRQ++EAT PDLV+ VMD
Sbjct: 181 RVAVEGVDRFRNADQAAAAEGCDLIVVDTSGRHSQEAALLEEMRQLAEATRPDLVVLVMD 240
Query: 223 SSIGQAAFDQAQAFKQSVSVGAVI-VTKMDGHAK-GGGALSAVAATKSPVIFIGTGEHMD 280
++IGQAAFDQA AFKQSV VGAVI VTKMDGHAK GGGALSAVAATKSPVIFIGTGEH+
Sbjct: 241 ATIGQAAFDQALAFKQSVEVGAVIVVTKMDGHAKGGGGALSAVAATKSPVIFIGTGEHIA 300
Query: 281 EFEVFDVKPFVS-RLLGMGDWSGFMDKIHE-----VVPMDQ-----QPELLQKLS----- 324
+ E FD + FVS RLLGMGD GFMDKI + + DQ + +LL +L+
Sbjct: 301 DLEAFDARSFVSRRLLGMGDLPGFMDKIEDAMTTMTMAADQGQEGLEQQLLHELTTVKGA 360
Query: 325 EGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES--QAKIKRYMTMMDS 382
FTLR +Y F+ + +MGP+G + S LP + L KG+++E Q KIKRYMT+MDS
Sbjct: 361 SFTFTLRALYSLFRLVQRMGPLGHLVSFLP--AGLLGDKGKQEEEGQQDKIKRYMTIMDS 418
Query: 383 MTNEELDSSNP-KLM----NDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKI 437
M+ ELD ++P KLM SRI R+ARGSGR V +V+E+L+E+KR+A++ S++
Sbjct: 419 MSAAELDGADPMKLMMTKQQQSRINRVARGSGRPVSQVVELLQEHKRMAEMLSELAPAHK 478
Query: 438 PKKGEM 443
P G +
Sbjct: 479 PDVGPL 484
>gi|358342721|dbj|GAA50175.1| signal recognition particle subunit SRP54 [Clonorchis sinensis]
Length = 518
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 273/522 (52%), Positives = 369/522 (70%), Gaps = 37/522 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ + NATII+E VLN L EI AL+++DV +LV++++ N++ ++
Sbjct: 1 MVLAELGRKITSALRSLGNATIINEDVLNGLLKEICTALIESDVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR+IIQ A+F +L ++DP ++ P KG +VIM VGLQGSGKTTT TK
Sbjct: 61 DFDEMAAGLNKRKIIQSAVFEQLVHLIDPQVKAWQPTKGTSNVIMLVGLQGSGKTTTATK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+K WK ++CADT+RAGAFDQLKQNATKA+IPFYGSYTE+DPV IA +GV+ F+
Sbjct: 121 LAYYYQRKNWKTCMICADTYRAGAFDQLKQNATKARIPFYGSYTETDPVVIARDGVQKFE 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ ++IIVDTSGRHKQE +LFEEM QVS A PD VI+VMD+SIGQA QA AFK V
Sbjct: 181 DESFEIIIVDTSGRHKQEDSLFEEMLQVSNAIEPDQVIYVMDASIGQACEAQASAFKSKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT SP++FIGTGEH+D+FE F VKPFV +LLG+GD
Sbjct: 241 DVSSVIVTKLDGHAKGGGALSAVAATHSPIVFIGTGEHIDDFEPFRVKPFVQKLLGLGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++++ E + +D+ EL++KL +G FTLR MYEQFQNILK+G QV S +PG +L
Sbjct: 301 EGLVERVTE-LKLDENEELVKKLKQGVFTLRNMYEQFQNILKIGSFSQVLSAIPGLGQDL 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
+ ++ES ++KR MT+MDSM + ELDS +L N R +R+ARG+G EV
Sbjct: 360 L--ANDQESHKRLKRLMTIMDSMNDYELDSDEGARLFNRQPGRTLRVARGAGVSQAEVKL 417
Query: 418 MLEEYKRLAKIWSKMKGLK-----IPKK---------------GEMSALSRNMNA----- 452
+L ++ + + KM G+K P+ EM+A SR+++A
Sbjct: 418 LLTQHTKFYMVVKKMGGIKGLFQTGPRAGASGPSGPGGNPPSLSEMAAASRSVSAGQMAK 477
Query: 453 --QHMSKVLPQGMLKQIGGVGGLQNLMKQMGSTKDMMGMFGG 492
Q M+KVL +L Q+GG+ GLQN+M+Q+ + G FGG
Sbjct: 478 LNQSMAKVLDPRILHQMGGMAGLQNMMRQLQTG----GAFGG 515
>gi|281206952|gb|EFA81136.1| signal recognition particle 54 kDa subunit [Polysphondylium
pallidum PN500]
Length = 504
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/489 (53%), Positives = 355/489 (72%), Gaps = 10/489 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG IS A+ MSN+TII+E+ ++ L E+ AL +ADV KL+ +M+ NIK+ +
Sbjct: 1 MVLADLGNQISSALANMSNSTIINEETIDTLLKEVGNALSRADVSLKLIIQMRKNIKEQL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
LD +AAG NKRRII++ +F+EL K+LDPG + P KGK ++IMFVGLQG+GKTT+ TK
Sbjct: 61 KLDAMAAGLNKRRIIKKVVFDELIKLLDPGVAPWKPTKGKSNIIMFVGLQGAGKTTSVTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++++KGW A+VCADTFRAGAFDQLK NATKAKIPFYGS T+ DPV +A +GV+ FK
Sbjct: 121 LASFYKRKGWATAMVCADTFRAGAFDQLKHNATKAKIPFYGSDTDRDPVAVAKKGVDIFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ ++IIVDTSGRHKQE LF+EM+++ PD VIFVMDSSIGQAAFDQA AFK SV
Sbjct: 181 KDGAEIIIVDTSGRHKQEEELFKEMKEIETVVKPDNVIFVMDSSIGQAAFDQATAFKNSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVG+VI+TKMDG++KGGGA+SAVAATKSP+IFIGTGEH+ + ++FD FVS+LLGMGD
Sbjct: 241 SVGSVIITKMDGNSKGGGAISAVAATKSPIIFIGTGEHIPDLDLFDASSFVSKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G M+ I +VVP D + L++++ G FT R M +QF IL +GPI + M+PG S+
Sbjct: 301 KGMMNMIADVVPKDTKA--LEEIASGKFTFRNMKQQFLQILNLGPIDKFVQMMPGMSN-- 356
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+P+ + K+K Y+ ++DSM++ ELD + + RI+RIARGSGR REV E++E
Sbjct: 357 IPQLQGDAGNLKLKAYINILDSMSDGELDGKHQ--ITPQRILRIARGSGRHPREVAELVE 414
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
+ K K++SK GL+ + N Q ++ ++P M+K++ G+GGLQ++ +
Sbjct: 415 QKKAFEKMFSKGPGLQNLANMAKGGVPNQRNLQQLASMVPPEMMKKM-GMGGLQSM---L 470
Query: 481 GSTKDMMGM 489
S K+M G+
Sbjct: 471 ASVKNMKGL 479
>gi|257205636|emb|CAX82469.1| Signal recognition particle 54 kDa protein [Schistosoma japonicum]
Length = 532
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 267/518 (51%), Positives = 363/518 (70%), Gaps = 41/518 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ + NATII+E VLN L EI AL++ADV +LV++++ N++ ++
Sbjct: 1 MVLAELGRKITNALRSLGNATIINEDVLNSLLKEICTALIEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR+IIQ A+F EL ++DP ++ P +G P+VIM VGLQG GKTTT TK
Sbjct: 61 DFDEMAAGLNKRKIIQSAVFKELVHLVDPQVKAWQPARGSPNVIMLVGLQGCGKTTTATK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK ++CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA +GV+ F
Sbjct: 121 LAYFYQRKGWKTCMICADTFRAGAFDQLKQNATKARIPFYGSYTETDPVVIARDGVQKFV 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRH+QE +LFEEM QVS A PD VI+V+D+SIGQA QA AFK V
Sbjct: 181 EEKFEIIIVDTSGRHRQEDSLFEEMLQVSNAIEPDHVIYVLDASIGQACEAQASAFKAKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT SP+ FIGTGEH+++FE F V+PFV +LLG+GD
Sbjct: 241 DVSSVIVTKLDGHAKGGGALSAVAATHSPITFIGTGEHVEDFEQFRVQPFVQKLLGLGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++++ E + +D+ EL++KL +G FTLR MYEQFQNILK+G QV S +PG +L
Sbjct: 301 EGLVERVTE-LKLDENEELVKKLKQGVFTLRNMYEQFQNILKIGSFSQVLSAIPGLGQDL 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDS--RIMRIARGSGRQVREVME 417
+ ++ES ++KR MT+MDSM + ELDS +L N R +R+ARG+G EV
Sbjct: 360 L--ANDQESHRRLKRLMTIMDSMNDYELDSDEGGRLFNRQPGRTLRVARGAGVSQAEVKL 417
Query: 418 MLEEYKRLAKIWSKMKGLK----------------------------IPKKGEMSALSRN 449
+L ++ + + KM G+K P EM+A SR+
Sbjct: 418 LLTQHSKFYMVVKKMGGIKGLFQTGPKGGAMGGVAGGAGSGAGGSGNTPSLAEMAAASRS 477
Query: 450 MNA-------QHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
++A Q M+KVL +L+Q+GG+ GLQN+M+Q+
Sbjct: 478 VSAGQMAKLNQSMAKVLDPRILQQMGGMAGLQNMMRQL 515
>gi|256082003|ref|XP_002577253.1| signal recognition particle 54 kD protein [Schistosoma mansoni]
gi|353233394|emb|CCD80749.1| putative signal recognition particle 54 kD protein [Schistosoma
mansoni]
Length = 538
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 266/523 (50%), Positives = 362/523 (69%), Gaps = 46/523 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ + NATII+E VLN L EI AL++ADV +LV++++ N++ ++
Sbjct: 1 MVLAELGRKITNALRSLGNATIINEDVLNSLLKEICTALIEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR+IIQ A+F EL ++DP ++ P +G +VIM VGLQG GKTTT TK
Sbjct: 61 DFDEMAAGLNKRKIIQSAVFKELVHLVDPQVKAWQPARGSSNVIMLVGLQGCGKTTTATK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK ++CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA +GV+ F
Sbjct: 121 LAYFYQRKGWKTCMICADTFRAGAFDQLKQNATKARIPFYGSYTETDPVVIARDGVQKFV 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRH+QE +LFEEM QVS A PD VI+V+D+SIGQA QA AFK V
Sbjct: 181 EEKFEIIIVDTSGRHRQEDSLFEEMLQVSNAIEPDHVIYVLDASIGQACEAQASAFKAKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT SP+ FIGTGEH+++FE F V+PFV +LLG+GD
Sbjct: 241 DVSSVIVTKLDGHAKGGGALSAVAATHSPITFIGTGEHVEDFEQFRVQPFVQKLLGLGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++++ E + +D+ EL++KL +G FTLR MYEQFQNILK+G QV S +PG +L
Sbjct: 301 EGLVERVTE-LKLDENEELVKKLKQGVFTLRNMYEQFQNILKIGSFSQVLSAIPGLGQDL 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDS--RIMRIARGSGRQVREVME 417
+ ++ES ++KR MT+MDSM + ELDS +L N R +R+ARG+G EV
Sbjct: 360 L--ANDQESHRRLKRLMTIMDSMNDYELDSDEGGRLFNRQPGRTLRVARGAGVSQAEVKL 417
Query: 418 MLEEYKRLAKIWSKMKGLK---------------------------------IPKKGEMS 444
+L ++ + + KM G+K P EM+
Sbjct: 418 LLTQHNKFYMVVKKMGGIKGLFQTGSKSGAMGGIGGGPGGVGSGGGAGGSGNTPSLAEMA 477
Query: 445 ALSRNMNA-------QHMSKVLPQGMLKQIGGVGGLQNLMKQM 480
A SR+++A Q M+KVL +L+Q+GG+ GLQN+M+Q+
Sbjct: 478 AASRSVSAGQMAKLNQSMAKVLDPRILQQMGGMAGLQNMMRQL 520
>gi|323454201|gb|EGB10071.1| hypothetical protein AURANDRAFT_36724 [Aureococcus anophagefferens]
Length = 497
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/498 (50%), Positives = 357/498 (71%), Gaps = 7/498 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+ +M + T+I E+VL++ L +I ALL+ADV ++V E++ IK
Sbjct: 1 MVLQELGSKLTAALHKMQSVTVISEEVLDKMLKDIAAALLEADVNVRVVMELRKAIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL++ +AG N+R++IQ+A+ EL MLDPG + KKG P+VIMFVGLQG+GKTTT K
Sbjct: 61 NLEEESAGTNRRKMIQKAVVEELAGMLDPGVKAHEMKKGSPNVIMFVGLQGAGKTTTIAK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A ++ +KG+K +VCADTFRAGA+DQL+QNATK + PFYGSYTE+DPVRIA EGV+ FK
Sbjct: 121 FANHYLRKGFKCCMVCADTFRAGAYDQLRQNATKLRCPFYGSYTEADPVRIAQEGVDQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E ++IIVDTSGRHKQE ALFEEM+++ A P VIFV+D++ GQA +QA +F +++
Sbjct: 181 AEKYEVIIVDTSGRHKQETALFEEMQEIRAAIEPQNVIFVLDATQGQAVHEQASSFHEAI 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+V++TK+DGHAKGGGALSAVAAT +P++F+G+GEH D+FE F+ FVSRLLGMGD
Sbjct: 241 DIGSVVITKLDGHAKGGGALSAVAATGAPILFLGSGEHFDDFEPFNAHSFVSRLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +++I + + D+QPEL++K S+G FTLR MYEQF+N++K+GP+ +V +M+PG S
Sbjct: 301 RGLVEQIKDTIGDDKQPELMEKFSKGQFTLRDMYEQFENVMKLGPLSKVMAMIPGIPS-- 358
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
M G ES ++KR+M MMDSMT++ELD+ + SRI R+ARGSG EV +L+
Sbjct: 359 MMGGEGDESNNRLKRFMYMMDSMTDDELDAKVDLNKSASRIERVARGSGCHPMEVQMLLK 418
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMS---ALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQN 475
+K+ + SKM + K G+ + + RN N Q + K + ML+Q+GG L +
Sbjct: 419 CHKQFESVVSKMGKSGLMKGGDAAMAKQMQRNPNQVMQQLHKAMDPRMLQQMGGAQNLMS 478
Query: 476 LMKQMGSTKDMMGMFGGG 493
+M++M + GM G G
Sbjct: 479 MMQEMSKLEGEGGMKGLG 496
>gi|389585354|dbj|GAB68085.1| signal recognition particle 54 kDa protein [Plasmodium cynomolgi
strain B]
Length = 485
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/490 (50%), Positives = 349/490 (71%), Gaps = 20/490 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ + D+ + ECL E+ RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGTQLTCALQKLQASAAADDSAIEECLKEVIRALILADINISYLKDIKSNIKKNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G+NK+R++QQ + EL +L+ K S+ PKKG +VI+FVGLQGS KTTTCTK
Sbjct: 61 EKNIDLYGNNKKRLVQQYVVEELINLLEGKKESYVPKKGSRNVILFVGLQGSEKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A+Y+QKKG+K ALVCADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 FAHYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIASDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVD+SGRHKQE+ LFEEM+QV + P+ ++FV+DS IGQ+
Sbjct: 181 KEKYDLIIVDSSGRHKQESELFEEMKQVESSIKPEEIVFVIDSHIGQS------------ 228
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
++I+TK+DGHAKGGGALSAVA+T P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 229 ---SIIITKIDGHAKGGGALSAVASTGCPITFIGTGEHINDFEKFEAKSFVSRLLGLGDI 285
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G + + EV+ +++QP+L+ +LS+G F LR MY+QFQN+ KMG + +V SM+PGF + L
Sbjct: 286 NGLVSTLKEVIDIEKQPQLINRLSKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGFGNNL 345
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ KG EKE KIK++M +MDSMTNEELD P +NDSR +RI +GSG +++++ E+LE
Sbjct: 346 ISKGTEKEGIEKIKKFMVIMDSMTNEELDCVKP--LNDSRCLRICKGSGTRLQDIRELLE 403
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQNLMK 478
++K L + SKM L + ++ + +L RN M+ ++ ML Q+GG + N++K
Sbjct: 404 QFKFLKNMVSKMGKLGL-RENNLGSLMRNQKQFLSKMNNMIDPSMLGQMGGANNMVNILK 462
Query: 479 QMGSTKDMMG 488
+ D+ G
Sbjct: 463 EFTKMDDLGG 472
>gi|71755401|ref|XP_828615.1| signal recognition particle 54 kDa [Trypanosoma brucei TREU927]
gi|70834001|gb|EAN79503.1| signal recognition particle 54 kDa [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261334497|emb|CBH17491.1| signal recognition particle 54 kDa, putative [Trypanosoma brucei
gambiense DAL972]
Length = 487
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 259/490 (52%), Positives = 336/490 (68%), Gaps = 9/490 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ + + E + E LNE+ RALLQADV K V+E+Q N++ V
Sbjct: 1 MVLAELGQKIGAAISKMSSKSFVGEDDVKEFLNEVARALLQADVNVKTVKELQQNVRAEV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AAG NKR+++Q A+FN + KMLDPG F P KGK S++MFVGLQGSGKTT+CTK
Sbjct: 61 AITAEAAGLNKRKMLQTAVFNGIKKMLDPGVKPFIPAKGKTSIVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG K LVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAAYFQRKGLKTGLVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVIIAKEGVLELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQE+ALFEEM+QV +A P+ ++FVM ++ GQ +QA+ FK+ V
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVQQAVKPNDIVFVMSATDGQGIEEQARQFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VIVTK+DG AKGGGAL+AVA TKSP++FIGTGEH D+FE+F + FVSR+LGMGD
Sbjct: 241 PIGSVIVTKLDGQAKGGGALAAVAMTKSPIVFIGTGEHFDDFELFQPESFVSRMLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+D + + +D EL ++ +G FTLR MYE QN+LKMG + ++ M+PG S
Sbjct: 301 RALVDSMKD-ANIDTDSELYKRFQDGQFTLRDMYEHLQNVLKMGSVSKIMDMIPGMSGFT 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEML 419
G + +K ++ MMDSMT ELD S K M +RI RIARGSG + EV ++
Sbjct: 360 GNAGDAGD--VTLKTFIHMMDSMTAAELDDSRVKKTMTPTRIHRIARGSGHTILEVHNLI 417
Query: 420 EEYKRLAKIWSKMK--GLKIPKKGEMSALSRNMNAQ---HMSKVLPQGMLKQIGGVGGLQ 474
Y + + KM K + +A S M Q ++K L ML+QIGG+ GLQ
Sbjct: 418 TSYTKFEDVVKKMGKVNFKAMTQDSSTAFSGKMGQQQVLQLAKALNPTMLRQIGGLTGLQ 477
Query: 475 NLMKQMGSTK 484
++MKQ+ S K
Sbjct: 478 DIMKQLQSIK 487
>gi|156086872|ref|XP_001610843.1| signal recognition particle SRP54 protein [Babesia bovis T2Bo]
gi|154798096|gb|EDO07275.1| signal recognition particle SRP54 protein, putative [Babesia bovis]
Length = 499
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 266/499 (53%), Positives = 351/499 (70%), Gaps = 9/499 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+L I++A +++ TII E+V++E + +I RALL ADV KLVR+++ N+K V
Sbjct: 1 MVLAELSEQITQAFRKLHARTIITEEVIDEVIGDIVRALLSADVNVKLVRQLRENVKLQV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L A G NKR+ IQ+A+ E ML + + PKKG ++IMFVGLQG+GKTTTCTK
Sbjct: 61 RLHADALGANKRKFIQKAVIEEFINMLSSDRKPYVPKKGHANIIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+AY++QKKGW+ AL+CADTFRAGAFDQLKQNA K KIPF+GSY+E++ VR+A EGV FK
Sbjct: 121 FAYHYQKKGWRTALICADTFRAGAFDQLKQNAAKVKIPFFGSYSEANAVRVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E D+IIVDTSGRHKQE +LFEEMR + EA PD VIFVMDS IGQA +DQA AF + V
Sbjct: 181 EEKYDIIIVDTSGRHKQEESLFEEMRLIHEAVKPDDVIFVMDSHIGQACYDQAAAFNKVV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGAL+AVAAT SP+IFIGTGEH D FE FD K FVSR+LGMGD
Sbjct: 241 DVGSVIITKLDGHAKGGGALAAVAATNSPIIFIGTGEHFDNFEKFDAKSFVSRMLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ I E+V M+ E++ ++S G +TLR MYEQ NILKMGP+ QV SM PG +
Sbjct: 301 NGLINTIQEIVGMNTNKEMVDRISSGIYTLRDMYEQITNILKMGPLSQVVSMFPGMFPGV 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
E+ A IK+++ +MDSMT++ELD P +++SRI+RIARGSG + E+ +++E
Sbjct: 361 FDSNSEQVGVANIKKFLCIMDSMTSDELDCDKP--LSESRIVRIARGSGSTIGEINQLME 418
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV---LPQGMLKQIGGVGGLQNLM 477
YK L K+ K+ + K+ L RN Q MS++ + +L ++GG + M
Sbjct: 419 HYKVLQKLVGKLGKSSLSKENVNQTLMRN-PQQMMSRLQQTIDPKLLSRMGGATNVMKFM 477
Query: 478 K---QMGSTKDMMGMFGGG 493
K QM + MM G G
Sbjct: 478 KEFSQMDGSAAMMKQMGAG 496
>gi|146087779|ref|XP_001465902.1| putative signal recognition particle [Leishmania infantum JPCM5]
gi|398015951|ref|XP_003861164.1| signal recognition particle, putative [Leishmania donovani]
gi|134070003|emb|CAM68333.1| putative signal recognition particle [Leishmania infantum JPCM5]
gi|322499389|emb|CBZ34462.1| signal recognition particle, putative [Leishmania donovani]
Length = 519
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 262/488 (53%), Positives = 347/488 (71%), Gaps = 13/488 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I +AI +MS +++ E + E +NEI RALLQADV +V+++Q +IK +
Sbjct: 1 MVLAELGQKIGQAIHRMSAKSMLGEDDVKELMNEIARALLQADVNVTIVKKLQVSIKTEL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + AG NKR+I+Q A+FN L ++LDPG F P KGK +V+MFVGLQGSGKTT+CTK
Sbjct: 61 ALAEEGAGLNKRKILQNAVFNGLKRILDPGVKPFIPVKGKQNVVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K ALVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAVYFQRKGFKTALVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVAIAKEGVAELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQE+ALFEEM+QV EA P+ ++FVM ++ GQA +QA+ FK+ V
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVEEAVKPNDIVFVMSATDGQAVEEQARNFKEMV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+VIVTK+D KGGGALSAVAAT+SP++FIGTGEH ++F++F+ + FV ++LGMGD
Sbjct: 241 AVGSVIVTKLDCQTKGGGALSAVAATRSPIVFIGTGEHFEDFDLFNPERFVQKMLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G MD + + +D E+ ++L +G FT+R MYE QN+LKMG +G++ MLPG S
Sbjct: 301 GGLMDTMRD-ANIDGNEEVYKRLQDGLFTMRDMYEHLQNVLKMGSVGKIMEMLPGMSGHA 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEML 419
G++ + +K ++ M+DSMT ELD + K+M SR+ RIARGSG V EV ++
Sbjct: 360 ATAGQQGD--IALKGFIHMLDSMTVAELDEAKVKKMMTPSRMHRIARGSGHSVVEVQNLI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALS----RNMNAQHM---SKVLPQGMLKQIGGVGG 472
Y + +I KM KI K M S +M Q M +K+L ML+QIGGVGG
Sbjct: 418 ISYTKFEEIVKKMG--KINFKAMMQDSSGPAAGHMGQQQMGQLAKLLNPNMLRQIGGVGG 475
Query: 473 LQNLMKQM 480
LQ +MKQ+
Sbjct: 476 LQGMMKQL 483
>gi|237830449|ref|XP_002364522.1| signal recognition particle 54 kda protein, putative [Toxoplasma
gondii ME49]
gi|211962186|gb|EEA97381.1| signal recognition particle 54 kda protein, putative [Toxoplasma
gondii ME49]
gi|221507395|gb|EEE32999.1| signal recognition particle 54 kda protein, putative [Toxoplasma
gondii VEG]
Length = 582
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 251/433 (57%), Positives = 328/433 (75%), Gaps = 6/433 (1%)
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+N A G N R+IIQ+ + +E+ ML P + + P+KG +VIMFVGLQGSGKTTTCT
Sbjct: 132 INTRAAAVGVNSRKIIQKCVISEIVAMLTPARQPYVPRKGATNVIMFVGLQGSGKTTTCT 191
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
KYA+Y+Q+KGW+ ALVCADTFRAGAFDQLKQNATK +IPFYGSYTE+DPV+IA EGVE F
Sbjct: 192 KYAHYYQRKGWRVALVCADTFRAGAFDQLKQNATKVRIPFYGSYTEADPVKIAEEGVEQF 251
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
++E D+IIVDTSGRHKQEAALF+EM+QV+EA +PD V+FVMDS IGQA FDQAQAF S
Sbjct: 252 RREKYDMIIVDTSGRHKQEAALFDEMKQVAEAVDPDDVVFVMDSHIGQACFDQAQAFSDS 311
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V VG+VIVTK+DGHAKGGGALSAVAAT +P+IF+G+GEH D+FE F+ FVSRLLG+GD
Sbjct: 312 VDVGSVIVTKLDGHAKGGGALSAVAATGAPIIFLGSGEHFDDFEAFEANSFVSRLLGLGD 371
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
G + E+V +++Q EL+ +LS+G FTL M EQF+N+LKMGPI +V SM+PG S
Sbjct: 372 VGGLFSTLKEMVSVEKQQELMDRLSKGRFTLEDMGEQFRNVLKMGPISKVISMVPGIGSN 431
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
L+ K +E+ +IKR++ +MDSMT+EEL K DSRI+R+A+GSG + EV +L
Sbjct: 432 LISKNQEQAGVMRIKRFLCIMDSMTDEELKCE--KQFTDSRIVRVAQGSGTTLEEVKLLL 489
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV---LPQGMLKQIGGVGGLQNL 476
E++K+ +K+ KM + + K+ + + RN Q MSKV L +LKQ+GG G + NL
Sbjct: 490 EQHKQFSKMVGKMGKIGLTKESALQNMMRNPQ-QMMSKVQNMLDPRILKQMGGAGNMVNL 548
Query: 477 MKQMGSTKDMMGM 489
++++ S + M GM
Sbjct: 549 LRELQSNEGMEGM 561
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 45/61 (73%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS A++++ AT++DE+V+ EC+ + RALLQADV ++V++ + ++ +
Sbjct: 1 MVLAELGEQISGALRRLHTATVVDEQVVQECVMAVCRALLQADVHVRVVQQFKASVTAGI 60
Query: 61 N 61
N
Sbjct: 61 N 61
>gi|23295846|gb|AAN12396.1| signal recognition particle 54 kDa [Trypanosoma brucei]
Length = 487
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 258/490 (52%), Positives = 335/490 (68%), Gaps = 9/490 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ + + E + E NE+ RALLQADV K V+E+Q N++ V
Sbjct: 1 MVLAELGQKIGAAISKMSSKSFVGEDDVKEFXNEVARALLQADVNVKTVKELQQNVRAEV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AAG NKR+++Q A+FN + KMLDPG F P KGK S++MFVGLQGSGKTT+CTK
Sbjct: 61 AITAEAAGLNKRKMLQTAVFNGIKKMLDPGVKPFIPAKGKTSIVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG K LVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAAYFQRKGLKTGLVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVIIAKEGVLELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQE+ALFEEM+QV +A P+ ++FVM ++ GQ +QA+ FK+ V
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVQQAVKPNDIVFVMSATDGQGIEEQARQFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VIVTK+DG AKGGGAL+AVA TKSP++FIGTGEH D+FE+F + FVSR+LGMGD
Sbjct: 241 PIGSVIVTKLDGQAKGGGALAAVAMTKSPIVFIGTGEHFDDFELFQPESFVSRMLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+D + + +D EL ++ +G FTLR MYE QN+LKMG + ++ M+PG S
Sbjct: 301 RALVDSMKD-ANIDTDSELYKRFQDGQFTLRDMYEHLQNVLKMGSVSKIMDMIPGMSGFT 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEML 419
G + +K ++ MMDSMT ELD S K M +RI RIARGSG + EV ++
Sbjct: 360 GNAGDAGD--VTLKTFIHMMDSMTAAELDDSRVKKTMTPTRIHRIARGSGHTILEVHNLI 417
Query: 420 EEYKRLAKIWSKMK--GLKIPKKGEMSALSRNMNAQ---HMSKVLPQGMLKQIGGVGGLQ 474
Y + + KM K + +A S M Q ++K L ML+QIGG+ GLQ
Sbjct: 418 TSYTKFEDVVKKMGKVNFKAMTQDSSTAFSGKMGQQQVLQLAKALNPTMLRQIGGLTGLQ 477
Query: 475 NLMKQMGSTK 484
++MKQ+ S K
Sbjct: 478 DIMKQLQSIK 487
>gi|342185665|emb|CCC95150.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 509
Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust.
Identities = 254/490 (51%), Positives = 337/490 (68%), Gaps = 9/490 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ + + E + E LNE+ RALLQADV K+V+E+Q N++ V
Sbjct: 23 MVLAELGQKIGAAISKMSSKSFVGEDDVKEFLNEVARALLQADVNIKIVKELQNNVRAEV 82
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AAG NKR+++Q A+FN + K+LDPG F P KGK +++MFVGLQGSGKTT+CTK
Sbjct: 83 AITAEAAGLNKRKMLQAAVFNGIKKILDPGVKPFVPAKGKTNIVMFVGLQGSGKTTSCTK 142
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K LVCADTFRAGA+DQL+QNATKAKI FYGS TE+DPV IA EGV K
Sbjct: 143 YAAYFQRKGFKTGLVCADTFRAGAYDQLRQNATKAKIRFYGSLTEADPVLIAKEGVMELK 202
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLII+DTSGRHKQE+ALFEEM++V EA P+ ++FVM ++ GQ DQA+ FK+ V
Sbjct: 203 KEKYDLIIIDTSGRHKQESALFEEMKEVQEAVKPNDIVFVMSATDGQGVEDQARQFKEKV 262
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VIVTK+DG AKGGGAL+AVA TKSP++FIGTGEH D+FE+F FV R+LGMGD
Sbjct: 263 PIGSVIVTKLDGQAKGGGALAAVAMTKSPIVFIGTGEHFDDFELFQPDRFVGRMLGMGDM 322
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+D + + +D L ++L EG FT+R MYE QN+LKMG + ++ M+PG S
Sbjct: 323 QSLVDSMKD-ANIDTDSVLYKRLQEGQFTMRDMYEHLQNVLKMGSVSKIMDMIPGMSG-- 379
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEML 419
M S A +K ++ MMDSMT+ ELD K M +R+ RIARGSG + EV ++
Sbjct: 380 MSGCAGDSSDATLKSFIHMMDSMTSAELDDGRVKKTMTPTRLHRIARGSGHTMFEVHNLI 439
Query: 420 EEYKRLAKIWSKMK--GLKIPKKGEMSALSRNMNAQ---HMSKVLPQGMLKQIGGVGGLQ 474
Y + + KM K + +A S + Q ++K L ML+Q+GG+ GLQ
Sbjct: 440 NSYTKFEDVVKKMGKVNFKAMTQDSSTAFSGRVGQQQVTQLAKALNPAMLRQLGGLSGLQ 499
Query: 475 NLMKQMGSTK 484
++MKQ+ + K
Sbjct: 500 DIMKQLQNVK 509
>gi|325180969|emb|CCA15378.1| signal recognition particle putative [Albugo laibachii Nc14]
Length = 509
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 256/506 (50%), Positives = 358/506 (70%), Gaps = 16/506 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL QLG + A+ ++ TI+D++VLN + ++ ALL++DVQ +LVR+++ N++ V
Sbjct: 1 MVLEQLGSKLQSALAALNTTTIVDDEVLNNIMKDVCAALLESDVQVQLVRQIRDNVRLTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AAG N+RR+IQ+A+ ++L ++L K F KKG + +MFVGLQGSGKTT+ K
Sbjct: 61 AAHESAAGVNRRRLIQKAVLDQLIQILQSKKKPFKLKKGSCNTVMFVGLQGSGKTTSIAK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+Q+KGWK +VCADTFRAGAFDQLKQNATK +IPFYGSYTE+DPVRIA +GV F+
Sbjct: 121 YAHYYQRKGWKTCMVCADTFRAGAFDQLKQNATKLRIPFYGSYTEADPVRIAEQGVAQFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
++ +LI+VDTSGRHKQE LF EM+QV+ A PD V+FVMDS+IGQA +DQ+ AF QSV
Sbjct: 181 ADHYELILVDTSGRHKQETDLFAEMKQVAAAVRPDDVVFVMDSTIGQAVYDQSSAFVQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT SP+IF GTGEH E E FD + FVSR++GMGD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVAATGSPIIFYGTGEHFSELETFDAQRFVSRMMGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS--- 357
G M+++ + D + EL+ K +G++TLR +Y+Q Q ++KMGP+ +V SM+PG
Sbjct: 301 RGLMEEVKQSGIFDDEKELMSKFQKGSYTLRDLYKQLQGVMKMGPLSKVMSMIPGLPPGM 360
Query: 358 SELMP-KGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 416
+++M G E+E +++R++ MMDSMT+ ELD P +N SR +RIA+GSG + EV
Sbjct: 361 NQMMNMGGGEEEGSKRLRRFLFMMDSMTDAELDGQVP--INPSRQIRIAKGSGCGLFEVD 418
Query: 417 EMLEEYKRLAKIWSKMKGLKIPKKGEMS---ALSRNMNA--QHMSKVLPQGMLKQIGGVG 471
+L+ +K+ A + S+M + K G+ L+RN NA Q +SKV+ +L Q+GG
Sbjct: 419 YLLKCHKQFATVISRMGKSGLMKTGDAGFEKQLARNPNAVMQQLSKVMDSRVLAQMGGPQ 478
Query: 472 GLQNLMKQM-----GSTKDMMGMFGG 492
+ ++KQM S +M FGG
Sbjct: 479 NMMRMLKQMQGMDSNSMNEMAANFGG 504
>gi|328874643|gb|EGG23008.1| signal recognition particle 54 kDa subunit [Dictyostelium
fasciculatum]
Length = 502
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 268/510 (52%), Positives = 355/510 (69%), Gaps = 33/510 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA G IS A+ MSN+TII+E+ +N L E+ AL +ADV L+ +M+ NI+ +
Sbjct: 1 MVLADWGNQISSALAAMSNSTIINEETINHLLKEVGNALSRADVSMSLIIKMRKNIQAQI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
LD +AAG NKRRII++ +F+EL K+LDPG + P KGK ++IMFVGLQG+GKTT+ TK
Sbjct: 61 KLDQMAAGLNKRRIIRKVVFDELIKLLDPGVTPWKPTKGKSNIIMFVGLQGAGKTTSVTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+++++KGW A+VCADTFRAGAF QL+ NATKAKIPFYGS +E DPV A +GVE F+
Sbjct: 121 LAHFYKRKGWNTAMVCADTFRAGAFAQLQHNATKAKIPFYGSESEKDPVAAAKKGVEIFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE+ LF+EM ++ PD VIFVMDSSIGQAA+DQA AFK SV
Sbjct: 181 KEGAEIIIVDTSGRHKQESELFKEMSEIETVIQPDNVIFVMDSSIGQAAYDQAMAFKTSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TKMDG++KGGGA+SAVAAT+SP+IFIG+GEH+ + E+F+ FVS+LLG+GD
Sbjct: 241 KVGSVIITKMDGNSKGGGAISAVAATQSPIIFIGSGEHIPDLEIFNPTSFVSKLLGLGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ I +VVP D P +++SEGNFT R M +QFQ I+ MGPI ++ M PG S+
Sbjct: 301 NGMVEMIQDVVPPD--PNAWKEMSEGNFTFRNMKQQFQQIMNMGPIEKIVQMFPGMSN-- 356
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MP + E K+K YMT++DSMT++ELD K MN SR++RIARGSGR REV E+ E
Sbjct: 357 MPMLQGGEGNLKLKAYMTILDSMTDDELDGK--KQMNPSRMLRIARGSGRHPREVGELTE 414
Query: 421 EYKRLAKIWSKMKGL----KIPKKGEMSALSRNMNAQHMSKVLP-------------QGM 463
+ K K++ K GL + G+ + N Q ++ ++P Q M
Sbjct: 415 QKKMFEKMFKKGGGLSNLANMAGGGKGGQMPNPKNLQQLAGMVPPQMMKQMGGMGGIQSM 474
Query: 464 LKQIGGVGGLQNL-MKQMGSTKDMMGMFGG 492
L Q L+N+ MK MG DMM FGG
Sbjct: 475 LGQ------LKNMNMKGMG---DMMKNFGG 495
>gi|294948604|ref|XP_002785803.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
gi|239899911|gb|EER17599.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
Length = 506
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/496 (51%), Positives = 350/496 (70%), Gaps = 14/496 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATII----DEKVLNECLNEITRALLQADVQFKLVREMQTNI 56
MVL L ++ A++ + A D++ L ECL EI +ALLQADV K V +++ +I
Sbjct: 1 MVLNDLSSQLTSALRSLQKAASSLNEEDDEPLEECLKEIAKALLQADVNVKYVSKLRQSI 60
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ + L + A N+ + +++ +F+EL K+L P + T KG+ +V+MFVGLQGSGKTT
Sbjct: 61 RTQMKLYE-GAAINRHKTVRKLVFDELVKLLTPSRAPRTLTKGRSNVVMFVGLQGSGKTT 119
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
+CTKYA Y+Q++GWK ALVCADTFRAGAFDQL+QNATKA IPFYGS+T +DPV++A EGV
Sbjct: 120 SCTKYALYYQRRGWKVALVCADTFRAGAFDQLRQNATKALIPFYGSHTITDPVQVASEGV 179
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
E FK+E DLIIVDTSGRHKQE ALF+EM+QVSEA PD VIFVMDS IGQA QA AF
Sbjct: 180 ELFKEERYDLIIVDTSGRHKQELALFDEMKQVSEAVKPDDVIFVMDSHIGQACSAQAAAF 239
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
+V VG+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F+VK FV RLLG
Sbjct: 240 SNAVDVGSVIITKLDGHAKGGGALSAVAATDSPIIFIGTGEHLDDFERFEVKGFVGRLLG 299
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGN-FTLRIMYEQFQNILKMGPIGQVFSMLPG 355
+GD +G D I V +D+Q + +++L G FTLR +Y Q Q ++ MG + ++ SMLPG
Sbjct: 300 IGDLAGLADSIANAVDIDEQKKTMERLQAGKAFTLRDLYSQLQAVMNMGSMSKMLSMLPG 359
Query: 356 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREV 415
+P ++ S +IKR++ MMDS+T E+DS+ P + +RIMRI+RGSG V
Sbjct: 360 MGGSSLPTMSDEASVKRIKRFLVMMDSLTAAEMDSAKP-ITEGTRIMRISRGSGSHPYAV 418
Query: 416 MEMLEEYKRLAKIWSKM--KGLKIPKKGEMSALSRNMNAQHMSKV---LPQGMLKQIGGV 470
+E++EE+K++ K+ +M GL + K G+++ + RN Q +SK+ + L ++GG
Sbjct: 419 IELIEEHKKMQKMLQRMGKTGL-LSKAGDLTNMVRNPQ-QVISKLKASVDHDTLAKMGGA 476
Query: 471 GGLQNLMKQMGSTKDM 486
++MK+M ++M
Sbjct: 477 ENFFSMMKEMEQNEEM 492
>gi|221487598|gb|EEE25830.1| signal recognition particle 54 kda protein, putative [Toxoplasma
gondii GT1]
Length = 714
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 248/431 (57%), Positives = 328/431 (76%), Gaps = 6/431 (1%)
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+N A G N R+IIQ+ + +E+ ML P + + P+KG +VIMFVGLQGSGKTTTCT
Sbjct: 132 INTRAAAVGVNSRKIIQKCVISEIVAMLTPARQPYVPRKGATNVIMFVGLQGSGKTTTCT 191
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
KYA+Y+Q+KGW+ ALVCADTFRAGAFDQLKQNATK +IPFYGSYTE+DPV+IA EGVE F
Sbjct: 192 KYAHYYQRKGWRVALVCADTFRAGAFDQLKQNATKVRIPFYGSYTEADPVKIAEEGVEQF 251
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
++E D+IIVDTSGRHKQEAALF+EM+QV+EA +PD V+FVMDS IGQA FDQAQAF +S
Sbjct: 252 RREKYDMIIVDTSGRHKQEAALFDEMKQVAEAVDPDDVVFVMDSHIGQACFDQAQAFSES 311
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V VG+VIVTK+DGHAKGGGALSAVAAT +P+IF+G+GEH D+FE F+ FVSRLLG+GD
Sbjct: 312 VDVGSVIVTKLDGHAKGGGALSAVAATGAPIIFLGSGEHFDDFEAFEANSFVSRLLGLGD 371
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
G + E+V +++Q EL+ +LS+G FTL M EQF+N+LKMGPI +V SM+PG S
Sbjct: 372 VGGLFSTLKEMVSVEKQQELMDRLSKGRFTLEDMGEQFRNVLKMGPISKVISMVPGIGSN 431
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
L+ K +E+ +IKR++ +MDSMT+EEL K DSRI+R+A+GSG + EV +L
Sbjct: 432 LISKNQEQAGVMRIKRFLCIMDSMTDEELKCE--KQFTDSRIVRVAQGSGTTLEEVKLLL 489
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV---LPQGMLKQIGGVGGLQNL 476
E++K+ +K+ KM + + K+ + + RN Q MSKV L +LKQ+GG G + NL
Sbjct: 490 EQHKQFSKMVGKMGKIGLTKESALQNMMRNPQ-QMMSKVQNMLDPRILKQMGGAGNMVNL 548
Query: 477 MKQMGSTKDMM 487
++++ +T ++
Sbjct: 549 LREVKNTLTLL 559
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 45/61 (73%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS A++++ AT++DE+V+ EC+ + RALLQADV ++V++ + ++ +
Sbjct: 1 MVLAELGEQISGALRRLHTATVVDEQVVQECVMAVCRALLQADVHVRVVQQFKASVTAGI 60
Query: 61 N 61
N
Sbjct: 61 N 61
>gi|401411601|ref|XP_003885248.1| Signal recognition particle GTPase, related [Neospora caninum
Liverpool]
gi|325119667|emb|CBZ55220.1| Signal recognition particle GTPase, related [Neospora caninum
Liverpool]
Length = 583
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 247/433 (57%), Positives = 328/433 (75%), Gaps = 6/433 (1%)
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+N A G N R+IIQ+ + +E+ ML P + + P+KG +VIMFVGLQGSGKTTTCT
Sbjct: 133 INTRAAAVGVNSRKIIQKCVISEIVAMLTPARQPYVPRKGATNVIMFVGLQGSGKTTTCT 192
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K+A+Y+Q+KGW+ ALVCADTFRAGAFDQLKQNATK +IPFYGSYTE+DPV+IA EGVE F
Sbjct: 193 KFAHYYQRKGWRVALVCADTFRAGAFDQLKQNATKVRIPFYGSYTEADPVKIAEEGVEQF 252
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+KE D+IIVDTSGRHKQEAALF+EM+QV+EA +PD V+FVMDS IGQA F+QAQAF +S
Sbjct: 253 RKEKYDMIIVDTSGRHKQEAALFDEMKQVAEAVDPDDVVFVMDSHIGQACFEQAQAFSES 312
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V VG+VI+TK+DGHAKGGGALSAVAAT +P+IF+G+GEH D+FE F+ FVSRLLG+GD
Sbjct: 313 VDVGSVIITKLDGHAKGGGALSAVAATGAPIIFLGSGEHFDDFEAFEANSFVSRLLGLGD 372
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
G + E+V +++Q EL+ +LS+G FTL M EQF+N+LKMGPI +V SM+PG S
Sbjct: 373 VGGLFSTLKEMVSVEKQQELMDRLSKGRFTLEDMGEQFRNVLKMGPISKVISMVPGIGSN 432
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
L+ K +E+ +IKR++ +MDSMT+EEL K DSRI+R+A+GSG + EV +L
Sbjct: 433 LISKNQEQAGVMRIKRFLCIMDSMTDEELKCD--KQFTDSRILRVAQGSGTSLEEVKILL 490
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV---LPQGMLKQIGGVGGLQNL 476
+++K+ +K+ KM + + K+ + + RN Q MSKV L +LKQ+GG G + NL
Sbjct: 491 DQHKQFSKMVGKMGKIGLTKESALQNMMRNPQ-QMMSKVQNMLDPRILKQMGGAGNMVNL 549
Query: 477 MKQMGSTKDMMGM 489
++++ S + M M
Sbjct: 550 LRELQSKEGMEDM 562
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 45/61 (73%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS A++++ AT++DE+V+ EC+ + RALLQADV ++V++ + ++ +
Sbjct: 1 MVLAELGEQISGALRRLHTATVVDEQVVQECVMAVCRALLQADVHVRVVQQFKASVTAGI 60
Query: 61 N 61
N
Sbjct: 61 N 61
>gi|340058713|emb|CCC53073.1| putative signal recognition particle [Trypanosoma vivax Y486]
Length = 487
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 258/490 (52%), Positives = 335/490 (68%), Gaps = 9/490 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ + + E + E LN++ ALLQADV K V+E+Q ++ V
Sbjct: 1 MVLAELGQKIGAAISKMSSKSFVGEDDVKEFLNDVGCALLQADVNVKTVKELQKSVLSEV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G NKR+++Q A+FN + KMLDPG FTP KGK SV+MFVGLQG+GKTT+CTK
Sbjct: 61 AITSEAVGLNKRKMLQTAVFNGIKKMLDPGVKPFTPVKGKTSVVMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y+Q+KG+K LVCADTFRAGA+DQL+QNATKAKI FYGS TE+DP IA EGV K
Sbjct: 121 YAAYYQRKGFKTGLVCADTFRAGAYDQLRQNATKAKIRFYGSLTEADPAIIAKEGVAELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E +LIIVDTSGRHKQE+ALFEEM+QV +A P+ V+FVM ++ GQ +QA+ FK+ V
Sbjct: 181 REKYELIIVDTSGRHKQESALFEEMKQVQDAVQPNDVVFVMSATDGQGIEEQARQFKEHV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VIVTK+DG AKGGGAL+AV +TKSP++FIGTGEH DEFE+F + FVSRLLGMGD
Sbjct: 241 PVGSVIVTKLDGQAKGGGALAAVVSTKSPIVFIGTGEHFDEFELFQPESFVSRLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+D + + +D EL ++ EG FT+R MYE QN+LKMG + ++ MLPG + +
Sbjct: 301 RALVDTMKD-ANIDTDSELYKRFQEGQFTMRDMYEHLQNVLKMGSMSKIMGMLPGMAGQS 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEML 419
G + IK ++ +MDSMT ELD S K+M SRI R+ARGSG + EV ++
Sbjct: 360 DAAGEMGD--VTIKSFIHIMDSMTGVELDDSRVKKMMTPSRIHRVARGSGHSILEVQNLI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGE--MSALSRNMNAQHMS---KVLPQGMLKQIGGVGGLQ 474
Y + + KM + E S LS + Q MS K L ML+QIGG+ GLQ
Sbjct: 418 NSYMKFEDVVKKMGKVNFKAMSEDPGSILSGRLGQQQMSQLAKALNPTMLRQIGGLSGLQ 477
Query: 475 NLMKQMGSTK 484
+MKQ+ K
Sbjct: 478 EMMKQLQGIK 487
>gi|426376696|ref|XP_004055129.1| PREDICTED: signal recognition particle 54 kDa protein [Gorilla
gorilla gorilla]
Length = 502
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 261/513 (50%), Positives = 357/513 (69%), Gaps = 37/513 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPF------------YGSYTESDP 168
C+ +L + +I F SYTE DP
Sbjct: 121 --------------TCSRIILGFGIGKLDNASCFFRIVFGSFVVLLNHLSMLYSYTEMDP 166
Query: 169 VRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQA 228
V IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA
Sbjct: 167 VIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQA 226
Query: 229 AFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVK 288
QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +
Sbjct: 227 CEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQ 286
Query: 289 PFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQ 348
PF+S+LLGMGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q
Sbjct: 287 PFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQ 345
Query: 349 VFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIA 405
+ M+PGF ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+A
Sbjct: 346 ILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVA 405
Query: 406 RGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLP 460
RGSG R+V E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++
Sbjct: 406 RGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMD 465
Query: 461 QGMLKQIGGVGGLQNLMKQM--GSTKDMMGMFG 491
+L +GG+ GLQ++M+Q G+ +M GM G
Sbjct: 466 PRVLHHMGGMAGLQSMMRQFQQGAAGNMKGMMG 498
>gi|327291942|ref|XP_003230679.1| PREDICTED: signal recognition particle 54 kDa protein-like, partial
[Anolis carolinensis]
Length = 425
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/425 (57%), Positives = 323/425 (76%), Gaps = 17/425 (4%)
Query: 80 FNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADT 139
+ + +++DPG ++TP KGK ++IMFVGLQGSGKTT+C+K AYY+Q+KGWK L+CADT
Sbjct: 1 YTIILQLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTSCSKLAYYYQRKGWKTCLICADT 60
Query: 140 FRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEA 199
+RAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHKQE
Sbjct: 61 YRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQED 120
Query: 200 ALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGA 259
+LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V V +VIVTK+DGHAKGGGA
Sbjct: 121 SLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGA 180
Query: 260 LSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPEL 319
LSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD G +DK++E + +D L
Sbjct: 181 LSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEAL 239
Query: 320 LQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTM 379
++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++ M KG E+ES A++++ MT+
Sbjct: 240 IEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLRKLMTI 299
Query: 380 MDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK 436
MDSM ++ELDS++ K+ + RI R+ARGSG R+V E+L +Y + A++ KM G+K
Sbjct: 300 MDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIK 359
Query: 437 -IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGGVGGLQNLMKQM--GSTKDM 486
+ K G+M S+N+N Q M+K++ +L +GG+ GLQ++M+Q G+ +M
Sbjct: 360 GLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGLQSMMRQFQQGAAGNM 416
Query: 487 MGMFG 491
GM G
Sbjct: 417 KGMMG 421
>gi|407425446|gb|EKF39427.1| signal recognition particle, putative [Trypanosoma cruzi
marinkellei]
Length = 484
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 257/490 (52%), Positives = 338/490 (68%), Gaps = 12/490 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ ++ E + E LNE+ RALLQADV V+E+Q I+ V
Sbjct: 1 MVLAELGQKIGGAISKMSSKPLLGEDDVKEFLNEVARALLQADVHVTTVKELQQTIRAEV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G NKR+++Q A+F+ L ++LDPG F P KGK +++MFVGLQGSGKTT+CTK
Sbjct: 61 AITSEAVGLNKRKMLQTAVFSGLKRILDPGIKPFIPAKGKTNIVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG K ALVCADTFRAGA+DQL+QNATKAKI FYGS TE+DPV IA EGV +
Sbjct: 121 YAAYFQRKGLKTALVCADTFRAGAYDQLRQNATKAKIRFYGSLTEADPVIIAKEGVTELE 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLII+DTSGRHKQE+ALFEEM+QV EA P+ ++FVM ++ GQ +QAQ FK+ V
Sbjct: 181 KEKYDLIIIDTSGRHKQESALFEEMKQVQEAVKPNDIVFVMSATDGQGIREQAQQFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGAL+AVA TKSP++FIGTGEH ++FE+F + FVSR+LGMGD
Sbjct: 241 PVGSVIITKLDGHAKGGGALAAVAMTKSPIVFIGTGEHFEDFELFQPESFVSRMLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
MD + + +D EL ++L +G FT+R MYE QN+LK+GP+ +V +++PG SS
Sbjct: 301 RALMDTMKD-AKIDTDSELYKRLQDGLFTMRDMYEHLQNLLKLGPVSKVMNLIPGMSSFS 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEML 419
G + +K + +MDSMT ELD + K M SRI+R+ARGSG + EV +++
Sbjct: 360 GFAG--EVGDVALKSLIHIMDSMTASELDDARVKKTMTPSRILRVARGSGHSIHEVHKLI 417
Query: 420 EEYKRLAKIWSKMK--GLKIPKKGEMSALSRNMNAQHMS---KVLPQGMLKQIGGVGGLQ 474
+ Y ++ KM K K LS M Q M+ KVL ML+Q+GGV Q
Sbjct: 418 KMYTNFEEMVKKMGKMNFKAMSKDPSGMLSGRMGQQQMTQLAKVLNPAMLQQMGGV---Q 474
Query: 475 NLMKQMGSTK 484
LMKQ+ + K
Sbjct: 475 GLMKQLKNLK 484
>gi|154338231|ref|XP_001565340.1| putative signal recognition particle [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062389|emb|CAM42250.1| putative signal recognition particle [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 566
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/486 (52%), Positives = 340/486 (69%), Gaps = 9/486 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I +AI +MS +++ E + E +NEI RALLQADV +V+++Q +IK +
Sbjct: 45 MVLAELGQKIGQAIHRMSAKSVLSEDDVKELMNEIARALLQADVNVAIVKKLQVSIKTEL 104
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + G NKR+I+Q A+F L ++LDPG F P KGK +V++FVGLQGSGKTT+CTK
Sbjct: 105 ALAEEGVGLNKRKILQNAVFKGLQRILDPGVKPFMPVKGKQNVVLFVGLQGSGKTTSCTK 164
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K ALVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 165 YAAYFQRKGFKTALVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVAIAREGVAELK 224
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQEAALFEEM+QV EA P+ ++FVM ++ GQA QA FK V
Sbjct: 225 KEKYDLIIVDTSGRHKQEAALFEEMKQVEEAVKPNDIVFVMSATDGQAVEAQASHFKAMV 284
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VIVTK+D KGGGALSAVAAT+SP++FIGTGEH D+F++F + FV ++LGMGD
Sbjct: 285 PVGSVIVTKLDCQTKGGGALSAVAATRSPIVFIGTGEHFDDFDLFRPERFVQKMLGMGDI 344
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G MD + + ++ E+ ++L +G FT+R MYE QN+LKMG +G++ MLPG +
Sbjct: 345 GGLMDTMRD-ANINGNEEVYKRLQDGLFTMRDMYEHLQNVLKMGSVGKIMEMLPGMAGHA 403
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEML 419
G++ + +K ++ M+DSMT ELD + K+M SR+ RIARGSG V EV ++
Sbjct: 404 GAAGQQGD--IALKGFIHMLDSMTVAELDEAKVKKMMTPSRMHRIARGSGHSVVEVQNLI 461
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSA--LSRNMNAQHM---SKVLPQGMLKQIGGVGGLQ 474
Y + +I KM + + S+ S +M Q M +K+L ML+QIGGVGGLQ
Sbjct: 462 ISYTKFEEIVKKMGKINFKTMMQDSSGPASGHMGQQQMGQLAKLLNPNMLRQIGGVGGLQ 521
Query: 475 NLMKQM 480
+MKQ+
Sbjct: 522 GMMKQL 527
>gi|257216394|emb|CAX82402.1| Signal recognition particle 54 kDa protein [Schistosoma japonicum]
Length = 461
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/439 (55%), Positives = 329/439 (74%), Gaps = 6/439 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ + NATII+E VLN L EI AL++ADV +LV++++ N++ ++
Sbjct: 1 MVLAELGRKITNALRSLGNATIINEDVLNSLLKEICTALIEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR+IIQ A+F EL ++DP ++ P +G P+VIM VGLQG GKTTT TK
Sbjct: 61 DFDEMAAGLNKRKIIQSAVFKELVHLVDPQVKAWQPARGSPNVIMLVGLQGCGKTTTATK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK ++CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA +GV+ F
Sbjct: 121 LAYFYQRKGWKTCMICADTFRAGAFDQLKQNATKARIPFYGSYTETDPVVIARDGVQKFV 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRH+QE +LFEEM QVS A PD VI+V+D+SIGQA QA AFK V
Sbjct: 181 EEKFEIIIVDTSGRHRQEDSLFEEMLQVSNAIEPDHVIYVLDASIGQACEAQASAFKAKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT SP+ FIGTGEH+++FE F V+PFV +LLG+GD
Sbjct: 241 DVSSVIVTKLDGHAKGGGALSAVAATHSPITFIGTGEHVEDFEQFRVQPFVQKLLGLGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++++ E + +D+ EL++KL +G FTLR MYEQFQNILK+G QV S +PG +L
Sbjct: 301 EGLVERVTE-LKLDENEELVKKLKQGVFTLRNMYEQFQNILKIGSFSQVLSAIPGLGQDL 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDS--RIMRIARGSGRQVREVME 417
+ ++ES ++KR MT+MDSM + ELDS +L N R +R+ARG+G EV
Sbjct: 360 L--ANDQESHRRLKRLMTIMDSMNDYELDSDEGGRLFNRQPGRTLRVARGAGVSQAEVKL 417
Query: 418 MLEEYKRLAKIWSKMKGLK 436
+L ++ + + KM G+K
Sbjct: 418 LLTQHSKFYMVVKKMGGIK 436
>gi|294889453|ref|XP_002772820.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
gi|239877370|gb|EER04636.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
Length = 508
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/498 (50%), Positives = 348/498 (69%), Gaps = 16/498 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATII----DEKVLNECLNEITRALLQADVQFKLVREMQTNI 56
MVL L ++ A++ + A D++ L ECL EI +ALLQADV K V +++ +I
Sbjct: 1 MVLNDLSSQLTSALRSLQKAASSLNEEDDEPLEECLKEIAKALLQADVNVKYVSKLRQSI 60
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ + L + A N+ + +++ +F+EL K+L P + T KG+ +V+MFVGLQGSGKTT
Sbjct: 61 RTQMKLYE-GAAINRHKTVRKLVFDELVKLLTPSRAPRTLTKGRSNVVMFVGLQGSGKTT 119
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
+CTKYA Y+Q++GWK ALVCADTFRAGAFDQL+QNATKA IPFYGS+T +DPV++A EGV
Sbjct: 120 SCTKYALYYQRRGWKVALVCADTFRAGAFDQLRQNATKALIPFYGSHTITDPVQVASEGV 179
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSE--ATNPDLVIFVMDSSIGQAAFDQAQ 234
E FK+E DLIIVDTSGRHKQE ALF+EM+QV + + D VIFVMDS IGQA QA
Sbjct: 180 ELFKEERYDLIIVDTSGRHKQELALFDEMKQVRQWGSGEADDVIFVMDSHIGQACSAQAA 239
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AF +V VG+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F+VK FV RL
Sbjct: 240 AFSNAVDVGSVIITKLDGHAKGGGALSAVAATDSPIIFIGTGEHLDDFERFEVKGFVGRL 299
Query: 295 LGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN-FTLRIMYEQFQNILKMGPIGQVFSML 353
LGMGD +G D I V +D+Q + +++L G FTLR +Y Q Q ++ MG + ++ SML
Sbjct: 300 LGMGDLAGLADSIANAVDIDEQKKTMERLQAGKAFTLRDLYSQLQAVMNMGSMSKMLSML 359
Query: 354 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 413
PG +P ++ S +IKR++ MMDS+T E+DS+ P + +RIMRI+RGSG
Sbjct: 360 PGMGGSSLPTMSDEASVKRIKRFLVMMDSLTAAEMDSAKP-ITEGTRIMRISRGSGSHPY 418
Query: 414 EVMEMLEEYKRLAKIWSKM--KGLKIPKKGEMSALSRNMNAQHMSKV---LPQGMLKQIG 468
V+E++EE+K++ K+ +M GL + K G+++ + RN Q +SK+ + L ++G
Sbjct: 419 AVIELIEEHKKMQKMLQRMGKTGL-LSKAGDLTNMVRNPQ-QVISKLKASVDHDTLAKMG 476
Query: 469 GVGGLQNLMKQMGSTKDM 486
G ++MK+M ++M
Sbjct: 477 GAENFFSMMKEMEQNEEM 494
>gi|380028787|ref|XP_003698068.1| PREDICTED: uncharacterized protein LOC100872792 [Apis florea]
Length = 1038
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/364 (62%), Positives = 292/364 (80%), Gaps = 1/364 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRLVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG ++ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPIKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAIQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G +DK++E + +D ELL+K+ G FTLR MYEQFQN++KMGP Q+ + L F+S
Sbjct: 301 EGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMYEQFQNVMKMGPFSQLMASLIFFASLF 359
Query: 361 MPKG 364
K
Sbjct: 360 YSKS 363
>gi|213408098|ref|XP_002174820.1| signal recognition particle protein [Schizosaccharomyces japonicus
yFS275]
gi|212002867|gb|EEB08527.1| signal recognition particle protein [Schizosaccharomyces japonicus
yFS275]
Length = 537
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/483 (49%), Positives = 339/483 (70%), Gaps = 28/483 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV + LG ++ A+ ++S + +++++V++ L I +ALL++DV +LV+E++ NIKK +
Sbjct: 1 MVFSDLGRRLNAALGELSKSDVVNDEVVDGVLKSICKALLESDVNVRLVQELRGNIKKRI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N+ L AG N +R++Q+A+F+ELC +LDP +FTPKKG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 NVKSLPAGPNGKRVVQKAVFDELCDLLDPKTQAFTPKKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y+Q++G+K LV ADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV +A GV+ FK
Sbjct: 121 LALYYQRRGFKSCLVAADTFRAGAFDQLKQNALKARIPFYGSYTEADPVVVAQTGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF EM ++SEA P+ I V+D+SIGQAA Q++AFK+S
Sbjct: 181 KERFDIIIVDTSGRHQQEKELFNEMIEISEAVRPNQTIMVLDASIGQAAESQSRAFKESA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ GAVIVTK+DGHAKGGGALSAVAATK+P+IFIGTGEH+++ E F + F+S+LLGMGD
Sbjct: 241 NFGAVIVTKLDGHAKGGGALSAVAATKTPIIFIGTGEHINDLERFSPRSFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++ + + +D+Q +++ L +G FT+R +Q NI+K+GP+ ++ SM+PG ++
Sbjct: 301 EGLLEHVQS-LGLDKQQNMVKNLEQGKFTVRDFRDQLSNIMKLGPLSKMASMIPGM-GDM 358
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M + E ++KR + ++DSMT +EL+S +RIMR+ARGSG V EV E L
Sbjct: 359 MNGMDDAEGSMRMKRMLFIVDSMTEQELNSDGLIFKEQPTRIMRVARGSGTSVLEVEETL 418
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 479
+ + A++ KM G G+L Q+GG GGL+ KQ
Sbjct: 419 SQVRVFAQMAKKMGG-------------------------KDGILNQMGGAGGLKKDPKQ 453
Query: 480 MGS 482
+ +
Sbjct: 454 IAA 456
>gi|401422796|ref|XP_003875885.1| putative signal recognition particle [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492125|emb|CBZ27399.1| putative signal recognition particle [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 519
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 252/475 (53%), Positives = 335/475 (70%), Gaps = 13/475 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I +AI +MS +++ E + E +NEI RALLQADV +V+++Q +IK +
Sbjct: 1 MVLAELGQKIGQAIHRMSAKSMLGEDDVKELMNEIARALLQADVNVTIVKKLQVSIKTEL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + AG NKR+I+Q A+FN L ++LDPG F P KGK +V+MFVGLQGSGKTT+CTK
Sbjct: 61 ALAEEGAGLNKRKILQNAVFNGLKRILDPGVKPFIPVKGKQNVVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K ALVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAAYFQRKGFKAALVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVAIAKEGVAELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQE+ALFEEM+QV EA P+ ++FVM ++ GQA +QA+ FK+ V
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVEEAVKPNDIVFVMSATDGQAVEEQARNFKEMV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+VIVTK+D KGGGALSAVAAT+SP++FIGTGEH ++F++F+ + FV ++LGMGD
Sbjct: 241 AVGSVIVTKLDCQTKGGGALSAVAATRSPIVFIGTGEHFEDFDLFNPERFVQKMLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G MD + + +D E+ ++L +G FT+R MYE QN+LKMG +G++ MLPG S
Sbjct: 301 GGLMDTMRD-ANIDGNEEVYKRLQDGLFTMRDMYEHLQNVLKMGSVGKIMEMLPGMSGHA 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEML 419
G++ + +K ++ M+DSMT ELD + K+M SR+ RIARGSG V EV ++
Sbjct: 360 ATAGQQGD--IALKGFIHMLDSMTVAELDEAKVKKMMTPSRMHRIARGSGHSVVEVQNLI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALS----RNMNAQHM---SKVLPQGMLKQI 467
Y + +I KM KI K M S +M Q M +K+L ML+QI
Sbjct: 418 ISYTKFEEIVKKMG--KINFKAMMQDSSGPAAGHMGQQQMGQLAKLLNPNMLRQI 470
>gi|300123716|emb|CBK24988.2| unnamed protein product [Blastocystis hominis]
Length = 521
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/496 (49%), Positives = 344/496 (69%), Gaps = 8/496 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG ++ A+ ++ + IID+ V+NE + EI+ ALL +DV K+V +++ IK V
Sbjct: 1 MVLAELGKGLTSALSKLQTSVIIDDNVVNEVIKEISNALLHSDVNLKIVMKLRETIKNRV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ AAG NK R+IQ+A++ EL ML P + F P +G+ +VIMFVGLQGSGKTTT
Sbjct: 61 TIECQAAGVNKHRVIQRAVYEELVNMLSPVEVQPFKPVRGRSNVIMFVGLQGSGKTTTIG 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K+A Y+++KGW+ +VCADTFRAGAFDQLKQNA K K+PFYGSYTESDPV IA +GV F
Sbjct: 121 KFAAYYKRKGWRTCMVCADTFRAGAFDQLKQNAVKVKVPFYGSYTESDPVVIAEQGVSQF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KKE+ ++IIVDTSGRHKQE LFEEM+QV +PD ++FV+DS+IGQAAFDQAQAF+++
Sbjct: 181 KKEHFEIIIVDTSGRHKQEEGLFEEMKQVQSHIHPDNIVFVLDSTIGQAAFDQAQAFQRT 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V +G+VI+TK+DG+AKGGGALSAVAAT +P+IF G+GE D+ E F+ FVSRLLGMGD
Sbjct: 241 VDIGSVIITKLDGNAKGGGALSAVAATGAPIIFTGSGEGFDDLEPFEASSFVSRLLGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
G + ++ E + + ++++ +G FT+R M EQ QN+ K+GP+ +V SM+PG
Sbjct: 301 VKGLVREMKEGGMLKVNEDTMKRIQKGKFTIRDMGEQLQNVAKLGPLDRVMSMIPGLPQG 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
++P+G EKE ++KR M +M+SMT+ ELD M++ R+ R G+G E +
Sbjct: 361 MLPQGMEKEGGERMKRMMILMNSMTDAELDGEVE--MDEKRLRRCCIGAGLLPEEGAMFM 418
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEM-SALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQNL 476
++YK + ++ KM + + +M + RN A Q + K + ML Q+GG L ++
Sbjct: 419 QQYKAMEQMIGKMGKSPLMRDEKMLQQMQRNPQAVMQQLQKTMNPQMLAQMGGAKNLMSM 478
Query: 477 MKQ--MGSTKDMMGMF 490
MK M + K MMG F
Sbjct: 479 MKNIDMNAMKKMMGQF 494
>gi|24473790|gb|AAL55410.1| SRP54-like protein [Leishmania major]
Length = 487
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/473 (52%), Positives = 334/473 (70%), Gaps = 9/473 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I +AI +MS +++ E + E +NEI RALLQADV +V+++Q +I+ +
Sbjct: 1 MVLAELGQKIGQAIHRMSAKSMLGEDDVKELMNEIARALLQADVNVTIVKKLQVSIRTEL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + AG NKR+I+Q A+FN L ++LDPG F P KG+ +V+MFVGLQGSGKTT+CTK
Sbjct: 61 ALAEEGAGLNKRKILQNAVFNGLKRILDPGVKPFLPVKGRHNVVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K ALVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAAYFQRKGFKTALVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVAIAKEGVAELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQE+ALFEEM+QV EA P+ ++FVM ++ GQA +QA+ FK+ V
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVEEAVKPNDIVFVMSATDGQAVEEQARNFKEMV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+VIVTK+D KGGGALSAVAAT+SP++FIGTGEH ++F++F+ + FV ++LGMGD
Sbjct: 241 AVGSVIVTKLDCQTKGGGALSAVAATRSPIVFIGTGEHFEDFDLFNPERFVQKMLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G MD + + +D E+ ++L +G FT+R MYE QN+LKMG +G++ MLPG S
Sbjct: 301 GGLMDTMRD-ANIDGNEEVYKRLQDGLFTMRDMYEHLQNVLKMGSVGKIMEMLPGMSGHA 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEML 419
G++ + +K ++ M+DSMT ELD K+M SR+ RIARGSG V EV ++
Sbjct: 360 ATAGQQGD--IALKGFIHMLDSMTVAELDEVRVKKMMTPSRMHRIARGSGHSVVEVQNLI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSA--LSRNMNAQHM---SKVLPQGMLKQI 467
Y + +I KM + + S+ + +M Q M +K+L ML+QI
Sbjct: 418 ISYTKFEEIVKKMGKMNFKAMMQDSSGPAAGHMGQQQMGQLAKLLNPNMLRQI 470
>gi|328772629|gb|EGF82667.1| hypothetical protein BATDEDRAFT_86146 [Batrachochytrium
dendrobatidis JAM81]
Length = 565
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 237/453 (52%), Positives = 336/453 (74%), Gaps = 20/453 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ ++ AT+IDE+ L L EI ALL++DV +LV+ ++ NIK IV
Sbjct: 1 MVLAELGKRINTALKTLTTATVIDEEALEAILKEICGALLESDVNVRLVQSLRKNIKSIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGK--PSFTPKKGKPSVIMFVGLQGSGKTTTC 118
NL +L++G NK+RIIQ+AIF+ELCK++DPG+ +F P+KGKP+VIMFVGLQGSGKTTTC
Sbjct: 61 NLQELSSGINKKRIIQKAIFDELCKLVDPGQGVVAFKPRKGKPNVIMFVGLQGSGKTTTC 120
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
TK AYY+Q+KG++ LVC DTFRAGAFDQLKQNATKAKIP+YGSYTESDPV++A+EGV+
Sbjct: 121 TKMAYYYQRKGYRTCLVCTDTFRAGAFDQLKQNATKAKIPYYGSYTESDPVQLAMEGVDK 180
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FK E ++IIVDTSGRH+QE LF+EM+Q+S PD V+FV+D +IGQAA A+AF++
Sbjct: 181 FKVEGFEVIIVDTSGRHRQETELFQEMQQISNVIKPDNVVFVLDGTIGQAADAHARAFQE 240
Query: 239 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG-- 296
+V +G++++TKMDGHAKGGGA+SAVAAT SP++FIGTGEH+ + E+F + FV ++LG
Sbjct: 241 TVDIGSIVITKMDGHAKGGGAISAVAATGSPILFIGTGEHIHDLEIFKSQSFVRKMLGSQ 300
Query: 297 -----------MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGP 345
MGD G M+ + ++ + +L++ + +G FTLR M +QF+ + MGP
Sbjct: 301 LLAIDIASKKSMGDIDGLMETVQDMKL--ENTDLMKNIEQGKFTLRSMKQQFELVTSMGP 358
Query: 346 IGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN--DSRIMR 403
I ++ SM+PG E++ + ++ IKR+M + DSMT ELD S+ K+ N +RI R
Sbjct: 359 ISKLASMIPGMPQEMLAQMDGQDGPGLIKRFMCIFDSMTETELD-SDGKVFNVHPTRIYR 417
Query: 404 IARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK 436
+A+GSG V+E+ +L ++K++A + + G K
Sbjct: 418 VAKGSGVTVQEIETLLVQFKQMAGMIKSIGGSK 450
>gi|358060767|dbj|GAA93538.1| hypothetical protein E5Q_00182 [Mixia osmundae IAM 14324]
Length = 523
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/525 (48%), Positives = 351/525 (66%), Gaps = 35/525 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ Q+S A++IDE+VL+ L EI AL +ADV KLV ++ +K V
Sbjct: 1 MVLADLGKRINGALSQLSAASVIDEQVLDSILKEIATALFEADVNVKLVANLRNKVKTKV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS---FTPKKGKPSVIMFVGLQGSGKTTT 117
L + NK+ +IQ+A+F+EL +++DPG + FTPKKG+ +VIMFVGLQG+GKTT+
Sbjct: 61 -APALGSSGNKKSVIQRAVFDELVQLVDPGPEAAAPFTPKKGQSNVIMFVGLQGAGKTTS 119
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTK A +++++G+K LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV I+ +GV
Sbjct: 120 CTKLAIHYKRRGYKTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVVISAQGVH 179
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
F++E D+IIVDTSGRH+QE LFEEM Q+S PD I V+D +IGQAA Q++AFK
Sbjct: 180 KFREERFDIIIVDTSGRHRQETELFEEMMQISRQVKPDQTIMVLDGAIGQAAESQSRAFK 239
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
++ GA+IVTKMDGHAKGGGA+SAVAATK+P+IFIGTGEH+ + E F +PF+S++LGM
Sbjct: 240 EAADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFIGTGEHLHDLEKFSPEPFISKMLGM 299
Query: 298 GDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 355
GD G M+ + EV +Q+ E+L+KL G FT+R + +Q NI+ MGP+ ++ M+PG
Sbjct: 300 GDMQGLMETVQEVHQNNPNQRAEMLKKLEAGVFTVRDLKDQMSNIMSMGPLSKIAQMIPG 359
Query: 356 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDS---------------- 399
L + E S IKR M + D+MT EEL+S KL + S
Sbjct: 360 MGDMLGGENSEAASHT-IKRMMYIFDAMTAEELESDG-KLFHTSPTNTEYREGQLREPNK 417
Query: 400 RIMRIARGSGRQVREVMEMLEEYKRLAKIWSK--------MKGLKIPKKGEMSALSRNMN 451
R++RIARGSG V+E +L +++ A++ K K ++ + G R +
Sbjct: 418 RVLRIARGSGTSVQECEGLLAQHRMFAEMAKKAGGKGGWMQKAKQMQQGGGALPQGRMPS 477
Query: 452 AQHMSKVLPQGMLKQIGGVGGLQNLMKQMGST---KDMMGMFGGG 493
+S++LP GM +Q+ +GG + +MKQMG ++MM GGG
Sbjct: 478 MDQLSRMLPAGMAEQVRAMGGPEAMMKQMGGMAGLQNMMKGMGGG 522
>gi|157870075|ref|XP_001683588.1| putative signal recognition particle [Leishmania major strain
Friedlin]
gi|68126654|emb|CAJ04436.1| putative signal recognition particle [Leishmania major strain
Friedlin]
Length = 519
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/473 (52%), Positives = 334/473 (70%), Gaps = 9/473 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I +AI +MS +++ E + E +NEI RALLQADV +V+++Q +I+ +
Sbjct: 1 MVLAELGQKIGQAIHRMSAKSMLGEDDVKELMNEIARALLQADVNVTIVKKLQVSIRTEL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + AG NKR+I+Q A+FN L ++LDPG F P KG+ +V+MFVGLQGSGKTT+CTK
Sbjct: 61 ALAEEGAGLNKRKILQNAVFNGLKRILDPGVKPFLPVKGRHNVVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K ALVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAAYFQRKGFKTALVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVAIAKEGVAELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQE+ALFEEM+QV EA P+ ++FVM ++ GQA +QA+ FK+ V
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVEEAVKPNDIVFVMSATDGQAVEEQARNFKEMV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+VIVTK+D KGGGALSAVAAT+SP++FIGTGEH ++F++F+ + FV ++LGMGD
Sbjct: 241 AVGSVIVTKLDCQTKGGGALSAVAATRSPIVFIGTGEHFEDFDLFNPERFVQKMLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G MD + + +D E+ ++L +G FT+R MYE QN+LKMG +G++ MLPG S
Sbjct: 301 GGLMDTMRD-ANIDGNEEVYKRLQDGLFTMRDMYEHLQNVLKMGSVGKIMEMLPGMSGHA 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEML 419
G++ + +K ++ M+DSMT ELD K+M SR+ RIARGSG V EV ++
Sbjct: 360 ATAGQQGD--IALKGFIHMLDSMTVAELDEVRVKKMMTPSRMHRIARGSGHSVVEVQNLI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSA--LSRNMNAQHM---SKVLPQGMLKQI 467
Y + +I KM + + S+ + +M Q M +K+L ML+QI
Sbjct: 418 ISYTKFEEIVKKMGKMNFKAMMQDSSGPAAGHMGQQQMGQLAKLLNPNMLRQI 470
>gi|326519590|dbj|BAK00168.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/336 (69%), Positives = 282/336 (83%), Gaps = 7/336 (2%)
Query: 158 PFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLV 217
P Y +TE DPV+IAVEG+E F++E DLII+DTSGRH QEAALFEEMRQV+EAT PDLV
Sbjct: 7 PRY-PFTE-DPVKIAVEGLEKFRQEKSDLIIIDTSGRHMQEAALFEEMRQVAEATKPDLV 64
Query: 218 IFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGE 277
IFVMD SIGQAAFDQAQAFKQS SVGAVIVTK+DGHAKGGGALSAVAATKSPVIFIGTGE
Sbjct: 65 IFVMDGSIGQAAFDQAQAFKQSASVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 124
Query: 278 HMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQF 337
H+D+F+VF+V+PFV+RLLG GD G +DK+ +VP DQQ EL+ KLSEG FTLR++YEQF
Sbjct: 125 HIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQF 184
Query: 338 QNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN 397
QN+LKMGP+ Q+FSMLPGFSSELMPKG+EK+S+ K KRYMT+MDSMT ELDS+NPKLM
Sbjct: 185 QNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLMT 244
Query: 398 DSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMS 456
+SR +R+ARGSGR++++VMEMLEEYKRLAK+WSK+ K IP G+MSA + Q M
Sbjct: 245 ESRTIRVARGSGRKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMSAQA----IQKML 300
Query: 457 KVLPQGMLKQIGGVGGLQNLMKQMGSTKDMMGMFGG 492
KV+P +++Q+GG GL+ L+KQ+G KD M G
Sbjct: 301 KVMPPQVVQQMGGKSGLEALLKQLGGGKDTSKMLAG 336
>gi|71651473|ref|XP_814414.1| signal recognition particle [Trypanosoma cruzi strain CL Brener]
gi|70879383|gb|EAN92563.1| signal recognition particle, putative [Trypanosoma cruzi]
Length = 487
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/461 (51%), Positives = 320/461 (69%), Gaps = 6/461 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ ++ E + E LNE+ RALLQADV V+E+Q I+ V
Sbjct: 1 MVLAELGQKIGGAISKMSSKPLLGEDDVKEFLNEVARALLQADVHVTTVKELQQTIRAEV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G NKR+++Q A+F+ L K+LDPG F P KGK +++MFVGLQGSGKTT+CTK
Sbjct: 61 AITSEAVGLNKRKMLQTAVFSGLRKILDPGVKPFIPAKGKTNIVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG K ALVCADTFRAGA+DQL+QNATKAKI FYGS TE+DPV IA EGV +
Sbjct: 121 YAAYFQRKGLKTALVCADTFRAGAYDQLRQNATKAKIRFYGSLTEADPVIIAKEGVAELE 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLII+DTSGRHKQE+ALFEEM+QV EA P+ ++FVM ++ GQ +QA+ FK+ V
Sbjct: 181 KEKYDLIIIDTSGRHKQESALFEEMKQVQEAVKPNDIVFVMSATDGQGIREQARQFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGAL+AVA TKSP++FIGTGEH ++FE+F + FVSR+LGMGD
Sbjct: 241 PVGSVIITKLDGHAKGGGALAAVAMTKSPIVFIGTGEHFEDFELFQPESFVSRMLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
MD + + +D EL ++ +G FT+R MYE QN+LKMG + ++ +M+PG S+
Sbjct: 301 RALMDTMKD-ANIDTDSELYRRFQDGQFTMRDMYEHLQNVLKMGSVSKIMNMIPGMSA-- 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEML 419
+ + +K ++ +MDSMT ELD + K M SRI+R+ARGSG + EV ++
Sbjct: 358 LSGAAGELGDVTLKAFIHIMDSMTAAELDDARVKKTMTPSRILRVARGSGHSIHEVHNLI 417
Query: 420 EEYKRLAKIWSKMK--GLKIPKKGEMSALSRNMNAQHMSKV 458
Y + ++ KM K + S LS M Q M+++
Sbjct: 418 TSYTKFEEVVKKMGKMNFKAMSQDPGSMLSGRMGQQQMTQL 458
>gi|330802872|ref|XP_003289436.1| signal recognition particle 54 kDa subunit [Dictyostelium
purpureum]
gi|325080478|gb|EGC34032.1| signal recognition particle 54 kDa subunit [Dictyostelium
purpureum]
Length = 516
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/505 (49%), Positives = 353/505 (69%), Gaps = 39/505 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG +S A++ ++ +TI++E +N L EI AL ++DV L+ +M+ NIK+ V
Sbjct: 1 MVLAELGNQLSAALRNLNESTIVNEDTINTLLKEIGNALSKSDVSMSLIIQMRKNIKEKV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
LD +AAG NKR+II++ +F EL +++DPG P + P KGK +V+MFVGLQG+GKTT+ TK
Sbjct: 61 KLDQIAAGLNKRKIIRKVVFEELIRLVDPGVPLWKPVKGKSNVVMFVGLQGAGKTTSVTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY++KKGW A+VCADTFRAGAFDQ++ NA K KI +YGS TE DPV +A GV+ FK
Sbjct: 121 LAYYYKKKGWSTAIVCADTFRAGAFDQVRHNAAKGKIQYYGSDTEKDPVVVAKAGVDIFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQ++ LFEEM+Q+ A PD VIFVMDSSIGQAA++QA AFK SV
Sbjct: 181 KEGTEIIIVDTSGRHKQDSELFEEMKQIETAVKPDNVIFVMDSSIGQAAYEQATAFKNSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG++I+TKMDG++KGGGALS +AAT SP+IFIGTGEH+ + ++FD + FV++LLG GD
Sbjct: 241 KVGSIIITKMDGNSKGGGALSGIAATGSPIIFIGTGEHLTDLDLFDPETFVNKLLGNGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++KI EV+P D L+++++G FTLR M +QFQ IL++GPI + M+PG S
Sbjct: 301 KGMLEKIKEVIPEDSSS--LKEIAQGKFTLRSMQQQFQQILQLGPIDKFVQMIPGMSQ-- 356
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MP+ + E K+K Y+ ++DS++++ELD P + RI+ IA+G+GR +EV+E+LE
Sbjct: 357 MPQLQGNEGNLKLKAYINILDSLSDKELDGKKP--ITQKRILAIAQGAGRHPKEVLELLE 414
Query: 421 EYKRLAKIWSKMKGLKIPKK-GEMSALSRNMNAQHMSKVLPQGMLKQI------------ 467
++ K++ K+ G K+P G M L +SK P+G L+Q+
Sbjct: 415 QH----KMFEKLIGGKVPGGMGNMGNL--------LSKGGPKG-LQQLQNMMPPQMMKQM 461
Query: 468 ---GGVGGLQNLMKQMGSTKDMMGM 489
GG+ GL N K M DM G+
Sbjct: 462 NAAGGMQGLLNSFKNM----DMSGL 482
>gi|407860349|gb|EKG07361.1| signal recognition particle, putative [Trypanosoma cruzi]
Length = 578
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/461 (52%), Positives = 320/461 (69%), Gaps = 6/461 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ ++ E + E LNE+ RALLQADV V+E+Q I+ V
Sbjct: 92 MVLAELGQKIGGAISKMSSKPLLGEDDVKEFLNEVARALLQADVHVTTVKELQQTIRAEV 151
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G NKR+++Q A+F+ L K+LDPG F P KGK +++MFVGLQGSGKTT+CTK
Sbjct: 152 AITSEAVGLNKRKMLQSAVFSGLKKILDPGVKPFIPAKGKNNIVMFVGLQGSGKTTSCTK 211
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG K ALVCADTFRAGA+DQL+QNATKAKI FYGS TE+DPV IA EGV +
Sbjct: 212 YAAYFQRKGLKTALVCADTFRAGAYDQLRQNATKAKIRFYGSLTEADPVIIAKEGVAELE 271
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLII+DTSGRHKQE+ALFEEM+QV EA P+ ++FVM ++ GQ +QA+ FK+ V
Sbjct: 272 KEKYDLIIIDTSGRHKQESALFEEMKQVQEAVKPNDIVFVMSATDGQGIREQARQFKEKV 331
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VIVTK+DGHAKGGGAL+AVA TKSP++FIGTGEH ++FE+F + FVSR+LGMGD
Sbjct: 332 PVGSVIVTKLDGHAKGGGALAAVAMTKSPIVFIGTGEHFEDFELFQPESFVSRMLGMGDM 391
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
MD + + +D EL ++ +G FT+R MYE QN+LKMG + ++ +M+PG S+
Sbjct: 392 RALMDTMKD-ANIDTDSELYRRFQDGQFTMRDMYEHLQNVLKMGSVSKIMNMIPGMSALS 450
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEML 419
G + +K ++ +MDSMT ELD + K M SRI+R+ARGSG + EV ++
Sbjct: 451 GAAG--ELGDVALKAFIHIMDSMTAAELDDARVKKTMTPSRILRVARGSGHSIHEVHNLI 508
Query: 420 EEYKRLAKIWSKMK--GLKIPKKGEMSALSRNMNAQHMSKV 458
Y + ++ KM K + S LS M Q M+++
Sbjct: 509 TSYTKFEEVVKKMGKMNFKAMSQDPGSMLSGRMGQQQMTQL 549
>gi|392595811|gb|EIW85134.1| signal recognition particle protein [Coniophora puteana RWD-64-598
SS2]
Length = 571
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/513 (47%), Positives = 344/513 (67%), Gaps = 34/513 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++DEKVL+ L EIT ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDATLKEITAALLESDVNVKLVASLRSKVKVKV 60
Query: 61 NLD----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
D A ++ IIQ+A+F+EL ++DPG + PKKG+ +VIM VGLQG+GKTT
Sbjct: 61 KASLESADKAKDVARKNIIQKAVFDELVHLVDPGVEPYKPKKGQTNVIMAVGLQGNGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +GV
Sbjct: 121 TCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVAIAAQGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
FKKE D+IIVDTSGRHKQE+ LF+EM Q+SEA NP++ + V+D+SIGQAA Q+QAF
Sbjct: 181 TKFKKERFDVIIVDTSGRHKQESELFQEMVQISEAVNPNMTVLVLDASIGQAAEAQSQAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K+S GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+G GEH+ + + F +PF+S+LLG
Sbjct: 241 KESADFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGVGEHLYDLDKFSPQPFISKLLG 300
Query: 297 MGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+GD G M+ +H++ D+Q ++ +KL EG ++R EQ QN++ MGPI ++ SM+P
Sbjct: 301 LGDMQGLMEHMHDLAMQNPDKQKDMAKKLEEGKLSIRDWREQIQNVMNMGPISKIASMIP 360
Query: 355 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDS----------RIMRI 404
G EL+ G ++E ++KR + + DSMT EELDS M + R+ R+
Sbjct: 361 GLPQELLA-GSDEEGSLRMKRMIYITDSMTAEELDSDGSMFMEMAKDGKPIGLTWRVTRV 419
Query: 405 ARGSGRQVREVMEMLEEYKRLAKI---------W----SKMKGLKIPKKGEMSALSRNMN 451
ARGSG VREV E+L +Y+ +A + W KM+ + + +
Sbjct: 420 ARGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQAVQKMQQAGGGRGRGANGMPTPAQ 479
Query: 452 AQHMSKVLPQGML----KQIGGVGGLQNLMKQM 480
Q M + +P GM+ +Q+ GLQ++M+ M
Sbjct: 480 IQAMQRAMPPGMMQQMQRQLRSGNGLQDMMRTM 512
>gi|157115970|ref|XP_001652739.1| signal recognition particle 54 kda protein [Aedes aegypti]
gi|108876679|gb|EAT40904.1| AAEL007400-PA [Aedes aegypti]
Length = 357
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/349 (63%), Positives = 279/349 (79%), Gaps = 1/349 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATII+E+VL+ L EI ALL+ADV +LV++++ N+K ++
Sbjct: 1 MVLADLGRKITNALHSLSKATIINEEVLDSMLKEICTALLEADVNIRLVKKLRENVKSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPVKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKKNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE + IIVDTSGRHKQE +LFEEM V+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGFEFIIVDTSGRHKQEESLFEEMLAVATAVKPDNIIFVMDATIGQACEAQAKAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQV 349
G +DK++E + +D EL+ K+ G FT+R MYEQFQNI+KMGP Q+
Sbjct: 301 EGLIDKVNE-LNLDDNEELIDKIKHGQFTIRDMYEQFQNIMKMGPFSQI 348
>gi|345569889|gb|EGX52715.1| hypothetical protein AOL_s00007g498 [Arthrobotrys oligospora ATCC
24927]
Length = 511
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/435 (52%), Positives = 321/435 (73%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+Q ++ + ++DEK + + EI AL++ADV KLV ++ +I++ V
Sbjct: 1 MVLADLGRRINSAVQDLTRSNLVDEKAFDSMIKEIGNALVEADVNVKLVANLRKSIRQTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL G NK+RIIQ+A+F+ELC+++D + PKKGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 NFKDLGQGVNKKRIIQKAVFDELCRLVDSHSEPYKPKKGKTNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++ +G+K LVCADTFRAGAFDQLKQNATKAK+P+YGSYTE+DPV++A GV+ FK
Sbjct: 121 LARWYNARGFKACLVCADTFRAGAFDQLKQNATKAKVPYYGSYTETDPVKVAKAGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF EM Q+ EA PD I V+D+SIGQ A Q++AFK+S
Sbjct: 181 KERFEIIIVDTSGRHRQETELFAEMVQIQEAVRPDQTIMVLDASIGQQAEAQSKAFKESA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+++TK DG+A GGGA+SAVAATK+P++FIGTGEH+ + E F+ + ++S+LLGMGD
Sbjct: 241 DFGAIVITKTDGNAAGGGAISAVAATKTPIVFIGTGEHILDMEKFEPQRYISKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++ + + +DQ+ + ++ ++EG FT+R + +Q NI+KMGP+ ++ M+PG S+ L
Sbjct: 301 QGLVEHVQS-LKLDQK-DTMKHIAEGLFTVRDLRDQLNNIMKMGPLSKMAGMIPGLSN-L 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E K+KR M +MDSMT +ELDS + R+ RIARGSG VREV ++L
Sbjct: 358 MGDVGDEEGSMKLKRMMYIMDSMTTKELDSDGKVFVQQPERMTRIARGSGTSVREVEDVL 417
Query: 420 EEYKRLAKIWSKMKG 434
++K +A++ KMKG
Sbjct: 418 TQHKMMAQMAKKMKG 432
>gi|393245418|gb|EJD52928.1| signal recognition particle protein [Auricularia delicata TFB-10046
SS5]
Length = 567
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/514 (47%), Positives = 344/514 (66%), Gaps = 41/514 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ Q++ A ++DEKVL+ L EI ALL++DV KLV ++++ +K
Sbjct: 1 MVLADLGRKLNNALSQLNRAPVVDEKVLDALLKEICAALLESDVNVKLVSQLRSKVKTKA 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N+R ++ +AIF+EL +++DPG F PKKG+P+VIM VGLQG+GKT
Sbjct: 61 KAAFEAGADKGKETNRRNVVHKAIFDELVQLVDPGVEPFKPKKGQPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+Q++G+K +VCADTFRAGAFDQ +Q+ATKAK+ FYGSYTE+DPV IA +G
Sbjct: 121 TTCTKLAAYYQRRGFKSCIVCADTFRAGAFDQTRQSATKAKVSFYGSYTETDPVAIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE ++IIVDTSGRH+QE+ LF+EM Q+ EA PD+ + V+D+SIGQAA Q++A
Sbjct: 181 VSKFKKERFEVIIVDTSGRHRQESELFQEMVQIGEAVKPDMTVLVLDASIGQAAEAQSRA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+LL
Sbjct: 241 FKESSDFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLTDLDKFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 353
GMGD G M+ +H+V ++Q E+ +K EG ++R EQ QN++ MGPI ++ SM+
Sbjct: 301 GMGDVQGLMEHMHDVAMQNPEKQKEMAKKFEEGKLSIRDWKEQVQNVMSMGPISKIASMI 360
Query: 354 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIMR 403
PG E++ +G +++ ++KR + + DSMT ELDS M R+ R
Sbjct: 361 PGLPQEML-EGSDEDGARRLKRLIFITDSMTATELDSDGSMFMQMGKDGKPTGLTWRVTR 419
Query: 404 IARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSAL----------SRNMNA- 452
+A+GSG VREV E+L +Y+ +A + + G KKG + A R +N
Sbjct: 420 VAKGSGTSVREVEEVLCQYRMMAHMAKQAGG----KKGWLQAAQKMQAAAGGRGRGLNGM 475
Query: 453 ------QHMSKVLPQGMLKQI--GGVGGLQNLMK 478
Q M + +P GM +Q+ GG GG+Q +MK
Sbjct: 476 PSPAQIQAMQRAMPPGMQQQLRQGGFGGIQEMMK 509
>gi|449547302|gb|EMD38270.1| hypothetical protein CERSUDRAFT_113440 [Ceriporiopsis subvermispora
B]
Length = 571
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/514 (46%), Positives = 345/514 (67%), Gaps = 35/514 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++DEKVL+ L E+ ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDALLKEVCAALLESDVNVKLVASLRQKVKAKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
+ D N++ +IQ+A+++EL +++DPG + PKKG+P+VIM VGLQG+GKT
Sbjct: 61 KVALEGGADKGKEVNRKSVIQKAVYDELVQLVDPGVEPYKPKKGQPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K ++VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQKRGFKTSIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVAIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE D+IIVDTSGRHKQE+ LF+EM Q+ +A P++ + ++D+SIGQAA Q++A
Sbjct: 181 VAKFKKERFDVIIVDTSGRHKQESELFQEMVQIGQAVKPNMTVLILDASIGQAAEAQSRA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S GA+IVTKMDGHAKGGGA+SAVA TK+P+IF+G GEH+ + + F +PF+S+LL
Sbjct: 241 FKESADFGAIIVTKMDGHAKGGGAISAVAVTKTPIIFLGVGEHLHDLDRFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 353
G+GD G M+ +H++ D+Q E+ +KL EG ++R EQ QN++ MGPI ++ SM+
Sbjct: 301 GLGDVQGLMEHMHDLATQNPDKQKEIAKKLEEGKLSIRDWREQIQNVMNMGPISKIASMI 360
Query: 354 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIMR 403
PG E+M +G ++ES ++KR + ++DSMT+ ELDS M R+ R
Sbjct: 361 PGLPQEMM-QGSDEESSLRMKRMIYIVDSMTSSELDSDGSPFMEVGKDGKPIGLTWRVTR 419
Query: 404 IARGSGRQVREVMEMLEEYKRLAKI---------W----SKMKGLKIPKKGEMSALSRNM 450
+ARGSG VREV E+L +Y+ +A + W KM+ + + +
Sbjct: 420 VARGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQTIQKMQSAAGGRGRGANGMPTPA 479
Query: 451 NAQHMSKVLPQGML----KQIGGVGGLQNLMKQM 480
Q M + +P GML +Q+ GG+Q +MK M
Sbjct: 480 QIQAMQRAMPPGMLQQMQRQMRSGGGMQEMMKAM 513
>gi|296420065|ref|XP_002839601.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635784|emb|CAZ83792.1| unnamed protein product [Tuber melanosporum]
Length = 546
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/434 (53%), Positives = 321/434 (73%), Gaps = 6/434 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ ++ + ++DEKV + L EI AL++ADV KLV ++ +IK V
Sbjct: 1 MVLADLGKRITSAVSDLARSNVVDEKVFDGMLKEICSALIEADVNVKLVSNLRKSIKHTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKG+ +VIMFVGLQGSGKTTTCTK
Sbjct: 61 NFKELNPNVNKKRLIQKAVFDELVKLVDPHSEPFKPKKGRSNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGSYTE+DPV+++ EGVE FK
Sbjct: 121 LARHYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSYTETDPVKVSREGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF EM Q+ +A PD I V+D+SIGQAA Q++AFK+S
Sbjct: 181 KERFDIIIVDTSGRHQQEKELFAEMVQIQQAVTPDQTIMVLDASIGQAAEAQSKAFKESA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ GA+I+TK DGHA GGGA+SAVAAT++P++FIGTGEHM + E F + FVS+LLGMGD
Sbjct: 241 NFGAIIITKTDGHAAGGGAISAVAATRTPIMFIGTGEHMLDLERFAPQAFVSKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++ + + +DQ+ + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S++
Sbjct: 301 QGLVEHVQS-LKLDQK-DTMKHIQEGIFTVRDLRDQLGNIMKMGPLSKMAGMIPGL-SQM 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND--SRIMRIARGSGRQVREVMEM 418
M ++E K+KR + +MDSMT +ELD S+ K +D +R+ RIA GSG VREV ++
Sbjct: 358 MGDVGDEEGSMKLKRMIYIMDSMTEKELD-SDGKCFSDQPTRMTRIAHGSGTTVREVEDV 416
Query: 419 LEEYKRLAKIWSKM 432
L +++ +A + KM
Sbjct: 417 LTQHRMMAGMAKKM 430
>gi|66819967|ref|XP_643640.1| signal recognition particle 54 kDa subunit [Dictyostelium
discoideum AX4]
gi|75009097|sp|Q75K18.1|SRP54_DICDI RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|60471522|gb|EAL69478.1| signal recognition particle 54 kDa subunit [Dictyostelium
discoideum AX4]
Length = 542
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/500 (48%), Positives = 344/500 (68%), Gaps = 32/500 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG +S A++ ++ TI++E +N+ L E+ AL ++DV L+ +M+ NIK +
Sbjct: 1 MVLADLGNQLSSALRSLNETTIVNEDTINQLLKEVGNALSKSDVSMSLIIQMRKNIKDKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
LD +AAG NKR+II+Q +F+EL ++LDPG P + P KGK +++MFVGLQG+GKTT+ TK
Sbjct: 61 KLDQMAAGLNKRKIIKQVVFDELIRLLDPGVPLWKPTKGKSNIVMFVGLQGAGKTTSVTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY+++KKG+ A+VCADTFRAGAFDQ++ NA KAKI +YGS TE DPV +A GV+ FK
Sbjct: 121 LAYFYKKKGFSTAIVCADTFRAGAFDQVRHNAAKAKIHYYGSETEKDPVVVARTGVDIFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ ++IIVDTSGRHKQ++ LFEEM+Q+ A PD IFVMDSSIGQAA++QA AF+ SV
Sbjct: 181 KDGTEIIIVDTSGRHKQDSELFEEMKQIETAVKPDNCIFVMDSSIGQAAYEQATAFRSSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG++I+TKMDG++ GGGA+SAVAAT +P+IFIGTGEH+ + E+FD FVS+LLG GD
Sbjct: 241 KVGSIIITKMDGNSMGGGAISAVAATNTPIIFIGTGEHLTDLELFDPSTFVSKLLGYGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++KI EV+P D L+++++G FTLR M +QFQ I+++GPI ++ M+PG +
Sbjct: 301 KGMLEKIKEVIPEDSTS--LKEIAQGKFTLRSMQQQFQQIMQLGPIDKLVQMIPGMNQ-- 356
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+P+ + E K+K Y+ ++DS++ +ELD P + RI+ IA+GSGR EV+E+LE
Sbjct: 357 LPQLQGNEGGLKLKAYINILDSLSEKELDGKKP--ITQKRIITIAQGSGRHPNEVVELLE 414
Query: 421 EYKRLAKI----------WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGV 470
++K K+ S M G PK E + + MNA GG+
Sbjct: 415 QHKTFEKLIGKGGPGGGLGSLMAGKGGPKNMEQAM--KQMNAN--------------GGM 458
Query: 471 GGLQNLMKQMGSTKDMMGMF 490
GL N +K MG D+ MF
Sbjct: 459 QGLMNSLKGMGGMGDLAKMF 478
>gi|168008842|ref|XP_001757115.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691613|gb|EDQ77974.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 281
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/267 (85%), Positives = 247/267 (92%), Gaps = 1/267 (0%)
Query: 228 AAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDV 287
AAFDQAQAFKQSV+VGAVIVTKMDGHAKGGGALSAVAATKSP+IFIGTGEHMDEFE F+
Sbjct: 11 AAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPIIFIGTGEHMDEFEAFET 70
Query: 288 KPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIG 347
K FVSRLLGMGDWSGFM+KI + VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGP+
Sbjct: 71 KTFVSRLLGMGDWSGFMEKIQDAVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPLS 130
Query: 348 QVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARG 407
QV SM+PGFS E MPKGREKESQAKIK++ TMMDSMT+EELDS+NPKLM DSRI RIARG
Sbjct: 131 QVMSMIPGFSQEFMPKGREKESQAKIKKFTTMMDSMTDEELDSTNPKLMTDSRIYRIARG 190
Query: 408 SGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
SGR +REV EMLEE+KRLAKIWSKMKGLKIPKKG+MSA+SRNMNAQHMSKVLP MLKQI
Sbjct: 191 SGRGLREVHEMLEEFKRLAKIWSKMKGLKIPKKGDMSAMSRNMNAQHMSKVLPPQMLKQI 250
Query: 468 GGVGGLQNLMKQMGSTKDMMGMFGGGE 494
GG+GGLQ+LMKQM S K+ GMFGGG+
Sbjct: 251 GGIGGLQSLMKQMNS-KEFSGMFGGGD 276
>gi|409045874|gb|EKM55354.1| hypothetical protein PHACADRAFT_255925 [Phanerochaete carnosa
HHB-10118-sp]
Length = 564
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/518 (47%), Positives = 343/518 (66%), Gaps = 43/518 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A I+DEKVL+ L ++ ALL+ DV KLV +++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPIVDEKVLDTLLKDVCAALLETDVNVKLVAQLRQKVKAKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N++ I+Q+AIF+EL +++DPG + PKKG+ +VIM VGLQG+GKT
Sbjct: 61 KASLESGADKGKDVNRKSIVQKAIFDELVQLVDPGVEPYKPKKGQSNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVAIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE D+IIVDTSGRHKQE+ LF+EM Q+ EA P++ I ++D+SIGQAA QA+A
Sbjct: 181 VAKFKKERFDVIIVDTSGRHKQESELFQEMVQIGEAVKPNMTIMILDASIGQAAEAQARA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S + GA+IVTKMDGHAKGGGA+SAVA TK+P+IF+G GEH+ + E F +PF+S+LL
Sbjct: 241 FKESSNFGAIIVTKMDGHAKGGGAISAVAVTKTPIIFLGVGEHLHDLEKFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 353
G+GD G M+ + ++ D+Q E+ +KL EG ++R EQ QN++ MGPI ++ SM+
Sbjct: 301 GLGDVQGLMEHMQDIATQNPDKQKEIAKKLEEGKLSIRDWREQIQNVMSMGPISKIASMI 360
Query: 354 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIMR 403
PG E++ +G ++E ++KR + + DSMT ELDS M SR+ R
Sbjct: 361 PGLPQEIV-QGSDEEGSMRMKRMIYISDSMTAAELDSDGSPFMEFGKDGKPIGLTSRVTR 419
Query: 404 IARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSAL----------SRNMNA- 452
+ARGSG VREV E+L +Y+ +A + + G K G + A R +N
Sbjct: 420 VARGSGTSVREVEELLCQYRMMANMAKQAGG----KNGWLQAAQKMQQAAGGRGRGVNGT 475
Query: 453 ------QHMSKVLPQGMLKQIG----GVGGLQNLMKQM 480
Q M + +P GML+Q+ G GG+Q +MK M
Sbjct: 476 PTPAQIQAMQRAMPPGMLQQLQRTMRGGGGMQEMMKAM 513
>gi|389748926|gb|EIM90103.1| signal recognition particle protein [Stereum hirsutum FP-91666 SS1]
Length = 570
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/518 (46%), Positives = 344/518 (66%), Gaps = 44/518 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A+++D+KVL+ L E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRASLVDDKVLDALLKEVCAALLESDVNVKLVSQLRQKVKAKV 60
Query: 61 NLDDLAAGH-----NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
++G N++ ++Q+AIF+EL ++DPG + P+KG P+VIM VGLQG+GKT
Sbjct: 61 KASLESSGDKVKEVNRKNVVQKAIFDELVNLVDPGVEPYKPRKGHPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A ++QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVHYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVSIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE ++IIVDTSGRHKQE LFEEM Q+ +A PD+ + VMD+SIGQAA Q+ A
Sbjct: 181 VAKFKKEKFEVIIVDTSGRHKQEGELFEEMVQIGKAVKPDMTVLVMDASIGQAAEAQSSA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+GTGEH+ + + F +PF+S+LL
Sbjct: 241 FKESADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGTGEHLTDLDKFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 353
GMGD G M+ + ++ D+Q E+ +KL EG ++R EQ QN++ MGPI ++ SM+
Sbjct: 301 GMGDVQGLMEHMQDLATQNPDRQKEMAKKLEEGKLSIRDWREQIQNVMNMGPISKIASMI 360
Query: 354 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIMR 403
PG +++ G ++E ++KR + + DSMT+ ELDS + R+ R
Sbjct: 361 PGLPQDMLA-GTDEEGSMRMKRMIYITDSMTSAELDSDGSLFLEMGKDGKPVDLTWRVTR 419
Query: 404 IARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSR--------------- 448
+ARGSG VREV E+L +Y+ +A + + G K G +SA+ +
Sbjct: 420 VARGSGTSVREVEELLCQYQMMANMAKQAGG----KNGWLSAMQKMQSAAGGRGRGANGM 475
Query: 449 --NMNAQHMSKVLPQGML----KQIGGVGGLQNLMKQM 480
Q M + +P GML KQ+ G GGLQ +MK +
Sbjct: 476 PTQAQIQAMQRAMPPGMLQNMQKQMRG-GGLQEMMKTL 512
>gi|395333501|gb|EJF65878.1| signal recognition particle protein [Dichomitus squalens LYAD-421
SS1]
Length = 571
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/514 (45%), Positives = 340/514 (66%), Gaps = 35/514 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++D+KVL+ L E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDDKVLDALLKEVCAALLESDVNVKLVAQLRQKVKTKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N+R ++Q+A+F+EL +++DPG + PKKG P+VIM VGLQG+GKT
Sbjct: 61 KAALESGADKGKEQNRRHVVQKAVFDELVQLVDPGVEPYKPKKGHPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+Q++G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQRRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVTIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE D+IIVDTSGRHKQE+ LF EM Q+ EA PD + V+D+SIGQAA QA+A
Sbjct: 181 VAKFKKERFDVIIVDTSGRHKQESELFREMVQIGEAVQPDQTVMVLDASIGQAAEAQARA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S + GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+LL
Sbjct: 241 FKESANFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDKFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 353
G+GD G ++ + ++ D+Q E+ +KL EG ++R EQ QN++ MGP+ ++ SM+
Sbjct: 301 GLGDMQGLVEHMQDIATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPLSKIASMI 360
Query: 354 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIMR 403
PG +L+ +G ++E ++KR + + DSMT ELDS M R+ R
Sbjct: 361 PGLPQDLL-QGSDEEGTLRMKRMIYITDSMTAAELDSDGSMFMEWGKDGKPTGLTWRVQR 419
Query: 404 IARGSGRQVREVMEMLEEYKRLAKI---------W----SKMKGLKIPKKGEMSALSRNM 450
+ARGSG VREV ++L +Y+ +A + W KM+ + + +
Sbjct: 420 VARGSGTSVREVEDLLCQYRMMANMAKQAGGKNGWLQAIQKMQAAAGGRGRGANGMPTPA 479
Query: 451 NAQHMSKVLPQGML----KQIGGVGGLQNLMKQM 480
Q M + +P GML +Q+ G GG+Q +MK M
Sbjct: 480 QIQAMQRAMPPGMLQQLQRQMRGGGGMQEMMKAM 513
>gi|169853092|ref|XP_001833227.1| signal recognition particle protein [Coprinopsis cinerea
okayama7#130]
gi|116505605|gb|EAU88500.1| signal recognition particle protein [Coprinopsis cinerea
okayama7#130]
Length = 574
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/518 (47%), Positives = 345/518 (66%), Gaps = 43/518 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A +IDEKVL+ L EIT ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNSALSSLNRAPVIDEKVLDATLKEITAALLESDVNVKLVASLRQKVKAKV 60
Query: 61 NLDDLAAGH-----NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
G NK+ +IQ+A+F+EL ++DPG + P KG+ +VIM VGLQG+GKT
Sbjct: 61 KAALDGQGEKKEPSNKKHLIQKAVFDELVALVDPGVEPYKPVKGRTNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K A+VCADTFRAGAFDQ +Q+ TKAKI ++GSYTE++PV IA +G
Sbjct: 121 TTCTKLAAYYQKRGFKSAIVCADTFRAGAFDQTRQSCTKAKIAYFGSYTETNPVSIAQQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V+ FKKE +++IVDTSGRHKQE LF EM ++SEA PD+ + V+D+SIGQAA QA+A
Sbjct: 181 VQKFKKERFEVVIVDTSGRHKQERELFGEMIEISEAVKPDMTVLVLDASIGQAAEGQAKA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+LL
Sbjct: 241 FKESADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDRFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 353
G+GD G M+ + ++ D+Q E+ +KL EG ++R EQ QN++ MGPI ++ SM+
Sbjct: 301 GLGDVQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPISKIASMI 360
Query: 354 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSS-NPKLMNDS---------RIMR 403
PG EL+ +G ++E ++KR + + DSMT ELDS +P L+ R+ R
Sbjct: 361 PGLPQELL-QGSDEEGSMRMKRMIYITDSMTASELDSDGSPFLLTGKDGKPTGLTWRVTR 419
Query: 404 IARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSAL----------SRNMNA- 452
+A+GSG VREV E+L +Y+ +A + + G K G +SA+ R +N
Sbjct: 420 VAKGSGTSVREVEELLCQYRMMANMAKQAGG----KNGWLSAMQKMQQAAGGKGRGLNGM 475
Query: 453 ------QHMSKVLPQGML----KQIGGVGGLQNLMKQM 480
Q M + +P GML +Q+ GG+Q +MK M
Sbjct: 476 PTPQQIQAMQRAMPPGMLQQMQRQLRSGGGMQEMMKAM 513
>gi|393216852|gb|EJD02342.1| signal recognition particle protein [Fomitiporia mediterranea
MF3/22]
Length = 578
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/518 (45%), Positives = 346/518 (66%), Gaps = 43/518 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ + A ++D+KV++ L E+ ALL++DV KLV ++++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLRAAPVVDDKVIDALLKEVCAALLESDVNVKLVSQLRSKVKAKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N++ ++Q+AIF+EL +++DPG S+ P+KG P+VIM VGLQG+GKT
Sbjct: 61 KAQFEAGADRGKEQNRKAVVQKAIFDELVQLVDPGVDSYKPRKGHPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A ++QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVHYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVTIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE ++IIVDTSGRHKQE+ LF+EM Q+ EA PD+ + V+D+SIGQAA Q++A
Sbjct: 181 VAKFKKEKFEVIIVDTSGRHKQESELFQEMVQIGEAVKPDMTVLVLDASIGQAAEAQSRA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+LL
Sbjct: 241 FKESADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLTDLDRFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 353
G+GD G M+ +H++ ++Q E+ +KL EG ++R EQ QNI+ MGP+ ++ SM+
Sbjct: 301 GLGDVQGLMEHMHDLANANPEKQKEMAKKLEEGKLSIRDWREQIQNIMNMGPLSKIASMI 360
Query: 354 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIMR 403
PGF +++ +G ++E ++KR + + DSM+ +ELDS + R+ R
Sbjct: 361 PGFPQDML-QGSDEEGTLRMKRMLYITDSMSAQELDSDGSLFLTFGKDGKPDGITWRVTR 419
Query: 404 IARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSR--------------- 448
+ARGSG VREV E+L +Y+ +A + + G K G M A+ +
Sbjct: 420 VARGSGTSVREVEELLCQYRMMANMAKQAGG----KNGWMQAVQKMQAAAGGKGRGAGGM 475
Query: 449 --NMNAQHMSKVLPQGMLKQIG----GVGGLQNLMKQM 480
Q M + +P GM++Q+ G GG+Q +MK M
Sbjct: 476 PSPAQIQAMQRAMPPGMMQQMQRAMRGGGGMQEMMKTM 513
>gi|219121088|ref|XP_002185775.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582624|gb|ACI65245.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 510
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/510 (45%), Positives = 354/510 (69%), Gaps = 32/510 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATI--IDEKVLNECLNEITRALLQADVQFKLVREMQTNIKK 58
MVLA+LGG + +++++ +A+ + EK ++ L+++ RAL++ADV KLV +++ +IK
Sbjct: 1 MVLAELGGKLRDSLRKLQSASTQGVTEKEVDALLSDVARALIEADVNVKLVMQLRASIKG 60
Query: 59 IVNLD---------DLAAGHNKRRIIQQAIFNELCKMLDP--GKPSFTPKKGKPSVIMFV 107
V ++ A + + IQ+A+ +EL +L P + ++T +KGKP+V++FV
Sbjct: 61 KVEDLLDDDDEKQPNVRAQRDLAKTIQRAVVDELVALLSPTYAQKAYTMRKGKPNVVLFV 120
Query: 108 GLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD 167
GLQG+GKTT+ K+A+Y+Q++GWK A+VCADTFRAGAFDQLKQNATK ++PFYGSYTE+D
Sbjct: 121 GLQGAGKTTSIAKFAHYYQRRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEAD 180
Query: 168 PVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQ 227
PV IA +GV F K+ ++IIVDTSGRHKQE+ALF+EM+++SEA PD + VMD++ GQ
Sbjct: 181 PVVIAEDGVRQFVKDRYEVIIVDTSGRHKQESALFDEMQEISEAVRPDNTVLVMDATQGQ 240
Query: 228 AAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDV 287
A +DQA AF +V VGAVIVTK+DGHAKGGGALSAVAAT SP++F+G+GEH D+ + F+
Sbjct: 241 AVYDQALAFHNAVDVGAVIVTKLDGHAKGGGALSAVAATSSPILFLGSGEHFDDLDPFNA 300
Query: 288 KPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIG 347
+ FVS+LLG GD G MD + V Q +L++++S+G FTLR+MY+QF+ ++ MGP+
Sbjct: 301 QSFVSKLLGFGDVRGLMDAMKSVTDSKTQEQLMERMSKGEFTLRMMYQQFEKVMSMGPLN 360
Query: 348 QVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDS-------SNPKLMNDSR 400
++ M+PG L+PKG ++++ +++++M MMDSM N ELD +P++ +SR
Sbjct: 361 KLVGMMPGMPDYLVPKGGDQQATDRLRKFMIMMDSMNNAELDGKIDMHVKDDPQI--ESR 418
Query: 401 IMRIARGSGRQVREVMEMLEEYKRLAKIWSKM-------KGLKIPKKGEMSALSRNMN-- 451
I RIA GSG EV +L +K+ + SKM KG + + + + +N N
Sbjct: 419 IRRIAAGSGSHPNEVKMLLLAHKQFEGMVSKMGKSGLMGKGAQQRQAQLQAQMRKNPNFI 478
Query: 452 AQHMSKVLPQGMLKQIGGVGGLQNLMKQMG 481
Q ++++ P+ ML+Q+GG + +M+QM
Sbjct: 479 NQRLNQMDPR-MLQQMGGRESVMAMMQQMA 507
>gi|336377467|gb|EGO18629.1| hypothetical protein SERLADRAFT_454209 [Serpula lacrymans var.
lacrymans S7.9]
Length = 578
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/516 (46%), Positives = 342/516 (66%), Gaps = 37/516 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A +S AT++DEKVL+ L EIT ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAAFSSLSRATVVDEKVLDATLKEITAALLESDVNVKLVASLRQKVKVKV 60
Query: 61 N--LD----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
LD D + N++ ++Q+A+F+EL ++DPG + PKKG+ +++M VGLQG+GK
Sbjct: 61 KAALDGGSSDKSKEANRKNLVQKAVFDELVHLVDPGVEPYKPKKGQCNILMAVGLQGNGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVVIAAQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GV FKKE ++IIVDTSGRHKQE+ LF EM Q+ EA P + I ++D+SIGQAA Q++
Sbjct: 181 GVAKFKKERFEVIIVDTSGRHKQESELFREMVQIGEAVKPHMTILILDASIGQAAEAQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+L
Sbjct: 241 AFKDSADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDRFSPQPFISKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
LG+GD G M+ + ++ D+Q E+ +KL EG ++R EQ QN++ MGPI ++ SM
Sbjct: 301 LGLGDMQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPISKIASM 360
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDS----------RIM 402
+PG EL+ G ++E ++KR + + DSMT+ ELDS M+ S R+
Sbjct: 361 IPGLPQELL-SGSDEEGSLRMKRMIYITDSMTSTELDSDGAVFMDMSKDGKPVGLTWRVT 419
Query: 403 RIARGSGRQVREVMEMLEEYKRLAKI---------W----SKMKGLKIPKKGEMSALSRN 449
R+A+GSG VREV E+L +Y+ +A + W KM+ + + + +
Sbjct: 420 RVAKGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQAMQKMQSIAGGRGRGANGMPTP 479
Query: 450 MNAQHMSKVLPQGMLKQI-----GGVGGLQNLMKQM 480
Q M + +P G L+Q+ G GG+Q ++K M
Sbjct: 480 AQIQAMQRAMPPGALQQMQRQLRSGGGGMQEMLKAM 515
>gi|340923542|gb|EGS18445.1| hypothetical protein CTHT_0050420 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 514
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/492 (49%), Positives = 342/492 (69%), Gaps = 13/492 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L EI ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPTLDEKTFDLMLKEICTALLEADVNVRLVNQLRKSIRTTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVRLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DPV +A +GVE FK
Sbjct: 121 LARHYQSRGFKSCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPVVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM ++ A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFEVIIVDTSGRHRQESALFQEMVEIQAAIKPDETIMVLDASIGQQAEAQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + F+S+LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATGTPIVFIGTGEHMLDLERFIPRNFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++ + + +DQ+ E ++ +SEG FT+R + +Q QNI+KMGP+ ++ M+PG ++ L
Sbjct: 301 PGLVEHVQS-LKLDQK-ETIKHISEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMAN-L 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M + E K+KR + + DSMT++ELDS ++ +R+ R+ARGSG VREV ++L
Sbjct: 358 MQGMDDAEGSLKLKRMIYICDSMTDKELDSDGKIFIDQPTRMTRVARGSGTTVREVEDLL 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNL-MK 478
+ + +A + KM G + SA++ + AQ ++ M K++ +GGL N M
Sbjct: 418 TQQRMMAGMAKKMGGNMKNIQRAQSAIAGSNKAQQLA-----AMQKRLQSMGGLGNAGMP 472
Query: 479 QMGSTKDMMGMF 490
M S +M MF
Sbjct: 473 DMAS---LMKMF 481
>gi|392558546|gb|EIW51733.1| signal recognition particle protein [Trametes versicolor FP-101664
SS1]
Length = 578
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/518 (45%), Positives = 343/518 (66%), Gaps = 43/518 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A++ID+KVL+ L E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRASVIDDKVLDALLKEVCAALLESDVNVKLVAQLRQKVKAKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N+R ++Q+AIF+EL ++DPG + PKKG+ +VIM VGLQG+GKT
Sbjct: 61 KAAIEGGADKGKEQNRRNVVQKAIFDELVGLVDPGVEPYKPKKGQSNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVSIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE D+IIVDTSGRHKQE+ LF+EM Q+ EA P++ + ++D+SIGQAA QA A
Sbjct: 181 VAKFKKERFDVIIVDTSGRHKQESELFKEMVQIGEAVKPNMTVMILDASIGQAAEAQAHA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S + GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+LL
Sbjct: 241 FKESANFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDKFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 353
GMGD G ++ + ++ D+Q E+ +KL EG ++R EQ QN++ MGP+ ++ SM+
Sbjct: 301 GMGDVQGLVEHMQDMATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPLSKIASMI 360
Query: 354 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDS----------RIMR 403
PG +++ +G ++E ++KR + + DSMT ELDS M + R+ R
Sbjct: 361 PGLPQDML-QGSDEEGSLRMKRMIYITDSMTAAELDSDGALFMEWAKDGKPTGLTWRVTR 419
Query: 404 IARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSR--------------- 448
+ARGSG VREV ++L +Y+ +A + + G K G +SA+ +
Sbjct: 420 VARGSGTSVREVEDLLCQYRMMANMAKQAGG----KNGWLSAMQKMQAAAGGRGRGANGM 475
Query: 449 --NMNAQHMSKVLPQGML----KQIGGVGGLQNLMKQM 480
Q M + +P GML +Q+ GG+Q +MK M
Sbjct: 476 PTQAQIQAMQRAMPPGMLQQMQRQMRSGGGMQEMMKAM 513
>gi|170088384|ref|XP_001875415.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650615|gb|EDR14856.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 543
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/498 (46%), Positives = 334/498 (67%), Gaps = 32/498 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A I+DEKVL+ L EIT ALL++DV K V ++ +K V
Sbjct: 1 MVLADLGRRLNAALSSLNKAPIVDEKVLDATLKEITAALLESDVNVKFVASLRQKVKAKV 60
Query: 61 --NLDDLAAGH----NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
++ AA N++ +IQ+A+F+EL ++DPG + PKKG+P+VIM VGLQG+GK
Sbjct: 61 KATIESAAADKSKETNRKNLIQKAVFDELVALVDPGVEPYKPKKGQPNVIMAVGLQGNGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++QK+G+K A+VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVHYQKRGFKSAIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVSIAAQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GV FKKE D+IIVDTSGRHKQE+ LFEEM Q+ EA PD+ + ++D+SIGQAA Q++
Sbjct: 181 GVAKFKKERFDVIIVDTSGRHKQESELFEEMVQIGEAVKPDMTVLILDASIGQAAEAQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK+S + GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+L
Sbjct: 241 AFKESANFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDRFSPQPFISKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
LG+GD G M+ + ++ D+Q E+ +KL EG ++R EQ N++ MGPI ++ SM
Sbjct: 301 LGLGDMQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIRDWREQISNVMNMGPISKIASM 360
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIM 402
+PG +++ +G ++E ++KR + + DSMT ELDS M R+
Sbjct: 361 IPGLPQDML-QGSDEEGSLRMKRMIYITDSMTAGELDSDGAPFMEVGKDGKPVGLTWRVT 419
Query: 403 RIARGSGRQVREVMEMLEEYKRLAKI---------W----SKMKGLKIPKKGEMSALSRN 449
R+A+GSG VREV E+L +Y+ +A + W KM+ K +
Sbjct: 420 RVAKGSGTSVREVEELLCQYRMMATMAKQAGGKNGWLQAMQKMQSAAGGKGRGAGGMPTP 479
Query: 450 MNAQHMSKVLPQGMLKQI 467
Q M + +P GML+Q+
Sbjct: 480 AQIQAMQRSMPPGMLQQM 497
>gi|302691416|ref|XP_003035387.1| hypothetical protein SCHCODRAFT_74858 [Schizophyllum commune H4-8]
gi|300109083|gb|EFJ00485.1| hypothetical protein SCHCODRAFT_74858 [Schizophyllum commune H4-8]
Length = 573
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/525 (46%), Positives = 347/525 (66%), Gaps = 40/525 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQ----TNI 56
MVLA LG ++ A+ ++ A ++DEKVL+ L EIT ALL++DV KLV ++ T +
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDATLKEITAALLESDVNVKLVASLRSKVKTKV 60
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
K I D N++ +IQ+A+F+EL ++DPG + PKKG +VIM VGLQG+GKTT
Sbjct: 61 KAIFEGGDKTKDVNRKNVIQKAVFDELVALVDPGVEPYKPKKGHTNVIMAVGLQGNGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTK A ++QK+G+K A+VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +GV
Sbjct: 121 TCTKLAVHYQKRGFKSAIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVSIAAQGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
FKKE ++IIVDTSGRHKQE LFEEM + +A PD+ I V+D+SIGQAA QA+AF
Sbjct: 181 AKFKKERFEVIIVDTSGRHKQEQELFEEMILIGQAVKPDMTILVLDASIGQAAEAQARAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K S GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+G GEH+ + + F +PF+S+LLG
Sbjct: 241 KDSADFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGVGEHLHDLDRFAPQPFISKLLG 300
Query: 297 MGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+GD G ++ +H++ D+Q E+ +K +G ++R EQ N++ MGPI ++ SM+P
Sbjct: 301 LGDMQGLIEHMHDLTAQNPDKQKEMAKKFEQGKLSIRDWREQISNVMSMGPISKIASMIP 360
Query: 355 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIMRI 404
G +E++ +G ++E ++KR + + DSMT ELDS M R+ R+
Sbjct: 361 GLPAEML-QGSDEEGSLRMKRMIYITDSMTAAELDSDGSMFMEWGKDGKPTGLTWRVTRV 419
Query: 405 ARGSGRQVREVMEMLEEYKRLAKIWSKMKG----LKIPKKGEMSALSRNMNA-------- 452
A+GSG V+EV E+L +Y+ +A + + G L+ +K + A S+ + A
Sbjct: 420 AKGSGTSVKEVEELLCQYRMMANMAKQAGGKNGWLQTMQKIQSVAGSKGLGANGMPTPAQ 479
Query: 453 -QHMSKVLPQGML----KQIGGVGGLQNLMKQMGSTKDMMGMFGG 492
Q + + +P GML KQ+ G GG+Q +MK MMG GG
Sbjct: 480 IQAIQRSMPPGMLQQMRKQMQGGGGMQEMMKA------MMGQGGG 518
>gi|290977140|ref|XP_002671296.1| predicted protein [Naegleria gruberi]
gi|284084864|gb|EFC38552.1| predicted protein [Naegleria gruberi]
Length = 454
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/474 (49%), Positives = 324/474 (68%), Gaps = 28/474 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ +++ +ID+ ++E L EI +L+ ADV + V +++ IK +
Sbjct: 1 MVLAELGSRITTALRTINSQAVIDDAAISELLKEIGNSLMAADVNIQQVIQLRNGIKAGL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ + L G N+R I+ ++ EL +GLQG+GKTTTCTK
Sbjct: 61 DFEKLPKGINRRNHIKAVVYQEL--------------------FFEIGLQGAGKTTTCTK 100
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y+QKKG++ ALVCADTFRAGA +QL+QNA K +I FYG E++PV+IA +GVE FK
Sbjct: 101 YARYYQKKGFRSALVCADTFRAGALEQLRQNAAKVQIAFYGDEYETNPVKIAKDGVEQFK 160
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E ++IIVDTSGRH QE +LFEEM QVS+A NPD VIFVMDSSIGQ+ +QA AFK V
Sbjct: 161 NEKYEVIIVDTSGRHMQEESLFEEMEQVSQAVNPDEVIFVMDSSIGQSVKEQAAAFKSRV 220
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVG+VIVTK+DGHAKGGGALSAVAATKSP+ FIGTGE D F+ F+ + FVSRLLG GD
Sbjct: 221 SVGSVIVTKLDGHAKGGGALSAVAATKSPITFIGTGEDFDNFQQFNAESFVSRLLGQGDL 280
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+ + E V +QP++ +++G +T+R M E F +I+KMGP+ QV SM+PGFS +L
Sbjct: 281 KTLLTTVQEAVDPTKQPQMFDNIAKGIYTIRDMREHFTSIMKMGPLSQVMSMIPGFSEQL 340
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMN-DSRIMRIARGSGRQVREVMEM 418
+PKG E+ES A++K+Y+T+MDSM + E+D ++ KL N SRIMRIARGSGR ++V E+
Sbjct: 341 LPKGSEQESNARLKKYLTIMDSMNDTEMDCTDITKLPNMQSRIMRIARGSGRTPKDVQEL 400
Query: 419 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGG 472
LE++K + ++K L ++ + + Q +SK LP + +G + G
Sbjct: 401 LEQFKVFQSMIGRVKDLN------LANMKSPKDLQKLSKNLPNTLKGDLGSMFG 448
>gi|118355606|ref|XP_001011062.1| SRP54-type protein, GTPase domain containing protein [Tetrahymena
thermophila]
gi|89292829|gb|EAR90817.1| SRP54-type protein, GTPase domain containing protein [Tetrahymena
thermophila SB210]
Length = 460
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/432 (50%), Positives = 315/432 (72%), Gaps = 4/432 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ D+++LN+ L +I ALLQ+D+ K V+++ NI +
Sbjct: 1 MVLNDLGKKINDALSNLNKDYHFDKQLLNKVLKDIQLALLQSDINVKYVKQLSDNILQKC 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N ++ NK+++IQQ + EL KMLDP K F+ K GKP+V+MFVGLQG+GKTTTC K
Sbjct: 61 N--NIEEAVNKKKLIQQLVVQELTKMLDPKKQPFSLKSGKPNVVMFVGLQGAGKTTTCAK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y +KKGW+ L+CADTFRAGAFDQL+Q ATK +IPFYG+ TE+DPV IA+EGV+TF+
Sbjct: 119 YANYWKKKGWRTCLICADTFRAGAFDQLQQIATKIRIPFYGNRTETDPVAIAIEGVKTFQ 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+N ++II+DTSGRH QE+ LF+EM+Q+ A P+ IFVMD S GQA +QAQAFK++V
Sbjct: 179 KQNFEVIIIDTSGRHMQESELFDEMKQIYSAVCPNECIFVMDGSNGQACLNQAQAFKKAV 238
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGH+KGGGALSAVAAT+SP+IF+GTGEH D+ E F + FV RLLG+GD+
Sbjct: 239 DVGSVIITKLDGHSKGGGALSAVAATESPIIFLGTGEHFDDLETFKAESFVKRLLGLGDF 298
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++ + EV+ ++ Q + ++++++G FTLR + + +++ILKMG + Q SM+PG + +
Sbjct: 299 KGMIETVSEVIDLESQQQNIKQIAKGQFTLRALQQNYKSILKMGSLNQFMSMIPGMQNII 358
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ EKE KIK+ +T+MDSM+N+ELD + ++ RI++GSG+ + V +++
Sbjct: 359 QGQISEKEQINKIKKSLTIMDSMSNDELDGITQ--ITQKQLFRISKGSGQPIENVKLLID 416
Query: 421 EYKRLAKIWSKM 432
E K AK K+
Sbjct: 417 EQKTFAKTLKKI 428
>gi|346321519|gb|EGX91118.1| signal recognition particle 54 kDa protein [Cordyceps militaris
CM01]
Length = 536
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/435 (51%), Positives = 315/435 (72%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + + EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINSAVTNLTREQNLDEKAFDAMIKEICSALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +D+ NK+R+IQ+A+F+EL K++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFNDIPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 121 LARHYQTRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVEQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE+ALF+EM + EA PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFDIIIVDTSGRHRQESALFQEMVDIQEAIKPDETIMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + + ++QQ + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S+ +
Sbjct: 301 AGLVEHVQS-LNLNQQ-DTMKNIQEGIFTIRNLRDQLSNIMKMGPLSKMAGMIPGMSN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E AK+KR + + DSMT +ELDS L++ +R+ RIARGSG VRE+ ++L
Sbjct: 358 MQGMDDEEGGAKLKRMIYICDSMTEKELDSDGKILIDQPTRMTRIARGSGTSVREIEDLL 417
Query: 420 EEYKRLAKIWSKMKG 434
+ + +A + KM G
Sbjct: 418 TQQRMMAGMVKKMGG 432
>gi|401882649|gb|EJT46899.1| signal recognition particle 54 kDa protein [Trichosporon asahii
var. asahii CBS 2479]
Length = 566
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/506 (47%), Positives = 340/506 (67%), Gaps = 39/506 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ Q S + +DE ++ + E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGARLHGALNQFSKTSSVDETAIDALVKELCAALLESDVNVKLVSQLRAKVKAKV 60
Query: 61 --NLDDL--AAGH--NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
NL+D A G NK+ +Q+A+F+EL ++DPG + P KGK +VIM VG+QG+GK
Sbjct: 61 KRNLEDAEKAGGREVNKKNAVQKAVFDELVALVDPGTEPYKPVKGKVNVIMAVGIQGAGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPF+GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFFGSYTETDPVTIAYQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GVE F+KE D+IIVDTSGRHKQE+ LFEEM +S+A PD+ + V+D+SIGQAA Q++
Sbjct: 181 GVEKFRKERFDVIIVDTSGRHKQESELFEEMVSISKAVKPDMTVMVLDASIGQAAEGQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S G++IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEH+++ E F +PF+S+L
Sbjct: 241 AFKDSSDFGSIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHLNDLEKFAPQPFISKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
LGMGD G M+ + ++ D Q +L +KL EG FT+R +Q NI+ MG + ++ SM
Sbjct: 301 LGMGDIQGLMEHMQDMARANPDGQKDLAKKLGEGKFTIRDWKDQLSNIMNMGSLSKIASM 360
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQV 412
+PG S +M +G E+E+ AK+KR + + D+M +ELDS D I R+A+GSG V
Sbjct: 361 VPGMSG-MMEQGGEEEAAAKLKRMIFITDAMRTDELDS-------DGLIFRVAQGSGTSV 412
Query: 413 REVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-----------------QHM 455
REV E+L + + +A + + G + G MSA+ + A Q M
Sbjct: 413 REVEELLAQARMMAGMARQAGG----QNGWMSAMQKMQAAAGGKPLGPNGMPSQQQIQAM 468
Query: 456 SKVLPQGMLKQI--GGVGGLQNLMKQ 479
+P +LK++ G GG Q +M +
Sbjct: 469 RNAMPPELLKKLRAAGPGGAQKMMAE 494
>gi|400597588|gb|EJP65318.1| signal recognition particle protein SRP54 [Beauveria bassiana ARSEF
2860]
Length = 529
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/435 (51%), Positives = 314/435 (72%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + + EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINSAVTNLTREQNLDEKAFDAMIKEICAALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N D+ NK+R+IQ+A+F+EL K++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDIPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 121 LARHYQTRGFRSCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVEQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE+ALF+EM + EA PD + V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFDIIIVDTSGRHRQESALFQEMVDIQEAIKPDETVMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + + ++QQ + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S+ +
Sbjct: 301 AGLVEHVQS-LNLNQQ-DTMKNIQEGIFTIRNLRDQLSNIMKMGPLSKMAGMIPGMSN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E AK+KR + + DSMT +ELDS L+ + +R+ RIARGSG VRE+ ++L
Sbjct: 358 MQGMDDEEGGAKLKRMIYICDSMTEKELDSDGKILIEEPTRMTRIARGSGTSVREIEDLL 417
Query: 420 EEYKRLAKIWSKMKG 434
+ + +A + KM G
Sbjct: 418 TQQRMMAGMVKKMGG 432
>gi|408393475|gb|EKJ72739.1| hypothetical protein FPSE_07139 [Fusarium pseudograminearum CS3096]
Length = 528
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/435 (52%), Positives = 312/435 (71%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV KLV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTNLTREQNLDEKAFDGMLKEICAALLEADVNVKLVGQLRKSIKTTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFRPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GV+ FK
Sbjct: 121 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAEVARAGVDQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM + EA PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQESALFQEMVDIQEAIKPDETIMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDFEKFAPQQFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G M+ + + Q + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S+ +
Sbjct: 301 AGLMEHVQSLNL--NQKDTIKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E AK+KR + + DSMT++ELDS L++ +R+ RIARGSG VREV ++L
Sbjct: 358 MQGMDDEEGGAKLKRMIYICDSMTDKELDSDGKILIDQPTRMTRIARGSGTSVREVEDLL 417
Query: 420 EEYKRLAKIWSKMKG 434
+ + +A + KM G
Sbjct: 418 TQQRMMAGMAKKMGG 432
>gi|388581255|gb|EIM21564.1| signal recognition particle protein [Wallemia sebi CBS 633.66]
Length = 561
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/497 (47%), Positives = 337/497 (67%), Gaps = 19/497 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ + + +IDEK L+ L EI++ALL++D+ KLV ++ +K
Sbjct: 1 MVLAGLGRQLNSALNSFNKSQVIDEKTLDGLLKEISKALLESDINVKLVGNLRNRVKTRA 60
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTT 117
D A+G+ +++I+Q+AIF+EL ++DP + + P KGK ++IM VGLQG+GKTT+
Sbjct: 61 LKEFKDTNASGNQQKQIVQKAIFDELVALVDPQEEPYKPTKGKTNIIMAVGLQGAGKTTS 120
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTK A ++Q+KG+K LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV I+ GV+
Sbjct: 121 CTKLAVHYQRKGFKVGLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVVISEAGVQ 180
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
FKK D+IIVDTSGRHKQE LFEEMR +S+A P + + VMD ++GQAA QA AFK
Sbjct: 181 QFKKSKFDVIIVDTSGRHKQEEDLFEEMRMISQAVKPHMTVLVMDGAMGQAAESQASAFK 240
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IFIGTGE++ + + F +PFV +LLGM
Sbjct: 241 ESSDFGAIIVTKMDGHAKGGGAISAVAATKTPIIFIGTGENLHDIDTFRPRPFVQQLLGM 300
Query: 298 GDWSGFMDKIHEVV--PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 355
GD G ++ + +V D+Q EL +K +G+ ++R EQ +N+ K+GPI ++ M+PG
Sbjct: 301 GDMQGLLEHVQDVAMSDPDKQKELAKKFEQGSLSIRDWAEQIKNVTKLGPISKIAGMIPG 360
Query: 356 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIMRIA 405
+++++ +G + E+ +IKR + + DSMT +ELDS+ + R +R+A
Sbjct: 361 LNADMIGQGGDDEASKRIKRMLFITDSMTEKELDSNGTIFLRKGKDGKFVGMSRRALRVA 420
Query: 406 RGSGRQVREVMEMLEEYKRL-AKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGML 464
RGSG VREV E+L +Y + + I + MKG K + Q M K++P +L
Sbjct: 421 RGSGTSVREVEELLVQYTMMKSGILNMMKGQAGGMKPGQPGMPSRDQIQQMQKMMPPQLL 480
Query: 465 KQIGGVGG---LQNLMK 478
+++ GG LQ L +
Sbjct: 481 QKLRSGGGPEILQQLQR 497
>gi|390597902|gb|EIN07301.1| signal recognition particle protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 562
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/512 (46%), Positives = 339/512 (66%), Gaps = 33/512 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ +S A ++DEKVL+ L +I ALL++DV KLV ++++ ++ V
Sbjct: 1 MVLADLGRKLNAALSSLSRAPVVDEKVLDATLKDICAALLESDVNVKLVSQLRSKVRAKV 60
Query: 61 NLD----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
D N+R ++Q+A+F+EL ++DPG + PKKG+ +VIM VGLQG+GKTT
Sbjct: 61 KASLESGDKVKDQNRRTVLQKAVFDELVNLVDPGVEPYKPKKGQSNVIMAVGLQGNGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTK A ++QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +GV
Sbjct: 121 TCTKLAVHYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVAIAAQGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
FKKE ++IIVDTSGRHKQE+ LF+EM Q+ EA P++ I V+D+SIGQAA QA+AF
Sbjct: 181 TKFKKERFEVIIVDTSGRHKQESELFQEMVQIGEAVKPNMTILVLDASIGQAAEAQARAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+LLG
Sbjct: 241 KDSADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLADLDRFSPQPFISKLLG 300
Query: 297 MGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+GD G M+ + ++ D+Q E+ +KL EG ++R EQ NI+ MGPI ++ SM+P
Sbjct: 301 LGDMQGLMEHMQDLAQANPDKQKEIAKKLEEGKLSIRDWREQISNIMNMGPISKIASMIP 360
Query: 355 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIMRI 404
G E++ G E E ++KR + + DSMT ELDS M R+ R+
Sbjct: 361 GIPQEMLAGGDE-EGTNRMKRMIFITDSMTASELDSDGSPFMEFGKDGKPVGITWRVTRV 419
Query: 405 ARGSGRQVREVMEMLEEYKRLAKIWSKMKG----LKIPKKGEMSA--LSRNMNA------ 452
ARGSG VREV E+L +Y+ +A + + G L+ +K + +A R N
Sbjct: 420 ARGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQTMQKMQQAAGGKGRGPNGMPTPAQ 479
Query: 453 -QHMSKVLPQGMLKQIG---GVGGLQNLMKQM 480
Q M + +P GML+Q+ GG+ +MK M
Sbjct: 480 IQAMQRSMPPGMLQQMQRQMRSGGMAEMMKAM 511
>gi|392574127|gb|EIW67264.1| hypothetical protein TREMEDRAFT_72197 [Tremella mesenterica DSM
1558]
Length = 584
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/518 (46%), Positives = 348/518 (67%), Gaps = 44/518 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ Q+S A ++D++VL+ L E+T ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGARLHGALSQLSRAPVVDDQVLDALLKELTAALLESDVNVKLVASLRNKVKTKV 60
Query: 61 --NLDDLAAGH----NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
+L++ AA N++ ++Q+A+F+EL ++DPG + P KGK +V+M VG+QG+GK
Sbjct: 61 KKSLEESAAAGGREVNRKNVVQKAVFDELVALVDPGVEPYKPIKGKANVLMAVGIQGAGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV IA
Sbjct: 121 TTTCTKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVAIASL 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GVE F+KE ++IIVDTSGRHKQE+ LFEEM +S A PD+ I V+D+SIGQAA Q++
Sbjct: 181 GVEKFRKERFEVIIVDTSGRHKQESELFEEMVAISNAVKPDMTIMVLDASIGQAAEGQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEHM++ E F +PFVS+L
Sbjct: 241 AFKDSADFGAIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHMNDLERFAPQPFVSKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
LGMGD G M+ + ++ ++Q E+ +KL +G F+LR EQ +I+ MG + ++ SM
Sbjct: 301 LGMGDMQGLMEHMQDMARANPERQKEMAKKLEQGKFSLRDWREQLSSIMNMGSLSKIASM 360
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSS-----------NPKLMNDSRI 401
+PG + +M G E+E+ K+KR M + D+M +ELDS +P +N R
Sbjct: 361 IPGLPAGVM-DGSEEEATMKMKRLMFITDAMRQDELDSDGLIFFSFDKAGHPVGLN-RRA 418
Query: 402 MRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--------- 452
R+ARGSG +REV E+L + + +A + + G + G MSA+ + A
Sbjct: 419 RRVARGSGTSLREVEELLAQARMMAGMARQAGG----QNGWMSAMQKMQAAAGGKPLGPN 474
Query: 453 --------QHMSKVLPQGMLKQIGGVG--GLQNLMKQM 480
+ M + +P M++++ +G G Q +M++M
Sbjct: 475 GQPSPAQIEAMRRAMPPEMMRKLRSMGPHGAQKMMQEM 512
>gi|322695331|gb|EFY87141.1| signal recognition particle 54 kDa protein [Metarhizium acridum
CQMa 102]
Length = 522
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/435 (51%), Positives = 310/435 (71%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV KLV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTNLTRDQNLDEKAFDNMLKEICSALLEADVNVKLVMQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+A+F+EL +++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLPPAVNKKRLIQKAVFDELVQLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GV+ FK
Sbjct: 121 LARHYQTRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVDQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE+ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFDVIIVDTSGRHRQESALFQEMIDIQTAIRPDETIMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + + Q + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S+ +
Sbjct: 301 AGLVEHVQSLNL--NQKDTIKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E AK+KR + + DSMT++ELDS L+ +R+ RIARGSG VREV ++L
Sbjct: 358 MQGMDDEEGSAKLKRMIYICDSMTDKELDSDGKILIEQPTRMTRIARGSGTSVREVEDLL 417
Query: 420 EEYKRLAKIWSKMKG 434
+ + +A + KM G
Sbjct: 418 TQQRMMAGMAKKMGG 432
>gi|116200506|ref|XP_001226065.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88175512|gb|EAQ82980.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 512
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/436 (51%), Positives = 316/436 (72%), Gaps = 6/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L I ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVNDLTRAPNLDEKTFDSMLKTICSALLEADVNVRLVGQLRKSIRSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+A+++EL ++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLPPAVNKKRLIQKAVYDELVSLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGVE FK
Sbjct: 121 LARHYQSRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPTVVAREGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQESALFQEMTDIQTAIKPDETIMVLDASIGQQAEAQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + F+S+LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIVFIGTGEHMFDFERFVPRSFISKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + + +DQ+ E ++ +SEG FT+R + +Q QNI+KMGP+ ++ SM+PG + +
Sbjct: 301 AGLVEHVQS-LKLDQK-ETIKHISEGVFTVRDLRDQLQNIMKMGPLSKMASMIPGMGN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND--SRIMRIARGSGRQVREVMEM 418
+ + E K+KR + + DSMT++ELD S+ KL + +R+ R+ARGSG VREV ++
Sbjct: 358 LQGMDDDEGSLKLKRMIYICDSMTDKELD-SDGKLFTEQPTRMTRVARGSGTTVREVEDL 416
Query: 419 LEEYKRLAKIWSKMKG 434
L + + +A + KM G
Sbjct: 417 LTQQRMMAGMAKKMGG 432
>gi|322712654|gb|EFZ04227.1| signal recognition particle 54 kDa protein [Metarhizium anisopliae
ARSEF 23]
Length = 522
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/435 (51%), Positives = 310/435 (71%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV KLV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTNLTRDQNLDEKAFDNMLKEICAALLEADVNVKLVMQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+A+F+EL +++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLPPAVNKKRLIQKAVFDELVQLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GV+ FK
Sbjct: 121 LARHYQTRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVDQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE+ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFDVIIVDTSGRHRQESALFQEMIDIQTAIRPDETIMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + + Q + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S+ +
Sbjct: 301 AGLVEHVQSLNL--NQKDTIKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E AK+KR + + DSMT++ELDS L+ +R+ RIARGSG VREV ++L
Sbjct: 358 MQGMDDEEGSAKLKRMIYICDSMTDKELDSDGKILIEQPTRMTRIARGSGTSVREVEDLL 417
Query: 420 EEYKRLAKIWSKMKG 434
+ + +A + KM G
Sbjct: 418 TQQRMMAGMAKKMGG 432
>gi|367023521|ref|XP_003661045.1| hypothetical protein MYCTH_2299988 [Myceliophthora thermophila ATCC
42464]
gi|347008313|gb|AEO55800.1| hypothetical protein MYCTH_2299988 [Myceliophthora thermophila ATCC
42464]
Length = 519
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/457 (49%), Positives = 324/457 (70%), Gaps = 4/457 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L +I ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKAFDSMLKQICSALLEADVNVRLVGQLRKSIRSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVRLVDPHAEPFRPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y+Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A +GVE FK
Sbjct: 121 LARYYQSRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQESALFQEMVDIQAAIKPDETIMVLDASIGQQAEAQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + F+S+LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIVFIGTGEHMLDLERFVPRNFISKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + + +DQ+ E ++ +SEG FT+R + +Q QNI+KMGP+ ++ M+PG S+ +
Sbjct: 301 AGLVEHVQS-LKLDQK-ETIKHISEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMSN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E K+KR + + DSMT++ELDS + +R+ R+ARGSG VREV ++L
Sbjct: 358 MQGMDDEEGSLKLKRMIYICDSMTDKELDSDGKIFIEQPTRMTRVARGSGTTVREVEDLL 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMS 456
+ + +A + KM G + SA++ AQ ++
Sbjct: 418 TQQRMMAGMAKKMGGNMKNMQRAQSAMAGGNKAQQLA 454
>gi|320587877|gb|EFX00352.1| signal recognition particle protein srp54 [Grosmannia clavigera
kw1407]
Length = 530
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/435 (51%), Positives = 318/435 (73%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A IDEK + L EI AL++ADV KLV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNIDEKAFDSMLKEIGNALVEADVNVKLVAQLRKSIKGTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTT+CTK
Sbjct: 61 NFKDLPPAVNKKRLIQKAVFDELVQLVDPHSEPFKPKKGKTNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A +GVE FK
Sbjct: 121 LARHYQSRGFQACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE+ALF+EM + EA PD I V+D++IGQ A QA+AFK++
Sbjct: 181 KERFDIIIVDTSGRHRQESALFQEMIDIQEAVKPDETIMVLDATIGQQAEAQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHAKGGGA+SAVAAT++P++F+GTGEHM + E F + F+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAKGGGAISAVAATRTPIVFLGTGEHMLDLERFAPQQFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + + +DQ+ + ++ ++EG FT+R + +Q QNI+KMGP+ ++ M+PG S+ +
Sbjct: 301 TGLIEHVQS-LKLDQK-DTIKHITEGIFTVRDLRDQLQNIMKMGPLSKMAGMIPGMSN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E K+KR + + DSMT++ELDS ++ SR+ R+A+GSG VREV ++L
Sbjct: 358 MSGMDDEEGSLKLKRMIYICDSMTDKELDSDGRLFLDQPSRMTRVAKGSGTFVREVEDLL 417
Query: 420 EEYKRLAKIWSKMKG 434
+ + +A + KM G
Sbjct: 418 TQQRMMAGMAKKMGG 432
>gi|320583360|gb|EFW97575.1| Signal recognition particle protein [Ogataea parapolymorpha DL-1]
Length = 530
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/464 (49%), Positives = 329/464 (70%), Gaps = 6/464 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +++ A ++D+ ++ L EI+ AL++ADV KLV ++ +K +
Sbjct: 1 MVLADLGKRINSAVSEVTKANVVDQTAVDGLLKEISNALIEADVNVKLVLNLRKKLKSTI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ G NK+++IQ+A+F+ELC ++D + + PKK K +VIMFVGLQG+GKTTTCT
Sbjct: 61 EQEE-KPGVNKKKLIQKAVFDELCDLVDCKETELYKPKKKKTNVIMFVGLQGAGKTTTCT 119
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y+Q++G+K +VCADTFRAGAFDQLKQNATKAKIP+YGSYTE+DPV++A +GVE F
Sbjct: 120 KLAVYYQRRGFKVGMVCADTFRAGAFDQLKQNATKAKIPYYGSYTEADPVKVASDGVEKF 179
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KKE ++IIVDTSGRH+QE+ LF EM Q+ EA P+ I V+D+SIGQAA Q++AFK+S
Sbjct: 180 KKEKFEIIIVDTSGRHRQESELFAEMIQIGEAVQPNQTIMVLDASIGQAAESQSRAFKES 239
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ GA+I+TKMDGHAKGGGA+SAVAAT +P+ FIGTGEH+++ E F + FVS+LLG+GD
Sbjct: 240 SNFGAIILTKMDGHAKGGGAISAVAATHTPIAFIGTGEHINDLESFTPRQFVSKLLGIGD 299
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
G M+ + + +DQ+ + ++ EG FTLR + Q NILKMGP+ ++ MLPG E
Sbjct: 300 IQGLMEHVQS-LNLDQK-DTIKNFQEGKFTLRDLQTQMNNILKMGPLSKIAQMLPGGIGE 357
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 418
+M + E+E+ + KR + +MDSMT +ELDS ++ SRI+R+ARGSG V EV +
Sbjct: 358 MMNQVGEEETSKRFKRMVYVMDSMTKQELDSDGDIFVDQPSRIVRVARGSGTSVTEVEAV 417
Query: 419 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNM-NAQHMSKVLPQ 461
L + K A++ K ++ M+ M N Q+M + + Q
Sbjct: 418 LMQQKMFARMAQTTKSMQQGGANPMAGGRGGMFNPQNMQRAMQQ 461
>gi|367036313|ref|XP_003648537.1| hypothetical protein THITE_2106112 [Thielavia terrestris NRRL 8126]
gi|346995798|gb|AEO62201.1| hypothetical protein THITE_2106112 [Thielavia terrestris NRRL 8126]
Length = 521
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/457 (49%), Positives = 325/457 (71%), Gaps = 4/457 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L +I ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKAFDSMLKQICSALLEADVNVRLVGQLRKSIRATV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVRLVDPHAEPFKPKKGKANVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A +GVE FK
Sbjct: 121 LARHYQSRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQESALFQEMVDIQAAIRPDETIMVLDASIGQQAEAQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + F+S+LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIVFIGTGEHMLDLERFVPRNFISKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + + +DQ+ E ++ +SEG FT+R + +Q QNI+KMGP+ ++ M+PG S+ +
Sbjct: 301 AGLVEHVQS-LKLDQK-ETIKHISEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMSN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E K+KR + + DSMT++ELDS ++ +R+ R+ARGSG VREV ++L
Sbjct: 358 MQGMDDEEGSLKLKRMIYICDSMTDKELDSDGKIFIDQPTRMTRVARGSGTTVREVEDLL 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMS 456
+ + +A + KM G + SAL+ AQ ++
Sbjct: 418 TQQRMMAGMAKKMGGNMKNMQRAQSALAGGNKAQQLA 454
>gi|157134401|ref|XP_001663285.1| signal recognition particle 54 kda protein [Aedes aegypti]
gi|108870487|gb|EAT34712.1| AAEL013076-PA [Aedes aegypti]
Length = 401
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/396 (57%), Positives = 298/396 (75%), Gaps = 19/396 (4%)
Query: 111 GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
GSGKTTTCTK AY++QKK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV
Sbjct: 8 GSGKTTTCTKLAYHYQKKNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVV 67
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAF 230
IA +GV+ FKKE + IIVDTSGRHKQE +LFEEM V+ A PD +IFVMD++IGQA
Sbjct: 68 IAQDGVDMFKKEGFEFIIVDTSGRHKQEESLFEEMLAVATAVKPDNIIFVMDATIGQACE 127
Query: 231 DQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 290
QA+AFK+ V +G+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+ E F KPF
Sbjct: 128 AQAKAFKEKVDIGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHIDDLEPFKTKPF 187
Query: 291 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVF 350
+S+LLGMGD G +DK++E+ +D EL+ K+ G FT+R MYEQFQNI+KMGP Q+
Sbjct: 188 ISKLLGMGDIEGLIDKVNEL-NLDDNEELIDKIKHGQFTIRDMYEQFQNIMKMGPFSQIM 246
Query: 351 SMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARG 407
M+PGFS + M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +R++R+A+G
Sbjct: 247 GMIPGFSQDFMTKGGEQESMARIKRLMTMMDSMSDGELDNKDGAKLFSKQPTRVIRVAQG 306
Query: 408 SGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVL 459
SG REV +++ +Y + A + KM G+K + K G+M+ +N+N Q M+K++
Sbjct: 307 SGVTEREVRDLISQYTKFAAVIKKMGGIKGLFKSGDMT---KNVNPTQMAKLNQQMAKMI 363
Query: 460 PQGMLKQIGGVGGLQNLMKQM----GSTKDMMGMFG 491
M +Q+GG+ GLQN+M+Q+ G ++MG FG
Sbjct: 364 DPRMFQQMGGMSGLQNMMRQLQQGAGGLGNLMGGFG 399
>gi|342881717|gb|EGU82549.1| hypothetical protein FOXB_06915 [Fusarium oxysporum Fo5176]
Length = 476
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/435 (52%), Positives = 311/435 (71%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTNLTREQNLDEKAFDGMLKEICAALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFRPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GV+ FK
Sbjct: 121 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAEVARAGVDQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM + EA PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQESALFQEMVDIQEAIKPDETIMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDFEKFAPQQFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G M+ + + Q + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S+ +
Sbjct: 301 AGLMEHVQSLNL--NQKDTIKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E AK+KR + + DSMT++ELDS L+ +R+ RIARGSG VREV ++L
Sbjct: 358 MQGMDDEEGGAKLKRMIYICDSMTDKELDSDGKILIEQPTRMTRIARGSGTSVREVEDLL 417
Query: 420 EEYKRLAKIWSKMKG 434
+ + +A + KM G
Sbjct: 418 TQQRMMAGMAKKMGG 432
>gi|353227294|emb|CCA77807.1| probable signal recognition particle subunit SRP54 [Piriformospora
indica DSM 11827]
Length = 563
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/465 (48%), Positives = 325/465 (69%), Gaps = 23/465 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLV----REMQTNI 56
MVLA LG ++ A+ ++ + ++DEKVL+E L EIT+ALL++DV KLV ++++ +
Sbjct: 1 MVLADLGRKLNSALSNLNKSPVVDEKVLDELLKEITKALLESDVNVKLVQTLKKQVKAKV 60
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
K + D + ++ IIQ+AIF+EL +++DPG + PKKG P+VIM VGLQG+GKTT
Sbjct: 61 KPALESTDKSKEGQRKSIIQKAIFDELVQLVDPGVEPYKPKKGHPNVIMAVGLQGNGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTK A ++QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ FYGSYTE+DPV IA EGV
Sbjct: 121 TCTKLAVHYQKRGFKCCIVCADTFRAGAFDQTRQSATKAKVHFYGSYTETDPVAIASEGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
FKKE ++IIVDTSGRH+QE+ LFEEM+Q+ A PD+ + V+D+SIGQAA Q++AF
Sbjct: 181 AKFKKERFEVIIVDTSGRHRQESELFEEMKQIQAAVKPDMTVLVLDASIGQAAEAQSRAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+++ + F +PF+S+LLG
Sbjct: 241 KESADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLNDLDRFSPEPFISQLLG 300
Query: 297 MGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
MGD G M+ + ++ D+Q E+ + EG ++R EQ QNI+ MGP+ ++ S +P
Sbjct: 301 MGDLRGLMEHMSDLARQNPDRQKEMTKAFEEGKLSIRDWREQMQNIMSMGPLSKITSKIP 360
Query: 355 GFS---SELMPKGREKESQAKIKRYMTMMDSMTNEELDS----------SNPKLMNDSRI 401
G + L +G ++E+ ++KR + + DSMT ELDS N R+
Sbjct: 361 GMAGLMEGLAGEGTDEEASRRLKRLICITDSMTPAELDSDGMLFLRIGKDNKPTGVTKRV 420
Query: 402 MRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSAL 446
+R+A+GSG VREV E+L +++ +A + +M G K G + AL
Sbjct: 421 LRVAKGSGASVREVEEVLMQHRMMANVAKQMGG----KNGMLQAL 461
>gi|426200103|gb|EKV50027.1| hypothetical protein AGABI2DRAFT_190440 [Agaricus bisporus var.
bisporus H97]
Length = 562
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/481 (47%), Positives = 325/481 (67%), Gaps = 23/481 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++DEKVL+ L EIT ALL+ DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDVMLKEITAALLETDVNVKLVASLRNKVKHKV 60
Query: 61 ------NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
N D A N++ + Q+A+F+EL ++DPG + PKKG+ +VIM VGLQG+GK
Sbjct: 61 KALIEQNAGDKAKEMNRKHLTQKAVFDELVSLVDPGVEPYKPKKGQCNVIMLVGLQGNGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G+K A+VCADTFRAGAFDQ +Q+AT+AK+ ++GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVHYQRRGFKSAIVCADTFRAGAFDQTRQSATRAKVAYFGSYTETDPVSIAAQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GV FKKE ++IIVDTSGRHKQE+ LF+EM Q+ +A P++ + V+D+SIGQAA Q++
Sbjct: 181 GVSKFKKERFEVIIVDTSGRHKQESELFQEMVQIGDAVKPNMTVLVLDASIGQAAETQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+G GEH+ + + F +PFVS+L
Sbjct: 241 AFKDSADFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGVGEHLHDLDRFSPQPFVSKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
LG+GD G M+ + ++ D+Q E+ +KL EG ++R EQ QN++ MGPI ++ SM
Sbjct: 301 LGLGDMQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPISKIASM 360
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDS----------RIM 402
+PG E++ +G ++E ++KR + + DSMT ELDS M R+
Sbjct: 361 IPGLPQEML-QGSDEEGSQRMKRMIYITDSMTAGELDSDGSPFMESGKDGKPTGLTWRVT 419
Query: 403 RIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQG 462
R+ARGSG VREV E+L +Y+ +A + + G K G + A+ + A P G
Sbjct: 420 RVARGSGTSVREVEELLCQYRMMANMAKQAGG----KNGWLQAMQKVQQAAGSKGRGPNG 475
Query: 463 M 463
M
Sbjct: 476 M 476
>gi|380490983|emb|CCF35637.1| signal recognition particle protein [Colletotrichum higginsianum]
Length = 501
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/457 (50%), Positives = 320/457 (70%), Gaps = 4/457 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINTAVTNLTREANLDEKAFDGMLKEICAALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK ++IMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKSNIIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGVE FK
Sbjct: 121 LARHYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAREGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEEALFQEMVDIQTAVRPDETIMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGHASGGGAISAVAATHTPIVFIGTGEHMLDFERFAPQQFVSKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + + +DQ+ + ++ ++EG FT+R + +Q NI+KMGP+ ++ M+PG S +
Sbjct: 301 AGLVEHVQS-LKLDQK-DTIKHITEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E AK+KR + + DSMT +ELDS + +R+ R+A GSG VREV ++L
Sbjct: 358 MQGMDDEEGSAKLKRMIYICDSMTEKELDSDGKMFIEQPTRMTRVAHGSGTSVREVEDLL 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMS 456
+ + +A + KM G + SA++ AQ ++
Sbjct: 418 TQQRMMAGMAKKMGGNMKNMQRAQSAMAGGNKAQQLA 454
>gi|321259271|ref|XP_003194356.1| signal recognition particle 54 kDa protein [Cryptococcus gattii
WM276]
gi|317460827|gb|ADV22569.1| Signal recognition particle 54 kDa protein, putative [Cryptococcus
gattii WM276]
Length = 590
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/481 (48%), Positives = 330/481 (68%), Gaps = 25/481 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA LG + A Q+S A++ID+KV++ L E+ ALL++DV KLV ++T +K
Sbjct: 1 MVLADLGTRLHGAWNQLSKASVIDDKVIDSVLKELCAALLESDVNVKLVASLRTKVKAKV 60
Query: 58 -KIVNLDDLAAGH--NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
K + + A G NK+ ++Q+A+F+EL ++DPG + P KGK +V+M VG+QG+GK
Sbjct: 61 KKSLEESEKAGGREANKKNVVQKAVFDELVALVDPGTEPYKPVKGKTNVLMAVGIQGAGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV IA
Sbjct: 121 TTTCTKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVAIASL 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GVE F+KE D+IIVDTSGRHKQE+ LFEEM + A PD+ + V+D+SIGQAA Q++
Sbjct: 181 GVEKFRKERFDVIIVDTSGRHKQESELFEEMVAIGAAVKPDMTLMVLDASIGQAAEGQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEH+++ E F +PF+S+L
Sbjct: 241 AFKDSADFGAIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHLNDLERFAPQPFISKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
LGMGD G ++ + ++ D+Q +L +KL +G FT+R EQ NI+ MG I ++ SM
Sbjct: 301 LGMGDMQGLVEHMQDMARANPDRQKDLAKKLEQGKFTIRDWREQLSNIMNMGSISKIASM 360
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSS-----------NPKLMNDSRI 401
+PG + +M G E+E+ AK+KR + + D+M +ELDS NP +N R
Sbjct: 361 IPGLPAGIM-DGNEEEASAKLKRLIFITDAMRADELDSDGSIFVSYDKEGNPVGLN-KRA 418
Query: 402 MRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQ 461
R+A+GSG +RE+ ++L + + +A + + G + G MSA+ + A + P
Sbjct: 419 KRVAKGSGTSLRELEDLLVQARMMAGMAKQAGG----QNGWMSAMQKMQAAAGGKPLGPN 474
Query: 462 G 462
G
Sbjct: 475 G 475
>gi|171676350|ref|XP_001903128.1| hypothetical protein [Podospora anserina S mat+]
gi|170936241|emb|CAP60900.1| unnamed protein product [Podospora anserina S mat+]
Length = 516
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/435 (51%), Positives = 312/435 (71%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L +I ALL+ADV +LV ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTDLTRAPNLDEKAFDSMLKQICSALLEADVNVRLVGRLRKDIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+A+F+ L ++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLPPAVNKKRLIQKAVFDHLVDLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGV+ FK
Sbjct: 121 LARHYQSRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM + A PD I V+DSSIGQ A QA AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQESALFQEMMDIQNAIKPDETIMVLDSSIGQQAEGQAMAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT++P++FIGTGEHM + E F K F+S+LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATRTPIVFIGTGEHMLDLERFVPKNFISKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + + +DQ+ + ++ ++EG FT+R + +Q QNI+KMGP+ ++ M+PG S+ +
Sbjct: 301 AGLVEHVQS-LKLDQK-DTIKHITEGIFTVRDLRDQLQNIMKMGPLSKMAGMIPGMSN-I 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E K+KR + + DSMT++ELDS + +R+ R+ARGSG VREV ++L
Sbjct: 358 MANMDDEEGSLKLKRMIYICDSMTDKELDSDGKIFIEQPTRMTRVARGSGTTVREVEDLL 417
Query: 420 EEYKRLAKIWSKMKG 434
+ + +A + KM G
Sbjct: 418 TQQRLMAGMAKKMGG 432
>gi|409082272|gb|EKM82630.1| hypothetical protein AGABI1DRAFT_111220 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 562
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/481 (46%), Positives = 325/481 (67%), Gaps = 23/481 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++DEKVL+ L EIT ALL+ DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDVMLKEITAALLETDVNVKLVASLRNKVKHKV 60
Query: 61 ------NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
N D A N++ + Q+A+F+EL ++DPG + PKKG+ +V+M VGLQG+GK
Sbjct: 61 KALIEQNAGDKAKEMNRKHLTQKAVFDELVSLVDPGVEPYKPKKGQCNVVMLVGLQGNGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G+K A+VCADTFRAGAFDQ +Q+AT+AK+ ++GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVHYQRRGFKSAIVCADTFRAGAFDQTRQSATRAKVAYFGSYTETDPVSIAAQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GV FKKE ++IIVDTSGRHKQE+ LF+EM Q+ +A P++ + V+D+SIGQAA Q++
Sbjct: 181 GVSKFKKERFEVIIVDTSGRHKQESELFQEMVQIGDAVKPNMTVLVLDASIGQAAEAQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+G GEH+ + + F +PF+S+L
Sbjct: 241 AFKDSADFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGVGEHLHDLDRFSPQPFISKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
LG+GD G M+ + ++ D+Q E+ +KL EG ++R EQ QN++ MGPI ++ SM
Sbjct: 301 LGLGDMQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPISKIASM 360
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDS----------RIM 402
+PG E++ +G ++E ++KR + + DSMT ELDS M R+
Sbjct: 361 IPGLPQEML-QGSDEEGSQRMKRMIYITDSMTAGELDSDGSPFMESGKDGKPTGLTWRVT 419
Query: 403 RIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQG 462
R+ARGSG VREV E+L +Y+ +A + + G K G + A+ + A P G
Sbjct: 420 RVARGSGTSVREVEELLCQYRMMANMAKQAGG----KNGWLQAMQKVQQAAGSKGRGPNG 475
Query: 463 M 463
M
Sbjct: 476 M 476
>gi|85098637|ref|XP_960643.1| signal recognition particle 54 kDa protein [Neurospora crassa
OR74A]
gi|28922154|gb|EAA31407.1| signal recognition particle 54 kDa protein [Neurospora crassa
OR74A]
gi|28949956|emb|CAD70717.1| probable signal recognition particle subunit SRP54 [Neurospora
crassa]
gi|336473358|gb|EGO61518.1| hypothetical protein NEUTE1DRAFT_120457 [Neurospora tetrasperma
FGSC 2508]
gi|350293361|gb|EGZ74446.1| signal recognition particle 54 kDa protein [Neurospora tetrasperma
FGSC 2509]
Length = 511
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/435 (51%), Positives = 315/435 (72%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKAFDGMLKEICSALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVRLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DPV +A +GV+ FK
Sbjct: 121 LARHYQSRGFRVGLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPVVVARDGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEEALFQEMMDIQTAVKPDETIMVLDASIGQQAEAQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F F+S+LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIVFIGTGEHMLDLERFVPNNFISKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + + +DQ+ + ++ ++EG FT+R + +Q QNI+KMGP+ ++ M+PG S+ +
Sbjct: 301 AGLVEHVQS-LKLDQK-DTIKHITEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMSN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E K+KR + + DSMT++ELDS ++ +R+ R+ARGSG VREV ++L
Sbjct: 358 MQNMDDEEGSLKLKRMIYICDSMTDKELDSDGKIFIDQPTRMTRVARGSGTTVREVEDLL 417
Query: 420 EEYKRLAKIWSKMKG 434
+ + +A + KM G
Sbjct: 418 TQQRMMAGMAKKMGG 432
>gi|310800676|gb|EFQ35569.1| signal recognition particle protein SRP54 [Glomerella graminicola
M1.001]
Length = 526
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/488 (48%), Positives = 335/488 (68%), Gaps = 6/488 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINTAVSNLTREPNLDEKAFDGMLKEICAALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +++MFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKSNIVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGV+ FK
Sbjct: 121 LARHYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEEALFQEMVDIQTAIRPDETIMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGHASGGGAISAVAATHTPIVFIGTGEHMLDFERFAPQQFVSKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + + +DQ+ + ++ ++EG FT+R + +Q NI+KMGP+ ++ M+PG S +
Sbjct: 301 AGLVEHVQS-LKLDQK-DTIKHITEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E AK+KR + + DSMT++ELDS + +R+ R+A GSG VREV ++L
Sbjct: 358 MQGMDDEEGSAKLKRMIYICDSMTDKELDSDGKMFIEQPTRMTRVAHGSGTSVREVEDLL 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 479
+ + +A + KM G + SA++ AQ ++ + Q L+ +GG G M
Sbjct: 418 TQQRMMAGMAKKMGGNMKNMQRAQSAMAGGNKAQQLAAM--QKRLQSMGGAGAGGGGMPD 475
Query: 480 MGSTKDMM 487
MGS M+
Sbjct: 476 MGSLMKML 483
>gi|67469473|ref|XP_650715.1| signal recognition particle protein SRP54 [Entamoeba histolytica
HM-1:IMSS]
gi|56467365|gb|EAL45328.1| signal recognition particle protein SRP54, putative [Entamoeba
histolytica HM-1:IMSS]
gi|407040992|gb|EKE40461.1| signal recognition particle protein SRP54 protein [Entamoeba
nuttalli P19]
gi|449704334|gb|EMD44599.1| signal recognition particle 54 kDa subunit SRP54, putative
[Entamoeba histolytica KU27]
Length = 487
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/491 (48%), Positives = 330/491 (67%), Gaps = 25/491 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+QLG S+ A+++M+++T++DE+V+N L EI +LL DV +R+M NIKK +
Sbjct: 1 MVLSQLGSSLVTALRKMTSSTVVDEEVINTLLKEIETSLLGEDVNPIFIRQMVNNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +D+ G +KR++I+ ++F EL ++DP +F PKKGK V+M VGLQG+GKTTT TK
Sbjct: 61 NSEDIPDGIDKRKLIKDSVFEELINLVDPKTEAFKPKKGKTCVLMMVGLQGAGKTTTITK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y++ +G+KPA+V ADTFRAGA++QL+ NA +A +PF+G ESDPV++A EGV TF+
Sbjct: 121 LALYYKNRGYKPAVVGADTFRAGAYEQLQMNAKRAGVPFFGIKEESDPVKVASEGVRTFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+I+VDTSGRHKQ+ LF+EM+ V +A PD +IFVMD +IGQAAF QA+AFK +V
Sbjct: 181 KEKNDIILVDTSGRHKQDKELFKEMQSVRDAIKPDSIIFVMDGAIGQAAFGQAKAFKDAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGH+ GGGALSAVAATKSP+IFIGTGE ++E E FD + FV +LLGMGD
Sbjct: 241 EVGSVIITKLDGHSNGGGALSAVAATKSPIIFIGTGEKVNEIEEFDAESFVRKLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G + + +++ L EG T+R EQ N+ KMG +G + M+ G + +
Sbjct: 301 KGIAKLAKDFAENAEYKTMVKHLQEGTLTVRDWKEQLSNLQKMGQLGNIMQMI-GLNHPM 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
G + K K +M ++DSMT+ ELD S ++ND SRI R+ARGSGR +REV E+
Sbjct: 360 FQGG---NIEKKFKVFMVILDSMTDRELDGSAKTMLNDESRIRRLARGSGRDIREVNELF 416
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--------QHMSKVLPQGMLKQIGGVG 471
E+ K + ++ PK M A N NA Q M ++LP+G+ +
Sbjct: 417 EQIKLFQQCIDRL-----PKA--MRAQLGNCNAQPNEAAMMQQMQRMLPKGVNQ-----A 464
Query: 472 GLQNLMKQMGS 482
LQ LMKQM +
Sbjct: 465 QLQQLMKQMNA 475
>gi|336264067|ref|XP_003346812.1| hypothetical protein SMAC_05070 [Sordaria macrospora k-hell]
gi|380090282|emb|CCC11858.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 512
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/471 (49%), Positives = 332/471 (70%), Gaps = 8/471 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKAFDGMLKEICSALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVRLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DPV +A +GV+ FK
Sbjct: 121 LARHYQSRGFRVGLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPVVVARDGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE +LF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEESLFQEMMDIQTAVKPDETIMVLDASIGQQAEAQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F F+S+LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIVFIGTGEHMLDLERFVPNNFISKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + + +DQ+ + ++ ++EG FT+R + +Q QNI+KMGP+ ++ M+PG SS +
Sbjct: 301 AGLVEHVQS-LKLDQK-DTIKHITEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMSS-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND--SRIMRIARGSGRQVREVMEM 418
M ++E K+KR + + DSMT++ELD S+ K+ + +R+ R+A+GSG VREV ++
Sbjct: 358 MQNMDDEEGSLKLKRMIYICDSMTDKELD-SDGKIFTEQPTRMTRVAKGSGTTVREVEDL 416
Query: 419 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGG 469
L + + +A + KM G + SA+ AQ ++ + Q L+ +GG
Sbjct: 417 LTQQRMMAGMAKKMGGNMKNMQRAQSAMGGGNKAQQLAAM--QKRLQSMGG 465
>gi|3334340|sp|O15821.1|SRP54_ENTHI RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|17980209|gb|AAL50553.1| signal recognition particle 54 kDa subunit SRP54 [Entamoeba
histolytica]
Length = 487
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/491 (48%), Positives = 330/491 (67%), Gaps = 25/491 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+QLG S+ A+++M+++T++DE+V+N L EI +LL DV +R+M NIKK +
Sbjct: 1 MVLSQLGSSLVTALRKMTSSTVVDEEVINTLLKEIETSLLGEDVNPIFIRQMVNNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +D+ G +KR++I+ ++F EL ++DP +F PKKGK V+M VGLQG+GKTTT TK
Sbjct: 61 NSEDIPDGIDKRKLIKDSVFEELINLVDPKTEAFKPKKGKTCVLMMVGLQGAGKTTTITK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y++ +G+KPA+V ADTFRAGA++QL+ NA +A +PF+G ESDPV++A EGV TF+
Sbjct: 121 LALYYKNRGYKPAVVGADTFRAGAYEQLQMNAKRAGVPFFGIKEESDPVKVASEGVRTFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+I+VDTSGRHKQ+ LF+EM+ V +A PD +IFVMD +IGQAAF QA+AFK +V
Sbjct: 181 KEKNDIILVDTSGRHKQDKELFKEMQSVRDAIKPDSIIFVMDGAIGQAAFGQAKAFKDAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGH+ GGGALSAVAATKSP+IFIGTGE ++E E FD + FV +LLGMGD
Sbjct: 241 EVGSVIITKLDGHSNGGGALSAVAATKSPIIFIGTGEKVNEIEEFDAESFVRQLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G + + +++ L EG T+R EQ N+ KMG +G + M+ G + +
Sbjct: 301 KGIAKLAKDFAENAEYKTMVKHLQEGTLTVRDWKEQLSNLQKMGQLGNIMQMI-GLNHPM 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
G + K K +M ++DSMT+ ELD S ++ND SRI R+ARGSGR +REV E+
Sbjct: 360 FQGG---NIEKKFKVFMVILDSMTDRELDGSAKTMLNDESRIRRLARGSGRDIREVNELF 416
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--------QHMSKVLPQGMLKQIGGVG 471
E+ K + ++ PK M A N NA Q M ++LP+G+ +
Sbjct: 417 EQIKLFQQCIDRL-----PKA--MRAQLGNCNAQPNEAAMMQQMQRMLPKGVNQ-----A 464
Query: 472 GLQNLMKQMGS 482
LQ LMKQM +
Sbjct: 465 QLQQLMKQMNA 475
>gi|167385123|ref|XP_001737215.1| signal recognition particle 54 kDa protein [Entamoeba dispar
SAW760]
gi|165900054|gb|EDR26502.1| signal recognition particle 54 kDa protein [Entamoeba dispar
SAW760]
Length = 487
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/491 (48%), Positives = 329/491 (67%), Gaps = 25/491 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+QLG S+ A+++M+++T++DE+V+N L EI +LL DV +R+M NIKK +
Sbjct: 1 MVLSQLGSSLVTALRKMTSSTVVDEEVINTLLKEIETSLLGEDVNPIFIRQMVNNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +D+ G +KR++I+ ++F EL ++DP F PKKGK V+M VGLQG+GKTTT TK
Sbjct: 61 NSEDIPDGIDKRKLIKDSVFEELINLVDPKTEPFKPKKGKTCVLMMVGLQGAGKTTTITK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y++ +G+KPA+V ADTFRAGA++QL+ NA +A +PF+G ESDPV++A EGV TF+
Sbjct: 121 LALYYKNRGYKPAVVGADTFRAGAYEQLQMNAKRAGVPFFGIKEESDPVKVASEGVRTFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+I+VDTSGRHKQ+ LF+EM+ V +A PD +IFVMD +IGQAAF QA+AFK +V
Sbjct: 181 KEKNDIILVDTSGRHKQDKELFKEMQSVRDAIKPDSIIFVMDGAIGQAAFGQAKAFKDAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGH+ GGGALSAVAATKSP+IFIGTGE ++E E FD + FV +LLGMGD
Sbjct: 241 EVGSVIITKLDGHSNGGGALSAVAATKSPIIFIGTGEKVNEIEEFDAESFVRKLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G + + +++ L EG T+R EQ N+ KMG +G + M+ G + +
Sbjct: 301 KGIAKLAKDFAENAEYKTMVKHLQEGTLTVRDWKEQLTNLQKMGQLGNIMQMI-GLNHPM 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
G + K K +M ++DSMT+ ELD S ++ND SRI R+ARGSGR +REV E+
Sbjct: 360 FQGG---NIEKKFKVFMVILDSMTDRELDGSAKTMLNDESRIRRLARGSGRDIREVNELF 416
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--------QHMSKVLPQGMLKQIGGVG 471
E+ K + ++ PK M A N NA Q M ++LP+G+ +
Sbjct: 417 EQIKLFQQCIDRL-----PKA--MRAQLGNSNAQPNEAAMIQQMQRMLPKGVNQ-----A 464
Query: 472 GLQNLMKQMGS 482
LQ LMKQM +
Sbjct: 465 QLQQLMKQMNA 475
>gi|406700686|gb|EKD03851.1| signal recognition particle 54 kDa protein [Trichosporon asahii
var. asahii CBS 8904]
Length = 557
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/502 (47%), Positives = 334/502 (66%), Gaps = 40/502 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ Q S + +DE ++ + E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGARLHGALNQFSKTSSVDETAIDALVKELCAALLESDVNVKLVSQLRAKVKAKV 60
Query: 61 --NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTC 118
NL+D + +A+F+EL ++DPG + P KGK +VIM VG+QG+GKTTTC
Sbjct: 61 KRNLEDAEKAGGR-----EAVFDELVALVDPGTEPYKPVKGKVNVIMAVGIQGAGKTTTC 115
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
TK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPF+GSYTE+DPV IA +GVE
Sbjct: 116 TKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFFGSYTETDPVTIAYQGVEK 175
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
F+KE D+IIVDTSGRHKQE+ LFEEM +S+A PD+ + V+D+SIGQAA Q++AFK
Sbjct: 176 FRKERFDVIIVDTSGRHKQESELFEEMVSISKAVKPDMTVMVLDASIGQAAEGQSRAFKD 235
Query: 239 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 298
S G++IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEH+++ E F +PF+S+LLGMG
Sbjct: 236 SSDFGSIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHLNDLEKFAPQPFISKLLGMG 295
Query: 299 DWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
D G M+ + ++ D Q +L +KL EG FT+R +Q NI+ MG + ++ SM+PG
Sbjct: 296 DIQGLMEHMQDMARANPDGQKDLAKKLGEGKFTIRDWKDQLSNIMNMGSLSKIASMVPGM 355
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 416
S +M +G E+E+ AK+KR + + D+M +ELDS D I R+A+GSG VREV
Sbjct: 356 SG-MMEQGGEEEAAAKLKRMIFITDAMRTDELDS-------DGLIFRVAQGSGTSVREVE 407
Query: 417 EMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-----------------QHMSKVL 459
E+L + + +A + + G + G MSA+ + A Q M +
Sbjct: 408 ELLAQARMMAGMARQAGG----QNGWMSAMQKMQAAAGGKPLGPNGMPSQQQIQAMRNAM 463
Query: 460 PQGMLKQI--GGVGGLQNLMKQ 479
P +LK++ G GG Q +M +
Sbjct: 464 PPELLKKLRAAGPGGAQKMMAE 485
>gi|46130818|ref|XP_389140.1| hypothetical protein FG08964.1 [Gibberella zeae PH-1]
Length = 521
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/435 (52%), Positives = 310/435 (71%), Gaps = 11/435 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK EI ALL+ADV KLV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTNLTREQNLDEK-------EICAALLEADVNVKLVGQLRKSIKTTV 53
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 54 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFRPKKGKSNVIMFVGLQGAGKTTTCTK 113
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GV+ FK
Sbjct: 114 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAEVARAGVDQFK 173
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM + EA PD I V+D+SIGQ A QA+AFK++
Sbjct: 174 KERFEVIIVDTSGRHRQESALFQEMVDIQEAIKPDETIMVLDASIGQQAESQAKAFKEAA 233
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FV +LLGMGD
Sbjct: 234 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDFEKFAPQQFVQKLLGMGDM 293
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G M+ + + Q + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S+ +
Sbjct: 294 AGLMEHVQSLNL--NQKDTIKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSN-M 350
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E AK+KR + + DSMT++ELDS L++ +R+ RIARGSG VREV ++L
Sbjct: 351 MQGMDDEEGGAKLKRMIYICDSMTDKELDSDGKILIDQPTRMTRIARGSGTSVREVEDLL 410
Query: 420 EEYKRLAKIWSKMKG 434
+ + +A + KM G
Sbjct: 411 TQQRMMAGMAKKMGG 425
>gi|440633691|gb|ELR03610.1| signal recognition particle protein SRP54 [Geomyces destructans
20631-21]
Length = 527
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/435 (51%), Positives = 312/435 (71%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + + EI ALL+ADV KLV ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSSNLDEKAFDGMIKEICTALLEADVNVKLVGNLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+++F+EL K++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLEPSVNKKRLIQKSVFDELVKLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV+ FK
Sbjct: 121 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE ALF+EM+ + +A PD I V+DSSIGQ A Q++AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEDALFQEMKDIQDAVKPDQTIMVLDSSIGQQAEAQSKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT++P++FIGTGEHM + E F + FV++LLGMGD
Sbjct: 241 DFGAIIITKTDGSASGGGAISAVAATRTPIVFIGTGEHMLDLERFAPQQFVNKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++ + + +DQ+ + ++ ++EG FT+R + +Q NI+KMGP+ ++ M+PG S +
Sbjct: 301 QGLVEHVQS-LKLDQK-DTIKHIAEGVFTIRDLRDQLSNIMKMGPLSKMAGMIPGMSG-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E K+KR + + DSMT +ELD + +R+ RIA GSG VREV ++L
Sbjct: 358 MQGMDDEEGSLKLKRMIYICDSMTTKELDCDGKLFIEQPTRMTRIAHGSGTSVREVEDIL 417
Query: 420 EEYKRLAKIWSKMKG 434
++K +A + KM G
Sbjct: 418 TQHKMMAGMAKKMGG 432
>gi|361124020|gb|EHK96146.1| putative Signal recognition particle 54 kDa protein like protein
[Glarea lozoyensis 74030]
Length = 540
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/435 (51%), Positives = 310/435 (71%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + + EI ALL+ADV KLV ++ +IK V
Sbjct: 12 MVLQDLGRRINAAVSDLTRSSNLDEKAFDGMIKEICSALLEADVNVKLVGNLRKSIKSSV 71
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +LA NK+R+IQ+ +++EL K++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 72 NFKELAPSVNKKRLIQKTVYDELVKLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 131
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K +VCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGVE FK
Sbjct: 132 LARHYQSRGFKACMVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAREGVEKFK 191
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE ALF+EM + A PD I V+D+SIGQ A Q++AFK++
Sbjct: 192 KEKFDIIIVDTSGRHRQEDALFQEMVDIQNAVKPDQTIMVLDASIGQQAEAQSKAFKETA 251
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + F+S+LLGMGD
Sbjct: 252 DFGAIIITKTDGHASGGGAISAVAATHTPIVFIGTGEHMLDLEKFAPQQFISKLLGMGDM 311
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++ + + +DQ+ + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S +
Sbjct: 312 QGLVEHVQS-LKLDQK-DTMKHIVEGVFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG-M 368
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E K+KR + + DSMT +ELDS + +R+ RIA GSG VREV ++L
Sbjct: 369 MQGMDDEEGSLKLKRMIYICDSMTAKELDSDGKMFIEQPTRMTRIACGSGTSVREVEDLL 428
Query: 420 EEYKRLAKIWSKMKG 434
++K +A + KM G
Sbjct: 429 TQHKMMAGMAKKMGG 443
>gi|340519181|gb|EGR49420.1| signal recognition particle subunit srp54 [Trichoderma reesei QM6a]
Length = 520
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/457 (50%), Positives = 317/457 (69%), Gaps = 11/457 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK EI ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSNLTREQNLDEK-------EICAALLEADVNVRLVGQLRKSIRSTV 53
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 54 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 113
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G + LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 114 LARHYQTRGLRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVEQFK 173
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE+ALF+EM + A NPD I V+D+SIGQ A QA+AFK++
Sbjct: 174 KEKFDVIIVDTSGRHRQESALFQEMIDIQAAVNPDETIMVLDASIGQQAEAQAKAFKEAA 233
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F+ + FV +LLGMGD
Sbjct: 234 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFEPQRFVQKLLGMGDM 293
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + + Q + ++ L EG FT+R + +Q NI+KMGP+ ++ M+PG S L
Sbjct: 294 AGLVEHVQSLNL--NQKDTMKHLQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG-L 350
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E AK+KR + + DSMT++ELDS L+++ +R+ RIARGSG VREV ++L
Sbjct: 351 MQGMDDEEGGAKLKRMIYICDSMTDKELDSDGKLLIDEPTRMTRIARGSGTSVREVEDLL 410
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMS 456
+ + +A + KM G + A+S AQ M+
Sbjct: 411 TQQRMMAGMAKKMGGNMKNMQRAQQAMSGANKAQQMA 447
>gi|405120876|gb|AFR95646.1| signal recognition particle protein [Cryptococcus neoformans var.
grubii H99]
Length = 587
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/481 (48%), Positives = 329/481 (68%), Gaps = 25/481 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA LG + A Q+S A++ID+KV++ L E+ ALL++DV KLV ++T +K
Sbjct: 1 MVLADLGTRLHGAWNQLSKASVIDDKVIDGVLKELCAALLESDVNVKLVASLRTKVKAKV 60
Query: 58 -KIVNLDDLAAGH--NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
K + + G NK+ ++Q+A+F+EL ++DPG + P KGK +V+M VG+QG+GK
Sbjct: 61 KKSLEESEKTGGREANKKNVVQKAVFDELVALVDPGTEPYKPVKGKTNVLMAVGIQGAGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV IA
Sbjct: 121 TTTCTKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVAIASL 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GVE F+KE D+I+VDTSGRHKQE+ LFEEM + A PD+ + V+D+SIGQAA Q++
Sbjct: 181 GVEKFRKERFDVIVVDTSGRHKQESELFEEMVAIGAAVKPDMTLMVLDASIGQAAEGQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEH+++ E F +PF+S+L
Sbjct: 241 AFKDSADFGAIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHLNDLERFAPQPFISKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
LGMGD G ++ + ++ D+Q +L +KL +G F++R EQ NI+ MG I ++ SM
Sbjct: 301 LGMGDMQGLVEHMQDMARANPDRQKDLAKKLEQGKFSIRDWREQLSNIMNMGSISKIASM 360
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSS-----------NPKLMNDSRI 401
+PG + +M G E+E+ AK+KR + + D+M +ELDS NP +N R
Sbjct: 361 IPGLPAGIM-DGNEEEASAKLKRLIFITDAMRADELDSDGSIFVSYDKQGNPVGLN-KRA 418
Query: 402 MRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQ 461
R+A+GSG +RE+ ++L + + +A + + G + G MSA+ + A + P
Sbjct: 419 KRVAKGSGTSLRELEDLLVQARMMAGMAKQAGG----QNGWMSAMQKMQAAAGGKPLGPN 474
Query: 462 G 462
G
Sbjct: 475 G 475
>gi|406860320|gb|EKD13379.1| signal recognition particle protein SRP54 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 525
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/435 (51%), Positives = 309/435 (71%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + + EI ALL+ADV +LV ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSSNLDEKAFDGMIKEICAALLEADVNVRLVGNLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N D A G NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDQAPGVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKANVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGVE FK
Sbjct: 121 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAKEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE ALF+EM + A PD I V+D+SIGQ A Q++AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEDALFQEMVDIQTAVKPDQTIMVLDASIGQQAEAQSKAFKETA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGHASGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFVSKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++ + + +DQ+ + ++ ++EG FT+R + +Q NI+KMGP+ ++ M+PG S +
Sbjct: 301 QGLVEHVQS-LKLDQK-DTMKHIAEGVFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M + E K+KR + + DSMT +ELDS + +R+ RIA GSG V EV ++L
Sbjct: 358 MQGMDDDEGSMKLKRMIYICDSMTAKELDSDGKMFIEQPTRMTRIAYGSGTSVHEVEDLL 417
Query: 420 EEYKRLAKIWSKMKG 434
++K +A + KM G
Sbjct: 418 TQHKMMAGMAKKMGG 432
>gi|258571053|ref|XP_002544330.1| signal recognition particle 54 kDa protein [Uncinocarpus reesii
1704]
gi|237904600|gb|EEP79001.1| signal recognition particle 54 kDa protein [Uncinocarpus reesii
1704]
Length = 539
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/438 (51%), Positives = 303/438 (69%), Gaps = 3/438 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + L EI ALL ADV +LV+E++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSSNLDEKAFDSMLKEICAALLSADVNVRLVQELRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N + NK+R+IQ+A+F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSIPPAVNKKRLIQKAVFDQLVTLVDPKTEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFKSALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE +LIIVDTSGRHKQEA LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KEKFELIIVDTSGRHKQEADLFTEMIQIQNAVKPDQTIMVLDSTIGQAAEAQSAAFKSTA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAATK+P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATKTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+ ++ + V E + +SEG FTLR E +I+KMGP+ ++ SM+PG S
Sbjct: 301 ASLVEHVQAVTQGSAGAKETYKHISEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSG- 359
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 418
L +++ K++R + + DSMT ELD ++ SRI+R+A GSG VREV ++
Sbjct: 360 LTAGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFVDQPSRIVRVAYGSGTSVREVEDL 419
Query: 419 LEEYKRLAKIWSKMKGLK 436
L ++K +A + K+ G K
Sbjct: 420 LSQHKMMAGMAKKVGGQK 437
>gi|358382412|gb|EHK20084.1| hypothetical protein TRIVIDRAFT_48175 [Trichoderma virens Gv29-8]
Length = 517
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/457 (50%), Positives = 317/457 (69%), Gaps = 11/457 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK EI ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSNLTREQNLDEK-------EICAALLEADVNVRLVGQLRKSIRSTV 53
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 54 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 113
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G + LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 114 LARHYQSRGLRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVEQFK 173
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE+ALF+EM + A +PD I V+D+SIGQ A QA+AFK++
Sbjct: 174 KEKFDVIIVDTSGRHRQESALFQEMIDIQAAVSPDETIMVLDASIGQQAEAQAKAFKEAA 233
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F+ + FV +LLGMGD
Sbjct: 234 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFEPQRFVQKLLGMGDM 293
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + + Q + ++ L EG FT+R + +Q NI+KMGP+ ++ M+PG S L
Sbjct: 294 AGLVEHVQSLNL--NQKDTMKHLQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG-L 350
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E AK+KR + + DSMT++ELDS L+++ +R+ RIARGSG VREV ++L
Sbjct: 351 MQGMDDEEGGAKLKRMIYICDSMTDKELDSDGKILIDEPTRMTRIARGSGTSVREVEDLL 410
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMS 456
+ + +A + KM G + A+S AQ M+
Sbjct: 411 TQQRMMAGMAKKMGGNMKNMQRAQQAMSGANKAQQMA 447
>gi|346975514|gb|EGY18966.1| srp54-like protein [Verticillium dahliae VdLs.17]
Length = 525
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/435 (51%), Positives = 307/435 (70%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINTAVSDLTRAPNLDEKAFDGMLKEICAALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+ +F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLPPAVNKKRLIQKTVFDELVKLVDPHAEPFKPKKGKANVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGV+ FK
Sbjct: 121 LARHYQARGLKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAREGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQEENLFQEMVDIQAAIKPDETIMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDFERFAPQQFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+ ++ + + +DQ+ + ++ ++EG FT+R + +Q NI+KMGP+ ++ M+PG S +
Sbjct: 301 ASLVEHVQS-LKLDQK-DTMKHITEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E K+KR + + DSMT++ELDS +R+ R+ARGSG VREV ++L
Sbjct: 358 MQGMDDEEGSLKLKRMIYICDSMTDKELDSDGKMFTEQPTRMTRVARGSGTSVREVEDLL 417
Query: 420 EEYKRLAKIWSKMKG 434
+ + +A + KM G
Sbjct: 418 TQQRMMAGMAKKMGG 432
>gi|402225128|gb|EJU05189.1| signal recognition particle protein [Dacryopinax sp. DJM-731 SS1]
Length = 558
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/522 (45%), Positives = 339/522 (64%), Gaps = 39/522 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ AI ++ + ID+K L+ L EI ALL++DV KLV +++ ++ V
Sbjct: 1 MVLADLGRRINSAISSLNRSPTIDDKQLDAALKEICTALLESDVNVKLVASLRSRVRTKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D A +R ++Q+ +F+EL +++PG + PKKG+ ++IM VGLQG+GKT
Sbjct: 61 KAALEGGADKAKEAQRRNVVQKTVFDELVSLVNPGVEPYKPKKGQSNIIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVVIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
VE F+KE ++IIVDTSGRHKQE LF EM Q+S A PD+ I V+D+SIGQAA Q++A
Sbjct: 181 VEKFRKERFEIIIVDTSGRHKQEKDLFAEMEQISAAVKPDMTILVLDASIGQAAEAQSRA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK++ GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+GTGEH+ + E F +PF+S++L
Sbjct: 241 FKEAADFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGTGEHLSDLERFAPEPFISKML 300
Query: 296 GMGDWSGFMDKIHEVVPMD--QQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 353
GMGD G ++++ E+ D +Q E+++ L +G F+++ EQ N++ MG I + SM+
Sbjct: 301 GMGDIQGLVEQMQEMAQRDPEKQKEVMKNLEQGKFSIKDWREQMGNVMSMGSISKFASMI 360
Query: 354 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN-----------DSRIM 402
PG G E+E +K KR + M DSMT EL+S ++ + R
Sbjct: 361 PGLPDM---AGSEEEISSKFKRMIYMTDSMTAYELESDGLCFVDMEKDGKTPIGVNWRAQ 417
Query: 403 RIARGSGRQVREVMEMLEEYKRLAKI---------W----SKMKGLKIPKKGEMSALSRN 449
R+ARGSG V EV EML +Y+ +A + W KM+ K + +
Sbjct: 418 RVARGSGTSVAEVEEMLFQYRMMANMAKGAGGKNGWIQAMQKMQAAAGGKGRGPNGMPSP 477
Query: 450 MNAQHMSKVLPQGMLKQI--GGVGGLQNLMKQM---GSTKDM 486
Q M K LP GML+++ GG+GG+Q++M+QM G DM
Sbjct: 478 AQIQAMQKALPPGMLQKLRSGGMGGIQDMMRQMMPGGEMPDM 519
>gi|302896050|ref|XP_003046905.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727833|gb|EEU41192.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 518
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/435 (51%), Positives = 309/435 (71%), Gaps = 8/435 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK EI ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVNNLTREQNLDEK----AGPEICAALLEADVNVRLVGQLRKSIRTTV 56
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP SF PKKGK SVIMFVGLQG+GKTTTCTK
Sbjct: 57 NFKELPPAVNKKRLIQKAVFDELVKLVDPHADSFRPKKGKSSVIMFVGLQGAGKTTTCTK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 117 LARHYQSRGFKSCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVARAGVEQFK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ ++IIVDTSGRH+QE+ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 177 KDRFEVIIVDTSGRHRQESALFQEMIDIQNAIQPDETIMVLDASIGQQAESQAKAFKEAA 236
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FV +LLGMGD
Sbjct: 237 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLEKFAPQQFVQKLLGMGDM 296
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G M+ + + Q + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S+ +
Sbjct: 297 AGLMEHVQSLNL--NQKDTIKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSN-M 353
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E AK+KR + + DSMT++ELDS L++ SR+ RIARGSG VREV ++L
Sbjct: 354 MQGMDDEEGGAKLKRMIYICDSMTDKELDSDGKILIDQPSRMTRIARGSGTSVREVEDLL 413
Query: 420 EEYKRLAKIWSKMKG 434
+ + +A + KM G
Sbjct: 414 TQQRMMAGMAKKMGG 428
>gi|315049435|ref|XP_003174092.1| signal recognition particle protein [Arthroderma gypseum CBS
118893]
gi|311342059|gb|EFR01262.1| signal recognition particle protein [Arthroderma gypseum CBS
118893]
Length = 543
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/474 (48%), Positives = 319/474 (67%), Gaps = 7/474 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK L+ + EI ALL ADV +LV++++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNTVDEKALDAMIKEICAALLSADVNVRLVQQLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + NK+R+IQ+A+F++L ++DP F PKKGKP+VIM VGLQG+GKTTTCTK
Sbjct: 61 QLPSIPPAVNKKRLIQKAVFDQLVALVDPHAEPFKPKKGKPNVIMMVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q KG+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV ++ EGV FK
Sbjct: 121 LARHYQTKGFKAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVSSEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LFEEM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEDLFEEMTQIQAAIKPDQTIMVLDSTIGQAAETQSAAFKSAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT++P+IF+GTGEHM + E F +PFV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATRTPIIFLGTGEHMLDLERFAPQPFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+ ++ + V E + +SEG FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 301 ASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN- 359
Query: 360 LMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 417
+ G + E + K++R + + DSMT ELD ++ +RI+R+A GSG VREV +
Sbjct: 360 -ITSGLDDEDGSLKLRRMIYIFDSMTAPELDGDGKVFVDQPTRIVRLACGSGTTVREVED 418
Query: 418 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVG 471
+L ++K +A + K+ G K + + L Q M+ + Q + +GG G
Sbjct: 419 LLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGNKEQQMAAM--QKRMAAMGGAG 470
>gi|406606416|emb|CCH42190.1| Signal recognition particle subunit SRP54 [Wickerhamomyces
ciferrii]
Length = 533
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/436 (49%), Positives = 316/436 (72%), Gaps = 4/436 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ + +++ ++ L EI ALL++DV KLV +++ +IK +
Sbjct: 1 MVLVDLGRRINTAVSGAIKSNEVNDDAIDLMLKEICNALLESDVNVKLVVKLRKDIKHKL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N + G NK+++IQ+ +F+ELC+++D + PKKGK +VIMFVGLQG+GKTT+CTK
Sbjct: 61 NAEGEKPGINKKKLIQKVVFDELCRLVDTETEPYKPKKGKSNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y+Q++G+K LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE++PV+++ +GV+ FK
Sbjct: 121 LAVYYQRRGFKVGLVCADTFRAGAFDQLKQNATKARIPFYGSYTETNPVKVSKDGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF+EM ++ EA P+ I V+D+SIGQAA Q++AFK+S
Sbjct: 181 KEKFDIIIVDTSGRHRQEEDLFQEMIEIGEAVEPNQTIMVLDASIGQAAESQSKAFKESS 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ G++I+TK+DGHAKGGGA+SAVAAT +P++FIGTGEH+ +FE F + F+S+LLG+GD
Sbjct: 241 NFGSIILTKLDGHAKGGGAISAVAATNTPIVFIGTGEHVQDFETFSPRSFISKLLGIGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G M+ + + +D + + ++ L EG FTL +Q QNI+KMGP+ Q+ +M+PG L
Sbjct: 301 QGLMEHVQS-LDLDNK-DTMKNLQEGKFTLNDFQKQMQNIMKMGPLSQIANMIPGMGQML 358
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
G E E+ K+KR + +MDSMT +ELDS +N+ +RI+R+A+GSG EV +L
Sbjct: 359 GQVG-EDEASNKMKRMVYIMDSMTKKELDSDGQIFINEPTRIIRVAQGSGTSATEVEMIL 417
Query: 420 EEYKRLAKIWSKMKGL 435
+ + +A + + KG+
Sbjct: 418 MQQRMMATMAQRTKGM 433
>gi|389628338|ref|XP_003711822.1| signal recognition particle protein [Magnaporthe oryzae 70-15]
gi|351644154|gb|EHA52015.1| signal recognition particle protein [Magnaporthe oryzae 70-15]
Length = 510
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/436 (51%), Positives = 316/436 (72%), Gaps = 12/436 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK +I ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKA------KICAALLEADVNVRLVGQLRKSIKSTV 54
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL ++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 55 NFKELPPAVNKKRLIQKAVFDELVSLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 114
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGV+ FK
Sbjct: 115 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAREGVDKFK 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM + +A PD I V+D+SIGQ A QA+AFK++
Sbjct: 175 KERFEVIIVDTSGRHRQESALFQEMMDIQKAVKPDETIMVLDASIGQQAEAQAKAFKEAA 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + F+S+LLGMGD
Sbjct: 235 DFGAIIITKTDGHASGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFISKLLGMGDM 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + + +DQ+ + ++ ++EG FT+R + +Q QNI+KMGP+ ++ M+PG S+ +
Sbjct: 295 AGLVEHVQS-LKLDQK-DTIKHITEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMSN-M 351
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND--SRIMRIARGSGRQVREVMEM 418
M ++E K+KR + + DSMT++ELD S+ K+ + +R+ R+ARGSG VREV ++
Sbjct: 352 MQGMDDEEGTGKLKRMIYICDSMTDKELD-SDGKIFTEQPTRMTRVARGSGTHVREVEDL 410
Query: 419 LEEYKRLAKIWSKMKG 434
L + + +A + KM G
Sbjct: 411 LTQQRMMAGMAKKMGG 426
>gi|58267554|ref|XP_570933.1| Signal recognition particle 54 kDa protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|134112227|ref|XP_775089.1| hypothetical protein CNBE3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257741|gb|EAL20442.1| hypothetical protein CNBE3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227167|gb|AAW43626.1| Signal recognition particle 54 kDa protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 591
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/481 (48%), Positives = 329/481 (68%), Gaps = 25/481 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI- 59
MVLA LG + A Q+S A++ID+KV++ L E+ ALL++DV KLV ++T +K
Sbjct: 1 MVLADLGTRLHGAWNQLSKASVIDDKVIDGVLKELCAALLESDVNVKLVASLRTKVKTKV 60
Query: 60 ---VNLDDLAAGH--NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
+ + A G NK+ ++Q+A+F+EL ++DPG + P KGK +V+M VG+QG+GK
Sbjct: 61 KKSLEESEKAGGREANKKNVVQKAVFDELVALVDPGTEPYKPVKGKTNVLMAVGIQGAGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV IA
Sbjct: 121 TTTCTKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVAIASL 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GVE F+KE D+IIVDTSGRHKQE+ LFEEM + A PD+ + V+D+SIGQAA Q++
Sbjct: 181 GVEKFRKERFDVIIVDTSGRHKQESELFEEMVAIGAAVKPDMTLMVLDASIGQAAEGQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEH+++ E F +PF+S+L
Sbjct: 241 AFKDSADFGAIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHLNDLERFAPQPFISKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
LGMGD G ++ + ++ D+Q +L +KL +G FT+R EQ NI+ MG I ++ SM
Sbjct: 301 LGMGDMQGLVEHMQDMARANPDRQKDLAKKLEQGKFTIRDWREQLSNIMNMGSISKIASM 360
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSS-----------NPKLMNDSRI 401
+PG + +M G E+E+ AK+KR + + D+M +ELDS NP +N R
Sbjct: 361 IPGLPAGIM-DGNEEEASAKLKRLIFITDAMRADELDSDGSIFVSYDKQGNPVGLN-KRA 418
Query: 402 MRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQ 461
R+A+GSG +RE+ ++L + + +A + + G + G MSA+ + A + P
Sbjct: 419 KRVAKGSGTSLRELEDLLVQARMMAGMAKQAGG----QNGWMSAMQKMQAAAGGKPLGPN 474
Query: 462 G 462
G
Sbjct: 475 G 475
>gi|223993863|ref|XP_002286615.1| SRP54, signal recognition particle 54 kDa protein 2-like protein
[Thalassiosira pseudonana CCMP1335]
gi|220977930|gb|EED96256.1| SRP54, signal recognition particle 54 kDa protein 2-like protein
[Thalassiosira pseudonana CCMP1335]
Length = 451
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/451 (49%), Positives = 318/451 (70%), Gaps = 20/451 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNAT--IIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKK 58
MVLA+LGG + +++++ + + I + LN L+EI+RAL+++DV KLV +++NI+K
Sbjct: 1 MVLAELGGKLRDSLRKLQSPSGDAITAETLNGILSEISRALIESDVNVKLVMTLRSNIQK 60
Query: 59 IVN-------LDDLAAGHNKRRIIQQAIFNELCKMLDP----GKPSFTPKKGKPSVIMFV 107
V + A N R++Q+A+ +EL ML P ++ K+GKP++I+FV
Sbjct: 61 KVGALVSSDNANSAANNANIARLVQRAVVDELTSMLTPNGENATKAYVMKRGKPNIILFV 120
Query: 108 GLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD 167
GLQG+GKTT+ KYA+Y+Q+KGWK A+VCADTFRAGAFDQLKQNATK +IPFYGSYTE+D
Sbjct: 121 GLQGAGKTTSIAKYAHYYQRKGWKTAMVCADTFRAGAFDQLKQNATKLRIPFYGSYTEAD 180
Query: 168 PVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQ 227
PV IA EGVE F + ++IIVDTSGRH+QE LFEEM+++S A PD IFVMD++ GQ
Sbjct: 181 PVLIAEEGVERFISDGYEIIIVDTSGRHRQEETLFEEMQEISAAVRPDNTIFVMDATQGQ 240
Query: 228 AAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDV 287
A +DQA AF +V+VG+VIVTK+DGHAKGGGALSAV+AT SP++F+G+GE ++ + F+
Sbjct: 241 AVYDQALAFHGAVNVGSVIVTKLDGHAKGGGALSAVSATGSPIVFLGSGERFEDLDPFNA 300
Query: 288 KPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIG 347
K FVS+LLG GD G M+++ + Q EL++ + +G FTLR MY+QFQ ++K+GP+
Sbjct: 301 KSFVSKLLGFGDVRGLMEEMKSLNSDKNQEELMKNMQKGQFTLRDMYKQFQQVMKIGPLN 360
Query: 348 QVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELD------SSNPKLMNDSRI 401
+V MLPG LMP+ + ES +++++M MMDSM + ELD + N K + + RI
Sbjct: 361 KVMGMLPGMPEYLMPQNGDDESTNRLRKFMYMMDSMNDAELDGKIDLHAKNDKSV-EKRI 419
Query: 402 MRIARGSGRQVREVMEMLEEYKRLAKIWSKM 432
RIA GSG EV +L+ +K+ + SKM
Sbjct: 420 NRIAAGSGTHPTEVKMLLQAHKQFEGMVSKM 450
>gi|358392739|gb|EHK42143.1| hypothetical protein TRIATDRAFT_31697 [Trichoderma atroviride IMI
206040]
Length = 519
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/435 (51%), Positives = 307/435 (70%), Gaps = 11/435 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK EI ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSNLTREQNLDEK-------EICAALLEADVNVRLVGQLRKSIRGAV 53
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 54 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 113
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G + LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 114 LARHYQSRGLRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVEQFK 173
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ D+IIVDTSGRH+QE+ALF+EM + A NPD I V+D+SIGQ A QA+AFK++
Sbjct: 174 KDKFDVIIVDTSGRHRQESALFQEMIDIQAAVNPDETIMVLDASIGQQAESQAKAFKEAA 233
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F+ + FV +LLGMGD
Sbjct: 234 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFEPQRFVQKLLGMGDM 293
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+G ++ + + Q + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S L
Sbjct: 294 AGLVEHVQSLNL--NQKDTMKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG-L 350
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E K+KR + + DSMT++ELDS +++ +R+ RIARGSG VREV ++L
Sbjct: 351 MQGMDDEEGGLKLKRMIYICDSMTDKELDSDGKMFIDEPTRMTRIARGSGTSVREVEDLL 410
Query: 420 EEYKRLAKIWSKMKG 434
+ + +A + KM G
Sbjct: 411 TQQRMMAGMAKKMGG 425
>gi|303319737|ref|XP_003069868.1| signal recognition particle protein, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240109554|gb|EER27723.1| signal recognition particle protein, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 530
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/438 (50%), Positives = 300/438 (68%), Gaps = 3/438 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEKV + L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNDLDEKVFDSMLKEICAALLSADVNVRLVQNLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N + NK+R+IQ+A+F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSIPPAVNKKRLIQKAVFDQLVALVDPHSEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A +GV FK
Sbjct: 121 LARHYQTRGFKSALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAADGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DSSIGQAA Q+ AFK +
Sbjct: 181 KEKFEVIIVDTSGRHKQEEDLFAEMTQIQNAVKPDQTILVLDSSIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+ ++ + V E + +SEG FTLR E +I+KMGP+ ++ SM+PG S
Sbjct: 301 ASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSG- 359
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 418
L +++ K++R + + DSMT ELD ++ SRI+R+A GSG VREV ++
Sbjct: 360 LTAGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFVDQPSRIVRVACGSGTTVREVEDL 419
Query: 419 LEEYKRLAKIWSKMKGLK 436
L ++K +A + K+ G K
Sbjct: 420 LSQHKMMAGMAKKVGGQK 437
>gi|308808356|ref|XP_003081488.1| signal recognition particle 54kDa subunit (ISS) [Ostreococcus
tauri]
gi|116059951|emb|CAL56010.1| signal recognition particle 54kDa subunit (ISS) [Ostreococcus
tauri]
Length = 559
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/541 (44%), Positives = 330/541 (60%), Gaps = 63/541 (11%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG +I+ A++++ +ID+ ++ L EI ALL ADV LV ++ N+ + V
Sbjct: 1 MVLNDLGNTITGALRRLQTRVVIDDDAVDGALKEICNALLSADVAVGLVVRLKKNVMRAV 60
Query: 61 NLDDL--AAGHNKRRIIQQAIFNELCKMLDPG---------------------------- 90
+ A G RR +++A+F EL +L+ G
Sbjct: 61 ETERASDAGGTRTRRTLERAVFKELANLLNGGGREDDQETPVSGPXXXXXXXKGSRAIGG 120
Query: 91 -------------KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCA 137
P + PKKGK +V+MFVGLQG+GKTTTCTK+A+Y+ +KG+K ALVCA
Sbjct: 121 KRGREGGRRGEGNAPRWAPKKGKRNVVMFVGLQGAGKTTTCTKFAHYYARKGFKAALVCA 180
Query: 138 DTFRAGAFDQLKQNATKAKIPFYGSYTESD----------------PVRIAVEGVETFKK 181
DTFRAGAFD PF + D P +IA V F++
Sbjct: 181 DTFRAGAFDXXXXXXXVRPGPFGPVEPKRDQRPKIPVLRLVHPRAMPAKIARGWVARFEE 240
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E DLIIVDTSGRH+QE ALFEEMR+++ T+P + IFVMDSSIGQ+A DQA AF +V
Sbjct: 241 EKMDLIIVDTSGRHRQEEALFEEMREIANVTDPTMTIFVMDSSIGQSAADQANAFASTVD 300
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG VI+TK+DGHAKGGGA+SAV+ TK+P++FIGTGEH+ E E FD FVS+LLGMGD
Sbjct: 301 VGGVIMTKLDGHAKGGGAISAVSETKAPILFIGTGEHIGEMEPFDANSFVSKLLGMGDMK 360
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
G ++K+ E+VP + L + G FT+R++YEQFQN+ MGPI + SM+PG +++M
Sbjct: 361 GLVEKMTEIVPEESAERLADAIGSGTFTMRLLYEQFQNLQNMGPISSLMSMVPGM-ADMM 419
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
PKG E+E ++K M +MDSMT+ ELD+ N K+ + R+ R+ARG+GR E++ +LEE
Sbjct: 420 PKGSEQEGTKRMKWMMVLMDSMTDAELDAPNSKIFDAKRMERVARGAGRSPHEMITLLEE 479
Query: 422 YKRLAKIWSKMKGLKIPK---KGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMK 478
+KRL K+ KMKG+K P +G + M+ LP ML+ +GG GGLQN+MK
Sbjct: 480 HKRLGKMMGKMKGMKFPSGNARGRGNPQQMQQQMAQMANALPPDMLRMMGGAGGLQNMMK 539
Query: 479 Q 479
Q
Sbjct: 540 Q 540
>gi|119183283|ref|XP_001242701.1| hypothetical protein CIMG_06597 [Coccidioides immitis RS]
gi|392865609|gb|EAS31408.2| signal recognition particle protein SRP54 [Coccidioides immitis RS]
Length = 530
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/438 (50%), Positives = 300/438 (68%), Gaps = 3/438 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEKV + L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNDLDEKVFDSMLKEICAALLSADVNVRLVQNLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N + NK+R+IQ+A+F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSIPPAVNKKRLIQKAVFDQLVALVDPHTEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A +GV FK
Sbjct: 121 LARHYQTRGFKSALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAADGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DSSIGQAA Q+ AFK +
Sbjct: 181 KEKFEVIIVDTSGRHKQEEDLFAEMTQIQNAVKPDQTILVLDSSIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+ ++ + V E + +SEG FTLR E +I+KMGP+ ++ SM+PG S
Sbjct: 301 ASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSG- 359
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 418
L +++ K++R + + DSMT ELD ++ SRI+R+A GSG VREV ++
Sbjct: 360 LTAGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFVDQPSRIVRVACGSGTTVREVEDL 419
Query: 419 LEEYKRLAKIWSKMKGLK 436
L ++K +A + K+ G K
Sbjct: 420 LSQHKMMAGMAKKVGGQK 437
>gi|255949096|ref|XP_002565315.1| Pc22g13910 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592332|emb|CAP98679.1| Pc22g13910 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 522
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/439 (50%), Positives = 303/439 (69%), Gaps = 5/439 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV ++ +IK V
Sbjct: 1 MVLQDLGRRINSAVNDLTRSNNLDEKAFDDMLKEICAALLSADVNVRLVGTLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L A NK+R+IQ+ +F+EL K++DP SF PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPAAVNKKRLIQKTVFDELVKLVDPHADSFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPRAFVQKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+G ++ + + E + ++EG +TLR E +I+KMGP+ ++ M+PG S+
Sbjct: 301 AGLVEHVQAMTKDSAGAKETYKHIAEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSN- 359
Query: 360 LMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 417
M +G + E + K++R + + DSMT ELD + SR++RIA GSG VREV +
Sbjct: 360 -MTQGLDDEDGSLKLRRMVYIFDSMTVAELDGDGKNFVEQPSRMVRIAHGSGTTVREVED 418
Query: 418 MLEEYKRLAKIWSKMKGLK 436
+L +++ +A + ++ G K
Sbjct: 419 LLSQHRMMAGMAKRVGGQK 437
>gi|212535310|ref|XP_002147811.1| signal recognition particle protein SRP54 [Talaromyces marneffei
ATCC 18224]
gi|210070210|gb|EEA24300.1| signal recognition particle protein SRP54 [Talaromyces marneffei
ATCC 18224]
Length = 537
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/436 (49%), Positives = 302/436 (69%), Gaps = 3/436 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNTLDEKAFDDMLKEICSALLSADVNVRLVQNLRKSIKHSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L + NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSLPSAVNKKRLIQKAVFDELVALVNPHADPFKPKKGRVNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNA KAKIP+YGS T++DPV +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNAIKAKIPYYGSLTQTDPVVVAAEGVAQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE LFEEM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFEEMTQIQNAVRPDQTILVLDSTIGQAAEAQSSAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+G ++ + + E + +SEG +T+R E +I+KMGP+ ++ M+PG S+
Sbjct: 301 AGLVEHVQAITKDSAGAKETYKHISEGIYTIRDFRENITSIMKMGPLSKISGMIPGLSN- 359
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 418
+ +++ K++R + + DSMT ELDS + SRI+R+A GSG VREV ++
Sbjct: 360 ITAGLDDEDGTMKLRRMIYLFDSMTTAELDSDGKLFVEQPSRIVRVACGSGTTVREVEDL 419
Query: 419 LEEYKRLAKIWSKMKG 434
L +++ +A + ++ G
Sbjct: 420 LSQHRMMAGMAKRVGG 435
>gi|296817061|ref|XP_002848867.1| signal recognition particle protein [Arthroderma otae CBS 113480]
gi|238839320|gb|EEQ28982.1| signal recognition particle protein [Arthroderma otae CBS 113480]
Length = 535
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/438 (50%), Positives = 303/438 (69%), Gaps = 3/438 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK L+ + EI ALL ADV +LV++++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNTVDEKALDAMIKEICAALLSADVNVRLVQQLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + NK+R+IQ+A+F++L ++DP F PKKGK +VIM VGLQG+GKTTTCTK
Sbjct: 61 QLPSIPPAVNKKRLIQKAVFDQLVALVDPHAEPFKPKKGKSNVIMMVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q KG+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV ++ EGV FK
Sbjct: 121 LARHYQTKGFKAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVIVSSEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEDLFAEMTQIQAAIKPDQTIMVLDSTIGQAAESQSAAFKSAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT++P+IF+GTGEHM + E F +PF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATRTPIIFLGTGEHMLDLERFAPQPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+ ++ + V E + +SEG FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 301 ASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN- 359
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 418
L +++ K++R + + DSMT ELD ++ +RI+R+A GSG VREV ++
Sbjct: 360 LTSGLDDEDGSLKLRRMIYIFDSMTASELDGDGKVFIDQPTRIVRLACGSGTTVREVEDL 419
Query: 419 LEEYKRLAKIWSKMKGLK 436
L ++K +A + K+ G K
Sbjct: 420 LSQHKMMAGMAKKVGGQK 437
>gi|327294833|ref|XP_003232112.1| signal recognition particle 54K protein [Trichophyton rubrum CBS
118892]
gi|326466057|gb|EGD91510.1| signal recognition particle 54K protein [Trichophyton rubrum CBS
118892]
Length = 534
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/474 (48%), Positives = 317/474 (66%), Gaps = 7/474 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK L+ + EI ALL ADV +LV++++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNAVDEKALDAMIKEICAALLSADVNVRLVQQLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + NK+R+IQ+A+F++L ++DP F PKKGK +VIM VGLQG+GKTTTCTK
Sbjct: 61 QLPSIPPAVNKKRLIQKAVFDQLVALVDPHAEPFKPKKGKSNVIMMVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q KG+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV ++ EGV FK
Sbjct: 121 LARHYQTKGFKAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVSSEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEDLFAEMTQIQSAIKPDQTIMVLDSTIGQAAETQSAAFKSAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT++P+IF+GTGEHM + E F +PFV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATRTPIIFLGTGEHMLDLERFAPRPFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+ ++ + V E + +SEG FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 301 ASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN- 359
Query: 360 LMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 417
+ G + E + K++R + + DSMT ELD ++ +R++R+A GSG VREV +
Sbjct: 360 -ITSGLDDEDGSLKLRRMIYIFDSMTASELDGDGKVFIDQPTRVVRLACGSGTTVREVED 418
Query: 418 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVG 471
+L ++K +A + K+ G K + + L Q M+ + Q + +GG G
Sbjct: 419 LLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGNKEQQMAAM--QKRMAAMGGAG 470
>gi|320034158|gb|EFW16103.1| signal recognition particle protein SRP54 [Coccidioides posadasii
str. Silveira]
Length = 530
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/438 (50%), Positives = 300/438 (68%), Gaps = 3/438 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEKV + L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNDLDEKVFDSMLKEICAALLSADVNVRLVQNLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N + NK+R+IQ+A+F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSIPPAVNKKRLIQKAVFDQLVALVDPHSEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A +GV FK
Sbjct: 121 LARHYQTRGFKSALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAADGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DSSIGQAA Q+ AFK +
Sbjct: 181 KEKFEVIIVDTSGRHKQEEDLFAEMTQIQNAVKPDQTILVLDSSIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+ ++ + V E + ++EG FTLR E +I+KMGP+ ++ SM+PG S
Sbjct: 301 ASLVEHVQAVTKDSAGAKETYKHIAEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSG- 359
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 418
L +++ K++R + + DSMT ELD ++ SRI+R+A GSG VREV ++
Sbjct: 360 LTAGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFVDQPSRIVRVACGSGTTVREVEDL 419
Query: 419 LEEYKRLAKIWSKMKGLK 436
L ++K +A + K+ G K
Sbjct: 420 LSQHKMMAGMAKKVGGQK 437
>gi|242792738|ref|XP_002482016.1| signal recognition particle protein SRP54 [Talaromyces stipitatus
ATCC 10500]
gi|218718604|gb|EED18024.1| signal recognition particle protein SRP54 [Talaromyces stipitatus
ATCC 10500]
Length = 534
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/436 (50%), Positives = 301/436 (69%), Gaps = 3/436 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNTVDEKAFDDMLKEICSALLSADVNVRLVQSLRKSIKHNV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L + NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSLPSAVNKKRLIQKAVFDELVALVNPHAEPFKPKKGRVNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNA KAKIP+YGS T++DPV +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNAIKAKIPYYGSLTQTDPVVVAAEGVAQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE LFEEM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFEEMTQIQNAVRPDQTILVLDSTIGQAAEAQSSAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+G ++ + + E + +S G +TLR E +I+KMGP+ ++ M+PG S+
Sbjct: 301 AGLVEHVQAITKDSAGAKETYKHISAGIYTLRDFRENITSIMKMGPLSKISGMIPGLSN- 359
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 418
+ +++ K++R + + DSMT ELDS + SRI+RIA GSG VREV ++
Sbjct: 360 ITAGLDDEDGTMKLRRMIYLFDSMTTAELDSDGKIFVEQPSRIVRIACGSGTTVREVEDL 419
Query: 419 LEEYKRLAKIWSKMKG 434
L +++ +A + ++ G
Sbjct: 420 LSQHRMMAGMAKRVGG 435
>gi|326469041|gb|EGD93050.1| signal recognition particle 54K protein [Trichophyton tonsurans CBS
112818]
Length = 534
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/474 (48%), Positives = 317/474 (66%), Gaps = 7/474 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK L+ + EI ALL ADV +LV++++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNAVDEKALDAMIKEICAALLSADVNVRLVQQLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + NK+R+IQ+A+F++L ++DP F PKKGK +VIM VGLQG+GKTTTCTK
Sbjct: 61 QLPSIPPAVNKKRLIQKAVFDQLVALVDPHAEPFKPKKGKSNVIMMVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q KG+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV ++ EGV FK
Sbjct: 121 LARHYQTKGFKAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVSSEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEDLFTEMTQIQSAIKPDQTIMVLDSTIGQAAETQSAAFKSAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT++P+IF+GTGEHM + E F +PFV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATRTPIIFLGTGEHMLDLERFAPRPFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+ ++ + V E + +SEG FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 301 ASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN- 359
Query: 360 LMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 417
+ G + E + K++R + + DSMT ELD ++ +R++R+A GSG VREV +
Sbjct: 360 -ITSGLDDEDGSLKLRRMIYIFDSMTASELDGDGKVFIDQPTRVVRLACGSGTTVREVED 418
Query: 418 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVG 471
+L ++K +A + K+ G K + + L Q M+ + Q + +GG G
Sbjct: 419 LLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGNKEQQMAAM--QKRMAAMGGAG 470
>gi|326480631|gb|EGE04641.1| signal recognition particle protein [Trichophyton equinum CBS
127.97]
Length = 534
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/474 (47%), Positives = 317/474 (66%), Gaps = 7/474 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK L+ + EI ALL ADV +LV++++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNAVDEKALDAMIKEICAALLSADVNVRLVQQLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + NK+R+IQ+A+F++L ++DP F PKKGK +VIM VGLQG+GKTTTCTK
Sbjct: 61 QLPSIPPAVNKKRLIQKAVFDQLVALVDPHAEPFKPKKGKSNVIMMVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV ++ EGV FK
Sbjct: 121 LARHYQTQGFKAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVSSEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEDLFTEMTQIQSAIKPDQTIMVLDSTIGQAAETQSAAFKSAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT++P+IF+GTGEHM + E F +PFV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATRTPIIFLGTGEHMLDLERFAPRPFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+ ++ + V E + +SEG FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 301 ASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN- 359
Query: 360 LMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 417
+ G + E + K++R + + DSMT ELD ++ +R++R+A GSG VREV +
Sbjct: 360 -ITSGLDDEDGSLKLRRMIYIFDSMTASELDGDGKVFIDQPTRVVRLACGSGTTVREVED 418
Query: 418 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVG 471
+L ++K +A + K+ G K + + L Q M+ + Q + +GG G
Sbjct: 419 LLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGNKEQQMAAM--QKRMAAMGGAG 470
>gi|19075709|ref|NP_588209.1| signal recognition particle subunit Srp54 [Schizosaccharomyces
pombe 972h-]
gi|134887|sp|P21565.1|SRP54_SCHPO RecName: Full=Signal recognition particle 54 kDa protein homolog;
Short=SRP54
gi|5096|emb|CAA35951.1| signal recognition particle [Schizosaccharomyces pombe]
gi|173491|gb|AAA35344.1| signal recognition particle 54 kDa subunit [Schizosaccharomyces
pombe]
gi|4678686|emb|CAB41226.1| signal recognition particle subunit Srp54 [Schizosaccharomyces
pombe]
Length = 522
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/435 (50%), Positives = 319/435 (73%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV A LG ++ A+ S AT ++E++++ L I ALL+ DV +LV+E+++NIKK +
Sbjct: 1 MVFADLGRRLNSALGDFSKATSVNEELVDTLLKNICTALLETDVNVRLVQELRSNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N+ L G N +RI+Q+A+F+ELC ++DP +FTPKKG+PSVIM VGLQGSGKTTTC+K
Sbjct: 61 NVSTLPQGINGKRIVQKAVFDELCSLVDPKVDAFTPKKGRPSVIMMVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q++G K LV ADTFRAGAFDQLKQNA KA++P++GSYTE+DPV IA EGV+ FK
Sbjct: 121 LALHYQRRGLKSCLVAADTFRAGAFDQLKQNAIKARVPYFGSYTETDPVVIAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+IIVDTSGRH+QE LF EM ++S+A PD I ++D+SIGQAA Q++AFK++
Sbjct: 181 NDRFDVIIVDTSGRHQQEQELFAEMVEISDAIRPDQTIMILDASIGQAAESQSKAFKETA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GAVI+TK+DGHAKGGGALSAVAATK+P++FIGTGEH+++ E F + F+S+LLG+GD
Sbjct: 241 DFGAVIITKLDGHAKGGGALSAVAATKTPIVFIGTGEHINDLERFSPRSFISKLLGLGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G M+ + + D++ +++ L +G FT+R +Q NI+K+GP+ ++ SM+PG S+ +
Sbjct: 301 EGLMEHVQS-LDFDKK-NMVKNLEQGKFTVRDFRDQLGNIMKLGPLSKMASMIPGMSN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E ++KR + ++DSMT +ELDS + SR++R+ARGSG V EV E +
Sbjct: 358 MNGMNDEEGSLRMKRMLYIVDSMTEQELDSDGLLFVEQPSRVLRVARGSGTSVLEVEETI 417
Query: 420 EEYKRLAKIWSKMKG 434
+ + A++ K+ G
Sbjct: 418 SQVRVFAQMAKKIGG 432
>gi|430812104|emb|CCJ30440.1| unnamed protein product [Pneumocystis jirovecii]
Length = 515
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/491 (47%), Positives = 331/491 (67%), Gaps = 25/491 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M+L LG IS A+ ++ +DE V N L +I ALL+ DV LV++++ +IKK +
Sbjct: 1 MILGDLGRRISTALTELIKTQTVDESV-NVMLKKICSALLENDVNVDLVQKLRESIKKKI 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ NK+RII + +F+ELCK++D + P+KG ++I+ VGLQGSGKTT+C
Sbjct: 60 EFKKTTSVANKKRIIYKTVFDELCKLVDSSSEPYKPRKGFSNIILMVGLQGSGKTTSC-- 117
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+++QKKG+K L+CADTFRAG+FDQLKQNATKAKIP++GSYTE++PV I+ EGVE FK
Sbjct: 118 LAHFYQKKGFKSCLICADTFRAGSFDQLKQNATKAKIPYFGSYTETNPVSISCEGVEKFK 177
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LFEEM Q+S A P I V+D+SIGQAA Q++AFK+SV
Sbjct: 178 KELFEIIIVDTSGRHRQEKELFEEMVQISNAIKPHQTIMVLDASIGQAAESQSRAFKESV 237
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ GA+++TKMDGHAKGGGALSA++A+K+P++FIGTGEH+ + E F F+S+LLGMGD
Sbjct: 238 NFGAILLTKMDGHAKGGGALSAISASKTPIVFIGTGEHIYDLEKFVPNSFISKLLGMGDI 297
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
GFM+ + ++Q + ++ + +G FT+R + + +I+KMGPI ++ SM+PG +
Sbjct: 298 QGFMEHFQS-LKLEQSKDTIKNIEKGVFTIRDLKDHLGSIMKMGPINKLVSMIPGTAQ-- 354
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M +G E+ES K KR + +MDSMT +ELDS N+ SRI+RIA GSG V EV +L
Sbjct: 355 MMEGIEEESSRKFKRLIYIMDSMTEKELDSDGKIFTNEPSRIIRIAMGSGTSVSEVKGLL 414
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSAL-SRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMK 478
++ +A I K+ GE L ++NMN +LK + +Q ++
Sbjct: 415 SQHHIMAGIAKKV--------GEKGGLKNQNMNPN---------LLKNPQQIASIQKRLQ 457
Query: 479 QMGSTKDMMGM 489
+GS+ + GM
Sbjct: 458 SIGSSSGIPGM 468
>gi|70984902|ref|XP_747957.1| signal recognition particle protein SRP54 [Aspergillus fumigatus
Af293]
gi|66845585|gb|EAL85919.1| signal recognition particle protein SRP54 [Aspergillus fumigatus
Af293]
gi|159126118|gb|EDP51234.1| signal recognition particle protein SRP54 [Aspergillus fumigatus
A1163]
Length = 522
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/438 (50%), Positives = 303/438 (69%), Gaps = 3/438 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSSNLDEKAFDDMLKEICAALLSADVNVRLVQTLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L NK+R+IQ+A+F+EL ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSLPPAVNKKRLIQKAVFDELVALVDPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEVIIVDTSGRHKQEEELFTEMTQIQNAVTPDQTILVLDSTIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEH+ + E F+ K FV +LLGMGD
Sbjct: 241 NFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHLMDLERFEPKAFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+G ++ + V E + ++EG +TLR E +I+KMGP+ ++ M+PG S+
Sbjct: 301 AGLVEHVQAVTKDSAAAKETYKHIAEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSN- 359
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 418
L +++ K++R + + DSMT ELDS + SR++RIA GSG VREV ++
Sbjct: 360 LTAGLDDEDGSLKLRRMVYIFDSMTAAELDSDGKIFVEQPSRMVRIACGSGTTVREVEDL 419
Query: 419 LEEYKRLAKIWSKMKGLK 436
L +++ +A + ++ G K
Sbjct: 420 LSQHRMMAGMAKRVGGQK 437
>gi|156554455|ref|XP_001604233.1| PREDICTED: signal recognition particle 54 kDa protein-like [Nasonia
vitripennis]
Length = 444
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/508 (47%), Positives = 329/508 (64%), Gaps = 82/508 (16%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +S+ATII+E+VLN L EI ALL++DV +LV+ ++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSHATIINEEVLNSMLKEICAALLESDVNIRLVKNLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG ++ P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPVKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ F
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVVIAQEGVDMFI 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QVS A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVSNAVQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFV--------------------------- 273
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G + I ++ P +P + KL L MG I +
Sbjct: 274 -GTGEHIDDLEPFKTKP-FISKL-----------------LGMGDIXXXXXXM------- 307
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 417
A++K+ MT+MDSM + ELDS + KL + RI+R+ARGSG ++V +
Sbjct: 308 ----------ARLKKLMTIMDSMNDSELDSRDGAKLFSKQPGRIVRVARGSGVTEKDVKD 357
Query: 418 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 469
++ +Y + A + KM G+K + K G+M ++N+N Q M+K++ +L Q+GG
Sbjct: 358 LIAQYTKFAAVVKKMGGIKGLFKGGDM---TKNVNPAQMAKLNQQMAKMMDPRVLHQMGG 414
Query: 470 VGGLQNLMKQM-----GSTKDMMGMFGG 492
+ GLQN+M+Q+ G ++MG FGG
Sbjct: 415 MSGLQNMMRQLQQGAAGGLSNLMGGFGG 442
>gi|299117528|emb|CBN75372.1| SRP54, GTPase subunit of the signal recognition particle (Partial)
[Ectocarpus siliculosus]
Length = 507
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/494 (45%), Positives = 331/494 (67%), Gaps = 20/494 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A++++ T++D + + + +I RALL++DV ++V +++ N++
Sbjct: 1 MVLQELGSKLTSALRRLHTDTVVDRETVKAVVGDICRALLESDVNVQMVMKLRKNVE--A 58
Query: 61 NLDDLAA------------GHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVG 108
+ L A +RR IQ+A+ +EL MLDP + +KG+ +V+MFVG
Sbjct: 59 KAESLVAEQQDGGAGGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMRKGRSNVVMFVG 118
Query: 109 LQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDP 168
LQG+GKTTT K+A+Y Q+KGWK A+VCADTFRAGAFDQLKQNATK + PFYGSY+E+DP
Sbjct: 119 LQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADP 178
Query: 169 VRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQA 228
VRIA EGV+ FK+E ++IIVDTSGRHKQE ALF+EM+++ EA PD +MD++ GQA
Sbjct: 179 VRIADEGVQQFKQEKYEVIIVDTSGRHKQEDALFDEMKEIQEAVQPDNTTLIMDATQGQA 238
Query: 229 AFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVK 288
FDQA+AF ++V+VG+VI+TK+DGHAKGGGALSAVAAT SP+ F+G GEH D+ E FD +
Sbjct: 239 VFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQ 298
Query: 289 PFVSRLLGMGDWSGFMDKIHEVVPMDQQP-ELLQKLS-EGNFTLRIMYEQFQNILKMGPI 346
FVSRLLG GD G M +I E P E+++++S +G FTLR +Y+Q + +K+GP+
Sbjct: 299 SFVSRLLGFGDMKGLMRQIQESQEGSGDPKEMMERISNKGKFTLRDLYKQLSSAMKLGPM 358
Query: 347 GQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIAR 406
+V M+PG E+ +Q K+ + +MDSMT++ELD +SR++RIAR
Sbjct: 359 NKVMGMIPGM-GEMAQMANNSTTQGMFKKNLYIMDSMTDDELDGKVDLSQCESRLLRIAR 417
Query: 407 GSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRN--MNAQHMSKVLPQGML 464
GSG +V +L+ +K K++ K+ + L RN + QH++++ P+ ++
Sbjct: 418 GSGTHPDQVRGLLKLHKHFEKVFGKVGKNMKGDASKAKQLQRNPALAKQHLNQMDPK-VV 476
Query: 465 KQIGGVGGLQNLMK 478
+ +GG + ++K
Sbjct: 477 ESLGGRAKVLEIIK 490
>gi|358371589|dbj|GAA88196.1| signal recognition particle 54K protein homolog (SrpA) [Aspergillus
kawachii IFO 4308]
Length = 534
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/438 (49%), Positives = 301/438 (68%), Gaps = 3/438 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMIKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L A NK+R+IQ+A+F+EL ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPAAVNKKRLIQKAVFDELVSLVDPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSSAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+I++GTGEH+ + E F+ K F+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIYLGTGEHLMDLERFEPKAFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+G ++ + V E + +SEG +TLR E +I+KMGP+ ++ M+PG S+
Sbjct: 301 AGLVEHVQAVTKDSASAKETYKHISEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSN- 359
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 418
L +++ K++R + + DSMT ELD + SR++RIA GSG VREV ++
Sbjct: 360 LTAGLDDEDGSMKLRRMIYIFDSMTAAELDGDGKNFVEQPSRMVRIACGSGTTVREVEDL 419
Query: 419 LEEYKRLAKIWSKMKGLK 436
L +++ +A + ++ G K
Sbjct: 420 LSQHRMMAGMAKRVGGQK 437
>gi|425773702|gb|EKV12037.1| Signal recognition particle protein SRP54 [Penicillium digitatum
Pd1]
gi|425776013|gb|EKV14252.1| Signal recognition particle protein SRP54 [Penicillium digitatum
PHI26]
Length = 523
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/439 (49%), Positives = 303/439 (69%), Gaps = 5/439 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV ++ +IK V
Sbjct: 1 MVLQDLGRRINSAVNDLTRSNNLDEKAFDDMLKEICAALLSADVNVRLVGTLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L A NK+R+IQ+ +F+EL K++DP SF PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPAAVNKKRLIQKTVFDELVKLVDPRADSFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFKTALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF EM Q+ A PD I V+DS+IGQ+A Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEELFTEMTQIQTAVTPDQTILVLDSTIGQSAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPRAFVQKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+G ++ + + E + ++EG +TLR E +I+KMGP+ ++ M+PG S+
Sbjct: 301 AGLVEHVQAMTKDSAGAKETYKHIAEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSN- 359
Query: 360 LMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 417
M +G + E + K++R + + DSMT ELD + SR++RIA GSG VREV +
Sbjct: 360 -MTQGLDDEDGSLKLRRMVYIFDSMTVAELDGDGKNFVEQPSRMVRIAHGSGTTVREVED 418
Query: 418 MLEEYKRLAKIWSKMKGLK 436
+L +++ +A + ++ G K
Sbjct: 419 VLSQHRMMAGMAKRVGGQK 437
>gi|115433004|ref|XP_001216639.1| signal recognition particle 54 kDa protein [Aspergillus terreus
NIH2624]
gi|114189491|gb|EAU31191.1| signal recognition particle 54 kDa protein [Aspergillus terreus
NIH2624]
Length = 526
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/438 (49%), Positives = 301/438 (68%), Gaps = 3/438 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMLKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L + NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPSAVNKKRLIQKAVFDELVALVNPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+G ++ + V E + +SEG +TLR E +I+KMGP+ ++ M+PG S+
Sbjct: 301 AGLVEHVQAVTKDSAAAKETYKHISEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSN- 359
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 418
L +++ K++R + + DSMT ELD + SR++RIA GSG VREV ++
Sbjct: 360 LTAGLDDEDGSMKLRRMIYIFDSMTASELDGDGKVFVEQPSRMVRIACGSGTTVREVEDL 419
Query: 419 LEEYKRLAKIWSKMKGLK 436
L +++ +A + ++ G K
Sbjct: 420 LSQHRMMAGMAKRVGGQK 437
>gi|226739|prf||1604366A signal recognition particle 54kD protein
Length = 522
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/435 (50%), Positives = 318/435 (73%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV A LG ++ A+ S AT ++E++++ L I ALL+ DV +LV+E+++NIKK +
Sbjct: 1 MVFADLGRRLNSALGDFSKATSVNEELVDTLLKNICTALLETDVNVRLVQELRSNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N+ L G N +RI+Q+A+F+ELC ++DP +FTPKKG+PSVIM VGLQGSGKTTTC+K
Sbjct: 61 NVSTLPQGINGKRIVQKAVFDELCSLVDPKVDAFTPKKGRPSVIMMVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q++G K LV ADTFRAGAFDQLKQNA KA++P++GSYTE+DPV IA EGV+ FK
Sbjct: 121 LALHYQRRGLKSCLVAADTFRAGAFDQLKQNAIKARVPYFGSYTETDPVVIAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+IIVDTSGRH+QE LF EM ++S+A PD I ++D+SIGQAA Q++AFK++
Sbjct: 181 NDRFDVIIVDTSGRHQQEQELFAEMVEISDAIRPDQTIMILDASIGQAAESQSKAFKETA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GAVI+TK+DGHAKGGGALSAVAATK+P++FIGTGEH+++ E F + F+S+LLG+GD
Sbjct: 241 DFGAVIITKLDGHAKGGGALSAVAATKTPIVFIGTGEHINDLERFSPRSFISKLLGLGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G M+ + + D++ +++ L +G FT+R +Q NI+K+GP+ ++ SM+PG S+ +
Sbjct: 301 EGLMEHVQS-LDFDKK-NMVKNLEQGKFTVRDFRDQLGNIMKLGPLSKMASMIPGMSN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E ++KR + ++DSM +ELDS + SR++R+ARGSG V EV E +
Sbjct: 358 MNGMNDEEGSLRMKRMLYIVDSMIEQELDSDGLLFVEQPSRVLRVARGSGTSVLEVEETI 417
Query: 420 EEYKRLAKIWSKMKG 434
+ + A++ K+ G
Sbjct: 418 SQVRVFAQMAKKIGG 432
>gi|238503263|ref|XP_002382865.1| signal recognition particle protein SRP54 [Aspergillus flavus
NRRL3357]
gi|220691675|gb|EED48023.1| signal recognition particle protein SRP54 [Aspergillus flavus
NRRL3357]
Length = 527
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/438 (49%), Positives = 301/438 (68%), Gaps = 3/438 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMLKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPPAVNKKRLIQKAVFDELVALVNPHADPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+G ++ + V E + +SEG +T+R E +I+KMGP+ ++ M+PG S+
Sbjct: 301 AGLVEHVQAVTKDSAAAKETYKHISEGIYTVRDFRENISSIMKMGPLSKLSGMIPGLSN- 359
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 418
L +++ K++R + + DSMT ELDS + SR++RIA GSG VREV ++
Sbjct: 360 LTAGLDDEDGSLKLRRMIYIFDSMTTAELDSDGKVFVEQPSRMVRIACGSGTTVREVEDL 419
Query: 419 LEEYKRLAKIWSKMKGLK 436
L +++ +A + ++ G K
Sbjct: 420 LSQHRMMAGMAKRVGGQK 437
>gi|169776553|ref|XP_001822743.1| signal recognition particle protein [Aspergillus oryzae RIB40]
gi|83771478|dbj|BAE61610.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 527
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/438 (49%), Positives = 301/438 (68%), Gaps = 3/438 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMLKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPPAVNKKRLIQKAVFDELVALVNPHADPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMD-QQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+G ++ + V E + +SEG +T+R E +I+KMGP+ ++ M+PG S+
Sbjct: 301 AGLVEHVQAVTKDSVAAKETYKHISEGIYTVRDFRENISSIMKMGPLSKLSGMIPGLSN- 359
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 418
L +++ K++R + + DSMT ELDS + SR++RIA GSG VREV ++
Sbjct: 360 LTAGLDDEDGSLKLRRMIYIFDSMTTAELDSDGKVFVEQPSRMVRIACGSGTTVREVEDL 419
Query: 419 LEEYKRLAKIWSKMKGLK 436
L +++ +A + ++ G K
Sbjct: 420 LSQHRMMAGMAKRVGGQK 437
>gi|440463596|gb|ELQ33166.1| signal recognition particle 54 kDa protein [Magnaporthe oryzae Y34]
gi|440479190|gb|ELQ59973.1| signal recognition particle 54 kDa protein [Magnaporthe oryzae
P131]
Length = 491
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/405 (52%), Positives = 301/405 (74%), Gaps = 6/405 (1%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
L EI ALL+ADV +LV +++ +IK VN +L NK+R+IQ+A+F+EL ++DP
Sbjct: 7 LKEICAALLEADVNVRLVGQLRKSIKSTVNFKELPPAVNKKRLIQKAVFDELVSLVDPHA 66
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F PKKGK +VIMFVGLQG+GKTTTCTK A ++Q +G+K LVCADTFRAGAFDQLKQN
Sbjct: 67 EPFKPKKGKSNVIMFVGLQGAGKTTTCTKLARHYQSRGFKACLVCADTFRAGAFDQLKQN 126
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS TE+DP +A EGV+ FKKE ++IIVDTSGRH+QE+ALF+EM + +A
Sbjct: 127 ATKAKIPYYGSLTETDPAVVAREGVDKFKKERFEVIIVDTSGRHRQESALFQEMMDIQKA 186
Query: 212 TNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVI 271
PD I V+D+SIGQ A QA+AFK++ GA+I+TK DGHA GGGA+SAVAAT +P++
Sbjct: 187 VKPDETIMVLDASIGQQAEAQAKAFKEAADFGAIIITKTDGHASGGGAISAVAATHTPIV 246
Query: 272 FIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
FIGTGEHM + E F + F+S+LLGMGD +G ++ + + +DQ+ + ++ ++EG FT+R
Sbjct: 247 FIGTGEHMLDLERFAPQQFISKLLGMGDMAGLVEHVQS-LKLDQK-DTIKHITEGIFTIR 304
Query: 332 IMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSS 391
+ +Q QNI+KMGP+ ++ M+PG S+ +M ++E K+KR + + DSMT++ELD S
Sbjct: 305 DLRDQLQNIMKMGPLSKMAGMIPGMSN-MMQGMDDEEGTGKLKRMIYICDSMTDKELD-S 362
Query: 392 NPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKG 434
+ K+ + +R+ R+ARGSG VREV ++L + + +A + KM G
Sbjct: 363 DGKIFTEQPTRMTRVARGSGTHVREVEDLLTQQRMMAGMAKKMGG 407
>gi|317031653|ref|XP_001393946.2| signal recognition particle protein [Aspergillus niger CBS 513.88]
Length = 533
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/438 (49%), Positives = 300/438 (68%), Gaps = 3/438 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMIKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L NK+R+IQ+A+F+EL ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPPAVNKKRLIQKAVFDELVSLVDPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSSAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+I++GTGEH+ + E F+ K F+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIYLGTGEHLMDLERFEPKAFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+G ++ + V E + +SEG +TLR E +I+KMGP+ ++ M+PG S+
Sbjct: 301 AGLVEHVQAVTKDSASAKETYKHISEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSN- 359
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 418
L +++ K++R + + DSMT ELD + SR++RIA GSG VREV ++
Sbjct: 360 LTAGLDDEDGSMKLRRMIYIFDSMTAAELDGDGKMFVEQPSRMVRIACGSGTTVREVEDL 419
Query: 419 LEEYKRLAKIWSKMKGLK 436
L +++ +A + ++ G K
Sbjct: 420 LSQHRMMAGMAKRVGGQK 437
>gi|336364891|gb|EGN93244.1| hypothetical protein SERLA73DRAFT_172158 [Serpula lacrymans var.
lacrymans S7.3]
Length = 566
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/516 (44%), Positives = 330/516 (63%), Gaps = 49/516 (9%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A +S AT++DEKVL+ L EIT ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAAFSSLSRATVVDEKVLDATLKEITAALLESDVNVKLVASLRQKVKVKV 60
Query: 61 N--LD----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
LD D + N++ ++Q+A+F+EL ++DPG + PKKG+ +++M VGLQG+GK
Sbjct: 61 KAALDGGSSDKSKEANRKNLVQKAVFDELVHLVDPGVEPYKPKKGQCNILMAVGLQGNGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVVIAAQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GV FKKE ++IIVDTSGRHKQE+ LF EM Q+ EA P + I ++D+SIGQAA Q++
Sbjct: 181 GVAKFKKERFEVIIVDTSGRHKQESELFREMVQIGEAVKPHMTILILDASIGQAAEAQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+L
Sbjct: 241 AFKDSADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDRFSPQPFISKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
LG+GD G M+ + ++ D+Q E+ +K G GPI ++ SM
Sbjct: 301 LGLGDMQGLMEHMQDLATQNPDKQKEMAKKTRRGETK------------HPGPISKIASM 348
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDS----------RIM 402
+PG EL+ G ++E ++KR + + DSMT+ ELDS M+ S R+
Sbjct: 349 IPGLPQELL-SGSDEEGSLRMKRMIYITDSMTSTELDSDGAVFMDMSKDGKPVGLTWRVT 407
Query: 403 RIARGSGRQVREVMEMLEEYKRLAKI---------W----SKMKGLKIPKKGEMSALSRN 449
R+A+GSG VREV E+L +Y+ +A + W KM+ + + + +
Sbjct: 408 RVAKGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQAMQKMQSIAGGRGRGANGMPTP 467
Query: 450 MNAQHMSKVLPQGMLKQI-----GGVGGLQNLMKQM 480
Q M + +P G L+Q+ G GG+Q ++K M
Sbjct: 468 AQIQAMQRAMPPGALQQMQRQLRSGGGGMQEMLKAM 503
>gi|402077639|gb|EJT72988.1| signal recognition particle protein [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 514
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/410 (51%), Positives = 299/410 (72%), Gaps = 4/410 (0%)
Query: 26 KVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCK 85
+ + + EI ALL+ADV +LV +++ +IK VN +L NK+R+IQ+A+F+EL +
Sbjct: 17 QAFDAMIKEICSALLEADVNVRLVGQLRKSIKSTVNFKELPPAVNKKRLIQKAVFDELVR 76
Query: 86 MLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAF 145
++DP F PKKGK +VIMFVGLQG+GKTTTCTK A ++Q +G++ LVCADTFRAGAF
Sbjct: 77 LVDPHAEPFKPKKGKTNVIMFVGLQGAGKTTTCTKLARHYQTRGFRACLVCADTFRAGAF 136
Query: 146 DQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEM 205
DQLKQNATKAKIP+YGS TE+DP +A +GVE FKKE ++IIVDTSGRH+QE+ALF+EM
Sbjct: 137 DQLKQNATKAKIPYYGSLTETDPAVVARDGVEKFKKERFEVIIVDTSGRHRQESALFQEM 196
Query: 206 RQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAA 265
+ A PD I V+D+SIGQ A QA+AFK++ GA+I+TK DGHA GGGA+SAVAA
Sbjct: 197 MDIQTAVKPDETIMVLDASIGQQAEAQAKAFKEAADFGAIIITKTDGHASGGGAISAVAA 256
Query: 266 TKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSE 325
T +P++FIGTGEHM + E F + F+S+LLGMGD +G ++ + + +DQ+ + ++ ++E
Sbjct: 257 THTPIVFIGTGEHMLDLERFAPQQFISKLLGMGDMAGLVEHVQS-LKLDQK-DTIKHITE 314
Query: 326 GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTN 385
G FT+R + +Q QNI+KMGP+ ++ M+PG S+ +M + E K+KR + + DSMT+
Sbjct: 315 GIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMSN-MMQGMDDDEGTNKLKRMIYICDSMTD 373
Query: 386 EELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKG 434
+ELDS + +R+ R+ARGSG VREV ++L + + +A + KM G
Sbjct: 374 KELDSDGKIFIEQPTRLTRVARGSGTHVREVEDLLTQQRMMAGMAKKMGG 423
>gi|254573270|ref|XP_002493744.1| Signal recognition particle (SRP) subunit (homolog of mammalian
SRP54) [Komagataella pastoris GS115]
gi|238033543|emb|CAY71565.1| Signal recognition particle (SRP) subunit (homolog of mammalian
SRP54) [Komagataella pastoris GS115]
gi|328354432|emb|CCA40829.1| Signal recognition particle subunit SRP54 [Komagataella pastoris
CBS 7435]
Length = 518
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/464 (47%), Positives = 326/464 (70%), Gaps = 8/464 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ ++ + ++D V++ L EI ALL++DV KLV +++ I+K +
Sbjct: 1 MVLADLGRRINNAVGNVTKSNVVDADVISNMLKEICNALLESDVNIKLVAQLREKIRKQI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ +D G NK+++IQ+ +F+EL K++D + F PKK + +VIM VGLQG+GKTTTCT
Sbjct: 61 DAED-KPGINKKKLIQKVVFDELVKLVDCNEAELFKPKKKQTNVIMMVGLQGAGKTTTCT 119
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y+Q++G+K +VC DTFRAGAFDQLKQNATKAKIP+YGSYTE+DPV++ +GVE F
Sbjct: 120 KLAVYYQRRGFKVGMVCGDTFRAGAFDQLKQNATKAKIPYYGSYTETDPVKVTFDGVEEF 179
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+KE ++IIVDTSGRH+QE LFEEM Q+ +A P+ I V+D+SIGQ+A Q++AFK+S
Sbjct: 180 RKEKFEIIIVDTSGRHRQEEDLFEEMVQIGKAIKPNQTIMVLDASIGQSAESQSKAFKES 239
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
GA+I+TKMD ++KGGGALSA+AAT +PV FI TGEH+ FE F + F+S+LLG+GD
Sbjct: 240 SDFGAIIITKMDSNSKGGGALSAIAATNTPVAFIATGEHIQNFEKFSGRGFISKLLGIGD 299
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
G M+ + + +D Q + ++ EG FTL+ Q NI+KMGP+ ++ MLPG +
Sbjct: 300 IEGLMEHVQS-MNLD-QGDTIKNFKEGKFTLQDFQTQLNNIMKMGPLSKLAQMLPGGMGQ 357
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND--SRIMRIARGSGRQVREVME 417
LM + E+E+ ++KR + +MDSMT +EL SS+ +L D SR++R+ARGSG V EV
Sbjct: 358 LMGQVGEEEASKRLKRMIYIMDSMTKQEL-SSDGRLFIDQPSRMVRVARGSGTSVTEVEL 416
Query: 418 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQ 461
+L + K +A++ + K + + G + ++ MN +M + + Q
Sbjct: 417 VLLQQKMMARMALQSKNM-MSGAGGPAGMASKMNPANMRRAMQQ 459
>gi|341882493|gb|EGT38428.1| hypothetical protein CAEBREN_28899 [Caenorhabditis brenneri]
gi|341898754|gb|EGT54689.1| hypothetical protein CAEBREN_29982 [Caenorhabditis brenneri]
Length = 376
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/378 (57%), Positives = 282/378 (74%), Gaps = 16/378 (4%)
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY+E DPV+IA EGVE F K
Sbjct: 2 AYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYSEIDPVKIAAEGVEKFSK 61
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E ++IIVDTSGRHKQEA+LFEEM QVS A PD V+FVMD+SIGQA QA+AF Q+V
Sbjct: 62 EGFEIIIVDTSGRHKQEASLFEEMLQVSNAVQPDNVVFVMDASIGQACEAQARAFSQTVD 121
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
V +VI+TK+D HAKGGGALSAVA TKSPVIFIGTGEH+D+FEVF K FV +LLGMGD +
Sbjct: 122 VASVIITKLDSHAKGGGALSAVAVTKSPVIFIGTGEHIDDFEVFKPKSFVQKLLGMGDIA 181
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
G +D ++++ D + EL+ +L +G FTLR MYEQFQNI+KMGP Q+ SM+PGF E M
Sbjct: 182 GLVDMVNDIGIQDNK-ELVGRLKQGQFTLRDMYEQFQNIMKMGPFSQIMSMIPGFGPEFM 240
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVMEM 418
KG E+ES ++KR MT+MDSM+++ELD + +R+ R+ARGSG +EV ++
Sbjct: 241 TKGNEQESVNRLKRMMTVMDSMSDKELDHPKASELFTKEPNRVARVARGSGSHQQEVRDL 300
Query: 419 LEEYKRLAKIWSK---MKGLKIPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 468
L +YK+ + + K +KGL K G+++ +NMN Q M+K++ +L+Q+G
Sbjct: 301 LAQYKKFSDVVKKIGSIKGLFNGKNGDIN--PKNMNPAKMMQLNQQMAKMMDPRVLQQMG 358
Query: 469 GVGGLQNLMKQMGSTKDM 486
G+GGLQN+M+QM M
Sbjct: 359 GMGGLQNMMQQMARAGKM 376
>gi|156059506|ref|XP_001595676.1| hypothetical protein SS1G_03765 [Sclerotinia sclerotiorum 1980]
gi|154701552|gb|EDO01291.1| hypothetical protein SS1G_03765 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 528
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/425 (51%), Positives = 303/425 (71%), Gaps = 9/425 (2%)
Query: 12 RAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNK 71
R +Q SN +DEK + + EI ALL+ADV +LV ++ +IK VN +LA NK
Sbjct: 16 RILQGSSN---LDEKAFDGMIKEICSALLEADVNVRLVGNLRKSIKASVNFKELAPAVNK 72
Query: 72 RRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWK 131
+++IQ+A+++EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK A ++Q +G+K
Sbjct: 73 KKVIQKAVYDELVKLVDPHAEPFKPKKGKANVIMFVGLQGAGKTTTCTKLARWYQSRGFK 132
Query: 132 PALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDT 191
LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV+ FKKE ++IIVDT
Sbjct: 133 ACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAKEGVDKFKKEKFEIIIVDT 192
Query: 192 SGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 251
SGRH+QE ALF+EM + A PD + V+D+SIGQ A Q++AFK++ GA+I+TK D
Sbjct: 193 SGRHRQEDALFQEMVDIQTAVKPDQTVMVLDASIGQQAEAQSKAFKETADFGAIIITKTD 252
Query: 252 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 311
GHA GGGA+SAVAAT +P++FIGTGEHM + E F FVS+LLGMGD G M+ + +
Sbjct: 253 GHASGGGAISAVAATHTPIVFIGTGEHMLDLEKFAPTQFVSKLLGMGDMQGLMEHVQS-L 311
Query: 312 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 371
+DQ+ + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S M +G + E A
Sbjct: 312 KLDQK-DTMKHIVEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMGS--MMQGMDDEDGA 368
Query: 372 -KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
K+KR + + DSMT +ELDS ++ +R+ RIA GSG VRE+ ++L ++K +A +
Sbjct: 369 MKLKRMIYICDSMTAKELDSDGKMFIDQPTRMTRIACGSGTSVREIEDLLTQHKMMAGMA 428
Query: 430 SKMKG 434
KM G
Sbjct: 429 KKMGG 433
>gi|121718228|ref|XP_001276141.1| signal recognition particle protein SRP54 [Aspergillus clavatus
NRRL 1]
gi|119404339|gb|EAW14715.1| signal recognition particle protein SRP54 [Aspergillus clavatus
NRRL 1]
Length = 524
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/438 (48%), Positives = 300/438 (68%), Gaps = 3/438 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMIKEICAALLSADVNVRLVQTLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSLPPAVNKKRLIQKAVFDELVALVNPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEDLFTEMTQIQNAVTPDQTILVLDSTIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEH+ + E F+ K FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHLMDLERFEPKAFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+G ++ + V E + ++EG +T+R E +I+KMGP+ ++ M+PG S+
Sbjct: 301 AGLVEHVQAVTKDSAAAKETYKHIAEGIYTVRDFRENITSIMKMGPLSKLSGMIPGLSN- 359
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 418
L +++ K++R + + DSMT ELD + SR++R+A GSG VREV ++
Sbjct: 360 LTAGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFVEQPSRMVRVACGSGTTVREVEDL 419
Query: 419 LEEYKRLAKIWSKMKGLK 436
L +++ +A + ++ G K
Sbjct: 420 LSQHRMMAGMAKRVGGQK 437
>gi|429861458|gb|ELA36147.1| signal recognition particle 54 kda protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 501
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/404 (52%), Positives = 295/404 (73%), Gaps = 4/404 (0%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
L EI ALL+ADV +LV +++ +IK VN DL NK+R+IQ+++F+EL K++DP
Sbjct: 2 LKEICAALLEADVNVRLVGQLRKSIKSTVNFKDLPPAVNKKRLIQKSVFDELVKLVDPHA 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F PKKGK ++IMFVGLQG+GKTTTCTK A ++Q +G+K LVCADTFRAGAFDQLKQN
Sbjct: 62 EPFKPKKGKSNIIMFVGLQGAGKTTTCTKLARHYQARGFKACLVCADTFRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS TE+DP +A +GVE FKKE ++IIVDTSGRH+QE ALF+EM + A
Sbjct: 122 ATKAKIPYYGSLTETDPAVVARDGVEKFKKEKFEVIIVDTSGRHRQEEALFQEMVDIQTA 181
Query: 212 TNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVI 271
PD I V+D+SIGQ A QA+AFK++ GA+I+TK DGHA GGGA+SAVAAT +P++
Sbjct: 182 IRPDETIMVLDASIGQQAESQAKAFKEAADFGAIIITKTDGHAHGGGAISAVAATHTPIV 241
Query: 272 FIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
FIGTGEHM + E F + FV +LLGMGD +G ++ + + + +DQ+ + ++ ++EG FT+R
Sbjct: 242 FIGTGEHMLDLERFAPQQFVQKLLGMGDMAGLVEHV-QSLKLDQK-DTIKHITEGIFTVR 299
Query: 332 IMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSS 391
+ +Q NI+KMGP+ ++ M+PG S +M ++E AK+KR + + DSMT++ELDS
Sbjct: 300 DLRDQLSNIMKMGPLSKMAGMIPGMSG-MMQGMDDEEGSAKLKRMIYICDSMTDKELDSD 358
Query: 392 NPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKG 434
+ +R+ R+A GSG VREV ++L + + +A + KM G
Sbjct: 359 GKLFIEQPTRMTRVAHGSGTSVREVEDLLTQQRMMAGMAKKMGG 402
>gi|443926065|gb|ELU44808.1| signal recognition particle protein [Rhizoctonia solani AG-1 IA]
Length = 597
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/535 (44%), Positives = 333/535 (62%), Gaps = 58/535 (10%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A Q+ A ++D+KVL+ L ++ ALL++DV KLV ++ +K
Sbjct: 1 MVLADLGRKLNDAFAQLQRAPVVDDKVLDAILKDVCSALLESDVNVKLVASLRQKVKATA 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N++ ++Q+A+F+EL +++DPG + P KGK +VIM VGLQG+GKT
Sbjct: 61 KAAFEGGADKGKEANRKGVVQKAVFDELVRLVDPGVEPYKPVKGKSNVIMAVGLQGNGKT 120
Query: 116 TTCTKY----AYYHQK--KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV 169
TTCTK H K P + DTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV
Sbjct: 121 TTCTKARTPSHLTHSKLPHTHSPKNIACDTFRAGAFDQTRQSATKAKVAYFGSYTETDPV 180
Query: 170 RIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAA 229
IA +GV FKKE D+IIVDTSGRH+QEA LF+EM Q+ EA PD+ + V+D+SIGQAA
Sbjct: 181 AIASQGVAKFKKERFDVIIVDTSGRHRQEAELFQEMVQIGEAVTPDMTVLVLDASIGQAA 240
Query: 230 FDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289
Q++AFK+S + GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+G GEH+ + + F +P
Sbjct: 241 EAQSRAFKESSNFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGVGEHLTDLDKFSPQP 300
Query: 290 FVSRLLGMGDWSGFMDKIHEVV---PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPI 346
F+S++LGMGD G M+ I ++ P D+ E+ +KL EG ++R EQ N++ MGPI
Sbjct: 301 FISKMLGMGDMQGLMETIQDMAMSNP-DKHKEMAKKLEEGKLSIRDWREQISNVMSMGPI 359
Query: 347 GQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN--------- 397
++ SM+PG +EL+ +G ++E ++KR + + DSMT EELDS +
Sbjct: 360 SKLASMIPGLPAELL-QGGDEEGSRRMKRMLFITDSMTAEELDSDGMIFLERGPDGTPTG 418
Query: 398 -DSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA---- 452
R++R+ARGSG VREV E L +Y+ +A + G K G MSA+ + A
Sbjct: 419 LSRRVLRVARGSGTNVREVEETLTQYRMMANMAKAAGG----KNGWMSAIQKMQQAAGPP 474
Query: 453 ------------QHMSKVLPQGMLKQIGGVGGLQNL--MKQMGSTKDMM-GMFGG 492
M + LP GM LQNL M+Q G K+MM M GG
Sbjct: 475 RGPNGMPTQQQIADMRRALPPGM---------LQNLQKMRQGGGIKEMMRSMMGG 520
>gi|3334345|sp|Q00179.1|SRP54_ASPNG RecName: Full=Signal recognition particle 54 kDa protein homolog
gi|598061|gb|AAB04946.1| srpA [Aspergillus niger]
gi|134078502|emb|CAK40424.1| signal recognition particle 54K protein homolog srpA-Aspergillus
niger
gi|350640222|gb|EHA28575.1| hypothetical protein ASPNIDRAFT_56880 [Aspergillus niger ATCC 1015]
gi|1586559|prf||2204256A srpA gene
Length = 534
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/439 (49%), Positives = 300/439 (68%), Gaps = 4/439 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEK-VLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVL LG I+ A+ ++ + +DEK ++ + EI ALL ADV +LV+ ++ +IK
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKQAFDDMIKEICAALLSADVNVRLVQSLRKSIKSS 60
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
VN L NK+R+IQ+A+F+EL ++DP F PKKG+ +VIMFVGLQG+GKTTTCT
Sbjct: 61 VNFASLPPAVNKKRLIQKAVFDELVSLVDPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCT 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV F
Sbjct: 121 KLARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAAEGVAKF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KKE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KKERFEIIIVDTSGRHKQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSSAFKAT 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
GA+I+TK DGHA GGGA+SAVAAT +P+I++GTGEH+ + E F+ K F+ +LLGMGD
Sbjct: 241 ADFGAIIITKTDGHAAGGGAISAVAATHTPIIYLGTGEHLMDLERFEPKAFIQKLLGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
+G ++ + V E + +SEG +TLR E +I+KMGP+ ++ M+PG S+
Sbjct: 301 MAGLVEHVQAVTKDSASAKETYKHISEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSN 360
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 417
L +++ K++R + + DSMT ELD + SR++RIA GSG VREV +
Sbjct: 361 -LTAGLDDEDGSMKLRRMIYIFDSMTAAELDGDGKMFVEQPSRMVRIACGSGTTVREVED 419
Query: 418 MLEEYKRLAKIWSKMKGLK 436
+L +++ +A + ++ G K
Sbjct: 420 LLSQHRMMAGMAKRVGGQK 438
>gi|67902518|ref|XP_681515.1| SR54_ASPNG SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN HOMOLOG
[Aspergillus nidulans FGSC A4]
gi|40739794|gb|EAA58984.1| SR54_ASPNG SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN HOMOLOG
[Aspergillus nidulans FGSC A4]
gi|259481033|tpe|CBF74199.1| TPA: hypothetical protein similar to srpA gene product (Broad)
[Aspergillus nidulans FGSC A4]
Length = 542
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/446 (49%), Positives = 305/446 (68%), Gaps = 12/446 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVL-------NECLNEITRALLQADVQFKLVREMQ 53
MVL LG I+ A+ ++ + +DEK+L E L EI ALL ADV +LV+ ++
Sbjct: 1 MVLQDLGRRINAAVNDLTRSPNLDEKMLILGVKAFEEMLKEICAALLSADVNVRLVQSLR 60
Query: 54 TNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSG 113
+IK VN L A NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+G
Sbjct: 61 KSIKASVNFASLPAAVNKKRVIQKAVFDELVALVNPHAEPFRPKKGRSNVIMFVGLQGAG 120
Query: 114 KTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAV 173
KTTTCTK A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A
Sbjct: 121 KTTTCTKLARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAA 180
Query: 174 EGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQA 233
EGV FKKE ++IIVDTSGRHKQE LF EM Q+ A PD I V+D +IGQAA Q+
Sbjct: 181 EGVAKFKKERFEIIIVDTSGRHKQEEQLFTEMTQIQTAVTPDQTILVLDGTIGQAAEVQS 240
Query: 234 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 293
AFK + GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+ +
Sbjct: 241 SAFKATADFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQK 300
Query: 294 LLGMGDWSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
LLGMGD +G ++ + V E + ++EG +TLR E +I+KMGP+ ++ M
Sbjct: 301 LLGMGDMAGLVEHVQAVTKDSAAAKETYKHIAEGIYTLRDFRENITSIMKMGPLSKLSGM 360
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND--SRIMRIARGSGR 410
+PG S+ L +++ K++R + + DSM+ ELD S+ K+ + SR++RIA GSG
Sbjct: 361 IPGLSN-LTAGLDDEDGSMKLRRMIYIFDSMSAVELD-SDGKIFDTQPSRMVRIAHGSGT 418
Query: 411 QVREVMEMLEEYKRLAKIWSKMKGLK 436
VREV ++L +++ +A + ++ G K
Sbjct: 419 SVREVEDLLSQHRMMAGMAKRVGGQK 444
>gi|397643867|gb|EJK76129.1| hypothetical protein THAOC_02125 [Thalassiosira oceanica]
Length = 635
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/441 (47%), Positives = 317/441 (71%), Gaps = 16/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNA---TIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK 57
MVLA+LGG + ++ ++ I + L+ L +I AL ++DV+ +LV +++ NI+
Sbjct: 1 MVLAELGGKLRSSLHRLQGGRGDDAITTETLDAVLRDIGEALAESDVRAELVTDLKDNIR 60
Query: 58 K----IVNLDDLAAGHNKRRIIQQAIFNELCKMLDP-GKPSFTP---KKGKPSVIMFVGL 109
+ V+ + ++ N R +Q+A+ +EL ML P G+ S P ++G+P+VI+FVGL
Sbjct: 61 RKVGDAVSENTASSNANLARQVQRAVVDELTSMLTPSGEGSAKPYVMRRGRPNVILFVGL 120
Query: 110 QGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV 169
QG+GKTT+ K+A+++ ++GWK A+VCADTFRAGAFDQLKQNATK ++PFYGSYTE+DPV
Sbjct: 121 QGAGKTTSIAKFAHHYLRRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPV 180
Query: 170 RIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAA 229
IA EGV+ F ++ ++IIVDTSGRH+QE LFEEM+++S A NP IFVMD++ GQA
Sbjct: 181 SIAEEGVDRFVQDGYEVIIVDTSGRHRQEEGLFEEMQEISAAVNPSNTIFVMDATQGQAV 240
Query: 230 FDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289
+DQA+AF +V+VG+VIVTK+DGHA+GGGA+SAVAAT SP++F+G+GE ++ E F+ +
Sbjct: 241 YDQARAFHSAVNVGSVIVTKLDGHARGGGAISAVAATGSPIVFLGSGERFEDLEAFNAQS 300
Query: 290 FVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQV 349
FVS+LLG GD GFM++I + + E+++ +++G FTLR +Y+QFQ++ KMGP+ +V
Sbjct: 301 FVSKLLGFGDMRGFMEEIKSLNSGKDREEMMKNMAKGQFTLRDLYKQFQSVSKMGPLDRV 360
Query: 350 FSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSS-NPKLMND----SRIMRI 404
M+PG L+PKG + E ++++++ +MDSM+++ELD + + ND RI RI
Sbjct: 361 MGMMPGMPEHLIPKGGDDERSKQLRKFLVIMDSMSDKELDGKIDLQKKNDPATEKRIRRI 420
Query: 405 ARGSGRQVREVMEMLEEYKRL 425
A GSG EV +L+++K++
Sbjct: 421 AAGSGCHPMEVRALLQQHKQM 441
>gi|451854034|gb|EMD67327.1| hypothetical protein COCSADRAFT_83661 [Cochliobolus sativus ND90Pr]
Length = 543
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/435 (51%), Positives = 317/435 (72%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + + EI+ AL++ADV KLV ++ +IK+ V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSPNLDEKAFDSMVKEISNALVEADVNVKLVMNLRQSIKRAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LA G NK+R+IQ+A+F+EL KM+DP F P+KGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 DFKHLAPGVNKKRLIQKAVFDELVKMVDPHAEPFKPRKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS+T++DPV +A EGVE FK
Sbjct: 121 LARWYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSHTQTDPVVVAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF+EM Q+ A PD I V+D +IGQAA QA+AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEKDLFDEMVQIQTAVTPDQTIMVLDGTIGQAAESQARAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+++TK DG A GGGA+SAVAAT +P++F+G GEHM + E F + FVS+LLGMGD
Sbjct: 241 DFGAIVITKTDGAAAGGGAISAVAATHTPIVFLGNGEHMLDLERFAPQAFVSKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++ + + +DQ+ + ++ +++G FT++ + +Q NI+KMGP+ ++ M+PG SS +
Sbjct: 301 QGLVEHVQS-LKLDQK-DTMKHITQGIFTIKDLRDQLSNIMKMGPLSKMAGMIPGLSS-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E AK+KR + + DSMT +EL+S ++ +R+ RIARGSG VREV E+L
Sbjct: 358 MGGMDDEEGGAKLKRMIYICDSMTEKELESDGKMFVDQPTRMTRIARGSGTSVREVEELL 417
Query: 420 EEYKRLAKIWSKMKG 434
+++ +A + KMKG
Sbjct: 418 TQHRMMADMAKKMKG 432
>gi|451999951|gb|EMD92413.1| hypothetical protein COCHEDRAFT_1193900 [Cochliobolus
heterostrophus C5]
Length = 540
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/435 (51%), Positives = 317/435 (72%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + + EI+ AL++ADV KLV ++ +IK+ V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSPNLDEKAFDSMVKEISNALVEADVNVKLVMNLRQSIKRAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LA G NK+R+IQ+A+F+EL KM+DP F P+KGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 DFKHLAPGVNKKRLIQKAVFDELVKMVDPHAEPFKPRKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS+T++DPV +A EGVE FK
Sbjct: 121 LARWYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSHTQTDPVVVAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF+EM Q+ A PD I V+D +IGQAA QA+AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEKDLFDEMVQIQTAVTPDQTIMVLDGTIGQAAESQARAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+++TK DG A GGGA+SAVAAT +P++F+G GEHM + E F + FVS+LLGMGD
Sbjct: 241 DFGAIVITKTDGAAAGGGAISAVAATHTPIVFLGNGEHMLDLERFAPQAFVSKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++ + + +DQ+ + ++ +++G FT++ + +Q NI+KMGP+ ++ M+PG SS +
Sbjct: 301 QGLVEHVQS-LKLDQK-DTMKHITQGIFTIKDLRDQLSNIMKMGPLSKMAGMIPGLSS-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E AK+KR + + DSMT +EL+S ++ +R+ RIARGSG VREV E+L
Sbjct: 358 MGGMDDEEGGAKLKRMIYICDSMTEKELESDGKMFVDQPTRMTRIARGSGTSVREVEELL 417
Query: 420 EEYKRLAKIWSKMKG 434
+++ +A + KMKG
Sbjct: 418 TQHRMMAGMAKKMKG 432
>gi|440794394|gb|ELR15555.1| signal peptide binding domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 496
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/500 (42%), Positives = 322/500 (64%), Gaps = 27/500 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG I +A+ ++ AT++D+ +++ L +I L+ ADVQ KLV +M+ +++ +
Sbjct: 1 MALRELGTKIKQAVDMVARATLVDQDTVDDMLKQICNGLIAADVQVKLVVQMRQRMRERI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDP----GKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ G +K++II++ + +EL ++DP P F+P +G+ +V+MFVGLQG+GKTT
Sbjct: 61 QREFAIPGSSKQKIIRRVVLDELVALVDPQPGQANPKFSPARGRTNVVMFVGLQGAGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
T K A ++++GWK A+VCADTFRAGA QL Q A ++P Y T+ DPV +A EG+
Sbjct: 121 TVAKLALQYKRRGWKVAMVCADTFRAGADHQLLQLARAIQVPAYADGTQFDPVVVAREGI 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
+ FK+E ++I+VDTSGRHKQEA LFEEM Q++ A NPD V++V+D +IGQAA+DQ AF
Sbjct: 181 DCFKREGREIILVDTSGRHKQEAQLFEEMEQLAAAVNPDTVMYVLDGTIGQAAYDQVLAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
KQ + +G++IVTK+DGHA+GGGALSAVAA P+ IGTGEH+D+ E FD + F+ ++LG
Sbjct: 241 KQRIRIGSIIVTKLDGHARGGGALSAVAAANCPITHIGTGEHVDDLESFDPRGFIQKMLG 300
Query: 297 MGDWSGFMDKIHEVVPMDQQPE-------LLQKLSEGNFTLRIMYEQFQNILKMGPIGQV 349
MG+ M+ + V D E + +L +G FTLR +YEQ ILKMGP+ +V
Sbjct: 301 MGNIPALMETMKNAVGADTSAEGKRDSALMANRLLQGGFTLRDLYEQMTTILKMGPLNKV 360
Query: 350 FSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN-----DSRIMRI 404
M+PG P E + K+K++M +MDSMT++ELD +P++ SR+ RI
Sbjct: 361 IEMIPGMDKLFQPNEEEGDPARKVKKFMIIMDSMTDDELD--DPEVWKKEKDVQSRVHRI 418
Query: 405 ARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGML 464
ARG+G V +V +L Y+ + +I + L + M+ ++P ML
Sbjct: 419 ARGAGCAVTDVNALLANYRAITRIAPPRR---------GGGLRQGQGLGPMANLIPPAML 469
Query: 465 KQIGGVGGLQNLMKQMGSTK 484
+Q+GG+ GLQN+M+ MGS +
Sbjct: 470 QQMGGLSGLQNMMRSMGSPQ 489
>gi|119498779|ref|XP_001266147.1| signal recognition particle protein SRP54 [Neosartorya fischeri
NRRL 181]
gi|119414311|gb|EAW24250.1| signal recognition particle protein SRP54 [Neosartorya fischeri
NRRL 181]
Length = 522
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/438 (49%), Positives = 302/438 (68%), Gaps = 3/438 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSSNLDEKAFDDMLKEICAALLSADVNVRLVQTLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ L NK+R+IQ+A+F+EL ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 SFSSLPPAVNKKRLIQKAVFDELVALVDPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEVIIVDTSGRHKQEEELFTEMTQIQNAVTPDQTILVLDSTIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEH+ + E F+ K FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHLMDLERFEPKAFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+G ++ + V E + ++EG +TLR E +I+KMGP+ ++ M+PG S+
Sbjct: 301 AGLVEHVQAVTKDSAAAKETYKHIAEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSN- 359
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 418
L +++ K++R + + DSMT ELDS + SR++RIA GSG VREV ++
Sbjct: 360 LTAGLDDEDGSLKLRRMVYIFDSMTAAELDSDGKIFVEQPSRMVRIACGSGTTVREVEDL 419
Query: 419 LEEYKRLAKIWSKMKGLK 436
L +++ +A + ++ G K
Sbjct: 420 LSQHRMMAGMAKRVGGQK 437
>gi|50555115|ref|XP_504966.1| YALI0F03839p [Yarrowia lipolytica]
gi|54042305|sp|Q99150.2|SRP54_YARLI RecName: Full=Signal recognition particle 54 kDa protein homolog;
Short=SRP54
gi|49650836|emb|CAG77773.1| YALI0F03839p [Yarrowia lipolytica CLIB122]
Length = 536
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/460 (49%), Positives = 312/460 (67%), Gaps = 19/460 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A +S IDE L+ L E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLEDLGKRINGAFANLSKGGDIDE-ALDAMLKEVCSALLESDVNIKLVSQLRQKVKNSV 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML--DPGKPS---FTPKKGKPSVIMFVGLQGSGKT 115
G +K+++IQ+A+F+EL ++ D S F P+KGK +V+MFVGLQGSGKT
Sbjct: 60 KA--TPNGASKKKVIQKALFDELVNLVGVDESAASAAKFKPQKGKSNVVMFVGLQGSGKT 117
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
T+CTK A Y+Q++G+K LVCADTFRAGAFDQLKQNATKAKIPF+GSYTE+DPV +A EG
Sbjct: 118 TSCTKLAVYYQRRGFKVGLVCADTFRAGAFDQLKQNATKAKIPFFGSYTETDPVAVAAEG 177
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE ++IIVDTSGRH+QE+ LF EM + A PD I V+D+SIGQAA Q++A
Sbjct: 178 VAKFKKEKFEIIIVDTSGRHRQESELFTEMVDIGAAVKPDSTIMVLDASIGQAAEPQSRA 237
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK + G++I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S+LL
Sbjct: 238 FKDASDFGSIILTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEAFSPKQFISKLL 297
Query: 296 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 355
G+GD G M+ + + +DQ+ + ++ + EG FTL + +Q N+LKMG + + M+PG
Sbjct: 298 GIGDLQGLMETMQS-LNLDQK-KTMEHIQEGIFTLADLRDQMGNMLKMGSLSSIAGMIPG 355
Query: 356 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN-DSRIMRIARGSGRQVRE 414
S + ++E +IKR + ++DSM +ELDS SRI R+ARGSG +RE
Sbjct: 356 LSG-MASSISDEEGTRRIKRMIYILDSMNQKELDSDGSIFKEVPSRITRVARGSGTSIRE 414
Query: 415 VMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQH 454
V E+L++ K +A + S+M G K G M SR NAQ+
Sbjct: 415 VEEVLQQQKMMASMASRMGG----KNGMM---SRMQNAQN 447
>gi|261202392|ref|XP_002628410.1| signal recognition particle protein SRP54 [Ajellomyces dermatitidis
SLH14081]
gi|239590507|gb|EEQ73088.1| signal recognition particle protein SRP54 [Ajellomyces dermatitidis
SLH14081]
Length = 530
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/439 (48%), Positives = 296/439 (67%), Gaps = 5/439 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DE+ + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEQAFDAMIKEICAALLSADVNVRLVQSLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 PFSSLPPAVNKKRLIQKTVFDQLVALVDPHAEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE LF EM Q+ A PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFTEMTQIQTAIKPDQTILVLDGTIGQAAESQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGSAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+ ++ + V E + +S G FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 301 ASLVEHVQAVTKDSATAKETYKHISAGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN- 359
Query: 360 LMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 417
+ G + E + K++R + + DSMT ELD ++ SRI+R+A GSG VREV +
Sbjct: 360 -ITSGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFIDQPSRIVRVACGSGTTVREVED 418
Query: 418 MLEEYKRLAKIWSKMKGLK 436
+L ++K +A + ++ G K
Sbjct: 419 LLSQHKMMAGMAKRVGGQK 437
>gi|239612234|gb|EEQ89221.1| signal recognition particle protein SRP54 [Ajellomyces dermatitidis
ER-3]
gi|327353181|gb|EGE82038.1| signal recognition particle protein [Ajellomyces dermatitidis ATCC
18188]
Length = 533
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/439 (48%), Positives = 296/439 (67%), Gaps = 5/439 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DE+ + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEQAFDAMIKEICAALLSADVNVRLVQSLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 PFSSLPPAVNKKRLIQKTVFDQLVALVDPHAEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE LF EM Q+ A PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFTEMTQIQTAIKPDQTILVLDGTIGQAAESQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGSAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+ ++ + V E + +S G FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 301 ASLVEHVQAVTKDSATAKETYKHISAGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN- 359
Query: 360 LMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 417
+ G + E + K++R + + DSMT ELD ++ SRI+R+A GSG VREV +
Sbjct: 360 -ITSGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFIDQPSRIVRVACGSGTTVREVED 418
Query: 418 MLEEYKRLAKIWSKMKGLK 436
+L ++K +A + ++ G K
Sbjct: 419 LLSQHKMMAGMAKRVGGQK 437
>gi|363751038|ref|XP_003645736.1| hypothetical protein Ecym_3433 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889370|gb|AET38919.1| Hypothetical protein Ecym_3433 [Eremothecium cymbalariae
DBVPG#7215]
Length = 536
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/434 (49%), Positives = 301/434 (69%), Gaps = 7/434 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNEC-LNEITRALLQADVQFKLVREMQTNIK-- 57
MVLA LG I+ A+ Q N + V E L I ALL+ DV KLV ++ N+K
Sbjct: 1 MVLADLGKRINAAVTQALNNDKDEYAVTVELMLKSIATALLENDVNIKLVSNLRNNLKVK 60
Query: 58 --KIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
+ N + + +++IQ+ +F ELC ++D ++ PKK K +VIMFVGLQGSGKT
Sbjct: 61 LLGVKNSNKDTSQAQTKKLIQKTVFEELCSLVDCETAAYQPKKKKSNVIMFVGLQGSGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
T+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KAKIPFYGSYTE++PV++A +G
Sbjct: 121 TSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIKAKIPFYGSYTETNPVKVAADG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
VE FKKE ++IIVDTSGRH QE ALF+EM ++SE P+ I V+D+SIGQAA Q++A
Sbjct: 181 VEKFKKEKFEIIIVDTSGRHHQEDALFQEMVEISEVVKPNSTIMVLDASIGQAAEQQSRA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S GA+++TKMDGHAKGGGA+SAVAATK+P+IFIGTGEH+ +FE F K F+S+LL
Sbjct: 241 FKESSDFGAIVLTKMDGHAKGGGAISAVAATKTPIIFIGTGEHIHDFEKFSPKSFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 355
G+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ + SM+PG
Sbjct: 301 GIGDIESLLEQFKTVSNKEDTKATMENIQQGKFTLLDFQKQMQTIMKMGPLSNIASMIPG 360
Query: 356 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVRE 414
+ +M E+E+ K+K+ + ++DSMT EEL+S L++ SR++R+ARGSG V E
Sbjct: 361 LGN-MMNSVTEEETSKKMKKMVYVLDSMTKEELESDGRILIDQPSRLIRVARGSGTSVFE 419
Query: 415 VMEMLEEYKRLAKI 428
V +L + + +A++
Sbjct: 420 VEMILMQQQMMARM 433
>gi|302408571|ref|XP_003002120.1| signal recognition particle 54 kDa protein [Verticillium albo-atrum
VaMs.102]
gi|261359041|gb|EEY21469.1| signal recognition particle 54 kDa protein [Verticillium albo-atrum
VaMs.102]
Length = 518
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/435 (49%), Positives = 301/435 (69%), Gaps = 12/435 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + ++DV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINTAVSDLTRAPNLDEKR--------SAPPPRSDVNVRLVGQLRKSIKSTV 52
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+ +F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 53 NFKDLPPAVNKKRLIQKTVFDELVKLVDPHAEPFKPKKGKANVIMFVGLQGAGKTTTCTK 112
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGV+ FK
Sbjct: 113 LARHYQARGLKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAREGVDKFK 172
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 173 KERFEVIIVDTSGRHRQEENLFQEMVDIQAAIKPDETIMVLDASIGQQAESQAKAFKEAA 232
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FV +LLGMGD
Sbjct: 233 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDFERFAPQQFVQKLLGMGDM 292
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+ ++ + + +DQ+ + ++ ++EG FT+R + +Q NI+KMGP+ ++ M+PG S +
Sbjct: 293 ASLVEHVQS-LKLDQK-DTMKHITEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG-M 349
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E K+KR + + DSMT++ELDS +R+ R+ARGSG VREV ++L
Sbjct: 350 MQGMDDEEGSLKLKRMIYICDSMTDKELDSDGKMFTEQPTRMTRVARGSGTSVREVEDLL 409
Query: 420 EEYKRLAKIWSKMKG 434
+ + +A + KM G
Sbjct: 410 TQQRMMAGMAKKMGG 424
>gi|169624365|ref|XP_001805588.1| hypothetical protein SNOG_15441 [Phaeosphaeria nodorum SN15]
gi|160705155|gb|EAT77106.2| hypothetical protein SNOG_15441 [Phaeosphaeria nodorum SN15]
Length = 533
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/435 (51%), Positives = 315/435 (72%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + EI+ AL++ADV KLV ++ +IK+ V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSPNLDEKAFEAMVKEISNALVEADVNVKLVMNLRQSIKRSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LA NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFKHLAPNVNKKRVIQKAVFDELVKLVDPHAEPFKPKKGKSNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP++GS+T++DPV +A EGVE FK
Sbjct: 121 LARWYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYFGSHTQTDPVIVAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF+EM Q+ A PD I V+D++IGQAA QA+AFK +
Sbjct: 181 KERFEIIIVDTSGRHRQEKDLFDEMVQIQNAVQPDQTIMVLDATIGQAAEGQARAFKDAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+++TK DG A GGGA+SAVAAT +P++FIG GEHM + E F +PFVS+LLGMGD
Sbjct: 241 DFGAIVITKTDGAAAGGGAISAVAATHTPIVFIGNGEHMLDLERFSPEPFVSKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++ + + +DQ+ + ++ +++G FT++ + +Q NI+KMGP+ ++ M+PG + +
Sbjct: 301 QGLVEHVQS-LKLDQK-DTMKHITQGIFTIKDLRDQLSNIMKMGPLSKMAGMIPGLGN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E AK+KR + + DSMT +EL+S ++ +R+ RIARGSG VREV E+L
Sbjct: 358 MGGMDDEEGGAKLKRMIYICDSMTEKELESDGKMFVDQPTRMTRIARGSGTSVREVEELL 417
Query: 420 EEYKRLAKIWSKMKG 434
+++ +A + KMKG
Sbjct: 418 TQHRMMAGMAKKMKG 432
>gi|240277685|gb|EER41193.1| signal recognition particle protein [Ajellomyces capsulatus H143]
gi|325093770|gb|EGC47080.1| signal recognition particle protein SRP54 [Ajellomyces capsulatus
H88]
Length = 527
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/439 (48%), Positives = 296/439 (67%), Gaps = 5/439 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +D + + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNVDAQAFDAMIKEICAALLSADVNVRLVQSLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 PFSSLPPAVNKKRLIQKTVFDQLVALVDPHAEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE LF EM Q+ A PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFVEMTQIQTAIKPDQTILVLDGTIGQAAESQSAAFKAAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG+A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGNAAGGGAISAVAATHTPIIFLGTGEHMLDLERFSPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+ ++ + V E + +S G FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 301 ASLVEHVQAVTKDSATAKETYKHISAGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN- 359
Query: 360 LMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 417
+ G + E + K++R + + DSMT ELD ++ SRI+R+A GSG VREV +
Sbjct: 360 -ITSGLDDEDGSLKLRRMIYIFDSMTATELDGDGKVFVDQPSRIVRVACGSGTTVREVED 418
Query: 418 MLEEYKRLAKIWSKMKGLK 436
+L ++K +A + ++ G K
Sbjct: 419 LLSQHKMMAGMAKRVGGQK 437
>gi|225557139|gb|EEH05426.1| signal recognition particle protein SRP54 [Ajellomyces capsulatus
G186AR]
Length = 527
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/439 (48%), Positives = 296/439 (67%), Gaps = 5/439 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +D + + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNVDAQAFDAMIKEICAALLSADVNVRLVQSLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 PFSSLPPAVNKKRLIQKTVFDQLVALVDPHAEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE LF EM Q+ A PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFVEMTQIQTAIKPDQTILVLDGTIGQAAESQSAAFKAAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG+A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGNAAGGGAISAVAATHTPIIFLGTGEHMLDLERFSPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+ ++ + V E + +S G FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 301 ASLVEHVQAVTKDSATAKETYKHISAGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN- 359
Query: 360 LMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 417
+ G + E + K++R + + DSMT ELD ++ SRI+R+A GSG VREV +
Sbjct: 360 -ITSGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFVDQPSRIVRVACGSGTTVREVED 418
Query: 418 MLEEYKRLAKIWSKMKGLK 436
+L ++K +A + ++ G K
Sbjct: 419 LLSQHKMMAGMAKRVGGQK 437
>gi|384498168|gb|EIE88659.1| signal recognition particle 54 kDa subunit [Rhizopus delemar RA
99-880]
Length = 745
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/450 (46%), Positives = 301/450 (66%), Gaps = 43/450 (9%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ ++ A +IDEKVL+ + +I ALL +DV LV++++TNIKK V
Sbjct: 253 MVLADLGRKINSALSDLTKAPVIDEKVLDSLVKQICAALLASDVNVMLVQKLRTNIKKSV 312
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL++LA NK+R+I++A+ +EL +++DP + P K + ++ M VGLQG+GKTTTCTK
Sbjct: 313 NLEELANSANKKRLIEKAVMDELSRLVDPEVEPYKPVKRRTNIFMMVGLQGAGKTTTCTK 372
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q+KGWK ALVCADTFRAGAFDQLKQNATKAKIP+YGSYTE+DPV IAVEGVE F+
Sbjct: 373 IASFYQRKGWKVALVCADTFRAGAFDQLKQNATKAKIPYYGSYTETDPVTIAVEGVEKFR 432
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E ++IIVDTSGRHKQE LFEEM+Q+S + PD IFVMD +IGQAA QA+AFK++
Sbjct: 433 AEKFEIIIVDTSGRHKQETELFEEMKQISSSVKPDTTIFVMDGTIGQAAESQAKAFKEAA 492
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
G++I+TKMDGHAKGGGA+SAVAAT SP+IF+G GEH+ + + F+ K F+ ++LG+ D
Sbjct: 493 GFGSIIITKMDGHAKGGGAISAVAATHSPIIFLGVGEHLQDMDRFEPKSFIRKVLGVQDM 552
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
++ + + + ++ +L++ + + +PG +E+
Sbjct: 553 RDVIEHVQDSINLNDNKKLIKNIEKA--------------------------IPGMPAEM 586
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNE----------------ELDSSNPKLMNDSRIMRI 404
+ G E+E ++KR M +MDSMT+E ELD + R++R+
Sbjct: 587 L-AGAEQEGGKRMKRMMCIMDSMTDEGNKDVDNPLKLNPLTIELDGDDKPFKEMKRVIRV 645
Query: 405 ARGSGRQVREVMEMLEEYKRLAKIWSKMKG 434
ARGSG V EV E++ +Y + A++ + G
Sbjct: 646 ARGSGTTVCEVQEIIFQYTKFAEMVKSIGG 675
>gi|1147795|gb|AAC49735.1| Srp54p [Yarrowia lipolytica]
Length = 536
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/460 (49%), Positives = 311/460 (67%), Gaps = 19/460 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A +S IDE L+ L E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLEDLGKRINGAFANLSKGGDIDE-ALDAMLKEVCSALLESDVNIKLVSQLRQKVKNSV 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML--DPGKPS---FTPKKGKPSVIMFVGLQGSGKT 115
G +K+++IQ+A+F+EL ++ D S F P+KGK +V+MFVGLQGSGKT
Sbjct: 60 KA--TPNGASKKKVIQKALFDELVNLVGVDESAASAAKFKPQKGKSNVVMFVGLQGSGKT 117
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
T+CTK A Y+Q++G+K LVCADTFRAGAFDQLKQNATKAKIPF+GSYTE+DPV +A EG
Sbjct: 118 TSCTKLAVYYQRRGFKVGLVCADTFRAGAFDQLKQNATKAKIPFFGSYTETDPVAVAAEG 177
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE ++IIVDTSGRH+QE+ LF EM + A PD I V+D+SIGQAA Q++A
Sbjct: 178 VAKFKKEKFEIIIVDTSGRHRQESELFTEMVDIGAAVKPDSTIMVLDASIGQAAEPQSRA 237
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK + G++I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S+LL
Sbjct: 238 FKDASDFGSIILTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEAFSPKQFISKLL 297
Query: 296 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 355
G+GD G M+ + + +DQ+ + ++ + EG FTL + +Q N+LKMG + + M+PG
Sbjct: 298 GIGDLQGLMETMQS-LNLDQK-KTMEHIQEGIFTLADLRDQMGNMLKMGSLSSIAGMIPG 355
Query: 356 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN-DSRIMRIARGSGRQVRE 414
S + ++E +IKR + ++DSM +ELDS SRI R+ARGS +RE
Sbjct: 356 LSG-MASSISDEEGTRRIKRMIYILDSMNQKELDSDGSIFKEVPSRITRVARGSETSIRE 414
Query: 415 VMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQH 454
V E+L++ K +A + S+M G K G M SR NAQ+
Sbjct: 415 VEEVLQQQKMMASMASRMGG----KNGMM---SRMQNAQN 447
>gi|407926155|gb|EKG19125.1| Signal recognition particle SRP54 subunit GTPase [Macrophomina
phaseolina MS6]
Length = 525
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/438 (52%), Positives = 311/438 (71%), Gaps = 5/438 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + + EI AL++ADV KLV ++ +I+K V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKDFDRMVKEICNALVEADVNIKLVAGLRASIRKAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N D+A G NK+R+IQ+A+F+EL K++DP F P+KGK +VIMFVGLQGSGKTT+CTK
Sbjct: 61 NFKDIAPGVNKKRLIQKAVFDELVKLVDPHSEPFKPRKGKSNVIMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++ +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A EGVE FK
Sbjct: 121 LARWYSARGFKSCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVAVAKEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF+EM Q+ +A P I V+DSSIGQAA QA+AFK+S
Sbjct: 181 KERFEIIIVDTSGRHRQEQDLFDEMIQIQQAVEPHQTIMVLDSSIGQAAESQARAFKESA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
G++I+TK DG A GGGA+SA AAT P+ F+GTGEHM +FE FD + FV +LLGMGD
Sbjct: 241 DFGSIILTKTDGAAAGGGAISATAATHCPIAFLGTGEHMLDFEKFDPQRFVGKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++ + + +DQ+ E ++ + EG FT+R + +Q QNI+KMGP+ ++ M+PG S +
Sbjct: 301 QGLVEHVQS-LKLDQK-ETMKHIQEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGLSG-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E K+KR + + DSMT +ELDS ++ SR+ R+A GSG VREV E+L
Sbjct: 358 MGGMDDEEGSLKLKRMIYICDSMTTKELDSDGKCFTDEPSRMTRVAMGSGTSVREVEELL 417
Query: 420 EEYKRLAKIWSKM-KGLK 436
+ + + KM KG+K
Sbjct: 418 SQRMLMGGMAKKMGKGMK 435
>gi|443894400|dbj|GAC71748.1| signal recognition particle, subunit Srp54 [Pseudozyma antarctica
T-34]
Length = 645
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/570 (42%), Positives = 337/570 (59%), Gaps = 88/570 (15%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+ LG I+ A Q +S +D +++ L + AL++ADV KLV +++ +K V
Sbjct: 1 MVLSDLGRRINSAFQDLSKVPTVDAASIDQLLKSVCNALIEADVNVKLVANLRSQVKSQV 60
Query: 61 N--LDDLAAGH----NKRRIIQQAIFNELCKMLDP--GK-----------PS-------- 93
L+D A + +R+ +Q+A+F+ L ++DP G+ PS
Sbjct: 61 TALLNDKANANWSDAQRRQRVQKAVFDHLVALVDPLHGQSTTDDESGAVVPSANAGPGDI 120
Query: 94 FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNAT 153
F PKKGKP+VIMFVGLQGSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA+
Sbjct: 121 FKPKKGKPNVIMFVGLQGSGKTTSCTKLALYYQKRGFKTGLVCADTFRAGAFDQLKQNAS 180
Query: 154 KAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATN 213
K +PFYGSYTE+DPV I+ GV +FK+ ++IIVDTSGRHKQE LF+EMR++ A
Sbjct: 181 KINVPFYGSYTETDPVAISAAGVASFKQNRFEVIIVDTSGRHKQEQELFDEMREIDAAVT 240
Query: 214 PDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFI 273
PDL I V+D++IGQAA Q++AFK + GA+IVTK+DGHAKGGGA+SAVAATK+P++FI
Sbjct: 241 PDLTIMVLDANIGQAAEAQSRAFKDAAGYGAIIVTKLDGHAKGGGAISAVAATKTPIMFI 300
Query: 274 GTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV---PMDQQPELLQKLSEGN-FT 329
GTGEH + E F +PF+S+LLGMGD +G MDK+ E+ ++Q E+L+K+ EG F+
Sbjct: 301 GTGEHAADLEPFRAQPFISKLLGMGDITGLMDKMEEMQMNGGQERQREMLKKIEEGGIFS 360
Query: 330 LRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQ-AKIKRYMTMMDSMTNEEL 388
+R EQ NI+ MGP+ ++ M+PG L G + E+ K+KR M + D+MT EEL
Sbjct: 361 IRDWREQLSNIMGMGPLSKIAGMIPGMGQMLSGAGGDDEAAGGKMKRMMFITDAMTAEEL 420
Query: 389 DSSN-----------PKLMNDS-----------------------------RIMRIARGS 408
DS P + D+ R R+ARGS
Sbjct: 421 DSDGRLFYAPIRSKKPPVSADTKEVAIAESSTAAAKSKKKKKPQQKVRMTARARRVARGS 480
Query: 409 GRQVREVMEMLEEYKRLAKIWSKMKGLK----------------IPKKGEMSALSRNMNA 452
G V+EV E L +Y+ ++ + KM G + +P G++
Sbjct: 481 GTSVKEVEEFLMQYRLVSSMVKKMGGKQGWLKQMQGLGGGGKGKMPAPGQLPPGMSREQV 540
Query: 453 QHMSKVLPQGMLKQIGGVGGLQNLMKQMGS 482
M LP + Q+ GG + L++Q+ S
Sbjct: 541 MQMQNALPPEIKAQLRQPGGREKLLQQIQS 570
>gi|71015804|ref|XP_758844.1| hypothetical protein UM02697.1 [Ustilago maydis 521]
gi|46098350|gb|EAK83583.1| hypothetical protein UM02697.1 [Ustilago maydis 521]
Length = 638
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/566 (42%), Positives = 335/566 (59%), Gaps = 84/566 (14%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+ LG I+ A Q +S +D +++ L + AL++ADV KLV +++ +K V
Sbjct: 1 MVLSDLGRRINSAFQDLSKVPTVDAASIDQLLKSVCNALIEADVNVKLVANLRSQVKSQV 60
Query: 61 N--LDDLAAGH----NKRRIIQQAIFNELCKMLDP-------------------GKPS-- 93
L+D + +R+ +Q+A+F+ L ++DP P
Sbjct: 61 TALLNDKTNANWSDAQRRQRVQKAVFDHLVALVDPLHGQTKTDDDSGAVVASANAGPGDI 120
Query: 94 FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNAT 153
F PKKGKP+VIMFVGLQGSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA+
Sbjct: 121 FKPKKGKPNVIMFVGLQGSGKTTSCTKLALYYQKRGFKTGLVCADTFRAGAFDQLKQNAS 180
Query: 154 KAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATN 213
K +PFYGSYTE+DPV I+ GV +FK+ ++IIVDTSGRHKQE LF+EMR++ A
Sbjct: 181 KINVPFYGSYTETDPVAISAAGVASFKQNRFEVIIVDTSGRHKQEQELFDEMREIDTAVT 240
Query: 214 PDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFI 273
PDL I V+D++IGQAA Q++AFKQ+ GA+IVTK+DGHAKGGGA+SAVAATK+P++FI
Sbjct: 241 PDLTIMVLDANIGQAAEAQSRAFKQAAGYGAIIVTKLDGHAKGGGAISAVAATKTPIMFI 300
Query: 274 GTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV---PMDQQPELLQKLSEGN-FT 329
GTGEH + E F +PF+S+LLGMGD SG MDK+ E+ ++Q E+L+K+ +G F+
Sbjct: 301 GTGEHAADLEPFRAQPFISKLLGMGDISGLMDKMEEMQMNGGQERQQEMLKKIGQGGIFS 360
Query: 330 LRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQ-AKIKRYMTMMDSMTNEEL 388
+R EQ NI+ MGP+ ++ M+PG L G + E+ +K+KR M + D+MT EEL
Sbjct: 361 IRDWREQLSNIMGMGPLSKIAGMIPGMGQMLSGAGGDDEAAGSKMKRMMFITDAMTAEEL 420
Query: 389 DSS--------------------------------------NPKLMNDSRIMRIARGSGR 410
DS K+ +R R+ARGSG
Sbjct: 421 DSDGRMFYAPIRSKKPPADTKQVAVAESSTAAAKSKKKKKPQSKVRMTARARRVARGSGT 480
Query: 411 QVREVMEMLEEYKRLAK---------IWSKMKG-----LKIPKKGEMSALSRNMNAQHMS 456
V+EV E L +Y+ +A ++ +M+G K+P G + M
Sbjct: 481 SVKEVEEFLMQYRMVANMCKRVGKAGLFKQMQGGAGGKGKMPTPGMLPPGMSREQVMQMQ 540
Query: 457 KVLPQGMLKQIGGVGGLQNLMKQMGS 482
LP + Q+ GG + L++Q+ S
Sbjct: 541 NALPPEIKAQLRQPGGREKLLQQIQS 566
>gi|378727694|gb|EHY54153.1| signal recognition particle protein [Exophiala dermatitidis
NIH/UT8656]
Length = 526
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/461 (50%), Positives = 316/461 (68%), Gaps = 6/461 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+ LG I+ A+ ++ +DEK + + EI ALL ADV +LV+ ++ +I+ V
Sbjct: 1 MVLSDLGRRINAAVSNLNREPNLDEKAFDAMIKEICSALLAADVNVRLVKNLRKSIQSTV 60
Query: 61 NLDDL---AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTT 117
N DL + ++K+R+IQQA+F+ L +++DP + PKKGK +VIMFVGLQG+GKTTT
Sbjct: 61 NFKDLPPQTSSNSKKRLIQQAVFDHLVQLVDPHAEPYKPKKGKSNVIMFVGLQGAGKTTT 120
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTK A Y+ ++G+K LVCADTFRAGA+DQLKQNATKAKIP+YGS T++DP +A EGV
Sbjct: 121 CTKLARYYAQRGFKACLVCADTFRAGAYDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVA 180
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
FKKE ++IIVDTSGRHKQEA LFEEM QV +A PD I V+D +IGQAA Q+ AFK
Sbjct: 181 RFKKEKFEIIIVDTSGRHKQEADLFEEMIQVQKAIKPDQTIMVLDGTIGQAAEAQSSAFK 240
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
++ GA+I+TK DG A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+S+LLG
Sbjct: 241 EAADFGAIIITKTDGGAAGGGAISAVAATHTPIIFLGTGEHMMDLERFAPKPFISKLLGY 300
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQK-LSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
GD SG +++I + + QK L+EG FTLR M EQ NI+KMGP+ +V M+PG
Sbjct: 301 GDMSGLIEQIQSITRESAGMKETQKHLAEGIFTLRDMKEQITNIMKMGPLSRVAGMIPGL 360
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREV 415
S +M +++ K+KR + + DSMT +ELDS L++ SR++RIA GSG VR+V
Sbjct: 361 GS-MMQGMSDEDGTEKLKRMIYIYDSMTAKELDSDGKILISQPSRMVRIACGSGTSVRDV 419
Query: 416 MEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMS 456
E+L ++K +A + M K + S + AQ M+
Sbjct: 420 EELLTQHKVMASLAKNMGAQKKNMQRAQSMMQGGNKAQQMA 460
>gi|330933421|ref|XP_003304165.1| hypothetical protein PTT_16633 [Pyrenophora teres f. teres 0-1]
gi|311319393|gb|EFQ87728.1| hypothetical protein PTT_16633 [Pyrenophora teres f. teres 0-1]
Length = 541
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/435 (50%), Positives = 314/435 (72%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + + EI+ AL++ADV KLV ++ +IK+ V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSPNLDEKAFDAMVKEISNALVEADVNVKLVMNLRQSIKRTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LA G NK+R+IQ+A+F+EL KM+DP F P+KGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 DFKHLAPGVNKKRLIQKAVFDELVKMVDPHAEPFKPRKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS+T++DPV +A EGVE FK
Sbjct: 121 LARWYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSHTQTDPVVVAGEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF+EM Q+ PD I V+D +IGQAA QA+AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEKDLFDEMVQIQNVVTPDQTIMVLDGTIGQAAESQARAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P++F+G GEHM + E F + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGAAAGGGAISAVAATHTPIVFLGNGEHMLDLERFAPQAFVSKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++ + + +DQ+ + ++ +++G FT++ + +Q NI+KMGP+ ++ M+PG + +
Sbjct: 301 QGLVEHVQS-LKLDQK-DTMKHITQGIFTIKDLRDQLSNIMKMGPLSKMAGMIPGLGN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E K+KR + + DSMT +EL+S ++ +R+ RIARGSG VREV E+L
Sbjct: 358 MGGMDDEEGGMKLKRMIYICDSMTEKELESDGKMFVDQPTRMTRIARGSGTSVREVEELL 417
Query: 420 EEYKRLAKIWSKMKG 434
+++ +A + KMKG
Sbjct: 418 TQHRMMAGMAKKMKG 432
>gi|396497422|ref|XP_003844973.1| similar to signal recognition particle 54 kda protein
[Leptosphaeria maculans JN3]
gi|312221554|emb|CBY01494.1| similar to signal recognition particle 54 kda protein
[Leptosphaeria maculans JN3]
Length = 533
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/435 (50%), Positives = 316/435 (72%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + + EI+ AL++ADV KLV ++ +IK+ V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSPNLDEKAFDAMVKEISNALVEADVNVKLVMNLRQSIKRTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LA G NK+R+IQ+A+++EL K++DP F P+KGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 DFKHLAPGVNKKRLIQKAVYDELVKLVDPHAEPFKPRKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS+T++DPV +A EGVE FK
Sbjct: 121 LARWYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSHTQTDPVVVAGEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF+EM Q+ A PD I V+D +IGQAA QA+AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEKDLFDEMVQIQNAVQPDQTIMVLDGTIGQAAESQARAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+++TK DG A GGGA+SAVAAT +P++FIG GEH+ + E F + FVS+LLGMGD
Sbjct: 241 DFGAIVITKTDGAAAGGGAISAVAATHTPIVFIGNGEHLLDLERFAPQAFVSKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++ + + +DQ+ + ++ +++G FT++ + +Q NI+KMGP+ ++ M+PG S+ +
Sbjct: 301 QGLVEHVQS-LKLDQK-DTMKHITQGIFTIKDLRDQLSNIMKMGPLSKMAGMIPGLSN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E K+KR + + DSMT +EL+S ++ +R+ R+ARGSG VREV E+L
Sbjct: 358 MGGMDDEEGGLKLKRMIYICDSMTEKELESDGKMFVDQPTRMTRVARGSGTSVREVEELL 417
Query: 420 EEYKRLAKIWSKMKG 434
+++ +A + KMKG
Sbjct: 418 TQHRMMAGMAKKMKG 432
>gi|302506196|ref|XP_003015055.1| hypothetical protein ARB_06815 [Arthroderma benhamiae CBS 112371]
gi|291178626|gb|EFE34415.1| hypothetical protein ARB_06815 [Arthroderma benhamiae CBS 112371]
Length = 504
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/443 (48%), Positives = 299/443 (67%), Gaps = 7/443 (1%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
+ EI ALL ADV +LV++++ +IK V L + NK+R+IQ+A+F++L ++DP
Sbjct: 2 IKEICAALLSADVNVRLVQQLRKSIKAAVQLPSIPPAVNKKRLIQKAVFDQLVALVDPHA 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F PKKGK +VIM VGLQG+GKTTTCTK A ++Q KG+K ALVCADTFRAGAFDQLKQN
Sbjct: 62 EPFKPKKGKSNVIMMVGLQGAGKTTTCTKLARHYQTKGFKAALVCADTFRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS T++DPV ++ EGV FKKE D+IIVDTSGRH+QE LF EM Q+ A
Sbjct: 122 ATKAKIPYYGSLTQTDPVVVSSEGVAKFKKERFDIIIVDTSGRHRQEEDLFAEMTQIQSA 181
Query: 212 TNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVI 271
PD I V+DS+IGQAA Q+ AFK + GA+I+TK DGHA GGGA+SAVAAT++P+I
Sbjct: 182 IKPDQTIMVLDSTIGQAAETQSAAFKSAADFGAIIITKTDGHAAGGGAISAVAATRTPII 241
Query: 272 FIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTL 330
F+GTGEHM + E F +PFV +LLGMGD + ++ + V E + +SEG FTL
Sbjct: 242 FLGTGEHMLDLERFAPRPFVQKLLGMGDMASLVEHVQAVTKDSAGAKETYKHISEGIFTL 301
Query: 331 RIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA-KIKRYMTMMDSMTNEELD 389
R E +I+KMGP+ ++ SM+PG S+ + G + E + K++R + + DSMT ELD
Sbjct: 302 RDFRENITSIMKMGPLSKISSMIPGLSN--ITSGLDDEDGSLKLRRMIYIFDSMTASELD 359
Query: 390 SSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSR 448
++ +R++R+A GSG VREV ++L ++K +A + K+ G K + + L
Sbjct: 360 GDGKVFVDQPTRVVRLACGSGTTVREVEDLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKG 419
Query: 449 NMNAQHMSKVLPQGMLKQIGGVG 471
Q M+ + Q + +GG G
Sbjct: 420 GNKEQQMAAM--QKRMAAMGGAG 440
>gi|388853536|emb|CCF52935.1| probable SRP54-signal recognition particle subunit [Ustilago
hordei]
Length = 646
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 241/570 (42%), Positives = 334/570 (58%), Gaps = 88/570 (15%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+ LG I+ A Q +S +D +++ L + AL++ADV KLV +++ +K V
Sbjct: 1 MVLSDLGRRINSAFQDLSKVPTVDAASIDQLLKSVCNALIEADVNVKLVANLRSRVKAQV 60
Query: 61 N--LDDLAAGH----NKRRIIQQAIFNELCKMLDP--GK-----------PS-------- 93
L+D A + +R+ +Q+A+F+ L ++DP G+ PS
Sbjct: 61 TALLNDKANANWTDTQRRQRVQKAVFDHLVALVDPFHGQTKTDDESGAVVPSSNAGPGDI 120
Query: 94 FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNAT 153
F PKKGKP+VIMFVGLQGSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA+
Sbjct: 121 FKPKKGKPNVIMFVGLQGSGKTTSCTKLALYYQKRGFKTGLVCADTFRAGAFDQLKQNAS 180
Query: 154 KAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATN 213
K +PFYGSYTE+DPV I+ GV +FK+ ++IIVDTSGRHKQE LF+EMR++ A
Sbjct: 181 KINVPFYGSYTETDPVAISAAGVASFKQNRFEVIIVDTSGRHKQEQELFDEMREIDVAVT 240
Query: 214 PDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFI 273
PDL I V+D++IGQAA Q++AFK++ GA+IVTK+DGHAKGGGA+SAVAAT +P++FI
Sbjct: 241 PDLTIMVLDANIGQAAEAQSRAFKEAAGYGAIIVTKLDGHAKGGGAISAVAATSTPIMFI 300
Query: 274 GTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV---PMDQQPELLQKLSEGN-FT 329
GTGEH + E F +PF+S+LLGMGD SG MDK+ E+ ++Q E+L+K+ EG F+
Sbjct: 301 GTGEHAADLEPFRAQPFISKLLGMGDISGLMDKMEEMQMNGGQERQQEMLKKIGEGGVFS 360
Query: 330 LRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQ-AKIKRYMTMMDSMTNEEL 388
+R EQ NI+ MGP+ ++ M+PG L G + E+ K+KR M + D+MT EEL
Sbjct: 361 IRDWREQLSNIMGMGPLSKIAGMIPGMGQMLSGAGGDDEAAGGKMKRMMFITDAMTAEEL 420
Query: 389 DSSN----------------------------------------PKLMNDSRIMRIARGS 408
DS K+ +R R+ARGS
Sbjct: 421 DSDGRLFYAPIRSKKPPAPVESKQVAIAESSTAAGRAKKKKKPLQKVRMTARARRVARGS 480
Query: 409 GRQVREVMEMLEEYKRLAKIWSKMKG----------------LKIPKKGEMSALSRNMNA 452
G V+EV E L +Y+ + + KM G K+P G +
Sbjct: 481 GTSVKEVEEFLMQYRMVGSMVKKMGGKDGFLRQMGMGGAGGKGKMPAPGMLPPGMSREQV 540
Query: 453 QHMSKVLPQGMLKQIGGVGGLQNLMKQMGS 482
M LP + Q+ GG + L++Q+ S
Sbjct: 541 MQMQNALPPDIKAQLRQPGGREKLLQQIQS 570
>gi|452981868|gb|EME81627.1| hypothetical protein MYCFIDRAFT_71818 [Pseudocercospora fijiensis
CIRAD86]
Length = 521
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/435 (50%), Positives = 311/435 (71%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + + EI+ AL++ADV LV+ ++ IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRAQTLDEKAFDGMIKEISNALVEADVNVGLVKNLRQTIKGTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+DL NK+RIIQ+A+F+ L +++P + + PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 KFNDLPPHANKKRIIQKAVFDALVDIVNPHQNPYQPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A +GVE FK
Sbjct: 121 LARWYQARGFKTCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH QEAALF EM+ + A +P I V+D+SIGQAA Q++ FK +
Sbjct: 181 KEKFEIIIVDTSGRHHQEAALFAEMKDIQHAVSPHQTIMVLDASIGQAAESQSREFKDAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P++FIGTGEH+ + E F+ + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGAAAGGGAISAVAATHTPIVFIGTGEHLLDLEKFNPQSFVSKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++ + + +DQ+ E ++ ++EG F++R + +Q QNI+KMGP+ ++ M+PG S+ +
Sbjct: 301 QGLVEHVQS-LKLDQK-ETMKNITEGKFSVRDLRDQLQNIMKMGPLSKMAGMIPGLSN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M + ++E K+KR + + DSMT +ELDS + +RI R+ARGSG VREV E+L
Sbjct: 358 MGQMDDEEGGMKLKRMIYICDSMTAKELDSDGKMFVEQPTRITRVARGSGTSVREVEELL 417
Query: 420 EEYKRLAKIWSKMKG 434
+ + +A + KMKG
Sbjct: 418 TQQRMMAGMAKKMKG 432
>gi|343429513|emb|CBQ73086.1| probable SRP54-signal recognition particle subunit [Sporisorium
reilianum SRZ2]
Length = 637
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/503 (44%), Positives = 312/503 (62%), Gaps = 71/503 (14%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+ L I+ A Q +S +D +++ L + AL++ADV KLV +++ +K V
Sbjct: 1 MVLSDLSRRINSAFQDLSKVPTVDAASIDQLLKSVCNALIEADVNVKLVANLRSQVKSQV 60
Query: 61 N--LDDLAAGH----NKRRIIQQAIFNELCKMLDP-------------------GKPS-- 93
L+D A + +R+ +Q+A+F+ L ++DP P
Sbjct: 61 TALLNDKANANWSDAQRRQRVQKAVFDHLVALVDPLHGQTKTDAESGAVVAAGNAGPGDI 120
Query: 94 FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNAT 153
F PKKGKP+VIMFVGLQGSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA+
Sbjct: 121 FKPKKGKPNVIMFVGLQGSGKTTSCTKLALYYQKRGFKTGLVCADTFRAGAFDQLKQNAS 180
Query: 154 KAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATN 213
K +PFYGSYTE+DPV I+ GV +FK+ ++IIVDTSGRHKQE LF+EMR++ A
Sbjct: 181 KVNVPFYGSYTETDPVAISAAGVASFKQNRFEVIIVDTSGRHKQEQELFDEMREIDAAVT 240
Query: 214 PDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFI 273
PDL I V+D++IGQAA Q++AFK + GA+IVTK+DGHAKGGGA+SAVAAT +P++FI
Sbjct: 241 PDLTIMVLDANIGQAAEAQSRAFKDAAGYGAIIVTKLDGHAKGGGAISAVAATSTPIMFI 300
Query: 274 GTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV---PMDQQPELLQKLSE-GNFT 329
GTGEH + E F +PF+S+LLGMGD SG MDK+ E+ ++Q E+L+K+ E G+F+
Sbjct: 301 GTGEHAADLEPFRAQPFISKLLGMGDMSGLMDKMEEMQMNGGQERQREMLKKIEEGGHFS 360
Query: 330 LRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA-KIKRYMTMMDSMTNEEL 388
+R EQ NI+ MGP+ ++ M+PG L G + E+ K+KR M + D+MT EEL
Sbjct: 361 IRDWREQLSNIMGMGPLSKIAGMIPGMGQMLSGAGGDDEAAGNKMKRMMFITDAMTAEEL 420
Query: 389 DSS---------------------------------------NPKLMNDSRIMRIARGSG 409
DS PK+ ++R R+ARGSG
Sbjct: 421 DSDGRIFTTPVRSKKPPAADTKELAVAESSTAAAKSKKKKKPQPKVRMNARARRVARGSG 480
Query: 410 RQVREVMEMLEEYKRLAKIWSKM 432
V+EV E L +Y+ + + ++M
Sbjct: 481 TSVKEVEEFLMQYRLVGGMVNRM 503
>gi|453083661|gb|EMF11706.1| signal recognition particle 54 kDa protein [Mycosphaerella
populorum SO2202]
Length = 519
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/435 (51%), Positives = 310/435 (71%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ ++ ++ A +DEK + + EI AL++ADV KLV ++ IK V
Sbjct: 1 MVLQDLGRRINASLNDITRAPTLDEKAFDGMIKEICSALMEADVNVKLVANLRKTIKSAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++L A NK+RIIQ+A+F+ L ++DP + + PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 KFNELPAHANKKRIIQKAVFDALVDIVDPHQKPYEPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A +GV FK
Sbjct: 121 LARWYQARGFKTCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVARDGVNQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH QE ALF EM ++ +A +P I V+D+SIGQAA Q++AFK +
Sbjct: 181 KEKFEIIIVDTSGRHHQEDALFAEMVEIQQAVSPHQTIMVLDASIGQAAEAQSRAFKDTA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P+++IGTGEH+ + E F+ + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGAAAGGGAISAVAATHTPIVYIGTGEHLLDLEKFNPQSFVSKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G M+ + + + +DQ+ E ++ ++EG FT+R + +Q QNI KMGP+ ++ M+PG S +
Sbjct: 301 QGLMEHV-QTLKLDQK-ETMKNITEGRFTVRDLRDQIQNISKMGPLSKMAGMIPGLSG-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M + E K+KR + + DSMT +ELDS ++ SR+ R+ARGSG VREV E+L
Sbjct: 358 MGGMDDAEGGDKLKRMIIICDSMTQKELDSDGKIFVDQPSRVTRVARGSGSSVREVEELL 417
Query: 420 EEYKRLAKIWSKMKG 434
+ K +A + K+KG
Sbjct: 418 AQQKMMAGVAKKVKG 432
>gi|367012263|ref|XP_003680632.1| hypothetical protein TDEL_0C05320 [Torulaspora delbrueckii]
gi|359748291|emb|CCE91421.1| hypothetical protein TDEL_0C05320 [Torulaspora delbrueckii]
Length = 527
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/443 (48%), Positives = 305/443 (68%), Gaps = 12/443 (2%)
Query: 1 MVLAQLGGSISRAIQ-QMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I ALL++DV KLV +++ N+K
Sbjct: 1 MVLADLGKRINSAVNGALSNTQDDYATTVDSMLKAIVTALLESDVNIKLVSKLRNNLKTK 60
Query: 60 VNLDDLAAGHNK-----RRIIQQAIFNELCKMLD--PGKPSFTPKKGKPSVIMFVGLQGS 112
+ LD A+G + +++IQ+A+F+ELC ++D G+P F PKK K +VIMFVGLQGS
Sbjct: 61 L-LDSKASGRSTSNGQVKKLIQKAVFDELCDLVDCQTGEP-FQPKKKKTNVIMFVGLQGS 118
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ ++G+K LVCADTFRAGAFDQLKQNA KA IPFYGSYTE++PV++A
Sbjct: 119 GKTTSCTKLAVYYARRGFKVGLVCADTFRAGAFDQLKQNAIKANIPFYGSYTETNPVKVA 178
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EGV FKKE ++IIVDTSGRH QE ALF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 179 AEGVAKFKKEKFEVIIVDTSGRHHQEEALFQEMVEISSVVKPNQTIMVLDASIGQAAEQQ 238
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK+S GA+++TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K FVS
Sbjct: 239 SRAFKESADFGAILLTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFVS 298
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ + M
Sbjct: 299 KLLGIGDIESLLEQFQTVSNKEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNIAQM 358
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQ 411
+PG + +M + E+E+ K+K+ + ++DSMT EEL+S ++ SR++R+ARGSG
Sbjct: 359 IPGMGN-MMSQVGEEETSKKMKKMVYVLDSMTREELESDGRIFIDQPSRMVRVARGSGTS 417
Query: 412 VREVMEMLEEYKRLAKIWSKMKG 434
V EV +L + + +AK+ K
Sbjct: 418 VFEVEMILMQQQMMAKMAQSTKA 440
>gi|365982761|ref|XP_003668214.1| hypothetical protein NDAI_0A08170 [Naumovozyma dairenensis CBS 421]
gi|343766980|emb|CCD22971.1| hypothetical protein NDAI_0A08170 [Naumovozyma dairenensis CBS 421]
Length = 539
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/504 (46%), Positives = 325/504 (64%), Gaps = 21/504 (4%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I ALL++DV LV ++++NIK
Sbjct: 1 MVLADLGKRINGAVNNALSNTEDDYTTTVDSMLKGIVTALLESDVNIALVSKVRSNIKSK 60
Query: 60 VNLDDLAAGHN-----KRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSG 113
+ ++ AA + +++IQ+ +F+ELC ++D K FTPKK K +VIMFVGLQGSG
Sbjct: 61 LLSENNAANRSVSNGQTKKLIQKTVFDELCNLVDCEVKEPFTPKKKKSNVIMFVGLQGSG 120
Query: 114 KTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAV 173
KTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV++
Sbjct: 121 KTTSCTKLAVYYQKRGFKVGLVCADTFRAGAFDQLKQNAIKARIPFYGSYTETDPVKVVE 180
Query: 174 EGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQA 233
EG+ FKKE ++IIVDTSGRH+QE LF+EM Q+S P+ I V+D+SIGQAA Q+
Sbjct: 181 EGITKFKKEKFEIIIVDTSGRHRQEEELFQEMIQISNVVKPNQTIMVLDASIGQAAEQQS 240
Query: 234 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 293
+AFK S GA+I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ +FE F K FVS+
Sbjct: 241 KAFKDSSDFGAIILTKMDGHAKGGGAISAVAATHTPIIFIGTGEHIHDFEKFSPKSFVSK 300
Query: 294 LLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 353
LLG+GD +++ V + ++ + +G FTL +Q Q ++KMGPI + M+
Sbjct: 301 LLGIGDIESLFEQLQTVSNKEDTQATMENIQKGKFTLLDFKKQMQTMMKMGPISNIAQMI 360
Query: 354 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQV 412
PG S+ + G E+ SQ K+K+ + + DSMT EEL+S + SR++R+ARGSG V
Sbjct: 361 PGMSNMMSQVGEEETSQ-KMKKMVYVFDSMTKEELESDGRMFIEQPSRMVRVARGSGTSV 419
Query: 413 REVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSR-----NM-NAQHMSKVLPQGMLKQ 466
EV +L + + +A + + G G+ + R NM N M K+ PQ M +
Sbjct: 420 LEVEMILMQQRMMANMAQNIGGAAAGASGQPGGMPRMPGMPNMPNIPGMPKMTPQLMQQA 479
Query: 467 IGGVGGLQNLMKQMGSTKDMMGMF 490
+ NLM K+MM MF
Sbjct: 480 QQKLSQNPNLM------KNMMNMF 497
>gi|366998227|ref|XP_003683850.1| hypothetical protein TPHA_0A03390 [Tetrapisispora phaffii CBS 4417]
gi|357522145|emb|CCE61416.1| hypothetical protein TPHA_0A03390 [Tetrapisispora phaffii CBS 4417]
Length = 537
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/445 (48%), Positives = 308/445 (69%), Gaps = 13/445 (2%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I ALL++DV +LV ++++NIK
Sbjct: 1 MVLADLGKRINGAVNSALSNTQDDYVTSVDNMLKMICTALLESDVNIQLVSKLRSNIKST 60
Query: 60 VNLDDLAAGHNK-------RRIIQQAIFNELCKMLD--PGKPSFTPKKGKPSVIMFVGLQ 110
+ +D L G +K +++IQ+++F+ELC ++D F PKK K +VIMFVGLQ
Sbjct: 61 L-MDALKTGGSKSTSNAQTKKLIQKSVFDELCNLVDFENNDNVFLPKKKKTNVIMFVGLQ 119
Query: 111 GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
GSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA KA IPFYGSY+E++PV+
Sbjct: 120 GSGKTTSCTKLAVYYQKRGFKVGLVCADTFRAGAFDQLKQNAIKAHIPFYGSYSEANPVK 179
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAF 230
+A EG+E FKKE ++IIVDTSGRH+QE ALF+EM ++S P+ I V+D+SIGQAA
Sbjct: 180 VAGEGIEKFKKEKFEVIIVDTSGRHRQEEALFQEMVEISNVVKPNQTIMVLDASIGQAAE 239
Query: 231 DQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 290
Q++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F
Sbjct: 240 QQSKAFKESADFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLERFSPKSF 299
Query: 291 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVF 350
VS+LLG+GD G +++ V + ++ + +G FTL +Q Q I+KMGP+ +
Sbjct: 300 VSKLLGIGDIEGLLEQFQTVSNSEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNIT 359
Query: 351 SMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSG 409
M+PG S+ +M + E+E+ K+K+ + ++DSMT EEL S +++ SR++R+ARGSG
Sbjct: 360 QMIPGMSN-IMNQVGEEETSKKMKKMIYVLDSMTKEELGSDGRLFIDEPSRMVRVARGSG 418
Query: 410 RQVREVMEMLEEYKRLAKIWSKMKG 434
V EV +L + + +A++ K
Sbjct: 419 TSVFEVEMILIQQQMMARMAQSTKA 443
>gi|302654843|ref|XP_003019220.1| hypothetical protein TRV_06769 [Trichophyton verrucosum HKI 0517]
gi|291182928|gb|EFE38575.1| hypothetical protein TRV_06769 [Trichophyton verrucosum HKI 0517]
Length = 504
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 298/443 (67%), Gaps = 7/443 (1%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
+ EI ALL ADV +LV++++ +IK V L + NK+R+IQ+A+F++L ++DP
Sbjct: 2 IKEICAALLSADVNVRLVQQLRKSIKAAVQLPSIPPAVNKKRLIQKAVFDQLVALVDPHA 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F PKKGK +VIM VGLQG+GKTTTCTK A ++Q KG+K ALVCADT RAGAFDQLKQN
Sbjct: 62 EPFKPKKGKSNVIMMVGLQGAGKTTTCTKLARHYQTKGFKAALVCADTLRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS T++DPV ++ EGV FKKE D+IIVDTSGRH+QE LF EM Q+ A
Sbjct: 122 ATKAKIPYYGSLTQTDPVVVSSEGVAKFKKERFDIIIVDTSGRHRQEEDLFAEMTQIQSA 181
Query: 212 TNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVI 271
PD I V+DS+IGQAA Q+ AFK + GA+I+TK DGHA GGGA+SAVAAT++P+I
Sbjct: 182 IKPDQTIMVLDSTIGQAAETQSAAFKSAADFGAIIITKTDGHAAGGGAISAVAATRTPII 241
Query: 272 FIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTL 330
F+GTGEHM + E F +PFV +LLGMGD + ++ + V E + +SEG FTL
Sbjct: 242 FLGTGEHMLDLERFAPRPFVQKLLGMGDMASLVEHVQAVTKDSAGAKETYKHISEGIFTL 301
Query: 331 RIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA-KIKRYMTMMDSMTNEELD 389
R E +I+KMGP+ ++ SM+PG S+ + G + E + K++R + + DSMT ELD
Sbjct: 302 RDFRENITSIMKMGPLSKISSMIPGLSN--ITSGLDDEDGSLKLRRMIYIFDSMTASELD 359
Query: 390 SSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSR 448
++ +R++R+A GSG VREV ++L ++K +A + K+ G K + + L
Sbjct: 360 GDGKVFVDQPTRVVRLACGSGTTVREVEDLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKG 419
Query: 449 NMNAQHMSKVLPQGMLKQIGGVG 471
Q M+ + Q + +GG G
Sbjct: 420 GNKEQQMAAM--QKRMAAMGGAG 440
>gi|440299675|gb|ELP92223.1| signal recognition particle 54 kDa protein, putative [Entamoeba
invadens IP1]
Length = 490
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/424 (50%), Positives = 298/424 (70%), Gaps = 5/424 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+QLG SI A+++M+ +T++DE+V+N L EI +LL DV KL+ M TNIK +
Sbjct: 1 MVLSQLGSSIVNALRKMTTSTVLDEEVINTLLKEIEASLLSEDVNPKLIAGMVTNIKSRI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N D+ G +KRR+I+ ++F EL ++DP F PKKGK SV+M VGLQG+GKTTT TK
Sbjct: 61 NATDIPEGVDKRRLIKDSVFEELINLVDPKTEPFKPKKGKTSVLMMVGLQGAGKTTTITK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y++ +G+KP++VCADTFRAGA++QL+ NA +A +PF+G ESDPV+ A GV+ F+
Sbjct: 121 LALYYKNRGYKPSVVCADTFRAGAYEQLQMNAKRAGVPFFGIKDESDPVKAASAGVKVFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+I+VDTSGRHKQ+ LF+EM+ V A NPD VIFVMD +IGQAAF QA+AF +V
Sbjct: 181 KEKNDIILVDTSGRHKQDTELFKEMQSVKSAINPDNVIFVMDGAIGQAAFAQAKAFHDAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+V++TK+DGH+ GGGALSAVAATKSP++FIGTGE ++E E FD + FV RLLGMGD
Sbjct: 241 DVGSVVITKLDGHSNGGGALSAVAATKSPIVFIGTGEKVNEIEEFDAESFVRRLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G + + +++ L EG+ T+R EQ N+ KMG +G + M+ G + +
Sbjct: 301 KGINKLAKDFAENPEYKTMIKHLQEGSLTVRDWKEQLTNLQKMGQLGNIMQMI-GLNHPM 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
G + K K + ++DSMT++ELD S ++ D SR+ R+A+GSGR +REV E+
Sbjct: 360 FQGGN---IEKKFKGFTVILDSMTDKELDGSAKAMLADESRMKRLAKGSGRDIREVGELF 416
Query: 420 EEYK 423
E+ K
Sbjct: 417 EQIK 420
>gi|452841447|gb|EME43384.1| hypothetical protein DOTSEDRAFT_72702 [Dothistroma septosporum
NZE10]
Length = 522
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/436 (50%), Positives = 312/436 (71%), Gaps = 6/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ ++ IDEK + + E+ AL++ADV KLV ++ IK V
Sbjct: 1 MVLADLGKRINSAVNDLTRGQTIDEKAFDGMVKEVCNALMEADVNIKLVAVLRKTIKNAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ NK+RIIQ+A+F+ L +++P + + PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 KFNEMPPHANKKRIIQKAVFDALVDIVNPHQTPYNPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A +GV FK
Sbjct: 121 LARWYQARGFKTCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVARDGVAQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH QE ALF EM ++ A P I V+D+SIGQAA Q++AFK++
Sbjct: 181 KERFEIIIVDTSGRHHQEDALFAEMVEIQGAVQPHQTIMVLDASIGQAAEAQSRAFKETA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P++FIGTGEH+ + E F+ + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGAAAGGGAISAVAATHTPIVFIGTGEHLLDLEKFNPESFVSKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++ + + +DQ+ E ++ ++EG F++R M +Q QNI+K+GP+ ++ M+PG S+ +
Sbjct: 301 QGLVEHVQS-LKLDQK-ETMKNITEGKFSVRDMRDQLQNIMKLGPLSKMAGMIPGLSN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND--SRIMRIARGSGRQVREVMEM 418
M ++E K+KR + + DSMT +ELD S+ K+ D +RI R+ARGSG VREV E+
Sbjct: 358 MGGVDDEEGGMKLKRMIYICDSMTQKELD-SDGKMFKDQPTRITRVARGSGTSVREVEEL 416
Query: 419 LEEYKRLAKIWSKMKG 434
L + + +A + KMKG
Sbjct: 417 LSQQQMMAGMAKKMKG 432
>gi|398393398|ref|XP_003850158.1| hypothetical protein MYCGRDRAFT_75124 [Zymoseptoria tritici IPO323]
gi|339470036|gb|EGP85134.1| hypothetical protein MYCGRDRAFT_75124 [Zymoseptoria tritici IPO323]
Length = 523
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/435 (50%), Positives = 308/435 (70%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + + EI+ AL++ADV KLV ++ IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSQTLDEKAFDGMIKEISNALVEADVSIKLVSTLRKTIKTSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L NKRRIIQ+A+F+ L ++DP + + P+KGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 KFSELPPSANKRRIIQKAVFDALVDIVDPHQKPYEPRKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A +GV FK
Sbjct: 121 LARWYQARGFKTCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVARDGVNQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH QE ALF EM ++ A P + V+D+SIGQAA Q++AFK++
Sbjct: 181 KERFEIIIVDTSGRHHQEDALFAEMTEIQSAVQPHQTVMVLDASIGQAAESQSRAFKETA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P+IFIGTGEH+ + E F+ + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGAAAGGGAISAVAATHTPIIFIGTGEHLLDMEKFNPQSFVSKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G M+ + + +DQ+ + ++ ++EG F++R + +Q QNI+KMGP+ ++ M+PG S +
Sbjct: 301 QGLMEHVQS-LRLDQK-DTMKNITEGKFSVRDLRDQLQNIMKMGPLSKMAGMIPGLSG-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E K+KR + + DSMT +ELDS ++ +R+ R+ARGSG VREV E+L
Sbjct: 358 MGGMDDEEGSMKLKRMIYICDSMTVKELDSDGKIFVDQPARMTRVARGSGTSVREVEELL 417
Query: 420 EEYKRLAKIWSKMKG 434
+ + + + KMKG
Sbjct: 418 TQQRMMGNMAKKMKG 432
>gi|50306973|ref|XP_453464.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642598|emb|CAH00560.1| KLLA0D09020p [Kluyveromyces lactis]
Length = 530
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/453 (47%), Positives = 308/453 (67%), Gaps = 13/453 (2%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN E + L EI ALL+ DV +LV ++ NIK
Sbjct: 1 MVLADLGKRINNAVTNAISNEQTDYETTVQSMLKEIATALLENDVNIRLVSRLRENIKNT 60
Query: 60 V----NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGK 114
+ N++ +++IQ+ +F+ELC ++D S F PKK + +VIMFVGLQGSGK
Sbjct: 61 LLSNANVNAKFTNAQTKKLIQKTVFDELCNLVDCEVTSPFQPKKRQSNVIMFVGLQGSGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KAKIPFYGSYTE +PV++A +
Sbjct: 121 TTSCTKLAVYYSKRGYKVGLVCADTFRAGAFDQLKQNAIKAKIPFYGSYTEPNPVKVAKD 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GV+ FKKE ++IIVDTSGRH+QE +LF+EM ++S+A P I V+D+SIGQAA Q++
Sbjct: 181 GVDKFKKEKFEIIIVDTSGRHQQEDSLFQEMVEISQAVKPKQTIMVLDASIGQAAEHQSK 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK+S G++I+TKMDGHA+GGGA+SAVA+T +P+IFIGTGEH+ +FE F K FVS+L
Sbjct: 241 AFKESADFGSIILTKMDGHARGGGAISAVASTNTPIIFIGTGEHIHDFEKFSPKSFVSKL 300
Query: 295 LGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
LG+GD M++ V D L+ + +G FTL Q Q I+KMGP+ + +M+P
Sbjct: 301 LGIGDIESLMERFQTVSDQDDAKNTLENIQQGKFTLLDFKNQMQTIMKMGPLSNIANMIP 360
Query: 355 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVR 413
G + ++ + E+E+ K+K + + DSMT +EL+S +++ SR++R+A+GSG V
Sbjct: 361 GMGN-MLNQFSEEETSKKMKTMVYIFDSMTKKELESDGRIFIDEPSRLVRVAKGSGTTVF 419
Query: 414 EVMEMLEEYK---RLAKIWSKMKGLKIPKKGEM 443
++ +L + + R+A+ +M GL P KG M
Sbjct: 420 DIEMLLMQQQMMARMAQTTKQMGGL--PTKGGM 450
>gi|302306335|ref|NP_982582.2| AAR041Wp [Ashbya gossypii ATCC 10895]
gi|299788468|gb|AAS50406.2| AAR041Wp [Ashbya gossypii ATCC 10895]
gi|374105781|gb|AEY94692.1| FAAR041Wp [Ashbya gossypii FDAG1]
Length = 514
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/470 (47%), Positives = 311/470 (66%), Gaps = 11/470 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKV-LNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ Q N D + L I ALL+ DV KLV +++NIK
Sbjct: 1 MVLADLGKRINAAVAQALNNDTDDYVAGVETMLKAIVTALLENDVNIKLVSSVRSNIKAR 60
Query: 60 VNLDDLA---AGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ D ++++Q+ +F ELC ++D ++ PKK K +V+MFVGLQG+GKTT
Sbjct: 61 LLADKSGRRMGQAQTKQLVQKTVFEELCALVDCQTAAYQPKKKKSNVVMFVGLQGAGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KAKIPFYGSYTE++PVR+A +GV
Sbjct: 121 SCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIKAKIPFYGSYTETNPVRVAADGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
FKKE ++IIVDTSGRH QE ALF+EM ++++ P+ I V+D+SIGQAA Q++AF
Sbjct: 181 AKFKKERFEIIIVDTSGRHHQEDALFQEMVEIAQEVKPNQTIMVLDASIGQAAEQQSRAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K++ GA+I+TKMDGHAKGGGA+SAVAATK+PVIFIGTGEH+ +FE F K FVS+LLG
Sbjct: 241 KEAADFGAIILTKMDGHAKGGGAISAVAATKTPVIFIGTGEHVHDFEKFSPKSFVSKLLG 300
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ + SM+PG
Sbjct: 301 IGDIESLLEQFQTVSNKEDTKATMENIQQGRFTLLDFQKQMQTIMKMGPLSNLASMIPGM 360
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREV 415
S +M E E+ K+K+ + ++DSM+ EEL+S +++ +R++R+ARGSG V EV
Sbjct: 361 SG-MMSGISEDETSRKMKKMVYVLDSMSREELESDGRVFIDEPARMLRVARGSGTSVFEV 419
Query: 416 MEMLEEYK---RLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQ 461
+L + + R+A+ M GL +P M LS M QH + L Q
Sbjct: 420 EMILMQQQMMARMAQGAKNMGGLPGMPAGPGMPRLSPQM-MQHAQQQLRQ 468
>gi|449297804|gb|EMC93821.1| hypothetical protein BAUCODRAFT_93699 [Baudoinia compniacensis UAMH
10762]
Length = 526
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/435 (50%), Positives = 306/435 (70%), Gaps = 4/435 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L +I AL +ADV +LV ++ IK V
Sbjct: 1 MVLQDLGRRINTAVTDLTRAPTLDEKAFDSMLRDIANALAEADVNIRLVANLRKTIKTTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L NK+RIIQ+A+F+ L +++P + + PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 KFSELPPSANKKRIIQKAVFDALVDIVNPHQTPYQPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++ +G+K LVCADTFRAGAFDQLKQNA KAKIP+YGS T++DPV +A +GVE FK
Sbjct: 121 LARWYMARGFKTCLVCADTFRAGAFDQLKQNAIKAKIPYYGSLTQTDPVVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH QE ALF EM ++ A P I V+D+SIGQAA Q++AFK++
Sbjct: 181 KERFEIIIVDTSGRHHQEDALFAEMVEIQNAVQPQQTIMVLDASIGQAAEAQSRAFKETA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P++FIGTGEH+ + E F+ + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGAAAGGGAISAVAATHTPIVFIGTGEHLLDLEKFNPQSFVSKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++ + + +DQ+ E ++ +SEG F++R M +Q NI+KMGP+ ++ M+PG S+ +
Sbjct: 301 QGLVEHVQS-LKLDQK-ETMKNISEGKFSVRDMRDQLGNIMKMGPLSKMAGMIPGLSN-M 357
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
M ++E K+KR + + DSMT +ELDS + SR+ R+ARGSG VREV E+L
Sbjct: 358 MGSMDDEEGSVKLKRMIYICDSMTVKELDSDGKCFVEQPSRMTRVARGSGTSVREVEELL 417
Query: 420 EEYKRLAKIWSKMKG 434
+++ +A + KMKG
Sbjct: 418 TQHRMMAGMAKKMKG 432
>gi|444321446|ref|XP_004181379.1| hypothetical protein TBLA_0F03220 [Tetrapisispora blattae CBS 6284]
gi|387514423|emb|CCH61860.1| hypothetical protein TBLA_0F03220 [Tetrapisispora blattae CBS 6284]
Length = 536
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/435 (48%), Positives = 298/435 (68%), Gaps = 8/435 (1%)
Query: 1 MVLAQLGGSISRAIQ-QMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN+ ++ L I ALL++DV KLV +M+ NIK
Sbjct: 1 MVLADLGKRINNAVNGALSNSKDDYTTTVDIMLKTIVTALLESDVNIKLVSQMRNNIKSK 60
Query: 60 VNLDDLAAGH----NKRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSGK 114
+ A+ +++IQ+ +F+ELC ++D F PKK + +VIMFVGLQGSGK
Sbjct: 61 LMESKTASSSVTNAQTKKLIQETVFDELCNLVDYKSDQPFQPKKRQTNVIMFVGLQGSGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KA IPF+GSYTE+DPV++A E
Sbjct: 121 TTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIKAHIPFFGSYTEADPVKVAAE 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
G+ FKKE D+IIVDTSGRH+QE LF+EM ++S P+ I V+D+SIGQAA Q++
Sbjct: 181 GIAKFKKEKFDIIIVDTSGRHRQEEELFKEMVEISNVVKPNQTIMVLDASIGQAAEQQSK 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ +FE F K FVS+L
Sbjct: 241 AFKDSSDFGAIILTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDFEKFSPKSFVSKL 300
Query: 295 LGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
LG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ + M+P
Sbjct: 301 LGIGDIESLLEQFQTVSNKEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNIAQMIP 360
Query: 355 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVR 413
G + LM + E+E+ K+K+ + ++DSMT +EL+S +++ SR++R+A+GSG V
Sbjct: 361 GMGN-LMSQVSEEETSQKMKKMVYVLDSMTKQELESDGRIFIDEPSRMVRVAKGSGTSVF 419
Query: 414 EVMEMLEEYKRLAKI 428
EV +L + + +A++
Sbjct: 420 EVEMILMQQQMMARM 434
>gi|255716822|ref|XP_002554692.1| KLTH0F11374p [Lachancea thermotolerans]
gi|238936075|emb|CAR24255.1| KLTH0F11374p [Lachancea thermotolerans CBS 6340]
Length = 534
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 304/438 (69%), Gaps = 5/438 (1%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-K 58
MVLA LG I+ A+ +SN+ ++ L I ALL++DV KLV ++ NI+ K
Sbjct: 1 MVLADLGKRINSAVNSALSNSQDDYVTTVDVMLKTIVTALLESDVNIKLVFSLRNNIRAK 60
Query: 59 IVNLDDLAAGHNK-RRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTT 117
++++ + + + +++IQ+ +F+ELC ++D F PKK K +VIMFVGLQGSGKTT+
Sbjct: 61 LLDVKSRSTNNAQTKKLIQKTVFDELCNLVDGETEPFQPKKRKQNVIMFVGLQGSGKTTS 120
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE++PV++A EGV
Sbjct: 121 CTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIKARIPFYGSYTETNPVKVAAEGVA 180
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
FKKE ++IIVDTSGRH+QE LF+EM ++S+ P+ I V+D+SIGQAA Q++AFK
Sbjct: 181 KFKKEKFEVIIVDTSGRHRQEEELFQEMVEISQVVKPNQTIMVLDASIGQAAEQQSKAFK 240
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
S GA+I+TKMDGHAKGGGA+SAVAATK+P+IFIGTGEH+ +FE F K F+S+LLG+
Sbjct: 241 DSSDFGAIILTKMDGHAKGGGAISAVAATKTPIIFIGTGEHVHDFEKFSPKSFISKLLGI 300
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
GD ++ + + ++ + +G FTL +Q Q I+KMGP+ + SM+PG
Sbjct: 301 GDIESLLEHFQTLSNKEDTKATMENIQQGKFTLLDFQKQMQTIMKMGPLSNIASMIPGMG 360
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVM 416
+ ++ + E+E+ ++K+ + +MDSMT +EL+S ++ SRI+R+ARGSG +V
Sbjct: 361 N-MLNQVSEEETTKRMKKMVFVMDSMTKQELESDGRIFIDQPSRIVRVARGSGTSAFDVE 419
Query: 417 EMLEEYKRLAKIWSKMKG 434
+L + + +A++ K
Sbjct: 420 MILMQQQMMARMAQSTKA 437
>gi|156844088|ref|XP_001645108.1| hypothetical protein Kpol_538p10 [Vanderwaltozyma polyspora DSM
70294]
gi|156115765|gb|EDO17250.1| hypothetical protein Kpol_538p10 [Vanderwaltozyma polyspora DSM
70294]
Length = 577
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/445 (47%), Positives = 303/445 (68%), Gaps = 12/445 (2%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-K 58
MVLA LG I+ A+ +SN ++ L I ALL+ADV +LV +++ NIK K
Sbjct: 1 MVLADLGKRINSAVNSALSNTQDDYATAVDILLKNIVTALLEADVNIQLVSKLRANIKAK 60
Query: 59 IVN-----LDDLAAGHNKRRIIQQAIFNELCKMLDPG---KPSFTPKKGKPSVIMFVGLQ 110
+++ + + +++IQ+ +F+ELC ++D + F PKK K ++IMFVGLQ
Sbjct: 61 LLDQNSNNNNQTSKSGQTKKLIQKTVFDELCNLVDGNTDQQQQFIPKKRKTNIIMFVGLQ 120
Query: 111 GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
GSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA KA IPFYGSYTE+DPVR
Sbjct: 121 GSGKTTSCTKLAVYYQKRGFKVGLVCADTFRAGAFDQLKQNAIKAHIPFYGSYTEADPVR 180
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAF 230
+A EG+ FKKE D+IIVDTSGRH+QE LF+EM ++S P+ I V+D+SIGQAA
Sbjct: 181 VASEGIAKFKKEKFDIIIVDTSGRHRQEEQLFQEMIEISNEIKPNQTIMVLDASIGQAAE 240
Query: 231 DQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 290
Q++AFK+S GA+I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K F
Sbjct: 241 QQSKAFKESSDFGAIILTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSF 300
Query: 291 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVF 350
VS+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ +
Sbjct: 301 VSKLLGIGDIESLFEQLQTVSNKEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNIT 360
Query: 351 SMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSG 409
M+PG ++ LM + E+E+ K+K+ + ++DSMT EEL+S ++ +R++R+A+GSG
Sbjct: 361 QMIPGMNN-LMNQVGEEETSQKMKKMIYVLDSMTKEELESDGRIFIDQPTRMVRVAKGSG 419
Query: 410 RQVREVMEMLEEYKRLAKIWSKMKG 434
V EV +L + + +A++ K
Sbjct: 420 TSVFEVEMILMQQQMMARMAQSTKA 444
>gi|342321672|gb|EGU13604.1| Signal recognition particle 54 kDa protein, putative [Rhodotorula
glutinis ATCC 204091]
Length = 612
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/506 (43%), Positives = 323/506 (63%), Gaps = 73/506 (14%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++ AI ++ + IDE+ L+ L + ALL++DV LV+ ++ +K V
Sbjct: 1 MVLQDLGKRLNTAINSLTQQSAIDEQALDAVLKSVCAALLESDVNVLLVKRLRDKVKGKV 60
Query: 61 --NLDDLAA----------GHNKRRIIQQAIFNELCKMLDPGK---PSFTPKKGKPSVIM 105
L+++ A G+ ++IIQ+AI++EL ++DPG P+F P KGK VIM
Sbjct: 61 LPQLEEIQAKQGQDADAMQGNKAKQIIQKAIYDELVALVDPGDAAPPAFNPVKGKTQVIM 120
Query: 106 FVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTE 165
VGLQG+GKTTTCTK A ++Q++G K ALVCADTFRAGAFDQLKQNATKAK+PF+GSYTE
Sbjct: 121 MVGLQGAGKTTTCTKLATHYQRRGLKVALVCADTFRAGAFDQLKQNATKAKVPFFGSYTE 180
Query: 166 SDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSI 225
+DPV I+++GV F+ E D+IIVDTSGRH+QE+ LF+EMRQ+ +A P++V+ V+D +I
Sbjct: 181 TDPVSISLQGVTKFRSERFDVIIVDTSGRHRQESELFDEMRQIQDAVEPNMVVLVLDGAI 240
Query: 226 GQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVF 285
GQAA Q++AFK++ + GA+IVTK+DGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F
Sbjct: 241 GQAAEAQSRAFKEASNFGAIIVTKLDGHAKGGGAISAVAATNTPIIFIGTGEHLHDLEKF 300
Query: 286 DVKPFVSRLLGMGDWSGFMDKIHE--VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKM 343
+PF+S++LGMGD G +++ E + ++Q ++++KL +G FT+R + +Q ++ M
Sbjct: 301 SPQPFISKMLGMGDMQGLVERAQEMALANPERQEKMMKKLEKGEFTVRDLKDQLATVMGM 360
Query: 344 ----------------------------GPIGQVFSMLPGFSSELMPKGREKESQAKIKR 375
GP+ + SM+PG S + G E S+ ++KR
Sbjct: 361 CVAGSFLRSSRSTAFELLTGKCRAYAYRGPLSNLASMIPGMSEMMGGGGEEDVSR-RMKR 419
Query: 376 YMTMMDSMTNEELDS-------------------------SNPKLMND--SRIMRIARGS 408
+ DSMT EELDS SNP + + R++R+ARGS
Sbjct: 420 VAFIFDSMTTEELDSDGSLFRDSVPSAKGKEKEKDEEKDPSNPMGLREPNKRVLRVARGS 479
Query: 409 GRQVREVMEMLEEYKRLAKIWSKMKG 434
G V+EV E+L +++ AK+ +M G
Sbjct: 480 GTSVQEVEELLAQHQMFAKMAKRMGG 505
>gi|410084092|ref|XP_003959623.1| hypothetical protein KAFR_0K01340 [Kazachstania africana CBS 2517]
gi|372466215|emb|CCF60488.1| hypothetical protein KAFR_0K01340 [Kazachstania africana CBS 2517]
Length = 528
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/443 (46%), Positives = 304/443 (68%), Gaps = 11/443 (2%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +S+A ++ L IT ALL++DV +LV ++ NIK
Sbjct: 1 MVLADLGKRINSAVNNALSSAQSDYSTTIDNMLKAITTALLESDVNIQLVSRLRNNIKSK 60
Query: 60 V-----NLDDLAAGHNKRRIIQQAIFNELCKMLD--PGKPSFTPKKGKPSVIMFVGLQGS 112
+ N ++ G K+ +IQ+ +++ELC ++D G+ F PKK + ++IMFVGLQGS
Sbjct: 61 LMESKGNTKSVSNGQTKK-LIQKTVYDELCALVDCNDGQEPFRPKKKQSNIIMFVGLQGS 119
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV++A
Sbjct: 120 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIKARIPFYGSYTETDPVKVA 179
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE ++IIVDTSGRH QE +LF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 180 AEGIAKFKKEKFEIIIVDTSGRHHQEESLFQEMVEISRVVKPNQTIMVLDASIGQAAEQQ 239
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F + F+S
Sbjct: 240 SKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPQSFIS 299
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
+LLG+GD + + V + ++ + +G FTL +Q Q I+KMGP+ + M
Sbjct: 300 KLLGIGDMESLFETLQTVTNKEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNIAQM 359
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQ 411
+PG + +M + E+E+ +K+ + ++DSMT EEL+S +++ SR++R+ARGSG
Sbjct: 360 IPGMGN-MMNQVGEEETSRSMKKMVYVLDSMTKEELESDGRIFIDEPSRMVRVARGSGTS 418
Query: 412 VREVMEMLEEYKRLAKIWSKMKG 434
V +V +L++ + +A++ +K
Sbjct: 419 VIDVEMILQQQQMMARMAQSVKA 441
>gi|328861050|gb|EGG10154.1| hypothetical protein MELLADRAFT_115576 [Melampsora larici-populina
98AG31]
Length = 617
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/465 (45%), Positives = 308/465 (66%), Gaps = 39/465 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A + +IDEK ++ L + ALL +DV LV ++ +K V
Sbjct: 1 MVLADLGKKINAAFADLQRTPLIDEKAVDSLLKGLATALLGSDVNVGLVSNLRNRVKSKV 60
Query: 61 N--LDDLAAGHNKRR-IIQQAIFNELCKMLDPGKPS------------FTPKKGKPSVIM 105
L+ L + K++ ++Q+ +++EL +++P S + PKKGKP+VIM
Sbjct: 61 TPQLEKLISSPAKQKQLVQKTVYDELVALVNPTAASSDATSSSSLALPWQPKKGKPNVIM 120
Query: 106 FVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTE 165
FVGLQGSGKTT+CTK A Y+Q+KG++ ALVCADTFRAGAFDQLKQNA +AK+PF+GS+TE
Sbjct: 121 FVGLQGSGKTTSCTKLAVYYQRKGFRTALVCADTFRAGAFDQLKQNAARAKVPFFGSHTE 180
Query: 166 SDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSI 225
+DP+RI+ GV FK+E ++IIVDTSGRH+QE LFEEM+Q+S A P+L I V+D +I
Sbjct: 181 TDPIRISAAGVTKFKRERFEVIIVDTSGRHRQETELFEEMKQISSAVQPNLTIMVLDGAI 240
Query: 226 GQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVF 285
GQAA Q +AFK++ GA+IVTKMDGHAKGGGA+SAVAAT++P++FIGTGEH+ + E F
Sbjct: 241 GQAAEAQTRAFKEAAGFGAIIVTKMDGHAKGGGAISAVAATQTPIMFIGTGEHIHDLERF 300
Query: 286 DVKPFVSRLLGMGDWSGFMDKIHEV---VPMDQQPELLQKLSEGNFTLRIMYEQFQNILK 342
PF+S++LGM D GF++K+ ++ P ++ E+ +++ G FTLR + +Q N+ +
Sbjct: 301 SPGPFISKVLGMADVDGFLEKMQDLQQSTPAHKREEMRERMERGEFTLRDLRDQMTNVAQ 360
Query: 343 MGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-----PKLMN 397
MGP+ ++ SM+PG + M G + + +K+KR + + D+M+ +ELDS PK
Sbjct: 361 MGPLSKIASMIPGMGA--MFGGNDDDMSSKMKRMLFIFDAMSPKELDSDGQLFRAPKAQK 418
Query: 398 DS--------------RIMRIARGSGRQVREVMEMLEEYKRLAKI 428
RI+RIARGSG V EV M+ ++ +A +
Sbjct: 419 KDTNGMDEGVPREPHPRILRIARGSGTSVDEVEAMIAQHVMVATM 463
>gi|260941516|ref|XP_002614924.1| hypothetical protein CLUG_04939 [Clavispora lusitaniae ATCC 42720]
gi|238851347|gb|EEQ40811.1| hypothetical protein CLUG_04939 [Clavispora lusitaniae ATCC 42720]
Length = 569
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/459 (47%), Positives = 306/459 (66%), Gaps = 28/459 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + E + + I ALL++DV +LV ++ NI++ +
Sbjct: 21 MVLADLGSRLRNALGSVESGS---EDEVQNMIKNICSALLESDVNVRLVARLRDNIRQKI 77
Query: 61 NLDDLAAGH---NKRRIIQQAIFNELCKMLD-------PGKPSFT---------PKK--G 99
++ +A NKR+ +Q+ +F+ELC ++D P K S T PKK
Sbjct: 78 AVEIKSANESSANKRKKLQKIVFDELCGLVDSHEEPPKPKKLSQTKSVAKHGKKPKKIAA 137
Query: 100 KPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPF 159
+ VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA K+ IPF
Sbjct: 138 ESHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKSNIPF 197
Query: 160 YGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIF 219
YGSY E+DPV++A EGV+ FK++ D+IIVDTSGRHKQE +LF EM Q+SEA P I
Sbjct: 198 YGSYLETDPVKVAYEGVKKFKEDKFDIIIVDTSGRHKQEQSLFNEMVQISEAVQPTQTIM 257
Query: 220 VMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHM 279
VMD+SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAAT++P++FIGTGEH+
Sbjct: 258 VMDASIGQAAEGQAKAFKESSNFGSIILTKMDGHAKGGGAISAVAATETPIVFIGTGEHV 317
Query: 280 DEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQ--PELLQKLSEGNFTLRIMYEQF 337
+FEVF F+S+LLG+GD ++ + + D + + L+ EG FTLR Q
Sbjct: 318 GDFEVFKPSTFISKLLGIGDVQSLIEHVQSLNLQDDENHKKTLENFKEGKFTLRDFQTQM 377
Query: 338 QNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN 397
N LKMGP+ + SM+PG S+ +M + E+E+ KIK + +MDSMT +ELDS
Sbjct: 378 NNFLKMGPLTNIASMIPGMSN-IMNQVGEEETSKKIKNMIYIMDSMTAQELDSDGQLFTK 436
Query: 398 D-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGL 435
+ +RI+R+ARGSG EV +L++ + +A + K +
Sbjct: 437 EPTRILRVARGSGCSAVEVEMVLQQQRMMATMAGTAKAM 475
>gi|254580797|ref|XP_002496384.1| ZYRO0C17138p [Zygosaccharomyces rouxii]
gi|238939275|emb|CAR27451.1| ZYRO0C17138p [Zygosaccharomyces rouxii]
Length = 536
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/442 (47%), Positives = 299/442 (67%), Gaps = 12/442 (2%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I ALL++DV KLV +++ N++
Sbjct: 1 MVLADLGKRINTAVNSALSNTQDDYATTVDVMLKTIVTALLESDVNIKLVSKLRNNLR-- 58
Query: 60 VNLDDLAAGHNK------RRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGS 112
+ L D +G+ +++IQ+ +F ELC ++D + F PKK K +VIMFVGLQGS
Sbjct: 59 IKLLDSKSGNKSTTNAQTKKLIQKTVFEELCDLVDCKSEQPFQPKKKKTNVIMFVGLQGS 118
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ ++G+K LVCADTFRAGAFDQLKQNA KA IPFYGSY E+DPV++A
Sbjct: 119 GKTTSCTKLAVYYSRRGFKVGLVCADTFRAGAFDQLKQNAIKAHIPFYGSYVETDPVKVA 178
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE ++IIVDTSGRH QE ALF+EM ++S NP+ I V+D+SIGQAA Q
Sbjct: 179 AEGIAKFKKEKFEVIIVDTSGRHHQEEALFQEMVEISTVVNPNQTIMVLDASIGQAAEQQ 238
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK++ GA+++TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S
Sbjct: 239 SKAFKETADFGAILLTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLERFSPKSFIS 298
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
+LLG+GD +++ V + ++ L +G FTL +Q Q I+KMGP+ + M
Sbjct: 299 KLLGIGDIESLLEQFQTVSNTEDTKATMENLQQGKFTLLDFKKQMQTIMKMGPLSNIAQM 358
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQ 411
+PG + + G E+ SQ K+K+ + ++DSMT +EL+S ++ SR++R+A+GSG
Sbjct: 359 IPGMGNMMSQVGEEETSQ-KMKKMVYVLDSMTRQELESDGRIFVDQPSRLVRVAKGSGTS 417
Query: 412 VREVMEMLEEYKRLAKIWSKMK 433
V EV +L + + +A++ K
Sbjct: 418 VFEVEMILMQQQMMARMAQTTK 439
>gi|295666878|ref|XP_002793989.1| signal recognition particle 54 kDa protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226277642|gb|EEH33208.1| signal recognition particle 54 kDa protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 530
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/439 (49%), Positives = 300/439 (68%), Gaps = 5/439 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ IDE+ + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSSNIDEQAFDAMIKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +V+MFVGLQG+GKTTTCTK
Sbjct: 61 QFSSLPPAVNKKRLIQKTVFDQLVALVDPHCEPFKPKKGRSNVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQEA LF EM Q+ A PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEADLFAEMTQIQTAIKPDQTILVLDGTIGQAAEIQSSAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGAAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+G ++ + V E + ++ G FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 301 AGLVEHVQAVTKDSATAKETYKHITAGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN- 359
Query: 360 LMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 417
+ G + E + K++R + + DSMT ELD ++ SRI+R+A GSG VREV +
Sbjct: 360 -ITSGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFIDQPSRIVRVACGSGTTVREVED 418
Query: 418 MLEEYKRLAKIWSKMKGLK 436
+L ++K +A + K+ G K
Sbjct: 419 LLSQHKMMAGMAKKVGGQK 437
>gi|238879597|gb|EEQ43235.1| signal recognition particle 54 kDa protein [Candida albicans WO-1]
Length = 556
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/449 (47%), Positives = 303/449 (67%), Gaps = 27/449 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ + + +I ALL++DV KLV +++ NIK +
Sbjct: 1 MVLADLGSRLRGALSSVESGS--DDEI-QQMIKDICSALLESDVNVKLVAKLRGNIKNKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS--------------- 102
N+ + NKR+ +Q+ IF+ELC ++D PKK S
Sbjct: 58 DESNVSKETSAMNKRKKLQKIIFDELCALVDSNVEPPKPKKLSTSTKTINGKKVRLSKES 117
Query: 103 --VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA P I V
Sbjct: 178 GSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQPTQTIMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHVG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLRIMYEQFQ 338
+ E+F F+S+LLG+GD G ++ + + + D+ + ++ + EG FTLR Q
Sbjct: 298 DLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLRDFQNQMN 357
Query: 339 NILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND 398
N LKMGP+ + SM+PG S+ +M + ++E+ KIK + +MDSMT +EL+S + +
Sbjct: 358 NFLKMGPLTNIASMIPGLSN-IMSQVGDEETSKKIKNMIYIMDSMTTKELESDGRIFIKE 416
Query: 399 -SRIMRIARGSGRQVREVMEMLEEYKRLA 426
SRI+R+ARGSG V EV +L++++ ++
Sbjct: 417 PSRIVRVARGSGCAVVEVEMILQQHRMMS 445
>gi|331223009|ref|XP_003324178.1| signal recognition particle subunit SRP54 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309303168|gb|EFP79759.1| signal recognition particle subunit SRP54 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 635
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/469 (45%), Positives = 304/469 (64%), Gaps = 41/469 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A ++ +ID+K L+ L I+ ALL +DV LV ++ +K +
Sbjct: 1 MVLADLGKKINAAFSELQRTPLIDDKALDLLLKGISAALLSSDVNVTLVANLRNRVKSKL 60
Query: 61 N--LDDLAAGHNKRR-IIQQAIFNELCKMLDPGK---------------PSFTPKKGKPS 102
+ L+ L K++ ++ + +F+EL ++ P + PKKGKP+
Sbjct: 61 SPQLEKLIQSPAKQKQLVHKTVFDELVALVSPTGSASDHASSSSRTTEYTPWQPKKGKPN 120
Query: 103 VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGS 162
VIMFVGLQGSGKTT+CTK A Y+++KG+K ALVCADTFRAGAFDQLKQNATKAKIPFYGS
Sbjct: 121 VIMFVGLQGSGKTTSCTKLAVYYRRKGFKTALVCADTFRAGAFDQLKQNATKAKIPFYGS 180
Query: 163 YTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMD 222
+TE+DP+ I+ GV FK+E ++IIVDTSGRH+QE LFEEM+Q+S P+L I V+D
Sbjct: 181 HTETDPIAISTAGVTRFKRERFEVIIVDTSGRHRQETELFEEMKQISAGVTPNLTIMVLD 240
Query: 223 SSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEF 282
+IGQAA Q +AFK++ GA+IVTKMDGHAKGGGA+SAVAA ++P++FIGTGEH+ +
Sbjct: 241 GAIGQAAEAQTRAFKEAADFGAIIVTKMDGHAKGGGAISAVAAAQTPIMFIGTGEHLHDL 300
Query: 283 EVFDVKPFVSRLLGMGDWSGFMDKIHEV---VPMDQQPELLQKLSEGNFTLRIMYEQFQN 339
E F +PF+S+LLGMGD F++ + ++ P + E+ Q++ G FT+R + +Q N
Sbjct: 301 ERFAPEPFISKLLGMGDIGEFLETMQDLQSATPSQNREEMRQRIERGVFTIRDLRDQMSN 360
Query: 340 ILKMGPIGQVFSMLPGFSSELMPKGRE-KESQAKIKRYMTMMDSMTNEELDS-------- 390
+ +MG I ++ SM+PG S+ + G + E K+KR + + D+M+ +ELDS
Sbjct: 361 LTQMGSISKIASMIPGMSNMMAGLGGDGDEMSQKMKRMVFIFDAMSPQELDSDGSIFRKK 420
Query: 391 ----SNPKLMNDS-------RIMRIARGSGRQVREVMEMLEEYKRLAKI 428
N + + D R++RIARGSG V EV ML ++ A +
Sbjct: 421 RRTGDNTRQLADGEPREPHPRVLRIARGSGTSVDEVEGMLAQHAMFATM 469
>gi|366996675|ref|XP_003678100.1| hypothetical protein NCAS_0I00870 [Naumovozyma castellii CBS 4309]
gi|342303971|emb|CCC71755.1| hypothetical protein NCAS_0I00870 [Naumovozyma castellii CBS 4309]
Length = 585
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 235/501 (46%), Positives = 326/501 (65%), Gaps = 15/501 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKV-LNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D V ++ L I ALL++DV LV ++ NIK
Sbjct: 62 MVLADLGKRINGAVNNALSNTSDDYAVNVDTMLKAIVTALLESDVNIALVSRLRNNIKSK 121
Query: 60 VNLDDLAAGHNK---RRIIQQAIFNELCKMLDPG-KPSFTPKKGKPSVIMFVGLQGSGKT 115
+ A+G +++IQ+ +F+ELC ++D K F PKK + +VIMFVGLQGSGKT
Sbjct: 122 LMAQKPASGSTNAQTKKLIQKTVFDELCNLVDCDVKEPFNPKKKQCNVIMFVGLQGSGKT 181
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
T+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV++A EG
Sbjct: 182 TSCTKLAVYYQKRGFKVGLVCADTFRAGAFDQLKQNAIKARIPFYGSYTETDPVQVADEG 241
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
++ FKKE ++IIVDTSGRH+QE ALF+EM ++S P+ I V+D+SIGQAA Q++A
Sbjct: 242 IKKFKKEKFEIIIVDTSGRHRQEEALFQEMIEISHVVKPNQTIMVLDASIGQAAEQQSKA 301
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK S GA+I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ +FE F K FVS+LL
Sbjct: 302 FKDSSDFGAIILTKMDGHAKGGGAISAVAATHTPIIFIGTGEHVHDFEKFSPKSFVSKLL 361
Query: 296 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 355
G+GD M++I V + +++ + +G FTL +Q Q I+KMGP+ + M+PG
Sbjct: 362 GIGDIESLMEQIQTVSNEEDTKAVMENIQQGKFTLLDFKKQMQTIMKMGPLSNIAQMIPG 421
Query: 356 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVRE 414
S+ +M + E E+ +K+KR + ++DSMT EELDS + SR++R+A+GSG V E
Sbjct: 422 MSN-MMNQVGEDEASSKMKRMIYVLDSMTKEELDSDGRIFIEQPSRMIRVAKGSGTSVFE 480
Query: 415 VMEMLEEYKRLAKIW--SKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGG 472
+ +L + + A + +K G + N M K+ PQ M++Q
Sbjct: 481 IEGILMQQRMFASMAQSAKAGGAGAGGMPGAGGMPGMPNMPGMPKISPQ-MMQQ-----A 534
Query: 473 LQNLMKQMGSTKDMMGMFGGG 493
Q L + G ++M MFGG
Sbjct: 535 QQRLRQNPGMMQNMQNMFGGA 555
>gi|241957976|ref|XP_002421707.1| signal recognition particle (SRP) subunit, piutative [Candida
dubliniensis CD36]
gi|223645052|emb|CAX39646.1| signal recognition particle (SRP) subunit, piutative [Candida
dubliniensis CD36]
Length = 567
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/449 (47%), Positives = 308/449 (68%), Gaps = 27/449 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ ++ + +I ALL++DV KLV +++ NIK +
Sbjct: 1 MVLADLGSRLRGALSSVESGS--DDEI-SQMIKDICSALLESDVNVKLVAKLRGNIKNKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKP--------SFTPKKGKPS--- 102
N+ + NKR+ +Q+ IF+ELC ++D P KP + KK + S
Sbjct: 58 EEANVSKETSAMNKRKKLQKIIFDELCALVDSNVEPPKPKKLSTSTKTINGKKVRVSKES 117
Query: 103 --VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA P + V
Sbjct: 178 GSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQPSQTVMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHVG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLRIMYEQFQ 338
+ E+F F+S+LLG+GD G ++ + + + D+ + ++ + EG FTL+ Q
Sbjct: 298 DLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLKDFQNQMN 357
Query: 339 NILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND 398
N LKMGP+ + SM+PG S+ +M + ++E+ KIK + +MDSMT +EL+S + +
Sbjct: 358 NFLKMGPLTNIASMIPGLSN-IMSQVGDEETSKKIKNMIYIMDSMTTKELESDGRIFIKE 416
Query: 399 -SRIMRIARGSGRQVREVMEMLEEYKRLA 426
SRI+R+ARGSG V EV +L++++ ++
Sbjct: 417 PSRIVRVARGSGCAVVEVEMILQQHRMMS 445
>gi|68475987|ref|XP_717934.1| hypothetical protein CaO19.3243 [Candida albicans SC5314]
gi|68476118|ref|XP_717868.1| hypothetical protein CaO19.10753 [Candida albicans SC5314]
gi|46439602|gb|EAK98918.1| hypothetical protein CaO19.10753 [Candida albicans SC5314]
gi|46439670|gb|EAK98985.1| hypothetical protein CaO19.3243 [Candida albicans SC5314]
Length = 556
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/449 (47%), Positives = 303/449 (67%), Gaps = 27/449 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ + + +I ALL++DV KLV +++ NIK +
Sbjct: 1 MVLADLGSRLRGALSSVESGS--DDEI-QQMIKDICSALLESDVNVKLVAKLRGNIKNKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS--------------- 102
N+ + NKR+ +Q+ IF+ELC ++D PKK S
Sbjct: 58 DESNVSKETSAMNKRKKLQKIIFDELCALVDSNVEPPKPKKLSTSTKTINGKKVRLSKES 117
Query: 103 --VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA P I V
Sbjct: 178 GSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQPTQTIMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHVG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLRIMYEQFQ 338
+ E+F F+S+LLG+GD G ++ + + + D+ + ++ + EG FTLR Q
Sbjct: 298 DLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLRDFQNQMN 357
Query: 339 NILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND 398
N LKMGP+ + SM+PG S+ +M + ++E+ KIK + +MDSMT +EL+S + +
Sbjct: 358 NFLKMGPLTNIASMIPGLSN-IMSQVGDEETSKKIKNMIYIMDSMTIKELESDGRIFIKE 416
Query: 399 -SRIMRIARGSGRQVREVMEMLEEYKRLA 426
SRI+R+ARGSG V EV +L++++ ++
Sbjct: 417 PSRIVRVARGSGCAVVEVEMILQQHRMMS 445
>gi|403214075|emb|CCK68576.1| hypothetical protein KNAG_0B01290 [Kazachstania naganishii CBS
8797]
Length = 537
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/442 (47%), Positives = 297/442 (67%), Gaps = 12/442 (2%)
Query: 1 MVLAQLGGSISRAIQQM-SNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG ++ A+ SN ++ L I ALL++DV LV ++ NI+
Sbjct: 1 MVLANLGKRLNSAVNXXXSNPDDDYATTVDTMLKGIVTALLESDVNIALVSRLRGNIR-- 58
Query: 60 VNLDDLAAGHNK------RRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGS 112
L D AAG ++++ + +F ELC ++D F PKK + +VIMFVGLQGS
Sbjct: 59 ATLLDGAAGAKSMSNAQTKKLVHKVVFEELCNLVDCHASEPFKPKKKQTNVIMFVGLQGS 118
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV++A
Sbjct: 119 GKTTSCTKLAVYYHKRGFKVGLVCADTFRAGAFDQLKQNAIKARIPFYGSYTETDPVKVA 178
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE +++IVDTSGRH+QE LF+EM ++ + P+ I V+D+SIGQAA Q
Sbjct: 179 EEGITKFKKEKFEIVIVDTSGRHRQEEELFKEMVEIGKVVKPNQTIMVLDASIGQAAEQQ 238
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK S + GA+I+TKMDGHAKGGGA+SA+AAT +P+IFIGTGEH+ +FE F K FVS
Sbjct: 239 SKAFKDSSNFGAIILTKMDGHAKGGGAISAIAATNTPIIFIGTGEHIHDFEKFSPKSFVS 298
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
+LLG+GD+ G M++ + + LL+ + +G FTL +Q Q I+KMGP+ + M
Sbjct: 299 KLLGIGDFEGLMEQFQTISNKEDTQALLENIQQGKFTLLDFQKQMQTIMKMGPLSNIAQM 358
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQ 411
+PG + +M + E E+ +K+ + M+DSMT EL+S +++ SR++R+ARGSG
Sbjct: 359 IPGMGN-MMNQIGEDEASKSMKKMVYMLDSMTKRELESDGRCFIDEPSRMVRVARGSGTS 417
Query: 412 VREVMEMLEEYKRLAKIWSKMK 433
V +V +L + + +A++ K
Sbjct: 418 VFDVETLLMQQQMMARMAQTAK 439
>gi|3334344|sp|O42816.1|SRP54_CANAL RecName: Full=Signal recognition particle 54 kDa protein homolog
gi|2739331|emb|CAA10999.1| Srp54 protein [Candida albicans]
Length = 556
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/449 (47%), Positives = 302/449 (67%), Gaps = 27/449 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ + + +I ALL++DV KLV +++ NIK +
Sbjct: 1 MVLADLGSRLRGALSSVESGS--DDEI-QQMIKDICSALLESDVNVKLVAKLRGNIKNKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS--------------- 102
N+ + NKR+ +Q+ IF+ELC ++D PKK S
Sbjct: 58 DESNVSKETSAMNKRKKLQKIIFDELCALVDSNVEPPKPKKLSTSTKTINGKKVRLSKES 117
Query: 103 --VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA P I V
Sbjct: 178 GSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQPTQTIMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHVG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLRIMYEQFQ 338
+ E+F F+S+LLG+GD G ++ + + + D+ + ++ + EG FTLR Q
Sbjct: 298 DLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLRDFQNQMN 357
Query: 339 NILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND 398
N LKMGP+ + SM+PG S+ +M + ++E+ KIK + +MDSMT +EL+ + +
Sbjct: 358 NFLKMGPLTNIASMIPGLSN-IMSQVGDEETSKKIKNMIYIMDSMTTKELECDGRIFIKE 416
Query: 399 -SRIMRIARGSGRQVREVMEMLEEYKRLA 426
SRI+R+ARGSG V EV +L++++ ++
Sbjct: 417 PSRIVRVARGSGCAVVEVEMILQQHRMMS 445
>gi|50292271|ref|XP_448568.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527880|emb|CAG61531.1| unnamed protein product [Candida glabrata]
Length = 532
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 310/475 (65%), Gaps = 17/475 (3%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I+ ALL+ADV LV +++ NI+ +
Sbjct: 1 MVLADLGKRINNAVNSALSNTEDDYVNSIDGMLKGISTALLEADVNIMLVSKVRNNIRSV 60
Query: 60 VNLDDLAAGHN-----KRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSG 113
+ LD+ + ++++Q+ +F+ELC ++D F PKK ++IMFVGLQGSG
Sbjct: 61 L-LDNKTTNRSMNNVQTKKLVQKTVFDELCGLVDCTDHKVFQPKKKATNIIMFVGLQGSG 119
Query: 114 KTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAV 173
KTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV++A
Sbjct: 120 KTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAVKARIPFYGSYTETDPVKVAG 179
Query: 174 EGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQA 233
+G+ FKKE D+IIVDTSGRH QE LF EM Q+S P+ I V+D+SIGQAA Q+
Sbjct: 180 DGIAKFKKEKFDVIIVDTSGRHHQEEELFHEMVQISNVIKPNQTIMVLDASIGQAAEQQS 239
Query: 234 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 293
+AFK+S GA+I+TKMDGHAKGGGA+SAVAAT +P+ FIGTGEH+ + E F K F+S+
Sbjct: 240 KAFKESSDFGAIILTKMDGHAKGGGAISAVAATNTPIAFIGTGEHIHDLEKFSPKSFISK 299
Query: 294 LLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 353
LLG+GD G +++ V + ++ + +G FTL +Q Q I+KMGP+ + M+
Sbjct: 300 LLGIGDIEGLFEQLKTVSNKEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNIAQMI 359
Query: 354 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQV 412
PG + + G E+ SQ K+K+ + ++DSMT EEL+S ++ SR++R+ARGSG V
Sbjct: 360 PGMGNMMSQVGEEETSQ-KMKKMVYVLDSMTKEELESDGRIFIDQPSRLVRVARGSGTSV 418
Query: 413 REVMEMLEEYKRLAKIWSKMK----GLKIPKKGEMSALSRNMNAQHMSKVLPQGM 463
+V +L + + +A++ K G +P M+ + N M K+ PQ M
Sbjct: 419 FDVEMILMQQQMMARMAQNAKMGKQGGGMPGMPNMTGMP---NMPGMPKMTPQLM 470
>gi|255722509|ref|XP_002546189.1| signal recognition particle 54 kDa protein [Candida tropicalis
MYA-3404]
gi|240136678|gb|EER36231.1| signal recognition particle 54 kDa protein [Candida tropicalis
MYA-3404]
Length = 555
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/449 (48%), Positives = 302/449 (67%), Gaps = 27/449 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ + + +I ALL++DV KLV +++ NIK +
Sbjct: 1 MVLADLGSRLRGALSSVESGS--DDEI-QQMIKDICGALLESDVNVKLVAKLRGNIKTKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLD-------PGKPSFTPK----------KGK 100
N+ + NKR+ +Q+ IF+ELC ++D P K S T K K
Sbjct: 58 EEGNIVQETSAMNKRKKLQKIIFDELCALVDSHVEPPKPKKLSTTTKTINGKKIRLSKES 117
Query: 101 PSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA P I V
Sbjct: 178 GSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQPTQTIMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHIG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLRIMYEQFQ 338
+ E+F F+S+LLG+GD G ++ + + + D+ + ++ + EG FTL+ Q
Sbjct: 298 DLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIENIKEGKFTLKDFQNQMN 357
Query: 339 NILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND 398
N LKMGP+ + SM+PG S+ L G E E+ KIK + +MDSMT +EL+S + +
Sbjct: 358 NFLKMGPLTNIASMIPGMSNLLSQVGDE-ETSKKIKNMIYIMDSMTTKELESDGRIFIKE 416
Query: 399 -SRIMRIARGSGRQVREVMEMLEEYKRLA 426
SRI+R+ARG+G EV +L++++ ++
Sbjct: 417 PSRIIRVARGAGCAAVEVEMILQQHRMMS 445
>gi|190347110|gb|EDK39324.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 560
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/459 (46%), Positives = 301/459 (65%), Gaps = 32/459 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA+LG + A+ +S+ + E+ + + +I ALL++DV KLV +++ NIK
Sbjct: 15 MVLAELGSRLRDALSGVSSGS---EEEIQAMIKDICTALLESDVNVKLVAKLRDNIKAKV 71
Query: 58 -KIVNLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKPS---------------FTPK 97
K V D+ AA NKR+ +Q+ +F+ELC ++D P KP T
Sbjct: 72 KKEVRNDEAAA--NKRKKLQKIVFDELCALVDSHEEPPKPKKLSQQAKQKSIRGKKITKN 129
Query: 98 KGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKI 157
+ +IMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNATK+ I
Sbjct: 130 NAESHIIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNATKSSI 189
Query: 158 PFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLV 217
P+YGSY E+DPV++A EGV F+KE D+IIVDTSGRHKQE +LF+EM Q+SEA P
Sbjct: 190 PYYGSYLETDPVKVAHEGVVKFRKEKFDIIIVDTSGRHKQEQSLFDEMVQISEAVQPTQT 249
Query: 218 IFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGE 277
I VMD SIGQAA QA+AFK++ G++I+TKMDGHAKGGGA+SAVAAT++P++FIGTGE
Sbjct: 250 IMVMDGSIGQAAESQARAFKETSDFGSIILTKMDGHAKGGGAISAVAATQTPIVFIGTGE 309
Query: 278 HMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP--ELLQKLSEGNFTLRIMYE 335
H+ + E F F+S+LLG+GD ++ + + D + + ++ EG FTLR
Sbjct: 310 HVGDLETFRPSAFISKLLGIGDIQSLIEHVQSLNLQDDESHKKTMENFKEGKFTLRDFQT 369
Query: 336 QFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKL 395
Q N KMG + + SM+PG S +M + E+E+ +KIK + +MDSMT +ELDS
Sbjct: 370 QMNNFTKMGSLANIASMIPGMSG-IMSQIGEEETSSKIKNMIFIMDSMTTKELDSDGRIF 428
Query: 396 MND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMK 433
RI+R+ARG+G EV +L++ + ++ + S K
Sbjct: 429 TEQPERIIRVARGAGCYAIEVEMVLQQQRMMSAMASSAK 467
>gi|448508734|ref|XP_003865992.1| Srp54 signal recognition particle (SRP) subunit [Candida
orthopsilosis Co 90-125]
gi|380350330|emb|CCG20551.1| Srp54 signal recognition particle (SRP) subunit [Candida
orthopsilosis Co 90-125]
Length = 554
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/451 (47%), Positives = 306/451 (67%), Gaps = 27/451 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + D+++ + + +I ALL++D+ KLV +++ NI+ +
Sbjct: 1 MVLADLGERLRGALSSVEKGS--DDEI-QQMIKDICSALLESDINVKLVAKLRGNIRDKI 57
Query: 61 NLDDL---AAGHNKRRIIQQAIFNELCKMLD-------PGKPSFTPK----------KGK 100
+++ + N+R+ +Q+ I++ELC ++D P K S T K K
Sbjct: 58 EEENVLKETSSQNRRKKLQKIIYDELCALVDSHAEPPKPKKLSATTKTINGKKVRVSKES 117
Query: 101 PSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA +P+ I V
Sbjct: 178 GSYLEPDPVKIASEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVHPNQTIMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESSDFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHIG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLRIMYEQFQ 338
+FEVF F+S+LLG+GD ++ + + + D+ + ++ + EG FTL+ Q
Sbjct: 298 DFEVFKPTTFISKLLGIGDIQSLIEHVQSLNLHQDEGHKQTIENIKEGKFTLKDFQNQMN 357
Query: 339 NILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND 398
N +KMGP+ + SM+PG S LM + E+E+ KI+ + +MDSMT +EL+S + +
Sbjct: 358 NFMKMGPLTNIASMIPGMSG-LMSQVGEEETSNKIRNMIFIMDSMTTKELESDGRIFIKE 416
Query: 399 -SRIMRIARGSGRQVREVMEMLEEYKRLAKI 428
SRI+RIARGSG V EV +L++++ ++ +
Sbjct: 417 PSRIVRIARGSGCSVVEVEMILQQHRMMSSM 447
>gi|448081661|ref|XP_004194943.1| Piso0_005471 [Millerozyma farinosa CBS 7064]
gi|359376365|emb|CCE86947.1| Piso0_005471 [Millerozyma farinosa CBS 7064]
Length = 551
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/490 (44%), Positives = 312/490 (63%), Gaps = 31/490 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + DEK + + +I ALL+ DV KLV ++ NIK+ +
Sbjct: 1 MVLADLGSRLRGALSSVESG---DEKEIQNMVKDICSALLETDVNIKLVARLRDNIKEKI 57
Query: 61 --NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKK-------------------- 98
++D G NKR+ +Q+ +F+ELC ++D + PKK
Sbjct: 58 KTQINDNEGGSNKRKKLQKIVFDELCGLVDSHEEPPKPKKLSHKQQTTRGAKGGAKATKV 117
Query: 99 -GKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKI 157
+IM VGLQG+GKTT+ TK A Y++K+G+K LVCADTFRAGAFDQLKQNA K+ I
Sbjct: 118 TSDSHIIMLVGLQGAGKTTSATKLALYYKKRGFKIGLVCADTFRAGAFDQLKQNAIKSGI 177
Query: 158 PFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLV 217
P+YGSY E+DPV++A +GV+ FK+E D+IIVDTSGRHKQE +LF EM Q+S+ P
Sbjct: 178 PYYGSYVETDPVKVAHDGVQKFKQEKFDIIIVDTSGRHKQEQSLFNEMIQISKMIQPTQT 237
Query: 218 IFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGE 277
I VMD SIGQAA QA+AFK+S G++I+TKMDGHAKGGGA+SAVAAT++P++FIGTGE
Sbjct: 238 IMVMDGSIGQAAESQAKAFKESSDFGSIILTKMDGHAKGGGAISAVAATRTPIVFIGTGE 297
Query: 278 HMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP--ELLQKLSEGNFTLRIMYE 335
H+ + EVF FVS+LLG+GD ++ + + D + + ++ EG FTLR
Sbjct: 298 HVGDLEVFKPSSFVSKLLGIGDIQSLIEHVQSLNLQDDESHKKTMENFKEGKFTLRDFQT 357
Query: 336 QFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKL 395
Q N +KMGP+ + SM+PG S+ +M + E+E+ +KIK + +MDSMT +ELDS
Sbjct: 358 QMNNFMKMGPLTNIASMIPGMSN-IMSQVGEEETSSKIKNMIYIMDSMTTKELDSDGRIF 416
Query: 396 MND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNM-NAQ 453
+++ RI+R+ARG+G V EV +L++ + ++ + + K + + + ++R M AQ
Sbjct: 417 IDEPERIVRVARGAGCAVVEVEMVLQQQRLMSSMAASAKTMNAGQGPQAGGMNRMMQQAQ 476
Query: 454 HMSKVLPQGM 463
+ Q M
Sbjct: 477 QNPNFMQQAM 486
>gi|344232045|gb|EGV63924.1| signal recognition particle protein [Candida tenuis ATCC 10573]
Length = 554
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/455 (46%), Positives = 305/455 (67%), Gaps = 26/455 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ +S+ + D+++ L +I+ AL++ DV FKLV ++ NI++ +
Sbjct: 1 MVLADLGNRLKGALSSVSSGS--DDEIA-ALLKDISNALIENDVNFKLVFRLKENIRQKI 57
Query: 61 NLDDLAAG--HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS---------------- 102
+ D + NKR+ +Q+A+++EL ++D + KK S
Sbjct: 58 DTDSFKSDTVANKRKKLQKAVYDELVALVDAYEEPPQIKKLSASSTTAKGKKKLVKKRES 117
Query: 103 -VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG 161
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+YG
Sbjct: 118 HVIMFVGLQGAGKTTSCTKLAVYYKKRGYKVGLVCADTFRAGAFDQLKQNAIKANIPYYG 177
Query: 162 SYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVM 221
SY E+DPV+++ EGV FK E D++IVDTSGRHKQE +LF EM Q+SEA P+ + VM
Sbjct: 178 SYLETDPVKVSAEGVAKFKAERFDIVIVDTSGRHKQEESLFSEMVQISEAILPNQTVMVM 237
Query: 222 DSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDE 281
D SIGQAA +QA+AFK++ G++I+TKMDGHAKGGGA+SA+AATK+P+IFIGTGEH+ +
Sbjct: 238 DGSIGQAAEEQAKAFKEASDFGSIILTKMDGHAKGGGAISAIAATKTPIIFIGTGEHVAD 297
Query: 282 FEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQ--PELLQKLSEGNFTLRIMYEQFQN 339
FE+F F+S+LLG+GD MD + + D + + ++ + EG FT+R Q N
Sbjct: 298 FELFKPSSFISKLLGIGDLQSLMDHVKSLNLQDDENHKKTMEHIKEGKFTVRDFQTQMNN 357
Query: 340 ILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND- 398
+KMGP+ + SM+PG + LM E+E+ AK+K + +MDSMT +ELDS +++
Sbjct: 358 FMKMGPLTNIASMIPGMGN-LMGAVGEEEASAKMKDMIYIMDSMTQQELDSDGLLFIDEP 416
Query: 399 SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMK 433
RI+R+ARG+G V +V +L++ + ++ + K
Sbjct: 417 ERIVRVARGAGCAVIDVEMVLQQQQMMSTMAQTAK 451
>gi|401842173|gb|EJT44430.1| SRP54-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 539
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/481 (44%), Positives = 309/481 (64%), Gaps = 19/481 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNSAISNTQDDFATSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 V----NLDDLAAGHNKRRIIQQAIFNELCKMLDPG---KPSFTPKKGKPSVIMFVGLQGS 112
+ ++ +++IQ+ +F+ELCK++ G + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSENSTTNAQTKKLIQKTVFDELCKLVTCGGNEEKAFLPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE D+IIVDTSGRH+QE LF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHRQEEELFQEMVEISNVIRPNQTIMVLDASIGQAAEQQ 240
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK+S GA+++TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S
Sbjct: 241 SKAFKESSDFGAILLTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFIS 300
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ + M
Sbjct: 301 KLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQM 360
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQ 411
+PG S+ + G E+ SQ K+K+ + ++DSMT EEL+S + +R++R+A+GSG
Sbjct: 361 IPGMSNMMNQVGEEETSQ-KMKKMVYVLDSMTREELESDGRMFVEQPTRMVRVAKGSGTS 419
Query: 412 VREVMEMLEEYKRLAKIWSKMK---------GLKIPKKGEMSALSRNMNAQHMSKVLPQG 462
V EV +L + + +A++ ++P M + N M KV PQ
Sbjct: 420 VFEVEMILMQQQMMARMAQTATQQQPGAPGANARMPGMPNMPGMPGMPNMPGMPKVTPQM 479
Query: 463 M 463
M
Sbjct: 480 M 480
>gi|448086145|ref|XP_004196030.1| Piso0_005471 [Millerozyma farinosa CBS 7064]
gi|359377452|emb|CCE85835.1| Piso0_005471 [Millerozyma farinosa CBS 7064]
Length = 556
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/490 (43%), Positives = 312/490 (63%), Gaps = 31/490 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + DEK + + +I ALL+ DV KLV ++ NIK+ +
Sbjct: 1 MVLADLGSRLRGALSSVESG---DEKEIQNMVKDICSALLETDVNIKLVARLRDNIKEKI 57
Query: 61 --NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKK-------------------- 98
++D G NKR+ +Q+ +F+ELC ++D + PKK
Sbjct: 58 KTQINDNEGGSNKRKKLQKIVFDELCALVDSHEEPPKPKKLSHRQQTTRGAKGGAKATKV 117
Query: 99 -GKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKI 157
+IM VGLQG+GKTT+ TK A Y++K+G+K LVCADTFRAGAFDQLKQNA K+ I
Sbjct: 118 TSDSHIIMLVGLQGAGKTTSATKLALYYKKRGFKIGLVCADTFRAGAFDQLKQNAIKSGI 177
Query: 158 PFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLV 217
P+YGSY E+DPV++A +GV+ FK+E D+IIVDTSGRHKQE +LF EM Q+S+ P
Sbjct: 178 PYYGSYVETDPVKVAHDGVQKFKQEKFDIIIVDTSGRHKQEQSLFNEMIQISKMIQPTQT 237
Query: 218 IFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGE 277
I VMD SIGQAA QA+AFK+S G++I+TKMDGHAKGGGA+SAVAAT++P++FIGTGE
Sbjct: 238 IMVMDGSIGQAAESQAKAFKESSDFGSIILTKMDGHAKGGGAISAVAATRTPIVFIGTGE 297
Query: 278 HMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP--ELLQKLSEGNFTLRIMYE 335
H+ + +VF FVS+LLG+GD ++ + + D + + ++ EG FTLR
Sbjct: 298 HVGDLDVFKPSSFVSKLLGIGDIQSLIEHVQSLNLQDDESHKKTMENFKEGKFTLRDFQT 357
Query: 336 QFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKL 395
Q N +KMGP+ + SM+PG S+ +M + E+E+ +KIK + +MDSMT +ELDS
Sbjct: 358 QMNNFMKMGPLTNIASMIPGMSN-IMSQVGEEETSSKIKNMIYIMDSMTTKELDSDGRIF 416
Query: 396 MND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNM-NAQ 453
+++ RI+R+ARG+G V EV +L++ + ++ + + K + + + ++R M AQ
Sbjct: 417 IDEPERIVRVARGAGCAVVEVEMVLQQQRLMSSMAASAKTMNAGQGPQAPGMNRMMQQAQ 476
Query: 454 HMSKVLPQGM 463
+ Q M
Sbjct: 477 QNPNFMQQAM 486
>gi|354544876|emb|CCE41601.1| hypothetical protein CPAR2_801530 [Candida parapsilosis]
Length = 559
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/451 (47%), Positives = 303/451 (67%), Gaps = 27/451 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + D+++ + + +I ALL++D+ KLV +++ NI+ +
Sbjct: 1 MVLADLGERLRGALSSVEKGS--DDEI-QQMIKDICSALLESDINVKLVAKLRGNIRDKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLD-------PGKPSFTPK----------KGK 100
N+ + N+R+ +Q+ I++ELC ++D P K S T K K
Sbjct: 58 EEGNVLKETSSQNRRKKLQKIIYDELCALVDSHVEPPKPKKLSATTKTINGKKVRVSKES 117
Query: 101 PSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA +P I V
Sbjct: 178 GSYLEPDPVKIAAEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAIHPSQTIMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESSDFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHIG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLRIMYEQFQ 338
+ EVF F+S+LLG+GD ++ + + + D+ + ++ + EG FTL+ Q
Sbjct: 298 DLEVFKPTTFISKLLGIGDIQSLIEHVQSLNLHQDEGHKQTIENIKEGKFTLKDFQNQMN 357
Query: 339 NILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND 398
N +KMGP+ + SM+PG S LM + E+E+ KI+ + +MDSMT +EL+S + +
Sbjct: 358 NFMKMGPLTNIASMIPGMSG-LMSQVGEEETSNKIRNMIFIMDSMTTKELESDGRMFIKE 416
Query: 399 -SRIMRIARGSGRQVREVMEMLEEYKRLAKI 428
SRI+RIARGSG V EV +L++++ ++ +
Sbjct: 417 PSRIVRIARGSGCSVVEVEMILQQHRMMSSM 447
>gi|403417915|emb|CCM04615.1| predicted protein [Fibroporia radiculosa]
Length = 360
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/350 (53%), Positives = 259/350 (74%), Gaps = 7/350 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++DEKVL+ L E+ ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDALLKEVCAALLESDVNVKLVASLRAKVKAKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N++ I+Q+AIF+EL +++DPG + PKKG+P+VIM VGLQG+GKT
Sbjct: 61 KASLEGGADKGKETNRKNIVQKAIFDELVQLVDPGVEPYKPKKGQPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVAIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE D+IIVDTSGRHKQE+ LFEEM Q+ EA P++ + ++D+SIGQAA Q++A
Sbjct: 181 VSKFKKERFDVIIVDTSGRHKQESELFEEMVQIGEAVKPNMTVLILDASIGQAAEAQSRA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+LL
Sbjct: 241 FKDSADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLQDLDKFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKM 343
G+GD G M+ +H++ D+Q E+ +KL EG ++R EQ QN++ M
Sbjct: 301 GLGDVQGLMEHMHDLATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNM 350
>gi|401826054|ref|XP_003887121.1| signal recognition particle GTPase [Encephalitozoon hellem ATCC
50504]
gi|392998279|gb|AFM98140.1| signal recognition particle GTPase [Encephalitozoon hellem ATCC
50504]
Length = 466
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/475 (43%), Positives = 321/475 (67%), Gaps = 20/475 (4%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ +LG SI+ + + N+ D+ + + EI +L+ ++V K V +++ +++ ++
Sbjct: 1 MITELGRSITNTLSNLLNSPTTDQDI-ETAIKEICNSLILSNVNPKYVGDLRNSLRAKLD 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G NK R++Q A++ +L +LDP S+ +KGK +V++FVGLQGSGKTT+ KY
Sbjct: 60 PKEMPPGFNKARMVQNAVYEKLVDLLDPKAESYKVEKGKANVVVFVGLQGSGKTTSICKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++KKG+K +VCADTFRAGAFDQ++QNA K K+PF+GS +E+DPV++A GVE F+K
Sbjct: 120 ANFYKKKGYKVGIVCADTFRAGAFDQVRQNALKIKVPFFGS-SEADPVKVAGAGVERFRK 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E +LI+VDTSGRH QE+ LF EM+ + P+ ++FVMD+ IGQ+A DQA FK +V
Sbjct: 179 EKFELILVDTSGRHTQESELFTEMKDIVREIRPNSIVFVMDAGIGQSAEDQAVGFKNAVD 238
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+DG K GGALS+VAATK P+ F+GTGE M++ EVFD + FVSR+LGMGD
Sbjct: 239 VGSIILTKIDGTNKAGGALSSVAATKCPIEFVGTGEGMEDLEVFDARRFVSRMLGMGDVE 298
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
G M+K+ + +D++ E+++KL +G FTL Y+QFQ IL +GPI ++ M+PGFS +
Sbjct: 299 GLMEKVGS-LGIDEK-EVVKKLRQGKFTLGDFYDQFQKILSLGPISKLLEMMPGFSGLSL 356
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLE 420
P ++ES K+ + + DSM+ ELDS+ + SR+MR+ARGSG V+ V+E+L
Sbjct: 357 P---DEES---FKKLIYVFDSMSRGELDSTGQIFEREPSRVMRVARGSGTSVQGVVEILT 410
Query: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK-------VLPQGMLKQIG 468
++K+ + K+ IP M ++M+ +K +LP+ +L ++G
Sbjct: 411 QFKKAHAVMQKIS--SIPGIESMMGNPKSMSLSQKAKLKEQARNILPKDLLDRMG 463
>gi|323302581|gb|EGA56388.1| Srp54p [Saccharomyces cerevisiae FostersB]
Length = 452
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 297/437 (67%), Gaps = 10/437 (2%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 VNLDDLA----AGHNKRRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ ++ + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE D+IIVDTSGRH QE LF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQ 240
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S
Sbjct: 241 SKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFIS 300
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ + M
Sbjct: 301 KLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQM 360
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQ 411
+PG S+ + G E+ SQ K+K+ + ++DSMT EEL+S + + +R++R+A+GSG
Sbjct: 361 IPGMSNMMNQVGEEETSQ-KMKKMVYVLDSMTKEELESDGRMFIEEPTRMVRVAKGSGTS 419
Query: 412 VREVMEMLEEYKRLAKI 428
V EV +L + + +A++
Sbjct: 420 VFEVEMILMQQQMMARM 436
>gi|149246331|ref|XP_001527635.1| signal recognition particle 54 kDa protein [Lodderomyces
elongisporus NRRL YB-4239]
gi|146447589|gb|EDK41977.1| signal recognition particle 54 kDa protein [Lodderomyces
elongisporus NRRL YB-4239]
Length = 563
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/449 (46%), Positives = 300/449 (66%), Gaps = 27/449 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + E + + +I ALL++D+ KLV +++ NI++ +
Sbjct: 1 MVLADLGERLRGALSSVESGS---EDEIQAMIKDICTALLESDINVKLVAKLRGNIREKI 57
Query: 61 NLDDL---AAGHNKRRIIQQAIFNELCKMLD-------PGKPSFTPK----------KGK 100
L+ + + NKR+ +Q+ IF+ELC ++D P K S T K K
Sbjct: 58 ELEGVLKEQSSQNKRKKLQKIIFDELCALVDSHTEPPKPKKLSSTTKTINGKKVRVSKES 117
Query: 101 PSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV+ FK E D+IIVDTSGRH+QE LF EM Q+ EA P I V
Sbjct: 178 GSYLEPDPVKIAYEGVQKFKHEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQPTQTIMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESADFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHVG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLRIMYEQFQ 338
+ E+F FVS+LLG+GD ++ + + + D+ + ++ + EG FTL+ Q
Sbjct: 298 DLEIFKPTTFVSKLLGIGDIQSLIEHVQSLQLHQDEGHKKTIENIKEGKFTLKDFQTQMN 357
Query: 339 NILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND 398
N +KMGP+ + SM+PG S+ +M + E+E+ KI+ + +MDSMT +EL+S + +
Sbjct: 358 NFMKMGPLTNIASMIPGMSN-IMSQVGEEETSKKIRNMIFIMDSMTTKELESDGRIFIKE 416
Query: 399 -SRIMRIARGSGRQVREVMEMLEEYKRLA 426
SRI+R+A+GSG EV +L++++ ++
Sbjct: 417 PSRIVRVAKGSGCSAVEVEMILQQHRMMS 445
>gi|150866311|ref|XP_001385860.2| Signal recognition particle 54 kDa protein [Scheffersomyces
stipitis CBS 6054]
gi|149387567|gb|ABN67831.2| Signal recognition particle 54 kDa protein [Scheffersomyces
stipitis CBS 6054]
Length = 561
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/448 (46%), Positives = 300/448 (66%), Gaps = 26/448 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + +A+ DE++ N+ + ++ ALL++DV KLV +++ NIK+ V
Sbjct: 1 MVLADLGSRLRGALSSVESAS--DEEI-NQMIKDVCTALLESDVNIKLVVKLRDNIKQKV 57
Query: 61 NLDDLA--AGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS---------------- 102
D + + NKR+ +Q+ I++EL ++D + PKK S
Sbjct: 58 KTDVTSEESAINKRKKLQKIIYDELVGLVDSHEEPPKPKKLSTSTKVINGKKKKVAKTNS 117
Query: 103 -VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG 161
+IMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+YG
Sbjct: 118 HIIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKASIPYYG 177
Query: 162 SYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVM 221
SY E DPV+IA EGV F+ E D+IIVDTSGRH+QE LF+EM Q+ E P I VM
Sbjct: 178 SYLEQDPVKIAYEGVTKFRSEKFDIIIVDTSGRHRQEHQLFQEMVQIGEMIQPTQTIMVM 237
Query: 222 DSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDE 281
D SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+ +
Sbjct: 238 DGSIGQAAESQAKAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHIGD 297
Query: 282 FEVFDVKPFVSRLLGMGDWSGFMDKIH--EVVPMDQQPELLQKLSEGNFTLRIMYEQFQN 339
E+F F+S+LLG+GD ++ + + + + ++ + EG FTL+ Q N
Sbjct: 298 LEIFKPTTFISKLLGIGDIQSLIEHVQGLNLQNDENHKQTMENIKEGKFTLKDFQNQMNN 357
Query: 340 ILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND- 398
LKMGP+ + SM+PG S+ +M + E+E+ KIK + +MDSMT EEL+S ++
Sbjct: 358 FLKMGPLTNIASMIPGLSN-IMSQVGEEETSKKIKNMVYIMDSMTTEELESDGRIFVDQP 416
Query: 399 SRIMRIARGSGRQVREVMEMLEEYKRLA 426
SRI+R+A+GSG E+ +L++++ ++
Sbjct: 417 SRILRVAKGSGCAAVEIEMVLQQHRLMS 444
>gi|6325345|ref|NP_015413.1| Srp54p [Saccharomyces cerevisiae S288c]
gi|1711516|sp|P20424.2|SRP54_YEAST RecName: Full=Signal recognition particle subunit SRP54; AltName:
Full=Signal recognition particle 54 kDa protein homolog
gi|4542|emb|CAA35952.1| signal recognition particle [Saccharomyces cerevisiae]
gi|172705|gb|AAA35092.1| signal recognition particle 54 kDa subunit [Saccharomyces
cerevisiae]
gi|1230693|gb|AAB68136.1| Srp54p: Signal recognition particle 54 kd subunit (Swiss Prot.
accession number P20424) [Saccharomyces cerevisiae]
gi|151942868|gb|EDN61214.1| Signal recognition particle (SRP) subunit [Saccharomyces cerevisiae
YJM789]
gi|256272197|gb|EEU07192.1| Srp54p [Saccharomyces cerevisiae JAY291]
gi|259150240|emb|CAY87043.1| Srp54p [Saccharomyces cerevisiae EC1118]
gi|285815613|tpg|DAA11505.1| TPA: Srp54p [Saccharomyces cerevisiae S288c]
gi|323331335|gb|EGA72753.1| Srp54p [Saccharomyces cerevisiae AWRI796]
gi|323335166|gb|EGA76456.1| Srp54p [Saccharomyces cerevisiae Vin13]
gi|323346316|gb|EGA80606.1| Srp54p [Saccharomyces cerevisiae Lalvin QA23]
gi|323350224|gb|EGA84371.1| Srp54p [Saccharomyces cerevisiae VL3]
gi|349581893|dbj|GAA27050.1| K7_Srp54p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296095|gb|EIW07198.1| Srp54p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|226740|prf||1604366B signal recognition particle 54kD protein
Length = 541
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 297/437 (67%), Gaps = 10/437 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 VNLDDLA----AGHNKRRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ ++ + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE D+IIVDTSGRH QE LF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQ 240
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S
Sbjct: 241 SKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFIS 300
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ + M
Sbjct: 301 KLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQM 360
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQ 411
+PG S+ + G E+ SQ K+K+ + ++DSMT EEL+S + + +R++R+A+GSG
Sbjct: 361 IPGMSNMMNQVGEEETSQ-KMKKMVYVLDSMTKEELESDGRMFIEEPTRMVRVAKGSGTS 419
Query: 412 VREVMEMLEEYKRLAKI 428
V EV +L + + +A++
Sbjct: 420 VFEVEMILMQQQMMARM 436
>gi|207340327|gb|EDZ68711.1| YPR088Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 541
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 297/437 (67%), Gaps = 10/437 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 VNLDDLA----AGHNKRRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ ++ + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE D+IIVDTSGRH QE LF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQ 240
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S
Sbjct: 241 SKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFIS 300
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ + M
Sbjct: 301 KLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQM 360
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQ 411
+PG S+ + G E+ SQ K+K+ + ++DSMT EEL+S + + +R++R+A+GSG
Sbjct: 361 IPGMSNMMNQVGEEETSQ-KMKKMVYVLDSMTKEELESDGRMFIEEPTRMVRVAKGSGTS 419
Query: 412 VREVMEMLEEYKRLAKI 428
V EV +L + + +A++
Sbjct: 420 VFEVEMILMQQQMMARM 436
>gi|323306831|gb|EGA60116.1| Srp54p [Saccharomyces cerevisiae FostersO]
Length = 547
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 297/437 (67%), Gaps = 10/437 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 VNLDDLA----AGHNKRRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ ++ + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE D+IIVDTSGRH QE LF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQ 240
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S
Sbjct: 241 SKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFIS 300
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ + M
Sbjct: 301 KLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQM 360
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQ 411
+PG S+ + G E+ SQ K+K+ + ++DSMT EEL+S + + +R++R+A+GSG
Sbjct: 361 IPGMSNMMNQVGEEETSQ-KMKKMVYVLDSMTKEELESDGRMFIEEPTRMVRVAKGSGTS 419
Query: 412 VREVMEMLEEYKRLAKI 428
V EV +L + + +A++
Sbjct: 420 VFEVEMILMQQQMMARM 436
>gi|449328952|gb|AGE95227.1| signal recognition particle 54kDa subunit [Encephalitozoon
cuniculi]
Length = 466
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/473 (42%), Positives = 312/473 (65%), Gaps = 16/473 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ +LG SI+ + + ++ D+ + + EI +L+ ++V + V +++ ++ ++
Sbjct: 1 MITELGRSITNTLSNLLSSPATDQHI-ETAIREICNSLILSNVNPRYVSDLRDELRAKLD 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+A G NK R++Q A++ L +LDP S+ +KG+ SV++FVGLQGSGKTT+ KY
Sbjct: 60 PGKMAPGFNKARMVQNAVYERLVDLLDPRTESYKIEKGRTSVVVFVGLQGSGKTTSICKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++KKG+K +VCADTFRAGAFDQ++QNA K K+PF+GS +E+DPVR+A GVE F+K
Sbjct: 120 ANFYKKKGYKVGIVCADTFRAGAFDQVRQNALKIKVPFFGS-SEADPVRVASAGVERFRK 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E +LI+VDTSGRH QE LF EM+ + +P ++FVMD+ IGQ+A DQA FK++V
Sbjct: 179 ERFELILVDTSGRHTQETELFTEMKDIIREISPSSIVFVMDAGIGQSAEDQAMGFKRAVD 238
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+DG K GGA+S+VAATK P+ F+GTGE MD+ E FD + FVSR+LGMGD
Sbjct: 239 VGSIILTKIDGTTKAGGAISSVAATKCPIEFVGTGEGMDDLEAFDARRFVSRMLGMGDVE 298
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
G M+K+ + +D++ E+++KL +G FTL Y+QFQ IL +GPI ++ M+PGFS +
Sbjct: 299 GLMEKVGS-LGIDEK-EVVKKLRQGRFTLGDFYDQFQKILSLGPISKLLEMIPGFSGLSL 356
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLE 420
P + K+ + + DS++ ELDS+ + SRIMR+ARGSG V+ V+E+L
Sbjct: 357 P------DEDTFKKLIYVFDSLSRGELDSTGQVFEKEPSRIMRVARGSGTSVQGVVEILT 410
Query: 421 EYKRLAKIWSKMKGLK-----IPKKGEMSALSRNMNAQHMSKVLPQGMLKQIG 468
++K+ + K+ + + MS + + +LP+ +L ++G
Sbjct: 411 QFKKAHAVMQKISSIPGIEGMMGNPSSMSLAQKAKLKEQARNILPKDLLDRMG 463
>gi|4538|emb|CAA34781.1| Srh1p [Saccharomyces cerevisiae]
Length = 541
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 297/437 (67%), Gaps = 10/437 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 VNLDDLA----AGHNKRRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ ++ + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKEGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE D+IIVDTSGRH QE LF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQ 240
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S
Sbjct: 241 SKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFIS 300
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ + M
Sbjct: 301 KLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQM 360
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQ 411
+PG S+ + G E+ SQ K+K+ + ++DSMT EEL+S + + +R++R+A+GSG
Sbjct: 361 IPGMSNMMNQVGEEETSQ-KMKKMVYVLDSMTKEELESDGRMFIEEPTRMVRVAKGSGTS 419
Query: 412 VREVMEMLEEYKRLAKI 428
V EV +L + + +A++
Sbjct: 420 VFEVEMILMQQQMMARM 436
>gi|401623147|gb|EJS41254.1| srp54p [Saccharomyces arboricola H-6]
Length = 543
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 299/437 (68%), Gaps = 10/437 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NIK
Sbjct: 1 MVLADLGKRINSAVNSAISNTQDDFATSVDVMLKGIVTALLESDVNIALVSKLRNNIKSQ 60
Query: 60 V---NLDDLAAGHNK-RRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ N + A + + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKATTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE D+IIVDTSGRH+QE LF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHRQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQ 240
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK S GA+I+TKMDG A+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S
Sbjct: 241 SKAFKDSSDFGAIILTKMDGDARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFIS 300
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ + M
Sbjct: 301 KLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQM 360
Query: 353 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQ 411
+PG S+ + G E+ SQ K+K+ + ++DSMT EEL+S +++ +R++R+A+GSG
Sbjct: 361 IPGMSNMMNQVGEEETSQ-KMKKMVYVLDSMTREELESDGRMFIDEPTRMVRVAKGSGTS 419
Query: 412 VREVMEMLEEYKRLAKI 428
V EV +L + + +A++
Sbjct: 420 VFEVEMILMQQQMMARM 436
>gi|294657854|ref|XP_460149.2| DEHA2E19404p [Debaryomyces hansenii CBS767]
gi|199432996|emb|CAG88422.2| DEHA2E19404p [Debaryomyces hansenii CBS767]
Length = 541
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/456 (44%), Positives = 294/456 (64%), Gaps = 26/456 (5%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIV--NLDDLAAGHNKRRIIQQAIFNELCKMLDP 89
+ +I ALL++DV KLV +++ NIK V ++D + NKR+ +Q+ +F+ELC ++D
Sbjct: 2 IKDICNALLESDVNIKLVAKLRDNIKAKVKTQINDEESSTNKRKKLQKIVFDELCSLVDS 61
Query: 90 GKPSFTPKK--------------------GKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
+ PKK G+ VIMFVGLQG+GKTT+CTK A Y++K+G
Sbjct: 62 HEEPPKPKKLSQQQQKSKTLRGKKATKVTGESHVIMFVGLQGAGKTTSCTKLAVYYKKRG 121
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K LVCADTFRAGAFDQLKQNA K+ IP+YGSY E+DPV++A EGV FK+E D+IIV
Sbjct: 122 YKVGLVCADTFRAGAFDQLKQNAIKSSIPYYGSYIETDPVKVAYEGVVKFKQEKFDIIIV 181
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LF EM Q+SE P I VMD SIGQAA QA+AFK+S G++I+TK
Sbjct: 182 DTSGRHKQEQSLFNEMIQISEMIVPTQTIMVMDGSIGQAAESQAKAFKESSQFGSIILTK 241
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
MDGHA+GGGA+SAVA TK+P++FIGTGEH + E+F F+S+LLG+GD ++ +
Sbjct: 242 MDGHARGGGAISAVATTKTPIVFIGTGEHATDLEIFKPTSFISKLLGIGDIQSLIEHVQS 301
Query: 310 VVPMDQQP--ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREK 367
+ D + + ++ EG FTLR Q N +KMGP+ + SM+PG S+ +M + E+
Sbjct: 302 LNLQDDESHKKTIENFKEGKFTLRDFQTQMNNFMKMGPLTNIASMIPGMSN-IMSQVGEE 360
Query: 368 ESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLA 426
E+ +KIK + +MDSMT +ELDS RI+R+ARG+G EV +L++ + ++
Sbjct: 361 ETSSKIKNMIYIMDSMTTKELDSDGRIFTQQPERIIRVARGAGCSAVEVEMVLQQQRMMS 420
Query: 427 KIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQG 462
+ K + P+ + + +M++++ Q
Sbjct: 421 AMAVNAKNMGGPQSAPGAPGAPGAGGNNMARMMQQA 456
>gi|19074175|ref|NP_584781.1| SIGNAL RECOGNITION PARTICLE 54kDa SUBUNIT (SRP54) [Encephalitozoon
cuniculi GB-M1]
gi|19068817|emb|CAD25285.1| SIGNAL RECOGNITION PARTICLE 54kDa SUBUNIT (SRP54) [Encephalitozoon
cuniculi GB-M1]
Length = 466
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/473 (42%), Positives = 312/473 (65%), Gaps = 16/473 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ +LG SI+ + + ++ D+ + + EI +L+ ++V + V +++ ++ ++
Sbjct: 1 MITELGRSITNTLSNLLSSPATDQHI-ETAIREICNSLILSNVNPRYVSDLRDELRAKLD 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+A G NK R++Q A++ L +LDP S+ +KG+ SV++FVGLQGSGKTT+ KY
Sbjct: 60 PGKMAPGFNKARMVQNAVYERLVDLLDPRTESYKIEKGRTSVVVFVGLQGSGKTTSICKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++KKG+K +VCADTFRAGAFDQ++QNA K K+PF+GS +E+DPV++A GVE F+K
Sbjct: 120 ANFYKKKGYKVGIVCADTFRAGAFDQVRQNALKIKVPFFGS-SEADPVKVASAGVERFRK 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E +LI+VDTSGRH QE LF EM+ + +P ++FVMD+ IGQ+A DQA FK++V
Sbjct: 179 ERFELILVDTSGRHTQETELFTEMKDIIREISPSSIVFVMDAGIGQSAEDQAMGFKRAVD 238
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+DG K GGA+S+VAATK P+ F+GTGE MD+ E FD + FVSR+LGMGD
Sbjct: 239 VGSIILTKIDGTTKAGGAISSVAATKCPIEFVGTGEGMDDLEAFDARRFVSRMLGMGDVE 298
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
G M+K+ + +D++ E+++KL +G FTL Y+QFQ IL +GPI ++ M+PGFS +
Sbjct: 299 GLMEKVGS-LGIDEK-EVVKKLRQGRFTLGDFYDQFQKILSLGPISKLLEMIPGFSGLSL 356
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLE 420
P + K+ + + DS++ ELDS+ + SRIMR+ARGSG V+ V+E+L
Sbjct: 357 P------DEDTFKKLIYVFDSLSRGELDSTGQVFEKEPSRIMRVARGSGTSVQGVVEILT 410
Query: 421 EYKRLAKIWSKMKGLK-----IPKKGEMSALSRNMNAQHMSKVLPQGMLKQIG 468
++K+ + K+ + + MS + + +LP+ +L ++G
Sbjct: 411 QFKKAHAVMQKISSIPGIEGMMGNPSSMSLAQKAKLKEQARNILPKDLLDRMG 463
>gi|344304252|gb|EGW34501.1| hypothetical protein SPAPADRAFT_134434 [Spathaspora passalidarum
NRRL Y-27907]
Length = 559
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/449 (46%), Positives = 301/449 (67%), Gaps = 27/449 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ + + +I ALL++DV KLV +++ NI+ +
Sbjct: 1 MVLADLGARLRGALSSVESGS--DDEI-QQMIKDICGALLESDVNIKLVAKLRDNIRSQI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKP-----SFTPKKGK-------- 100
N+ A+ NKR+ +Q+ I++ELC ++D P KP S KGK
Sbjct: 58 ASSNIAQEASPMNKRKKLQKVIYDELCGLVDSHVEPPKPKKINASTKTIKGKKVKLSKES 117
Query: 101 PSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+ LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFTVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV FK+E D+IIVDTSGRH+QE LF EM Q+ +A P I V
Sbjct: 178 GSYLEPDPVKIAFEGVSKFKQEKFDIIIVDTSGRHRQEQQLFTEMVQIGDAIQPTQTIMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHIG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQ--PELLQKLSEGNFTLRIMYEQFQ 338
+ EVF F+S+LLG+GD ++ + + + + + ++ + EG FTL+ Q
Sbjct: 298 DLEVFKPTTFISKLLGIGDIQSLIEHVQSLNLQNDEGHKQTIENIKEGKFTLKDFQTQMN 357
Query: 339 NILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND 398
N LKMGP+ + SM+PG + +M + E+E+ KIK + +MDSMT +EL+S ++
Sbjct: 358 NFLKMGPLTNIASMIPGLGN-IMSQVGEEETSKKIKNMIYIMDSMTQKELESDGRIFIDQ 416
Query: 399 -SRIMRIARGSGRQVREVMEMLEEYKRLA 426
SRI+R+A+GSG EV +L++++ ++
Sbjct: 417 PSRIIRLAKGSGCSAIEVEMILQQHRMMS 445
>gi|344245396|gb|EGW01500.1| Signal recognition particle 54 kDa protein [Cricetulus griseus]
Length = 272
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/266 (68%), Positives = 225/266 (84%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
L E+ ALL+ADV KLV++++ N+K ++L+++A+G NKR++IQ A+F EL K++DPG
Sbjct: 2 LKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGV 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
++TP KGK +VIMFVGLQGSGKTTTC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQN
Sbjct: 62 KAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKA+IPFYGSYTE DPV IA EGV+ FK EN ++IIVDTSGRHKQE +LFEEM QVS A
Sbjct: 122 ATKARIPFYGSYTEMDPVIIASEGVDKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNA 181
Query: 212 TNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVI 271
PD +++VMD+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+I
Sbjct: 182 IQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPII 241
Query: 272 FIGTGEHMDEFEVFDVKPFVSRLLGM 297
FIGTGEH+D+FE F +PF+S+LLGM
Sbjct: 242 FIGTGEHIDDFEPFKTQPFISKLLGM 267
>gi|146416143|ref|XP_001484041.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 560
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/451 (47%), Positives = 296/451 (65%), Gaps = 33/451 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA+LG + A+ +S+ + E+ + + +I ALL++DV KLV +++ NIK
Sbjct: 15 MVLAELGSRLRDALSGVSSGS---EEEIQAMIKDICTALLESDVNVKLVAKLRDNIKAKV 71
Query: 58 -KIVNLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKPS---------------FTPK 97
K V D+ AA NKR+ +Q+ +F+ELC ++D P KP T
Sbjct: 72 KKEVRNDEAAA--NKRKKLQKIVFDELCALVDSHEEPPKPKKLSQQAKQKSIRGKKITKN 129
Query: 98 KGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKI 157
+ +IMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNATK+ I
Sbjct: 130 NAESHIIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNATKSLI 189
Query: 158 PFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLV 217
P+YGSY E+DPV++A EGV F+KE D+IIVDTSGRHKQE +LF+EM Q+SEA P
Sbjct: 190 PYYGSYLETDPVKVAHEGVVKFRKEKFDIIIVDTSGRHKQEQSLFDEMVQISEAVQPTQT 249
Query: 218 IFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGE 277
I VMD SIGQAA QA+AFK++ G++I+TKMDGHAKGGGA+SAVAAT++P++FIGTGE
Sbjct: 250 IMVMDGSIGQAAELQARAFKETSDFGSIILTKMDGHAKGGGAISAVAATQTPIVFIGTGE 309
Query: 278 HMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP--ELLQKLSEGNFTLRIMYE 335
H+ + E F F+S+LLG+GD ++ + + D + + ++ EG FTLR
Sbjct: 310 HVGDLETFRPSAFISKLLGIGDIQSLIEHVQLLNLQDDESHKKTMENFKEGKFTLRDFQT 369
Query: 336 QFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKL 395
Q N KMG + + M+PG S +M + E+E+ +KIK + +MD MT +ELDS
Sbjct: 370 QMNNFTKMGSLANIALMIPGMSG-IMSQIGEEETSSKIKNMIFIMDLMTTKELDSDGRIF 428
Query: 396 MND-SRIMRIARGSGRQVREVMEMLEEYKRL 425
RI+R+ARG+G EV EM+ + +R+
Sbjct: 429 TEQPERIIRVARGAGCYAIEV-EMVLQQQRM 458
>gi|365762561|gb|EHN04095.1| Srp54p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 510
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/405 (47%), Positives = 282/405 (69%), Gaps = 9/405 (2%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLA----AGHNKRRIIQQAIFNELCKML 87
L I ALL++DV LV +++ NI+ + ++ + +++IQ+ +F+ELCK++
Sbjct: 2 LKGIVTALLESDVNIALVSKLRNNIRSQLLSENRSEKSTTNAQTKKLIQKTVFDELCKLV 61
Query: 88 D---PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGA 144
+ +F PKK K ++IMFVGLQGSGKTT+CTK A Y+ K+G+K LVCADTFRAGA
Sbjct: 62 TCEGSEEKAFVPKKRKTNIIMFVGLQGSGKTTSCTKLAVYYSKRGFKVGLVCADTFRAGA 121
Query: 145 FDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEE 204
FDQLKQNA +A+IPFYGSYTE+DP ++A EG+ FKKE D+IIVDTSGRH QE LF+E
Sbjct: 122 FDQLKQNAIRARIPFYGSYTETDPAKVAEEGINKFKKEKFDIIIVDTSGRHHQEEELFQE 181
Query: 205 MRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVA 264
M ++S P+ I V+D+SIGQAA Q++AFK+S GA+I+TKMDGHA+GGGA+SAVA
Sbjct: 182 MIEISNVIKPNQTIMVLDASIGQAAEQQSKAFKESSDFGAIILTKMDGHARGGGAISAVA 241
Query: 265 ATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLS 324
AT +P+IFIGTGEH+ + E F K F+S+LLG+GD +++ V + ++ +
Sbjct: 242 ATNTPIIFIGTGEHIHDLEKFSPKSFISKLLGIGDIESLFEQLQTVSNKEDAKATMENIQ 301
Query: 325 EGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMT 384
+G FTL +Q Q I+KMGP+ + M+PG S+ + G E+ SQ K+K+ + ++DSMT
Sbjct: 302 KGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGMSNMMNQVGEEETSQ-KMKKMVYVLDSMT 360
Query: 385 NEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKI 428
EEL+S + + +R++R+A+GSG V EV +L + + +A++
Sbjct: 361 KEELESDGRMFIEEPTRMVRVAKGSGTSVFEVEMILMQQQMMARM 405
>gi|303389022|ref|XP_003072744.1| signal recognition particle protein Srp54 [Encephalitozoon
intestinalis ATCC 50506]
gi|303301886|gb|ADM11384.1| signal recognition particle protein Srp54 [Encephalitozoon
intestinalis ATCC 50506]
Length = 466
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/474 (42%), Positives = 317/474 (66%), Gaps = 20/474 (4%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ +LG SI+ + + + D+ + + EI +L+ ++V + V ++ +K ++
Sbjct: 1 MITELGKSITNTLSNLLRSRATDQDI-EAAIKEICHSLILSNVNPRYVSNLRNELKARLD 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+A G NK R++Q A++ +L +LDP + +KGK S+I+FVGLQGSGKTT+ KY
Sbjct: 60 PSGMAPGLNKARVVQNAVYEKLVDLLDPKAKGYKIEKGKTSIIVFVGLQGSGKTTSICKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++KKG+K +VCADTFRAGAFDQ++QNA K K+PF+GS +E+DPV++A GVE F++
Sbjct: 120 ANFYKKKGFKVGIVCADTFRAGAFDQVRQNALKIKVPFFGS-SEADPVKVAGAGVERFRR 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E ++I+VDTSGRH QE+ LF EM+ + PD ++FVMD+ IGQ+A DQA FK++V+
Sbjct: 179 ERFEVILVDTSGRHTQESELFVEMKDIMREVRPDSIVFVMDAGIGQSAEDQAIGFKKAVN 238
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+DG K GGA+S+VAAT P+ F+G GE M++ EVFD + FVSR+LGMGD
Sbjct: 239 VGSIILTKIDGTNKAGGAISSVAATGCPIEFVGNGEGMEDLEVFDARRFVSRMLGMGDVE 298
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
G M+K+ E + +D++ E+++KL +G FTL Y+QFQ IL +GPI ++ M+PGFS +
Sbjct: 299 GLMEKV-ESLGIDEK-EVVRKLKQGKFTLGDFYDQFQKILSLGPISKLLEMMPGFSGLSL 356
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLE 420
P ++ES K+ + + DS++ ELDS+ + SRIMR+ARGSG V+ V+E+L
Sbjct: 357 P---DEES---FKKLIYIFDSLSRGELDSTGQMFEKEPSRIMRVARGSGTSVQGVVEILT 410
Query: 421 EYKRLAKIWSKMKGLKIPK----KGEMSALSRNMNA---QHMSKVLPQGMLKQI 467
++K+ + K+ IP G S++S A + +LP+ +L ++
Sbjct: 411 QFKKAHAVMQKIS--SIPGIESMMGNPSSMSLTQKAKLKEQAKNILPKDLLDKM 462
>gi|225683542|gb|EEH21826.1| signal recognition particle 54 kDa protein [Paracoccidioides
brasiliensis Pb03]
Length = 500
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/408 (50%), Positives = 282/408 (69%), Gaps = 5/408 (1%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
+ EI ALL ADV +LV+ ++ +IK V L NK+R+IQ+ +F++L ++DP
Sbjct: 2 IKEICAALLSADVNVRLVQSLRKSIKSSVQFSSLPPAVNKKRLIQKTVFDQLVALVDPHC 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F PKKG+ +VIMFVGLQG+GKTTTCTK A ++Q +G++ ALVCADTFRAGAFDQLKQN
Sbjct: 62 EPFKPKKGRSNVIMFVGLQGAGKTTTCTKLARHYQTRGFRAALVCADTFRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS T++DPV +A EGV FKKE D+IIVDTSGRHKQEA LF EM Q+ A
Sbjct: 122 ATKAKIPYYGSLTQTDPVVVAAEGVAKFKKERFDIIIVDTSGRHKQEADLFAEMTQIQTA 181
Query: 212 TNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVI 271
PD I V+D +IGQAA Q+ AFK + GA+I+TK DG A GGGA+SAVAAT +P+I
Sbjct: 182 IKPDQTILVLDGTIGQAAEIQSSAFKATADFGAIIITKTDGAAAGGGAISAVAATHTPII 241
Query: 272 FIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTL 330
F+GTGEHM + E F KPF+ +LLGMGD +G ++ + V E + ++ G FTL
Sbjct: 242 FLGTGEHMLDLERFAPKPFIQKLLGMGDMAGLVEHVQAVTKDSATAKETYKHITAGIFTL 301
Query: 331 RIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA-KIKRYMTMMDSMTNEELD 389
R E +I+KMGP+ ++ SM+PG S+ + G + E + K++R + + DSMT ELD
Sbjct: 302 RDFRENITSIMKMGPLSKISSMIPGLSN--ITSGLDDEDGSLKLRRMIYIFDSMTAAELD 359
Query: 390 SSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK 436
++ SRI+R+A GSG VREV ++L ++K +A + ++ G K
Sbjct: 360 GDGKVFIDQPSRIVRVACGSGTTVREVEDLLSQHKMMAGMAKRVGGQK 407
>gi|57641421|ref|YP_183899.1| signal recognition particle protein Srp54 [Thermococcus
kodakarensis KOD1]
gi|73919452|sp|Q5JJC8.1|SRP54_PYRKO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|57159745|dbj|BAD85675.1| signal recognition particle, SRP54 subunit [Thermococcus
kodakarensis KOD1]
Length = 448
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/441 (46%), Positives = 295/441 (66%), Gaps = 7/441 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ ++ +DE + E + +I RALLQADV KLV ++ I+K
Sbjct: 1 MALEKLGQALNSALKKLARSSTVDEATIKEIVRDIQRALLQADVNVKLVLQLTKQIQKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ AG +K+ I + ++ EL K L KP K KP+VI+ VG+QGSGKTT+
Sbjct: 61 LEEEPPAGVSKKEHIIKIVYEELTKFLGTEAKP--LEIKHKPTVILTVGIQGSGKTTSVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QL+Q I +G E D V++A EGVE F
Sbjct: 119 KLARYLQKRGYKVGVVCSDTWRPGAYYQLRQLLDPFGIEVFGDPEEKDAVKLAREGVEHF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+++ D+IIVD++GRHK+E L EEMRQ+SEA P VI V+D +IGQ A++QA AFK++
Sbjct: 179 REKGVDVIIVDSAGRHKEEKGLIEEMRQISEAIKPHEVILVIDGTIGQQAYNQAMAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIGTGE +D+ E FD K FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGERIDDLEPFDPKRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
G ++KI E+ + + E ++K G F L+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 299 IQGLLEKIEELQKEQEFREEDMEKFLRGKFNLKDMYAQLEAMQKMGPLKQILQMIPGLGY 358
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
L P+ + + K+KRY +MDSMT EEL+ NP+++N SRI RIARGSG EV E+
Sbjct: 359 SL-PEDAVRVGEEKLKRYKVIMDSMTEEELE--NPEIINYSRIKRIARGSGATTAEVREL 415
Query: 419 LEEYKRLAKIWSKMKGLKIPK 439
L +Y ++ K++ + K+ K
Sbjct: 416 LNQYNQMKKMFKSLNKRKLAK 436
>gi|290979105|ref|XP_002672275.1| predicted protein [Naegleria gruberi]
gi|284085850|gb|EFC39531.1| predicted protein [Naegleria gruberi]
Length = 484
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/479 (43%), Positives = 319/479 (66%), Gaps = 14/479 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M+L++L +S A+ + + +++D+K +N+ L EI++ALL+ADV + V ++ IK+
Sbjct: 1 MILSELSSQLSNALLTIHSQSVMDDKSVNKFLKEISKALLEADVNCEQVVQVYNGIKE-- 58
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
LD+++ N+++ I++ + ELCK+ DPG + P KGK +VI+F+GL+G+GKTTT +K
Sbjct: 59 ELDNMSQDVNRKKNIKRILKKELCKLFDPGVKAIKPVKGKQNVILFIGLRGAGKTTTASK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A +++KKG+K A+V ++TFR GAFD L+ N+ + IPFYG+ E+DP++IA +GVETFK
Sbjct: 119 FAMFYKKKGFKCAIVNSNTFRTGAFDSLRHNSLRDTIPFYGNVFETDPIKIAKDGVETFK 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN DLIIVDTS R QE +LFEEM+ +SEA P+ +I VMDS IGQ+ +Q FK +
Sbjct: 179 KENYDLIIVDTSARTIQEESLFEEMKLISEAITPNDIILVMDSKIGQSIKEQVTTFKSRI 238
Query: 241 -SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
++G++I+TK+DGH+KGGGALSA+AATK+P+ FIGTGE+ D + F+V+ FVSRLLG G+
Sbjct: 239 PTLGSIILTKLDGHSKGGGALSAIAATKTPISFIGTGEYYDSLQPFEVEGFVSRLLGEGN 298
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLS-EGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
++ + + + L L G FT+R + EQ +I+ MGP +V SM+ GFS
Sbjct: 299 YTILFGAVPQASDSTEISVLNSSLPINGVFTMRDLKEQLLSIVNMGPPSRVLSMIFGFSE 358
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND--SRIMRIARGSGRQVREVM 416
+G+E K+K+Y+T+M SM ELD ++ ++D SRI+RIARGSG+ ++V+
Sbjct: 359 FPKIEGQE----YKVKKYLTIMGSMNETELDCADFTKLSDMQSRILRIARGSGKNSKDVV 414
Query: 417 EMLEEYKRLAKI-WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQ 474
E+L+ YK+ + K K + RN +H+ G+++Q+G GL
Sbjct: 415 ELLDNYKQFQSTNHPNIIRKKSSKIQDAFNTFRNNELEHLDW---NGIMRQMGTNSGLN 470
>gi|396081243|gb|AFN82861.1| signal recognition particle protein Srp54 [Encephalitozoon romaleae
SJ-2008]
Length = 466
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/472 (41%), Positives = 319/472 (67%), Gaps = 16/472 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ +LG SI+ + + ++ D+ + + + EI +L+ ++V K V +++ +++ ++
Sbjct: 1 MITELGRSITNTLSNLLSSHTTDQDI-DTAIKEICNSLILSNVNPKYVNDLKNSLRAELD 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G NK +++Q A++ L +LDP + +KGK +V++FVGLQGSGKTT+ KY
Sbjct: 60 PKGMPPGFNKAKMVQNAVYERLVDLLDPKTEGYKIEKGKTNVVVFVGLQGSGKTTSICKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++KKG+K +VCADTFRAGAFDQ+KQNA K K+PF+GS +E DPV++A GVE F+K
Sbjct: 120 ANFYKKKGYKVGIVCADTFRAGAFDQVKQNALKIKVPFFGS-SEVDPVKVAGAGVERFRK 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E +LI+VDTSGRH QE+ LF EM+ + P+ ++FVMD+ IGQ+A DQA FK++V
Sbjct: 179 EKFELILVDTSGRHTQESELFLEMKDIIREVGPNSIVFVMDAGIGQSAEDQAVGFKRAVD 238
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++++TK+DG +K GGALS+VAATK P+ F+GTGE M++ E+FD + FVSR+LGMGD
Sbjct: 239 VGSILLTKIDGTSKAGGALSSVAATKCPIEFVGTGEGMEDLEMFDARRFVSRMLGMGDVE 298
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
G M+K+ + +D++ E+++KL +G FTL Y+QFQ IL +GPI ++ M+PGFS +
Sbjct: 299 GLMEKVGS-LGIDEK-EVVKKLKQGRFTLGDFYDQFQKILSLGPISKLLEMIPGFSGLSL 356
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLE 420
P ++ES K+ + + DSM+ ELDS+ + +R++R+ARGSG V+ V E+L
Sbjct: 357 P---DEES---FKKLIYVFDSMSRGELDSTGQIFEREPTRVVRVARGSGTSVQGVTEILS 410
Query: 421 EYKRLAKIWSKMKGLKIPKK--GEMSALSRNMNA---QHMSKVLPQGMLKQI 467
++K++ + K + + G S++S + A + +LP+ +L ++
Sbjct: 411 QFKKVHAMMQKFSSIPGIENMMGNPSSISLSQKAKLKEQAKNILPKDLLDRM 462
>gi|409095092|ref|ZP_11215116.1| signal recognition particle protein Srp54 [Thermococcus zilligii
AN1]
Length = 449
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/474 (43%), Positives = 302/474 (63%), Gaps = 28/474 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ A IDE ++ E + +I RAL+Q+DV +LV ++ I++
Sbjct: 1 MALERLGKALNSALRKLARAGTIDEALIKEVVRDIQRALIQSDVNVRLVLQLTRRIEERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG + R + + ++ EL +L KK KP+V++ VG+QGSGKTTT K
Sbjct: 61 LKEKPPAGMSPREHVIRIVYEELTDLLGKEAVPLEIKK-KPTVLLTVGIQGSGKTTTIAK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QK+G++ LVC DT+R GA+ QLKQ I +G+ E D +++A EGVE FK
Sbjct: 120 LARYLQKRGYRVGLVCTDTWRPGAYSQLKQLVEPLGIGVFGNPEEKDAIKLAREGVEYFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+IIVDT+GRHK+EA L EEM+Q+S A PD VI V+D +IGQ A++QA AFK++
Sbjct: 180 DKGVDVIIVDTAGRHKEEAGLIEEMKQISSAIQPDEVILVIDGTIGQQAYNQALAFKEAT 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++IVTK+DG AKGGGALSAVAAT +P+ FIGTGE +D+ E FD K FVSRLLG+GD
Sbjct: 240 PIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDLEPFDPKRFVSRLLGLGDI 299
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K E+ + + E L+K +G F L+ MY Q + + KMGP+ +V M+PG
Sbjct: 300 ESLLEKFEELTQEQEIREEDLEKFLKGKFNLKDMYAQLEAMQKMGPLQKVLQMIPGLGYS 359
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
L P + + K+KRY +MDSMT EEL+ NP ++N SRI RIARGSG +EV E+L
Sbjct: 360 L-PDEAIRVGEEKLKRYRVIMDSMTEEELE--NPDIINYSRIKRIARGSGTSTKEVKELL 416
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGL 473
+Y ++ K++ +N++ + ++K M K GG+GGL
Sbjct: 417 AQYNQMRKMF------------------KNLDKRKLAK-----MAKNFGGLGGL 447
>gi|123420898|ref|XP_001305857.1| SRP54-type protein [Trichomonas vaginalis G3]
gi|121887399|gb|EAX92927.1| SRP54-type protein, putative [Trichomonas vaginalis G3]
Length = 490
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/488 (41%), Positives = 319/488 (65%), Gaps = 15/488 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG + +I+++S + IDE V + EI+++L+ ADV ++V +++ +N
Sbjct: 1 MLQDLGDKLIGSIKKLSESKKIDETVYRNFMIEISKSLIAADVSKEIVFSFSKRLREKIN 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+++ G + +R+I++A+FNEL +++PG ++ P K K ++ M VGLQG+GKTTT TK
Sbjct: 61 FNEIPPGLSAKRVIEKAVFNELVTLINPGMTAYKPIKKKLNIFMMVGLQGAGKTTTVTKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y++++ WK ++ ADTFRAGA +QL QNA A+IP++ +TESDPV++A++G++ FKK
Sbjct: 121 ANYYKRRNWKTGVIAADTFRAGAREQLMQNAQTARIPYFVDFTESDPVQVALKGIDKFKK 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E ++ I+DTSGRH QE ALF EM+ ++E PD +IFVMD +IGQAA+DQA FK +V
Sbjct: 181 EKFEIAIIDTSGRHMQEEALFAEMKSLAENVVPDEIIFVMDGTIGQAAYDQALGFKNAVG 240
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+D +AKGGGALSAVAAT+SP+ FIG+GE+ + E FD FVSRLLG+ D +
Sbjct: 241 VGSIIITKLDSNAKGGGALSAVAATQSPISFIGSGENFTDLEWFDPSSFVSRLLGIADPT 300
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIG---QVFSMLPGFSS 358
F + E + D+ E+ Q + G F + +Y Q+Q IL++G + S+ G++
Sbjct: 301 IFQRTLEE-IDKDRNREIGQHILAGQFNFKDLYAQYQTILEVGNFNSMMESISIANGYAP 359
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM-NDSRIMRIARGSGRQVREVME 417
KG + ++ +++R + +D+M+ EL+ NP L +DSR MR+A GSG V
Sbjct: 360 G--TKGNPEATKEQVRRILITIDAMSTSELE--NPSLFKDDSRKMRVASGSGMPPTFVQY 415
Query: 418 MLEEYKRLAKIWSKM--KGLKIPKKGEMSALS--RNMNAQ--HMSKVLPQGMLKQIGGVG 471
+++E KR K++ +M K L + + EM + R Q M+K + + ML+ +GG+
Sbjct: 416 VIDEQKRWEKMFKRMDKKTLALMAQEEMPTFANERQFKEQVLKMAKSMDKDMLRSVGGIE 475
Query: 472 GLQNLMKQ 479
GL+ M+Q
Sbjct: 476 GLEASMRQ 483
>gi|333911098|ref|YP_004484831.1| Signal recognition 54 kDa protein [Methanotorris igneus Kol 5]
gi|333751687|gb|AEF96766.1| Signal recognition 54 kDa protein [Methanotorris igneus Kol 5]
Length = 451
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/444 (46%), Positives = 294/444 (66%), Gaps = 12/444 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG SI++A+ ++ NAT +D+K++ E + +I +AL+QADV KLV +M I+K
Sbjct: 1 MLEKLGESINKALNKIKNATFVDKKLVKEVIKDIQKALIQADVNVKLVLQMSKTIEKRAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + ++ EL K+L +P PKK +VI+ VG+QGSGKTTT
Sbjct: 61 EETPPKGFSKKEHIIKIVYEELVKLLGEEPKPLELNPKK--QTVILLVGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + P+ IA EG+E
Sbjct: 119 KLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPLYGDETRTKSPIDIAKEGLEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FKK D+II+DT+GRHK+E L EEM+ + E TNPD +I V+D ++GQ A +QA+AFK
Sbjct: 179 FKK--ADVIIIDTAGRHKEEKGLLEEMKMMKEITNPDEIILVIDGTLGQQARNQAKAFKD 236
Query: 239 SV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V +G++IVTK+DG AKGGGALSAVA K+P+ FIGTGE +D+ E FD K F+SRLLGM
Sbjct: 237 AVGDIGSIIVTKLDGSAKGGGALSAVAEIKAPIKFIGTGEGIDDLEPFDPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
GD ++K E+V ++ E + + G FTL +Y Q + I KMGPI Q+ +M+PGF
Sbjct: 297 GDLDSLLEKADELVD-EKTEESIDAILRGKFTLNELYAQLEAINKMGPIKQIMNMIPGFG 355
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
+ L PK + ++ K+K+Y +MDSMT EE NP+++ SRI RIARG+G + EV E
Sbjct: 356 AGL-PKEVVQITEQKLKKYRIIMDSMTKEE--KENPEIIKASRIERIARGAGVKPEEVKE 412
Query: 418 MLEEYKRLAKIWSKMKGLKIPKKG 441
+L Y + +K K+ K G
Sbjct: 413 LLRYYATTKRAIENLKRGKMLKMG 436
>gi|374635569|ref|ZP_09707165.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Methanotorris formicicus Mc-S-70]
gi|373561871|gb|EHP88096.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Methanotorris formicicus Mc-S-70]
Length = 451
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/444 (46%), Positives = 292/444 (65%), Gaps = 12/444 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG SI++A+ ++ NA +D+K++ E + +I +AL+QADV KLV +M I+K
Sbjct: 1 MLEKLGESINKALNKIKNAAFVDKKLIKEVIKDIQKALIQADVNVKLVLQMSKTIEKRAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + ++ EL K+L + K PKK +VI+ VG+QGSGKTTT
Sbjct: 61 EETPPKGFSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QTVILLVGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + PV IA EG+E
Sbjct: 119 KLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPLYGDETRTKSPVDIAKEGLEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FKK D++I+DT+GRHK+E L EEM+ + E TNPD +I V+D ++GQ A +QA+AFK
Sbjct: 179 FKK--VDVLIIDTAGRHKEEKGLLEEMKMMKEITNPDEIILVIDGTLGQQARNQAKAFKD 236
Query: 239 SV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V +G++IVTK+DG AKGGGALSAVA +P+ FIGTGE +D+ EVFD K F+SRLLGM
Sbjct: 237 AVGDIGSIIVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGIDDLEVFDPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
GD ++K E+V ++ E + + G FTL +Y Q + I KMGPI Q+ SM+PG
Sbjct: 297 GDLDTLLEKADELVD-EKTEESIDAILRGKFTLNELYAQLEAINKMGPIKQIMSMIPGLG 355
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
L PK + ++ K+K+Y +MDSMT EE NP+++ SRI RIARG+G + EV E
Sbjct: 356 GGL-PKEAAQVTEQKLKKYRIIMDSMTKEE--KENPEIIKASRIQRIARGAGVKQEEVKE 412
Query: 418 MLEEYKRLAKIWSKMKGLKIPKKG 441
+L+ Y K +K K+ K G
Sbjct: 413 LLKYYATTKKAVENLKRGKMLKMG 436
>gi|389852998|ref|YP_006355232.1| signal recognition particle protein Srp54 [Pyrococcus sp. ST04]
gi|388250304|gb|AFK23157.1| signal recognition particle protein Srp54 [Pyrococcus sp. ST04]
Length = 443
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/438 (45%), Positives = 291/438 (66%), Gaps = 15/438 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++S A+++++ A +DE ++ E + +I RAL+QADV +LV ++ I++
Sbjct: 1 MVLDTLGKALSNALKKIARAGSVDEALIKEVVRDIQRALIQADVNVRLVLKLTKEIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +++ I + ++ EL K+L +P + KP++++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISRKEHIIKIVYEELTKLLGTEARP--IEIRAKPTILLMVGIQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QLKQ I +G E D +++A EGVE F
Sbjct: 119 KLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPKEKDAIKLAKEGVEHF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + DLIIVDT+GRHK+E L EEMRQ+SEA NP VI V+D +IGQ A++QA AFK++
Sbjct: 179 KSKGVDLIIVDTAGRHKEEKDLIEEMRQISEAINPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPARFVSRLLGLGD 298
Query: 300 WSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS- 357
G ++K EV ++ E +++ +G FTL+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 299 IQGLLEKFKEVEKEIELSEEDVERFLKGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLGY 358
Query: 358 ---SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
EL+ G E +++++ +MDSMT EEL NP ++N SRI RIARGSG +R+
Sbjct: 359 SLPDELISVGEE-----RLRKFKVIMDSMTEEEL--MNPDIINYSRIKRIARGSGTSIRD 411
Query: 415 VMEMLEEYKRLAKIWSKM 432
V E+L +YK++ K + M
Sbjct: 412 VRELLNQYKQMKKFFKSM 429
>gi|226287163|gb|EEH42676.1| signal recognition particle 54 kDa protein [Paracoccidioides
brasiliensis Pb18]
Length = 530
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/439 (48%), Positives = 288/439 (65%), Gaps = 5/439 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ IDE+ + + EI A F K V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSSNIDEQAFDAMIKEICAASSPPTSTFASSSLSANPSKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 QFSSLPPAVNKKRLIQKTVFDQLVALVDPHCEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQEA LF EM Q+ A PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEADLFAEMTQIQTAIKPDQTILVLDGTIGQAAEIQSSAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGAAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+G ++ + V E + ++ G FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 301 AGLVEHVQAVTKDSATAKETYKHITAGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN- 359
Query: 360 LMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 417
+ G + E + K++R + + DSMT ELD ++ SRI+R+A GSG VREV +
Sbjct: 360 -ITSGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFIDQPSRIVRVACGSGTTVREVED 418
Query: 418 MLEEYKRLAKIWSKMKGLK 436
+L ++K +A + ++ G K
Sbjct: 419 LLSQHKMMAGMAKRVGGQK 437
>gi|300706383|ref|XP_002995462.1| hypothetical protein NCER_101628 [Nosema ceranae BRL01]
gi|239604578|gb|EEQ81791.1| hypothetical protein NCER_101628 [Nosema ceranae BRL01]
Length = 466
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/478 (43%), Positives = 315/478 (65%), Gaps = 24/478 (5%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ LG SI+ ++ ++ ++ I D+ + +++I +L+ ++V LV +++ N+ + +
Sbjct: 1 MITDLGKSITASLSRLFSSNITDDSI-KYIIDDICTSLINSNVNPMLVEKIRNNLNEKI- 58
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
L + G NK+++I+ A+FNEL ++DP S +KGK +V++FVGLQG+GKTT+ KY
Sbjct: 59 LSENIQGFNKQKVIETAVFNELVSLVDPKIKSKELEKGKSNVVVFVGLQGAGKTTSICKY 118
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y++KKG K ALVCADTFRAGAF+Q+KQNA K K+PFYGS E+DPV +A+EGV FKK
Sbjct: 119 ANYYKKKGLKVALVCADTFRAGAFEQIKQNAMKIKVPFYGS-EEADPVVVALEGVSRFKK 177
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E+ DLI VDTSGRH QE LF EM + A PD +IFVMD+ IGQ+A DQA FK +V+
Sbjct: 178 EDFDLICVDTSGRHTQEKDLFTEMTDIINAVTPDNIIFVMDAGIGQSAEDQALGFKNAVN 237
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I++K+DG K GGA+S+VA+ + P++F+GTGE+M++FEVF+ K FV R+LGMGD
Sbjct: 238 VGSIIISKIDGTVKAGGAISSVASIQCPILFVGTGENMEDFEVFEPKGFVGRMLGMGDLH 297
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
G KI + + +D++ EL K +G FTL QF+ +L +GP+ ++ MLPG S+ M
Sbjct: 298 GLSRKISD-LKIDEK-ELFNKFQKGTFTLNDFSVQFKQLLSLGPMTKLLEMLPGTSNFQM 355
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKL-MNDSRIMRIARGSGRQVREVMEMLE 420
P + K K+ + ++DS++ EL+S + +SRI+RIA+GS +EV ++L
Sbjct: 356 P------DEKKFKKLICILDSLSKSELNSDGLIIEKENSRILRIAKGSASTPQEVYDLLV 409
Query: 421 EY-------KRLAKI--WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGG 469
++ KR A I +S + G K P G +S + Q +LP+ +L + G
Sbjct: 410 QFRNMSNMMKRFANIPGYSDLIG-KDP--GSLSESQKAKFKQQAKGMLPKDLLDSMNG 464
>gi|308162746|gb|EFO65124.1| SRP GTPase [Giardia lamblia P15]
Length = 530
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/503 (41%), Positives = 311/503 (61%), Gaps = 26/503 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-KI 59
MVL +LG S+ I + + + + +N ++E L ADV + + M+ ++ KI
Sbjct: 1 MVLNELGSSVLNVITKFAKTRLTTNEAVNALVDEFIGVLEAADVPARTLEPMRKSMTTKI 60
Query: 60 VNLDDLAAGH-NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTC 118
++ + G N +++Q+ + EL ML P +P F P + + +VIMFVGLQG+GKTTTC
Sbjct: 61 LSDPAIMEGRANTHQVVQRIVVQELVSMLSPERPPFRPVRNRANVIMFVGLQGAGKTTTC 120
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
K+ Y+++KGW+ LVC DTFR GAFDQLKQN T ++PFYGSY+E DPV+IA +GV+
Sbjct: 121 VKFGAYYKRKGWRVGLVCCDTFRTGAFDQLKQNCTAVRLPFYGSYSEKDPVQIAQDGVKH 180
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
F N +LII+DTSGRH+QE ALF EM+ + A P +FV+DSSIGQAA++QA AF
Sbjct: 181 FIGLNFELIILDTSGRHRQEEALFTEMKLIDSAVQPHDHVFVLDSSIGQAAYEQADAFSN 240
Query: 239 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 298
+V +G+VI+TK+DGH++GGGAL+AV+ATK+P++F+GTGE +++ E FD FVS +LG G
Sbjct: 241 AVEIGSVILTKLDGHSRGGGALAAVSATKAPIVFLGTGEKIEDLEFFDSSRFVSVMLGYG 300
Query: 299 DWSGFMDKIHEVVP---MDQQPEL--LQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 353
D G +HE + +D + + + ++ +F+ R EQ +N+ KMGP+ ++ SM+
Sbjct: 301 DIVG----LHEAMQGGNIDHKAHIQTVVRMLHNHFSFRDFKEQLKNLNKMGPLQKIASMV 356
Query: 354 PGFSSELMPKGREKESQAK-IKRYMTMMDSMTNEELDSSNPKLMND------SRIMRIAR 406
PGFS + +S+ K ++ + T+MDSM +ELDS+ L + SR+ RIA
Sbjct: 357 PGFSQMAASGDIDMDSEVKHLQIFNTIMDSMAAKELDSNTELLRKEGEDKFRSRVKRIAI 416
Query: 407 GSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQ 466
GSG V EV+E ++ ++I+ KM G K+ + L +M +
Sbjct: 417 GSGHTVDEVLEFFDKATEFSEIFGKM-GRKMKSPAALQELFSSMKMNPQMMQ------QM 469
Query: 467 IGGVGGLQNLMKQMGSTKDMMGM 489
+ G+G LQN M +M MGM
Sbjct: 470 MSGLGSLQN-MSEMADIAKSMGM 491
>gi|159117703|ref|XP_001709071.1| SRP GTPase [Giardia lamblia ATCC 50803]
gi|157437186|gb|EDO81397.1| SRP GTPase [Giardia lamblia ATCC 50803]
Length = 530
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/503 (40%), Positives = 311/503 (61%), Gaps = 26/503 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-KI 59
MVL +LG ++ I + + + + +N ++E L ADV + + M+ ++ KI
Sbjct: 1 MVLNELGSNVLNVITKFAKTRLTTNEAVNALVDEFIGVLEAADVPARTLEPMRKSMTTKI 60
Query: 60 VNLDDLAAGH-NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTC 118
++ + G N +++Q+ + EL ML P +P F P + + +VIMFVGLQG+GKTTTC
Sbjct: 61 LSDPAIMEGRANTHQVVQRIVVQELVSMLSPERPPFRPVRNRANVIMFVGLQGAGKTTTC 120
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
K+ Y+++KGW+ LVC DTFR GAFDQLKQN T K+PFYGSY+E DPV+IA +GV+
Sbjct: 121 VKFGAYYKRKGWRVGLVCCDTFRTGAFDQLKQNCTAVKLPFYGSYSEKDPVQIAQDGVKH 180
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
F N +LII+DTSGRH+QE ALF EM+ + A P +FV+DSSIGQAA++QA AF
Sbjct: 181 FVSLNFELIILDTSGRHRQEEALFTEMKLIDSAVQPHDHVFVLDSSIGQAAYEQADAFSN 240
Query: 239 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 298
+V +G+VI+TK+DGH++GGGAL+AV+ATK+P++F+GTGE +++ E FD FVS +LG G
Sbjct: 241 AVEIGSVILTKLDGHSRGGGALAAVSATKAPIVFLGTGEKIEDLEFFDPSRFVSVMLGYG 300
Query: 299 DWSGFMDKIHEVVP---MDQQPEL--LQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 353
D G +HE + +D + + + ++ +F+ R EQ +N+ KMGP+ ++ SM+
Sbjct: 301 DIVG----LHEAMQGGNIDHKAHIQTVVRMLHNHFSFRDFKEQLKNLNKMGPLQKIASMV 356
Query: 354 PGFSSELMPKGREKESQAK-IKRYMTMMDSMTNEELDSSNPKLMND------SRIMRIAR 406
PGFS + +S+ K ++ + T+MDSM +ELDS+ L + SR+ RIA
Sbjct: 357 PGFSQMAASGDIDMDSEVKHLQIFNTIMDSMAAKELDSNTELLKKEGEDKFRSRVRRIAI 416
Query: 407 GSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQ 466
GSG + EV+E ++ ++I+ KM G K+ + L +M +
Sbjct: 417 GSGHTIEEVLEFFDKATEFSEIFGKM-GRKMKSPAALQELFSSMKMNPQMMQ------QM 469
Query: 467 IGGVGGLQNLMKQMGSTKDMMGM 489
+ G+G LQN M +M MGM
Sbjct: 470 MNGLGSLQN-MSEMADIAKSMGM 491
>gi|123974885|ref|XP_001314049.1| SRP54-type protein [Trichomonas vaginalis G3]
gi|121896072|gb|EAY01234.1| SRP54-type protein, putative [Trichomonas vaginalis G3]
Length = 482
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/485 (42%), Positives = 310/485 (63%), Gaps = 14/485 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I + + A+ +D++ + + ++T AL ADV +V + + I
Sbjct: 1 MVLQDLGEKILAGLSNLGKASKVDDEFVKQYAKDMTNALKAADVSGPIVLQFFKQLISI- 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DL G + ++ I++ L ++DP ++ P KGKP+V MFVGLQGSGKTTTCTK
Sbjct: 60 KVSDLPPGVSIKKHIERETLRLLVDLVDPKVDAYKPTKGKPNVYMFVGLQGSGKTTTCTK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
Y++K+G+K LV ADTFRAGA +QL QNA +P+Y DP+ +A+ GVE FK
Sbjct: 120 LGLYYKKRGFKVGLVGADTFRAGAREQLMQNAQSVGLPYYVDLVNIDPISVAISGVEKFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E D+IIVDTSG+H QE ALF+EM+++ +A NPD +IFV+D++IGQ+AFDQA AF ++V
Sbjct: 180 RERYDMIIVDTSGKHAQENALFQEMQEMQDAINPDEIIFVLDANIGQSAFDQATAFSKAV 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++I+TK+D KGGGA+SAVAATK P+ F GTGE MD+ E+FD F++ +LG D
Sbjct: 240 DIGSIIMTKLDSGTKGGGAISAVAATKCPIAFYGTGEEMDQLEIFDPNSFIANILGYADP 299
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
M K+ EVV MD+Q EL Q++ +G + R MYEQ++ IL MG I + + + G S L
Sbjct: 300 KALMHKL-EVVDMDKQAELAQRIMKGQYGFREMYEQYKTILDMGDITGIINAV-GMKS-L 356
Query: 361 MPKGREKES-QAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 418
+PKG + + +K+Y+ ++DSM+++E+D +P L + +RI+RI+RG+G + + +
Sbjct: 357 LPKGFSNDDMTSTLKKYLVIIDSMSDKEMD--DPSLFKEKNRIVRISRGTGMKTEMIEMV 414
Query: 419 LEEYKRLAKIW-----SKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGL 473
++E K A+ + +KM + G+MS AQ M+K + G+ KQ+ G
Sbjct: 415 IKEQKNFAQAFKAFSKNKMFSNMLQNSGKMSQNEMMQAAQQMAKNINPGLAKQLKS-GNF 473
Query: 474 QNLMK 478
NL+K
Sbjct: 474 GNLLK 478
>gi|240104007|ref|YP_002960316.1| signal recognition particle protein Srp54 [Thermococcus
gammatolerans EJ3]
gi|259511389|sp|C5A233.1|SRP54_THEGJ RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|239911561|gb|ACS34452.1| Signal recognition particle, subunit SRP54 (srp54) [Thermococcus
gammatolerans EJ3]
Length = 448
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/441 (44%), Positives = 293/441 (66%), Gaps = 7/441 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ ++ +DE ++ E + +I RAL+Q+DV +LV ++ I++
Sbjct: 1 MALEKLGKALNSALRKLARSSTVDEALIREVVRDIQRALIQSDVNVRLVLQLTKRIQERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPK-KGKPSVIMFVGLQGSGKTTTCT 119
+ AG + R + + ++ EL K+L GK + + + KP++++ VG+QGSGKTTT
Sbjct: 61 LNEKPPAGVSPREHVIKIVYEELTKLL--GKEAVPLEIREKPTILLTVGIQGSGKTTTIA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + QK+G+K LVC DT+R GA+ QLKQ I +G E D +++A EGVE F
Sbjct: 119 KLARHLQKRGYKVGLVCTDTWRPGAYYQLKQLVEPYNIEVFGDPGEKDAIKLAREGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + D+IIVDT+GRHK+E+ L EEM+Q+SEA P VI V+D +IGQ A+ QA AFK++
Sbjct: 179 KDKGVDVIIVDTAGRHKEESGLIEEMKQISEAIKPHEVILVIDGTIGQQAYHQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPKRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
G ++KI E+ + + E ++K G F L+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 299 IQGLLEKIEELQKEQEFKEEDVEKFLRGKFNLKDMYAQLEAMQKMGPLKQILQMIPGLGY 358
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
L P + + K++RY +MDSMT EEL+ NP ++N SRI RIARGSG REV E+
Sbjct: 359 SL-PDEAVRVGEEKLRRYRIIMDSMTEEELE--NPDIINYSRIKRIARGSGTSTREVREL 415
Query: 419 LEEYKRLAKIWSKMKGLKIPK 439
L +Y ++ K++ + K+ K
Sbjct: 416 LAQYNQMRKMFKNLDKRKLAK 436
>gi|315230023|ref|YP_004070459.1| signal recognition particle [Thermococcus barophilus MP]
gi|315183051|gb|ADT83236.1| signal recognition particle [Thermococcus barophilus MP]
Length = 448
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/434 (45%), Positives = 287/434 (66%), Gaps = 7/434 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L LG +++ A+++++ A +DE ++ E + +I RAL+ +DV KLV ++ I+K
Sbjct: 1 MALESLGKALNAALKKLARAGSVDEVLIKEVVRDIQRALIMSDVNVKLVLDLTKKIQKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG ++R I + ++ EL L KP K KP++++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGVSRREHIIKIVYEELTNFLGKEAKP--IEIKEKPTILLTVGIQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K LVC+DT+R GA+ QLKQ I +G E D VR+A EGVE F
Sbjct: 119 KLARYFQKRGYKVGLVCSDTWRPGAYHQLKQLVEPYSIEVFGDPNEKDAVRLAKEGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + D+IIVD++GRHK+E +L EEM+Q+S+A NP VI V+D +IGQ A+ QA AFK++
Sbjct: 179 KHKGVDIIIVDSAGRHKEEKSLIEEMKQISDAINPHEVILVIDGTIGQQAYSQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAV AT +P+ FIG GE +D+ E FD K FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVVATGAPIKFIGVGERIDDLEPFDPKRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
G ++K E+ + + E L+K G F L+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 299 IQGLLEKFEELSKAQELKEEDLEKFMRGKFNLKDMYAQLEAMSKMGPLKQILQMIPGLGY 358
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
L P + S+ +++++ +MDSMT EEL+ +P+++N SRI RIARGSG V++V E+
Sbjct: 359 SL-PDDVVRVSEQRLRKFKVIMDSMTEEELE--HPEIINYSRIKRIARGSGTTVKDVKEL 415
Query: 419 LEEYKRLAKIWSKM 432
LE+Y ++ K + M
Sbjct: 416 LEQYNQMKKFFKSM 429
>gi|223477851|ref|YP_002582335.1| Signal recognition 54kDa protein [Thermococcus sp. AM4]
gi|214033077|gb|EEB73905.1| Signal recognition 54kDa protein [Thermococcus sp. AM4]
Length = 448
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/441 (44%), Positives = 293/441 (66%), Gaps = 7/441 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ ++ +DE ++ E + +I RAL+Q+DV +LV ++ I++
Sbjct: 1 MALEKLGKALNSALRKLARSSTVDEALIREVVRDIQRALIQSDVNVRLVLQLTKRIQERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPK-KGKPSVIMFVGLQGSGKTTTCT 119
+ AG + R + + ++ EL K L GK + + + KP++++ VG+QGSGKTTT
Sbjct: 61 LNEKPPAGVSPREHVVKIVYEELTKFL--GKEAVPLEIREKPTILLTVGIQGSGKTTTIA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + QK+G+K LVC DT+R GA+ QLKQ I +G E D +++A EGVE F
Sbjct: 119 KLARHLQKRGYKVGLVCTDTWRPGAYYQLKQLVEPYNIEVFGDPNEKDAIKLAREGVEHF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+++ D+IIVDT+GRHK+E+ L EEM+Q+SEA P VI V+D +IGQ A+ QA AFK++
Sbjct: 179 REKGVDVIIVDTAGRHKEESGLIEEMKQISEAIKPHEVILVIDGTIGQQAYHQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPKRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
G ++KI E+ + + E ++K G F L+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 299 IQGLLEKIEELQKEQEFKEEDVEKFLRGKFNLKDMYAQLEAMQKMGPLKQILQMIPGLGY 358
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
L P + + K++RY +MDSMT EEL+ NP ++N SRI RIARGSG REV E+
Sbjct: 359 SL-PDDAIRVGEEKLRRYRIIMDSMTEEELE--NPDIINYSRIKRIARGSGTSTREVREL 415
Query: 419 LEEYKRLAKIWSKMKGLKIPK 439
L +Y ++ K++ + K+ K
Sbjct: 416 LAQYNQMRKMFKNLDKRKLAK 436
>gi|212223269|ref|YP_002306505.1| signal recognition particle protein Srp54 [Thermococcus onnurineus
NA1]
gi|229558607|sp|B6YSS1.1|SRP54_THEON RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|212008226|gb|ACJ15608.1| signal recognition particle, SRP54 subunit [Thermococcus onnurineus
NA1]
Length = 448
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/453 (43%), Positives = 299/453 (66%), Gaps = 13/453 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ ++ +DE + E + +I RAL+QADV +LV ++ I+K
Sbjct: 1 MALEKLGKALNNALRKLARSSTVDEATIKEVVRDIQRALIQADVNVRLVLDLTKRIEKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ G +K+ I + ++ EL K L KP K KP+V++ VG+QGSGKTT+
Sbjct: 61 LEEEPPTGVSKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTVLLTVGIQGSGKTTSIA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K LVC+DT+R GA+ QLKQ I +G E D +++A EGVE F
Sbjct: 119 KLARYFQKRGYKVGLVCSDTWRPGAYQQLKQLVEPFGIEVFGDPEEKDAIKLAKEGVEHF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+++ D+IIVD++GRHK+E +L EEM+Q+S A P VI V+D +IGQ A++QA AFK++
Sbjct: 179 REKGVDIIIVDSAGRHKEEKSLIEEMKQISAAIKPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGERIDDLEPFDPKRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
G ++K E+ + + E L+K +G F L+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 299 IQGLLEKFEELQKQQEFREEDLEKFLKGKFNLKDMYAQLEAMQKMGPLKQILQMIPGMGY 358
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
L P + + ++K++ +MDSMT EEL+ +P+++N SRI RIARGSG ++EV E+
Sbjct: 359 SL-PDDAVRVGEERLKKFKVIMDSMTEEELE--HPEIINYSRIKRIARGSGTSIQEVREL 415
Query: 419 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMN 451
L +Y ++ K++ M K ++S ++R N
Sbjct: 416 LHQYNQMKKMFKSM------DKRKLSKMARKFN 442
>gi|164658964|ref|XP_001730607.1| hypothetical protein MGL_2403 [Malassezia globosa CBS 7966]
gi|159104503|gb|EDP43393.1| hypothetical protein MGL_2403 [Malassezia globosa CBS 7966]
Length = 617
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 229/557 (41%), Positives = 323/557 (57%), Gaps = 75/557 (13%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG +++A + +D +++ L ++ ALL +DV +LV++++ ++K V
Sbjct: 1 MVLADLGRRLNQAFSDLQRQPTLDAASVDQLLKDVCSALLASDVNVRLVQKLRQDVKDEV 60
Query: 61 N--LDDLAAGHN-----KRRIIQQAIFNELCKMLDPGKPSFTPK--KGKPSVIMFVGLQG 111
+ L+D + ++ +Q+ +F+ L K++DPG S + KG+ VIMFVGLQG
Sbjct: 61 SSLLNDKGKAESYTDAQRKHQVQRIVFDYLVKLVDPGDGSTKHRLDKGQQHVIMFVGLQG 120
Query: 112 SGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRI 171
SGKTT+CTK A ++QK+G++ LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV I
Sbjct: 121 SGKTTSCTKLALWYQKRGYRTGLVCADTFRAGAFDQLKQNAAKARIPFYGSYTETDPVAI 180
Query: 172 AVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFD 231
A GV +FKK D+IIVDTSGRHKQE LF EM +S A P I V+D+SIGQAA
Sbjct: 181 ASAGVTSFKKNRFDVIIVDTSGRHKQEKDLFAEMVDISRAVKPSQTIMVLDASIGQAAEA 240
Query: 232 QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFV 291
Q +AFK++ GA+ VTK+DGHAKGGGA+SAVA+T++P+IFIGTGEH+ + E F +PF+
Sbjct: 241 QCRAFKEAADFGAMFVTKLDGHAKGGGAISAVASTQTPIIFIGTGEHVHDLEPFRARPFI 300
Query: 292 SRLLGMGDWSGFMDKIHEVV----PMDQQPELLQKLSE-GNFTLRIMYEQFQNILKMGPI 346
S+LLG+GD +G MDK+ EV +Q ++++K+ E G FT+R EQ +I MGP+
Sbjct: 301 SKLLGLGDLTGLMDKMEEVHMNEDVQQRQRDMMKKIQEGGTFTIRDWREQITHIQSMGPM 360
Query: 347 GQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDS---------------- 390
++ M+PG S + + + K K + + DSMT EELDS
Sbjct: 361 SKMAGMIPGMSQMMGHAPSDATANDKFKIMLYITDSMTPEELDSDGSCFTKPIKTSTSRA 420
Query: 391 ----------------------------SNPKLMNDSRIMRIARGSGRQVREVMEMLEEY 422
S L SR +R+ARGSG VR+V E L +Y
Sbjct: 421 AAARSHSDEKAQSRTAANTNANANDKTKSKAPLRLTSRALRVARGSGTSVRDVEEFLMQY 480
Query: 423 KRLAKIWSKMKG--------------LKIPKKGEMSALSRNMN---AQHMSKVLPQGMLK 465
+ ++++ K G +G M L M A M LP +
Sbjct: 481 RTISQMVKKFGGKNSWLQQMKSGGGSGAGAGRGGMPMLPPGMTREQAMKMQNALPADIKA 540
Query: 466 QIGGVGGLQNLMKQMGS 482
Q+ GG + LM+Q+ S
Sbjct: 541 QLRQPGGREQLMRQLQS 557
>gi|375083524|ref|ZP_09730543.1| signal recognition particle protein Srp54 [Thermococcus litoralis
DSM 5473]
gi|375083969|ref|ZP_09730981.1| signal recognition particle protein Srp54 [Thermococcus litoralis
DSM 5473]
gi|374741396|gb|EHR77822.1| signal recognition particle protein Srp54 [Thermococcus litoralis
DSM 5473]
gi|374741717|gb|EHR78136.1| signal recognition particle protein Srp54 [Thermococcus litoralis
DSM 5473]
Length = 448
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/441 (45%), Positives = 290/441 (65%), Gaps = 7/441 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG S++ A+++++ A+ +DE ++ E + +I RALL +DV +LV ++ I+K
Sbjct: 1 MVLDKLGQSLNNALRKLARASTVDEALVREVVRDIQRALLTSDVNVRLVLDLTKKIEKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL L KP K KP++++ VG+QGSGKTT+
Sbjct: 61 LEEKPPAGVSKKEHIIKIVYEELTSFLGKEAKP--IEIKEKPTILLTVGIQGSGKTTSVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK G+K LVC+DT+R GA+ QLKQ I +G E D V++A EGVE F
Sbjct: 119 KLARYFQKHGYKVGLVCSDTWRPGAYFQLKQLVEPYGIEVFGDPEEKDAVKLAKEGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KK+ D+IIVD++GRHK+E L EEM+Q+S A NP VI V+D +IGQ A++QA AFK++
Sbjct: 179 KKKGVDVIIVDSAGRHKEEKGLIEEMKQISNAINPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAV AT +P+ FIG GE +D+ E FD K FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVVATGAPIKFIGVGEKIDDLEPFDPKRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
G ++K E+ + E ++K G F L+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 299 IQGLLEKFEELSKETEFTEEDVEKFLRGKFNLKDMYAQLEAMRKMGPLQQILKMIPGMGY 358
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
+ P K S+ ++K++ +MDSMT EEL+ NP+++N SRI RIARGSG ++V E+
Sbjct: 359 SI-PDEVIKVSEERLKKFKVIMDSMTEEELE--NPEIINYSRIKRIARGSGTSTKDVKEL 415
Query: 419 LEEYKRLAKIWSKMKGLKIPK 439
L +YK++ K + M K+ K
Sbjct: 416 LNQYKQMKKFFKGMDKRKLAK 436
>gi|15594157|dbj|BAB64926.1| signal recognition particle protein 54 [Pyrococcus furiosus]
Length = 443
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/451 (43%), Positives = 299/451 (66%), Gaps = 13/451 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG +++ +++++ A+ +DE ++ E + +I RAL+QADV +LV ++ I++
Sbjct: 1 MVLDNLGKALANTLKKIARASSVDEALIKELVRDIQRALIQADVNVRLVLQLTREIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL K L KP K KP++++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTILLMVGIQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QL+Q + I +G+ E D +++A EGV+ F
Sbjct: 119 KLARYFQKRGYKVGVVCSDTWRPGAYHQLRQVLDRYHIEVFGNPQEKDAIKLAKEGVDYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + D+IIVDT+GRHK++ AL EEM+Q+S +P VI V+D +IGQ A++QA AFK++
Sbjct: 179 KSKGVDIIIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIGTGE +D+ E FD FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
G ++K E+ ++ + E +++ G FTL+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 299 IQGLLEKFKELEKEVEIKEEDIERFLRGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLGY 358
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
L P + ++K++ +MDSMT EEL NP+++N SRI RIARGSG ++V E+
Sbjct: 359 SL-PDDVISIGEERLKKFKVIMDSMTEEEL--LNPEIINYSRIKRIARGSGTSTKDVKEL 415
Query: 419 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRN 449
L++Y+++ K++ M K ++S L+R
Sbjct: 416 LDQYRQMKKLFKSM------NKRQLSRLARR 440
>gi|18978103|ref|NP_579460.1| signal recognition particle protein Srp54 [Pyrococcus furiosus DSM
3638]
gi|397652622|ref|YP_006493203.1| signal recognition particle protein Srp54 [Pyrococcus furiosus
COM1]
gi|23822176|sp|Q8U070.1|SRP54_PYRFU RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|211939182|pdb|3DM5|A Chain A, Structures Of Srp54 And Srp19, The Two Proteins Assembling
The Ribonucleic Core Of The Signal Recognition Particle
From The Archaeon Pyrococcus Furiosus.
gi|211939183|pdb|3DM5|B Chain B, Structures Of Srp54 And Srp19, The Two Proteins Assembling
The Ribonucleic Core Of The Signal Recognition Particle
From The Archaeon Pyrococcus Furiosus.
gi|18893898|gb|AAL81855.1| signal recognition particle protein srp54 [Pyrococcus furiosus DSM
3638]
gi|393190213|gb|AFN04911.1| signal recognition particle protein Srp54 [Pyrococcus furiosus
COM1]
Length = 443
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/451 (43%), Positives = 299/451 (66%), Gaps = 13/451 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG +++ +++++ A+ +DE ++ E + +I RAL+QADV +LV ++ I++
Sbjct: 1 MVLDNLGKALANTLKKIARASSVDEALIKELVRDIQRALIQADVNVRLVLQLTREIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL K L KP K KP++++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTILLMVGIQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QL+Q + I +G+ E D +++A EGV+ F
Sbjct: 119 KLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHIEVFGNPQEKDAIKLAKEGVDYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + D+IIVDT+GRHK++ AL EEM+Q+S +P VI V+D +IGQ A++QA AFK++
Sbjct: 179 KSKGVDIIIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIGTGE +D+ E FD FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
G ++K E+ ++ + E +++ G FTL+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 299 IQGLLEKFKELEKEVEIKEEDIERFLRGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLGY 358
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
L P + ++K++ +MDSMT EEL NP+++N SRI RIARGSG ++V E+
Sbjct: 359 SL-PDDVISIGEERLKKFKVIMDSMTEEEL--LNPEIINYSRIKRIARGSGTSTKDVKEL 415
Query: 419 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRN 449
L++Y+++ K++ M K ++S L+R
Sbjct: 416 LDQYRQMKKLFKSM------NKRQLSRLARR 440
>gi|154285458|ref|XP_001543524.1| hypothetical protein HCAG_00570 [Ajellomyces capsulatus NAm1]
gi|150407165|gb|EDN02706.1| hypothetical protein HCAG_00570 [Ajellomyces capsulatus NAm1]
Length = 353
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/349 (51%), Positives = 241/349 (69%), Gaps = 1/349 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +D + + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNVDAQAFDAMIKEICAALLSADVNVRLVQSLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 PFSSLPPAVNKKRLIQKTVFDQLVALVDPHAEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE LF EM Q+ A PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFVEMTQIQTAIQPDQTILVLDGTIGQAAESQSAAFKAAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG+A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGNAAGGGAISAVAATHTPIIFLGTGEHMLDLERFSPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQ 348
+ ++ + V E + +S G FTLR E +I+KMGP+ Q
Sbjct: 301 ASLVEHVQAVTKDSATAKETYKHISAGIFTLRDFRENITSIMKMGPLYQ 349
>gi|189206976|ref|XP_001939822.1| signal recognition particle 54 kDa protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187975915|gb|EDU42541.1| signal recognition particle 54 kDa protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 489
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/404 (50%), Positives = 285/404 (70%), Gaps = 26/404 (6%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
+ EI+ AL++ADV KLV ++ +IK+ V+ LA G NK+R+IQ+A+F+EL KM+DP
Sbjct: 2 VKEISNALVEADVNVKLVMNLRQSIKRTVDFKHLAPGVNKKRLIQKAVFDELVKMVDPHA 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F P+KGK +VIMFVGLQG+GKTTTCTK A ++Q +G+K LVCADTFRAGAFDQLKQN
Sbjct: 62 EPFKPRKGKSNVIMFVGLQGAGKTTTCTKLARWYQARGFKACLVCADTFRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS+T++DPV +A EGVE FKKE ++IIVDTSGRH+QE LF+EM
Sbjct: 122 ATKAKIPYYGSHTQTDPVVVAGEGVEKFKKERFEIIIVDTSGRHRQEKDLFDEM------ 175
Query: 212 TNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVI 271
AA QA+AFK++ GA+I+TK DG A GGGA+SAVAAT +P++
Sbjct: 176 ----------------AAESQARAFKEAADFGAIIITKTDGAAAGGGAISAVAATHTPIV 219
Query: 272 FIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
F+G GEHM + E F + FVS+LLGMGD G ++ + + +DQ+ + ++ +++G FT++
Sbjct: 220 FLGNGEHMLDLERFAPQAFVSKLLGMGDVQGLVEHVQS-LKLDQK-DTMKHITQGIFTIK 277
Query: 332 IMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSS 391
+ +Q NI+KMGP+ ++ M+PG S +M ++E K+KR + + DSMT +EL+S
Sbjct: 278 DLRDQLSNIMKMGPLSKMAGMIPGLGS-MMGGMDDEEGGMKLKRMIYICDSMTEKELESD 336
Query: 392 NPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKG 434
++ +R+ RIARGSG VREV E+L +++ +A + KMKG
Sbjct: 337 GKMFVDQPTRMTRIARGSGTSVREVEELLTQHRMMAGMAKKMKG 380
>gi|150399615|ref|YP_001323382.1| signal recognition particle protein Srp54 [Methanococcus vannielii
SB]
gi|166222337|sp|A6UQJ8.1|SRP54_METVS RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|150012318|gb|ABR54770.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanococcus vannielii SB]
Length = 450
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/445 (44%), Positives = 292/445 (65%), Gaps = 14/445 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSEALNKIKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + +++EL K+L +P K P K SVI+ VG+QGSGKTT+
Sbjct: 61 EEAPPKGFSKKEHIIKIVYDELVKLLGENPQKLELDP--SKKSVILLVGIQGSGKTTSSA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVET 178
K A Y QKKG KPAL+ AD +R A+ QLKQ + K +P +G T++ PV I EG+E
Sbjct: 119 KLARYIQKKGMKPALIAADIYRPAAYQQLKQLSEKINVPLFGDETKTKTPVEIVKEGIEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
KK D++I+DT+GRHK+E +L EEM+Q+ E TNP+ +I V+D ++GQ A +QA+AFK
Sbjct: 179 LKK--SDVLIIDTAGRHKEEESLLEEMKQMKEITNPNEIILVIDGTLGQQAKNQAKAFKD 236
Query: 239 SVS-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+VS +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SRLLGM
Sbjct: 237 AVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLETFDPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
GD ++K +V MD+ E + + +G FTL +Y Q + I KMGP+ Q+ M+PGF
Sbjct: 297 GDLDSLLEKTEDV--MDESTEESIDSILKGKFTLVELYAQLETISKMGPMKQIMGMIPGF 354
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 416
MPK + ++ K+KRY MMDSMT EE NP+L+ SR+ RIA+G+G + E+
Sbjct: 355 GGN-MPKEAAQLTEQKLKRYKIMMDSMTMEE--KENPELIKTSRLQRIAKGAGVKQDEIK 411
Query: 417 EMLEEYKRLAKIWSKMKGLKIPKKG 441
++L+ Y + +K K+PK G
Sbjct: 412 DLLKYYATTKNAFGNLKRGKMPKMG 436
>gi|341582011|ref|YP_004762503.1| signal recognition particle protein Srp54 [Thermococcus sp. 4557]
gi|340809669|gb|AEK72826.1| signal recognition particle protein Srp54 [Thermococcus sp. 4557]
Length = 448
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/441 (45%), Positives = 293/441 (66%), Gaps = 7/441 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ + +DE + E + +I RAL+QADV +LV ++ I+K
Sbjct: 1 MALEKLGKALNSALKKLARSKTVDEATIKEVVRDIQRALIQADVNVRLVLQLTKTIEKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPK-KGKPSVIMFVGLQGSGKTTTCT 119
++ AG +K+ I Q ++ EL K L GK S + K KP+V++ VG+QGSGKTT+
Sbjct: 61 LEEEPPAGASKKEHIIQIVYEELTKFL--GKESKPLEIKEKPTVLLTVGIQGSGKTTSVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + QK+G+K +VC+DT+R GA+ QLKQ I G E D V++A EGVE F
Sbjct: 119 KLARHLQKRGYKVGVVCSDTWRPGAYYQLKQLLEPYGIEVSGDPEEKDAVKLAYEGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K ++ D+IIVD++GRHK+E+ L EEM+Q+S+A P VI V+D +IGQ A++QA AFK++
Sbjct: 179 KGKDVDVIIVDSAGRHKEESGLIEEMKQISQAIKPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLGMGD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGERIDDLEAFDPKRFVSRLLGMGD 298
Query: 300 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
G ++K+ E+ E L+K +G F L+ MY Q + + KMGP+ QV M+PG
Sbjct: 299 IEGLLEKLEELQKQQAVSEEDLEKFLKGKFNLKDMYAQLEAMQKMGPLKQVLQMIPGLGY 358
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
L P + + K++RY +MDSMT EEL+ +P+++N SRI RIARGSG EV E+
Sbjct: 359 SL-PDDAVRVGEEKLRRYRVIMDSMTEEELE--HPEIINYSRIKRIARGSGTSTAEVREL 415
Query: 419 LEEYKRLAKIWSKMKGLKIPK 439
L +Y ++ K++ M K+ K
Sbjct: 416 LNQYNQMKKMFKSMDKRKLAK 436
>gi|242399400|ref|YP_002994824.1| Signal recognition 54 kDa protein [Thermococcus sibiricus MM 739]
gi|242265793|gb|ACS90475.1| Signal recognition 54 kDa protein [Thermococcus sibiricus MM 739]
Length = 453
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/441 (43%), Positives = 292/441 (66%), Gaps = 7/441 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG S++ A+++++ A+ +DE ++ + + +I RAL+ +DV +LV ++ I+K
Sbjct: 6 MVLDKLGQSLNNALKKLARASTVDEALVRDVVRDIQRALITSDVNVRLVLDLTKKIEKRA 65
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL L KP K KP+V++ VG+QGSGKTT+
Sbjct: 66 LEEKPPAGVSKKEHIVKIVYEELTNFLGKEAKP--VEIKAKPTVLLTVGIQGSGKTTSVA 123
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K + Y QK G+K +VC+DT+R GA+ QLKQ I +G+ E + +++A EGVE F
Sbjct: 124 KLSRYFQKHGYKVGVVCSDTWRPGAYQQLKQLIEPYGIEVFGNPEEKNAIKLAKEGVEYF 183
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KK+ D+IIVD++GRHK+E L EEMRQ+S NP VI ++D +IGQ A++QA AFK++
Sbjct: 184 KKKGVDVIIVDSAGRHKEEKGLIEEMRQISNTINPHEVILIIDGTIGQQAYNQALAFKEA 243
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAV AT +P+ FIG GE +D+ E FD K FVSRLLG+GD
Sbjct: 244 TPIGSIIVTKLDGSAKGGGALSAVVATGAPIKFIGVGEKIDDLEPFDPKRFVSRLLGLGD 303
Query: 300 WSGFMDKIHEVV-PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
G ++K E+ ++ + E ++K +G F L+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 304 IQGLLEKFEELSKEVEFKEEDMEKFLKGKFNLKDMYAQLEAMKKMGPLQQILKMIPGMGY 363
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
L P + S+ ++K++ +MDSMT EEL+ NP+++N SRI RIARGSG ++V E+
Sbjct: 364 SL-PDEMVRMSEVRLKKFKVIMDSMTEEELE--NPEIINYSRIKRIARGSGTTTKDVKEL 420
Query: 419 LEEYKRLAKIWSKMKGLKIPK 439
+ +Y ++ K + M K+ K
Sbjct: 421 INQYNQMKKFFRSMDKRKLAK 441
>gi|390960743|ref|YP_006424577.1| signal recognition particle protein SRP54 [Thermococcus sp. CL1]
gi|390519051|gb|AFL94783.1| signal recognition particle protein SRP54 [Thermococcus sp. CL1]
Length = 448
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/441 (45%), Positives = 292/441 (66%), Gaps = 7/441 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ + +DE + E + +I RAL+QADV +LV ++ I+K
Sbjct: 1 MALEKLGKALNSALKKLARSRTVDEATIKEVVRDIQRALIQADVNVRLVLQLTKTIEKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ AG +K+ I Q ++ EL K L KP K KP+V++ VG+QGSGKTT+
Sbjct: 61 LEEEPPAGVSKKEHIIQIVYEELTKFLGKEAKP--LEIKEKPTVLLTVGIQGSGKTTSVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + QK+G+K +VC+DT+R GA+ QLKQ I G E D V++A EGV+ F
Sbjct: 119 KLARHLQKRGYKVGVVCSDTWRPGAYYQLKQLLEPYGIEVAGDPEEKDAVKLAREGVKYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+++ D+IIVD++GRHK+E L EEMRQ+SEA P VI V+D +IGQ A++QA AFK++
Sbjct: 179 REKGVDVIIVDSAGRHKEEKGLIEEMRQISEAIKPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLGMGD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGERIDDLEAFDPKRFVSRLLGMGD 298
Query: 300 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
G ++K+ E+ + + E L+K +G F L+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 299 IEGLLEKLEELQKQQEFKEEDLEKFLKGKFNLKDMYAQLEAMQKMGPLKQILQMIPGLGY 358
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
L P K + K+KRY +MDSMT EEL+ +P+++N SRI RIARGSG EV E+
Sbjct: 359 SL-PDDAVKVGEEKLKRYRVIMDSMTEEELE--HPEIINYSRIKRIARGSGTSTAEVREL 415
Query: 419 LEEYKRLAKIWSKMKGLKIPK 439
L +Y ++ K++ M K+ K
Sbjct: 416 LNQYNQMKKMFKSMDKRKLAK 436
>gi|253741984|gb|EES98841.1| SRP GTPase [Giardia intestinalis ATCC 50581]
Length = 530
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/503 (41%), Positives = 312/503 (62%), Gaps = 26/503 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-KI 59
MVL +LG S+ I + + + + +N ++E L ADV + + M+ ++ KI
Sbjct: 1 MVLNELGSSVLNVITKFAKTRLTTNEAVNALVDEFIGVLEAADVPTRTLEPMRKSMTTKI 60
Query: 60 VNLDDLAAGH-NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTC 118
+ + G N ++++Q+ + EL ML P +P F P + + +VIMFVGLQG+GKTTTC
Sbjct: 61 LGDPAIMEGRANTQQVVQRIVVQELVSMLSPDRPPFRPVRNRANVIMFVGLQGAGKTTTC 120
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
K+ Y+++KGW+ LVC DTFR GAFDQLKQN T K+PFYGSY+E DPV+IA +GV+
Sbjct: 121 VKFGAYYKRKGWRVGLVCCDTFRTGAFDQLKQNCTAVKLPFYGSYSEKDPVQIAQDGVKH 180
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
F N +LII+DTSGRH+QE ALF EM+ + A P +FV+DSSIGQAA++QA AF
Sbjct: 181 FLSLNFELIILDTSGRHRQEEALFTEMKLIDNAVQPHDHVFVLDSSIGQAAYEQADAFSN 240
Query: 239 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 298
+V +G+VI+TK+DGH++GGGAL+AV+ATK+P++F+GTGE +++ E FD FVS +LG G
Sbjct: 241 AVEIGSVILTKLDGHSRGGGALAAVSATKAPIVFLGTGEKIEDLEFFDPSRFVSVMLGYG 300
Query: 299 DWSGFMDKIHEVVP---MDQQPEL--LQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 353
D G +HE + +D + + + ++ +F+ R EQ +N+ KMGP+ ++ SM+
Sbjct: 301 DIMG----LHEAMQGGNIDHKAHIQTVVRMLHNHFSFRDFKEQLKNLNKMGPLQKIASMV 356
Query: 354 PGFSSELMPKGREKESQAK-IKRYMTMMDSMTNEELDSSNPKLMND------SRIMRIAR 406
PGFS + +S+ K ++ + T+MDSM +ELDS+ L + SR RIA
Sbjct: 357 PGFSQMAASGDLDMDSEVKQLQIFNTIMDSMAAKELDSNTEILKKEGEDKFRSRAKRIAI 416
Query: 407 GSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQ 466
GSG V EV+E ++ ++++ KM G K+ G + L +MN +
Sbjct: 417 GSGYTVEEVLEFFDKAAEFSEMFGKM-GRKLKSPGALQELFSSMNMNPQMMQ------QM 469
Query: 467 IGGVGGLQNLMKQMGSTKDMMGM 489
+ G+G LQN M +M MGM
Sbjct: 470 MSGLGSLQN-MPEMADLAKSMGM 491
>gi|12230630|sp|O59307.3|SRP54_PYRHO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
Length = 443
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/456 (44%), Positives = 291/456 (63%), Gaps = 21/456 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++S A+++++ A +DE ++ E + +I RALLQADV +LV ++ I++
Sbjct: 1 MVLDSLGRALSNALKKIARAGSVDEALVKEVVRDIQRALLQADVNVRLVLKLTKEIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL K L KP K KP+V++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTVLLTVGVQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QLKQ I +G E D V++A EGVE F
Sbjct: 119 KLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEKDAVKLAKEGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + DLIIVDT+GRHK+E L EEMR +SE P VI V+D +IGQ A++QA AFK++
Sbjct: 179 KTRDVDLIIVDTAGRHKEEKDLIEEMRMISEEIRPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+D AKGGGALSAVAAT +P+ FIG GE +D+ E FD FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPARFVSRLLGLGD 298
Query: 300 WSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS- 357
G ++K E+ ++ E + + G FTL+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 299 IQGLLEKFKELEKEVEFTEEDIDRFLRGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLGY 358
Query: 358 ---SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
EL+ G E +++++ +MDSMT EEL NP+++N SRI RIARGSG +++
Sbjct: 359 SLPDELISVGEE-----RLRKFKVIMDSMTEEEL--MNPEIINYSRIKRIARGSGTSIKD 411
Query: 415 VMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNM 450
V E+L +Y ++ K + M K ++S L+R
Sbjct: 412 VKELLTQYNQMKKFFKSM------NKRQLSRLARRF 441
>gi|14591457|ref|NP_143537.1| signal recognition particle protein Srp54 [Pyrococcus horikoshii
OT3]
gi|3258124|dbj|BAA30807.1| 445aa long hypothetical signal recognition particle protein
[Pyrococcus horikoshii OT3]
Length = 445
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/455 (44%), Positives = 291/455 (63%), Gaps = 21/455 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++S A+++++ A +DE ++ E + +I RALLQADV +LV ++ I++
Sbjct: 3 MVLDSLGRALSNALKKIARAGSVDEALVKEVVRDIQRALLQADVNVRLVLKLTKEIQRRA 62
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL K L KP K KP+V++ VG+QGSGKTTT
Sbjct: 63 LEEKPPAGISKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTVLLTVGVQGSGKTTTVA 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QLKQ I +G E D V++A EGVE F
Sbjct: 121 KLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEKDAVKLAKEGVEYF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + DLIIVDT+GRHK+E L EEMR +SE P VI V+D +IGQ A++QA AFK++
Sbjct: 181 KTRDVDLIIVDTAGRHKEEKDLIEEMRMISEEIRPHEVILVIDGTIGQQAYNQALAFKEA 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+D AKGGGALSAVAAT +P+ FIG GE +D+ E FD FVSRLLG+GD
Sbjct: 241 TPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPARFVSRLLGLGD 300
Query: 300 WSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS- 357
G ++K E+ ++ E + + G FTL+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 301 IQGLLEKFKELEKEVEFTEEDIDRFLRGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLGY 360
Query: 358 ---SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
EL+ G E +++++ +MDSMT EEL NP+++N SRI RIARGSG +++
Sbjct: 361 SLPDELISVGEE-----RLRKFKVIMDSMTEEEL--MNPEIINYSRIKRIARGSGTSIKD 413
Query: 415 VMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRN 449
V E+L +Y ++ K + M K ++S L+R
Sbjct: 414 VKELLTQYNQMKKFFKSM------NKRQLSRLARR 442
>gi|256810320|ref|YP_003127689.1| signal recognition particle protein Srp54 [Methanocaldococcus
fervens AG86]
gi|256793520|gb|ACV24189.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus fervens AG86]
Length = 451
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/436 (45%), Positives = 287/436 (65%), Gaps = 12/436 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++++A+ ++ A +D+K++ E + +I RAL+QADV KLV +M I++
Sbjct: 1 MLDKLGENLNKALNKLKAAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ G +K+ I + ++ EL K+L + K +PKK +VI+ VG+QGSGKTTT
Sbjct: 61 KEETPKGLSKKEHIIKIVYEELVKLLGEEAKKLELSPKK--QNVILLVGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T++ PV I EG+E
Sbjct: 119 KLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPLYGDETKTKSPVEIVKEGMEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FKK D++I+DT+GRHK+E L EEM+Q+ E TNPD +I V+D +IGQ A QA+AFK+
Sbjct: 179 FKK--ADVLIIDTAGRHKEERGLLEEMKQIKEVTNPDEIILVIDGTIGQQAGIQAKAFKE 236
Query: 239 SV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V +G++IVTK+DG AKGGGALSAVA T +P+ FIG GE +D+ E FD K F+SRLLGM
Sbjct: 237 AVGEIGSIIVTKLDGSAKGGGALSAVAETGAPIKFIGIGEGIDDLEPFDPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
GD ++K ++V ++ E + + +G FTL + Q + I MG + ++ SM+PGF
Sbjct: 297 GDLDSLLEKAEDMVD-EKTEESIDAIMKGKFTLNELLTQLEAIENMGSMKKILSMIPGFG 355
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
MPK ++AKIK+Y ++ SMT EE NPK++ SRI RIARGSG EV E
Sbjct: 356 GA-MPKELSNLTEAKIKKYKVIISSMTKEE--RENPKIIKASRIRRIARGSGTTENEVRE 412
Query: 418 MLEEYKRLAKIWSKMK 433
+L+ Y+ K++
Sbjct: 413 VLKYYETTKNAIDKLR 428
>gi|336121936|ref|YP_004576711.1| Signal recognition 54 kDa protein [Methanothermococcus okinawensis
IH1]
gi|334856457|gb|AEH06933.1| Signal recognition 54 kDa protein [Methanothermococcus okinawensis
IH1]
Length = 456
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 192/445 (43%), Positives = 292/445 (65%), Gaps = 12/445 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
++L +LG +IS A+ ++ NAT +D+K++ E + +I +AL+QADV KLV +M I+K
Sbjct: 6 IMLDKLGQNISSALNKIKNATFVDKKLIKEVIKDIQKALIQADVNVKLVFKMSKEIEKRA 65
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTC 118
+D+ G +K+ I + ++ EL K+L + K PKK ++I+ VG+QGSGKTT+
Sbjct: 66 INEDIPKGLSKKEHIIKIVYEELVKLLGEEGQKLELNPKK--QNIILLVGIQGSGKTTSA 123
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVE 177
K A Y QK+G KP L+ AD +R A+ QLKQ A K +P YG T++ P+ IA EG++
Sbjct: 124 AKLARYIQKRGLKPGLIAADIYRPAAYQQLKQLAEKIHVPLYGDETKTKTPMEIAKEGIK 183
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
KK D++I+DT+GRHK+E L EEM+Q+ + NPD +I V+D ++GQ A +QA+AFK
Sbjct: 184 NLKK--MDVLIIDTAGRHKEETGLLEEMKQIKDVVNPDEIILVIDGTLGQQAKNQAKAFK 241
Query: 238 QSV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
+V +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE++D+ E FD F+SRLLG
Sbjct: 242 DAVGEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGENVDDLEPFDPNKFISRLLG 301
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
MGD ++K +++ D + E + + +G FTL +Y Q + I KMGP+ Q+ SM+PGF
Sbjct: 302 MGDLEALLEKTEDLIDEDTE-ESIDAILKGKFTLNELYSQLEAISKMGPMKQIMSMIPGF 360
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 416
+ PK ++ K+K+Y +MDSMT EE NP+++ SR+ RI+RG+G + E+
Sbjct: 361 GGAI-PKDAANLTEQKLKKYKIIMDSMTKEE--KENPEIIKTSRMKRISRGAGVKQEEIK 417
Query: 417 EMLEEYKRLAKIWSKMKGLKIPKKG 441
E+L+ Y + +K K+ K G
Sbjct: 418 ELLKYYATTKNAFQNLKRGKMLKMG 442
>gi|154290868|ref|XP_001546023.1| hypothetical protein BC1G_15366 [Botryotinia fuckeliana B05.10]
Length = 311
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 231/310 (74%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + + EI ALL+ADV KLV ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSSNLDEKAFDGMIKEICSALLEADVNVKLVGNLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +LA NK+++IQ+A+++EL K++DP F PKKGK ++IMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELAPAVNKKKVIQKAVYDELVKLVDPHAEPFKPKKGKANIIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV+ FK
Sbjct: 121 LARWYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE ALF+EM + A PD + VMD+SIGQ A Q++AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEDALFQEMVDIQTAVKPDQTVMVMDASIGQQAEAQSKAFKETA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IFIGTGEHM + E F FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGHASGGGAISAVAATHTPIIFIGTGEHMLDLEKFAPTQFVSKLLGMGDM 300
Query: 301 SGFMDKIHEV 310
G M+ + +
Sbjct: 301 QGLMEHVQSL 310
>gi|347835299|emb|CCD49871.1| similar to signal recognition particle 54 kda protein [Botryotinia
fuckeliana]
Length = 309
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 175/308 (56%), Positives = 230/308 (74%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + + EI ALL+ADV KLV ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSSNLDEKAFDGMIKEICSALLEADVNVKLVGNLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +LA NK+++IQ+A+++EL K++DP F PKKGK ++IMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELAPAVNKKKVIQKAVYDELVKLVDPHAEPFKPKKGKANIIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV+ FK
Sbjct: 121 LARWYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE ALF+EM + A PD + VMD+SIGQ A Q++AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEDALFQEMVDIQTAVKPDQTVMVMDASIGQQAEAQSKAFKETA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IFIGTGEHM + E F FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGHASGGGAISAVAATHTPIIFIGTGEHMLDLEKFAPTQFVSKLLGMGDM 300
Query: 301 SGFMDKIH 308
G M+ +
Sbjct: 301 QGLMEHVQ 308
>gi|14520695|ref|NP_126170.1| signal recognition particle protein Srp54 [Pyrococcus abyssi GE5]
gi|12230641|sp|Q9V1E8.1|SRP54_PYRAB RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|5457911|emb|CAB49401.1| srp54 signal recognition particle, subunit SRP54 [Pyrococcus abyssi
GE5]
gi|380741228|tpe|CCE69862.1| TPA: signal recognition particle protein Srp54 [Pyrococcus abyssi
GE5]
Length = 443
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 194/434 (44%), Positives = 283/434 (65%), Gaps = 7/434 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++S A+++++ A +DE ++ E + +I RAL+QADV +LV ++ I++
Sbjct: 1 MVLDSLGKALSNALKKIARAGSVDEALVKEVVRDIQRALIQADVNVRLVLKLTKEIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL K L KP K KP++++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTILLMVGVQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + QK+G+K +VC+DT+R GA+ QLKQ I +G E D +++A EGVE F
Sbjct: 119 KLARHFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEKDAIKLAKEGVEHF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + DLIIVDT+GRHK+E L EEMR +S P VI V+D +IGQ A++QA AFK++
Sbjct: 179 KAKGVDLIIVDTAGRHKEEKDLIEEMRMISNEIKPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+D AKGGGALSAVAAT +P+ FIGTGE +D+ E FD FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGTGEKIDDLEPFDPARFVSRLLGLGD 298
Query: 300 WSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
G ++K E+ ++ E L++ +G FTL+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 299 IQGLLEKFKELEKEVEFTEEDLERFLKGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLGY 358
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
L P + +++++ +MDSMT EEL NP ++N SRI RIARGSG V++V E+
Sbjct: 359 SL-PDEVISVGEERLRKFKVIMDSMTEEEL--MNPDIINYSRIKRIARGSGTSVKDVKEL 415
Query: 419 LEEYKRLAKIWSKM 432
L +Y ++ K + M
Sbjct: 416 LNQYNQMKKFFKSM 429
>gi|289192492|ref|YP_003458433.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus sp. FS406-22]
gi|288938942|gb|ADC69697.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus sp. FS406-22]
Length = 451
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 196/436 (44%), Positives = 284/436 (65%), Gaps = 12/436 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++++A+ ++ A +D+K++ E + +I RAL+QADV KLV +M I++
Sbjct: 1 MLDKLGENLNKALNKLKTAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + ++ EL K+L + K PKK ++I+ VG+QGSGKTTT
Sbjct: 61 EEKTPKGLSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QNIILLVGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + PV I EG+E
Sbjct: 119 KLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGMEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FKK D++I+DT+GRHK+E L EEM+Q+ E TNPD +I V+D +IGQ A QA+AFK+
Sbjct: 179 FKK--ADVLIIDTAGRHKEEKGLLEEMKQIKEITNPDEIILVIDGTIGQQAGIQAKAFKE 236
Query: 239 SV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V +G++IVTK+DG AKGGGALSAVA TK+P+ FIG GE +D+ E FD K F+SRLLGM
Sbjct: 237 AVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
GD ++K ++V ++ E + + G FTL + Q + I MG + ++ SM+PGF
Sbjct: 297 GDLESLLEKAEDMVD-EKTEESIDAIMRGKFTLNELMTQLEAIENMGSMKKILSMIPGFG 355
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
MPK ++AKIK+Y ++ SMT EE NPK++ SRI RIARGSG +V E
Sbjct: 356 GA-MPKELSHLTEAKIKKYKVIISSMTKEE--RENPKIIKASRIRRIARGSGTTENDVRE 412
Query: 418 MLEEYKRLAKIWSKMK 433
+L+ Y+ K++
Sbjct: 413 VLKYYETTKNAIDKLR 428
>gi|322802263|gb|EFZ22659.1| hypothetical protein SINV_03515 [Solenopsis invicta]
Length = 275
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 169/271 (62%), Positives = 221/271 (81%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N+++++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRQVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +D+A G NKRR+IQ A+F EL K++DPG ++ P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFEDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPVKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVAIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAVQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVI 271
+VG++I+TK+DGHAKGGGALSA+ S +
Sbjct: 241 NVGSIIITKLDGHAKGGGALSALTCEFSDFV 271
>gi|15668272|ref|NP_247065.1| signal recognition particle protein Srp54 [Methanocaldococcus
jannaschii DSM 2661]
gi|2500886|sp|Q57565.1|SRP54_METJA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|1590878|gb|AAB98081.1| signal recognition particle, subunit SRP54 [Methanocaldococcus
jannaschii DSM 2661]
Length = 451
Score = 367 bits (941), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 197/436 (45%), Positives = 283/436 (64%), Gaps = 12/436 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++++A+ ++ A +D+K++ E + +I RAL+QADV KLV +M I++
Sbjct: 1 MLDKLGENLNKALNKLKAAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + ++ EL K+L + K PKK +VI+ VG+QGSGKTTT
Sbjct: 61 EEKTPKGLSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QNVILLVGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + PV I EG+E
Sbjct: 119 KLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGMEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FKK D++I+DT+GRHK+E L EEM+Q+ E TNPD +I V+D +IGQ A QA+AFK+
Sbjct: 179 FKK--ADVLIIDTAGRHKEEKGLLEEMKQIKEITNPDEIILVIDGTIGQQAGIQAKAFKE 236
Query: 239 SV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V +G++IVTK+DG AKGGGALSAVA TK+P+ FIG GE +D+ E FD K F+SRLLGM
Sbjct: 237 AVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
GD ++K ++V ++ E + + G FTL + Q + I MG + ++ SM+PGF
Sbjct: 297 GDLESLLEKAEDMVD-EKTEESIDAIMRGKFTLNELMTQLEAIENMGSMKKILSMIPGFG 355
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
MPK ++AKIK+Y ++ SMT EE NPK++ SRI RIARGSG +V E
Sbjct: 356 GA-MPKELSHLTEAKIKKYKVIISSMTKEE--RENPKIIKASRIRRIARGSGTTENDVRE 412
Query: 418 MLEEYKRLAKIWSKMK 433
+L Y+ K++
Sbjct: 413 VLRYYETTKNAIDKLR 428
>gi|323714481|pdb|3NDB|B Chain B, Crystal Structure Of A Signal Sequence Bound To The Signal
Recognition Particle
Length = 454
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/433 (45%), Positives = 281/433 (64%), Gaps = 12/433 (2%)
Query: 5 QLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDD 64
+LG ++++A+ ++ A +D+K++ E + +I RAL+QADV KLV +M I++ +
Sbjct: 3 KLGENLNKALNKLKAAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRALEEK 62
Query: 65 LAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYA 122
G +K+ I + ++ EL K+L + K PKK +VI+ VG+QGSGKTTT K A
Sbjct: 63 TPKGLSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QNVILLVGIQGSGKTTTAAKLA 120
Query: 123 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVETFKK 181
Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + PV I EG+E FKK
Sbjct: 121 RYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGMEKFKK 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV- 240
D++I+DT+GRHK+E L EEM+Q+ E TNPD +I V+D +IGQ A QA+AFK++V
Sbjct: 181 --ADVLIIDTAGRHKEEKGLLEEMKQIKEITNPDEIILVIDGTIGQQAGIQAKAFKEAVG 238
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++IVTK+DG AKGGGALSAVA TK+P+ FIG GE +D+ E FD K F+SRLLGMGD
Sbjct: 239 EIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLGMGDL 298
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
++K ++V ++ E + + G FTL + Q + I MG + ++ SM+PGF
Sbjct: 299 ESLLEKAEDMVD-EKTEESIDAIMRGKFTLNELMTQLEAIENMGSMKKILSMIPGFGG-A 356
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPK ++AKIK+Y ++ SMT EE NPK++ SRI RIARGSG +V E+L
Sbjct: 357 MPKELSHLTEAKIKKYKVIISSMTKEE--RENPKIIKASRIRRIARGSGTTENDVREVLR 414
Query: 421 EYKRLAKIWSKMK 433
Y+ K++
Sbjct: 415 YYETTKNAIDKLR 427
>gi|332157931|ref|YP_004423210.1| signal recognition particle protein Srp54 [Pyrococcus sp. NA2]
gi|331033394|gb|AEC51206.1| signal recognition particle protein Srp54 [Pyrococcus sp. NA2]
Length = 443
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 200/455 (43%), Positives = 295/455 (64%), Gaps = 21/455 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++S A+++++ A +DE ++ E + +I RAL+QADV +LV + I++
Sbjct: 1 MVLDTLGKALSNALKKIARAGSVDEALVKEVVRDIQRALIQADVNVRLVLNLTREIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +++ I + ++ EL K L +P + KP++++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISRKEHIIKIVYEELTKFLGTEARP--IEIREKPTILLMVGVQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QLKQ I +G E D +++A EGV+ F
Sbjct: 119 KLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPQEKDAIKLAREGVKHF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K++ DLIIVDT+GRHK+E L EEMRQ+SEA NP VI V+D +IGQ A++QA AFK++
Sbjct: 179 KEKGVDLIIVDTAGRHKEEKNLIEEMRQISEAINPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+D AKGGGALSAVAAT +P+ FIG GE +D+ E FD FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGVGEKIDDIEPFDPARFVSRLLGLGD 298
Query: 300 WSGFMDKIHEVVPMDQQPEL-LQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS- 357
G ++K E+ + E L++ G FTL+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 299 IQGLLEKFKEIEKEIEIKEEDLERFLRGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLGY 358
Query: 358 ---SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
EL+ G E +++++ +MDSMT EEL NP+++N SRI RIARGSG V++
Sbjct: 359 SLPDELISVGEE-----RLRKFKVIMDSMTEEEL--MNPEIINYSRIKRIARGSGTSVKD 411
Query: 415 VMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRN 449
V E+L +Y+++ K + M K ++S L+R
Sbjct: 412 VKELLNQYRQMKKFFKSM------NKRQLSRLARR 440
>gi|123492715|ref|XP_001326126.1| SRP54-type protein [Trichomonas vaginalis G3]
gi|121909036|gb|EAY13903.1| SRP54-type protein, putative [Trichomonas vaginalis G3]
Length = 494
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 191/488 (39%), Positives = 310/488 (63%), Gaps = 14/488 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG + +I+++S + IDEKV + E+ ++L+ AD ++V + +K +N
Sbjct: 1 MLQDLGEKLMGSIKKLSESKTIDEKVYVTFMAEVAKSLIAADCSKEIVFDFSRRLKDSIN 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + RR+I++A+FNEL K++DPG P++ P+K ++ M VGLQG+GKTTT TK
Sbjct: 61 FKEIPPGLSIRRVIEKAVFNELVKLIDPGIPAYKPQKKMLNIFMMVGLQGAGKTTTVTKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++++ W+ ++ ADTFRAGA +QL QNA A+IP++ +TE DPV+ A++G+E F+K
Sbjct: 121 ANFYKRRNWRTGVIAADTFRAGAREQLMQNAQTARIPYFVDFTEQDPVQAALKGIEKFRK 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ +++I+DTSGRH QE ALF EM+ ++ A NP +IFVMD +IGQAA+DQA FK +V
Sbjct: 181 DKYEIVIIDTSGRHMQEEALFAEMKALAAAVNPHEIIFVMDGTIGQAAYDQALGFKNAVG 240
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+D +AKGGGALSAVAAT SP+ FIG+GE + E FD FVSRLLG+ D
Sbjct: 241 VGSIIITKLDSNAKGGGALSAVAATNSPISFIGSGEQFTDLEWFDPNSFVSRLLGIQD-P 299
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
G + + E + + E+ + + +G F+ R +Y Q++ +L +G + + + +
Sbjct: 300 GVIQRTLEEIDKEANKEIAEHIQKGQFSFRDLYNQYKMVLDVGNFNSMLDSIT-IAQGIK 358
Query: 362 P--KGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM--NDSRIMRIARGSGRQVREVME 417
P K + ++ +KR + ++D+M+ E++ NP L ++SRI R+ GSG V
Sbjct: 359 PGMKNDPEHTKDTVKRILVVIDAMSTSEIE--NPLLFKNDESRIARLCSGSGMPPPFVQY 416
Query: 418 MLEEYKRLAKIWSKM--KGLKIPKKGEMS--ALSRNMNAQ--HMSKVLPQGMLKQIGGVG 471
++ E +R ++ +M K L + + E A R Q M+K + + ML+ +GG+
Sbjct: 417 VINEQRRWETMFKRMDKKTLALMSQTEQPNFANERQFKEQVMKMAKSMDKEMLRSVGGIE 476
Query: 472 GLQNLMKQ 479
GL+ M+Q
Sbjct: 477 GLEASMRQ 484
>gi|158430970|pdb|2V3C|C Chain C, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna Complex
Of M. Jannaschii
gi|158430971|pdb|2V3C|D Chain D, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna Complex
Of M. Jannaschii
Length = 432
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/422 (46%), Positives = 277/422 (65%), Gaps = 12/422 (2%)
Query: 5 QLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDD 64
+LG ++++A+ ++ A +D+K++ E + +I RAL+QADV KLV +M I++ +
Sbjct: 3 KLGENLNKALNKLKAAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRALEEK 62
Query: 65 LAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYA 122
G +K+ I + ++ EL K+L + K PKK +VI+ VG+QGSGKTTT K A
Sbjct: 63 TPKGLSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QNVILLVGIQGSGKTTTAAKLA 120
Query: 123 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVETFKK 181
Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + PV I EG+E FKK
Sbjct: 121 RYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGMEKFKK 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV- 240
D++I+DT+GRHK+E L EEM+Q+ E TNPD +I V+D +IGQ A QA+AFK++V
Sbjct: 181 --ADVLIIDTAGRHKEEKGLLEEMKQIKEITNPDEIILVIDGTIGQQAGIQAKAFKEAVG 238
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++IVTK+DG AKGGGALSAVA TK+P+ FIG GE +D+ E FD K F+SRLLGMGD
Sbjct: 239 EIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLGMGDL 298
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
++K ++V ++ E + + G FTL + Q + I MG + ++ SM+PGF
Sbjct: 299 ESLLEKAEDMVD-EKTEESIDAIMRGKFTLNELMTQLEAIENMGSMKKILSMIPGFGG-A 356
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPK ++AKIK+Y ++ SMT EE NPK++ SRI RIARGSG +V E+L
Sbjct: 357 MPKELSHLTEAKIKKYKVIISSMTKEE--RENPKIIKASRIRRIARGSGTTENDVREVLR 414
Query: 421 EY 422
Y
Sbjct: 415 YY 416
>gi|337283719|ref|YP_004623193.1| signal recognition particle protein Srp54 [Pyrococcus yayanosii
CH1]
gi|334899653|gb|AEH23921.1| signal recognition particle protein Srp54 [Pyrococcus yayanosii
CH1]
Length = 443
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 193/434 (44%), Positives = 288/434 (66%), Gaps = 7/434 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L LG ++S A+++++ A +DE ++ E + +I RAL+QADV +LV ++ I++
Sbjct: 1 MALDALGRALSNALKKIARAGTVDETLVKEVVRDIQRALIQADVNVRLVLKLTKEIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +++ I + ++ EL K+L KP K KP +++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISRKEHIIKIVYEELSKLLGSEAKP--IEIKEKPMILLMVGIQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + QK+G+K +VC+DT+R GA+ QL+Q + +G+ E D V++A EGVE F
Sbjct: 119 KLARHFQKRGYKVGVVCSDTWRPGAYHQLRQLLDPYHVEVFGNPEEKDAVKLAREGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+ + D+IIVDT+GRHK+E L EEMRQ+SEA P VI V+D +IGQ A+ QA AFK++
Sbjct: 179 RGKGVDIIIVDTAGRHKEEKGLIEEMRQISEAIRPHEVILVIDGTIGQQAYSQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPKRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEVVPMDQQPEL-LQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
G ++K E+ + E +++ +G FTL+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 299 IQGLLEKFEELEKEVEFSEKDVERFLKGKFTLKDMYAQLEAMQKMGPLKQILRMIPGLGY 358
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
L P + ++K++ +MDSMT EEL+ NP ++N SR+ RIARGSG V++V E+
Sbjct: 359 SL-PDEVISVGEERLKKFRVIMDSMTEEELE--NPGIINYSRMKRIARGSGTSVKDVKEL 415
Query: 419 LEEYKRLAKIWSKM 432
LE+YK++ + + M
Sbjct: 416 LEQYKQMKRFFKTM 429
>gi|261402637|ref|YP_003246861.1| signal recognition particle protein Srp54 [Methanocaldococcus
vulcanius M7]
gi|261369630|gb|ACX72379.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus vulcanius M7]
Length = 450
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 194/436 (44%), Positives = 282/436 (64%), Gaps = 13/436 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++++A+ ++ A +D K++ E + +I RAL+QADV KLV +M I++
Sbjct: 1 MLDKLGENLNKALNKLKAAAFVDRKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + ++ EL K+L + K PKK +VI+ +G+QGSGKTTT
Sbjct: 61 EEKTPKGLSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QNVILLIGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + DPV I EG++
Sbjct: 119 KLARYVQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPLYGDETRTKDPVEIVKEGMQK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FKK D++I+DT+GRHK+E L EEM+Q+ E TNPD +I V+D +IGQ A QA+AFK
Sbjct: 179 FKK--ADVLIIDTAGRHKEEKGLLEEMKQIKEITNPDEIILVIDGTIGQQARIQAKAFKD 236
Query: 239 SV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V +G++IVTK+DG AKGGGALSAVA T++P+ FIG GE +D+ E FD K F+SRLLGM
Sbjct: 237 AVGEIGSIIVTKLDGSAKGGGALSAVAETQAPIKFIGVGEGIDDLEPFDPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
GD ++K ++V ++ E + + +G FTL + Q + I MG + ++ SM+PG
Sbjct: 297 GDLDSLLEKAEDMVD-EKTEESIDAIMKGKFTLNELMTQLEAIENMGSMKKIMSMIPGLG 355
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
MPK +++KIKRY ++ SMT EE NPK++ SRI RIARGSG +V E
Sbjct: 356 G--MPKELSHLTESKIKRYKVIISSMTKEE--RENPKIIKASRIKRIARGSGTSESDVRE 411
Query: 418 MLEEYKRLAKIWSKMK 433
+L Y+ K++
Sbjct: 412 VLRYYETTKNAIDKLR 427
>gi|297619646|ref|YP_003707751.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Methanococcus voltae A3]
gi|297378623|gb|ADI36778.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanococcus voltae A3]
Length = 450
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 189/444 (42%), Positives = 290/444 (65%), Gaps = 12/444 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG +IS A+ ++ +AT++D+K++ E + +I +AL+Q+DV KLV +M +I+K
Sbjct: 1 MLDKLGQNISTALNKIKSATLVDKKLIKEVIKDIQKALIQSDVNVKLVLKMSKDIEKKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ G K+ I Q ++NEL +++ +P K P K S+I+ VG+QGSGKTT+
Sbjct: 61 EENPPKGLTKKEHIIQIVYNELVQLIGNEPQKLDLDP--SKKSIILLVGIQGSGKTTSSA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVET 178
K A QK+G KPAL+ AD +R A+ QL+Q A K +P YG T + P+ IA +G+
Sbjct: 119 KLARLIQKRGLKPALIAADVYRPAAYKQLQQLAEKINVPLYGDETRTKTPIEIAKDGLNK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
KK D+ I+DT+GRHK+E+ L EM+++ + NP ++ V+D ++GQ A +QA+AFK
Sbjct: 179 LKK--ADVFIIDTAGRHKEESGLLTEMKELKDELNPKEIVLVIDGTLGQQAKNQAKAFKD 236
Query: 239 SV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D+ E F+ K F+SRLLGM
Sbjct: 237 AVEDIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDDLETFEPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
GD ++K ++V + E ++ + +G FTL +Y Q + I KMGP+ Q+ SM+PG
Sbjct: 297 GDLDSLLEKTDDIVE-EANEEDIEAILKGKFTLVELYSQLETISKMGPMKQILSMIPGMG 355
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
+ MPK ++ K+KRY +MDSMT EE NP+L+ SR+ RIARG+G + EV E
Sbjct: 356 AS-MPKEAASLTEQKLKRYKILMDSMTEEE--KENPELIKTSRMQRIARGAGAKQEEVKE 412
Query: 418 MLEEYKRLAKIWSKMKGLKIPKKG 441
+L+ Y+ +S +K K+ K G
Sbjct: 413 LLKYYQTTKNAFSNLKRGKMLKMG 436
>gi|312137225|ref|YP_004004562.1| signal recognition particle subunit ffh/srp54 (srp54)
[Methanothermus fervidus DSM 2088]
gi|311224944|gb|ADP77800.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanothermus fervidus DSM 2088]
Length = 449
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 190/428 (44%), Positives = 279/428 (65%), Gaps = 10/428 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG + ++I++++ I+DEKV+ E + ++ RAL+QADV KLV ++ +I+K
Sbjct: 7 MLGKLGEKLRKSIKKLAKMPIVDEKVVKEVIKDLQRALIQADVNVKLVFKLSKSIEKRAL 66
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPK-KGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ EL K+L GK S+ K KP I+FVGLQGSGKTTT K
Sbjct: 67 KEEPPKGITPKEHVIKIVYEELTKLL--GKKSYKLKIDKKPYKILFVGLQGSGKTTTVAK 124
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+Y + KG+ A+VC DT+R A+DQLKQ + +P YG E +P+R+A EG+ FK
Sbjct: 125 LAHYLRLKGYNSAVVCTDTWRTAAYDQLKQLTEEINVPMYGDPNEDNPIRLAKEGLNKFK 184
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
N D+I+ DT+GRHK E L +EM +S+ NPD +I V+D +IGQ A QA+AF + V
Sbjct: 185 --NYDVILFDTAGRHKNEKELLDEMEMLSKEINPDEIILVIDGTIGQQAKSQAKAFSERV 242
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++IVTK+DG AKGGGALSAV+ +P+ FIGTGE +D+ E FD F+SRLLGMGD
Sbjct: 243 KIGSIIVTKLDGSAKGGGALSAVSEVGAPIKFIGTGEKIDDLEEFDPARFMSRLLGMGDI 302
Query: 301 SGFMDKIHEVV-PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K VV D+ E + + G FTL+ + QF+ + KMGP+ Q+ +MLP +
Sbjct: 303 KSLIEKFERVVEEEDKISETVDTMLSGKFTLKDLKTQFETMKKMGPLKQILNMLPLAGN- 361
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
+PK K ++ KIK+Y +MDSMT EEL+ NP+++ SR+ RIARG+G + +V E+L
Sbjct: 362 -IPKNFSKITEDKIKKYCVIMDSMTEEELE--NPRIIKYSRVKRIARGAGVRNEDVRELL 418
Query: 420 EEYKRLAK 427
YK K
Sbjct: 419 RYYKTTKK 426
>gi|150402723|ref|YP_001330017.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis C7]
gi|166222336|sp|A6VHE0.1|SRP54_METM7 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|150033753|gb|ABR65866.1| GTP-binding signal recognition particle SRP54 G- domain
[Methanococcus maripaludis C7]
Length = 450
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 192/453 (42%), Positives = 288/453 (63%), Gaps = 11/453 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSEALNKIKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +K+ I + +++EL +L K SVI+ +G+QGSGKTT+ K
Sbjct: 61 EEAPPKGLSKKEHIVKIVYDELVNLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFK 180
A Y QKKG +P L+ AD +R A+ QLKQ + K +P +G T + PV I EG+E K
Sbjct: 121 ARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEKLK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+II+DT+GRHK+E L EMR++ + TNP +I V+D ++GQ A +QA+AFK+SV
Sbjct: 181 K--VDVIIIDTAGRHKEEEGLLAEMREMKDLTNPTEIILVIDGTLGQQAKNQAKAFKESV 238
Query: 241 S-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
S +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SR+LGMGD
Sbjct: 239 SEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGMGD 298
Query: 300 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
++K ++ MD+ E + + +G FTL +Y Q + I KMGP+ Q+ SM+PG
Sbjct: 299 LDSLLEKTEDI--MDESTEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMGG 356
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
L PK + ++ K+KRY MMDSMT EE NP+L+ SR+ RIA+G+G + E+ ++
Sbjct: 357 NL-PKEAAQLTEDKLKRYKIMMDSMTMEE--KENPELIKASRLQRIAKGAGVKQEEIKDL 413
Query: 419 LEEYKRLAKIWSKMKGLKIPK-KGEMSALSRNM 450
L+ Y + +K K+PK G+M + R +
Sbjct: 414 LKYYSTTKNAFGNLKRGKMPKMGGQMGQIMRQL 446
>gi|159905503|ref|YP_001549165.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis C6]
gi|238686963|sp|A9A9B0.1|SRP54_METM6 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|159886996|gb|ABX01933.1| GTP-binding signal recognition particle SRP54 G- domain
[Methanococcus maripaludis C6]
Length = 450
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 192/453 (42%), Positives = 288/453 (63%), Gaps = 11/453 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSEALNKIKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +K+ I + +++EL K+L K SVI+ +G+QGSGKTT+ K
Sbjct: 61 EEAPPKGLSKKEHIVKIVYDELVKLLGETIQKLELDASKKSVILLIGIQGSGKTTSAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFK 180
A Y QKKG +P L+ AD +R A+ QLKQ + K +P +G T + PV I EG+E K
Sbjct: 121 ARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVDITKEGMEKLK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+II+DT+GRHK+E L EM+++ + TNP+ +I V+D ++GQ A +QA+AFK SV
Sbjct: 181 K--VDVIIIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKDSV 238
Query: 241 S-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
S +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SR+LG GD
Sbjct: 239 SEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGFGD 298
Query: 300 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
++K ++ MD+ E + + +G FTL +Y Q + I KMGP+ Q+ SM+PG
Sbjct: 299 LDSLLEKTEDI--MDESAEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMGG 356
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
MPK + ++ K+KRY MMDSMT EE NP+L+ SR+ RIARG+G + E+ ++
Sbjct: 357 N-MPKEAAQLTEDKLKRYKIMMDSMTMEE--KENPELIKTSRLQRIARGAGVKPEEIKDL 413
Query: 419 LEEYKRLAKIWSKMKGLKIPK-KGEMSALSRNM 450
L+ Y + +K K+PK G+M + R +
Sbjct: 414 LKYYSTTKNAFGNLKRGKMPKMGGQMGQIMRQL 446
>gi|402466990|gb|EJW02377.1| signal recognition particle protein SRP54 [Edhazardia aedis USNM
41457]
Length = 466
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 186/445 (41%), Positives = 300/445 (67%), Gaps = 17/445 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L+ +G I+ ++ + + DE + N + E+ LL A+V KL+ ++ NIKK +
Sbjct: 1 MLSDVGRKITTSLNDLFSTQNTDETIEN-VIKEVCTQLLNANVSPKLLLTLRKNIKK--D 57
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++L G NK + Q I +E+ +LDPG KP KK ++++FVGLQG GKTTT K
Sbjct: 58 MENLPPGINKAKHCHQKIVSEIVNLLDPGTKPPELSKKS-VNIVLFVGLQGCGKTTTVCK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA ++QK+ +K +VCADTFRAGAFDQ+KQNA K K+P+YGS E DPV++A +GVE F
Sbjct: 117 YANFYQKQKFKVGIVCADTFRAGAFDQIKQNALKIKVPYYGS-EEKDPVKVARKGVEKFV 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E +LI++D+SGR+ QE LF+EM+Q+ A P ++FVMD+ IGQAA QA+ F +
Sbjct: 176 NEKFNLILIDSSGRNTQEKELFDEMQQIISAVTPTNIVFVMDAGIGQAAESQAKGFSDAT 235
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
++G++I+TK+DG K GGAL++VA TK PV F+G+GE+M++F+ FDVK FV+++LG+GD
Sbjct: 236 NIGSIILTKIDGTKKAGGALTSVATTKCPVEFVGSGENMEDFDKFDVKRFVNKMLGLGDI 295
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
G ++K+ + +D++ L++K+ G FTL+ Y+QFQ I+ +GP+ + SM+PG ++
Sbjct: 296 EGLVEKVSS-LNIDEKA-LMKKVETGTFTLKDFYDQFQQIMSLGPLQNILSMIPGMNNVN 353
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN-DSRIMRIARGSGRQVREVMEML 419
MP E++S +++ + + DS++ E++S SR++R+ARGSG + V ++L
Sbjct: 354 MP---EEDS---LRKMVCIFDSLSKNEINSDGRCFEECPSRVLRVARGSGTSYKMVYDLL 407
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMS 444
+++++ + KM KIP G+++
Sbjct: 408 AQFRQITGMMKKMT--KIPGFGDLA 430
>gi|429965858|gb|ELA47855.1| signal recognition particle protein SRP54 [Vavraia culicis
'floridensis']
Length = 468
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 184/469 (39%), Positives = 297/469 (63%), Gaps = 17/469 (3%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
LG SI+ +Q + + D+ + + + +I R L+Q +V K V +++ N+ + +
Sbjct: 5 LGKSINSTLQNLFGRDVTDQAI-DAAIKDIVRQLIQNNVGTKCVTQLKINLDNKIKNEKF 63
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
G NK + + AIF+EL ++DP + K+G+ VIM VGLQG+GKTTT KYA ++
Sbjct: 64 KPGINKAKWVYNAIFDELVNLVDPKCEPYKVKRGRSQVIMLVGLQGAGKTTTVCKYANFY 123
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
+KKG+K +VCADTFRAGAFDQ+KQNA K +P++GS ++ DPV++A+EGVE FKK+ +
Sbjct: 124 KKKGYKAGIVCADTFRAGAFDQIKQNALKINVPYFGS-SDPDPVKVALEGVEKFKKDKFE 182
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
+I+VDTSGRH QE LF EM ++ A PD ++FVMD+ IGQ+A QA FK+ V++G++
Sbjct: 183 VILVDTSGRHTQENDLFNEMEEIVNAIAPDNIVFVMDAGIGQSAEHQAMGFKEKVNLGSI 242
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TK+DG K GGA+S+VA TK P+ FIG+GE MD+ +VF K F++++LG GD G +
Sbjct: 243 ILTKVDGAEKAGGAISSVAITKCPIEFIGSGEGMDDLDVFSPKRFINKILGKGDLEGLAE 302
Query: 306 KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGR 365
KI + + +D++ E++ K+ G +TL+ Q Q ++ +GP+ +V M+PG + M
Sbjct: 303 KIKD-LKIDEK-EIVNKIRSGKYTLKDFNLQLQQLMSLGPLSKVMEMIPGMGNFPM---- 356
Query: 366 EKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKR 424
+ +++ + + DSMT +EL S L + +R+ RIARGSG + V++++ +++
Sbjct: 357 --SDEGVLRKMVCIFDSMTEKELGSDGEILKREPTRVTRIARGSGTRPELVLQLVAQFEM 414
Query: 425 LAKIWSKMK------GLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
+A + K+ L +MSA + Q + LP+ ++ Q+
Sbjct: 415 MANLMKKLGNNQGFMNLLNADTSKMSASEKAKLKQQATGFLPKNVINQM 463
>gi|150401682|ref|YP_001325448.1| signal recognition particle protein Srp54 [Methanococcus aeolicus
Nankai-3]
gi|166222333|sp|A6UWG4.1|SRP54_META3 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|150014385|gb|ABR56836.1| GTP-binding signal recognition particle SRP54 G- domain
[Methanococcus aeolicus Nankai-3]
Length = 450
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 188/444 (42%), Positives = 288/444 (64%), Gaps = 12/444 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG +I+ A+ ++ NAT +D+K++ E + +I +AL+QADV KLV M I++
Sbjct: 1 MLDKLGSNINNALSKIKNATFVDKKLVKEVIKDIQKALIQADVNVKLVFAMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + +++EL K+L + K PK ++I+ VG+QGSGKTT+
Sbjct: 61 YESAPKGLSKKDHIIKIVYDELVKLLGEEGQKLELDPKN--KNIILLVGIQGSGKTTSAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVET 178
K A QK+G+KPAL+ AD +R A+ QLKQ + K IP +G T++ P+ I EG++
Sbjct: 119 KLARTLQKRGFKPALIAADVYRPAAYQQLKQLSEKIHIPLHGDPTKTKTPMEITEEGLKQ 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FKK D+II+DT+GRHK+E+ L EEM+++ E NP+ +I V+D ++GQ A +QA+AFK
Sbjct: 179 FKKN--DVIIIDTAGRHKEESGLLEEMKEMKEKFNPEEIILVIDGTLGQQAKNQAKAFKD 236
Query: 239 SV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V ++G++++TKMDG AKGGGALSAVA +P+ FIGTGE +D+ E FD K F+SRLLGM
Sbjct: 237 AVENIGSILITKMDGSAKGGGALSAVAEIGAPIKFIGTGEKVDDLEPFDPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
GD ++K +++ D E L + G FTL +Y Q + I KMG + Q+ +M+PG
Sbjct: 297 GDLDSLLEKTEDIID-DDTEESLDAMMRGKFTLNELYSQLEAISKMGSMKQLMAMIPGMG 355
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
+ L PKG ++ K+K+Y +MDSMT+ E NP ++ SR+ RIA+G+G + E+ E
Sbjct: 356 TNL-PKGAADITEHKLKKYKIIMDSMTSTE--KENPDIIKTSRMKRIAKGAGVKQEEIKE 412
Query: 418 MLEEYKRLAKIWSKMKGLKIPKKG 441
+L+ Y + MK K+ K G
Sbjct: 413 LLKYYSTTKNAFQNMKSGKMLKMG 436
>gi|365757890|gb|EHM99761.1| Srp54p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 427
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/369 (48%), Positives = 248/369 (67%), Gaps = 11/369 (2%)
Query: 105 MFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYT 164
MFVGLQGSGKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYT
Sbjct: 1 MFVGLQGSGKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYT 60
Query: 165 ESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSS 224
E+DP ++A EG+ FKKE D+IIVDTSGRH+QE LF+EM ++S P+ I V+D+S
Sbjct: 61 ETDPAKVAEEGINKFKKEKFDIIIVDTSGRHRQEEELFQEMVEISNVIRPNQTIMVLDAS 120
Query: 225 IGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEV 284
IGQAA Q++AFK+S GA+++TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E
Sbjct: 121 IGQAAEQQSKAFKESSDFGAILLTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEK 180
Query: 285 FDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMG 344
F K F+S+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMG
Sbjct: 181 FSPKSFISKLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMG 240
Query: 345 PIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMR 403
P+ + M+PG S+ + G E+ SQ K+K+ + ++DSMT EEL+S + +R++R
Sbjct: 241 PLSNIAQMIPGMSNMMNQVGEEETSQ-KMKKMVYVLDSMTREELESDGRMFVEQPTRMVR 299
Query: 404 IARGSGRQVREVMEMLEEYKRLAKIWSKMK---------GLKIPKKGEMSALSRNMNAQH 454
+A+GSG V EV +L + + +A++ ++P M + N
Sbjct: 300 VAKGSGTSVFEVEMILMQQQMMARMAQTATQQQPGAPGANARMPGMPNMPGMPGMPNMPG 359
Query: 455 MSKVLPQGM 463
M KV PQ M
Sbjct: 360 MPKVTPQMM 368
>gi|440492796|gb|ELQ75334.1| Signal recognition particle, subunit Srp54 [Trachipleistophora
hominis]
Length = 468
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 183/469 (39%), Positives = 296/469 (63%), Gaps = 17/469 (3%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
LG SI+ +Q + + D+ + + EI R L+Q +V K V +++ N+ + ++L
Sbjct: 5 LGKSINSTLQNLFKKDVTDQGI-EAAIKEIIRQLIQNNVGTKCVTQLKINLDSKLKTEEL 63
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
G NK + + AIF+EL ++DP + K+GK VIMFVGLQG+GKTTT KYA ++
Sbjct: 64 KPGINKAKWVYNAIFDELVNLVDPKCEPYKVKRGKSQVIMFVGLQGAGKTTTVCKYANFY 123
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
+KKG+K +VCADTFRAGAFDQ+KQNA K +P++GS + DPV++A EGVE F+K+ +
Sbjct: 124 KKKGYKAGIVCADTFRAGAFDQIKQNALKINVPYFGS-ADPDPVKVASEGVEKFRKDKFE 182
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
+I+VDTSGRH QE LF EM ++ A P+ ++FVMD+ IGQ+A QA FK+ V++G++
Sbjct: 183 VILVDTSGRHTQENDLFNEMEEIVGAVKPENIVFVMDAGIGQSAEHQAMGFKEKVNLGSI 242
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TK+DG K GGA+S+VA T P+ FIG GE MD+ +VF + F++++LG GD G +
Sbjct: 243 ILTKVDGAEKAGGAISSVAITGCPIEFIGNGEGMDDLDVFSPRRFINKILGKGDLEGLAE 302
Query: 306 KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGR 365
KI + + +D++ E++ K+ G +TL+ Q Q ++ +GP+ +V M+PG + +P
Sbjct: 303 KIKD-LKIDER-EIVNKIKSGKYTLKDFNLQLQQLMSLGPLSKVMEMIPGMGN--LPISD 358
Query: 366 EKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKR 424
E +++ + + DSMT +EL S L + +R+ RIA+GSG + V++++ +++
Sbjct: 359 E----GVLRKMVCIFDSMTEKELGSDGEILKKETTRVTRIAKGSGTRPELVLQLVAQFEM 414
Query: 425 LAKIWSKMK------GLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 467
++ + K+ L +MSA + Q + LP+ ++ Q+
Sbjct: 415 MSNLMKKLGNNQGFMNLLNADTSKMSASEKAKLKQQATGFLPKNVINQM 463
>gi|45359114|ref|NP_988671.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis S2]
gi|74579561|sp|Q6LX03.1|SRP54_METMP RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|45047989|emb|CAF31107.1| signal recognition particle protein SRP54 [Methanococcus
maripaludis S2]
Length = 450
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 192/453 (42%), Positives = 291/453 (64%), Gaps = 11/453 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +K+ I + +++EL K+L K SVI+ +G+QGSGKTT+ K
Sbjct: 61 DEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFK 180
A Y QKKG +P L+ AD +R A+ QLKQ + K +P +G T + PV I EG+E K
Sbjct: 121 ARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEKLK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+II+DT+GRHK+E L EM+++ + TNP+ +I V+D ++GQ A +QA+AFK+SV
Sbjct: 181 K--VDVIIIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKESV 238
Query: 241 S-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
S +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SR+LG+GD
Sbjct: 239 SEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLGD 298
Query: 300 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
++K ++ MD+ E + + +G FTL +Y Q + I KMGP+ Q+ SM+PG
Sbjct: 299 LDSLLEKTEDI--MDESTEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMGG 356
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
MPK + ++AK+KRY MMDSMT EE NP+L+ SR+ RIA+G+G + E+ ++
Sbjct: 357 N-MPKEAAQLTEAKLKRYKIMMDSMTMEE--KENPELIKTSRLQRIAKGAGVKQEEIKDL 413
Query: 419 LEEYKRLAKIWSKMKGLKIPK-KGEMSALSRNM 450
L+ Y + +K K+PK G+M + R +
Sbjct: 414 LKYYSTTKNAFGNLKRGKMPKMGGQMGQIMRQL 446
>gi|431907352|gb|ELK11325.1| Signal recognition particle 54 kDa protein [Pteropus alecto]
Length = 438
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 172/301 (57%), Positives = 228/301 (75%), Gaps = 8/301 (2%)
Query: 162 SYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVM 221
+YTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VM
Sbjct: 57 NYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVM 116
Query: 222 DSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDE 281
D+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+
Sbjct: 117 DASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDD 176
Query: 282 FEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNIL 341
FE F +PF+S+LLGMGD G +DK++E + +D L++KL G FTLR MYEQFQNI+
Sbjct: 177 FEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIM 235
Query: 342 KMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDS- 399
KMGP Q+ M+PGF ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ +
Sbjct: 236 KMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQP 295
Query: 400 -RIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSK 457
RI R+ARGSG R+V E+L +Y + A++ KM G+K + K G+M S+N++ M+K
Sbjct: 296 GRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVSQSQMAK 352
Query: 458 V 458
+
Sbjct: 353 L 353
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNI 56
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENV 56
>gi|395504261|ref|XP_003756474.1| PREDICTED: signal recognition particle 54 kDa protein, partial
[Sarcophilus harrisii]
Length = 418
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 176/307 (57%), Positives = 230/307 (74%), Gaps = 9/307 (2%)
Query: 163 YTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMD 222
YTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD
Sbjct: 1 YTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMD 60
Query: 223 SSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEF 282
+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+F
Sbjct: 61 ASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDF 120
Query: 283 EVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILK 342
E F +PF+S+LLGMGD G +DK++E + +D L++KL G FTLR MYEQFQNI+K
Sbjct: 121 EPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMK 179
Query: 343 MGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDS-- 399
MGP Q+ M+PGF ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ +
Sbjct: 180 MGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPG 239
Query: 400 RIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 458
RI R+ARGSG R+V E+L +Y + A++ KM G+K + K G+M S+N++ M+K
Sbjct: 240 RIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVSQSQMAK- 295
Query: 459 LPQGMLK 465
L Q M K
Sbjct: 296 LNQQMAK 302
>gi|410722282|ref|ZP_11361588.1| signal recognition particle GTPase [Methanobacterium sp. Maddingley
MBC34]
gi|410597317|gb|EKQ51944.1| signal recognition particle GTPase [Methanobacterium sp. Maddingley
MBC34]
Length = 443
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 178/422 (42%), Positives = 277/422 (65%), Gaps = 6/422 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG ++++ +++++ TIIDE+V+ E + +I RAL+Q+DV KLV + I+
Sbjct: 1 MLGNLGKNLTKTMKKLAGMTIIDEEVVKEVIKDIQRALIQSDVNIKLVLNLSKTIEDRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + + + +++EL +L +K KP I+FVGLQGSGKTTT K
Sbjct: 61 NEEPPKGVTAKEHVIKIVYDELVHLLGDKAAEVEIEK-KPYKILFVGLQGSGKTTTIGKM 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y QKKG+ PA++C DT+R A++QL+Q + YG +D + +A +G++ FKK
Sbjct: 120 ARYLQKKGFNPAIICTDTWRPAAYEQLRQLTENLNLSLYGDPNNNDALDLAQKGLKEFKK 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ DLIIVDT+GRHK+E L +EM Q+S PD V+ V+D +IGQ A +QA AF ++
Sbjct: 180 Q--DLIIVDTAGRHKEEKDLLDEMEQISAVVEPDEVMLVIDGTIGQQAKEQALAFSKTTK 237
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G++++TK+DG AKGGGALSAV+ +P+ FIGTGE +++ EVFD + F+SRLLGMGD
Sbjct: 238 IGSIVITKLDGSAKGGGALSAVSEIGAPIKFIGTGERIEDLEVFDPERFISRLLGMGDIR 297
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
+++ E+ D E + + G FTL+ MY QF+ + KMGP+ QV +MLPG ++L
Sbjct: 298 SLIERAEEIAEEDVDTEAMDAMLSGKFTLKDMYSQFEMMNKMGPMQQVMNMLPGMGNKL- 356
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
PK + ++ K+ +Y +MDSMT +EL ++P+++ SR+ RIARGSG + +V E+L+
Sbjct: 357 PKNASQVTEEKLGKYKILMDSMTEQEL--THPEIIKQSRVKRIARGSGMRNEDVKELLKY 414
Query: 422 YK 423
Y+
Sbjct: 415 YQ 416
>gi|333988486|ref|YP_004521093.1| Signal recognition 54 kDa protein [Methanobacterium sp. SWAN-1]
gi|333826630|gb|AEG19292.1| Signal recognition 54 kDa protein [Methanobacterium sp. SWAN-1]
Length = 443
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 177/421 (42%), Positives = 271/421 (64%), Gaps = 6/421 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG +++ +++++ +IID++V+ E + +I RAL+Q+DV KLV + I+
Sbjct: 1 MLDNLGKNLTNTMKKLAGMSIIDKEVVKEVIKDIQRALIQSDVNIKLVLNLSKTIEDRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + + + ++ EL ++ K KP I+FVGLQGSGKTTT K
Sbjct: 61 NEEPPKGVTPKEHVIKIVYEELVNLVGEKAQEVEIDK-KPYKILFVGLQGSGKTTTIGKI 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
+ Y QKKG+ PA++C DT+R A++QL+Q +P YG D + +A +G+ FKK
Sbjct: 120 SRYLQKKGFNPAIICTDTWRPAAYEQLRQLTENMNLPLYGDPENKDALDLAKKGLNEFKK 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ DLIIVDT+GRHK+E L +EM ++S PD VI V+D +IGQ A +QA AF ++
Sbjct: 180 Q--DLIIVDTAGRHKEEKDLLDEMEEISAIVKPDEVILVIDGTIGQQAREQALAFSKTTK 237
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G++I+TK+DG AKGGGALSAVA +P+ FIGTGE +D+FE FD + F+SRLLGMGD
Sbjct: 238 IGSIIITKLDGSAKGGGALSAVAEIGAPIKFIGTGERVDDFEAFDPERFISRLLGMGDIR 297
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
++K E+ D + + + G FTL+ MY QF+ + KMGP+ QV +M+PG S+L
Sbjct: 298 SLIEKAEEIAKDDIDMDSVDAMMSGKFTLKDMYSQFEMMNKMGPMKQVMNMIPGMGSKL- 356
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
PK + ++ K+ +Y +MDSMT EL+ +P+++ SR+ RIARGSG + +V E+++
Sbjct: 357 PKNASQMTEEKLGKYKILMDSMTEYELE--HPEVIKQSRVKRIARGSGMRNEDVKELMKY 414
Query: 422 Y 422
Y
Sbjct: 415 Y 415
>gi|408380979|ref|ZP_11178529.1| signal recognition particle protein Srp54 [Methanobacterium
formicicum DSM 3637]
gi|407816244|gb|EKF86806.1| signal recognition particle protein Srp54 [Methanobacterium
formicicum DSM 3637]
Length = 443
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 180/422 (42%), Positives = 272/422 (64%), Gaps = 6/422 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG +++ +++++ TIIDE+V+ E + +I RAL+Q+DV KLV + I+
Sbjct: 1 MLGNLGKNLTNTMKKLAGMTIIDEEVVKEVIKDIQRALIQSDVNIKLVLNLSKTIEDRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G + + + ++ EL +L K KP I+FVGLQGSGKTTT K
Sbjct: 61 NEKPPKGVTAKEHVIKIVYEELVHLLGDKAAEVEIDK-KPYKILFVGLQGSGKTTTIGKM 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y QKKG+ PAL+C DT+R A++QL+Q + YG D + +A +G++ FKK
Sbjct: 120 AKYLQKKGFNPALICTDTWRPAAYEQLRQLTESLNLSLYGDPNNKDALDLARKGLKEFKK 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ DLIIVDT+GRHK+E L +EM Q+S PD V+ V+D +IGQ A +QA AF ++
Sbjct: 180 Q--DLIIVDTAGRHKEEKDLLDEMEQISAVVEPDEVMLVIDGTIGQQAKEQALAFSKTTK 237
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G++++TK+DG AKGGGALSAVA +P+ FIGTGE +++ EVFD + F+SRLLGMGD
Sbjct: 238 IGSIVITKLDGSAKGGGALSAVAEIGAPIKFIGTGERIEDLEVFDPERFISRLLGMGDIR 297
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
+++ E+ D E + + G FTL+ MY QF+ + KMGP+ QV +MLPG ++L
Sbjct: 298 SLIERAEEIAEEDVDAEAMDAMLSGKFTLKDMYSQFEMMNKMGPMQQVMNMLPGMGNKL- 356
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
PK + ++ K+ +Y +MDSMT +EL ++P+++ SR+ RIARGSG + +V E+L+
Sbjct: 357 PKNASQVTEEKLSKYKILMDSMTEQEL--THPEIIKQSRVKRIARGSGMRNEDVKELLKY 414
Query: 422 YK 423
Y+
Sbjct: 415 YQ 416
>gi|340624864|ref|YP_004743317.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis X1]
gi|339905132|gb|AEK20574.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis X1]
Length = 450
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 190/453 (41%), Positives = 290/453 (64%), Gaps = 11/453 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +K+ I + +++EL K+L K SVI+ +G+QGSGKTT+ K
Sbjct: 61 EEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFK 180
A Y QKKG +P L+ AD +R A+ QLKQ + K +P +G T + PV I EG+E K
Sbjct: 121 ARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEKLK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D++I+DT+GRHK+E L EM+++ + TNP+ +I V+D ++GQ A +QA+AFK+SV
Sbjct: 181 K--VDVVIIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKESV 238
Query: 241 S-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
S +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SR+LG+GD
Sbjct: 239 SEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLGD 298
Query: 300 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
++K ++ MD+ E + + +G FTL +Y Q + I KMGP+ Q+ SM+PG
Sbjct: 299 LDSLLEKTEDI--MDESTEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMGG 356
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
MPK + ++ K+KRY MMDSMT EE NP+L+ SR+ RIA+G+G + E+ ++
Sbjct: 357 N-MPKEAAQLTEDKLKRYKIMMDSMTMEE--KENPELIKTSRLQRIAKGAGVKQEEIKDL 413
Query: 419 LEEYKRLAKIWSKMKGLKIPK-KGEMSALSRNM 450
L+ Y + +K K+PK G+M + R +
Sbjct: 414 LKYYSTTKNAFGNLKRGKMPKMGGQMGQIMRQL 446
>gi|134045071|ref|YP_001096557.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis C5]
gi|166222335|sp|A4FVX4.1|SRP54_METM5 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|132662696|gb|ABO34342.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanococcus maripaludis C5]
Length = 450
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 191/453 (42%), Positives = 291/453 (64%), Gaps = 11/453 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSDALNKIKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +K+ I + +++EL K+L K SVI+ +G+QGSGKTT+ K
Sbjct: 61 EEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFK 180
A Y QKKG +P L+ AD +R A+ QLKQ + K +P +G T + PV I EG+E K
Sbjct: 121 ARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVDITKEGMEKLK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+II+DT+GRHK+E +L EM+++ + TNP+ +I V+D ++GQ A +QA+AFK+SV
Sbjct: 181 K--VDVIIIDTAGRHKEEESLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKESV 238
Query: 241 S-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
S +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SR+LG+GD
Sbjct: 239 SEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLGD 298
Query: 300 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
++K ++ MD+ E + + +G FTL +Y Q + I KMGP+ Q+ SM+PG
Sbjct: 299 LDSLLEKTEDI--MDESTEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMGG 356
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
L PK + ++ K+KRY MMDSMT EE NP+L+ SR+ RIA+G+G + E+ ++
Sbjct: 357 NL-PKEAAQLTEDKLKRYKIMMDSMTLEE--KENPELIKTSRLQRIAKGAGVKQDEIKDL 413
Query: 419 LEEYKRLAKIWSKMKGLKIPK-KGEMSALSRNM 450
L+ Y + +K K+PK G+M + R +
Sbjct: 414 LKYYSTTKNAFGNLKRGKMPKMGGQMGQIMRQL 446
>gi|304315442|ref|YP_003850589.1| signal recognition particle protein Srp54 [Methanothermobacter
marburgensis str. Marburg]
gi|302588901|gb|ADL59276.1| signal recognition particle protein Srp54 [Methanothermobacter
marburgensis str. Marburg]
Length = 442
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 189/435 (43%), Positives = 277/435 (63%), Gaps = 12/435 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+S+ +++++ TI+DE+V+ E + +I RAL+Q+DV KLV + +I++
Sbjct: 1 MLGNLGRSLSKTMKKLAGMTIVDEEVVKEVIKDIQRALIQSDVNIKLVFNLSKSIEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPK-KGKPSVIMFVGLQGSGKTTTCTK 120
++ G + I ++ E+ K+L G+ S K + KP I+F+GLQGSGKTTT K
Sbjct: 61 NEEPPKGITPKEHIISIVYEEMVKLL--GERSHELKIEEKPYRILFLGLQGSGKTTTIGK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +KKG+ +VC DT+R AF+QLKQ I YG D + +A +G+E F+
Sbjct: 119 LARYLRKKGFTVGVVCTDTWRPAAFEQLKQYTEGQDISVYGDPENKDALDLAEKGLERFQ 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ D+II DT+GRHK+E L EM ++S P I V+D +IGQ A +QA AF+++
Sbjct: 179 KK--DVIIFDTAGRHKEEKDLLREMEELSAVIKPHEAILVIDGTIGQQAREQALAFREAT 236
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++IVTK+DG AKGGGALSAVA +P+ FIGTGE +D+ EVFD + F+SRLLGMGD
Sbjct: 237 DIGSIIVTKLDGSAKGGGALSAVAEIGAPIRFIGTGERIDDLEVFDPERFISRLLGMGDL 296
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
++K+ EV + E L + G FTL+ M QF+ + KMGP+ QV +MLPG
Sbjct: 297 KSLLEKVEEVSDEELAEESLDAILSGKFTLKDMRVQFEMMGKMGPLQQVMNMLPGVGK-- 354
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+PK K ++ I++Y+ +MDSMT EEL+ P ++ SRI RI+RGSG + +V E+L+
Sbjct: 355 LPKDATKMTEETIRKYLIIMDSMTEEELE--KPDIIKQSRIRRISRGSGTRNEDVKELLK 412
Query: 421 EYKRLAKIWSKMKGL 435
Y+ K MKGL
Sbjct: 413 YYRVTRK---AMKGL 424
>gi|320100244|ref|YP_004175836.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfurococcus mucosus DSM 2162]
gi|319752596|gb|ADV64354.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfurococcus mucosus DSM 2162]
Length = 450
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/410 (42%), Positives = 274/410 (66%), Gaps = 5/410 (1%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
EK ++E + E+ + L++ADV KL E+ + IK+ + G +++ ++ EL
Sbjct: 20 EKAVDEFIRELQKELVRADVNLKLAMELTSRIKERALKAEPPPGISRKEWFITVVYEELT 79
Query: 85 KMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
++L KPS P K KP VIM VGLQGSGKTTT K AY+++ +G + LV ADTFR
Sbjct: 80 RLLGGERKPSVKPAK-KPWVIMLVGLQGSGKTTTTAKLAYFYKLEGLRVGLVAADTFRPA 138
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFE 203
A+ QLKQ + +P YG SD V IAV+GVE F++ D+II+DT+GRH +E L E
Sbjct: 139 AYMQLKQLGEQVGVPVYGEPGNSDAVAIAVKGVEFFRERKMDVIIIDTAGRHHREEDLLE 198
Query: 204 EMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAV 263
EM+++SE PD V+ V+D++IGQ AF+ A+ F ++ +G++IVTK+DG AKGGGALSAV
Sbjct: 199 EMKKMSEHVKPDEVMLVIDAAIGQQAFNIARRFHEATPIGSIIVTKLDGTAKGGGALSAV 258
Query: 264 AATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKL 323
AAT + + FIGTGE +DE EVF+ FVSR+LG+GD ++K+ V +D E ++L
Sbjct: 259 AATGASIKFIGTGEKIDELEVFNPPRFVSRILGLGDIESLIEKVRR-VQLDFTEEDARRL 317
Query: 324 SEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSM 383
EG +R++Y+Q ++ KMGP+G++ M+PG ++ + K+ + K+ +++ +++SM
Sbjct: 318 IEGKVNMRLVYKQLVSLRKMGPLGKIMQMIPGLGVKIPFEVDSKQLEEKMSKWLAIINSM 377
Query: 384 TNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMK 433
T EELD NP +++ SR+ RIARG+G +V +V E+L++Y+ + K+ +++
Sbjct: 378 TYEELD--NPDIIDRSRMKRIARGAGVEVEDVKELLKQYELVKKLSKQLR 425
>gi|91772216|ref|YP_564908.1| signal recognition particle protein Srp54 [Methanococcoides
burtonii DSM 6242]
gi|121686981|sp|Q12ZG8.1|SRP54_METBU RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|91711231|gb|ABE51158.1| signal recognition particle SRP54 [Methanococcoides burtonii DSM
6242]
Length = 439
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 190/438 (43%), Positives = 271/438 (61%), Gaps = 16/438 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ A IDEK + E + +I RALLQADV KLV +M ++IK+
Sbjct: 1 MVMDKLGSSLQDALKKLVGAGRIDEKTVTEVVKDIQRALLQADVNVKLVMQMSSHIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ G N R + + ++ EL ++ G+ + P K P IM +GLQGSGKTTT +K
Sbjct: 61 LKEEVPPGMNPREHVIKIVYQELISIV--GRSADIPLK--PQTIMMIGLQGSGKTTTTSK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+ Y Q+KG KPA++CADTFR GA+ QLK K +PFYG D V I G+
Sbjct: 117 LSRYFQRKGLKPAVICADTFRPGAYQQLKTLCDKLNVPFYGEVGNPDAVGIVERGLAELG 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D++IVDT+GRH EA L +EM Q+ E PD + V+D +IGQ A +QA+AF SV
Sbjct: 177 KN--DVLIVDTAGRHSLEADLIDEMEQIHEIAQPDYKLLVLDGAIGQQASEQARAFNDSV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V+++K+DG AKGGGALSAV+ T S + FIG GE D+ E F+ F+SRLLGMGD
Sbjct: 235 GISGVVISKLDGTAKGGGALSAVSETNSAIAFIGVGETPDDLEKFEPDRFISRLLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFSS 358
++K E + ++ ++ + G FTL+ MY Q + + KMGP+ Q+ MLP G +
Sbjct: 295 KSLIEKAEET--LSEEDIDMEAMMRGRFTLKDMYSQLEAMNKMGPMKQIMQMLPLGGMGA 352
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
+L K ++ K+K Y +MDSMT EEL NP+L+ SRI RI+ GSG V E+
Sbjct: 353 KLSDDAY-KVTEDKMKGYRVLMDSMTEEEL--LNPRLLGSSRIKRISLGSGSSPDAVREL 409
Query: 419 LEEYKRLAKIWSKMKGLK 436
L+ YK + + MKGL+
Sbjct: 410 LKYYKMM---QNAMKGLR 424
>gi|298675575|ref|YP_003727325.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Methanohalobium evestigatum Z-7303]
gi|298288563|gb|ADI74529.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanohalobium evestigatum Z-7303]
Length = 440
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 181/434 (41%), Positives = 272/434 (62%), Gaps = 10/434 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ N+ IDEK +N+ + +I RALLQADV +LV M IK+
Sbjct: 1 MVMDKLGSSLQDALKKLVNSGRIDEKSVNDVVKDIQRALLQADVNVQLVMNMSKQIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ +G N R + + ++ EL ++ G T +P IM +GLQGSGKTTT +K
Sbjct: 61 LKEEVPSGMNPREHVIRIVYQELINIIGEG----TEINLEPQTIMMIGLQGSGKTTTTSK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QKKG KPA++CADTFR GA+ QLK K IPFYG D + I G++
Sbjct: 117 LARYFQKKGLKPAVICADTFRPGAYHQLKSLCDKNSIPFYGEEGNEDSLGIVERGMDKLG 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D++I+DT+GRH E L EEM Q++ PD + V+D++IGQ A +QA+AF +S+
Sbjct: 177 K--YDVLIIDTAGRHSLEQDLIEEMEQINSIAKPDKKLLVLDAAIGQQASEQARAFNESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGALSAV+ T S + FIG GE + E F+ F+SRLLGMGD
Sbjct: 235 GISGVVITKLDGTAKGGGALSAVSETNSSIAFIGVGETSGDLEKFEPDRFISRLLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
++K E + ++ ++ + +G FTL+ MY+Q + + KMGP+ QV M+PG +
Sbjct: 295 RSLIEKAEESLSEEELD--VESMMQGRFTLKDMYKQLEAVNKMGPLKQVMQMMPGGMGQN 352
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ + + + + K+ RY +MDSMT +E+D +PKL+ SRI RI+RGSG + +V E+L+
Sbjct: 353 ISEEQFQVTSEKLSRYRIIMDSMTVDEMD--DPKLIGSSRIKRISRGSGSKPDDVRELLK 410
Query: 421 EYKRLAKIWSKMKG 434
+K + +G
Sbjct: 411 YHKTMQNAMKNFRG 424
>gi|255636768|gb|ACU18718.1| unknown [Glycine max]
Length = 175
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 156/175 (89%), Positives = 170/175 (97%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNATIIDEKVLN+CLN+ITRALLQ+DVQFKLVR+MQTNIK IV
Sbjct: 1 MVLAELGGSISRALQQMSNATIIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKNIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRIIQQA+FNELCK+LDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
YA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV++ +G
Sbjct: 121 YAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKLLWKG 175
>gi|444722487|gb|ELW63179.1| Signal recognition particle 54 kDa protein [Tupaia chinensis]
Length = 594
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 165/278 (59%), Positives = 214/278 (76%), Gaps = 4/278 (1%)
Query: 162 SYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVM 221
+YTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VM
Sbjct: 57 NYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVM 116
Query: 222 DSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDE 281
D+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+
Sbjct: 117 DASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDD 176
Query: 282 FEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNIL 341
FE F +PF+S+LLGMGD G +DK++E + +D L++KL G FTLR MYEQFQNI+
Sbjct: 177 FEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIM 235
Query: 342 KMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDS- 399
KMGP Q+ M+PGF ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ +
Sbjct: 236 KMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQP 295
Query: 400 -RIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK 436
RI R+ARGSG R+V E+L +Y + A++ KM G+K
Sbjct: 296 GRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIK 333
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNI 56
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENV 56
>gi|282165325|ref|YP_003357710.1| signal recognition 54 kDa protein [Methanocella paludicola SANAE]
gi|282157639|dbj|BAI62727.1| signal recognition 54 kDa protein [Methanocella paludicola SANAE]
Length = 442
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 189/434 (43%), Positives = 269/434 (61%), Gaps = 10/434 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ AIQ+++NA ID++++++ + +I RAL+QADV KLV ++ IK+
Sbjct: 1 MVLDNLGSSLKSAIQKLANAGKIDKEIIDDVVKDIQRALIQADVNVKLVMKLSNRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG + R + + ++ EL ++ GK TP +P IM VGLQGSGKTTT K
Sbjct: 61 LTEAPPAGMDSREHVLRIVYTELVNII--GKA--TPIALEPQTIMMVGLQGSGKTTTTAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + +KG KPA++CADT+R GA+DQL Q K + FYG D V I G++ +
Sbjct: 117 LARFFSRKGLKPAVICADTYRPGAYDQLSQLCEKLGVMFYGERDNKDAVAIVRNGLKETQ 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+ IVDT+GRH E L +EM+ + TN V+D++IGQ A +QA+AF +V
Sbjct: 177 K--YDVRIVDTAGRHALETELIKEMKDIWGLTNFTHRFLVLDAAIGQQASEQAKAFNDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGALSAV+ T + + FIG GE D+ E FD F+SRLLGMGD
Sbjct: 235 GITGVVITKLDGTAKGGGALSAVSDTNTSIAFIGVGETPDDLERFDPDGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
++K +EV + Q+ ++K+ G FTL MY Q + I KMGP+ Q+ SMLP
Sbjct: 295 KALVEKANEV--LSQKDVNVEKMMTGKFTLNDMYSQLEAINKMGPLKQIMSMLPLGGLGN 352
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+P + +Q K++ Y +MDSMT +E D +PKL+ SRI RIA GSGR +V E+L+
Sbjct: 353 IPDDAYRMTQDKMQGYRIIMDSMTEDEKD--DPKLIGSSRIARIAMGSGRAPEDVRELLK 410
Query: 421 EYKRLAKIWSKMKG 434
+K + K MKG
Sbjct: 411 YHKMMQKAMKGMKG 424
>gi|336476226|ref|YP_004615367.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Methanosalsum zhilinae DSM 4017]
gi|335929607|gb|AEH60148.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanosalsum zhilinae DSM 4017]
Length = 439
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 183/436 (41%), Positives = 274/436 (62%), Gaps = 13/436 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ AI+++ ++ IDEK +N+ + +I RALLQ+DV K+V M +IK+
Sbjct: 1 MVMDKLGSSLQDAIKKLVSSGRIDEKTVNDVVKDIQRALLQSDVNVKMVMTMSKHIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ G N R + + ++ EL ++ GK + P K P IM +GLQGSGKTTT +K
Sbjct: 61 LKEEVPKGMNPREHVIRIVYQELTSII--GKGTDIPLK--PQKIMMIGLQGSGKTTTTSK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QKKG +PA++CADTFR GA+ QLK + + FYG D V I G++ F
Sbjct: 117 LARYFQKKGLRPAVICADTFRPGAYQQLKTLCERLNVAFYGEEGNEDAVGIVKRGLKEF- 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ I+DT+GRH E L +EM + +PD + V+D++IGQ A +QA+AF +S+
Sbjct: 176 -EKYDIKIIDTAGRHALEKDLIKEMEDIHAICDPDYKLLVLDAAIGQQASEQARAFNESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG AKGGGALSAV+ T S + FIGTGE ++ E F+ F+SRLLGMGD
Sbjct: 235 GISGVIITKLDGTAKGGGALSAVSETNSSIAFIGTGETPEDLEKFEPDRFISRLLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFSS 358
++K E + D+ ++ + +G FTL+ MY+Q + + KMGP+ Q+ MLP G +
Sbjct: 295 KTLLEKAEESLDKDELD--MEAMMKGRFTLKDMYKQMEALNKMGPMKQIMQMLPLGGLGA 352
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
++ P+ + + K+ RY +MDSMT EE+ NP+L+ SRI RI+RGSG +V E+
Sbjct: 353 KI-PEDAYQVTGDKLTRYRIIMDSMTEEEM--LNPRLIGSSRIKRISRGSGNSPEDVREL 409
Query: 419 LEEYKRLAKIWSKMKG 434
L+ +K + M+G
Sbjct: 410 LKYHKMMQNAMKGMRG 425
>gi|347522718|ref|YP_004780288.1| GTP-binding signal recognition particle SRP54 G- domain containing
protein [Pyrolobus fumarii 1A]
gi|343459600|gb|AEM38036.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Pyrolobus fumarii 1A]
Length = 445
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 181/454 (39%), Positives = 287/454 (63%), Gaps = 27/454 (5%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + E+ + E + ++ RALL ADV +LV ++ I++ + G
Sbjct: 6 AIRDAVRKFLRLSGPYERAVEEFIRDLQRALLSADVNVRLVFDLTRRIRERALKEKPPPG 65
Query: 69 HNKRRIIQQAIFNELCKML----DPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAY 123
++R + ++ EL K+ +P KP +TP VIM VG+QGSGKTTT K A
Sbjct: 66 ASRRDWFLKIVYEELVKLFGGDREPEVKPPYTP-----YVIMLVGVQGSGKTTTAAKLAL 120
Query: 124 YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKEN 183
++++ G+K LV AD +R GA+DQL+Q A + + FYG D V IA GV+ K+
Sbjct: 121 FYKRMGYKVGLVAADVYRPGAYDQLRQLAERIGVMFYGEPGSRDAVGIATRGVKELKERG 180
Query: 184 CDLIIVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+++IVDT+GRH E AL EEM+++SEA PD V+ V+D+++GQ +FD A+ F ++
Sbjct: 181 ANIVIVDTAGRHGYGSEVALLEEMKRMSEAIKPDEVMLVIDAAMGQKSFDLAKRFHEATP 240
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G++IVTKMDG AKGGGALSAVAAT + + FIGTGE ++EFEVF+ + FVSRLLGMGD
Sbjct: 241 IGSIIVTKMDGTAKGGGALSAVAATGAIIKFIGTGEDVEEFEVFNPRRFVSRLLGMGDIE 300
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG----FS 357
G +++I + ++ + ++++ EG RI+Y Q + + +MGP+ +V MLPG +
Sbjct: 301 GILERIKRLEAAEEFEKTVEEMLEGKLNFRILYRQLRQLTRMGPLRKVLQMLPGVGLAVT 360
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
E+ G E KI++++ +MDSMT EELD +P++++ SR+ RIARG+G ++ +V E
Sbjct: 361 DEIAKLGEE-----KIRKWLAIMDSMTYEELD--HPEIIDKSRMRRIARGAGVELDDVKE 413
Query: 418 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMN 451
++ Y+ L ++ ++K +KG + L RN+
Sbjct: 414 LVNYYRNLQRMLRRLK----KQKGALERLLRNIG 443
>gi|383319835|ref|YP_005380676.1| signal recognition particle subunit FFH/SRP54 (srp54) [Methanocella
conradii HZ254]
gi|379321205|gb|AFD00158.1| signal recognition particle subunit FFH/SRP54 (srp54) [Methanocella
conradii HZ254]
Length = 442
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 192/453 (42%), Positives = 272/453 (60%), Gaps = 15/453 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ A+Q+++NA +D++V++E + +I RA++QADV KLV + I++
Sbjct: 1 MVLDSLGASLKSALQKLANAGKVDKEVIDEVVKDIQRAMIQADVNVKLVMRLSGRIRERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G + R + + ++ EL ++ GK TP +P IM VGLQGSGKTTT K
Sbjct: 61 LTEAPPPGMDSREHVLRIVYAELVNII--GKA--TPVALEPQTIMMVGLQGSGKTTTTAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +KG KPA++CADT+R GA+DQL Q K + FYG D V I G+
Sbjct: 117 LARYFARKGLKPAVICADTYRPGAYDQLSQLCAKLGVTFYGERDNKDAVAIVRNGLRETA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+ IVDT+GRH E L +EM+ ++ N V+D++IGQ A +QA+AF +V
Sbjct: 177 K--YDVRIVDTAGRHALETGLIKEMKDIAALANFTHRFLVLDAAIGQQASEQAKAFNDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG AKGGGALSAV+ T + + FIG GE + E FD F+SRLLGMGD
Sbjct: 235 GITGVIITKLDGTAKGGGALSAVSDTNTSIAFIGVGETPEGLERFDPDGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFSS 358
++K +EV + Q+ ++K+ G FTL MY Q + I KMGP+ Q+ SMLP G +
Sbjct: 295 KALVEKANEV--LSQKDVNVEKMMSGRFTLNDMYAQLEAINKMGPLKQIMSMLPLGGLGA 352
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
+ K +Q K+ Y +MDSMT E + +PKL+ SRIMRIARGSGR +V E+
Sbjct: 353 NITDD-VYKMTQDKLLSYRIIMDSMT--EAEKEDPKLIGSSRIMRIARGSGRSPEDVREL 409
Query: 419 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMN 451
L+ +K + K MKG P + + L + MN
Sbjct: 410 LKYHKMMQKAMKGMKGG--PGRANLKKLMKQMN 440
>gi|73668456|ref|YP_304471.1| signal recognition particle protein Srp54 [Methanosarcina barkeri
str. Fusaro]
gi|121731303|sp|Q46E01.1|SRP54_METBF RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|72395618|gb|AAZ69891.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanosarcina barkeri str. Fusaro]
Length = 443
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 192/445 (43%), Positives = 265/445 (59%), Gaps = 24/445 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ A IDE+ +NE + +I RALLQADV KLV M IK+
Sbjct: 1 MVMEKLGDSLQGALKKLIGAGRIDERTVNEVVKDIQRALLQADVNVKLVMGMSQRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG N R + + ++ EL +++ G + KP +IM VGLQGSGKTT+ K
Sbjct: 61 MKEAPPAGMNPREHVIRIVYQELMEIIGKG----AEIQLKPQIIMMVGLQGSGKTTSTAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG K +V ADTFR GA+ QLK K + FYG D V I G++
Sbjct: 117 LARYFQRKGLKAGVVAADTFRPGAYHQLKTLCEKLNVAFYGEENNPDAVEITRNGLKAL- 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ IVDT+GRH EA L EEM Q++ PD V+D+ IGQ A QA AF SV
Sbjct: 176 -EKYDVKIVDTAGRHALEADLIEEMEQINAVAKPDHKFMVLDAGIGQQASQQAHAFNDSV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG AKGGGALSAV+ TK+P+ FIG GE ++FE F+ F+SRLLGMGD
Sbjct: 235 GITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP------ 354
M+K E + ++ ++ L +G FTL+ MY+Q + + KMGP+ Q+ SMLP
Sbjct: 295 KSLMEKAEET--LSEEDVNVEALMQGRFTLKDMYKQLEAMNKMGPLKQIMSMLPLGMGGM 352
Query: 355 ---GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
S E+ + + K+K Y T+MDSMT EE+ ++PKL+ SRI RI+RGSG
Sbjct: 353 GGVKLSDEMF-----QATSDKMKNYKTIMDSMTEEEM--TDPKLIGGSRIKRISRGSGCS 405
Query: 412 VREVMEMLEEYKRLAKIWSKMKGLK 436
EV E+L+ +K + +G K
Sbjct: 406 PEEVRELLKYHKTMQTALKGFRGGK 430
>gi|145494914|ref|XP_001433451.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400568|emb|CAK66054.1| unnamed protein product [Paramecium tetraurelia]
Length = 436
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 182/430 (42%), Positives = 271/430 (63%), Gaps = 15/430 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG SI + +++ I+E V+++ LNEI+ AL + DV L++E++ NI+
Sbjct: 1 MVLTELGQSIKGVLNKLNQPQQINEVVVDQILNEISIALQKTDVNESLIQELRENIRLEF 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L L N +R++Q++I EL K+L SF PKKG+P+V+M +GL+GSGKT+TC K
Sbjct: 61 KLH-LLEFINLQRLLQKSIIEELTKLLQNDIMSFQPKKGQPNVMMLIGLKGSGKTSTCFK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYY QK+GWK ++CA + + D +KQ A K K+ FYGSY ESDPV +GV+ FK
Sbjct: 120 YAYYFQKRGWKVGIICAGSSQLQEIDWVKQQAKKIKVLFYGSYFESDPVNATQDGVQIFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+I++DT G++++E L +EM+Q+ PD +IFVMDSSIGQ DQ FK +
Sbjct: 180 KEGIDIILIDTVGKYEKETDLCKEMKQMEYMIQPDNIIFVMDSSIGQICQDQVFVFKSAF 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ G++I+TK+D H+KGGGA+SAV AT +P+ FI GE ++ F F+S+LLG D
Sbjct: 240 NQGSIIITKVDRHSKGGGAISAVVATNTPIDFICNGEGHEDLLEFQSSQFISKLLGFEDL 299
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS-MLPGFSSE 359
G ++K++ V + + E FTLR + + + +LK G I FS L G S
Sbjct: 300 KGLLNKLNSFVSIGPK--------EKQFTLRDLESEVKKLLKFGSINYFFSKCLMGIPS- 350
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDS--SNPKLMNDSRIMRIARGSGRQVREVME 417
EKE ++KRY+ +++SMT++ELD S +++SRI+RIA+GSG + +V
Sbjct: 351 --INVNEKEQTQQMKRYLYILNSMTSKELDGQVSVVVTLSNSRIIRIAKGSGTTIEQVNN 408
Query: 418 MLEEYKRLAK 427
+L+ YK K
Sbjct: 409 LLKIYKSFIK 418
>gi|116753684|ref|YP_842802.1| signal recognition particle protein Srp54 [Methanosaeta thermophila
PT]
gi|121693787|sp|A0B638.1|SRP54_METTP RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|116665135|gb|ABK14162.1| signal recognition particle subunit FFH/SRP54 (srp54) [Methanosaeta
thermophila PT]
Length = 444
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 189/437 (43%), Positives = 274/437 (62%), Gaps = 15/437 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LGGS+ A++++++AT +D+ ++++ + +I RALLQADV KLV + I++
Sbjct: 1 MVLDNLGGSLRGALKKIASATRVDKALVDDAVRDIQRALLQADVNVKLVMSLSNRIRERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG N R + ++ EL ++ G+ + P K IM VGLQGSGKTTT K
Sbjct: 61 LNEKPPAGMNPREHVINIVYQELINLI--GRGTDIPLK--KQTIMLVGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q++G + A++CADTFRAGA+DQLK + I FYG + +A G+E K
Sbjct: 117 LATYFQRRGLRTAVICADTFRAGAYDQLKALCDRQGIFFYGEKGNENAPEVAKNGLEATK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+ IVDT+GRH E+ L +EM+ + N D + VMD++IGQ A +QA+AF ++V
Sbjct: 177 K--YDVRIVDTAGRHALESDLIQEMKDIHAVVNADHKLLVMDAAIGQQASEQARAFNEAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG AKGGGALSAVA TK+ V FIG GE + E F+ F+SRLLGMGD
Sbjct: 235 GITGVIITKLDGTAKGGGALSAVAETKTSVAFIGVGETASDLEKFEADRFISRLLGMGDI 294
Query: 301 SGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFS 357
G ++K EV + D + + K G FTL+ MY+Q + + KMGP+ Q+ MLP G
Sbjct: 295 KGLIEKAQEVQIESDVDVDAMMK---GKFTLKDMYKQLEAMNKMGPLKQIMQMLPFGGIG 351
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
EL K + ++ +++ Y +MDSMT+EEL+ +PK++N SRI RIARGSG + V E
Sbjct: 352 IELSDK-EYQVTKERLEAYRFIMDSMTDEELE--DPKIINASRIKRIARGSGTRPELVKE 408
Query: 418 MLEEYKRLAKIWSKMKG 434
+L+ + + K M+G
Sbjct: 409 LLKSHAAMQKAIKGMRG 425
>gi|218884721|ref|YP_002429103.1| GTP-binding signal recognition particle SRP54, G- domain-containing
protein [Desulfurococcus kamchatkensis 1221n]
gi|218766337|gb|ACL11736.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Desulfurococcus kamchatkensis 1221n]
Length = 449
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 177/417 (42%), Positives = 270/417 (64%), Gaps = 5/417 (1%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
EK + E + E+ + L++ADV KL E+ IK+ + G ++R ++ EL
Sbjct: 20 EKSVEEFIRELQKELVRADVNLKLAVEITNRIKERALKSEPPPGISRREWFITIVYEELT 79
Query: 85 KMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
++L KPS P K KP VIM VGLQGSGKTTT K AY+++ +G+K LV ADTFR
Sbjct: 80 RLLGGDKKPSIKPLK-KPWVIMLVGLQGSGKTTTAAKLAYFYKLEGYKVGLVAADTFRPA 138
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFE 203
A+ QLKQ + +P YG ++ V IAV+GV F + D+II+DT+GRH +E L +
Sbjct: 139 AYTQLKQLGEQIGVPVYGEPDNNNAVSIAVKGVSFFIERRTDIIIIDTAGRHHKEEDLLD 198
Query: 204 EMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAV 263
EMR++SE PD VI V+D+SIGQ A + A+ F ++ +G++IVTK+DG AKGGGALSAV
Sbjct: 199 EMRKISEQVKPDEVILVIDASIGQQAHNIAKKFHETTPIGSIIVTKLDGTAKGGGALSAV 258
Query: 264 AATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKL 323
AAT + V FIGTGE +DE EVF+ FVSR+LG+GD ++K+ + +D E ++L
Sbjct: 259 AATGAMVKFIGTGEKIDELEVFNPPRFVSRILGLGDIESLVEKVRR-LQLDFTEEDAKRL 317
Query: 324 SEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSM 383
EG +R++Y+Q ++ KMGP+ ++ M+PG +L + K+ + K+ +++ ++SM
Sbjct: 318 IEGKINMRLVYKQLVSLRKMGPLAKIMQMIPGLGVKLPLEVDPKQLEVKLSKWLAAINSM 377
Query: 384 TNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKK 440
T EEL+ NP +++ SRI RIA G+G ++ +V E+L++Y+ + K+ +++ I KK
Sbjct: 378 TYEELE--NPDIIDKSRIKRIAYGAGVEIDDVRELLKQYELMKKLSKQLRRRDILKK 432
>gi|410670619|ref|YP_006922990.1| signal recognition particle protein Srp54 [Methanolobus
psychrophilus R15]
gi|409169747|gb|AFV23622.1| signal recognition particle protein Srp54 [Methanolobus
psychrophilus R15]
Length = 439
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 184/438 (42%), Positives = 276/438 (63%), Gaps = 16/438 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ + IDE+ + E + +I RALLQADV KLV EM +IK+
Sbjct: 1 MVMDKLGSSLQDALKKLVKSGRIDERTVTEVVKDIQRALLQADVNVKLVMEMSKHIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ +G + R + + ++ EL ++ GK + P K P IM +GLQGSGKTTT +K
Sbjct: 61 LHEEVPSGMSPREHVLRIVYQELINII--GKSTDIPLK--PQKIMMIGLQGSGKTTTTSK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG +PA++CADTFR GA+ QLK TK + FYG D V I G++ F
Sbjct: 117 LARYFQRKGLRPAVICADTFRPGAYQQLKTLCTKLDVAFYGEEGNPDAVGIVERGLKEFH 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+IIVDT+GRH E L +EM + PD + V+D +IGQ A +QA+ F +S+
Sbjct: 177 K--SDVIIVDTAGRHSLEKDLIKEMEDIHAMAQPDYKLLVLDGAIGQQASEQARTFNESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI++K+DG AKGGGALSAV+ T S + FIG GE ++ E F+ F+SRLLGMGD
Sbjct: 235 GISGVIISKLDGTAKGGGALSAVSETNSSIAFIGVGETPEDLEKFEPDRFISRLLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFSS 358
++K E + D++ + +Q + G FTL+ MY+Q +++ K+GP+ Q+ MLP G +
Sbjct: 295 KSLIEKAEETLA-DEELD-VQSMMMGRFTLKDMYKQLESLNKLGPMKQIMQMLPLGGLGA 352
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
++ P+ + + K+KRY +MDSMT EE+ NP+++ SRI RIA GSG +V E+
Sbjct: 353 KI-PEDAYQVTGDKLKRYRILMDSMTEEEM--LNPRVIGSSRIKRIAIGSGSSAEDVREL 409
Query: 419 LEEYKRLAKIWSKMKGLK 436
L+ +K + + MKG +
Sbjct: 410 LKYHKMM---QTAMKGFR 424
>gi|269860268|ref|XP_002649856.1| signal recognition particle subunit FFH/SRP54 [Enterocytozoon
bieneusi H348]
gi|220066696|gb|EED44169.1| signal recognition particle subunit FFH/SRP54 [Enterocytozoon
bieneusi H348]
Length = 475
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 184/450 (40%), Positives = 283/450 (62%), Gaps = 19/450 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNI-KKI 59
+L LG I +Q + I D V++ + +I LLQ +V K V E++ N+ +KI
Sbjct: 7 FMLKDLGNFIGNRLQNLFCVQITDS-VISNLIKDICTQLLQNNVNPKYVFELRKNLNQKI 65
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
N NK +IIQQ +F+ L +++DP + KG+ VI+FVGLQGSGKTT+
Sbjct: 66 NNQISNQTNKNKIKIIQQTVFDCLSELIDPQVSPYKISKGEQHVIVFVGLQGSGKTTSIC 125
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGS----YTESDPVRIAVEG 175
KYA +++ KG+K +VCADTFRAGA+DQ+KQNA K + ++G+ TE DPV IA +G
Sbjct: 126 KYARFYRSKGFKVGIVCADTFRAGAYDQIKQNANKINVAYWGNQDEDNTEVDPVSIARKG 185
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FK+ + +LI+VDTSGRH Q LF E++ + + NP+ +IFV+D+ IGQ+A DQ Q
Sbjct: 186 VSHFKRHDYELILVDTSGRHVQSEDLFLEIQNLVTSINPNNIIFVIDAGIGQSAEDQVQG 245
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+++++G +I+TK+DG K GGALS++A TK PV FIGTGE M++FE F+ K F+S+LL
Sbjct: 246 FKKAINIGGIILTKIDGAEKAGGALSSIAVTKCPVEFIGTGEKMEDFERFNSKIFISKLL 305
Query: 296 GMGDWSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
G+ ++ G +++I V +D P E+ KL++G FTL + I +GPI + + P
Sbjct: 306 GIPNFEGMLEQI---VDLDLNPDEISSKLAQGRFTLGDFRHFYNQICTLGPITNLLKITP 362
Query: 355 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVR 413
G + ++P + K+K+ ++ +SM EL+S + +R++RIARGSG
Sbjct: 363 GMNKFVIP------DETKLKKIGSIFNSMCKAELNSIGDIFNKEPNRMIRIARGSGTSKE 416
Query: 414 EVMEMLEEYKRLAKIWSKMKGLKIPKKGEM 443
+V E+L +K ++ + K+ + +P GEM
Sbjct: 417 QVSELLHNFKSMSLMAKKI--MNMPGIGEM 444
>gi|429961678|gb|ELA41223.1| hypothetical protein VICG_01712 [Vittaforma corneae ATCC 50505]
Length = 399
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 163/364 (44%), Positives = 250/364 (68%), Gaps = 10/364 (2%)
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
+++++ + F L + LDPG + +K K +V++FVGLQG GKTT+ KYA +++KKG
Sbjct: 3 TRQKVVHRIFFETLVRFLDPGSKPYEIQKEKSNVVVFVGLQGCGKTTSICKYANFYKKKG 62
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
++ +VCADTFRAGAFDQ+KQNA+K IP++GS + DPV++A EGV F+K + +LI+V
Sbjct: 63 FRVGIVCADTFRAGAFDQIKQNASKIGIPYFGS-PDPDPVKVAKEGVSKFRKNDFELILV 121
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRH QE ALF EMR + +A PD ++FVMD+ IGQ+A +QA FK +V VG +I+TK
Sbjct: 122 DTSGRHTQEEALFAEMRDLVDAICPDNIVFVMDAGIGQSAEEQAAGFKNAVKVGGIILTK 181
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DG +K GGALS+VA T+ P+ F+GTGE MD+ E F+ + FV ++LGMGD G ++++
Sbjct: 182 IDGASKAGGALSSVATTQCPIEFVGTGEGMDDIEKFNARRFVGKMLGMGDIDGLIERLSS 241
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
+ +D++ ++++KL+ G F L + I+ +GPI ++ M+PG + +P
Sbjct: 242 -IEIDKE-DVIEKLTTGKFRLIDFKNIYTQIVSLGPISKMLEMIPGLGNMAIP------D 293
Query: 370 QAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKI 428
++K KR M M DSMT +EL+S+ + + SRI R+ARGSG V EML +++++ +
Sbjct: 294 ESKFKRIMHMFDSMTRKELESNGDVFLKEPSRIDRVARGSGTHRDLVSEMLGNFRQMSSM 353
Query: 429 WSKM 432
K+
Sbjct: 354 MKKL 357
>gi|435850492|ref|YP_007312078.1| signal recognition particle GTPase [Methanomethylovorans hollandica
DSM 15978]
gi|433661122|gb|AGB48548.1| signal recognition particle GTPase [Methanomethylovorans hollandica
DSM 15978]
Length = 439
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/438 (42%), Positives = 275/438 (62%), Gaps = 16/438 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LGGS+ A++++ + IDE +NE + +I RA+LQADV KLV M +IK+
Sbjct: 1 MVMEKLGGSLQDALKKLVKSGRIDEHTVNEVVKDIQRAMLQADVNVKLVMTMSNHIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+D+ +G N R + + ++ EL ++ GK + P K P IM +GLQGSGKTTT +K
Sbjct: 61 MKEDVPSGMNPREHVIRIVYQELINII--GKGTDIPLK--PQKIMMIGLQGSGKTTTTSK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG +PA++CADTFR GA+ QLK K + FYG D V I G++ +
Sbjct: 117 LARYFQRKGLRPAVICADTFRPGAYQQLKTLCGKLNVTFYGEEGNPDAVGIVERGLKEVE 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+II+DT+GRH E L EEM Q+ +PD + V+D +IGQ A +QA+AF S+
Sbjct: 177 K--YDVIIIDTAGRHSLEKDLIEEMEQIHAIAHPDYKLLVLDGAIGQQASEQARAFNDSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V+++K+DG AKGGGA+SAV+ T S + FIG GE ++ E F+ F+S+LLGMGD
Sbjct: 235 GISGVVISKLDGTAKGGGAISAVSETNSSIAFIGVGETPEDLEKFESDRFISKLLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPEL-LQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP-GFSS 358
G ++K E + ++ EL ++ + G FTL+ MY+Q + + KMGP+ Q+ MLP G
Sbjct: 295 QGLIEKAQENL---KEEELDMEAMMRGRFTLKDMYKQLETLNKMGPMKQIMQMLPLGGMG 351
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
+P+ + + K+ +Y +MDSMT EE+ NP+L+ +RI RI+ GSG +V E+
Sbjct: 352 VKVPEEAYQVTGEKLTKYRVVMDSMTEEEM--LNPRLIGSARIKRISMGSGCGPDDVREL 409
Query: 419 LEEYKRLAKIWSKMKGLK 436
L+ YK + + MKGL+
Sbjct: 410 LKYYKTM---QNTMKGLR 424
>gi|288931995|ref|YP_003436055.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Ferroglobus placidus DSM 10642]
gi|288894243|gb|ADC65780.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Ferroglobus placidus DSM 10642]
Length = 431
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/435 (41%), Positives = 277/435 (63%), Gaps = 14/435 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
S+ +++++ ++ +D+K++ E + ++ RAL++ADV + V+E+ IKK +++ +G
Sbjct: 4 SLKDVVKKIARSSSVDKKLVEEIVRDVQRALIKADVNVRQVKEISDAIKKRALSEEVLSG 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
N R I + ++ E+ + + G KK K IM VGLQGSGKTTT K A Y + K
Sbjct: 64 LNPREHIIKIVYEEILRGVGEG-FDIPLKKSK---IMLVGLQGSGKTTTAAKIAKYFKDK 119
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G K A++ DT R A++QLKQ A +A + F+G E D V+I EG+E K + D+I+
Sbjct: 120 GMKAAVIAGDTHRPAAYEQLKQLAEQAGLGFFGKKEEKDAVKIVKEGLEALK--DYDVIV 177
Query: 189 VDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 248
+DT+GRH E L EEM++++E + PD V+D+SIGQ A QA+AF ++V + A+++T
Sbjct: 178 IDTAGRHALEEELIEEMKRIAEVSKPDYKFLVLDASIGQLASKQAEAFNEAVGIDAIVIT 237
Query: 249 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 308
K DG AKGGGALSA P+ FIGTGE +++FE FD FVSRLLGMGD ++K+
Sbjct: 238 KFDGTAKGGGALSAARLIGIPIAFIGTGEKIEDFEKFDPAGFVSRLLGMGDIKALLEKVE 297
Query: 309 EVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP-GFSSELMPKGRE 366
+V ++ PE K G FTL+ +Y+Q + + KMGPI ++F MLP GFS ++ + E
Sbjct: 298 RIVKEEELDPEAFLK---GKFTLKDVYKQLEAMNKMGPISKIFEMLPFGFSLKVDDEALE 354
Query: 367 KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLA 426
+Q K+K++ +MDSMT EEL NPK+++ SRI RIA GSG ++V E+L Y +
Sbjct: 355 M-TQEKMKKFKVIMDSMTEEEL--LNPKIIDSSRIRRIAIGSGTTPQDVKELLNYYNTMK 411
Query: 427 KIWSKMKGLKIPKKG 441
+ ++K K+P KG
Sbjct: 412 NLMKRLKKGKLPIKG 426
>gi|390937784|ref|YP_006401522.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Desulfurococcus fermentans DSM 16532]
gi|390190891|gb|AFL65947.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Desulfurococcus fermentans DSM 16532]
Length = 451
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/417 (42%), Positives = 269/417 (64%), Gaps = 5/417 (1%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
EK + E + E+ + L++ADV KL E+ IK+ + G ++R ++ EL
Sbjct: 22 EKSVEEFIRELQKELVRADVNLKLAVEITNRIKERALKSEPPPGISRREWFITIVYEELT 81
Query: 85 KMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
++L KPS P K KP VIM VGLQGSGKTTT K AY+++ +G+K LV ADTFR
Sbjct: 82 RLLGGDKKPSIKPLK-KPWVIMLVGLQGSGKTTTAAKLAYFYKLEGYKVGLVAADTFRPA 140
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFE 203
A+ QLKQ + + YG +D V IAV+GV F + D+II+DT+GRH +E L +
Sbjct: 141 AYTQLKQLGEQIGVQVYGEPDNNDAVSIAVKGVSFFIERRTDIIIIDTAGRHHKEEDLLD 200
Query: 204 EMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAV 263
EMR++SE PD VI V+D+SIGQ A + A+ F ++ +G++IVTK+DG AKGGGALSAV
Sbjct: 201 EMRKISEQVKPDEVILVIDASIGQQAHNIAKKFHETTPIGSIIVTKLDGTAKGGGALSAV 260
Query: 264 AATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKL 323
AAT + V FIGTGE +DE EVF+ FVSR+LG+GD ++K+ + +D E ++L
Sbjct: 261 AATGAMVKFIGTGEKIDELEVFNPPRFVSRILGLGDIESLVEKVRR-LQLDFTEEDAKRL 319
Query: 324 SEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSM 383
EG +R++Y+Q ++ KMGP+ ++ M+PG +L + K+ + K+ +++ ++SM
Sbjct: 320 IEGKINMRLVYKQLVSLRKMGPLAKIMQMIPGLGVKLPLEVDPKQLEVKLSKWLAAINSM 379
Query: 384 TNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKK 440
T EEL+ NP +++ SRI RIA G+G ++ +V E+L++Y+ + K+ +++ I KK
Sbjct: 380 TYEELE--NPDIIDKSRIKRIAYGAGVEIDDVRELLKQYELMKKLSKQLRRRDILKK 434
>gi|193084148|gb|ACF09814.1| signal recognition particle subunit Ffh SRP54 [uncultured marine
group III euryarchaeote SAT1000-53-B3]
Length = 444
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 176/434 (40%), Positives = 265/434 (61%), Gaps = 9/434 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++ +++++ A+ I +++ E + +I RAL+Q+DV +L E+ I+
Sbjct: 1 MVLDALGDALRNTLRKIAGASHISPELIKELVKDIQRALIQSDVNVRLALELSKTIEYRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG R + + + EL K + S + K G P IM VGL G GKTTT K
Sbjct: 61 LEEKAPAGMTGREHVVRIVHQELVKAIGE---SRSLKLG-PQKIMLVGLYGQGKTTTTGK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+ +KKG L+ AD R AFDQL Q + ++P +GS D ++ EG+E FK
Sbjct: 117 LGKHFKKKGLNLGLIAADVHRPAAFDQLSQIGEQVQVPVFGSSDNKDAGKVVKEGLEEFK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D++IVDT+GRH + L EM+ +S+ PD ++ VMD+++GQ A QAQAF +V
Sbjct: 177 E--LDVVIVDTAGRHALDEELISEMKSISKIVKPDEILLVMDATVGQQAGPQAQAFHDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V VI+TK+DG AKGGGALSAVA TK+P++F+GTGE +D E D F+SRLLGMGD
Sbjct: 235 GVSGVILTKLDGSAKGGGALSAVAVTKAPIVFVGTGESLDSLETLDPDRFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+++ EV+ + + +K+ G FTL M EQ + + KMGP+ +V M+PG S +
Sbjct: 295 QTLLERAEEVLDAESAEDTARKMLSGKFTLIDMREQMEALTKMGPLSKVMEMVPGMSG-M 353
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
M KG+ E+Q +++++ +M SMT EEL+ NPK++ SRI RIA+GSG +E+ E+L+
Sbjct: 354 MKKGQMDETQDRLEKFKVLMSSMTKEELE--NPKIIKRSRINRIAKGSGSDSQEIRELLK 411
Query: 421 EYKRLAKIWSKMKG 434
Y + K+ S + G
Sbjct: 412 HYNQSRKMMSNLGG 425
>gi|124028501|ref|YP_001013821.1| Signal recognition particle GTPase [Hyperthermus butylicus DSM
5456]
gi|171769654|sp|A2BNB5.1|SRP54_HYPBU RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|123979195|gb|ABM81476.1| Signal recognition particle GTPase [Hyperthermus butylicus DSM
5456]
Length = 447
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 179/433 (41%), Positives = 276/433 (63%), Gaps = 16/433 (3%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I RA+ ++ + E ++NE + ++ RAL+ ADV +LV + I++ + G
Sbjct: 7 IRRAVSKLLKRSGPYENIVNEFIRDLQRALISADVNVRLVFNLTKRIRERALKEQPPPGL 66
Query: 70 NKRRIIQQAIFNELCKML----DPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYY 124
++R + + ++EL K+ +P KP +TP VIM VG+QGSGKTTT K A +
Sbjct: 67 SRREWLVKLTYDELVKLFGGEYEPEVKPPYTP-----YVIMMVGVQGSGKTTTVGKLAKF 121
Query: 125 HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENC 184
++ G++ +V ADT+R GA++QLKQ A +A FYG DPV IA GVE K+
Sbjct: 122 YRGMGYRVGVVAADTYRPGAYEQLKQLADRAGAMFYGEPGSKDPVGIARRGVEELKQRGA 181
Query: 185 DLIIVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSV 242
D++IVDT+GRH +E AL +EM++++EA PD V+ V+D+++GQ ++D A+ F ++ V
Sbjct: 182 DIVIVDTAGRHGYGEEEALLDEMKRIAEAIKPDEVVLVIDAAMGQKSYDLAKRFHEATPV 241
Query: 243 GAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSG 302
G++IVTKMDG AKGGGALSAVAAT + + FIGTGE +DE EVF K FV+RLLGMGD
Sbjct: 242 GSIIVTKMDGTAKGGGALSAVAATGARIKFIGTGEDIDEIEVFRPKRFVARLLGMGDLES 301
Query: 303 FMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMP 362
++KI + +++ + + ++ G T R +Y+Q Q + K+GP ++ M+PG S+ L
Sbjct: 302 LLEKIERLRGVEEFEKTVAEMMSGKITFRTIYKQLQQVTKLGPFRKILQMIPGISTMLES 361
Query: 363 KGR-EKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLE 420
+ S+ K+K+++T+M+SMT EELD NP L+ + SR+ RIA G+G + EV E+
Sbjct: 362 LDEAARLSEEKVKKWLTIMNSMTYEELD--NPNLLEERSRVKRIAVGAGVEPSEVRELYN 419
Query: 421 EYKRLAKIWSKMK 433
YK + K+ ++K
Sbjct: 420 YYKSVKKMMRQLK 432
>gi|296109473|ref|YP_003616422.1| GTP-binding signal recognition particle SRP54 G- domain protein
[methanocaldococcus infernus ME]
gi|295434287|gb|ADG13458.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus infernus ME]
Length = 448
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 190/433 (43%), Positives = 281/433 (64%), Gaps = 9/433 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +L ++++AI ++ NA +D+K++ E + +I RAL+QADV KLV ++ I++
Sbjct: 1 MLEKLSENLNKAINKIKNAMFVDKKLIKEVVKDIQRALIQADVNVKLVLKITKEIERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G +K+ I + ++ EL K+L + G+ +VIM VG+QGSGKTTT K
Sbjct: 61 EEEPPKGFSKKEHIIKIVYEELVKLLGEEAKPLKIEPGRRNVIMLVGIQGSGKTTTAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y +KKG++ L+ ADT+R A++QLKQ A K +P YG ++ P I EG+ FK
Sbjct: 121 AKYLKKKGYRVGLIAADTYRPAAYEQLKQLAEKIDVPIYGDLSKK-PEDIVKEGLNKFK- 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV- 240
N D++I+DT+GRHK+E L EEM+++ E +NPD ++ V+D +IGQ A QA+AFK +V
Sbjct: 179 -NVDVVIIDTAGRHKEEKGLLEEMKRIKEISNPDEIMLVIDGTIGQQARVQAKAFKDAVG 237
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++IVTK+DG AKGGGALSAVA TK+P+ FIGTGE +D+FE FD K F+SRLLG+GD
Sbjct: 238 EIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGTGEKIDDFEEFDPKKFISRLLGLGDL 297
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+ K E++ ++ E ++ + G FTL + Q + I MG + ++ SM+PG S
Sbjct: 298 DTLLKKADEIID-EKAEESVEAIMRGKFTLNELKAQLEAIENMGSMKKILSMIPGLSG-- 354
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
MPK ++AKIKRY ++DSMT EE NPK++ SRI RIARGSG EV E+L
Sbjct: 355 MPKELSHLTEAKIKRYKVIIDSMTMEE--RENPKIIKASRIRRIARGSGSSESEVKEVLR 412
Query: 421 EYKRLAKIWSKMK 433
Y+ K++
Sbjct: 413 YYETTKNAIEKLR 425
>gi|20093371|ref|NP_619446.1| signal recognition particle protein Srp54 [Methanosarcina
acetivorans C2A]
gi|23822174|sp|Q8THD0.1|SRP54_METAC RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|19918737|gb|AAM07926.1| signal recognition particle, 54 kDa protein [Methanosarcina
acetivorans C2A]
Length = 440
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 188/442 (42%), Positives = 266/442 (60%), Gaps = 21/442 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ A IDE+ +NE + +I RALLQADV KLV M IK+
Sbjct: 1 MVMEKLGDSLQGALKKLIGAGRIDERTVNEVVKDIQRALLQADVNVKLVMGMSQRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG N R + + ++ EL +++ G + KP IM VGLQGSGKTT+ K
Sbjct: 61 MKEEPPAGMNPREHVIRIVYQELMEIIGKG----AEIQLKPQTIMMVGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG K +V ADTFR GA+ QLK A K + FYG D V I G++ +
Sbjct: 117 LARYFQRKGLKAGVVAADTFRPGAYHQLKTLAEKLNVGFYGEEGNPDAVEITKNGLKALE 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+ IVDT+GRH EA L EEM ++ PD V+D+ IGQ A QA AF SV
Sbjct: 177 K--YDIRIVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG AKGGGALSAV+ TK+P+ FIG GE ++FE F+ F+SRLLGMGD
Sbjct: 235 GITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP------ 354
M+K E + ++ ++ L +G FTL+ MY+Q + + KMGP+ Q+ SMLP
Sbjct: 295 KSLMEKAEE--SLSEEDVNVEALMQGRFTLKDMYKQLEAMNKMGPLKQIMSMLPMGMGGM 352
Query: 355 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
FS E+ + + K+K Y +MDSMT EE+ ++P+++ SRI RI++GSG +
Sbjct: 353 KFSDEMF-----QATSDKMKNYKVIMDSMTEEEM--TDPRVIGGSRIKRISKGSGCSSED 405
Query: 415 VMEMLEEYKRLAKIWSKMKGLK 436
V E+L+ +K + +G K
Sbjct: 406 VRELLKYHKTMQTALKGFRGGK 427
>gi|378756834|gb|EHY66858.1| signal recognition particle 54 kDa subunit [Nematocida sp. 1 ERTm2]
Length = 477
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 178/433 (41%), Positives = 274/433 (63%), Gaps = 10/433 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L+ LG IS A+Q + EK LN+ + +IT +LL ++V ++V ++ I +
Sbjct: 1 MLSDLGAGISNALQGFFGSKE-GEKELNDAIKKITTSLLGSNVNTRVVLNVRKRILERFK 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
D+ K + +Q+ +F ELC ++D GK F PKK + S ++FVGLQGSGKTTTC KY
Sbjct: 60 PQDIPTKSAKEKALQKIVFEELCAIMDSGKEPFKPKKKEVSTVLFVGLQGSGKTTTCCKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y++++G+K +VCADTFRAGA++Q+KQN I Y +P +A G + K
Sbjct: 120 AKYYKQRGFKVGIVCADTFRAGAYEQVKQNVQGMNIELYIPSDSVNPAHVARAGTDKLKV 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
C+L++VDTSGRH QE LF+EM ++ A +P IFV+D+SIGQ A A++F V
Sbjct: 180 SGCNLVLVDTSGRHTQEGELFDEMEEIVAAIDPTASIFVVDASIGQTAEIHARSFMSRVK 239
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G+VI+TK DG GGAL +VA TK+PV FIGTGE M+ E F+ K FV RL+G+GD S
Sbjct: 240 LGSVIITKTDGTKNIGGALCSVAETKTPVAFIGTGEGMNHIESFNPKGFVGRLMGLGDIS 299
Query: 302 GFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
F +KI + + ++Q EL+ K+ G F++ Y+Q++ IL++GPIGQ+ S++PG +S +
Sbjct: 300 SFAEKIEGLNISQEKQEELIGKIKAGEFSIGDFYDQYKRILELGPIGQLLSLIPGLNSSM 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
EKE K+ T+ +MT +EL ++ + SR++R+A+GSG +V + +
Sbjct: 360 F---NEKE----FKKMGTIFTAMTKKELKTNGEVFIRSLSRLVRVAKGSGVTPTQVRDAI 412
Query: 420 EEYKRLAKIWSKM 432
Y+ +A+++ K+
Sbjct: 413 NTYRMMAQMFQKI 425
>gi|2231060|emb|CAA73234.1| fifty-four homologue of SRP54 [Sulfolobus acidocaldarius]
Length = 446
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 179/420 (42%), Positives = 269/420 (64%), Gaps = 12/420 (2%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
EK +NE + E+ L++ADV +LV+++ IKK + + + KR +++EL
Sbjct: 21 EKAVNEFIKELQIILIKADVNVRLVKDLTDRIKKRITEEKPPSAIEKREWFISIVYDELS 80
Query: 85 KMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
++ K P PKK P +IM VG+QGSGKTTT K A +++KKG+K LV AD +R
Sbjct: 81 RLFGGDKEPEVMPKK-LPYIIMLVGVQGSGKTTTSGKLALFYKKKGYKVGLVAADIYRPA 139
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK--QEAAL 201
A++QL Q + IP YG +P+ IA G+E F KE +++I+DT+GRH +EA+L
Sbjct: 140 AYEQLIQIGQQINIPVYGEPGNKNPIEIATNGLEKFLKEKMNIVIIDTAGRHGYGEEASL 199
Query: 202 FEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALS 261
EEM+ + + +PD VI V+D+SIGQ A+D A F Q+ +G++IV+KMDG AKGGGALS
Sbjct: 200 LEEMKSMYDKIHPDEVILVIDASIGQKAYDLASRFHQASPIGSLIVSKMDGTAKGGGALS 259
Query: 262 AVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQ 321
AV AT + + FIGTGE +DE EVF+ + FVSRLLG+GD ++KI V + + ++
Sbjct: 260 AVIATGAQIKFIGTGEKLDELEVFNPRRFVSRLLGLGDIESIIEKIKSVEDYENLEKRME 319
Query: 322 KLSEGN--FTLRIMYEQFQNILKMGPIGQVFSMLPGFSS-ELMPKGREKESQAKIKRYMT 378
+ G TLR +Y+Q + KMGP+G++F MLPG +P+ + K + KI+ +M
Sbjct: 320 DVISGKTKLTLRDIYKQLIALRKMGPLGKIFQMLPGAGILSQVPEEQLKLGEEKIRTFMA 379
Query: 379 MMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYK---RLAKIWSKMKGL 435
+M+SMT +ELD NP +++ +R+ RIA+G+G V EV E+L++Y+ L K+ + KGL
Sbjct: 380 IMNSMTYKELD--NPSIIDKARMRRIAKGAGVTVEEVKELLKQYQMTNNLLKMVKRRKGL 437
>gi|119872111|ref|YP_930118.1| GTP-binding signal recognition particle [Pyrobaculum islandicum DSM
4184]
gi|158512993|sp|A1RS43.1|SRP54_PYRIL RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|119673519|gb|ABL87775.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum
islandicum DSM 4184]
Length = 433
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 180/438 (41%), Positives = 273/438 (62%), Gaps = 12/438 (2%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
LG S+ ++++ + IDE L E EI RALL+ADV +V+ N K + +
Sbjct: 4 LGEVFSKLVEKIRGVSYIDEATLQELSREIQRALLKADVPLDMVKTFTENAVKRMREEKP 63
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYY 124
AG R + +++EL K+L +P+ F P K KP +++ +G++GSGKTTT K A Y
Sbjct: 64 PAGIPPREYVLYILYDELVKLLGGEQPAEFKPVK-KPYLVLLLGVEGSGKTTTAAKLARY 122
Query: 125 HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENC 184
K+G++ LV DT R AFDQLKQ A K +PFYG D V IA GV+ FK N
Sbjct: 123 LVKRGYRVGLVETDTIRPAAFDQLKQLAEKIGVPFYGERDSKDAVEIARRGVQNFK--NM 180
Query: 185 DLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 244
D++I+DT+GRHK E AL +E++ + EA NPD VI V+D+++G+ A QA+AF + + + +
Sbjct: 181 DVVIIDTAGRHKNEEALLQEVKMIYEAVNPDEVILVIDATVGKLAAAQAEAFMKYLPIHS 240
Query: 245 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 304
VI+TKMD A+GGGAL+AV T + V FIG GE +DEF++F+ + FV+R+LGMGD +
Sbjct: 241 VIITKMDSTARGGGALAAVIKTGARVKFIGVGEDVDEFDLFNPRKFVARVLGMGDLDALV 300
Query: 305 DKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKG 364
+KI V ++ ++LQ++ G L +Q + +LK+GP+ +V +LPG + + +
Sbjct: 301 EKIKAVF---EEEKVLQEIESGRLDLLTFKKQIEGLLKLGPLSKVLQLLPGGFAAKISEE 357
Query: 365 REKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKR 424
+ + SQ +K++ ++ SMT EEL NP ++N SRI RIA G+G ++V EML Y+
Sbjct: 358 QVELSQKNLKKWYAILSSMTIEEL--KNPDILNASRIRRIALGAGVTPKDVKEMLTVYEN 415
Query: 425 LAKIWSKMK---GLKIPK 439
L K+ +K ++IPK
Sbjct: 416 LKKMSKTLKRQLRMRIPK 433
>gi|193084084|gb|ACF09754.1| signal recognition particle subunit Ffh SRP54 [uncultured marine
group III euryarchaeote AD1000-40-D7]
Length = 444
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/438 (40%), Positives = 267/438 (60%), Gaps = 17/438 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++ +++++ A+ I +++ E + +I RALLQ+DV +L E+ I+
Sbjct: 1 MVLDALGDALRNTLRKIAGASHISPELIKELVRDIQRALLQSDVNVRLALELSKTIENRA 60
Query: 61 NLDDLAAGHNKR----RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ AG R RI+ Q + N L + S + K G P IM VGL G GKTT
Sbjct: 61 LEEKAPAGMTGREHVVRIVHQELVNALGE-------SRSLKLG-PQKIMLVGLYGQGKTT 112
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
T K + +KKG L+ AD R AFDQL Q + ++P +GS D ++ EG+
Sbjct: 113 TTGKLGKHFKKKGLNLGLIAADVHRPAAFDQLSQIGEQIQVPVFGSSDNKDAAKVVKEGL 172
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
+ F + D++IVDT+GRH + L EM+ +S+ PD ++ VMD+++GQ A QAQAF
Sbjct: 173 KEFTE--LDVVIVDTAGRHALDEELISEMKSISKIVQPDEILLVMDATVGQQAGPQAQAF 230
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
+V V VI+TK+DG AKGGGALSAVA TK+P++F+GTGE +D E D F+SRLLG
Sbjct: 231 HDAVGVSGVILTKLDGSAKGGGALSAVAVTKAPIVFVGTGESLDSLETLDPDRFISRLLG 290
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
MGD +++ EV+ + + +K+ G FTL M EQ + + KMGP+ +V M+PG
Sbjct: 291 MGDLQTLLERAEEVLDAESAEDTARKMLSGKFTLIDMREQMEALTKMGPLSKVMEMVPGM 350
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 416
S +M KG+ E+Q K++++ +M+SMT EEL+ NPK++ SRI RIA+GSG +E+
Sbjct: 351 SG-MMKKGQMDETQDKLEKFKVLMNSMTEEELE--NPKIIKRSRINRIAKGSGSDPQEIR 407
Query: 417 EMLEEYKRLAKIWSKMKG 434
++L++Y + K+ S + G
Sbjct: 408 DLLKQYNQSRKMMSNIGG 425
>gi|70607071|ref|YP_255941.1| signal recognition 54 kDa protein [Sulfolobus acidocaldarius DSM
639]
gi|449067310|ref|YP_007434392.1| signal recognition particle protein Srp54 [Sulfolobus
acidocaldarius N8]
gi|449069580|ref|YP_007436661.1| signal recognition particle protein Srp54 [Sulfolobus
acidocaldarius Ron12/I]
gi|73920792|sp|O07853.2|SRP54_SULAC RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|68567719|gb|AAY80648.1| signal recognition 54 kDa protein [Sulfolobus acidocaldarius DSM
639]
gi|449035818|gb|AGE71244.1| signal recognition particle protein Srp54 [Sulfolobus
acidocaldarius N8]
gi|449038088|gb|AGE73513.1| signal recognition particle protein Srp54 [Sulfolobus
acidocaldarius Ron12/I]
Length = 444
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/420 (42%), Positives = 269/420 (64%), Gaps = 12/420 (2%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
EK +NE + E+ L++ADV +LV+++ IKK + + + KR +++EL
Sbjct: 19 EKAVNEFIKELQIILIKADVNVRLVKDLTDRIKKRITEEKPPSAIEKREWFISIVYDELS 78
Query: 85 KMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
++ K P PKK P +IM VG+QGSGKTTT K A +++KKG+K LV AD +R
Sbjct: 79 RLFGGDKEPEVMPKK-LPYIIMLVGVQGSGKTTTSGKLALFYKKKGYKVGLVAADIYRPA 137
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK--QEAAL 201
A++QL Q + IP YG +P+ IA G+E F KE +++I+DT+GRH +EA+L
Sbjct: 138 AYEQLIQIGQQINIPVYGEPGNKNPIEIATNGLEKFLKEKMNIVIIDTAGRHGYGEEASL 197
Query: 202 FEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALS 261
EEM+ + + +PD VI V+D+SIGQ A+D A F Q+ +G++IV+KMDG AKGGGALS
Sbjct: 198 LEEMKSMYDKIHPDEVILVIDASIGQKAYDLASRFHQASPIGSLIVSKMDGTAKGGGALS 257
Query: 262 AVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQ 321
AV AT + + FIGTGE +DE EVF+ + FVSRLLG+GD ++KI V + + ++
Sbjct: 258 AVIATGAQIKFIGTGEKLDELEVFNPRRFVSRLLGLGDIESIIEKIKSVEDYENLEKRME 317
Query: 322 KLSEGN--FTLRIMYEQFQNILKMGPIGQVFSMLPGFSS-ELMPKGREKESQAKIKRYMT 378
+ G TLR +Y+Q + KMGP+G++F MLPG +P+ + K + KI+ +M
Sbjct: 318 DVISGKTKLTLRDIYKQLIALRKMGPLGKIFQMLPGAGILSQVPEEQLKLGEEKIRTFMA 377
Query: 379 MMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYK---RLAKIWSKMKGL 435
+M+SMT +ELD NP +++ +R+ RIA+G+G V EV E+L++Y+ L K+ + KGL
Sbjct: 378 IMNSMTYKELD--NPSIIDKARMRRIAKGAGVTVEEVKELLKQYQMTNNLLKMVKRRKGL 435
>gi|172048109|sp|A5UMY7.2|SRP54_METS3 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
Length = 445
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 187/455 (41%), Positives = 275/455 (60%), Gaps = 12/455 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG ++++ ++++ ++ID+K + E + EI RAL+Q+DV LV ++ IKK
Sbjct: 1 MLGNLGENLTKTMKKLVGISVIDKKTIEEVVKEIQRALIQSDVNIALVLDLSKKIKKRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G R + I+ E+ +L P KP I+F+GLQGSGKTTT K
Sbjct: 61 EEEPPKGITPREHVITIIYEEMVNLLGGEAPGLDIDV-KPYKILFLGLQGSGKTTTIGKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
Y QKKG+ PA+VC DT+R A++QL+Q + ++P YG D + +A +G++ FK
Sbjct: 120 CRYLQKKGFNPAVVCTDTWRPAAYEQLRQLTEEMQVPLYGDPDNKDALDLAQKGLKEFK- 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
N +II DT+GRHKQE L EM + + P I V+D +IGQ A +QA+AF Q+
Sbjct: 179 -NRKVIIFDTAGRHKQEEDLIAEMDTLDDIIQPTESILVIDGTIGQQAGEQAKAFSQATD 237
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+DG AKGGGA+SAVA T +P+ FIGTGE +D+FE+FD F+SRLLGMGD
Sbjct: 238 VGSIIITKLDGSAKGGGAMSAVAETGAPIKFIGTGERIDDFELFDPARFISRLLGMGDIQ 297
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
++K + + D + ++ + G FTL M QF+ + MGP+ QV SM+PG +++
Sbjct: 298 TLIEKAEDSIDEDMAEKTMKNMMSGKFTLVDMKNQFEMMNSMGPMQQVLSMIPGLGNKV- 356
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
K K ++ KI Y +M SMT +E++ NPKL+ SRI RIA G+G + EV ++L+
Sbjct: 357 SKEASKMTEDKIDGYKVIMSSMTKKEME--NPKLIKQSRIRRIAMGAGVEESEVRDLLKY 414
Query: 422 YKRLAKIWSKMKGLKIPKKGEMSALSRN-MNAQHM 455
Y K MKG I K+G S N M Q M
Sbjct: 415 YNNTKKT---MKG--IGKRGRFGNNSMNRMMGQFM 444
>gi|147919502|ref|YP_686758.1| signal recognition particle protein Srp54 [Methanocella arvoryzae
MRE50]
gi|121687852|sp|Q0W2G1.1|SRP54_UNCMA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|110622154|emb|CAJ37432.1| signal recognition particle [Methanocella arvoryzae MRE50]
Length = 444
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/429 (42%), Positives = 266/429 (62%), Gaps = 13/429 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ A+++++N+ ID++V++E + +I RA++QADV KLV ++ + IK
Sbjct: 1 MVLDNLGTSLKDALRKIANSGKIDKEVIDEVVKDIQRAMIQADVNVKLVMKLSSTIKNRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG N + + + ++ EL ++ GK TP + IM VGLQGSGKTTT K
Sbjct: 61 LTEAPPAGMNSKEHVLRIVYTELVNIV--GKA--TPVALQSQTIMMVGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +KG KPA++CADT+R GA+DQLKQ K + FYG D V I G++
Sbjct: 117 IARYFARKGLKPAVICADTYRPGAYDQLKQLCDKLGVGFYGEAGNKDAVAIVRNGLKEMA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+ IVDT+GRH E L +EM+ + T D + V+D++IGQ A +QA+AF ++
Sbjct: 177 K--YDVKIVDTAGRHALETDLIQEMKDIYGLTKFDHKLLVLDAAIGQQASEQARAFNDAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGALSAV+ T + + FIG GE D+ E FD F+SRLLGMGD
Sbjct: 235 GITGVVITKLDGTAKGGGALSAVSDTNTSIAFIGVGETPDDMERFDPDGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFSS 358
+++ +EV+ D ++K+ +G FTL MY+Q + I KMGP+ Q+ SMLP G
Sbjct: 295 RALVERANEVLQKDDVN--VEKMMQGKFTLNDMYDQLEAINKMGPLKQIMSMLPLGGLGG 352
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
+ K +Q K+K Y +MDSMT E D +PKL+ SRI R+A GSG+ EV E+
Sbjct: 353 NITDD-MYKMTQDKLKGYKVIMDSMTAAERD--DPKLIGSSRIARVAHGSGKSPEEVREL 409
Query: 419 LEEYKRLAK 427
L+ +K + K
Sbjct: 410 LKYHKMMQK 418
>gi|148643420|ref|YP_001273933.1| signal recognition particle protein Srp54 [Methanobrevibacter
smithii ATCC 35061]
gi|222445662|ref|ZP_03608177.1| hypothetical protein METSMIALI_01303 [Methanobrevibacter smithii
DSM 2375]
gi|288869608|ref|ZP_05975207.2| signal recognition particle protein [Methanobrevibacter smithii DSM
2374]
gi|148552437|gb|ABQ87565.1| signal recognition particle GTPase SRP54 [Methanobrevibacter
smithii ATCC 35061]
gi|222435227|gb|EEE42392.1| Signal peptide binding domain protein [Methanobrevibacter smithii
DSM 2375]
gi|288860574|gb|EFC92872.1| signal recognition particle protein [Methanobrevibacter smithii DSM
2374]
Length = 447
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/455 (41%), Positives = 275/455 (60%), Gaps = 12/455 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG ++++ ++++ ++ID+K + E + EI RAL+Q+DV LV ++ IKK
Sbjct: 3 MLGNLGENLTKTMKKLVGISVIDKKTIEEVVKEIQRALIQSDVNIALVLDLSKKIKKRAL 62
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G R + I+ E+ +L P KP I+F+GLQGSGKTTT K
Sbjct: 63 EEEPPKGITPREHVITIIYEEMVNLLGGEAPGLDIDV-KPYKILFLGLQGSGKTTTIGKL 121
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
Y QKKG+ PA+VC DT+R A++QL+Q + ++P YG D + +A +G++ FK
Sbjct: 122 CRYLQKKGFNPAVVCTDTWRPAAYEQLRQLTEEMQVPLYGDPDNKDALDLAQKGLKEFK- 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
N +II DT+GRHKQE L EM + + P I V+D +IGQ A +QA+AF Q+
Sbjct: 181 -NRKVIIFDTAGRHKQEEDLIAEMDTLDDIIQPTESILVIDGTIGQQAGEQAKAFSQATD 239
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+DG AKGGGA+SAVA T +P+ FIGTGE +D+FE+FD F+SRLLGMGD
Sbjct: 240 VGSIIITKLDGSAKGGGAMSAVAETGAPIKFIGTGERIDDFELFDPARFISRLLGMGDIQ 299
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
++K + + D + ++ + G FTL M QF+ + MGP+ QV SM+PG +++
Sbjct: 300 TLIEKAEDSIDEDMAEKTMKNMMSGKFTLVDMKNQFEMMNSMGPMQQVLSMIPGLGNKV- 358
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
K K ++ KI Y +M SMT +E++ NPKL+ SRI RIA G+G + EV ++L+
Sbjct: 359 SKEASKMTEDKIDGYKVIMSSMTKKEME--NPKLIKQSRIRRIAMGAGVEESEVRDLLKY 416
Query: 422 YKRLAKIWSKMKGLKIPKKGEMSALSRN-MNAQHM 455
Y K MKG I K+G S N M Q M
Sbjct: 417 YNNTKKT---MKG--IGKRGRFGNNSMNRMMGQFM 446
>gi|330507723|ref|YP_004384151.1| signal sequence recognition 54 kDa protein [Methanosaeta concilii
GP6]
gi|328928531|gb|AEB68333.1| Signal sequence recognition 54 kDa protein [Methanosaeta concilii
GP6]
Length = 445
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 186/436 (42%), Positives = 271/436 (62%), Gaps = 13/436 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LGGS+ A++++++A ID+ +++E + EI RALLQADV KLV ++ IK
Sbjct: 1 MVLDNLGGSLRNALKKIASANKIDKALVDEAVREIQRALLQADVNVKLVMQLSNTIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G N R + ++ EL ++ G+ + P K + IM VGLQGSGKTTT K
Sbjct: 61 LDEKPAPGMNPREHVINIVYQELINLV--GRGADIPLKKQN--IMLVGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + Q+KG + A++CADTFRAGA+DQLK K I FYG +D +A G+E K
Sbjct: 117 LATFFQRKGLRTAVICADTFRAGAYDQLKALCEKQGIFFYGEKGNTDAPAVARNGLEATK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+ IVDT+GRH E L +EM+ + N D + VMD+++GQ A +QA+AF ++V
Sbjct: 177 K--YDIRIVDTAGRHALEGDLIQEMKDIHAVVNADQKLLVMDAALGQQASEQAKAFNEAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
++ VI+TK+DG AKGGGALSAVA TK+ V FIG GE + E F+ F+SR+LGMGD
Sbjct: 235 NITGVIITKLDGTAKGGGALSAVAETKTSVAFIGVGETPADLERFEADRFISRMLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFSS 358
+++ EV +Q ++ L G FTL+ MY+Q + + K+GP+ Q+ MLP G
Sbjct: 295 KTLIERAQEV--QTEQEVDVESLMRGKFTLKDMYQQMEAMNKLGPLKQIMQMLPMGGLGF 352
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
EL K + ++ ++ +Y +MDSMT ELD +PK++ SRI RI++GSG V E+
Sbjct: 353 ELSDK-EYQMTKDRLDKYRVVMDSMTAAELD--DPKIITASRIKRISQGSGASPDLVREL 409
Query: 419 LEEYKRLAKIWSKMKG 434
L+ ++ + K M+G
Sbjct: 410 LKSHQAMQKALKGMRG 425
>gi|288559422|ref|YP_003422908.1| signal recognition particle SRP54 protein [Methanobrevibacter
ruminantium M1]
gi|288542132|gb|ADC46016.1| signal recognition particle SRP54 protein [Methanobrevibacter
ruminantium M1]
Length = 444
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 174/426 (40%), Positives = 267/426 (62%), Gaps = 6/426 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG +++ +++++ ++ID+KV+ E + +I RAL+Q+DV +LV ++ I+K
Sbjct: 1 MLGSLGENLTNTMKKLAGMSVIDKKVIKEVVKDIQRALIQSDVNIQLVLKLSKTIEKRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G R + I+ E+ +L + KP I+F+GLQGSGKTTT K
Sbjct: 61 EEEPPKGITPREHVITIIYEEMVNLLGSEAQELKITE-KPFKILFLGLQGSGKTTTIGKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
Y Q+KG+ PA+VC DT+R A++QLKQ + +I YG D + +A +G++ FK
Sbjct: 120 CRYLQRKGFSPAVVCTDTWRPAAYEQLKQLTEEMQIQLYGDPDNKDALDLAEKGLKHFK- 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
N +II DT+GRHK E L EEM ++ + NP + V+D++IGQ A +QA+AF Q+
Sbjct: 179 -NQKIIIFDTAGRHKNEEDLIEEMNKLDKIINPSESMLVIDATIGQQAGEQAKAFSQATD 237
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G++I++K+DG AKGGGALSAVA T +P+ FIGTGE +D+FE FD + F+SRLLGMGD
Sbjct: 238 IGSIIISKLDGTAKGGGALSAVAETGAPIKFIGTGEGIDDFEAFDPERFISRLLGMGDIR 297
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
++K EV+ D+ + + + G FTL M QF+ + MGP+ QV +M+PG ++
Sbjct: 298 SLIEKAEEVIDEDEATKTMNNMLSGKFTLVDMRSQFEMMNSMGPMQQVMNMIPGLGGKI- 356
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
PK + ++ KI + +M SMT EE+ NPK++ SRI RIARG+G + +V E+L
Sbjct: 357 PKEASQMTEDKINGFKIIMSSMTEEEM--LNPKIIKQSRIQRIARGAGVEESDVKELLRY 414
Query: 422 YKRLAK 427
Y K
Sbjct: 415 YNNTKK 420
>gi|15679321|ref|NP_276438.1| signal recognition particle protein Srp54 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3334341|sp|O27376.1|SRP54_METTH RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|2622427|gb|AAB85799.1| signal recognition particle protein SRP54 [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 442
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 187/440 (42%), Positives = 273/440 (62%), Gaps = 10/440 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+S+ +++++ TI+DE+V+ E + +I RAL+Q+DV KLV + +I++
Sbjct: 1 MLGNLGRSLSKTMKKLAGMTIVDEEVVREVIKDIQRALIQSDVNIKLVFNLSKSIEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + I +++E+ K+L KP I+F+GLQGSGKTTT K
Sbjct: 61 NEEPPKGITPKEHIISIVYDEMVKLLGEKSHELVIDD-KPYRILFLGLQGSGKTTTIGKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y +KKG+ +VC DT+R A +QLKQ + YG D + +A +G+ F+K
Sbjct: 120 ARYLRKKGFTVGVVCTDTWRPAALEQLKQYTEGQDVSIYGDPQNRDALDLAEKGLARFQK 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ D+II DT+GRHK+E L EM ++S P I V+D +IGQ A +QA AF+++
Sbjct: 180 K--DVIIFDTAGRHKEEKDLLREMEELSAIVEPHEAILVIDGTIGQQAREQALAFRKATD 237
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G++IVTK+DG AKGGGALSAVA +P+ FIGTGE +D+ EVFD + F+SRLLGMGD
Sbjct: 238 IGSIIVTKLDGSAKGGGALSAVAEIGAPIKFIGTGERIDDLEVFDPERFISRLLGMGDLR 297
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
++K+ EV + E L + G FTLR M QF+ + KMGP+ QV SMLPG +
Sbjct: 298 SLLEKVEEVSEEEIAEESLDAILSGKFTLRDMRVQFEMMGKMGPLQQVMSMLPGAGK--L 355
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
PK + ++ I++Y+ +MDSMT EEL+ P ++ SRI RIARGSG + +V E+L+
Sbjct: 356 PKDASRMTEETIRKYLIIMDSMTEEELE--KPDIIKHSRIRRIARGSGTRNEDVKELLKY 413
Query: 422 YKRLAKIWSKMKGLKIPKKG 441
Y+ K MKGL K G
Sbjct: 414 YRVTKK---AMKGLGRRKMG 430
>gi|60623872|ref|NP_377232.2| signal recognition particle protein [Sulfolobus tokodaii str. 7]
gi|28380160|sp|Q971S9.2|SRP54_SULTO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|342306424|dbj|BAK54513.1| signal recognition particle 54 kDa protein [Sulfolobus tokodaii
str. 7]
Length = 445
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 182/420 (43%), Positives = 262/420 (62%), Gaps = 12/420 (2%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
+K +N+ + E+ +L+++DV KLV + IK + + +R +++EL
Sbjct: 19 DKAVNDFIKELQISLIKSDVNVKLVSNLTQKIKDRLEKEKPPTAIERREWFISIVYDELS 78
Query: 85 KMLDPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
K+ P PKK P VIM VG+QGSGKTTT K A +++KKG+K LV AD +R
Sbjct: 79 KLFGGDINPEVMPKK-IPYVIMLVGVQGSGKTTTAGKLALFYKKKGYKVGLVAADVYRPA 137
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK--QEAAL 201
A+DQL Q + +P YG +D V IA GVE F E D+IIVDT+GRH +E L
Sbjct: 138 AYDQLVQIGKQINVPVYGEPNNTDAVGIAKRGVEKFLSEKYDIIIVDTAGRHGYGEEVKL 197
Query: 202 FEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALS 261
EEM+ + PD VI V+D+SIGQ A+D A F Q+ +G++IVTKMDG AKGGGALS
Sbjct: 198 LEEMKNMYSEIKPDEVILVIDASIGQKAYDLASRFHQASPIGSIIVTKMDGTAKGGGALS 257
Query: 262 AVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQ 321
AVAAT + + FIGTGE +DE EVF+ + FVSR+LGMGD ++KI + +Q + ++
Sbjct: 258 AVAATGAAIKFIGTGEKLDELEVFNPRRFVSRILGMGDIESIIEKIKGMEEYEQIQKKME 317
Query: 322 KLSEG--NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS-ELMPKGREKESQAKIKRYMT 378
++ G TLR +Y+Q + KMGP+ ++ MLPGF +P+ + K + KIK+++
Sbjct: 318 EVMSGKAKLTLRDIYKQLTALRKMGPLNKILQMLPGFGVFSQIPEEQLKLGEEKIKKFLV 377
Query: 379 MMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYK---RLAKIWSKMKGL 435
+M+SMT +ELD NP +++ SRI RIA+GSG EV E+L++Y+ L K+ + KGL
Sbjct: 378 IMNSMTYKELD--NPSIIDKSRIRRIAKGSGTSPEEVKELLKQYQVTNNLLKMVKRRKGL 435
>gi|387594285|gb|EIJ89309.1| signal recognition particle 54 kDa subunit [Nematocida parisii
ERTm3]
gi|387595031|gb|EIJ92658.1| signal recognition particle 54 kDa subunit [Nematocida parisii
ERTm1]
Length = 477
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 176/433 (40%), Positives = 273/433 (63%), Gaps = 10/433 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L+ LG IS A+ + EK LN+ + +IT +LL ++V ++V ++ I +
Sbjct: 1 MLSDLGAGISNALHGFFGSKE-GEKELNDAIKKITTSLLGSNVNTRVVLNVRKRILERFK 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ K + +Q+ +F ELC ++D GK F PKK + S ++FVGLQGSGKTTTC KY
Sbjct: 60 PHEIPTKSAKEKALQRIVFEELCAIMDSGKEPFKPKKKEVSTVLFVGLQGSGKTTTCCKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y++++G+K +VCADTFRAGA++Q+KQN I + S + DP +A G K+
Sbjct: 120 AKYYKQRGFKVGIVCADTFRAGAYEQVKQNVQGMNIEVFISDSSVDPAVVAKTGASALKE 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
C+L++VDTSGRH QE LF+EM ++ EA NP IFV+D+SIGQ A A++F V
Sbjct: 180 SGCNLVLVDTSGRHTQEGELFKEMEEIVEAINPTATIFVVDASIGQTAETHARSFMSRVK 239
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G+VI+TK DG GGAL +VA TK+PV FIGTGE M + E F+ K FV RL+G+GD S
Sbjct: 240 LGSVIITKTDGTKNIGGALCSVAETKTPVAFIGTGEGMTQIESFNPKGFVGRLMGLGDIS 299
Query: 302 GFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
F +KI + + ++Q EL+ K+ G F++ Y+Q++ IL++GPIGQ+ S++PG +S +
Sbjct: 300 SFAEKIEGLNISPEKQEELIGKIKAGEFSIGDFYDQYKKILELGPIGQLLSLIPGMNSSM 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 419
EKE K+ + +MT +EL ++ + R++R+A+G G +V + +
Sbjct: 360 F---NEKE----FKKMGVIFTAMTKKELKTNGEVFIRSLPRLIRVAKGCGATPTQVRDAI 412
Query: 420 EEYKRLAKIWSKM 432
Y+ +A+++ K+
Sbjct: 413 NTYRMMAQMFQKI 425
>gi|224154027|ref|XP_002337428.1| predicted protein [Populus trichocarpa]
gi|222839177|gb|EEE77528.1| predicted protein [Populus trichocarpa]
Length = 162
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 153/161 (95%), Positives = 158/161 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRAIQQMSNATIIDEK LN+CLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQAIFNELCK+LDPGK SFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAIFNELCKILDPGKSSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG 161
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG 161
>gi|294495522|ref|YP_003542015.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanohalophilus mahii DSM 5219]
gi|292666521|gb|ADE36370.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanohalophilus mahii DSM 5219]
Length = 439
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/438 (41%), Positives = 268/438 (61%), Gaps = 13/438 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +L S+ A++++ A IDE+ +N+ + +I RALLQ+DV K+V ++ +IK+
Sbjct: 1 MVMDKLSNSLQDALKKLVGAGRIDERTVNDVVKDIQRALLQSDVNVKMVMQLSKSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+D+ G N R + + ++ EL K++ G T KP IM +GLQGSGKTTT K
Sbjct: 61 LDEDVPQGMNPREHVIRIVYEELMKIVGEG----TDIPLKPQKIMMIGLQGSGKTTTTAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG KPA+VCADTFR GA+ QLK + FYG D V I G+
Sbjct: 117 LARYFQRKGLKPAVVCADTFRPGAYQQLKTLCESLNVAFYGEEGNPDAVGIVERGLAEID 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+ I+DT+GRH E+ L +EM ++ ++PD + V+D+ IGQ A +QA+AF SV
Sbjct: 177 K--YDVKIIDTAGRHSLESDLIDEMERIHAISSPDYKLLVLDAGIGQQASEQAKAFNDSV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V+++K+DG AKGGGA+SAVAAT S + FIG GE + E F+ F+SRLLGMGD
Sbjct: 235 GISGVVISKLDGTAKGGGAMSAVAATDSSIAFIGVGETPQDLEKFEADRFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFSS 358
M+K E + D+ ++ + +G FTL+ MY+Q + + KMGP+ Q+ MLP G
Sbjct: 295 RSLMEKAEESLSEDELD--VESMMKGKFTLKDMYKQLEAMNKMGPMKQIMQMLPLGGMGM 352
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
++ + E Q K+ +Y T+MDSMT EE+ +NP+++ SRI RI+ G+G V E+
Sbjct: 353 KVSDEDYEVTGQ-KMAQYKTLMDSMTEEEM--TNPRIIGSSRIKRISIGAGSNPETVREL 409
Query: 419 LEEYKRLAKIWSKMKGLK 436
L+ +K++ M+G K
Sbjct: 410 LKYHKQMQNAMKGMRGGK 427
>gi|332797104|ref|YP_004458604.1| GTP-binding signal recognition particle SRP54 G-domain-containing
protein [Acidianus hospitalis W1]
gi|332694839|gb|AEE94306.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Acidianus hospitalis W1]
Length = 449
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 176/431 (40%), Positives = 269/431 (62%), Gaps = 9/431 (2%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
++ A+++ + +K + + + E+ ++L+ ADV KLV + IK+ + +
Sbjct: 4 NLRDAVRKFLTGSSSYDKAVEDFIKELQKSLISADVNVKLVFSLTNKIKERLKNEKPPTY 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
+R + +++EL + K P P K P VIM VG+QG+GKTTT K AY+++K
Sbjct: 64 IERREWFIKIVYDELSNLFGGDKEPKVIPDK-IPYVIMLVGVQGTGKTTTAGKLAYFYKK 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
KG+K LV AD +R A +QL+Q + +P YG E D V IA GVE F E ++I
Sbjct: 123 KGFKVGLVGADVYRPAALEQLQQLGEQIGVPVYGEPGEKDAVGIAKRGVEKFLNEKMEII 182
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +EAAL EEM+ + EA PD V V+D+SIGQ A+D A F Q+ +G +
Sbjct: 183 IVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASKFNQASKIGTI 242
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAVAAT + + FIGTGE +DE EVF+ + FV+R+LGMGD ++
Sbjct: 243 IITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEVFNPRRFVARILGMGDIETILE 302
Query: 306 KIHEVVPMDQQPELLQKL--SEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS-ELMP 362
KI EV D+ + ++++ +G TLR +Y Q + KMGP+ ++F +LPG +P
Sbjct: 303 KIKEVENYDKMQKKMEEVISGKGKLTLRDVYNQLIALRKMGPLSKLFQLLPGIGMLGQIP 362
Query: 363 KGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY 422
+ + K + K+++++ +M+SMT EELD NP +++ SR+ RIA GSG ++ +V E++E Y
Sbjct: 363 EDQLKVGEEKMRKWLAIMNSMTYEELD--NPSIIDKSRMRRIALGSGTEIEDVKELIEHY 420
Query: 423 KRLAKIWSKMK 433
+ + +K
Sbjct: 421 NLMQRTIKMLK 431
>gi|229579027|ref|YP_002837425.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Sulfolobus islandicus Y.G.57.14]
gi|284997634|ref|YP_003419401.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Sulfolobus islandicus L.D.8.5]
gi|259511388|sp|C3NDW4.1|SRP54_SULIY RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|228009741|gb|ACP45503.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Sulfolobus islandicus Y.G.57.14]
gi|284445529|gb|ADB87031.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Sulfolobus islandicus L.D.8.5]
Length = 447
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 174/433 (40%), Positives = 271/433 (62%), Gaps = 12/433 (2%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + E+ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTGSTPYEKAVDEFIKELQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY++++
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKR 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + +P YG + + IA +GV+TF K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDII 182
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +E L EEM+++ EA PD VI V+D+SIGQ A+D A F Q+ +G++
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSI 242
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAVAAT + + FIGTGE +DE E+F+ K +VSR+LGMGD ++
Sbjct: 243 IITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESILE 302
Query: 306 KIHEVVPMDQQPELLQKLSE--GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPK 363
K+ + ++ + ++ + E G TLR +Y Q + KMGP+ +V +PG ++P
Sbjct: 303 KVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKVLQHIPGLGV-MLPT 361
Query: 364 GRE---KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
E K + KI+R++ ++SMT +EL+ NP +++ SR+ RIA GSG +V +V E+LE
Sbjct: 362 PSEDQLKLGEEKIRRWLAALNSMTYKELE--NPSIIDKSRMRRIAEGSGLEVEDVRELLE 419
Query: 421 EYKRLAKIWSKMK 433
Y + K+ +K
Sbjct: 420 WYNNMNKLLKMVK 432
>gi|21227369|ref|NP_633291.1| signal recognition particle protein Srp54 [Methanosarcina mazei
Go1]
gi|23822172|sp|Q8PXF3.1|SRP54_METMA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|20905728|gb|AAM30963.1| signal recognition particle subunit FFH/SRP54 [Methanosarcina mazei
Go1]
Length = 443
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 189/445 (42%), Positives = 265/445 (59%), Gaps = 24/445 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ A IDE+ +NE + +I RALLQADV KLV M IK+
Sbjct: 1 MVMEKLGDSLQGALKKLIGAGRIDERTVNEVVKDIQRALLQADVNVKLVMGMSQRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+D AG N R + + ++ EL +++ G + KP IM VGLQGSGKTT+ K
Sbjct: 61 MKEDPPAGMNPREHVIRIVYQELMEIIGKG----ADIQLKPQTIMMVGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG K +V ADTFR GA+ QLK + K + FYG D V I + G++
Sbjct: 117 LARYFQRKGLKAGVVAADTFRPGAYHQLKTLSEKLNVGFYGEEGNPDAVEITIHGLKAL- 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ IVDT+GRH EA L EEM ++ PD V+D+ IGQ A QA AF SV
Sbjct: 176 -EKYDIKIVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG AKGGGALSAV+ TK+P+ FIG GE ++FE F+ F+SRLLGMGD
Sbjct: 235 GITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG----- 355
M+K E + ++ ++ L +G FTL+ MY+Q + + KMGP+ Q+ SMLP
Sbjct: 295 KSLMEKAEE--SLSEEDVNVEALMQGRFTLKDMYKQLEAMNKMGPLKQIMSMLPMGMGGL 352
Query: 356 ----FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
S E+ + + K+K Y +MDSMT +E+ ++PKL+ SRI RI+RGSG
Sbjct: 353 GGVKLSDEMF-----QATSDKMKNYKVIMDSMTEDEM--ADPKLIGGSRIKRISRGSGCS 405
Query: 412 VREVMEMLEEYKRLAKIWSKMKGLK 436
+V E+L+ +K + +G K
Sbjct: 406 PEDVRELLKYHKTMQTALKGFRGGK 430
>gi|227827525|ref|YP_002829305.1| GTP-binding signal recognition particle SRP54 G-domain-containing
protein [Sulfolobus islandicus M.14.25]
gi|229584728|ref|YP_002843230.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus M.16.27]
gi|238619682|ref|YP_002914508.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus M.16.4]
gi|385773194|ref|YP_005645760.1| GTP-binding signal recognition particle SRP54, G-domain [Sulfolobus
islandicus HVE10/4]
gi|385775828|ref|YP_005648396.1| GTP-binding signal recognition particle SRP54 G-domain-containing
protein [Sulfolobus islandicus REY15A]
gi|259511383|sp|C3N5B0.1|SRP54_SULIA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|259511384|sp|C4KGX6.1|SRP54_SULIK RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|259511386|sp|C3MYM8.1|SRP54_SULIM RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|227459321|gb|ACP38007.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Sulfolobus islandicus M.14.25]
gi|228019778|gb|ACP55185.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus M.16.27]
gi|238380752|gb|ACR41840.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus M.16.4]
gi|323474576|gb|ADX85182.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Sulfolobus islandicus REY15A]
gi|323477308|gb|ADX82546.1| GTP-binding signal recognition particle SRP54, G-domain [Sulfolobus
islandicus HVE10/4]
Length = 447
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 174/433 (40%), Positives = 271/433 (62%), Gaps = 12/433 (2%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + E+ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTGSTPYEKAVDEFVKELQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY++++
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTSGKLAYFYKR 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + +P YG + + IA +GV+TF K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDII 182
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +E L EEM+++ EA PD VI V+D+SIGQ A+D A F Q+ +G++
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSI 242
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAVAAT + + FIGTGE +DE E+F+ K +VSR+LGMGD ++
Sbjct: 243 IITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESILE 302
Query: 306 KIHEVVPMDQQPELLQKLSE--GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPK 363
K+ + ++ + ++ + E G TLR +Y Q + KMGP+ +V +PG ++P
Sbjct: 303 KVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKVLQHIPGLGV-MLPT 361
Query: 364 GRE---KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
E K + KI+R++ ++SMT +EL+ NP +++ SR+ RIA GSG +V +V E+LE
Sbjct: 362 PSEDQLKLGEEKIRRWLAALNSMTYKELE--NPSIIDKSRMRRIAEGSGLEVEDVRELLE 419
Query: 421 EYKRLAKIWSKMK 433
Y + K+ +K
Sbjct: 420 WYNNMNKLLKMVK 432
>gi|452209852|ref|YP_007489966.1| Signal recognition particle, subunit Ffh SRP54 [Methanosarcina
mazei Tuc01]
gi|452099754|gb|AGF96694.1| Signal recognition particle, subunit Ffh SRP54 [Methanosarcina
mazei Tuc01]
Length = 443
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 189/445 (42%), Positives = 265/445 (59%), Gaps = 24/445 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ A IDE+ +NE + +I RALLQADV KLV M IK+
Sbjct: 1 MVMEKLGDSLQGALKKLIGAGRIDERTVNEVVKDIQRALLQADVNVKLVMGMSQRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+D AG N R + + ++ EL +++ G + KP IM VGLQGSGKTT+ K
Sbjct: 61 MKEDPPAGMNPREHVIRIVYQELMEIIGKG----ADIQLKPQTIMMVGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG K +V ADTFR GA+ QLK + K + FYG D V I + G++ +
Sbjct: 117 LARYFQRKGLKAGVVAADTFRPGAYHQLKTLSEKLNVGFYGEEGNPDAVEITIHGLKALE 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+ IVDT+GRH EA L EEM ++ PD V+D+ IGQ A QA AF SV
Sbjct: 177 K--YDIKIVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG AKGGGALSAV+ TK+P+ FIG GE ++FE F+ F+SRLLGMGD
Sbjct: 235 GITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG----- 355
M+K E + ++ ++ L +G FTL+ MY Q + + KMGP+ Q+ SMLP
Sbjct: 295 KSLMEKAEE--SLSEEDVNVEALMQGRFTLKDMYNQLEAMNKMGPLKQIMSMLPMGMGGL 352
Query: 356 ----FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
S E+ + + K+K Y +MDSMT +E+ ++PKL+ SRI RI+RGSG
Sbjct: 353 GGVKLSDEMF-----QATSDKMKNYKVIMDSMTEDEM--ADPKLIGGSRIKRISRGSGCS 405
Query: 412 VREVMEMLEEYKRLAKIWSKMKGLK 436
+V E+L+ +K + +G K
Sbjct: 406 PEDVRELLKYHKTMQTALKGFRGGK 430
>gi|229582222|ref|YP_002840621.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus Y.N.15.51]
gi|259511387|sp|C3NHT9.1|SRP54_SULIN RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|228012938|gb|ACP48699.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus Y.N.15.51]
Length = 447
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 174/433 (40%), Positives = 271/433 (62%), Gaps = 12/433 (2%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + E+ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTRSTPYEKAVDEFIKELQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY++++
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKR 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + +P YG + + IA +GV+TF K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDII 182
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +E L EEM+++ EA PD VI V+D+SIGQ A+D A F Q+ +G++
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSI 242
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAVAAT + + FIGTGE +DE E+F+ K +VSR+LGMGD ++
Sbjct: 243 IITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESILE 302
Query: 306 KIHEVVPMDQQPELLQKLSE--GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPK 363
K+ + ++ + ++ + E G TLR +Y Q + KMGP+ +V +PG ++P
Sbjct: 303 KVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKVLQHIPGLGV-MLPT 361
Query: 364 GRE---KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
E K + KI+R++ ++SMT +EL+ NP +++ SR+ RIA GSG +V +V E+LE
Sbjct: 362 PSEDQLKLGEEKIRRWLAALNSMTYKELE--NPSIIDKSRMRRIAEGSGLEVEDVRELLE 419
Query: 421 EYKRLAKIWSKMK 433
Y + K+ +K
Sbjct: 420 WYNNMNKLLKMVK 432
>gi|124486290|ref|YP_001030906.1| signal recognition particle protein Srp54 [Methanocorpusculum
labreanum Z]
gi|166222334|sp|A2STI3.1|SRP54_METLZ RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|124363831|gb|ABN07639.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanocorpusculum labreanum Z]
Length = 446
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 181/435 (41%), Positives = 265/435 (60%), Gaps = 13/435 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L L S+ A+++++ T+ID ++E + ++ RALL +DV KLV E+ IK
Sbjct: 1 MGLDTLSNSLKDAMKKLAGKTVIDRAAVDELVRDLQRALLSSDVNVKLVMELSKQIKARS 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCT 119
+DL G N R + + ++ EL ++ GK + F+ K P I+ GLQGSGKTTT
Sbjct: 61 LDEDLPKGINAREHVLRIVYQELVNLV--GKEAEFSLK---PQKILMAGLQGSGKTTTTG 115
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K Y Q+KG K + AD FR GA+ QL+ K +P YG E D V+I +G+
Sbjct: 116 KLCRYFQRKGLKVGAIGADNFRPGAYAQLETLCKKINVPSYGDPKEKDAVKIVKDGLAAL 175
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + D+IIVDT+GRH E L +E+ QV+ NPD V+D+++GQAA DQA+ F ++
Sbjct: 176 K--DVDVIIVDTAGRHALEDDLIDEITQVNAYLNPDHRWLVIDAALGQAARDQAKRFHEA 233
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ + VIVTKMDG AKGGGA+SAVA T+S ++FIG GE +D+ E FD F+SRLLGMGD
Sbjct: 234 IGIDGVIVTKMDGTAKGGGAMSAVAETQSGIVFIGNGETIDDLERFDPNGFISRLLGMGD 293
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K E M+ + + + G FTL MY+Q + + KMGP+ QV SMLP +
Sbjct: 294 LKALVEKAEE--SMNAEDVDVNAMLRGKFTLNDMYKQLEAVQKMGPLKQVLSMLP-MGNM 350
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
+P + + K+K++ +MDSMT +ELD P L+N SR++R+A+GSG V EV +++
Sbjct: 351 NVPSDALEGTADKMKKFRIIMDSMTPQELDE--PALINTSRMIRVAKGSGSSVEEVRDLI 408
Query: 420 EEYKRLAKIWSKMKG 434
+ YK + K +G
Sbjct: 409 KYYKMMQKTLKGFRG 423
>gi|227830212|ref|YP_002831992.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Sulfolobus islandicus L.S.2.15]
gi|259511385|sp|C3MPN4.1|SRP54_SULIL RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|227456660|gb|ACP35347.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Sulfolobus islandicus L.S.2.15]
Length = 447
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 173/433 (39%), Positives = 271/433 (62%), Gaps = 12/433 (2%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + E+ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTGSTPYEKAVDEFIKELQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P + P +IM VG+QGSGKTTT K AY++++
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTR-LPFIIMLVGVQGSGKTTTAGKLAYFYKR 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + +P YG + + IA +GV+TF K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDII 182
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +E L EEM+++ EA PD VI V+D+SIGQ A+D A F Q+ +G++
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSI 242
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAVAAT + + FIGTGE +DE E+F+ K +VSR+LGMGD ++
Sbjct: 243 IITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESILE 302
Query: 306 KIHEVVPMDQQPELLQKLSE--GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPK 363
K+ + ++ + ++ + E G TLR +Y Q + KMGP+ +V +PG ++P
Sbjct: 303 KVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKVLQHIPGLGV-MLPT 361
Query: 364 GRE---KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
E K + KI+R++ ++SMT +EL+ NP +++ SR+ RIA GSG +V +V E+LE
Sbjct: 362 PSEDQLKLGEEKIRRWLAALNSMTYKELE--NPSIIDKSRMRRIAEGSGLEVEDVRELLE 419
Query: 421 EYKRLAKIWSKMK 433
Y + K+ +K
Sbjct: 420 WYNNMNKLLKMVK 432
>gi|432328008|ref|YP_007246152.1| signal recognition particle GTPase [Aciduliprofundum sp. MAR08-339]
gi|432134717|gb|AGB03986.1| signal recognition particle GTPase [Aciduliprofundum sp. MAR08-339]
Length = 449
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/453 (40%), Positives = 269/453 (59%), Gaps = 15/453 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ ++++S +DE ++ E + +I RALL+ADV+ L ++ N+++
Sbjct: 1 MLDSLGESLRNTLRKISKVGYVDESLIKEVVRDIQRALLKADVEVHLALKLSKNVERRAM 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ +G + R + + I+ EL +L K KP IM VGL G GKTTT K
Sbjct: 61 EEKPPSGMSHRDFLIKIIYEELVAILGREKEVAL----KPQKIMLVGLYGQGKTTTAGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y KKG ALV D R A++QLKQ + +P +G E D RIA E + ++
Sbjct: 117 AKYFHKKGLSVALVACDVHRPAAYEQLKQIGEQINVPVFGIPGEKDARRIASEAMRKIRE 176
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
I DTSGRH E L EE++ + E PD + VMD++IGQ A QA+AF +V
Sbjct: 177 AQVK--IFDTSGRHALEDDLIEEIKDLKEIIQPDEIFLVMDATIGQQAGKQAKAFHDAVG 234
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+ VI+TKMDG AKGGGALSAVAAT +PV+FIGTGEH+D+ E F+ F+SRLLGMGD
Sbjct: 235 ITGVIITKMDGSAKGGGALSAVAATGAPVVFIGTGEHLDDLEHFNPTRFISRLLGMGDLE 294
Query: 302 GFMDKIHEVVPMDQQ--PELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++ E + MD++ ++++K+ G F L+ MYE ++ + K G + ++ +P F
Sbjct: 295 TLLETAKE-LEMDEERAEKVMEKMMSGKFNLKDMYEIWEQMAKPGLLQKILYSIPFFKMG 353
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
+ K +ES+ K+KRY +MDSMT EEL+ NP+++ SRI RIARGSG+ +EV +L
Sbjct: 354 DIDKNMVEESEEKLKRYRIIMDSMTYEELE--NPEIIKASRIRRIARGSGKSEQEVRALL 411
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA 452
+EY R+ K +M+G + M AL R M +
Sbjct: 412 KEYHRMRKAMKQMRG----NRKLMRALRRQMKS 440
>gi|448417225|ref|ZP_21579243.1| signal recognition particle protein Srp54 [Halosarcina pallida JCM
14848]
gi|445678448|gb|ELZ30941.1| signal recognition particle protein Srp54 [Halosarcina pallida JCM
14848]
Length = 464
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/463 (38%), Positives = 279/463 (60%), Gaps = 25/463 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE ++E + EI R+LL ADV LV ++ ++I+
Sbjct: 1 MVLDNLGSSLRGSLDKLQGKSRLDEDDVDEIVREIQRSLLSADVDVSLVMDLSSSIEDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + P I+ GLQGSGKTTT K
Sbjct: 61 LHEEPPGGTSARDHVLKIVYEELVDLI--GESTDIPLE--PQTILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ KQ +A++ FYG E DPV+IA EG+E
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKQMCEEAEVEFYGDPDEEDPVKIAREGMEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E AL +E+ ++ NPD + V+D++IGQ A DQA+ F S+
Sbjct: 175 TEDADIHIVDTAGRHALEEALIDEIEEIERQVNPDRSMLVLDAAIGQGAKDQAREFDDSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVNETDSSIGFLGTGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQ------PELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ + Q+ PE + K G+FTL+ M +Q + + KMGP+ QV M+P
Sbjct: 295 KQLSERVERAMQETQEGEDDWDPEDIMK---GSFTLKDMQKQMEAMNKMGPLDQVLDMIP 351
Query: 355 ----GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 410
GF EL P +Q +++ + +MDSMT EEL+ NP+++ SR+ RIARGSG+
Sbjct: 352 GLGGGFKDEL-PDDAMDVTQDRMRSFDVIMDSMTEEELE--NPRIVGASRVRRIARGSGK 408
Query: 411 QVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQ 453
V E+LE++K + + + +G+ G+M + + + Q
Sbjct: 409 GEELVQELLEQHKMMERTIKQFQGM---GDGDMQRMMKKLQNQ 448
>gi|374633768|ref|ZP_09706133.1| signal recognition particle GTPase [Metallosphaera yellowstonensis
MK1]
gi|373523556|gb|EHP68476.1| signal recognition particle GTPase [Metallosphaera yellowstonensis
MK1]
Length = 447
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 176/432 (40%), Positives = 269/432 (62%), Gaps = 13/432 (3%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I A+++ T + ++E + ++ +AL+ +DVQ KLV + IK+ + +
Sbjct: 5 IRDAVRKFLGGTTSYDVAVDEFIKDLQKALISSDVQVKLVFSLTNKIKERLKKESPPTSL 64
Query: 70 NKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
+R + +++EL + K P P P VIM VG+QG+GKTTT K AY+++K+
Sbjct: 65 ERREWFIKIVYDELSSLFGGDKEPEVNPG-SLPYVIMLVGVQGTGKTTTAGKLAYFYKKR 123
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G+K ALV AD +R A +QL Q + +P YG E D V IA GVE E +LII
Sbjct: 124 GYKVALVGADVYRPAALEQLMQLGKQIGVPVYGEPGEKDAVGIAKRGVEKLLSEKYELII 183
Query: 189 VDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVI 246
VDT+GRH +EA L EEM+++ E+ P+ VI V+D+S+GQ A+D A+ F ++ VG++I
Sbjct: 184 VDTAGRHGYGEEAKLLEEMKEIYESVKPNEVILVIDASLGQKAYDLAKRFHEASKVGSII 243
Query: 247 VTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDK 306
+TKMDG AKGGGALSAV AT +P+ FIGTGE +DE EVF+ K FV+R+LGMGD ++K
Sbjct: 244 ITKMDGTAKGGGALSAVVATGAPIKFIGTGEKIDELEVFNPKRFVARVLGMGDVEAIIEK 303
Query: 307 IHEVVPMDQQPELLQKLSEG--NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM--- 361
I V + + +Q+++ G TLR +Y+Q + KMGP+ ++ ++PG + LM
Sbjct: 304 IKAVEDYEGIQKKMQEVTSGKSRLTLRDLYKQIIAMRKMGPLSKILQLMPGIN--LMGDI 361
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
P+ + K + K++R++ +M+SMT EELD NP L++ R+ RIA GSG +V EV E++E
Sbjct: 362 PEDQIKVGEKKMQRWLAIMNSMTYEELD--NPSLLDKQRMKRIAMGSGTEVEEVKELIEH 419
Query: 422 YKRLAKIWSKMK 433
+ + + +K
Sbjct: 420 FNTIQRTLKVLK 431
>gi|325957954|ref|YP_004289420.1| Signal recognition 54 kDa protein [Methanobacterium sp. AL-21]
gi|325329386|gb|ADZ08448.1| Signal recognition 54 kDa protein [Methanobacterium sp. AL-21]
Length = 447
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 266/422 (63%), Gaps = 6/422 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
++L LG ++++ +++++ IIDE+V+ E + +I RAL+Q+DV KLV + I+
Sbjct: 4 IMLGNLGKNLTKTMKKLAGMAIIDEEVVKEVIKDIQRALIQSDVNIKLVLNLSKTIEDRS 63
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ EL +L K +P I+F+GLQGSGKTT+ K
Sbjct: 64 LNEEPPKGVTPKEHVVRIVYEELVNLLGSSAQEVEIDK-RPYKILFMGLQGSGKTTSIGK 122
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
Y QKKG+ PA+V DT+R A++QL Q +P YG + D + +A G++ K
Sbjct: 123 LTKYLQKKGFNPAIVSTDTWRPAAYEQLLQLTEPMNVPVYGDHENKDALDLARTGLKAAK 182
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+IIVDT+GRHK+E+ L EM +S +PD VI V+D +IGQ A +QA AF +
Sbjct: 183 KN--DVIIVDTAGRHKEESDLLAEMESLSTIVDPDEVIMVIDGTIGQQAGEQALAFNNAT 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++I+TK+DG AKGGGALSAVA +P+ FIGTGE +++FE FD F+SRLLGMGD
Sbjct: 241 KIGSIIITKLDGSAKGGGALSAVAEIGAPIKFIGTGERVEDFEAFDPDRFISRLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+++ E+ + + + G FTL+ MY QF+ + KMGP+ QV +M+PG +L
Sbjct: 301 RTLLERAEEIAEEEGDMGSVDAMLSGKFTLKDMYSQFEMMNKMGPMQQVMNMIPGAGGKL 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
PK + ++ K+ +Y +MDSMT++EL+ +P+++ SR+ RIARGSG + +V E+L+
Sbjct: 361 -PKNASQVTEEKLSKYKILMDSMTDQELE--HPEVIKQSRVKRIARGSGMKNEDVKELLK 417
Query: 421 EY 422
Y
Sbjct: 418 YY 419
>gi|385806157|ref|YP_005842555.1| signal recognition 54 kDa protein [Fervidicoccus fontis Kam940]
gi|383796020|gb|AFH43103.1| signal recognition 54 kDa protein [Fervidicoccus fontis Kam940]
Length = 453
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 167/436 (38%), Positives = 274/436 (62%), Gaps = 7/436 (1%)
Query: 3 LAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNL 62
++ + I AI++ ++T E+ + E + E+ R L+++DV K+V E + I+K
Sbjct: 1 MSNIFSGIKEAIKKFLSSTSPYEQSVEEFIRELQRILIKSDVNVKVVFEFTSKIRKRALE 60
Query: 63 DDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYA 122
+ G ++R + ++ EL +L + K KP VIM VG+QGSGKTTT K A
Sbjct: 61 EKPPQGVSRRDWFIKIVYEELISLLGGEEELNVLPKKKPYVIMLVGVQGSGKTTTAAKLA 120
Query: 123 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKE 182
+Y++ +G++ L+ ADTFRAGA++QLKQ A K + F+G +DP I+ +G+E +
Sbjct: 121 WYYKNRGYRVGLIAADTFRAGAYEQLKQLAEKVGVEFWGDKGLNDPAEISRKGLEYHLSK 180
Query: 183 NCDLIIVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
++II+DT+GRH +E+ L +EM+ +++A PD VI V+D+SIGQ A+D A+ F ++
Sbjct: 181 KAEIIIIDTAGRHGYGEESKLIDEMKAIADAVKPDEVILVLDASIGQKAYDLAKKFHEAT 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++I+TK+DG AKGGGA+SA+AAT + V F+GTGE +DE E F K F SR+LGMGD
Sbjct: 241 PIGSIIITKLDGTAKGGGAISAIAATGAKVKFVGTGEKVDEIEPFRPKNFASRILGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+++++ + ++ E+ L GN ++++Y+Q + I MGPIG++ M+PG S L
Sbjct: 301 EAILERVYSTMSQNELEEMADSLMSGNLNMKLIYKQIKQIRSMGPIGKILRMIPGLSMSL 360
Query: 361 -MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM--NDSRIMRIARGSGRQVREVME 417
+G K S+ K+ ++ +++SMT EE++ P+L+ SRI RIA G+G +V E
Sbjct: 361 PEDEGALKVSEKKMDMWLNIINSMTYEEME--KPELLEREKSRIRRIAIGAGVAQEDVRE 418
Query: 418 MLEEYKRLAKIWSKMK 433
+L Y + K+ ++K
Sbjct: 419 LLNYYNYIKKLLKQLK 434
>gi|84490317|ref|YP_448549.1| signal recognition particle protein Srp54 [Methanosphaera
stadtmanae DSM 3091]
gi|121731822|sp|Q2NE47.1|SRP54_METST RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|84373636|gb|ABC57906.1| signal recognition particle, 54 kDa protein [Methanosphaera
stadtmanae DSM 3091]
Length = 444
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/450 (39%), Positives = 275/450 (61%), Gaps = 9/450 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+++ +++++ +IID+K L + +I RAL+Q+DV K+V + I+K
Sbjct: 1 MLEGLSESLTQTMKKLAGMSIIDKKTLKDVTKDIQRALIQSDVNVKVVFGLTKKIEKRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++L G + + + + ++ EL ++ KP KP IM +GLQGSGKTTT K
Sbjct: 61 EEELPKGLSPKEHVMRIVYQELVNLIGE-KPEELKINRKPYKIMMLGLQGSGKTTTTAKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
+ +KKG A+VC DT+R A++QL+Q +P +G D + +A +G+E
Sbjct: 120 VKHLKKKGHTSAIVCTDTWRPAAYEQLRQLTEPLDVPVFGDPENKDAIDLAKKGLEKCGS 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ D+I+VDT+GRHK+E L +EM ++S+ PD VI V+D +IGQ A QA+ FK++
Sbjct: 180 K-YDVILVDTAGRHKEEKDLLDEMAELSQIVQPDEVILVIDGTIGQQARSQAETFKKTTD 238
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G++IV+K+DG AKGGGALSAVA ++P+ FIGTGE +D+FE FD + F+SRLLGMGD
Sbjct: 239 IGSIIVSKLDGSAKGGGALSAVAEIRAPIKFIGTGERVDDFEAFDPERFISRLLGMGDLD 298
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
++K EV E++ + G FTL+ M Q + + KMGPI Q+ ++PG ++L
Sbjct: 299 TLIEKAAEVTSEKSDKEMIDSIISGKFTLKDMENQLEMMNKMGPIQQIMKLIPGLGNQL- 357
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
P K ++ K+ Y +M+SMT EL+ NP+++ SRI RI+RG+G +V ++L+
Sbjct: 358 PANASKVTEEKLGMYKILMNSMTTYELE--NPEVIKKSRINRISRGAGLTNDDVKDLLKY 415
Query: 422 YKRLAKIWSKMKGL-KIPKKGEMSALSRNM 450
Y K +KG+ K G M L R+M
Sbjct: 416 YNVTKK---ALKGMGKRNMSGPMGKLMRHM 442
>gi|154151417|ref|YP_001405035.1| signal recognition particle protein Srp54 [Methanoregula boonei
6A8]
gi|153999969|gb|ABS56392.1| GTP-binding signal recognition particle SRP54, G- domain
[Methanoregula boonei 6A8]
Length = 441
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 173/429 (40%), Positives = 264/429 (61%), Gaps = 11/429 (2%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L GS+ A+++++ ++D ++E + + RALL ADV KLV ++ I+ ++L
Sbjct: 5 LSGSLKDALKKLAGKAVVDRAAVDELVKNLQRALLSADVNVKLVMDLSKAIRTRSLDEEL 64
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
N R + + ++ EL +++ + K +P VI+ GLQGSGKTTT K A Y
Sbjct: 65 PKNTNVREHVLRIVYQELVRLV----YASADLKLEPQVILMAGLQGSGKTTTTAKIARYF 120
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
QKKG K ++CADTFR GA+DQL K +P +G+ +D +I EG+ K + +
Sbjct: 121 QKKGMKVGVICADTFRPGAYDQLSTLCAKINVPCFGNPKVTDARQIVREGLVAVKDQ--E 178
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
+IIVDT GRH E L +E+ ++ T V+D+++GQ A +QA+ F +++ + V
Sbjct: 179 VIIVDTQGRHALEPDLIQEIIDLNALTKASHRWLVIDAALGQQASEQAKRFHEAIGIDGV 238
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAVA TKS ++FIG GE +++ E FD F+SRLLGMGD ++
Sbjct: 239 IITKMDGTAKGGGALSAVAETKSGIVFIGAGETIEDLERFDANGFISRLLGMGDLQALVE 298
Query: 306 KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGR 365
K+ E D+ ++ + +G+FTLR MY+Q + + KMGP+ Q+ SMLP + +L P+G
Sbjct: 299 KVQEAQMADEVD--MEAMMKGHFTLRDMYKQLEALNKMGPLKQIMSMLPMGNMQL-PEGV 355
Query: 366 EKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRL 425
+ K+ RY +MDSM+ +ELD +P L+N SR+ RIARG+G EV E+L+ YK +
Sbjct: 356 YDVTSTKMARYRILMDSMSPKELD--DPSLINSSRMQRIARGAGGTPEEVRELLKYYKMM 413
Query: 426 AKIWSKMKG 434
K ++G
Sbjct: 414 HKTLKGLRG 422
>gi|386003024|ref|YP_005921323.1| Signal sequence recognition 54 kDa protein [Methanosaeta
harundinacea 6Ac]
gi|357211080|gb|AET65700.1| Signal sequence recognition 54 kDa protein [Methanosaeta
harundinacea 6Ac]
Length = 446
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 181/436 (41%), Positives = 267/436 (61%), Gaps = 13/436 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LGGS+ A++++++A+ ID++V++E + EI RALLQADV KLV + I+
Sbjct: 1 MVLDSLGGSLRGALKKIASASRIDKQVVDEAVREIQRALLQADVNVKLVMNLSNRIRDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G N R + ++ EL ++ P K+ IM VGLQGSGKTTT K
Sbjct: 61 LSEKPAPGMNPREHVINIVYQELINLVGKSSPVTLEKQ----TIMLVGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + Q+KG + A+VCADTFRAGAFDQLK K + FYG D +A G+E +
Sbjct: 117 LATFFQRKGLRSAVVCADTFRAGAFDQLKALCEKQGVFFYGEKGNPDAPAVARRGLEASR 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D++IVDT+GRH E L +EM + D + VMD+++GQ A +QA+AF ++V
Sbjct: 177 K--YDIVIVDTAGRHALEKDLIQEMMDIDAVVAADHKLLVMDAALGQQASEQAKAFNKAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG AKGGGA+SAVA T S V FIG GE ++ E F+ F+SRLLGMGD
Sbjct: 235 GITGVIITKLDGTAKGGGAMSAVAETNSSVAFIGVGETPNDLERFEADRFISRLLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFSS 358
+++ E ++++ + ++ L G FTL+ M +Q + I KMGP+ Q+ MLP G
Sbjct: 295 KTLIERAQE-TKVEEEVD-VEALMRGKFTLKDMCKQMEAINKMGPLKQIMQMLPLGGMGL 352
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
+L + + ++ ++++Y +M SMT EL+ +PK++ SRI RI+RGSG V E+
Sbjct: 353 DLSDQ-EYQVTKDRLEKYRVIMSSMTEAELE--DPKIITASRIKRISRGSGTPPELVREL 409
Query: 419 LEEYKRLAKIWSKMKG 434
L+ +K + K M+G
Sbjct: 410 LKSHKAMQKALKGMRG 425
>gi|355571041|ref|ZP_09042311.1| Signal recognition 54 kDa protein [Methanolinea tarda NOBI-1]
gi|354826323|gb|EHF10539.1| Signal recognition 54 kDa protein [Methanolinea tarda NOBI-1]
Length = 440
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 168/433 (38%), Positives = 265/433 (61%), Gaps = 11/433 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG S+ A+++++ T++D + E + ++ RAL+QADV +LV ++ IKK
Sbjct: 1 MLDRLGTSLKDAVKKLAGKTVVDRAAVEELVRDLQRALIQADVNVRLVMQLSEAIKKRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G R + + ++ EL +++ S K +P VI+ GLQGSGKTTT K
Sbjct: 61 EEQPPKGMTVREHVLRIVYQELVRLVG----SAGEVKLEPQVILMAGLQGSGKTTTTAKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y Q+KG + A++CADTFR GAFDQL ++ +P +G+ E D ++I EG+++
Sbjct: 117 ARYFQRKGLRVAVICADTFRPGAFDQLNTLCSRIHVPCFGNPGEKDALKIVREGLKSLS- 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ ++II+DT GRH E+ L E+ + + V+D+++GQ A +QA+ F +++S
Sbjct: 176 -SAEVIIIDTQGRHALESDLIREIIDIQAIASAQHRWLVIDAALGQQAAEQARKFHEAIS 234
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+ VI+TKMDG AKGGGALSAVA T+S ++FIG+GE +D+ E FD F+SRLLGMGD
Sbjct: 235 IDGVIITKMDGTAKGGGALSAVAETRSGIVFIGSGETIDDLERFDPDGFISRLLGMGDLK 294
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
++K E + + + + G F+LR MY Q + + +MGP+ Q+ SMLP + E+
Sbjct: 295 ALVEKAEETLAAAEVD--VNAMLRGKFSLRDMYNQLEAVTRMGPLKQIMSMLPLGNMEI- 351
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
P+ + K++RY +MDSMT E+D +P ++ SRI RIARG+G EV E+L
Sbjct: 352 PEDAYDITSTKMQRYRIIMDSMTAAEMD--DPSVIGSSRIQRIARGAGASPEEVRELLRY 409
Query: 422 YKRLAKIWSKMKG 434
YK + + ++G
Sbjct: 410 YKMMKRALKGVRG 422
>gi|389860812|ref|YP_006363052.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Thermogladius cellulolyticus 1633]
gi|388525716|gb|AFK50914.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Thermogladius cellulolyticus 1633]
Length = 447
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 166/429 (38%), Positives = 265/429 (61%), Gaps = 14/429 (3%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
E +NE + E+ + L+++DV +LV ++ IK+ + G +R ++ +L
Sbjct: 20 ETSVNEFVKELQKELIRSDVNVRLVMDLTKKIKERAAEERPPPGLTRRDWFLSIVYEQLV 79
Query: 85 KMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
+ P +P P K KP V++ VGLQGSGKTTT K AY+++ +G+K LV ADTFR G
Sbjct: 80 NLFGGPERPQVKPPK-KPWVVLLVGLQGSGKTTTAGKLAYFYKLEGYKVGLVAADTFRPG 138
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFE 203
A++QLK +P YG D V IAV+GVE F+++ D+II+DT+GRH +E L
Sbjct: 139 AYEQLKTLGEAVGVPVYGEPGSKDAVSIAVKGVEFFREKGFDVIIIDTAGRHHREEDLLA 198
Query: 204 EMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAV 263
EM ++ PD V+ V+D+SIGQ AF+ A F VG++IVTK+DG AKGGGALSAV
Sbjct: 199 EMEDIAGRVRPDEVVLVLDASIGQQAFEVASKFHNKTPVGSIIVTKLDGTAKGGGALSAV 258
Query: 264 AATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKL 323
AAT + + F+GTGE +DE EVFD K FV+R++G+GD G ++++ + ++ + ++ +
Sbjct: 259 AATGARIKFVGTGEKIDELEVFDPKRFVARIMGLGDLEGLLERVKK-AKVELSEKDVEDI 317
Query: 324 SEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSM 383
EG +RI+Y+Q ++ KMGP+ ++ M+PG + + K + K+++++ ++SM
Sbjct: 318 LEGRVNMRIVYKQLVSLRKMGPLRKILEMIPGLQVRMPVEVDSKTLEEKMEKWLAAINSM 377
Query: 384 TNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMK---------G 434
T EELD NP++++ SR+ RI+ G+G +V +L++Y+ + I ++K G
Sbjct: 378 TYEELD--NPEVIDKSRVKRISYGAGVDPEDVKALLKQYEAVKSISKQLKRQKNLLAKMG 435
Query: 435 LKIPKKGEM 443
L K GE+
Sbjct: 436 LDTKKLGEL 444
>gi|284162145|ref|YP_003400768.1| GTP-binding signal recognition particle SRP54 G-domain-containing
protein [Archaeoglobus profundus DSM 5631]
gi|284012142|gb|ADB58095.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Archaeoglobus profundus DSM 5631]
Length = 435
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/417 (41%), Positives = 261/417 (62%), Gaps = 14/417 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
++ A+++++ + +D+ ++ E + +I RAL++ADV + V+E+ IKK +++ G
Sbjct: 5 ALKEAVRKITRSATVDKALVEEIVKDIQRALIKADVNVRHVKEISDAIKKRALSEEVLEG 64
Query: 69 HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
N R I + ++ EL K + G KK K IM VGLQGSGKTTT K A Y + K
Sbjct: 65 LNPREHIIKIVYEELLKGIGEG-LEIPLKKSK---IMLVGLQGSGKTTTTAKLAKYFKDK 120
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G + A+VCADT+R A+DQLKQ A I FYG D V+I ++ K + D+II
Sbjct: 121 GLRTAVVCADTWRPAAYDQLKQLAENYGIAFYGERESKDAVKIVENALKKLK--DYDMII 178
Query: 189 VDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 248
+DT+GRH E L +EM ++++ NPD + V+D++IGQ A QA+AF +++ + +I+T
Sbjct: 179 IDTAGRHALEKELIDEMIEIAKVANPDYKLLVLDAAIGQLASKQAKAFHEAIGIDGIIIT 238
Query: 249 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 308
K DG AKGGGALSA P+ FIGTGE +++FE FD FVSRLLGMGD ++K+
Sbjct: 239 KFDGTAKGGGALSAAREIGIPIAFIGTGEKVEDFERFDPAGFVSRLLGMGDIKALIEKVE 298
Query: 309 EVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP-GFSSELMPKGRE 366
V ++ PE K +G FTL+ +Y+Q + + KMGPI ++F +LP GF ++ E
Sbjct: 299 RVAKQEELDPE---KFLKGTFTLKDIYKQIEAMQKMGPIKKIFELLPFGFGLKVDDNIME 355
Query: 367 KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYK 423
+Q K+K++ +MDSMT EEL NPK+++ SRI RIA GSG ++V E+L Y+
Sbjct: 356 M-TQEKMKKFKVIMDSMTEEEL--LNPKIIDSSRIRRIAIGSGTTPQDVKELLRYYR 409
>gi|289596592|ref|YP_003483288.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Aciduliprofundum boonei T469]
gi|289534379|gb|ADD08726.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Aciduliprofundum boonei T469]
Length = 449
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 176/434 (40%), Positives = 263/434 (60%), Gaps = 9/434 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ I+++S A +DE ++ E + +I RALL+ADV+ L ++ N+++
Sbjct: 1 MLDSLGESLRNTIRKISKAGYVDESLIKEVVRDIQRALLRADVEVHLALKLSKNVERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ +G + R + + I+ EL +L K KP +M VGL G GKTTT K
Sbjct: 61 EEKPPSGMSHRDFLIKIIYEELVAILGKEKEVAL----KPQKLMLVGLYGQGKTTTAGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y KKG AL+ D R A++QLKQ + +P +G E D +IA E V+ K
Sbjct: 117 ARYFHKKGLSVALIACDVHRPAAYEQLKQIGEQLNVPVFGIPGEKDARKIAREAVKKMK- 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ + I DTSGRH E L EE++ + E PD + V+D++IGQ A QA+AF +V
Sbjct: 176 -DYQVQIFDTSGRHALEDDLIEEIKDLKEIIQPDEIFLVLDATIGQQAGKQAKAFHDAVG 234
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
V VI+TKMDG AKGGGALSAVAAT +PV+FIGTGEH+++ E F+ F+SRLLGMGD
Sbjct: 235 VTGVIITKMDGSAKGGGALSAVAATGAPVVFIGTGEHLEDLEHFNPTRFISRLLGMGDLE 294
Query: 302 GFMD-KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
++ + ++ ++++++ G F L+ MYE ++ + K G + ++ LP F
Sbjct: 295 TLLETAKELELKEEEAEKVMERMMSGKFNLKDMYEIWEQMAKPGLLQKILYSLPFFKMGD 354
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ KG +ES+ K+++Y +MDSMT EEL+ NP+++ SRI RIARGSGR +EV +L+
Sbjct: 355 IDKGMVEESEEKLRKYRIIMDSMTYEELE--NPEIIKSSRIKRIARGSGRSEQEVRSLLK 412
Query: 421 EYKRLAKIWSKMKG 434
EY R+ K +M+G
Sbjct: 413 EYNRMKKTMKQMRG 426
>gi|296241780|ref|YP_003649267.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosphaera aggregans DSM 11486]
gi|296094364|gb|ADG90315.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosphaera aggregans DSM 11486]
Length = 448
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 160/403 (39%), Positives = 258/403 (64%), Gaps = 13/403 (3%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
E+ +NE + ++ + L+++DV L E+ IK+ + G +++ ++ EL
Sbjct: 22 EEAVNEFIKDLQKELVKSDVNLNLAFEITKKIKERALTQEPPVGVSRKEWFLSIVYEELV 81
Query: 85 KMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
K+L KPS P + KP +IM VGLQGSGKTTT K AY+++ +G+K LV ADTFR
Sbjct: 82 KLLGGDSKPSIKPAR-KPWIIMLVGLQGSGKTTTAAKLAYFYKLEGYKVGLVAADTFRPA 140
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFE 203
A+DQL+Q + +P YG + D V IA GV+ F ++ +++I+DT+GRH +E L E
Sbjct: 141 AYDQLRQLGEQIGVPVYGDPSIEDAVEIASRGVKYFVEKGFEVVIIDTAGRHHKEEDLLE 200
Query: 204 EMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAV 263
EMR +S + PD +I V+D SIGQ A++ A+ F ++ +G++IVTK+DG AKGGGALSAV
Sbjct: 201 EMRLISSSVKPDEIILVIDGSIGQQAYNIAKKFHETTPIGSIIVTKLDGTAKGGGALSAV 260
Query: 264 AATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQK- 322
AAT +P+ F+G GE +++FEVF V R+LG GD G ++++ + Q EL +K
Sbjct: 261 AATGAPIKFVGLGEKVEDFEVFKPSKLVGRVLGYGDIEGLVERVKRI-----QLELTEKD 315
Query: 323 ---LSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTM 379
+ EG +R++Y+Q ++ KMGP+ ++ M+PG ++ + K+ + K+ +++ +
Sbjct: 316 VEDIMEGRLNMRLVYKQLVSLRKMGPLRKILQMIPGLGVKIPFEVDPKDLELKLSKWLAV 375
Query: 380 MDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY 422
++SMT +ELD NP++++ SR+ RIARG+G V E+L++Y
Sbjct: 376 INSMTYDELD--NPEIIDKSRLKRIARGAGVDAEYVRELLKQY 416
>gi|448589278|ref|ZP_21649437.1| signal recognition particle protein Srp54 [Haloferax elongans ATCC
BAA-1513]
gi|445735706|gb|ELZ87254.1| signal recognition particle protein Srp54 [Haloferax elongans ATCC
BAA-1513]
Length = 461
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/444 (38%), Positives = 268/444 (60%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + IDE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRIDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVSLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ PDL + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ + D PE + K G+FTL+ M +Q + + KMGP+ QV M+P
Sbjct: 295 KQLSERVERAMAETTAEDEDWDPEEMMK---GSFTLKDMQKQMEAMNKMGPLDQVLDMIP 351
Query: 355 GFSSEL---MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
G L +P ++ +++ + +MDSMT+EEL+ NP+++ SR+ RIA+GSGR
Sbjct: 352 GLGGGLKDQLPDDAMDVTKDRMRSFEIIMDSMTDEELE--NPRIIGASRVQRIAQGSGRD 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
+ E+LE+++ + + + +G+
Sbjct: 410 EETIQELLEQHRMMERTIKQFQGM 433
>gi|126460331|ref|YP_001056609.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum
calidifontis JCM 11548]
gi|171855105|sp|A3MWX6.1|SRP54_PYRCJ RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|126250052|gb|ABO09143.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum
calidifontis JCM 11548]
Length = 431
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/429 (40%), Positives = 268/429 (62%), Gaps = 10/429 (2%)
Query: 5 QLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDD 64
+L S+ I+++ IDE VL E EI R+LL+ADV +LV+ + K + +
Sbjct: 2 KLSEVFSKLIEKIRGVDYIDEAVLQELSREIQRSLLKADVPLELVKAFTDSAVKRIREEK 61
Query: 65 LAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKYAY 123
AG R + ++ EL K+L +P+ F P K KP V++ +G++GSGKTTT K A
Sbjct: 62 PPAGIPPREYLVYVLYEELVKLLGGEQPAEFKPTK-KPYVVLLLGVEGSGKTTTAAKLAK 120
Query: 124 YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKEN 183
Y K+G+K LV DT R AFDQLKQ A K +PFYG + V IAV GV+ FK N
Sbjct: 121 YLAKRGYKVGLVETDTIRPAAFDQLKQLAEKIGVPFYGERDGKNAVEIAVRGVQNFK--N 178
Query: 184 CDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVG 243
D++I+DT+GRH+ E L +E++ + +A PD V V+D+++G+ A QA+AF + + +
Sbjct: 179 MDVVIIDTAGRHRNEEELLKEVKAIYDAVKPDEVFLVIDATVGKLAAAQAEAFMKYLPIH 238
Query: 244 AVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGF 303
+VI+TKMD A+GGGAL+AVA T + V FIG GE +DEFE+F+ + FV+R+LGMGD
Sbjct: 239 SVIITKMDSTARGGGALAAVAKTGARVKFIGVGEDVDEFELFNPRKFVARVLGMGDLDAL 298
Query: 304 MDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPK 363
++KI V D+ +L++L G L +Q ++LK+GP+ +VF +LP + + +
Sbjct: 299 VEKIKAVFEEDK---VLEELESGRLDLLTFKKQIDSLLKLGPLSKVFQLLPSNFAIKVSE 355
Query: 364 GREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYK 423
+ + SQ ++++ ++ SMT EEL +P+++N SRI RIA G+G ++V EML ++
Sbjct: 356 EQIELSQKNLRKWKAILSSMTMEEL--KHPEVLNASRIRRIAMGAGVTPKDVKEMLTVFE 413
Query: 424 RLAKIWSKM 432
+ K+ SKM
Sbjct: 414 NMKKM-SKM 421
>gi|327401116|ref|YP_004341955.1| Signal recognition 54 kDa protein [Archaeoglobus veneficus SNP6]
gi|327316624|gb|AEA47240.1| Signal recognition 54 kDa protein [Archaeoglobus veneficus SNP6]
Length = 436
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 179/416 (43%), Positives = 260/416 (62%), Gaps = 14/416 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
S+ +++++ +T +D+ ++ E + +I RALL+ADV + V+E+ IKK +D+
Sbjct: 5 SLKDIVKKIARSTTVDKALVEEVVRDIQRALLKADVNVRQVKEISDAIKKRALSEDVLPT 64
Query: 69 HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
N R I + ++ EL + + G KK K IM VGLQGSGKTTT K A Y + K
Sbjct: 65 FNVREHIIRIVYEELMRGIGEG-LEIPLKKAK---IMLVGLQGSGKTTTAAKLAKYFKDK 120
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G K ++ ADT+R A++QLKQ A I FYG D V IA G++ K + D+II
Sbjct: 121 GMKTGVIAADTWRPAAYEQLKQLAESYGIGFYGEKENKDAVEIARNGLKALK--DYDMII 178
Query: 189 VDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 248
+DT+GRH E L +EM ++++AT PD + V+D++IGQ A QA+AF ++ + +I+T
Sbjct: 179 IDTAGRHALEEELIDEMIEIAKATQPDYKLLVLDAAIGQLASRQAKAFHDAIGINGIIIT 238
Query: 249 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 308
K DG AKGGGALSA P+ FIGTGE +++FE FD FVSRLLGMGD ++K+
Sbjct: 239 KFDGTAKGGGALSAAREIGIPIAFIGTGEKVEDFERFDPAGFVSRLLGMGDIKALLEKVE 298
Query: 309 EVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP-GFSSELMPKGRE 366
VV ++ PE K G FTL+ +Y+Q + + KMGPI ++F +LP GFS ++ E
Sbjct: 299 RVVSEEELDPEAFLK---GTFTLKDVYKQIEAMNKMGPISKIFELLPFGFSMKVDDSMME 355
Query: 367 KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY 422
+Q K+K++ +MDSMT EEL NPK+++ SRI RIA GSG +EV E+L+ Y
Sbjct: 356 M-TQEKMKKFRVIMDSMTEEEL--LNPKIIDSSRIRRIAIGSGTSPQEVKELLKYY 408
>gi|12230633|sp|P70722.2|SRP54_ACIAM RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|4165432|emb|CAA69991.1| fifty-four homologue of SRP54 [Acidianus ambivalens]
Length = 451
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 176/425 (41%), Positives = 268/425 (63%), Gaps = 9/425 (2%)
Query: 4 AQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLD 63
++L ++ A+++ + +K + + + E+ ++L+ ADV KLV + IK+ + +
Sbjct: 1 SKLLDNLRDAVRKFLTGSSSYDKAVEDFIKELQKSLISADVNVKLVFSLTNKIKERLKNE 60
Query: 64 DLAAGHNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYA 122
+R + +++EL + K P P K P VIM VG+QG+GKTTT K A
Sbjct: 61 KPPTYIERREWFIKIVYDELSNLFGGDKEPKVIPDK-IPYVIMLVGVQGTGKTTTAGKLA 119
Query: 123 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKE 182
Y+++KKG+K LV AD +R A +QL+Q + +P YG E D V IA GVE F E
Sbjct: 120 YFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDAVGIAKRGVEKFLSE 179
Query: 183 NCDLIIVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
++IIVDT+GRH +EAAL EEM+ + EA PD V V+D+SIGQ A+D A F Q+
Sbjct: 180 KMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASKFNQAS 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G +I+TKMDG AKGGGALSAVAAT + + FIGTGE +DE EVF+ + FV+R+LGMGD
Sbjct: 240 KIGTIIITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEVFNPRRFVARILGMGDI 299
Query: 301 SGFMDKIHEVVPMDQQPELLQKL--SEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
++KI EV D+ + ++++ +G TLR +Y Q + KMGP+ ++F +LPG
Sbjct: 300 ETILEKIKEVENYDKMQKKMEEVISGKGKLTLRDVYNQLIALRKMGPLSKLFQLLPGIGM 359
Query: 359 -ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
+P+ + K + K+++++ +M+SMT EELD NP +++ SR+ RIA GSG ++ +V E
Sbjct: 360 LGQIPEDQLKVGEEKMRKWLAIMNSMTYEELD--NPSIIDKSRMRRIALGSGTEIEDVKE 417
Query: 418 MLEEY 422
++E Y
Sbjct: 418 LIEHY 422
>gi|448578870|ref|ZP_21644246.1| signal recognition particle protein Srp54 [Haloferax larsenii JCM
13917]
gi|445725453|gb|ELZ77077.1| signal recognition particle protein Srp54 [Haloferax larsenii JCM
13917]
Length = 461
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 171/444 (38%), Positives = 268/444 (60%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + IDE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRIDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVSLI--GESTDIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ PDL + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIGFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ + D PE + K G+FTL+ M +Q + + KMGP+ QV M+P
Sbjct: 295 KQLSERVERAMAETTAEDEDWDPEEMMK---GSFTLKDMQKQMEAMNKMGPLDQVLDMIP 351
Query: 355 GFSSEL---MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
G L +P ++ +++ + +MDSMT+EEL+ NP+++ SR+ RIA+GSGR
Sbjct: 352 GLGGGLKDQLPDDAMDVTKDRMRSFEIIMDSMTDEELE--NPRIIGASRVQRIAQGSGRD 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
+ E+LE+++ + + + +G+
Sbjct: 410 EETIQELLEQHRMMERTIKQFQGM 433
>gi|448622352|ref|ZP_21669046.1| signal recognition particle protein Srp54 [Haloferax denitrificans
ATCC 35960]
gi|445754434|gb|EMA05839.1| signal recognition particle protein Srp54 [Haloferax denitrificans
ATCC 35960]
Length = 464
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 171/432 (39%), Positives = 261/432 (60%), Gaps = 20/432 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTNARDHVLKIVYEELVDLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ PDL + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEGVVQPDLNLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ + D PE + K GNFTL+ M +Q + + KMGP+ QV M+P
Sbjct: 295 KQLSERVERAMSETQAEDEDWDPEEMMK---GNFTLKDMQKQMEAMDKMGPLDQVLDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P ++ +++ + +MDSMT EEL+ NP+ + SR+ RIA+GSG+
Sbjct: 352 GFGGGIKDQLPDDAMDVTKDRMRAFEVIMDSMTEEELE--NPRKVGASRVKRIAQGSGQD 409
Query: 412 VREVMEMLEEYK 423
+ E+LE+++
Sbjct: 410 EETIQELLEQHR 421
>gi|374326743|ref|YP_005084943.1| signal recognition particle [Pyrobaculum sp. 1860]
gi|356642012|gb|AET32691.1| signal recognition particle (srp54 family), putative [Pyrobaculum
sp. 1860]
Length = 433
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 176/433 (40%), Positives = 266/433 (61%), Gaps = 12/433 (2%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
S+ I+++ IDE L E EI R LL+ADV LV+ N K + + AG
Sbjct: 9 SKLIEKIRGVEYIDEATLQELSREIQRTLLKADVPLDLVKSFTENAVKRIKEEKPPAGIP 68
Query: 71 KRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
R + +++EL K+L + P F P K +P V++ +G++GSGKTTT K A Y K+G
Sbjct: 69 PREYLIYVLYDELVKLLGGEQTPEFKPVK-RPYVVLLLGVEGSGKTTTAAKLAKYLAKRG 127
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K LV DT R AFDQL+Q A + +PFYG E D V IA GV+ F+ N D++IV
Sbjct: 128 YKVGLVETDTIRPAAFDQLRQLAERIGVPFYGERDEKDAVEIAKRGVQNFR--NMDVVIV 185
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DT+GRH+ E AL +E++ + +A PD V+ V+D+++G+ A QA+AF + + + +VI+TK
Sbjct: 186 DTAGRHRNEEALLQEVKAIYDAVGPDEVMLVIDATVGKLAAAQAEAFMKYLPIHSVIITK 245
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
MD A+GGGAL+AVA T + V FIG GE +DEFE F + FV+R+LGMGD ++KI
Sbjct: 246 MDSTARGGGALAAVAKTGARVKFIGVGEDVDEFEPFHPRKFVARVLGMGDLDALVEKIKA 305
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
V ++ L+++ G L +Q ++LK+GP+ +VF +LPG + + + + + S
Sbjct: 306 VFEEEEV---LEEIESGKLDLLTFKKQIDSLLKLGPLSKVFQLLPGGIAAKISEEQIELS 362
Query: 370 QAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
Q +K++ ++ SMT EEL NP ++N SRI RIA G+G ++V EML Y+ L K+
Sbjct: 363 QKNLKKWRAILSSMTREEL--KNPDVLNASRIRRIALGAGVTPKDVKEMLTVYENLRKMS 420
Query: 430 SKMK---GLKIPK 439
+K L++P+
Sbjct: 421 KTLKRQLRLRMPR 433
>gi|395646259|ref|ZP_10434119.1| Signal recognition 54 kDa protein [Methanofollis liminatans DSM
4140]
gi|395442999|gb|EJG07756.1| Signal recognition 54 kDa protein [Methanofollis liminatans DSM
4140]
Length = 438
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 168/436 (38%), Positives = 265/436 (60%), Gaps = 13/436 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ A+++++ T++D + E + + RALLQADV KLV ++ +IK+
Sbjct: 1 MLDSLSSSLKDALKKIAGKTVVDRAAVEELVRSLQRALLQADVNVKLVMQLSQSIKRRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N R + + ++ EL ++ GK + + I+ GLQGSGKTTT K
Sbjct: 61 EEEPPKGMNLREHVLRIVYQELVALMGGAGKVDLSQQ-----TILMAGLQGSGKTTTTAK 115
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG K ++CADTFR GA+ QL K +P +G E D + I EG++ F
Sbjct: 116 LARYFQRKGLKVGVICADTFRPGAYKQLSTLCAKVNVPIFGDPAEKDALLIVREGIKRFA 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ +++I+DT GRH E L +E+ ++E P+ V+D+++GQ A +QA+ F +++
Sbjct: 176 E--TEVVIIDTQGRHALEDDLIQEIIDINEIAKPEHRWLVIDAALGQQAAEQARRFNEAI 233
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TKMDG AKGGGALSAV+ TKS ++FIG GE +D+ E FD F+SRLLGMGD
Sbjct: 234 EIDGVLITKMDGTAKGGGALSAVSETKSGIVFIGAGETIDDLERFDPDGFISRLLGMGDL 293
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
++ EV+ D++ + + + G FTLR MY+Q + + KMGP+ QV SMLP
Sbjct: 294 KALAERAEEVMA-DEEMD-VNAMLRGKFTLRDMYKQLETVNKMGPLKQVMSMLP-LGGMQ 350
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+P + K++RY +MDSMT+ ELD +P++++ SR+ RI+RG+G +V E+L+
Sbjct: 351 IPDDAYDVTSTKMERYKVVMDSMTSAELD--DPQIISGSRVHRISRGAGVSPEDVRELLK 408
Query: 421 EYKRLAKIWSKMKGLK 436
Y+ + + M+G K
Sbjct: 409 YYRVMQRALKGMRGSK 424
>gi|146304520|ref|YP_001191836.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Metallosphaera sedula DSM 5348]
gi|172046932|sp|A4YHL0.1|SRP54_METS5 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|145702770|gb|ABP95912.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Metallosphaera sedula DSM 5348]
Length = 446
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 171/433 (39%), Positives = 266/433 (61%), Gaps = 15/433 (3%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I A+++ E + E + +I +AL+ +DVQ KLV + IK+ + + +
Sbjct: 5 IRDAVRKFLGGNTSYEVAVEEFIKDIQKALISSDVQVKLVFSLTNKIKERLKKETPPSNL 64
Query: 70 NKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
+R + +++EL + K P PK P VIM VG+QG+GKTTT K AY+++K+
Sbjct: 65 ERREWFIKIVYDELSALFGGDKEPEVNPK-SIPWVIMLVGVQGTGKTTTAGKLAYFYKKR 123
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G+K ALV AD +R A +QL+Q + +P YG D V IA GVE F E +L+I
Sbjct: 124 GYKVALVGADVYRPAALEQLQQIGKQINVPVYGEPGSQDAVGIAKRGVEKFLSERYELVI 183
Query: 189 VDTSGRH--KQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVI 246
VDT+GRH +E L EEM+ + E P+ VI V+D+S+GQ A+D A+ F ++ +VG++I
Sbjct: 184 VDTAGRHGYGEEVKLLEEMKDIYEKIKPNEVILVIDASLGQKAYDLAKRFHEASNVGSII 243
Query: 247 VTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDK 306
+TKMDG AKGGGALSAVAAT +P+ FIG GE +DE EVF+ + FV+R+LGMGD ++K
Sbjct: 244 ITKMDGTAKGGGALSAVAATGAPIKFIGVGEKIDELEVFNPRRFVARILGMGDLEAIIEK 303
Query: 307 IHEVVPMDQQPELLQKLSE-----GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS-SEL 360
+ M+ + +K+ E TLR MY+Q + KMGP+ ++ ++PG +
Sbjct: 304 MK---AMEDYEGIQKKMGEVMTGKSKLTLRDMYKQIVAVRKMGPLSKILQLIPGMNMMGD 360
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+P+ + K + K++R++++M+SMT +ELD NP +++ R+ RIA GSG +V EV E++E
Sbjct: 361 IPEDQVKVGEQKMQRWLSIMNSMTYQELD--NPSIIDKQRMRRIAMGSGTEVEEVRELIE 418
Query: 421 EYKRLAKIWSKMK 433
+ + + +K
Sbjct: 419 HFNTVQRTLKMLK 431
>gi|18314019|ref|NP_560686.1| signal recognition particle protein [Pyrobaculum aerophilum str.
IM2]
gi|28380154|sp|Q8ZT95.1|SRP54_PYRAE RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|18161596|gb|AAL64868.1| signal recognition particle (srp54 family), putative [Pyrobaculum
aerophilum str. IM2]
Length = 433
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 174/423 (41%), Positives = 261/423 (61%), Gaps = 9/423 (2%)
Query: 12 RAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNK 71
+ ++++ IDE L E EI R LL+ADV LV+ N K + + AG
Sbjct: 10 KLLEKIRGVDYIDEATLQELSREIQRTLLKADVPLDLVKSFTENAVKRIKEEKPPAGIPP 69
Query: 72 RRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGW 130
R + ++ EL K+L +P+ F P K KP +++ +G++GSGKTTT K A Y K+G+
Sbjct: 70 REYLIYVLYEELVKLLGGEQPAEFKPTK-KPYIVLLLGVEGSGKTTTAAKLAKYLAKRGY 128
Query: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVD 190
K LV DT R AFDQL+Q A K +PFYG D V IA GV+ FK N D+IIVD
Sbjct: 129 KVGLVETDTIRPAAFDQLRQLAEKIGVPFYGERDGKDAVEIAKRGVQNFK--NMDVIIVD 186
Query: 191 TSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKM 250
T+GRH+ E AL +E+R + +A +PD V+ V+D+++G+ A QA+AF + + + +VI+TKM
Sbjct: 187 TAGRHRNEEALLKEVRAIYDAVSPDEVVLVIDATVGKMAAAQAEAFMKYLPIHSVIITKM 246
Query: 251 DGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV 310
D A+GGGAL+AVA T + V FIG GE +DEFE F + FV+R+LGMGD ++KI V
Sbjct: 247 DSTARGGGALAAVAKTGAKVKFIGVGEDVDEFEQFSPRKFVARVLGMGDLDTLLEKIKAV 306
Query: 311 VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQ 370
++ L+++ G L +Q ++LK+GP+ +VF +LPG + + + + + SQ
Sbjct: 307 FEEEEV---LEEIESGRLDLLTFKKQIDSLLKLGPLSKVFQLLPGNLAAKISEEQIELSQ 363
Query: 371 AKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWS 430
+K++ ++ SMT EEL NP+++N SRI RIA G+G ++V EML Y+ L K+
Sbjct: 364 RNLKKWRAILSSMTLEEL--KNPEILNASRIRRIALGAGVAPKDVKEMLTVYENLRKMSK 421
Query: 431 KMK 433
++
Sbjct: 422 TLR 424
>gi|313124886|ref|YP_004035150.1| signal recognition particle subunit ffh/srp54 (srp54)
[Halogeometricum borinquense DSM 11551]
gi|448287294|ref|ZP_21478507.1| signal recognition particle protein Srp54 [Halogeometricum
borinquense DSM 11551]
gi|312291251|gb|ADQ65711.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Halogeometricum borinquense DSM 11551]
gi|445572502|gb|ELY27040.1| signal recognition particle protein Srp54 [Halogeometricum
borinquense DSM 11551]
Length = 464
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/441 (37%), Positives = 265/441 (60%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ ++IK+
Sbjct: 1 MVLDNLGSSLRGSLDKLQGKSRLDEDDVEEIVREIQRSLLSADVDVNLVMDLSSSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + P I+ GLQGSGKTTT K
Sbjct: 61 LNEEPPGGTSARDHVLKIVYEELVGLI--GESTDIPLE--PQTILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG + A++ DTFR GA+DQ KQ +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRAAVIQTDTFRPGAYDQAKQMCERAEVEFYGDPDEEDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E AL +E+ + A NPD + V+D++IGQ A DQA+ F S+
Sbjct: 175 TEDADIHIVDTAGRHALEDALIDEIEDIDSAVNPDRSLLVLDAAIGQGAKDQARQFDDSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVAITKLDGTAKGGGALTAVNETDSSIGFLGTGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ + Q + + +G+FTL+ M +Q + + +MGP+ QV M+PG
Sbjct: 295 KQLSERVERAMAETQEEEDDWDPEDIMKGSFTLKDMQKQMEAMNRMGPLDQVLDMIPGLG 354
Query: 358 S---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
+ +P +Q +++ + +MDSMT EL+ NP+ + SR+ RIARGSG+
Sbjct: 355 GGFKDQLPDDAMDVTQDRMRSFDVIMDSMTEAELE--NPRTIGASRVRRIARGSGKDEET 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V E+LE++K + + + +G+
Sbjct: 413 VQELLEQHKMMERTIKQFQGM 433
>gi|448712956|ref|ZP_21701886.1| signal recognition particle protein Srp54 [Halobiforma
nitratireducens JCM 10879]
gi|445789882|gb|EMA40556.1| signal recognition particle protein Srp54 [Halobiforma
nitratireducens JCM 10879]
Length = 463
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/444 (38%), Positives = 265/444 (59%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ ++E + EI R+L+ ADV LV+E+ +I++
Sbjct: 1 MVLDDLGSSLRGSLDKLRGKSRISEEDVDEIVKEIQRSLISADVDISLVQELSDSIEERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA+V DTFR GA+DQ K+ A +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVVQTDTFRPGAYDQAKEMAERAEVDFYGNPDNDDPVEIARNGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
S +++ E+ D PE + +G FTL M +Q + + MGP+ QV M+P
Sbjct: 295 SQLAERVERAMEQTEIEEEDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF S + +P +Q +++R+ +MDSMT E + PK + S+I RIARGSG
Sbjct: 352 GFGSGIKDQLPDDAMDVTQDRMRRFQVIMDSMT--EAEKEYPKAIGQSQIERIARGSGTS 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
+V ++LE+YK + K + +G+
Sbjct: 410 EEDVRQLLEQYKMMEKTIKQFQGM 433
>gi|126179907|ref|YP_001047872.1| signal recognition particle protein Srp54 [Methanoculleus
marisnigri JR1]
gi|125862701|gb|ABN57890.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanoculleus marisnigri JR1]
Length = 443
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 259/423 (61%), Gaps = 12/423 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ A+++++ T+ID + E + ++ RALL ADV KLV + IK+
Sbjct: 1 MLDNLGTSLKDAVKKLAGKTVIDRAAVEELVRDLQRALLSADVNVKLVMHLSQTIKQRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ EL +M+ PG+ + +P I+ GLQGSGKTTT K
Sbjct: 61 DEEPPKGMGVREHVLRIVYQELVRMMGSPGEVAL-----EPQTILMAGLQGSGKTTTTAK 115
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG + ++CADTFR GA+DQLK + +P +G E D ++I EG+ ++
Sbjct: 116 LARYFQRKGLRVGVICADTFRPGAYDQLKTLCDRISVPCFGDPKEPDALKIVREGLPKYR 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K ++II+DT GRH E L EE+ ++E ++ + V+D+++GQ A +QA+ F +++
Sbjct: 176 K-LYEVIIIDTQGRHALEENLIEEIVNINEISHAEHRWLVIDAALGQQASEQARRFHEAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V+VTKMDG AKGGGALSAVA T+S ++FIG+GE +D+ E FD F+SRLLGMGD
Sbjct: 235 GIDGVLVTKMDGTAKGGGALSAVAETQSGIVFIGSGETIDDLERFDPDGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+++ E V + + + +G FTLR MY+Q + + KMGP+ Q+ SMLP
Sbjct: 295 KALVERAEEAVSGEDLD--VNAMLKGKFTLRDMYKQLEALNKMGPLKQIMSMLP-LGGMQ 351
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+P + K++RY +MDSMT ELD +P + SRI RIARG+G +V ++++
Sbjct: 352 IPDDAYDITSTKMQRYKVIMDSMTPPELD--DPSTLGSSRIQRIARGAGVTPDDVRDLIK 409
Query: 421 EYK 423
YK
Sbjct: 410 YYK 412
>gi|11498230|ref|NP_069456.1| signal recognition particle protein Srp54 [Archaeoglobus fulgidus
DSM 4304]
gi|3334342|sp|O29633.1|SRP54_ARCFU RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|2650007|gb|AAB90619.1| signal recognition particle, subunit SRP54 (srp54) [Archaeoglobus
fulgidus DSM 4304]
Length = 433
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 179/417 (42%), Positives = 256/417 (61%), Gaps = 14/417 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
S+ ++++ ++ ID+K + E + EI RAL++ADV + V+E+ IKK +D+
Sbjct: 5 SLKEVARKIAGSSSIDKKFVEEMVKEIQRALIKADVNVRQVKEISDAIKKRALSEDVLPA 64
Query: 69 HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
N + I + ++ EL + + G KK K IM VGLQGSGKTTT K A Y + +
Sbjct: 65 LNAKEQILKIVYEELLRGVGEG-LEIPLKKAK---IMLVGLQGSGKTTTTAKMAKYFKDR 120
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G K A+V ADT+R A++QL+Q A + I FYG E D V+I +E K + D+II
Sbjct: 121 GMKVAVVAADTWRPAAYEQLRQLAEEYGITFYGEKGEKDAVKIVKNALEKLK--DHDMII 178
Query: 189 VDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 248
+DT+GRH E L +EM +++E PD + V+D++IGQ A QAQAF +++ + +I+T
Sbjct: 179 IDTAGRHALEDELIDEMIKIAEVARPDYKLLVLDAAIGQLASKQAQAFHEAIGINGIIIT 238
Query: 249 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 308
K DG AKGGGALSA P+ FIGTGE +++FE FD FVSRLLGMGD M+KI
Sbjct: 239 KFDGTAKGGGALSAARQIGIPIAFIGTGEKVEDFERFDPAGFVSRLLGMGDIKALMEKIE 298
Query: 309 EVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREK 367
+ ++ PE K G FTL+ +Y+Q + + KMGP+ ++F MLP F L
Sbjct: 299 RIASEEELDPEAFLK---GTFTLKDIYKQIEAMNKMGPVRKIFEMLP-FGLGLKVDNDVM 354
Query: 368 E-SQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYK 423
E +Q K+K++ +MDSMT EEL NPK+++ SRI RIA GSG +EV E+L YK
Sbjct: 355 EMTQEKMKKFRVIMDSMTEEEL--LNPKIIDSSRIRRIAIGSGTSPQEVKELLNYYK 409
>gi|292654301|ref|YP_003534198.1| signal recognition particle protein [Haloferax volcanii DS2]
gi|433434645|ref|ZP_20408024.1| signal recognition particle protein Srp54 [Haloferax sp. BAB2207]
gi|448293845|ref|ZP_21483948.1| signal recognition particle protein Srp54 [Haloferax volcanii DS2]
gi|448573620|ref|ZP_21641103.1| signal recognition particle protein Srp54 [Haloferax lucentense DSM
14919]
gi|448597768|ref|ZP_21654693.1| signal recognition particle protein Srp54 [Haloferax alexandrinus
JCM 10717]
gi|28380161|sp|Q977V2.1|SRP54_HALVD RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54; AltName: Full=Hv54h
gi|15277690|gb|AAK93963.1|AF395887_1 signal recognition particle 54 kDa subunit-like protein [Haloferax
volcanii]
gi|291371443|gb|ADE03670.1| signal recognition particle 54K protein [Haloferax volcanii DS2]
gi|432192665|gb|ELK49503.1| signal recognition particle protein Srp54 [Haloferax sp. BAB2207]
gi|445569766|gb|ELY24337.1| signal recognition particle protein Srp54 [Haloferax volcanii DS2]
gi|445718526|gb|ELZ70216.1| signal recognition particle protein Srp54 [Haloferax lucentense DSM
14919]
gi|445739229|gb|ELZ90738.1| signal recognition particle protein Srp54 [Haloferax alexandrinus
JCM 10717]
Length = 465
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/432 (39%), Positives = 262/432 (60%), Gaps = 20/432 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVDLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L +E+ ++ PDL + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIDEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ + D PE + K GNFTL+ M +Q + + KMGP+ QV M+P
Sbjct: 295 KQLSERVERAMSETQAEDEDWDPEEMMK---GNFTLKDMQKQMEAMDKMGPLDQVLDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P ++ +++ + +MDSMT EEL+ NP+ + SR+ RIA+GSG+
Sbjct: 352 GFGGGIKDQLPDDAMDVTKDRMRSFEVIMDSMTEEELE--NPRKVGASRVRRIAQGSGQD 409
Query: 412 VREVMEMLEEYK 423
+ E+LE+++
Sbjct: 410 EETIQELLEQHR 421
>gi|88604251|ref|YP_504429.1| signal recognition particle protein Srp54 [Methanospirillum
hungatei JF-1]
gi|88189713|gb|ABD42710.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanospirillum hungatei JF-1]
Length = 437
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/433 (40%), Positives = 262/433 (60%), Gaps = 12/433 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG ++ A+++++ T+ID + E + ++ RALLQADV K V ++ IKK
Sbjct: 1 MLDNLGSNLKDALRKLAGKTVIDRAAVEELVKDLQRALLQADVNVKQVMQLSQTIKKRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G R + + ++ EL ++ K T K +I+ GLQGSGKTTT K
Sbjct: 61 DEQPPKGVTAREHVLRIVYEELVALVGQ-KVEVTLGK---QIILMAGLQGSGKTTTTAKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + ++KG + A++CADTFR GA+ Q+K K +P YG +E D +I EG+ K+
Sbjct: 117 ARFFKRKGMRVAVICADTFRPGAYTQIKTLCDKVHVPCYGDPSEHDARKIVREGLAQLKE 176
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E +IIVDT GRH E L E+ ++E T V+D+++GQ A +QA+ F ++VS
Sbjct: 177 E---VIIVDTQGRHALEDDLITEIIDLNEITKATHRWLVLDAALGQQAREQARRFHEAVS 233
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+ VI+TKMDG AKGGGA+SAVA T S ++FIG GE +++ E FD ++SRLLGMGD
Sbjct: 234 IDGVIITKMDGTAKGGGAMSAVAETGSGIVFIGQGETIEDLEWFDPNSYISRLLGMGDLK 293
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
+++ E + D+Q + + G FTLR MY Q + + KMGP+ QV SMLP +L
Sbjct: 294 ALAERVQESI--DEQDIDVNAMLSGKFTLRDMYRQLEAVNKMGPLKQVLSMLPLGGMDL- 350
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
P + +K+ +Y +MDSMT ELD +P ++N SRI RIA+G+G Q+ EV E+++
Sbjct: 351 PTEALDVTASKMGKYRVIMDSMTATELD--DPTVLNGSRIQRIAQGAGAQLEEVRELIKY 408
Query: 422 YKRLAKIWSKMKG 434
YK + + + +KG
Sbjct: 409 YKMMKRTFKGLKG 421
>gi|432330521|ref|YP_007248664.1| signal recognition particle GTPase [Methanoregula formicicum SMSP]
gi|432137230|gb|AGB02157.1| signal recognition particle GTPase [Methanoregula formicicum SMSP]
Length = 442
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/427 (40%), Positives = 262/427 (61%), Gaps = 13/427 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ A+++++ T++D +++ + ++ RAL+ +DV KLV E+ I+
Sbjct: 1 MLDNLSSSLKDALKKLAGKTVVDRAAVDDLVKDLQRALISSDVNVKLVMELSKAIRTRSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G N R + + ++ EL +++ + T K +P I+ GLQGSGKTTT K
Sbjct: 61 EEEPPKGMNVREHVLRIVYQELVRLV----WASTEVKLEPQTILMAGLQGSGKTTTTAKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y QKKG K ++CADTFR GAFDQ+ TK +P +G+ E D ++I EG+ K+
Sbjct: 117 ARYFQKKGMKVGVICADTFRPGAFDQISTLCTKINVPCFGNPQEKDALKITREGLAALKE 176
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ +LIIVDT GRH EA L +E+ ++ T V+D+++GQ A +QA+ F +++
Sbjct: 177 Q--ELIIVDTQGRHALEAELIKEIIDLNVLTKATHRWLVIDAALGQQASEQAKRFHEAIG 234
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+ VI+TKMDG AKGGGA+SAVA TKS + FIG+GE +++ E FD F+SRLLGMGD
Sbjct: 235 IDGVIITKMDGTAKGGGAMSAVAETKSGIAFIGSGETIEDLERFDPDGFISRLLGMGDLK 294
Query: 302 GFMDKIHEVV-PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+++ +E + P D + K G FTLR MY+Q + + KMGP+ Q+ MLP + +L
Sbjct: 295 ALVERANEAINPEDVDVNAMMK---GKFTLRDMYKQLEALNKMGPLKQIMGMLPLGNMQL 351
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
P+G + K+ RY +MDSMT ELD P L+N SR+ RIA G+G EV E+++
Sbjct: 352 -PEGVYDVTSTKMVRYRIIMDSMTAAELD--EPSLINSSRMQRIAHGAGATPDEVRELIK 408
Query: 421 EYKRLAK 427
YK + +
Sbjct: 409 YYKMMQR 415
>gi|448607296|ref|ZP_21659441.1| signal recognition particle protein Srp54 [Haloferax sulfurifontis
ATCC BAA-897]
gi|445738308|gb|ELZ89833.1| signal recognition particle protein Srp54 [Haloferax sulfurifontis
ATCC BAA-897]
Length = 464
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 169/432 (39%), Positives = 261/432 (60%), Gaps = 20/432 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTNARDHVLKIVYEELVDLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L +E+ ++ PDL + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIDEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ + D PE + K GNFTL+ M +Q + + KMGP+ QV M+P
Sbjct: 295 KQLSERVERAMSETQAEDEDWDPEEMMK---GNFTLKDMQKQMEAMDKMGPLDQVLDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P ++ +++ + +MDSMT EL+ NP+ + SR+ RIA+GSG+
Sbjct: 352 GFGGGIKDQLPDDAMDVTKDRMRAFEVIMDSMTEAELE--NPRKVGASRVKRIAQGSGQD 409
Query: 412 VREVMEMLEEYK 423
+ E+LE+++
Sbjct: 410 EETIQELLEQHR 421
>gi|119719417|ref|YP_919912.1| GTP-binding signal recognition particle [Thermofilum pendens Hrk 5]
gi|119524537|gb|ABL77909.1| signal recognition particle subunit FFH/SRP54 (srp54) [Thermofilum
pendens Hrk 5]
Length = 431
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/432 (37%), Positives = 266/432 (61%), Gaps = 16/432 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
S+ + ++ ++ ++D + ++ + E+ RALL+ADV LV + IKK ++ G
Sbjct: 7 SLMGVVSRIRSSVLLDSREVDLVIRELQRALLKADVDVGLVLSVSERIKKRFFEEEQPPG 66
Query: 69 HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
+K+ ++ + ++ EL +L + P +MFVGL+GSGKTTT K A Y+++K
Sbjct: 67 FSKKEVLVKILYEELVNLLGGEETPELKVSSTPFKVMFVGLEGSGKTTTVAKVANYYKRK 126
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G++ +V ADT+R GA++QL+ A K +PFYG E D V +A+ GV+ + +I+
Sbjct: 127 GYRVGVVAADTYRPGAYEQLRSLAEKVGVPFYGDPQERDAVSLALRGVKVLSDKGIQMIL 186
Query: 189 VDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 248
+DT+GRHK E AL EE++ + PD V+ V+D++ G A QA+AF++++ G VIV
Sbjct: 187 IDTAGRHKDEEALMEEVKTLYREVKPDAVVLVVDATQGSAVARQARAFQEAMPFGYVIVA 246
Query: 249 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 308
KMDG AKGGGALSAVA++K+ VIFIGTGE +++ E F+ K FV+RLLGM D + +
Sbjct: 247 KMDGSAKGGGALSAVASSKARVIFIGTGEKIEDLEEFNPKKFVARLLGMPDLEALLQRFS 306
Query: 309 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 368
E +++ E + ++ G TL + EQ + + KMGP+ ++ M+ G ++ E
Sbjct: 307 EFARLEK--ERARAIASGKITLLDLKEQLEGLRKMGPLSKIAEMM-GLQVKV------SE 357
Query: 369 SQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKI 428
I +++ +M+SMT EEL NP++++ SR+ RIARGSG R+V ++LE Y+ + K+
Sbjct: 358 EDLNIDKWINIMNSMTMEEL--LNPEIIDSSRMRRIARGSGVSPRDVKQLLEAYRNMKKV 415
Query: 429 W-----SKMKGL 435
S+M+GL
Sbjct: 416 MRQLSRSRMRGL 427
>gi|448544114|ref|ZP_21625427.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-646]
gi|448551126|ref|ZP_21629268.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-645]
gi|448558381|ref|ZP_21633055.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-644]
gi|445705618|gb|ELZ57511.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-646]
gi|445710682|gb|ELZ62480.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-645]
gi|445713269|gb|ELZ65048.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-644]
Length = 465
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/432 (38%), Positives = 261/432 (60%), Gaps = 20/432 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVDLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L +E+ ++ PDL + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIDEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ + D PE + K GNFTL+ M +Q + + KMGP+ QV M+P
Sbjct: 295 KQLSERVERAMSETQAEDEDWDPEEMMK---GNFTLKDMQKQMEAMDKMGPLDQVLDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P ++ +++ + +MDSMT EL+ NP+ + SR+ RIA+GSG+
Sbjct: 352 GFGGGIKDQLPDDAMDVTKDRMRAFEVIMDSMTEAELE--NPRKVGASRVRRIAQGSGQD 409
Query: 412 VREVMEMLEEYK 423
+ E+LE+++
Sbjct: 410 EETIQELLEQHR 421
>gi|399576173|ref|ZP_10769930.1| signal recognition particle subunit ffh/srp54 (srp54) [Halogranum
salarium B-1]
gi|399238884|gb|EJN59811.1| signal recognition particle subunit ffh/srp54 (srp54) [Halogranum
salarium B-1]
Length = 466
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/436 (39%), Positives = 265/436 (60%), Gaps = 20/436 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + ++ + E + EI R+LLQADV+ LV ++ +IKK
Sbjct: 1 MVLDDLGSSLRGSLNKLQGKSRLSKEDVEEIVKEIQRSLLQADVEVALVMDLSKSIKKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R I + ++ E+ +++ G + P + P IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDHILKIVYEEMVELV--GDSTEIPLE--PQTIMLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG E DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGDPDEEDPVKIAREGMEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
++ D+ IVDT+GRH E+ L +E+ ++ EA NP+L + V+D++IGQ A QAQ F S+
Sbjct: 175 TDDADVHIVDTAGRHALESDLIDEIEEIEEAVNPELNLLVLDAAIGQGAKKQAQEFDNSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETGSSISFLGTGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ + D PE + K G+FTL+ M Q + KMGP+ Q+ M+P
Sbjct: 295 KQLSERVERAMAETQAEDEDWNPEDIMK---GSFTLKDMKRQMDAMNKMGPLDQIMDMIP 351
Query: 355 GFSSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
G LM P +Q +++ + +MDSMT E++ NP+ + S+I RI+ GSG+
Sbjct: 352 GLGGGLMDQLPDDAMDVTQNRMRSFEVIMDSMTESEME--NPRSIGASQIQRISHGSGKD 409
Query: 412 VREVMEMLEEYKRLAK 427
+ E+LE++K + +
Sbjct: 410 EETIRELLEQHKMMER 425
>gi|16081627|ref|NP_393991.1| signal recognition particle protein Srp54 [Thermoplasma acidophilum
DSM 1728]
gi|12230635|sp|Q9HKT0.1|SRP54_THEAC RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|10639683|emb|CAC11655.1| probable signal recognition particle protein [Thermoplasma
acidophilum]
Length = 456
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/438 (39%), Positives = 264/438 (60%), Gaps = 12/438 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL S+ I++++ ++ ID++ + E ++ R LL+ADV K V ++ +++
Sbjct: 1 MVLESFSASLRETIRKITGSSYIDKETVKEISKDLQRILLKADVNVKTVLQVTKEMERRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG + + + I+ EL K+L G+PS K KP IM VGL G+GKTTT K
Sbjct: 61 LEEKPPAGMAHQDYMVRIIYEELLKIL--GEPSNV--KLKPQTIMLVGLYGNGKTTTAGK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + KKG L+ AD R A+DQLKQ A++ FYG +E DPVR+ G+E K
Sbjct: 117 LARFFAKKGLNSGLIAADVHRYAAYDQLKQIASEVNAKFYGDQSEKDPVRLIKHGLEQLK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ + I+DTSGR +A LF+E+R++ EA PD V+ ++D+++GQ A +A+AF ++
Sbjct: 177 --DVAVKIIDTSGRDSMDAELFDEIRRIKEAVAPDEVLMIIDATMGQQAGPEAKAFNDAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +I+TKMDG AKGGGALSAVA P+ FIGTGEHMD+ EVFD K F+SRLLG+GD
Sbjct: 235 GVTGIIITKMDGTAKGGGALSAVAEIHVPIYFIGTGEHMDDLEVFDPKKFLSRLLGLGDL 294
Query: 301 SGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF--- 356
+ + E + ++ E +KL G F L+ MY+ ++ K G + ++ LP
Sbjct: 295 ESLFETVQEADITEEEAQESFEKLMTGKFNLKDMYDVWEKFSKPGLMKKLVDALPLARIP 354
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 416
S+ + + + ++ K++ Y +MDSMT EEL+ NP+++N RI RIARG+G + +V
Sbjct: 355 GSQKIDDSKIQSAEDKLRMYRIIMDSMTFEELE--NPEIINAKRITRIARGAGVREEDVR 412
Query: 417 EMLEEYKRLAKIWSKMKG 434
+L+E+K + MKG
Sbjct: 413 MLLKEFKAMKNNMKMMKG 430
>gi|448330573|ref|ZP_21519853.1| signal recognition particle protein Srp54 [Natrinema versiforme JCM
10478]
gi|445611451|gb|ELY65203.1| signal recognition particle protein Srp54 [Natrinema versiforme JCM
10478]
Length = 464
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 165/441 (37%), Positives = 264/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ ++ A +A++ FYG DPV IA EG+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEEMAERAEVDFYGDPDSEDPVEIAREGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L E+ ++ + +PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSDADVHIVDTAGRHALEDDLIAEIEEIEDVVDPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
S +++ E M+++ + + +G FTL M +Q + + MGP+ QV M+PG
Sbjct: 295 SQLAERVERAMEQTDMEEEDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIPGIG 354
Query: 358 S---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
+ +P+ +Q +++ + +MDSMT E + PK + S+I RIARGSG + +
Sbjct: 355 GGIKDQLPEDAMDVTQERMQTFTVIMDSMT--EAEKEYPKAIGASQIQRIARGSGTEEEQ 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V E+L++YK + + + +G+
Sbjct: 413 VRELLQQYKMMERTMKQFQGM 433
>gi|448560514|ref|ZP_21633962.1| signal recognition particle protein Srp54 [Haloferax prahovense DSM
18310]
gi|448582785|ref|ZP_21646289.1| signal recognition particle protein Srp54 [Haloferax gibbonsii ATCC
33959]
gi|445722164|gb|ELZ73827.1| signal recognition particle protein Srp54 [Haloferax prahovense DSM
18310]
gi|445732433|gb|ELZ84016.1| signal recognition particle protein Srp54 [Haloferax gibbonsii ATCC
33959]
Length = 463
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 168/432 (38%), Positives = 261/432 (60%), Gaps = 20/432 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVGLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA +G+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ PDL + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ + D PE + K GNFTL+ M +Q + + KMGP+ QV M+P
Sbjct: 295 KQLSERVERAMSETQAEDEDWDPEEMMK---GNFTLKDMQKQMEAMNKMGPLDQVLDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P ++ +++ + +MDSMT EEL+ NP+ + SR+ RIA+GSG+
Sbjct: 352 GFGGGIKDQLPDDAMDVTKDRMRAFEVVMDSMTEEELE--NPRKVGASRVKRIAQGSGQD 409
Query: 412 VREVMEMLEEYK 423
+ E+LE+++
Sbjct: 410 EETIQELLEQHR 421
>gi|374629551|ref|ZP_09701936.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanoplanus limicola DSM 2279]
gi|373907664|gb|EHQ35768.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanoplanus limicola DSM 2279]
Length = 439
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 170/433 (39%), Positives = 263/433 (60%), Gaps = 11/433 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG + A+++++ T+ID + E + ++ R LLQADV KLV + IKK
Sbjct: 1 MLDRLGTGLKDAVKKLAGKTVIDRAAVEELVKDLQRVLLQADVNVKLVMNLSKAIKKRSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + R + + ++ EL ++ T G P +I+ GLQGSGKTTT K
Sbjct: 61 EEEPPKGMSVREHVLRIVYQELVNLMGD---EVTVTLG-PQIILMAGLQGSGKTTTTGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y Q+KG + ++CAD FR GA+DQLK K +P YG +D V+I G+ K
Sbjct: 117 ARYFQRKGLRVGVICADVFRPGAYDQLKNLCNKVNVPCYGEPGVTDAVKIVENGIRELK- 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
N +++I+DT GRH E L E+ ++ T V+D+++GQ A +QA F +++S
Sbjct: 176 -NTEVLIIDTQGRHALEDDLISEIIDLNNLTKATHRWLVIDAALGQQAKEQAARFHEAIS 234
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+ VI+TKMDG AKGGGALSAVA T S ++F G+GE +++ E FD F+SRLLGMGD
Sbjct: 235 IDGVIITKMDGTAKGGGALSAVAETGSGIVFTGSGETIEDLERFDPDSFISRLLGMGDLK 294
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
++K EV+ D++ + + + +G FTLR MY+Q +++ KMGP+ QV SMLP +++
Sbjct: 295 SLIEKAEEVMA-DEEFD-VNAMMKGKFTLRDMYKQLESLKKMGPLKQVMSMLPMGGAKI- 351
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
P+ + K++RY +MDSMTN+EL+ NP +++ SR+ RI+ G+G EV E+L+
Sbjct: 352 PEDVFDTTSVKMERYKIIMDSMTNDELE--NPSVISGSRVHRISLGAGATPEEVRELLKY 409
Query: 422 YKRLAKIWSKMKG 434
YK + + +G
Sbjct: 410 YKTMQRAIKGFRG 422
>gi|171185970|ref|YP_001794889.1| GTP-binding signal recognition particle [Pyrobaculum neutrophilum
V24Sta]
gi|226734219|sp|B1Y9L4.1|SRP54_THENV RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|170935182|gb|ACB40443.1| GTP-binding signal recognition particle SRP54 G- domain
[Pyrobaculum neutrophilum V24Sta]
Length = 433
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 175/432 (40%), Positives = 263/432 (60%), Gaps = 12/432 (2%)
Query: 12 RAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNK 71
+ ++++ + IDE L + EI RALL+ADV +V+ K + + AG
Sbjct: 10 KLVEKIRGVSYIDEATLQDLSREIQRALLKADVPLDMVKAFTDAAVKRIKEEKPPAGIPP 69
Query: 72 RRIIQQAIFNELCKMLDPGKP-SFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGW 130
R + ++ EL K+L +P F P K KP V++ +G++GSGKTTT K A K+G+
Sbjct: 70 REYLLYVLYEELVKLLGGEQPPEFKPTK-KPYVVLLLGVEGSGKTTTAAKLAKLLVKRGY 128
Query: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVD 190
K LV DT R AFDQL+Q A K +PFYG D V IA GV+ K N D++IVD
Sbjct: 129 KVGLVETDTVRPAAFDQLRQLAEKIGVPFYGERDGKDAVEIARRGVQNLK--NLDVVIVD 186
Query: 191 TSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKM 250
T+GRH+ E AL +E++ + EA +PD V+ V+D+++G+ A QA+AF + + + +VI+TKM
Sbjct: 187 TAGRHRNEEALLQEVKAIYEAVSPDEVVLVIDATVGKLAAAQAEAFMRYLPIHSVIITKM 246
Query: 251 DGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV 310
D A+GGGAL+AVA T + V FIG GE +DE E+F + FV+R+LGMGD +++I V
Sbjct: 247 DSTARGGGALAAVAKTGAKVKFIGVGEDVDELEMFIPRKFVARVLGMGDLDALVERIKAV 306
Query: 311 VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQ 370
+Q +Q++ G L +Q +LK+GP+ +VF MLPG + + + + + SQ
Sbjct: 307 FEEEQV---IQEIESGKLDLLTFKKQIDGLLKLGPLSKVFQMLPGGLAAKISEEQIELSQ 363
Query: 371 AKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY---KRLAK 427
+K++ ++ SMT EEL NP+L+N SRI RIA G+G R+V EML Y KR++K
Sbjct: 364 KNLKKWRAILSSMTVEEL--KNPELLNASRIRRIALGAGVTPRDVKEMLTVYENLKRMSK 421
Query: 428 IWSKMKGLKIPK 439
+ +K+P+
Sbjct: 422 TLKRQLRMKMPR 433
>gi|20095048|ref|NP_614895.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19]
gi|23822175|sp|Q8TUY9.1|SRP54_METKA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|19888324|gb|AAM02825.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19]
Length = 447
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 169/439 (38%), Positives = 274/439 (62%), Gaps = 10/439 (2%)
Query: 15 QQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRI 74
+++ A+IIDE + E + ++ RALL+ADV KLV E+ I+K ++ AG KR
Sbjct: 13 KKIKGASIIDEDFVKEVVRDVQRALLEADVDVKLVLELSKRIEKRALEEEPPAGVPKRDY 72
Query: 75 IQQAIFNELCKMLDPGKPS--FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
+ + ++ EL ++L K +VIM VGL G GKTTT K A Y Q+KG++
Sbjct: 73 LLRIVYEELVELLGGEKTEGLDIDLSRDVNVIMLVGLYGMGKTTTAAKLARYLQRKGYRV 132
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
LV AD +R A +QL+Q A + +P + + D V +AV+GVE K E CD++IVDT+
Sbjct: 133 GLVGADPYRPAAGEQLRQLAEEVDVPVHVEDVD-DAVEMAVKGVEALKDE-CDVVIVDTA 190
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GR + L +E+R+++E P V+ V+D+++GQ A D A+AF ++V + V++TK+D
Sbjct: 191 GRDRLSEDLIDELREMAERIEPHEVLLVLDATVGQKAGDHAEAFHEAVQLTGVVITKLDT 250
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
AKGGGALSAVA T +P+ F+GTGE +D+ E F+ + FV+RLLG+GD + + E++
Sbjct: 251 AAKGGGALSAVARTGAPIKFVGTGERVDDLEEFNPRSFVARLLGIGDIDELLRRTEEMLE 310
Query: 313 MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAK 372
+++ + + EG FTL+ +YEQ + + KMGP+ ++ +PG + + ++ +
Sbjct: 311 EEEK---AEDVLEGEFTLKDLYEQLEALSKMGPVDKLLQYVPGMGGGRNVRKISQITEER 367
Query: 373 IKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKM 432
+K+Y +MDSMT +EL+ NP+++N SRI RIA GSG R+V+E+L Y+ + + +
Sbjct: 368 LKKYKVIMDSMTEKELE--NPEILNKSRIRRIAIGSGTSERDVIELLNHYRMMKDVIEDI 425
Query: 433 KGLKIPK-KGEMSALSRNM 450
+ +IP+ GE+ + RN+
Sbjct: 426 QSGRIPRIGGELGRVIRNV 444
>gi|302761688|ref|XP_002964266.1| hypothetical protein SELMODRAFT_81201 [Selaginella moellendorffii]
gi|300167995|gb|EFJ34599.1| hypothetical protein SELMODRAFT_81201 [Selaginella moellendorffii]
Length = 221
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/212 (68%), Positives = 175/212 (82%), Gaps = 2/212 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG IS AIQ+++ AT+ID+K L C+NEIT ALLQADVQFKLV+ + +N++K V
Sbjct: 1 MVLGELGSRISGAIQRLNTATVIDDKALTICVNEITHALLQADVQFKLVQALSSNVRKSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LAAGH+KR IIQ+A+F+EL MLD GKPSFTP KG+ +V+M VGLQG GKTTTC+K
Sbjct: 61 --EKLAAGHDKRHIIQKAVFHELRAMLDAGKPSFTPTKGRTNVVMLVGLQGCGKTTTCSK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA +++KKG+ PALVCADTFRAGAFDQLKQNATK KIPFYGSYTE+DPV IA EGV F
Sbjct: 119 YALHYRKKGFNPALVCADTFRAGAFDQLKQNATKVKIPFYGSYTETDPVVIAQEGVRKFA 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT 212
DLII+DTSGRHKQE ALFEEMRQ++ AT
Sbjct: 179 DAKHDLIILDTSGRHKQENALFEEMRQLAAAT 210
>gi|448401706|ref|ZP_21571772.1| signal recognition particle protein Srp54 [Haloterrigena limicola
JCM 13563]
gi|445666396|gb|ELZ19062.1| signal recognition particle protein Srp54 [Haloterrigena limicola
JCM 13563]
Length = 463
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/444 (37%), Positives = 260/444 (58%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAKEMTERAEVDFYGNPDNDDPVEIARNGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ + + PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDELIDEIEDIEDVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
S +++ E+ D PE + +G FTL M +Q + + MGP+ QV M+P
Sbjct: 295 SQLAERVERAMEQTEIEEDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P +Q +++ + +MDSMT E + PK + S+I RIARGSG
Sbjct: 352 GFGGGIKDQLPDDAMDVTQQRMRTFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGTS 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
+V E+LE+YK + K + +G+
Sbjct: 410 EEQVRELLEQYKMMEKTIKQFQGM 433
>gi|354609783|ref|ZP_09027739.1| Signal recognition 54 kDa protein [Halobacterium sp. DL1]
gi|353194603|gb|EHB60105.1| Signal recognition 54 kDa protein [Halobacterium sp. DL1]
Length = 460
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 272/459 (59%), Gaps = 23/459 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E+ +++ + EI R+LLQADV LV ++ +IK+
Sbjct: 1 MVLDDLGSSLRGTLDTLRGKSRISEEDVDDVVKEIQRSLLQADVDVSLVMDLSDSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ +G + R + + ++ EL +++ G + P + + I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPSGTSARDHVLRIVYEELVELV--GDSTNIPLEDQ--TILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ +A++ FYG DPV+IA +G+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMTERAEVEFYGDPDGEDPVQIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ A +PD + V+D++IGQ A DQA+ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLISEIEEIERAVDPDRNLLVLDAAIGQGAKDQAKQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVTITKLDGTAKGGGALTAVNETGSTIAFLGTGETVQDVERFEPDSFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQ------PELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ + Q+ PE + K G FTL M +Q Q + MGP+ QV M+P
Sbjct: 295 KQLTERVERAMHETQEGEDDWDPEDMMK---GEFTLHDMRKQMQAMDNMGPLDQVMDMIP 351
Query: 355 GFSSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
G LM P +Q +++ + +MDSMT E+ +NP+ + S++ RIA+GSG+
Sbjct: 352 GMGGGLMDELPDNAMDVTQDRMRNFEVIMDSMTEAEM--ANPRSVGASQVKRIAKGSGQS 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNM 450
V E+L+++K +A+ + +G+ G+M + + M
Sbjct: 410 EETVKELLDQHKMMARTMKQFQGM---GDGDMQRMMKKM 445
>gi|76154974|gb|AAX26359.2| SJCHGC03967 protein [Schistosoma japonicum]
Length = 235
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 140/235 (59%), Positives = 186/235 (79%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ + NATII+E VLN L EI AL++ADV +LV++++ N++ ++
Sbjct: 1 MVLAELGRKITNALRSLGNATIINEDVLNSLLKEICTALIEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR+IIQ A+F EL ++DP ++ P +G P+VIM VGLQG GKTTT TK
Sbjct: 61 DFDEMAAGLNKRKIIQSAVFKELVHLVDPQVKAWQPARGSPNVIMLVGLQGCGKTTTATK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK ++CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA +GV+ F
Sbjct: 121 LAYFYQRKGWKTCMICADTFRAGAFDQLKQNATKARIPFYGSYTETDPVVIARDGVQKFV 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
++ ++IIVDTSGRH+QE +LFEEM QVS A PD VI+V+D+SIGQA QA A
Sbjct: 181 EDKFEIIIVDTSGRHRQEDSLFEEMLQVSNAIEPDHVIYVLDASIGQACEAQASA 235
>gi|357508655|ref|XP_003624616.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
gi|355499631|gb|AES80834.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
Length = 321
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/335 (51%), Positives = 212/335 (63%), Gaps = 45/335 (13%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M LA LGG I R +MSN T+ID+++ C+NEITRA +Q+ ++ KL+R+M IK I+
Sbjct: 1 MGLADLGGRILRGFDKMSNETVIDKEIRKRCVNEITRAFIQSIIEPKLIRDMHAKIKNII 60
Query: 61 ----NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
NLDD A R++IQQ PS ++ + + GKTT
Sbjct: 61 YNHLNLDDFDAA---RKMIQQV----------------------PSCLLVLKV-CCGKTT 94
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC ++A ++QKKG K LVC DT R GAFDQLKQ + IP YG R E
Sbjct: 95 TCAQFANHYQKKGLKTGLVCTDTLRNGAFDQLKQIYAETNIPCYGRVGYCQNCR---ERC 151
Query: 177 ETFKKENCDLIIVDTSGRHKQEA-ALFEEMRQVSEATNPDLVIFVMDSSIGQAAFD---- 231
+ NCDLIIVD SG HKQE AL EE+ QVS+AT PDLVI V+D +IGQ AFD
Sbjct: 152 GQMQGGNCDLIIVDVSGGHKQEEDALIEEIHQVSKATKPDLVILVIDGNIGQHAFDHRSL 211
Query: 232 -QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 290
QA AF QSV +GAVIV+KMDG+A GGG+LSAVAATKS VIFIGTGEHMDEFEVF+VKPF
Sbjct: 212 KQATAFTQSVDIGAVIVSKMDGYAMGGGSLSAVAATKSSVIFIGTGEHMDEFEVFEVKPF 271
Query: 291 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSE 325
VS LLGM DW F+D+++EV PEL L E
Sbjct: 272 VSSLLGMDDWYEFIDRVYEV------PELPLNLPE 300
>gi|448366728|ref|ZP_21554851.1| signal recognition particle protein Srp54 [Natrialba aegyptia DSM
13077]
gi|445654183|gb|ELZ07039.1| signal recognition particle protein Srp54 [Natrialba aegyptia DSM
13077]
Length = 461
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 262/444 (59%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRSSLDKLRGKSRISEEDVEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A++A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMASRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ +PD + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVDPDTSLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ E+ D PE + +G FTL M +Q + + MGP+ QV M+P
Sbjct: 295 GQLAERVERAMEQTEIEEDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P +Q ++ + +MDSMT E + PK + S+I RIARGSG
Sbjct: 352 GFGGGIKDQLPDDAMDVTQERMHTFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGTN 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
+V E+L++YK + K + +G+
Sbjct: 410 EDQVRELLQQYKMMEKTIKQFQGM 433
>gi|449690341|ref|XP_002157121.2| PREDICTED: signal recognition particle 54 kDa protein-like, partial
[Hydra magnipapillata]
Length = 282
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 158/298 (53%), Positives = 207/298 (69%), Gaps = 19/298 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ NIK
Sbjct: 1 MVLADLGRKITSALKSLSNATVINEEVLNLMLKEICAALLEADVNVQLVQKLRANIKNAA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++AAG NKRR+IQ +F ELCK++DPG ++ P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 NFEEMAAGTNKRRLIQHTVFQELCKLVDPGVKAWQPIKGKNNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK LVCADTFRA + L + + G Y ++A E ++ +
Sbjct: 121 LAYYYQRKGWKTCLVCADTFRADKINILVETINTSGHSHTGEYL----TQLAREAIDFVR 176
Query: 181 -KENCDL--IIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
K C + + D A + MRQ +PD +IFVMD+SIGQA QA+AFK
Sbjct: 177 CKFGCTVKSFVTD-------NAVDVKSMRQ-----SPDNIIFVMDASIGQACEAQARAFK 224
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
+ V V +VI+TK+DGHAKGGGALSAVA T SP+IFIGTGEH+D+FE F +PFVS+LL
Sbjct: 225 EKVDVASVIITKLDGHAKGGGALSAVAGTSSPIIFIGTGEHIDDFEPFKTQPFVSKLL 282
>gi|448351062|ref|ZP_21539872.1| signal recognition particle protein Srp54 [Natrialba taiwanensis
DSM 12281]
gi|445635250|gb|ELY88421.1| signal recognition particle protein Srp54 [Natrialba taiwanensis
DSM 12281]
Length = 461
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 261/444 (58%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRSSLDKLRGKSRISEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMAGRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
S+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 SIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ E+ D PE + +G FTL M +Q + + MGP+ QV M+P
Sbjct: 295 GQLAERVERAMEQTEIEEDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P +Q ++ + +MDSMT E + PK + S+I RIARGSG
Sbjct: 352 GFGGGIKDQLPDDAMDVTQERMHTFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGTN 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
+V E+L++YK + K + +G+
Sbjct: 410 EDQVRELLQQYKMMEKTIKQFQGM 433
>gi|429217180|ref|YP_007175170.1| signal recognition particle GTPase [Caldisphaera lagunensis DSM
15908]
gi|429133709|gb|AFZ70721.1| signal recognition particle GTPase [Caldisphaera lagunensis DSM
15908]
Length = 446
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 176/437 (40%), Positives = 272/437 (62%), Gaps = 11/437 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL L ++++ ++ +T D + E + ++ R L+++DV KLV+E+ NIKK
Sbjct: 1 MVLEGLRNAVTKFLK--GGSTYKDS--VEEFIKDLQRELIKSDVNIKLVKELSENIKKKA 56
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ +G +++ + +++EL + P PKK P +I+ VG+QGSGKTTT
Sbjct: 57 LEEEPPSGISRKEWFIKIVYDELSNLFGGDTTPDVEPKK-IPWIILLVGVQGSGKTTTAG 115
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A ++ KKG+K LV ADT+R GA++QLK + + FYG + I++ GVE F
Sbjct: 116 KLASFYVKKGYKVGLVAADTYRPGAYEQLKMLSNLSGAMFYGDQNNNKAEEISINGVEYF 175
Query: 180 KKENCDLIIVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
K +N D+II+DT+GRH E +L +EMR +S PD VI V+DSSIGQ AFD A+ F
Sbjct: 176 KNKNADIIIIDTAGRHGYGNEKSLLDEMRNISNKVKPDEVILVLDSSIGQKAFDLAKQFH 235
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
++ +G++IVTK+DG AKGGG LSA+AAT + V FIGTGE +DE E+F+ FVSRLLG+
Sbjct: 236 ETTPIGSIIVTKLDGTAKGGGVLSAIAATGARVKFIGTGEKIDELELFNPSKFVSRLLGL 295
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
GD ++KI V +L + L++G T+R +Y Q +++ KMGP ++ MLP S
Sbjct: 296 GDLDALLEKIKSVQDNINIEKLQEDLAKGKITMRTLYAQLKSLRKMGPFSKILQMLPTSS 355
Query: 358 SELMPKGRE-KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 416
+ K + K + K+ +++ +++SMT EELD NP +++ R+ RIA GSG + +V
Sbjct: 356 LPVQIKNEQLKIGEEKVDKWLHIIESMTYEELD--NPDIIDRKRMRRIAIGSGTSIEDVK 413
Query: 417 EMLEEYKRLAKIWSKMK 433
+++ YK L I ++K
Sbjct: 414 DLIVYYKNLKAIMKRIK 430
>gi|76800703|ref|YP_325711.1| signal recognition particle 54K protein [Natronomonas pharaonis DSM
2160]
gi|121718419|sp|Q3IUP1.1|SRP54_NATPD RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|76556568|emb|CAI48139.1| signal recognition particle 54K protein [Natronomonas pharaonis DSM
2160]
Length = 466
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/443 (37%), Positives = 262/443 (59%), Gaps = 19/443 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T + E + E + EI R+LL ADV LV ++ +I++
Sbjct: 1 MVLDDLGSSLRGTLDKLQGKTTLSEDDVEEIVKEIQRSLLSADVDVDLVMDLSDSIRERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ E+ +++ G+ + P + + I+ GLQGSGKTTT K
Sbjct: 61 LDEEPPAGTTARDHVLKIVYEEMVELV--GESTALPLEEQ--TIVLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMCERAEVDFYGNPDSDDPVEIAERGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E AL +E+ + A +PD + V+D++IGQ A DQA+ F +V
Sbjct: 175 TADADVHIVDTAGRHALEEALIDELEAIESAVDPDRNLLVLDAAIGQGAKDQAERFHDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVAITKLDGTAKGGGALAAVDQTDSSIAFLGTGEEVKDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVV-----PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 355
+++ + D PE L K G FTL+ M Q + KMGP+ QV M+PG
Sbjct: 295 KQLSERVERAMEETQAEEDWDPEDLMK---GEFTLKDMRNQMNAMNKMGPLDQVMDMIPG 351
Query: 356 FSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQV 412
+ +P +Q +++ + +MDSM+ EL+ NP+ + S+I RIARGSG
Sbjct: 352 LGGGIKDQLPDDAMDMTQERLRDFEVIMDSMSEAELE--NPRAIGQSQIERIARGSGTDE 409
Query: 413 REVMEMLEEYKRLAKIWSKMKGL 435
V E+LE++K ++++ + +G+
Sbjct: 410 DTVRELLEQHKMMSRMMKQFQGM 432
>gi|429191533|ref|YP_007177211.1| signal recognition particle GTPase [Natronobacterium gregoryi SP2]
gi|448325331|ref|ZP_21514725.1| signal recognition particle protein Srp54 [Natronobacterium
gregoryi SP2]
gi|429135751|gb|AFZ72762.1| signal recognition particle GTPase [Natronobacterium gregoryi SP2]
gi|445615834|gb|ELY69473.1| signal recognition particle protein Srp54 [Natronobacterium
gregoryi SP2]
Length = 463
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/444 (37%), Positives = 257/444 (57%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + E + EI R+L+ ADV LV+E+ NI+
Sbjct: 1 MVLDDLGSSLRGTLDTLRGKSRVSEEDVEEIVKEIQRSLISADVDIALVQELSDNIEARA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLSIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ ++ A +A++ FYG DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAQEMAERAEVDFYGDPDADDPVEIARQGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TEEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVAITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPM------DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ + D PE + +GNFTL M +Q + + MG + QV M+P
Sbjct: 295 GQLAERVERAMEQTDLEEDDWDPE---DMLQGNFTLNDMQKQMEAVNNMGALDQVMDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF S + +P +Q +++ + +MDSMT+ E PK + S+I RIARGSG
Sbjct: 352 GFGSGVKDQLPDDAMDVTQERMRTFSVIMDSMTDTE--KEYPKAIGASQIERIARGSGTS 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
EV E+L++YK + K + +G+
Sbjct: 410 EDEVRELLQQYKMMEKTIKQFQGM 433
>gi|448363999|ref|ZP_21552593.1| signal recognition particle protein Srp54 [Natrialba asiatica DSM
12278]
gi|445644887|gb|ELY97894.1| signal recognition particle protein Srp54 [Natrialba asiatica DSM
12278]
Length = 461
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 261/444 (58%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRSSLDKLRGKSRISEEDVEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A++A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMASRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ E+ D PE + +G FTL M +Q + + MGP+ QV M+P
Sbjct: 295 GQLAERVERAMDQTEIEEDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P +Q ++ + +MDSMT E + PK + S+I RIARGSG
Sbjct: 352 GFGGGIKDQLPDDAMDVTQERMHTFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGTN 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
+V E+L++YK + K + +G+
Sbjct: 410 EDQVRELLQQYKMMEKTIKQFQGM 433
>gi|448375496|ref|ZP_21558973.1| signal recognition particle protein Srp54 [Halovivax asiaticus JCM
14624]
gi|445658767|gb|ELZ11583.1| signal recognition particle protein Srp54 [Halovivax asiaticus JCM
14624]
Length = 465
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 260/449 (57%), Gaps = 20/449 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E + + EI R+LL ADV LV E+ NI+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRISEADVESVVTEIQRSLLSADVDVSLVMELSENIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTELPLEDQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG KPA++ DTFR GAFDQ KQ +A++ FYG DPV IA G+E +
Sbjct: 117 MAWWFSTKGLKPAVIQTDTFRPGAFDQAKQMTERAEVEFYGDPDSEDPVEIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
N D+ IVDT+GRH E L +E+ ++ +PD+ + V+D++IGQ A DQA+ F S+
Sbjct: 175 TANADVHIVDTAGRHALEDDLIDEIEEIERVVDPDISLLVLDAAIGQGAKDQAREFHDSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE +D+ E F+ + F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVDQTDSSIAFLGTGEEVDDIERFEPEGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+ +++ ++ D PE ++ +GNFTL M +Q + + MGP+ QV M+P
Sbjct: 295 AQLAERVERAMDQTDIEEDDWDPE---EMLQGNFTLNDMQKQLEAMNNMGPLSQVLDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
G + +P ++ ++ + +MDSMT+ E P+ + S+I RIARGSG
Sbjct: 352 GMGGGIKDQLPDDAMDVTEERMHTFRVIMDSMTDAE--KEYPRAIGASQIERIARGSGTS 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGLKIPKK 440
V E+L+++K + + + +G+ K+
Sbjct: 410 EESVRELLDQFKLMERTMKQFQGMGSEKE 438
>gi|145591970|ref|YP_001153972.1| GTP-binding signal recognition particle [Pyrobaculum arsenaticum
DSM 13514]
gi|158514165|sp|A4WLQ3.1|SRP54_PYRAR RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|145283738|gb|ABP51320.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum
arsenaticum DSM 13514]
Length = 433
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 168/424 (39%), Positives = 257/424 (60%), Gaps = 9/424 (2%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
S+ ++++ + IDE L E EI R LL+ADV LV+ N K + + AG
Sbjct: 9 SKLVEKIRDVEYIDEATLQEIAREIQRTLLKADVPLDLVKTFTDNAVKRIREEKPPAGIP 68
Query: 71 KRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
R + ++ EL K++ +P+ F P K KP +++ +G++GSGKTTT K A Y K+G
Sbjct: 69 PREYLIYVLYEELVKLMGGEQPAEFKPTK-KPYIVLLLGVEGSGKTTTSAKLARYLMKRG 127
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K +V DT R AFDQL+Q A K PFYG D V IA GV K D++I+
Sbjct: 128 YKVGMVETDTIRPAAFDQLRQLAEKIGAPFYGERDGKDAVEIARRGVANLK--GVDVLII 185
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DT+GRH+ E AL +E++ + +A NPD V+ V+D+++G+ A QA+AF + + + VI+TK
Sbjct: 186 DTAGRHRNEEALLQEVKAIYDAVNPDEVVLVVDATVGKLAAAQAEAFMKYLPIHTVIITK 245
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
MD A+GGGAL+AVA T + V FIG GE ++E E F+ + FV+RLLGMGD ++KI
Sbjct: 246 MDSTARGGGALAAVAKTGARVKFIGVGEDVEELEPFNPRKFVARLLGMGDLDALLEKIKA 305
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
V ++ L+++ G L +Q +++K+GP+ +VF +LPG + + + + + S
Sbjct: 306 VFEEEEV---LEEIESGRLDLLTFKKQIDSLMKLGPLSKVFQLLPGGLAAKISEEQIELS 362
Query: 370 QAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
Q +K++ ++ SMT EEL NP ++N SRI RIA G+G ++V EML Y+ L K+
Sbjct: 363 QKNLKKWRAILSSMTMEEL--KNPDILNASRIRRIALGAGVTPKDVKEMLTVYENLKKMS 420
Query: 430 SKMK 433
+K
Sbjct: 421 KTLK 424
>gi|448611250|ref|ZP_21661884.1| signal recognition particle protein Srp54 [Haloferax mucosum ATCC
BAA-1512]
gi|445743682|gb|ELZ95163.1| signal recognition particle protein Srp54 [Haloferax mucosum ATCC
BAA-1512]
Length = 464
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 165/432 (38%), Positives = 262/432 (60%), Gaps = 20/432 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVGLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA +G+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIARDGLEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ ++ IVDT+GRH E L +E+ ++ PDL + V+D++IGQ A +QAQ F +S+
Sbjct: 177 --DAEVHIVDTAGRHALEDDLIDEIEEIESVVQPDLNMLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIGFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVV------PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ + D PE + K G+FTL+ M +Q + + KMGP+ QV M+P
Sbjct: 295 KQLSERVERAMTETQAEDEDWDPEEMMK---GSFTLKDMQKQMEAMNKMGPLDQVLDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P ++ +++ + +MDSMT+EEL+ NP+ + SR+ RIA+GSG+
Sbjct: 352 GFGGGIKDQLPDDAMDVTKDRMRSFEVVMDSMTDEELE--NPRKVGASRVRRIAQGSGQD 409
Query: 412 VREVMEMLEEYK 423
+ E+LE+++
Sbjct: 410 EETIQELLEQHR 421
>gi|322368150|ref|ZP_08042719.1| signal recognition 54 kDa protein [Haladaptatus paucihalophilus
DX253]
gi|320552166|gb|EFW93811.1| signal recognition 54 kDa protein [Haladaptatus paucihalophilus
DX253]
Length = 464
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 165/455 (36%), Positives = 276/455 (60%), Gaps = 15/455 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++S + + E + E + EI R+LLQADV LV ++ ++IK+
Sbjct: 1 MVLDNLGSSLRGSLDKLSGKSRVSEDDVEEIVKEIQRSLLQADVDVSLVMDLSSSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + ++ EL ++ G+ + P + + I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDHVLSIVYEELVGLV--GESTEIPLENQ--TILLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ ++A++ FYG DPV IA +G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMCSRAEVDFYGDPDNEDPVDIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ ++ +PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TADADIHIVDTAGRHALEDDLIDEIEEIESVVDPDRNLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVNETDSSIAFLGSGETVQDVERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP--MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
+++ + +++ + + +G+FTL M Q + KMGP+ QV M+PGF
Sbjct: 295 KQLTERVERAMSETEEEEDWDPEDMMKGSFTLNDMRHQMNAMNKMGPLEQVMDMIPGFGG 354
Query: 359 ELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREV 415
+M P ++ +++ + +MDSMT++EL+ NP+ + S+I RIARGSG+ +
Sbjct: 355 GIMDELPDDAMDVTKDRMRSFEIIMDSMTDKELE--NPRSIGASQIRRIARGSGQDEERI 412
Query: 416 MEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNM 450
E+L+++K +++ + +G+ + G+M + + M
Sbjct: 413 RELLQQHKMMSQTLKQFQGMG--QGGDMERMMKKM 445
>gi|148508291|gb|ABQ76075.1| signal recognition particle 54K protein [uncultured haloarchaeon]
Length = 465
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 263/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV+ LV E+ ++I+
Sbjct: 1 MVLDNLGSSLRGSLDKLQGKSRLDEDDVEEIVKEIQRSLLSADVEVSLVMELSSSIEDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + R + + ++ EL ++ G + P K + I+ GLQGSGKTT+ K
Sbjct: 61 TGEEPPAGTSARDHVLRIVYEELVDLV--GDSTDLPLKSQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ +Q +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEQMCERAEVSFYGDPDCDDPVKIAREGIEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH EA L +E+ + PD + V+D++IGQ A QA+ F ++
Sbjct: 177 --DADIHIVDTAGRHALEADLIDEIEAIDSTVAPDRSLLVLDAAIGQGAKQQAREFNNAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V+VTK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVVTKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPE---LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ + Q+ + + + EG+FTL+ M +Q + + +MGP+ QV M+PG
Sbjct: 295 KQLSERVERAMAETQEADDDWDPEDIMEGSFTLKDMRKQMEAMDRMGPLDQVMDMIPGLG 354
Query: 358 SEL---MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
L +P +Q +++ + +MDSMT EL+ +P+ + SR+ RIARGSG
Sbjct: 355 GGLKDQLPDDAMDVTQNRMRDFDVIMDSMTEAELE--DPRSVGASRVRRIARGSGTDEET 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V E+L+++K + + + +G+
Sbjct: 413 VRELLQQHKMMERTIKQFQGM 433
>gi|110669292|ref|YP_659103.1| signal recognition particle 54K protein [Haloquadratum walsbyi DSM
16790]
gi|121687082|sp|Q18EV2.1|SRP54_HALWD RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|109627039|emb|CAJ53515.1| signal recognition particle 54K protein [Haloquadratum walsbyi DSM
16790]
Length = 466
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 263/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV+ LV E+ ++I+
Sbjct: 1 MVLDNLGSSLRGSLDKLQGKSRLDEDDVEEIVKEIQRSLLSADVEVSLVMELSSSIEDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + R + + ++ EL ++ G + P K + I+ GLQGSGKTT+ K
Sbjct: 61 TGEEPPAGTSARDHVLRIVYEELVDLV--GDSTDLPLKSQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ +Q +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEQMCERAEVSFYGDPDCDDPVKIAREGIEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH EA L +E+ + PD + V+D++IGQ A QA+ F ++
Sbjct: 177 --DADIHIVDTAGRHALEADLIDEIEAIDSTVAPDRSLLVLDAAIGQGAKQQAREFNNAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V+VTK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVVTKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPE---LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ + Q+ + + + EG+FTL+ M +Q + + +MGP+ QV M+PG
Sbjct: 295 KQLSERVERAMAETQEADDDWDPEDIMEGSFTLKDMRKQMEAMDRMGPLDQVMDMIPGLG 354
Query: 358 SEL---MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
L +P +Q +++ + +MDSMT EL+ +P+ + SR+ RIARGSG
Sbjct: 355 GGLKDQLPDDAMDVTQNRMRDFDVIMDSMTEAELE--DPRSVGASRVRRIARGSGTDEET 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V E+L+++K + + + +G+
Sbjct: 413 VRELLQQHKMMERTIKQFQGM 433
>gi|383619954|ref|ZP_09946360.1| signal recognition particle protein Srp54 [Halobiforma lacisalsi
AJ5]
gi|448696432|ref|ZP_21697906.1| signal recognition particle protein Srp54 [Halobiforma lacisalsi
AJ5]
gi|445783638|gb|EMA34466.1| signal recognition particle protein Srp54 [Halobiforma lacisalsi
AJ5]
Length = 462
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 269/444 (60%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ ++E + EI R+L+ ADV LV+E+ NIK+
Sbjct: 1 MVLDDLGSSLRGSLDKLRGKSRISEEDVDEIVKEIQRSLISADVDISLVQELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 MEEEPPAGTPARDFVLRIVYEELVELI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMAERAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L +E+ ++ + PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIDEIEEIEDVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
S +++ E+ D PE + +G FTL M +Q + + MGP+ QV M+P
Sbjct: 295 SQLAERVERAMQQTEIEEDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P +Q +++++ +MDSMT E + PK + S+I RIARGSG
Sbjct: 352 GFGGGIKDQLPDDAMDVTQERMRKFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGTD 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
+V E+L++YK + K + +G+
Sbjct: 410 EEDVRELLQQYKMMEKTIKQFQGM 433
>gi|448407315|ref|ZP_21573703.1| signal recognition particle protein Srp54 [Halosimplex carlsbadense
2-9-1]
gi|445675651|gb|ELZ28180.1| signal recognition particle protein Srp54 [Halosimplex carlsbadense
2-9-1]
Length = 468
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 168/441 (38%), Positives = 259/441 (58%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E+ + E + +I R+LLQADV LV E+ IK
Sbjct: 1 MVLDDLGTSLRSTLDDLRGQSRISEEDVEEVVKDIQRSLLQADVDVDLVMELSNAIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + + + +++EL ++ G + P + + IM GL GSGKTTT K
Sbjct: 61 LEEEPPAGTSAHDWVLRVVYDELVGLV--GDSTDLPLESQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DT R GA+DQ K+ A +A++ FYG DPVRIA EG+E
Sbjct: 117 MAWWFSKKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDADDPVRIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GR L +++ + PD + V+D+++GQ+A DQAQ F+ S+
Sbjct: 175 TEDADIRIVDTAGRDGLNEELIDQIEDIEAEVQPDRDLLVLDAAMGQSAKDQAQEFEDSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVNETGSSIAFLGTGETVSDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ E ++ + + EG FTL M +Q + + KMGP+ QV M+PG
Sbjct: 295 KQLTERVERAMEETGEEEDDWDPEDMMEGTFTLHDMRKQMETMNKMGPLDQVMDMIPGMG 354
Query: 358 SELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
LM P +Q +++ + +MDSMT EEL+ NP+ + SRI RIARGSG+
Sbjct: 355 GGLMDQLPDDAMDVTQERLQDFEVVMDSMTEEELE--NPRTVGKSRIERIARGSGKPEER 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
+ E+LE+Y + ++ + +G+
Sbjct: 413 IRELLEQYNAMRQMLDQFQGM 433
>gi|385804856|ref|YP_005841256.1| signal recognition particle protein [Haloquadratum walsbyi C23]
gi|339730348|emb|CCC41677.1| signal recognition particle 54K protein [Haloquadratum walsbyi C23]
Length = 466
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 263/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV+ LV E+ ++I+
Sbjct: 1 MVLDNLGSSLRGSLDKLQGKSRLDEDDVEEIVKEIQRSLLSADVEVSLVMELSSSIEDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + R + + ++ EL ++ G + P K + I+ GLQGSGKTT+ K
Sbjct: 61 TGEEPPAGTSARDHVLRIVYEELVDLV--GDSTDLPLKSQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ +Q +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEQMCERAEVSFYGDPDCDDPVKIAREGIEATT 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH EA L +E+ + PD + V+D++IGQ A QA+ F ++
Sbjct: 177 --DADIHIVDTAGRHALEADLIDEIEAIDSTVAPDRSLLVLDAAIGQGAKQQAREFNNAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V+VTK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVVTKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPE---LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ + Q+ + + + EG+FTL+ M +Q + + +MGP+ QV M+PG
Sbjct: 295 KQLSERVERAMAETQEADDDWDPEDIMEGSFTLKDMRKQMEAMDRMGPLDQVMDMIPGLG 354
Query: 358 SEL---MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
L +P +Q +++ + +MDSMT EL+ +P+ + SR+ RIARGSG
Sbjct: 355 GGLKDQLPDDAMDVTQNRMRDFDVIMDSMTEAELE--DPRSVGASRVRRIARGSGTDEET 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V E+L+++K + + + +G+
Sbjct: 413 VRELLQQHKMMERTIKQFQGM 433
>gi|379003325|ref|YP_005258997.1| Signal recognition particle GTPase [Pyrobaculum oguniense TE7]
gi|375158778|gb|AFA38390.1| Signal recognition particle GTPase [Pyrobaculum oguniense TE7]
Length = 433
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 255/424 (60%), Gaps = 9/424 (2%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
S+ + ++ IDE L E EI R LL+ADV LV+ N K + + AG
Sbjct: 9 SKLVDKIRGVEYIDEATLQEIAREIQRTLLKADVPLDLVKTFTDNAVKRIREEKPPAGIP 68
Query: 71 KRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
R + ++ EL K++ +P+ F P K KP +++ +G++GSGKTTT K A Y K+G
Sbjct: 69 PREYLIYVLYEELVKLMGGEQPAEFKPTK-KPYIVLLLGVEGSGKTTTSAKLARYLMKRG 127
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K +V DT R AFDQLKQ A K PFYG D V IA GV K D++I+
Sbjct: 128 YKVGMVETDTIRPAAFDQLKQLAEKIGAPFYGERDGKDAVEIARRGVTNLK--GVDVLII 185
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DT+GRH+ E AL +E++ + +A NPD V+ V+D+++G+ A QA+AF + + + VI+TK
Sbjct: 186 DTAGRHRNEEALLQEVKAIYDAVNPDEVVLVVDATVGKLAAAQAEAFMKYLPIHTVIITK 245
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
MD A+GGGAL+AVA T + V FIG GE ++E E F+ + FV+RLLGMGD ++KI
Sbjct: 246 MDSTARGGGALAAVAKTGARVKFIGVGEDVEELEPFNPRKFVARLLGMGDLDALLEKIKA 305
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
V ++ L+++ G L +Q +++K+GP+ +VF +LPG + + + + + S
Sbjct: 306 VFEEEEV---LEEIESGRLDLLTFKKQIDSLMKLGPLSKVFQLLPGGLAAKISEEQIELS 362
Query: 370 QAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
Q +K++ ++ SMT EEL NP ++N SRI RIA G+G ++V EML Y+ L K+
Sbjct: 363 QKNLKKWRAILSSMTMEEL--KNPDILNASRIRRIALGAGVTPKDVKEMLTVYENLKKMS 420
Query: 430 SKMK 433
+K
Sbjct: 421 KTLK 424
>gi|433637372|ref|YP_007283132.1| signal recognition particle GTPase [Halovivax ruber XH-70]
gi|433289176|gb|AGB14999.1| signal recognition particle GTPase [Halovivax ruber XH-70]
Length = 465
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 260/449 (57%), Gaps = 20/449 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E + + EI R+LL ADV LV E+ NI+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRISEADVESVVTEIQRSLLSADVDVSLVMELSENIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTELPLEDQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG KPA++ DTFR GA+DQ +Q +A++ FYG DPV IA G+E +
Sbjct: 117 MAWWFSTKGLKPAVIQTDTFRPGAYDQAEQMTERAEVDFYGDPDAEDPVEIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
N D+ IVDT+GRH EA L +E+ ++ +PD + V+D++IGQ A DQA+ F S+
Sbjct: 175 TANADVHIVDTAGRHALEADLIDEIEEIERVVDPDTSLLVLDAAIGQGAKDQAREFHDSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE +D+ E F+ + F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVDQTDSSIAFLGTGEEVDDIERFEPEGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+ +++ ++ D PE ++ +GNFTL M +Q + + MGP+ QV M+P
Sbjct: 295 AQLAERVERAMDQTDIEEDDWDPE---EMLQGNFTLNDMQKQLEAMNNMGPLSQVLDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
G + +P ++ ++ + +MDSMT+ E P+ + S+I RIARGSG
Sbjct: 352 GMGGGIKDQLPDDAMDVTEERMHTFRVVMDSMTDAE--KEYPRAIGASQIERIARGSGTS 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGLKIPKK 440
V E+LE++K + + + +G+ K+
Sbjct: 410 EESVRELLEQFKLMERTMKQFQGMGSEKE 438
>gi|15897850|ref|NP_342455.1| Signal recognition particle protein subunit SRP54 (srp54)
[Sulfolobus solfataricus P2]
gi|21362961|sp|Q97ZE7.1|SRP54_SULSO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|13814155|gb|AAK41245.1| Signal recognition particle protein subunit SRP54 (srp54)
[Sulfolobus solfataricus P2]
Length = 447
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/409 (40%), Positives = 253/409 (61%), Gaps = 12/409 (2%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + ++ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY+++K
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKK 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + + YG +P+ IA +GV+ F K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKNKMDII 182
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +E L EEM+++ + PD VI V+D+SIGQ A+D A F Q+ +G+V
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASIGQKAYDLASRFHQASPIGSV 242
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAV AT + + FIGTGE +DE E F+ K FVSR+LGMGD ++
Sbjct: 243 IITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELETFNAKRFVSRILGMGDIESILE 302
Query: 306 KIHEVVPMDQQPELLQKLSE--GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPK 363
K+ + D+ + ++ + E G TLR +Y Q + KMGP+ +V +PG ++P
Sbjct: 303 KVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYAQIIALRKMGPLSKVLQHIPGLGI-MLPT 361
Query: 364 GRE---KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSG 409
E K + KI+R++ ++SMT +EL+ NP +++ SR+ RIA GSG
Sbjct: 362 PSEDQLKIGEEKIRRWLAALNSMTYKELE--NPNIIDKSRMRRIAEGSG 408
>gi|435845547|ref|YP_007307797.1| signal recognition particle GTPase [Natronococcus occultus SP4]
gi|433671815|gb|AGB36007.1| signal recognition particle GTPase [Natronococcus occultus SP4]
Length = 464
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/449 (37%), Positives = 262/449 (58%), Gaps = 20/449 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E + E + EI R+LL ADV LV E+ +I++
Sbjct: 1 MVLDDLGTSLRGTLDKLRGKSRISEDDIEEIVKEIQRSLLSADVDVSLVMELSDSIEERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTDLPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA+V DTFR GA+DQ K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVVQTDTFRPGAYDQAKEMCERAEVDFYGNPDADDPVEIARNGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ +A PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEDAVEPDKSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T+S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTESSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ +V + PE + G FTL M +Q + + MGP+ QV M+P
Sbjct: 295 GQLAERVERAMQQTDVEEEEWDPE---DMLTGQFTLNDMQKQMEAMNNMGPLDQVMDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P +Q +++ Y +MDSMT E + PK + S+I RIARGSG
Sbjct: 352 GFGGGIKDQLPDDAMDVTQERMRAYSVIMDSMT--ETEKEYPKAIGASQIERIARGSGTS 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGLKIPKK 440
+V E+LE+YK + + + +G+ K+
Sbjct: 410 EDQVRELLEQYKMMERTIKQFQGMGSDKE 438
>gi|39654777|pdb|1QZW|A Chain A, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
gi|39654779|pdb|1QZW|C Chain C, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
gi|39654781|pdb|1QZW|E Chain E, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
gi|39654783|pdb|1QZW|G Chain G, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
gi|39654785|pdb|1QZX|A Chain A, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
gi|39654786|pdb|1QZX|B Chain B, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
Length = 440
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/409 (40%), Positives = 253/409 (61%), Gaps = 12/409 (2%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + ++ ++L+ +DV KLV + IK+ +N + +
Sbjct: 12 NIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 71
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY+++K
Sbjct: 72 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKK 130
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + + YG +P+ IA +GV+ F K D+I
Sbjct: 131 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKNKMDII 190
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +E L EEM+++ + PD VI V+D+SIGQ A+D A F Q+ +G+V
Sbjct: 191 IVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASIGQKAYDLASRFHQASPIGSV 250
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAV AT + + FIGTGE +DE E F+ K FVSR+LGMGD ++
Sbjct: 251 IITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELETFNAKRFVSRILGMGDIESILE 310
Query: 306 KIHEVVPMDQQPELLQKLSE--GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPK 363
K+ + D+ + ++ + E G TLR +Y Q + KMGP+ +V +PG ++P
Sbjct: 311 KVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYAQIIALRKMGPLSKVLQHIPGLGI-MLPT 369
Query: 364 GRE---KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSG 409
E K + KI+R++ ++SMT +EL+ NP +++ SR+ RIA GSG
Sbjct: 370 PSEDQLKIGEEKIRRWLAALNSMTYKELE--NPNIIDKSRMRRIAEGSG 416
>gi|448424654|ref|ZP_21582510.1| signal recognition particle protein Srp54 [Halorubrum terrestre JCM
10247]
gi|448481727|ref|ZP_21605057.1| signal recognition particle protein Srp54 [Halorubrum arcis JCM
13916]
gi|448504282|ref|ZP_21613899.1| signal recognition particle protein Srp54 [Halorubrum distributum
JCM 9100]
gi|448521573|ref|ZP_21618231.1| signal recognition particle protein Srp54 [Halorubrum distributum
JCM 10118]
gi|445681864|gb|ELZ34289.1| signal recognition particle protein Srp54 [Halorubrum terrestre JCM
10247]
gi|445702163|gb|ELZ54123.1| signal recognition particle protein Srp54 [Halorubrum distributum
JCM 9100]
gi|445702513|gb|ELZ54461.1| signal recognition particle protein Srp54 [Halorubrum distributum
JCM 10118]
gi|445821674|gb|EMA71461.1| signal recognition particle protein Srp54 [Halorubrum arcis JCM
13916]
Length = 463
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 263/444 (59%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ +PD + V+D++IGQ A DQA+ F++S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEGVVDPDRSLLVLDAAIGQGAKDQARQFEKSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQ------PELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ + Q+ PE + +G FTL+ M Q + KMGP+ QV M+P
Sbjct: 295 KQLSERVERAMQETQEEDGDWDPE---DMLQGEFTLKDMKRQMDAMNKMGPLDQVMDMIP 351
Query: 355 GFSSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
G +M P +Q +++R+ +MDSMT EEL+ NP+++ SR+ RIARGSG
Sbjct: 352 GLGGGMMDELPDDAMDVTQDRMRRFERIMDSMTEEELE--NPRVVGQSRVERIARGSGTD 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
V ++LE++ + + + +G+
Sbjct: 410 EETVQQLLEQHSMMEETIGQFQGM 433
>gi|292659708|pdb|3KL4|A Chain A, Recognition Of A Signal Peptide By The Signal Recognition
Particle
Length = 433
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/409 (40%), Positives = 253/409 (61%), Gaps = 12/409 (2%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + ++ ++L+ +DV KLV + IK+ +N + +
Sbjct: 5 NIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 64
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY+++K
Sbjct: 65 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKK 123
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + + YG +P+ IA +GV+ F K D+I
Sbjct: 124 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKNKMDII 183
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +E L EEM+++ + PD VI V+D+SIGQ A+D A F Q+ +G+V
Sbjct: 184 IVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASIGQKAYDLASRFHQASPIGSV 243
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAV AT + + FIGTGE +DE E F+ K FVSR+LGMGD ++
Sbjct: 244 IITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELETFNAKRFVSRILGMGDIESILE 303
Query: 306 KIHEVVPMDQQPELLQKLSE--GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPK 363
K+ + D+ + ++ + E G TLR +Y Q + KMGP+ +V +PG ++P
Sbjct: 304 KVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYAQIIALRKMGPLSKVLQHIPGLGI-MLPT 362
Query: 364 GRE---KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSG 409
E K + KI+R++ ++SMT +EL+ NP +++ SR+ RIA GSG
Sbjct: 363 PSEDQLKIGEEKIRRWLAALNSMTYKELE--NPNIIDKSRMRRIAEGSG 409
>gi|389845623|ref|YP_006347862.1| signal recognition particle protein [Haloferax mediterranei ATCC
33500]
gi|448616760|ref|ZP_21665470.1| signal recognition particle protein Srp54 [Haloferax mediterranei
ATCC 33500]
gi|388242929|gb|AFK17875.1| signal recognition particle 54K protein [Haloferax mediterranei
ATCC 33500]
gi|445751415|gb|EMA02852.1| signal recognition particle protein Srp54 [Haloferax mediterranei
ATCC 33500]
Length = 464
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/432 (37%), Positives = 262/432 (60%), Gaps = 20/432 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVGLI--GESTDIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA +G+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ ++ IVDT+GRH E L E+ ++ PDL + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TEDAEVHIVDTAGRHALEDDLIAEIEEIESVVQPDLNMLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIGFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ + D PE ++ +G+FTL+ M +Q + + KMGP+ QV M+P
Sbjct: 295 KQLSERVERAMSETQAEDEDWDPE---EMMQGSFTLKDMQKQMEAMNKMGPLDQVLDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P ++ +++ + +MDSMT EEL+ NP+ + SR+ RI++GSG+
Sbjct: 352 GFGGGIKDQLPDDAMDVTKDRMRSFEVIMDSMTEEELE--NPRKVGASRVKRISQGSGQD 409
Query: 412 VREVMEMLEEYK 423
+ E+LE+++
Sbjct: 410 EETIQELLEQHR 421
>gi|335441201|ref|ZP_08561922.1| signal recognition particle protein Srp54 [Halorhabdus tiamatea
SARL4B]
gi|334888372|gb|EGM26671.1| signal recognition particle protein Srp54 [Halorhabdus tiamatea
SARL4B]
Length = 465
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 267/441 (60%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ A+ + + I E+ + + EI R+LLQADV LV ++ +I+
Sbjct: 1 MVLDDLGSSLRGALDGLRGKSRISEEDVQAVVKEIQRSLLQADVDVDLVMDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + R + + ++ EL +++ G+ + P + P I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTSARDWVLRIVYEELVELV--GESTELPLE--PQTIVLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DT+R GA++Q ++ A +A++ FYG E D V+IA EG+E
Sbjct: 117 IAWWFSKKGLRPAVIQTDTWRPGAYEQAEEMAERAEVDFYGDPDEDDAVKIAREGLEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ + +PD + V+D++IGQ A +QA F+ +V
Sbjct: 177 --DADVQIVDTAGRHALEDGLIDELEDIESVADPDHNLLVLDAAIGQEAKEQASRFEGAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGTGETVKDVERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPE---LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ + Q+ E + + +G FTL+ M +Q + + KMGP+ QV M+PG
Sbjct: 295 KQLTERVERAMEETQEEEGDWGPEDMLDGEFTLKDMRKQMEAMNKMGPLDQVMDMIPGLG 354
Query: 358 SELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
+M P +Q +++ + +MDSMT++EL+ NP+ + SR RIARGSG+
Sbjct: 355 GGMMDQLPDDAMDVTQERMRDFEVIMDSMTDDELE--NPRQIGRSRTERIARGSGKPEER 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
+ E+LE++K + + ++ +G+
Sbjct: 413 IRELLEQHKMMDRTLNQFQGM 433
>gi|284175659|ref|ZP_06389628.1| Signal recognition particle protein subunit SRP54 (srp54)
[Sulfolobus solfataricus 98/2]
gi|384434404|ref|YP_005643762.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Sulfolobus solfataricus 98/2]
gi|261602558|gb|ACX92161.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Sulfolobus solfataricus 98/2]
Length = 447
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 164/409 (40%), Positives = 253/409 (61%), Gaps = 12/409 (2%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + ++ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY+++K
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKK 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + + YG +P+ IA +GV+ F K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKNKMDII 182
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +E L EEM+++ + PD VI V+D+SIGQ A+D A F Q+ +G++
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASIGQKAYDLASRFHQASPIGSI 242
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAV AT + + FIGTGE +DE E F+ K FVSR+LGMGD ++
Sbjct: 243 IITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELETFNAKRFVSRILGMGDIESILE 302
Query: 306 KIHEVVPMDQQPELLQKLSE--GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPK 363
K+ + D+ + ++ + E G TLR +Y Q + KMGP+ +V +PG ++P
Sbjct: 303 KVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYAQIIALRKMGPLSKVLQHIPGLGI-MLPT 361
Query: 364 GRE---KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSG 409
E K + KI+R++ ++SMT +EL+ NP +++ SR+ RIA GSG
Sbjct: 362 PSEDQLKIGEEKIRRWLAALNSMTYKELE--NPNIIDKSRMRRIAEGSG 408
>gi|448303902|ref|ZP_21493848.1| signal recognition particle protein Srp54 [Natronorubrum
sulfidifaciens JCM 14089]
gi|445592529|gb|ELY46716.1| signal recognition particle protein Srp54 [Natronorubrum
sulfidifaciens JCM 14089]
Length = 460
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/449 (37%), Positives = 261/449 (58%), Gaps = 20/449 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q +Q A +A++ +YG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAQQMAGRAEVDYYGNPDSEDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ E+ D +PE + G FTL M +Q + + MGP+ QV M+P
Sbjct: 295 GQLAERVERAMEQTEIEDDDWEPE---DMLSGQFTLNDMQKQMEAMNNMGPLDQVMDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P +Q +++ + +MDSMT+ E PK + S+I RIARGSG
Sbjct: 352 GFGGGIKDQLPDDAMDVTQERMRTFSVIMDSMTDAE--KEYPKAIGASQIERIARGSGTN 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGLKIPKK 440
V E+L++YK + K + +G+ K+
Sbjct: 410 EENVRELLQQYKMMEKTIKQFQGMGSEKE 438
>gi|448435673|ref|ZP_21586809.1| signal recognition particle protein Srp54 [Halorubrum
tebenquichense DSM 14210]
gi|445683398|gb|ELZ35794.1| signal recognition particle protein Srp54 [Halorubrum
tebenquichense DSM 14210]
Length = 464
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 261/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ T + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKTTLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTARDHVLRIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L +E+ ++ +PD + V+D++IGQ A +QA+ F+ S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIDEIEEIEGVVDPDRSLLVLDAAIGQGAKEQARQFEASI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ + Q + + +G FTL+ M Q + KMGP+ QV M+PG
Sbjct: 295 KQLSERVERAMQETQDEDDDWDPEDMLKGEFTLKDMKRQMDAMNKMGPLDQVMDMIPGLG 354
Query: 358 SELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
+M P +Q +++R+ +MDSMT EEL+ NP+++ SR+ RIARGSG
Sbjct: 355 GGMMDELPDDAMDVTQDRMRRFERIMDSMTEEELE--NPRVVGQSRVERIARGSGTDEET 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V ++LE++ + + + +G+
Sbjct: 413 VQQLLEQHSMMEETIGQFQGM 433
>gi|409721153|ref|ZP_11269367.1| signal recognition particle protein Srp54 [Halococcus hamelinensis
100A6]
gi|448722162|ref|ZP_21704701.1| signal recognition particle protein Srp54 [Halococcus hamelinensis
100A6]
gi|445790153|gb|EMA40823.1| signal recognition particle protein Srp54 [Halococcus hamelinensis
100A6]
Length = 468
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/440 (37%), Positives = 262/440 (59%), Gaps = 13/440 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T +D + E + EI R+L+QADV+ LV ++ I+
Sbjct: 1 MVLDDLGSSLRGTLNRLQGKTRLDADDVEEVVREIQRSLIQADVEISLVMDLSDRIEDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ ++ G+ + P + + I+ GLQGSGKTTT K
Sbjct: 61 LNEEPPGGTTARDFVLRIVYEEMVDLV--GESTDLPLESQ--TILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ A +A++ FYG DPV IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQSKQMAERAEVTFYGDPDSDDPVEIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ ++ IVDT+GRH E L +E+R + + PD + VMD++IGQ A DQA+ F+ ++
Sbjct: 175 ADEAEVKIVDTAGRHALEDDLIDEIRAIDDVVQPDRSLLVMDAAIGQGAKDQARRFEDAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVV--PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
+++ + D++ +++ +G FTL+ M Q + KMGP+ QV M+PG
Sbjct: 295 KQLAERVERAMETTDDEEDWDPEEILQGQFTLKDMRHQMDAMNKMGPLDQVLDMIPGLGG 354
Query: 359 EL---MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREV 415
L +P +Q +++ + +MDSMT+ EL+ NP+ + S+ RIARGSG+ V
Sbjct: 355 GLKDQLPDDAMDVTQDRMRSFDIVMDSMTDSELE--NPRSVGASQTRRIARGSGQPEERV 412
Query: 416 MEMLEEYKRLAKIWSKMKGL 435
E+LE+++ + + + +G+
Sbjct: 413 RELLEQHRMMERTLKQFQGM 432
>gi|14601593|ref|NP_148133.1| signal recognition 54 kDa protein [Aeropyrum pernix K1]
gi|12230645|sp|Q9YB62.1|SRP54_AERPE RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|5105423|dbj|BAA80736.1| signal recognition 54 kDa protein [Aeropyrum pernix K1]
Length = 441
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/428 (38%), Positives = 258/428 (60%), Gaps = 8/428 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
+ RA+ + + EK ++ + ++ R L++ADV KLV + IK+ ++ G
Sbjct: 5 VRRAVAKFLRGGGVYEKAVDAFVKDLQRELIKADVNVKLVLNVTRRIKERALKEEPPPGV 64
Query: 70 NKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
+R + + ++ EL K+ + P P K P +++ VG+QGSGKTTT K AYY+ ++
Sbjct: 65 TRRDWMIKIVYEELVKLFGGDQEPQVDPPK-TPWIVLLVGVQGSGKTTTAGKLAYYYVRR 123
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G+K LV +DT R GA++QLK+ A +A FYG E DP IA G+E +++I
Sbjct: 124 GYKVGLVSSDTHRPGAYEQLKRLAEEAGAMFYGE-REGDPAEIARRGLEDLLSRGAEIVI 182
Query: 189 VDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVI 246
VDT+GRH +EA L +EM+ ++ PD V V+D+SIGQ A A+ F +S +G++I
Sbjct: 183 VDTAGRHGHGEEARLLDEMKAIASKVRPDEVALVIDASIGQKAMGLAERFHKSTPIGSII 242
Query: 247 VTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDK 306
VTKMDG A+GGGAL+A A T + + FIGTGE + E E F + FV+R+LGMGD +++
Sbjct: 243 VTKMDGTARGGGALTAAAVTGARIKFIGTGETLGELEPFAPRRFVARILGMGDLESLLER 302
Query: 307 IHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS-ELMPKGR 365
I + + + + +G T+R +Y Q + + K+GP+G+V MLPG S + +G
Sbjct: 303 IKSLEEAGELDRAAEDVLKGRITMRTIYRQLRAMRKLGPLGKVLQMLPGASMLASIDEGA 362
Query: 366 EKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRL 425
K + K+KR+M +++SMT EELD P++++ R+ RIA GSG V +V E+L YK L
Sbjct: 363 LKLGEEKMKRWMAIIESMTYEELD--RPEIIDKRRMRRIAIGSGTSVDDVRELLVYYKNL 420
Query: 426 AKIWSKMK 433
+ K+K
Sbjct: 421 KTMMKKLK 428
>gi|300709660|ref|YP_003735474.1| signal recognition 54 kDa protein [Halalkalicoccus jeotgali B3]
gi|448297569|ref|ZP_21487615.1| signal recognition particle protein Srp54 [Halalkalicoccus jeotgali
B3]
gi|299123343|gb|ADJ13682.1| signal recognition 54 kDa protein [Halalkalicoccus jeotgali B3]
gi|445579878|gb|ELY34271.1| signal recognition particle protein Srp54 [Halalkalicoccus jeotgali
B3]
Length = 462
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/441 (37%), Positives = 259/441 (58%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++++ + + E+ + + EI R+LLQADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRGTLEELRGKSRLTEEDVQAVVKEIQRSLLQADVDVSLVMELSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ EL ++ G + P + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDHVLRIVYEELVALV--GDSTELPLE--EQTIMLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGDPDAEDPVEIARRGME--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ + EA PD + V+D++IGQ A +QA+ F++S+
Sbjct: 175 TADADVHIVDTAGRHALEDELIKEIEAIGEAVEPDRSLLVLDAAIGQGAKEQARRFEESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGGAL+AV T S + F+GTGE +D+ E F+ F+SRLLGMGD
Sbjct: 235 GIQGVAITKLDGTAKGGGALTAVNETDSTIAFLGTGEEVDDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ + Q + + L G FTL M +Q + +MGP+ Q+ M+PG
Sbjct: 295 KQLTERVERAMAETQEEEEDWDPEDLLSGTFTLHDMRKQMNAMNRMGPLDQIMDMIPGLG 354
Query: 358 SELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
LM P +Q +++R+ +MDSMT+ EL+ +P+ + S+I RIARGSG
Sbjct: 355 GGLMDQLPDDAMDVTQDRLRRFEFVMDSMTDAELE--HPRAIGQSQIERIARGSGTDEET 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V E+L+++K + + + +G+
Sbjct: 413 VRELLQQHKMMERTLKQFQGM 433
>gi|124365569|gb|ABN09803.1| GTP-binding signal recognition particle SRP54, G-domain [Medicago
truncatula]
Length = 314
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/335 (51%), Positives = 208/335 (62%), Gaps = 52/335 (15%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M LA LGG I R +MSN T+ID+++ C+NEITRA +Q+ ++ KL+R+M IK I+
Sbjct: 1 MGLADLGGRILRGFDKMSNETVIDKEIRKRCVNEITRAFIQSIIEPKLIRDMHAKIKNII 60
Query: 61 ----NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
NLDD A R++IQQ PS GKTT
Sbjct: 61 YNHLNLDDFDAA---RKMIQQV----------------------PSC--------CGKTT 87
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC ++A ++QKKG K LVC DT R GAFDQLKQ + IP YG R E
Sbjct: 88 TCAQFANHYQKKGLKTGLVCTDTLRNGAFDQLKQIYAETNIPCYGRVGYCQNCR---ERC 144
Query: 177 ETFKKENCDLIIVDTSGRHKQEA-ALFEEMRQVSEATNPDLVIFVMDSSIGQAAFD---- 231
+ NCDLIIVD SG HKQE AL EE+ QVS+AT PDLVI V+D +IGQ AFD
Sbjct: 145 GQMQGGNCDLIIVDVSGGHKQEEDALIEEIHQVSKATKPDLVILVIDGNIGQHAFDHRSL 204
Query: 232 -QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 290
QA AF QSV +GAVIV+KMDG+A GGG+LSAVAATKS VIFIGTGEHMDEFEVF+VKPF
Sbjct: 205 KQATAFTQSVDIGAVIVSKMDGYAMGGGSLSAVAATKSSVIFIGTGEHMDEFEVFEVKPF 264
Query: 291 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSE 325
VS LLGM DW F+D+++EV PEL L E
Sbjct: 265 VSSLLGMDDWYEFIDRVYEV------PELPLNLPE 293
>gi|307353993|ref|YP_003895044.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Methanoplanus petrolearius DSM 11571]
gi|307157226|gb|ADN36606.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanoplanus petrolearius DSM 11571]
Length = 441
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 165/426 (38%), Positives = 260/426 (61%), Gaps = 11/426 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG + A+++++ T+ID+ + E + ++ R LLQADV KLV + IK+
Sbjct: 1 MLDRLGSGLKDALKKLAGKTVIDKAAVEELVKDLQRVLLQADVNVKLVMNLSKAIKQRSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + R + + ++ EL ++ G P I+ GLQGSGKTTT K
Sbjct: 61 EEEPPKGMSVREHVLRIVYQELVNLMGE---EIEVTLG-PQTILMAGLQGSGKTTTTGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
+ Y QKKG + ++CAD FR GA+DQLK K +P YG E + V+I G++ K
Sbjct: 117 SRYFQKKGLRVGVICADVFRPGAYDQLKTLCDKVNVPCYGEPGEINAVKIVENGMKQLK- 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
N +++I+DT GRH E L +E+ ++++ + V+D+++GQ A +QA F +++
Sbjct: 176 -NAEVLIIDTQGRHALEDELIDEIIKINDLSKASHRWLVLDAALGQQAREQAARFHDAIN 234
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+ VI+TKMDG AKGGGALSAVA T S ++F+G+GE +D+ E FD F+SRLLGMGD
Sbjct: 235 IDGVIITKMDGTAKGGGALSAVAETGSGIVFVGSGETIDDLERFDPDSFISRLLGMGDLK 294
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
+++ E + ++ + + +G FTLR MY+Q +++ KMGP+ QV SMLP + E+
Sbjct: 295 SLIERAEEAINAEEVD--VNAMMKGKFTLRDMYKQLESLKKMGPLKQVMSMLPLGNIEI- 351
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
P+ + K++ Y +MDSMTNEELD +P +++ SRI RIA G+G EV E+L+
Sbjct: 352 PEDAFDTTGKKMEAYKVIMDSMTNEELD--DPSVIHASRIQRIATGAGVSQEEVRELLKY 409
Query: 422 YKRLAK 427
+K + +
Sbjct: 410 HKTMQR 415
>gi|289581472|ref|YP_003479938.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Natrialba magadii ATCC 43099]
gi|448283112|ref|ZP_21474391.1| signal recognition particle protein Srp54 [Natrialba magadii ATCC
43099]
gi|289531025|gb|ADD05376.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Natrialba magadii ATCC 43099]
gi|445574820|gb|ELY29308.1| signal recognition particle protein Srp54 [Natrialba magadii ATCC
43099]
Length = 464
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 168/444 (37%), Positives = 259/444 (58%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGSLDKLRGKSRISEEDVEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A +A++ FYG+ DPV IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTFRPGAYDQAKEMAGRAEVDFYGNPDNDDPVEIARKGLEATS 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L E+ Q+ PD + V+D++IGQ A +QAQ F +S+
Sbjct: 177 E--ADVHIVDTAGRHALEDDLIAEIEQIEGVVEPDTSLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDSFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ ++ D PE + +G FTL M +Q + + MGP+ QV M+P
Sbjct: 295 GQLAERVERAMEQTQIEDDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P +Q ++ + +MDSMT+ E PK + S+I RIARGSG
Sbjct: 352 GFGGGIKDQLPDDAMDVTQERMHSFSVIMDSMTDAE--KEYPKAIGASQIERIARGSGTS 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
+V E+L++YK + K + +G+
Sbjct: 410 EEQVRELLQQYKMMEKTIKQFQGM 433
>gi|219851208|ref|YP_002465640.1| signal recognition particle protein Srp54 [Methanosphaerula
palustris E1-9c]
gi|219545467|gb|ACL15917.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanosphaerula palustris E1-9c]
Length = 440
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 167/436 (38%), Positives = 264/436 (60%), Gaps = 17/436 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG S+ A+++++ T++D + E + ++ RAL+Q+DV KLV + IK
Sbjct: 1 MLDRLGSSLKDALKKLAGKTVVDRAAVEELVKDLQRALIQSDVNVKLVMNLSQAIKTRSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G R + + ++ EL ++ P G+ +++M GLQGSGKTTT K
Sbjct: 61 EEEPLKGMGVREHVLRIVYQELVGLMGP---EVEVTLGQQTILM-AGLQGSGKTTTTAKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y Q+KG + A++C DTFR GA+ Q+ K +P +G E+D V+I +G+++ +
Sbjct: 117 ARYFQRKGLRVAVICGDTFRPGAYQQISTLCQKINVPCFGDPNETDAVKIVTKGLKSVGQ 176
Query: 182 ENCDLIIVDTSGRHKQEAALFEE---MRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
+++I+DT GRH E L +E + +S+AT+ LVI D+++GQ A +QA+ F Q
Sbjct: 177 --AEVLIIDTQGRHALEEGLIQEIVDLNTLSKATHRWLVI---DAALGQQASEQARRFHQ 231
Query: 239 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 298
++ + VI+TKMDG AKGGGALSAVA TKS ++FIG+GE +++ E FD F+SRLLGMG
Sbjct: 232 AIDIDGVIITKMDGTAKGGGALSAVAETKSGIVFIGSGETIEDLERFDPDGFISRLLGMG 291
Query: 299 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
D +++ E + + + + G FTLR MY+Q + + KMGP+ Q+ SMLP +
Sbjct: 292 DLKALVERAEEAITTEDVD--VNSMLRGKFTLRDMYKQLEAVNKMGPLKQIMSMLP-LGN 348
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
+P + + K+ RY +MDSMTNEELD +P ++ SR+ RIA G+G EV E+
Sbjct: 349 VDIPNDVYEVTGTKMVRYRIIMDSMTNEELD--DPAVIGSSRMHRIATGAGASPDEVREL 406
Query: 419 LEEYKRLAKIWSKMKG 434
L +K + + M+G
Sbjct: 407 LRYHKTMQRALKGMRG 422
>gi|448380959|ref|ZP_21561316.1| signal recognition particle protein Srp54 [Haloterrigena
thermotolerans DSM 11522]
gi|445663615|gb|ELZ16358.1| signal recognition particle protein Srp54 [Haloterrigena
thermotolerans DSM 11522]
Length = 464
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 262/446 (58%), Gaps = 14/446 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ +IK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ ++ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEEMAERAEVEFYGNPDSEDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
S +++ E M++ + + +G FTL M +Q + + MGP+ QV M+PG
Sbjct: 295 SQLAERVERAMEQTEMEEDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIPGLG 354
Query: 358 S---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
+ +P +Q +++ + +MDSMT+ E PK + S+I RIARGSG E
Sbjct: 355 GGIKDQLPDDAMDVTQERMRTFSVIMDSMTDAE--KEYPKAIGASQIQRIARGSGTSEEE 412
Query: 415 VMEMLEEYKRLAKIWSKMKGLKIPKK 440
V E+L++YK + + + +G+ K+
Sbjct: 413 VRELLQQYKMMERTIKQFQGMGSEKE 438
>gi|336252741|ref|YP_004595848.1| Signal recognition 54 kDa protein [Halopiger xanaduensis SH-6]
gi|335336730|gb|AEH35969.1| Signal recognition 54 kDa protein [Halopiger xanaduensis SH-6]
Length = 464
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 261/444 (58%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E+ + E + EI R+L+ ADV LV+E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRISEEDVEEIVKEIQRSLISADVDISLVQELSGNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q ++ A +A++ +YG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAEEMAGRAEVDYYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
S +++ E D PE + +G FTL M +Q + + MGP+ QV M+P
Sbjct: 295 SQLAERVERAMLETETEEDDWDPE---DMLQGQFTLHDMQKQMEAMNNMGPLDQVMDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P +Q +++ + +MDSMT E + PK + S+I RIA+GSG
Sbjct: 352 GFGGGIKDQLPDDAMDVTQERMRSFSVIMDSMT--EAEKEYPKAIGASQIERIAKGSGTS 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
+V E+L++YK + K + +G+
Sbjct: 410 EDQVRELLQQYKMMEKTIKQFQGM 433
>gi|397779468|ref|YP_006543941.1| Signal recognition 54 kDa protein [Methanoculleus bourgensis MS2]
gi|396937970|emb|CCJ35225.1| Signal recognition 54 kDa protein AltName: Full=SRP54
[Methanoculleus bourgensis MS2]
Length = 442
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/423 (39%), Positives = 261/423 (61%), Gaps = 12/423 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ A+++++ T+ID ++E + ++ RALLQADV KLV ++ IK+
Sbjct: 1 MLDNLGASLKDAVKKLAGKTVIDRAAVDELVRDLQRALLQADVNVKLVMQLSQAIKQRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ EL +++ PG + P+ I+ GLQGSGKTTT K
Sbjct: 61 DEEPPKGMGAREHVLRIVYQELVRLMGTPGAVTLGPQ-----TILMAGLQGSGKTTTTAK 115
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + Q+KG + ++CADTFR GA+DQLK + +P +G E D ++I EG+ F+
Sbjct: 116 LARFFQRKGLRVGVICADTFRPGAYDQLKTLCDRISVPCFGDPKEPDALKIVREGLPRFR 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K ++II+DT GRH E L EE+ ++E ++ D V+D+++GQ A +QA+ F +++
Sbjct: 176 K-LYEVIIIDTQGRHALEEHLIEEIININEISHADHRWLVIDAALGQQASEQARRFHEAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V+VTKMDG A+GGGALSAVA T+S ++FIG+GE +++ E F+ F+SRLLGMGD
Sbjct: 235 GIDGVLVTKMDGTARGGGALSAVAETQSGIVFIGSGETIEDLERFNPDGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+++ E V + + + +G FTLR MY+Q + + KMGP+ Q+ SMLP
Sbjct: 295 KALVERAEEAVSAEDID--VNAMLKGKFTLRDMYKQLEALNKMGPLKQIMSMLP-LGGMQ 351
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+P + K+ RY +MDSMT ELD +P ++ SR+ RIARG+G +V ++++
Sbjct: 352 IPDDAYDITSTKMARYKVIMDSMTPSELD--DPAVIGSSRVQRIARGAGVAPEDVRDLIK 409
Query: 421 EYK 423
YK
Sbjct: 410 YYK 412
>gi|433592885|ref|YP_007282381.1| signal recognition particle GTPase [Natrinema pellirubrum DSM
15624]
gi|448335331|ref|ZP_21524480.1| signal recognition particle protein Srp54 [Natrinema pellirubrum
DSM 15624]
gi|433307665|gb|AGB33477.1| signal recognition particle GTPase [Natrinema pellirubrum DSM
15624]
gi|445617570|gb|ELY71166.1| signal recognition particle protein Srp54 [Natrinema pellirubrum
DSM 15624]
Length = 463
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 262/446 (58%), Gaps = 14/446 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ +IK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ ++ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEEMAERAEVEFYGNPDSEDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
S +++ E M++ + + +G FTL M +Q + + MGP+ QV M+PG
Sbjct: 295 SQLAERVERAMEQTEMEEDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIPGLG 354
Query: 358 S---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
+ +P +Q +++ + +MDSMT+ E PK + S+I RIARGSG +
Sbjct: 355 GGIKDQLPDDAMDVTQERMRTFSVIMDSMTDAE--KEYPKAIGASQIQRIARGSGTSEEQ 412
Query: 415 VMEMLEEYKRLAKIWSKMKGLKIPKK 440
V E+L++YK + K + +G+ K+
Sbjct: 413 VRELLQQYKMMEKTIKQFQGMGSEKE 438
>gi|448347056|ref|ZP_21535935.1| signal recognition particle protein Srp54 [Natrinema altunense JCM
12890]
gi|445631393|gb|ELY84625.1| signal recognition particle protein Srp54 [Natrinema altunense JCM
12890]
Length = 464
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 260/444 (58%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+ Q ++ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYQQAEEMAGRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSDADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
S +++ ++ D PE + +G FTL M +Q + + MGP+ QV M+P
Sbjct: 295 SQLAERVERAMEETDIEEDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
G + +P +Q +++ + +MDSMT E + PK + S+I RIARGSG
Sbjct: 352 GLGGGIKDQLPDDAMDVTQERMRTFTVIMDSMT--ETEKEYPKAIGASQIERIARGSGTD 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
+V E+L++YK + + + +G+
Sbjct: 410 EEQVRELLQQYKMMERTMKQFQGM 433
>gi|448357209|ref|ZP_21545915.1| signal recognition particle protein Srp54 [Natrialba chahannaoensis
JCM 10990]
gi|445650017|gb|ELZ02948.1| signal recognition particle protein Srp54 [Natrialba chahannaoensis
JCM 10990]
Length = 462
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 260/444 (58%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGSLDKLRGKSRISEEDVEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A +A++ FYG+ DPV IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTFRPGAYDQAKEMAGRAEVDFYGNPDNDDPVEIARKGLEATS 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ ++ PD + V+D++IGQ A +QAQ F +S+
Sbjct: 177 E--ADVHIVDTAGRHALEDDLIDEIEEIEGVAQPDTSLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDSFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ ++ D PE + +G FTL M +Q + + MGP+ QV M+P
Sbjct: 295 GQLAERVERAMEQTQIEDDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P +Q ++ + +MDSMT+ E PK + S+I RIARGSG
Sbjct: 352 GFGGGIKDQLPDDAMDVTQERMHTFSVIMDSMTDAE--KEYPKAIGASQIERIARGSGTS 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
+V E+L++YK + K + +G+
Sbjct: 410 EEKVRELLQQYKMMEKTIKQFQGM 433
>gi|448450371|ref|ZP_21592270.1| signal recognition particle protein Srp54 [Halorubrum litoreum JCM
13561]
gi|445812223|gb|EMA62219.1| signal recognition particle protein Srp54 [Halorubrum litoreum JCM
13561]
Length = 463
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 164/444 (36%), Positives = 262/444 (59%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L E+ ++ +PD + V+D++IGQ A DQA+ F++S+
Sbjct: 175 TADADVHIVDTAGRHALEDDLIAEIEEIEGVVDPDRSLLVLDAAIGQGAKDQARQFEKSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQ------PELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ + Q+ PE + +G FTL+ M Q + KMGP+ QV M+P
Sbjct: 295 KQLSERVERAMQETQEEDGDWDPE---DMLQGEFTLKDMKRQMDAMNKMGPLDQVMDMIP 351
Query: 355 GFSSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
G +M P +Q +++R+ +MDSMT EEL+ NP+++ SR+ RIARGSG
Sbjct: 352 GLGGGMMDELPDDAMDVTQDRMRRFERIMDSMTEEELE--NPRVVGQSRVERIARGSGTD 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
V ++LE++ + + + +G+
Sbjct: 410 EETVQQLLEQHSMMEETIGQFQGM 433
>gi|448312267|ref|ZP_21502014.1| signal recognition particle protein Srp54 [Natronolimnobius
innermongolicus JCM 12255]
gi|445601867|gb|ELY55848.1| signal recognition particle protein Srp54 [Natronolimnobius
innermongolicus JCM 12255]
Length = 465
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 168/449 (37%), Positives = 261/449 (58%), Gaps = 20/449 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRISEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+ Q K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYQQAKEMCERAEVDFYGNPDNDDPVEIARNGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ + PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSDADVHIVDTAGRHALEDDLIDEIEDIEGVVQPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKIDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ +V D PE + +G+FTL M +Q + + MGP+ QV M+P
Sbjct: 295 GQLAERVERAMEQTQVEEDDWDPE---DMLQGSFTLHDMQKQMEAMNNMGPLDQVMDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P +Q +++++ +MDSMT E + PK + S+I RIARGSG
Sbjct: 352 GFGGGIKDQLPDDAMDVTQDRMRKFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGTS 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGLKIPKK 440
+V E+L++YK + K + +G+ K+
Sbjct: 410 EEDVRELLQQYKMMEKTIKQFQGMGSDKE 438
>gi|448337308|ref|ZP_21526388.1| signal recognition particle protein Srp54 [Natrinema pallidum DSM
3751]
gi|445625973|gb|ELY79324.1| signal recognition particle protein Srp54 [Natrinema pallidum DSM
3751]
Length = 463
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 259/444 (58%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+ Q ++ A +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYQQAEEMAGRAEVDFYGNPDNDDPVEIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSDADVHIVDTAGRHALEEDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
S +++ ++ D PE + +G FTL M +Q + + MGP+ QV M+P
Sbjct: 295 SQLAERVERAMEETDIEEDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
G + +P +Q +++ + +MDSMT E + PK + S+I RIARGSG
Sbjct: 352 GLGGGIKDQLPDDAMDVTQERMRTFTVIMDSMT--ETEKEYPKAIGASQIERIARGSGTD 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
+V E+L++YK + + + +G+
Sbjct: 410 EEQVRELLQQYKMMERTMKQFQGM 433
>gi|397772073|ref|YP_006539619.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Natrinema sp. J7-2]
gi|448342497|ref|ZP_21531447.1| signal recognition particle protein Srp54 [Natrinema gari JCM
14663]
gi|397681166|gb|AFO55543.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Natrinema sp. J7-2]
gi|445625512|gb|ELY78869.1| signal recognition particle protein Srp54 [Natrinema gari JCM
14663]
Length = 464
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 259/444 (58%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+ Q ++ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYQQAEEMAGRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSDADVHIVDTAGRHALEEDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
S +++ ++ D PE + +G FTL M +Q + + MGP+ QV M+P
Sbjct: 295 SQLAERVERAMEETDIEEDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
G + +P +Q +++ + +MDSMT E + PK + S+I RIARGSG
Sbjct: 352 GLGGGIKDQLPDDAMDVTQERMRTFTVIMDSMT--EAEKEYPKAIGASQIERIARGSGTD 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
+V E+L++YK + + + +G+
Sbjct: 410 EEQVRELLQQYKMMERTMKQFQGM 433
>gi|448308178|ref|ZP_21498058.1| signal recognition particle protein Srp54 [Natronorubrum bangense
JCM 10635]
gi|445594431|gb|ELY48589.1| signal recognition particle protein Srp54 [Natronorubrum bangense
JCM 10635]
Length = 463
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 261/444 (58%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRISEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GESTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q +Q A +A++ +YG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAQQMAGRAEVDYYGNPDSEDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A +QA F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKEQASQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ +V D +PE + +G FTL M +Q + + MGP+ QV M+P
Sbjct: 295 GQLAERVERAMEQTQVEDDDWEPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIP 351
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P +Q +++ + +MDSMT+ E PK + S+I RIARGSG
Sbjct: 352 GFGGGIKDQLPDDAMDVTQDRMRTFSVIMDSMTDTE--KEYPKAIGASQIERIARGSGTS 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
+V E+LE+YK + K + +G+
Sbjct: 410 EEKVRELLEQYKMMEKTIKQFQGM 433
>gi|448302117|ref|ZP_21492101.1| signal recognition particle protein Srp54 [Natronorubrum tibetense
GA33]
gi|445582113|gb|ELY36458.1| signal recognition particle protein Srp54 [Natronorubrum tibetense
GA33]
Length = 465
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 262/446 (58%), Gaps = 14/446 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERS 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q ++ A +A++ +YG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAEEMAGRAEVDYYGNPDSEDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEEDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ E M++ + + +G FTL M +Q + + MGP+ QV M+PGF
Sbjct: 295 GQLAERVERAMEQTEMEEDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIPGFG 354
Query: 358 S---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
+ +P +Q ++ + +MDSMT E + PK + S+I RIARGSG +
Sbjct: 355 GGIKDQLPDDAMDVTQERMHTFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGTEEEN 412
Query: 415 VMEMLEEYKRLAKIWSKMKGLKIPKK 440
V E+L++YK + K + +G+ K+
Sbjct: 413 VRELLQQYKMMEKTIKQFQGMGSEKE 438
>gi|452207929|ref|YP_007488051.1| signal recognition particle 54K protein [Natronomonas moolapensis
8.8.11]
gi|452084029|emb|CCQ37362.1| signal recognition particle 54K protein [Natronomonas moolapensis
8.8.11]
Length = 464
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/440 (36%), Positives = 263/440 (59%), Gaps = 13/440 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T + E + + EI R+LL ADV LV + +I++
Sbjct: 1 MVLDDLGSSLRGTLDKLQGKTTLSEDDVEAIVKEIQRSLLSADVDVDLVMALSDSIRERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ E+ +++ G+ + P + + I+ GLQGSGKTTT K
Sbjct: 61 VEEEPPAGTTARDHVLKIVYEEMVELV--GESTDLPLEEQ--TIVLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA+V DTFR GA++Q K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVVQTDTFRPGAYEQAKEMCERAEVEFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ ++ +PD + V+D++IGQ A DQA+ F +V
Sbjct: 175 TADADVHIVDTAGRHALEEVLIDELERIESVADPDRNLLVLDAAIGQGAKDQAERFHDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVDQTDSSIAFLGTGEEVKDVERFEASGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELL--QKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
+++ + Q E + L +G FTL+ M Q + +MGP+ QV M+PG
Sbjct: 295 KQLSERVERAMAETQAEEDWDPEDLMQGEFTLKDMRNQMNAMNRMGPLDQVLDMIPGLGG 354
Query: 359 ---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREV 415
+ +P+ +Q +++ + +MDSMT+ EL+ +P+ + S+I RIARGSG+ V
Sbjct: 355 GIKDQLPEDAMDMTQERLRDFEVIMDSMTDAELE--HPRAIGQSQIERIARGSGKDEETV 412
Query: 416 MEMLEEYKRLAKIWSKMKGL 435
E+LE++K ++++ + +G+
Sbjct: 413 RELLEQHKMMSQMMKQFQGM 432
>gi|448456638|ref|ZP_21595345.1| signal recognition particle protein Srp54 [Halorubrum lipolyticum
DSM 21995]
gi|445811783|gb|EMA61785.1| signal recognition particle protein Srp54 [Halorubrum lipolyticum
DSM 21995]
Length = 464
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 261/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLRIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDNDDPVAIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ +PD + V+D++IGQ A +QA+ F+ S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIESVVDPDRSLLVLDAAIGQGAKEQARQFEASI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ + Q + + + +G FTL+ M +Q + +MGP+ QV M+PG
Sbjct: 295 KQLSERVERAMQETQEEDEDWDPEDMLQGEFTLKDMKKQMDAMNRMGPLDQVMDMIPGLG 354
Query: 358 SELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
+M P +Q +++R+ +MDSMT EEL +NP+++ SR RIARGSG
Sbjct: 355 GGMMDQLPDDAMDVTQDRMRRFERIMDSMTEEEL--TNPRVVGQSRTERIARGSGTDEET 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V ++LE++ + + S+ +G+
Sbjct: 413 VRQLLEQHSMMEQTISQFQGM 433
>gi|352681831|ref|YP_004892355.1| signal recognition particle subunit SRP54 [Thermoproteus tenax Kra
1]
gi|350274630|emb|CCC81275.1| signal recognition particle, subunit SRP54 [Thermoproteus tenax Kra
1]
Length = 439
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/423 (39%), Positives = 258/423 (60%), Gaps = 16/423 (3%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
S+ I ++ +DE+VL E E+ R+LL+ADV L++ + + + G
Sbjct: 9 SKLIDKIRGIDYLDEQVLTEITRELQRSLLKADVPLDLIKSFTDRAVQRMKEERPPPGIP 68
Query: 71 KRRIIQQAIFNELCKMLDPGKPSFT---PKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
+ + I++EL ++L G+ PK+ P VIM +G++GSGKTTT K A ++ K
Sbjct: 69 LKDYVIYIIYDELVRLLG-GEAEVNVGIPKR--PYVIMLLGVEGSGKTTTAAKIALFYLK 125
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G KP L+ DT R A+DQL+Q A K +PFYG D V IA G+ + K N DL+
Sbjct: 126 RGVKPGLIETDTIRPAAYDQLRQLAEKIGVPFYGEREGRDAVEIAKRGLASLK--NVDLV 183
Query: 188 IVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIV 247
IVDT+GRH+ E AL EE+R + EA PD V+ V+D+++G+ A QA+AF + V V +V +
Sbjct: 184 IVDTAGRHRNEQALLEEVRAIYEAVKPDEVMLVVDATVGRQAAAQAEAFMKYVPVHSVAI 243
Query: 248 TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKI 307
TKMD A+GGGAL+AVA T + V FIG GE +DE E+F+ + FV+R+LGMGD ++++
Sbjct: 244 TKMDSTARGGGALAAVAKTGARVKFIGVGEGVDELELFNARKFVARVLGMGDLESLVERV 303
Query: 308 HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREK 367
V+ ++ ++L+ L G L +Q +LK+GP+ ++ +LPG + + + + +
Sbjct: 304 KAVL---EEEKILEDLESGRMDLLSFKKQLDALLKLGPLSKIMELLPGTLASKISEEQIE 360
Query: 368 ESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY---KR 424
SQ +K++ ++ SMT EEL +P ++N SRI RIA G+G ++V +ML Y KR
Sbjct: 361 LSQKNLKKWRAILSSMTKEEL--KDPSILNASRIRRIAIGAGVTPKDVKDMLRAYEAMKR 418
Query: 425 LAK 427
++K
Sbjct: 419 MSK 421
>gi|448354426|ref|ZP_21543183.1| signal recognition particle protein Srp54 [Natrialba hulunbeirensis
JCM 10989]
gi|445637943|gb|ELY91090.1| signal recognition particle protein Srp54 [Natrialba hulunbeirensis
JCM 10989]
Length = 493
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 258/444 (58%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK
Sbjct: 32 MVLDDLGSSLRGSLDKLRGKSRISEEDVEEIVKEIQRSLLSADVDVSLVMELSDNIKARA 91
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 92 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSSAK 147
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A +A++ FYG+ DPV IA +G+E
Sbjct: 148 MAWWFSTKGLRPAIIQTDTFRPGAYDQAKEMAGRAEVDFYGNPDNDDPVDIARKGLEATS 207
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ ++ PD + V+D++IGQ A +QAQ F +S+
Sbjct: 208 E--ADVHIVDTAGRHALEDDLIDEIEEIEGVAQPDTSLLVLDAAIGQGAKEQAQQFDESI 265
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 266 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDSFISRLLGMGDL 325
Query: 301 SGFMDKIHEVVPM------DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ + D PE + +G FTL M +Q + + MGP+ QV M+P
Sbjct: 326 GQLAERVERAMEQTQIEDDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIP 382
Query: 355 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
GF + +P +Q ++ + +MDSMT+ E PK + S+I RIARGSG
Sbjct: 383 GFGGGIKDQLPDDAMDVTQERMHSFSVIMDSMTDAE--KEYPKAIGASQIERIARGSGTS 440
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
+V E+L++YK + K + +G+
Sbjct: 441 EEQVRELLQQYKMMEKTIKQFQGM 464
>gi|448531082|ref|ZP_21620916.1| signal recognition particle protein Srp54 [Halorubrum hochstenium
ATCC 700873]
gi|445707522|gb|ELZ59376.1| signal recognition particle protein Srp54 [Halorubrum hochstenium
ATCC 700873]
Length = 464
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 259/441 (58%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ T + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKTRLSESDVEEMVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTARDHVLRIVYEEMVDLV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ +PD + V+D++IGQ A +QA+ F+ S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEGVVDPDRSLLVLDAAIGQGAKEQARQFEASI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ + Q + + +G FTL+ M Q + KMGP+ QV M+PG
Sbjct: 295 KQLSERVERAMQETQEEDDDWDPEDMLKGEFTLKDMKRQMDAMNKMGPLDQVMDMIPGLG 354
Query: 358 SELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
+M P +Q +++R+ +MDSMT EEL+ NP+++ SR+ RIARGSG
Sbjct: 355 GGMMDELPDDAMDVTQDRMRRFERIMDSMTEEELE--NPRVVGQSRVERIARGSGTDEET 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V ++LE++ + + + +G+
Sbjct: 413 VQQLLEQHSMMEETIGQFQGM 433
>gi|448488716|ref|ZP_21607390.1| signal recognition particle protein Srp54 [Halorubrum
californiensis DSM 19288]
gi|445695664|gb|ELZ47765.1| signal recognition particle protein Srp54 [Halorubrum
californiensis DSM 19288]
Length = 463
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 260/441 (58%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGNPDNDDPVDIARTGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ +PD + V+D++IGQ A DQA+ F++S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEGVVDPDRSLLVLDAAIGQGAKDQARQFEKSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ + Q + + + +G FTL+ M Q + KMGP+ QV M+PG
Sbjct: 295 KQLSERVERAMQETQEEDEDWDPEDMLQGEFTLKDMKRQMDAMNKMGPLDQVMDMIPGLG 354
Query: 358 SELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
+M P +Q +++R+ +MDSMT EEL+ NP+++ SR RIARGSG
Sbjct: 355 GGMMDELPDDAMDVTQDRMRRFERIMDSMTEEELE--NPRVVGQSRTRRIARGSGTDEET 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V ++LE++ + + + +G+
Sbjct: 413 VQQLLEQHSMMEETIGQFQGM 433
>gi|257387282|ref|YP_003177055.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Halomicrobium mukohataei DSM 12286]
gi|257169589|gb|ACV47348.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Halomicrobium mukohataei DSM 12286]
Length = 468
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 263/444 (59%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E+ + + + EI R+LLQADV LV+++ IK
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRISEEDIEDIVKEIQRSLLQADVDVGLVQDLSDGIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LDEEPPAGTTPRDWVLRIVYEELVDLV--GESTEIPLENQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DT R GA+DQ KQ A A++ FYG +DPV IA EG+
Sbjct: 117 MAWWFSKKGLRPAVIQTDTDRPGAYDQSKQMADNAEVEFYGDEDSNDPVEIAREGLAA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GR L +++ ++ PD + V+D+++GQ+A DQAQ F+ ++
Sbjct: 175 TEDADVRIVDTAGRDGLNEELIDQIERIGAEVQPDRNLLVIDAAMGQSAKDQAQEFEDAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVAITKLDGTAKGGGALAAVDQTDSTIAFLGTGETVKDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPM------DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
+++ + D +PE + EG+FTL+ M +Q + + MGP+ QV M+P
Sbjct: 295 KQLTERVERAMEETGEEEGDWEPE---DMMEGSFTLKDMRKQMEAMNNMGPLDQVMDMIP 351
Query: 355 GFSSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
G LM P +Q +++ + +MDSMT EEL+ NP+++ SR RIARGSG+
Sbjct: 352 GLGGGLMDQLPDDAMDVTQERMRDFEVIMDSMTEEELE--NPRVVGQSRTERIARGSGKP 409
Query: 412 VREVMEMLEEYKRLAKIWSKMKGL 435
+ E+L+++K++ ++ ++ +G+
Sbjct: 410 EERIRELLQQHKQMDQMLNQFQGM 433
>gi|448467845|ref|ZP_21599645.1| signal recognition particle protein Srp54 [Halorubrum kocurii JCM
14978]
gi|445811570|gb|EMA61574.1| signal recognition particle protein Srp54 [Halorubrum kocurii JCM
14978]
Length = 464
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 264/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LDEEPPGGTTAKDHVLKIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGDPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ A +PD + V+D++IGQ A +QA+ F++S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEGAVDPDRSLLVLDAAIGQGAKEQARQFEESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ + Q + + + +G FTL+ M +Q + +MGP+ QV M+PG
Sbjct: 295 KQLSERVERAMQETQEEDEDWDPEDMLKGEFTLKDMKKQMDAMNRMGPLDQVMDMIPGLG 354
Query: 358 SELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
+M P +Q +++++ +MDSMT+EEL +NP+++ SR RIARGSG
Sbjct: 355 GGMMDQLPDDAMDVTQDRMRKFERIMDSMTDEEL--TNPRVVGQSRTERIARGSGTDEET 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V ++LE++ + + S+ +G+
Sbjct: 413 VQQLLEQHSMMEQTISQFQGM 433
>gi|448503443|ref|ZP_21613074.1| signal recognition particle protein Srp54 [Halorubrum coriense DSM
10284]
gi|445692311|gb|ELZ44489.1| signal recognition particle protein Srp54 [Halorubrum coriense DSM
10284]
Length = 463
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 261/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVELV--GDSTRLPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA+V DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVVQTDTFRPGAYDQAKQMCERAEVDFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L E+ ++ +PD + V+D++IGQ A +QA+ F++S+
Sbjct: 175 TADADVHIVDTAGRHALEDDLIAEIEEIEGVVDPDRSLLVLDAAIGQGAKEQARQFEESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ + Q + + + +G+FTL M Q + KMGP+ QV M+PG
Sbjct: 295 KQLSERVERAMQETQEEDEDWDPEDMLQGDFTLNDMKRQMDAMNKMGPLDQVMDMIPGLG 354
Query: 358 SELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
+M P +Q +++R+ +MDSMT EEL+ NP+++ SR RIARGSG
Sbjct: 355 GGMMDELPDDAMDVTQDRMRRFERIMDSMTEEELE--NPRVVGQSRTERIARGSGTDEET 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V ++LE++ + + S+ +G+
Sbjct: 413 VQQLLEQHSMMEQTISQFQGM 433
>gi|126465672|ref|YP_001040781.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Staphylothermus marinus F1]
gi|171769996|sp|A3DML3.1|SRP54_STAMF RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|126014495|gb|ABN69873.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Staphylothermus marinus F1]
Length = 441
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 162/409 (39%), Positives = 259/409 (63%), Gaps = 3/409 (0%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
E+ + E + ++ + L++ADV KLV E+ I++ ++ G +R ++ EL
Sbjct: 21 ERAVKEFIRDLQKELIKADVNVKLVLELTKKIRERALKEEPPPGITRREWFVNIVYEELS 80
Query: 85 KMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGA 144
K K K KP V++ VGLQGSGKTTT K AYY++ +G++ LV ADT+R A
Sbjct: 81 KFFGGDKKPDIKPKKKPWVMLLVGLQGSGKTTTAAKLAYYYKLEGYRVGLVAADTYRPAA 140
Query: 145 FDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEE 204
+DQLKQ + +P YG D V IA GVE F D++IVDT+GRH +E L E
Sbjct: 141 YDQLKQLGEQIGVPVYGEPDNKDAVEIARRGVEYFVSRGFDIVIVDTAGRHHREEDLLRE 200
Query: 205 MRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVA 264
MR+++E PD V+ V+D++IGQ A D A+ F ++ +G++IVTK+DG AKGGGALSAVA
Sbjct: 201 MREIAENIKPDEVVLVIDAAIGQQAHDLAKKFHEATPIGSIIVTKLDGTAKGGGALSAVA 260
Query: 265 ATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLS 324
T + + FIGTGE +DE EVF FV+R+LG+GD G ++K+ + + ++ + LS
Sbjct: 261 VTGATIKFIGTGEKIDELEVFRPPRFVARILGIGDLEGLIEKVRRIKVEFTEKDVEEFLS 320
Query: 325 EGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMT 384
G +R++Y+Q ++ KMGP+ ++ M+PG S ++ + +++ KIK+++ +++SMT
Sbjct: 321 -GRLNMRLVYKQLVSLRKMGPLRKILQMIPGLSLKIPLEIEAGKAEEKIKKWLAIINSMT 379
Query: 385 NEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMK 433
EELD P++++ RI RIA G+G + +V E+L++Y+ + K+ +++
Sbjct: 380 YEELD--KPEIIDRRRIRRIAYGAGVKPEDVRELLKQYEMMKKLSKQLR 426
>gi|448668329|ref|ZP_21686460.1| signal recognition particle protein Srp54 [Haloarcula amylolytica
JCM 13557]
gi|445768411|gb|EMA19496.1| signal recognition particle protein Srp54 [Haloarcula amylolytica
JCM 13557]
Length = 469
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 161/442 (36%), Positives = 265/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ ++I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIADIVKEIQRSLLQADVDVGLVQDLSSSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LEEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN D+ IVDT+GR L E++ ++ + PD + V+D+++GQ+A QA F++++
Sbjct: 175 TENADVRIVDTAGRDGLNEELIEQIERIEQEVQPDRDLLVLDAAMGQSAKSQAADFEEAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
+++ E D++ + + EG FTL+ M +Q Q + MGP+ QV M+PG
Sbjct: 295 KQLTERVERAMEETQEGDEEDWDPEDMLEGQFTLKDMRKQMQTMNNMGPLDQVMDMIPGL 354
Query: 357 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 413
LM P +Q +++ + +MDSMT EEL+ NP+++ SR RI RGSG+
Sbjct: 355 GGGLMDQLPDDAMDVTQERMRDFDVIMDSMTEEELE--NPRVVGQSRTRRICRGSGKPEE 412
Query: 414 EVMEMLEEYKRLAKIWSKMKGL 435
V E+L+++K++ ++ + +G+
Sbjct: 413 RVRELLQQHKQMEQMLKQFQGM 434
>gi|268323505|emb|CBH37093.1| signal recognition 54 kDa protein [uncultured archaeon]
Length = 443
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 176/432 (40%), Positives = 266/432 (61%), Gaps = 19/432 (4%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +L S+ +I++++ A ID++ ++E + +I RALLQADV+ LV+E+ +I++
Sbjct: 1 MLGKLSSSLKESIRKIAKAKRIDKRTVDELVRDIQRALLQADVKISLVKELSDHIRERSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ + N R + + ++ EL ++ GK P K P IM VGL G+GKT++C K
Sbjct: 61 KEKMLL--NPREHVIKVVYEELINII--GKGVEVPLK--PQKIMMVGLHGAGKTSSCAKL 114
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY-GSYTESDPVRIAVEGVETFK 180
A Y QKKG KPA++CAD +R GA DQL+Q K +PFY G + + +RI GV F
Sbjct: 115 ARYFQKKGLKPAVICADVYRPGASDQLRQLCDKIGVPFYDGQPEDRNVLRIVTSGVNEFD 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+ I+DT+GRH E + +E+ + +AT P+ V+D+SIGQ A QA+AF ++
Sbjct: 175 K--YDIKIIDTAGRHALEPEMIDEIMDIEKATKPEQRFIVLDASIGQQASVQAKAFDDAI 232
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ +I+TKMDG AKGGGALSAVA T S V FIGTGE +D+FE F+ F+SRLLGMGD
Sbjct: 233 GITGIIITKMDGTAKGGGALSAVAETDSGVAFIGTGETVDDFEKFESDGFISRLLGMGDI 292
Query: 301 SGFMDKIHEVV-PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFS 357
+ E + P D ++L+ G FTL+ +Y Q + + KMGP ++ MLP G
Sbjct: 293 KSLIAMAEESLNPEDVDVDILK----GKFTLKDLYMQLEALKKMGPFKKIMQMLPLGGLG 348
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
++ + ++ K+K + MMDSMT +EL S PK+++ SR+ RIA GSG EV E
Sbjct: 349 VDI-NDSMSQITEDKLKCFKVMMDSMTEDEL--SEPKIISGSRLRRIAHGSGTSTAEVNE 405
Query: 418 MLEEYKRLAKIW 429
+++ ++ + K+
Sbjct: 406 LIKYHRMMQKMM 417
>gi|448320595|ref|ZP_21510081.1| signal recognition particle protein Srp54 [Natronococcus
amylolyticus DSM 10524]
gi|445605497|gb|ELY59419.1| signal recognition particle protein Srp54 [Natronococcus
amylolyticus DSM 10524]
Length = 466
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 165/447 (36%), Positives = 260/447 (58%), Gaps = 15/447 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTDLPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMCERAEVDFYGNPDNDDPVEIARNGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ E +PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TGEADVHIVDTAGRHALEDDLIDEIEQIEETVDPDKSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
+++ + D + + + G FTL M +Q + + MGP+ QV M+PGF
Sbjct: 295 GQLAERVERAMQQTDIEDDEEWDPEDMLTGQFTLNDMQKQMEAMNNMGPLDQVMDMIPGF 354
Query: 357 SS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 413
+ +P +Q +++ + +MDSMT E + PK + +I RIARGSG
Sbjct: 355 GGGIKDQLPDDAMDVTQERMRAFSVIMDSMT--ETEKEYPKAIGADQIERIARGSGTSEE 412
Query: 414 EVMEMLEEYKRLAKIWSKMKGLKIPKK 440
+V E+L++YK + + + +G+ K+
Sbjct: 413 QVRELLQQYKMMERTIKQFQGMGSDKE 439
>gi|257052337|ref|YP_003130170.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Halorhabdus utahensis DSM 12940]
gi|256691100|gb|ACV11437.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Halorhabdus utahensis DSM 12940]
Length = 469
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 263/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ A+ + + I E+ + + EI R+LLQADV LV ++ +I+
Sbjct: 1 MVLDDLGSSLRGALDGLRGKSRISEEDVQAVVKEIQRSLLQADVDVDLVMDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + R + + ++ EL ++ G+ + P + P I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTSARDWVLRIVYEELVDLV--GESTELPLE--PQTIVLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DT+R GA++Q ++ A +A++ FYG E D V+IA +G+E
Sbjct: 117 IAWWFSKKGLRPAVIQTDTWRPGAYEQAEEMAERAEVDFYGDPDEDDAVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
++ D+ IVDT+GRH E L +E+ + +PD + V+D++IGQ A +QA F+ +V
Sbjct: 175 TDDADVQIVDTAGRHALEDGLIDELEDIESVADPDHNLLVLDAAIGQEAKEQASRFEDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALVAVNETDSTIAFLGTGETVKDVERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPE---LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ + Q E + + +G FTL+ M +Q + + KMGP+ QV M+PG
Sbjct: 295 QQLTERVERAMEETQAEEGDWGPEDMLDGEFTLKDMRKQMEAMNKMGPLDQVMDMIPGLG 354
Query: 358 SELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
+M P +Q +++ + +MDSMT EL+ NP+ + SR RIARGSG+
Sbjct: 355 GGMMDQLPDDAMDVTQERMRDFEVIMDSMTEAELE--NPRQIGRSRTERIARGSGKPKDR 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
+ E+LE++K + + ++ +G+
Sbjct: 413 IRELLEQHKMMDRTLNQFQGM 433
>gi|448731425|ref|ZP_21713725.1| signal recognition particle protein Srp54 [Halococcus
saccharolyticus DSM 5350]
gi|445792178|gb|EMA42790.1| signal recognition particle protein Srp54 [Halococcus
saccharolyticus DSM 5350]
Length = 467
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 263/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T +DE+ + E + EI R+L+QADV+ LV E+ +I++
Sbjct: 1 MVLDDLGSSLRGTLDRLQGKTRLDEEDVEEVVREIQRSLIQADVEIDLVMELSDSIEQRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ ++ G+ + P + P I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDFVLRIVYEEMVDLV--GESTDLPLE--PQTILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ A +A++ FYG DPV+IA +G+
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMAERAEVTFYGDPDADDPVQIARDGLAA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ IVDT+GRH E L +E++++ PD + VMD+++GQ A DQAQ F++++
Sbjct: 175 TEEADIHIVDTAGRHALEEGLIDEIQEIDAVVEPDRSLLVMDAALGQGAKDQAQRFEEAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVAITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELL---QKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ + E + + EG FTL+ M Q + KMGP+ QV M+PG
Sbjct: 295 KQLAERVERAMADTDTDEEDWDPEDILEGQFTLKDMRHQMDAMNKMGPLDQVLDMIPGLG 354
Query: 358 S---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
+ +P +Q +++ + +MDSMT +EL+ NP+ + S+ RIARGSG+
Sbjct: 355 GGIKDQLPDDAMDVTQDRMRSFDIVMDSMTEDELE--NPRSIGASQTRRIARGSGQPEER 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V E+LE+++ + + + +G+
Sbjct: 413 VQELLEQHRMMERTLKQFQGM 433
>gi|448445207|ref|ZP_21590262.1| signal recognition particle protein Srp54 [Halorubrum saccharovorum
DSM 1137]
gi|445685513|gb|ELZ37867.1| signal recognition particle protein Srp54 [Halorubrum saccharovorum
DSM 1137]
Length = 464
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 264/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVDLV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMCERAEVDFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ +A +PD + V+D++IGQ A DQA+ F++S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEQAVDPDRSLLVLDAAIGQGAKDQARQFEESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--- 354
+++ + Q + + + +G FTL+ M +Q + +MGP+ QV M+P
Sbjct: 295 KQLSERVERAMEEAQEEDEDWDPEDMLQGEFTLKDMKKQMDAMNRMGPLDQVMDMIPGMG 354
Query: 355 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
G + +P +Q +++R+ +MDSMT EEL+ NP+++ SR RIARGSG
Sbjct: 355 GGMMDQLPDDAMDVTQDRMRRFERIMDSMTEEELE--NPRVVGQSRTERIARGSGTDEET 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V ++LE++ + + S+ +G+
Sbjct: 413 VQQLLEQHSMMEQTISQFQGM 433
>gi|297526052|ref|YP_003668076.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Staphylothermus hellenicus DSM 12710]
gi|297254968|gb|ADI31177.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Staphylothermus hellenicus DSM 12710]
Length = 444
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/414 (39%), Positives = 259/414 (62%), Gaps = 6/414 (1%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
E+ + E + ++ + L++ADV +LV E+ I++ ++ G +R ++ EL
Sbjct: 24 ERAVKEFIRDLQKELIKADVNVRLVLELTKKIRERALEEEPPPGITRREWFINIVYEELS 83
Query: 85 KMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGA 144
K + K KP V++ VGLQGSGKTTT K AYY++ +G++ LV ADT+R A
Sbjct: 84 KFFGGDRKPDIKPKKKPWVMLLVGLQGSGKTTTAAKLAYYYKLEGYRVGLVTADTYRPAA 143
Query: 145 FDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEE 204
+DQLKQ + +P YG D V IA GVE F D++IVDT+GRH +E L +E
Sbjct: 144 YDQLKQLGEQIGVPVYGEPNNKDAVEIARRGVEYFVSRGFDIVIVDTAGRHHREEDLLKE 203
Query: 205 MRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVA 264
MR+++E PD V+ V+D++IGQ A + A+ F + +G++IVTK+DG AKGGGALSAVA
Sbjct: 204 MREIAENIKPDEVVLVIDAAIGQQAHNLAKKFHTATPIGSIIVTKLDGTAKGGGALSAVA 263
Query: 265 ATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLS 324
T + + FIGTGE +DE EVF FV+R+LG+GD G ++K+ + + ++ + LS
Sbjct: 264 VTGATIKFIGTGEKIDELEVFRPPRFVARILGIGDLEGLVEKVRRIKVEFTEKDVEEFLS 323
Query: 325 EGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMT 384
G +R++Y+Q ++ KMGP+ ++ M+PG S ++ + +++ KIK+++ +++SMT
Sbjct: 324 -GRLNMRLVYKQLVSLRKMGPLRKILQMIPGLSLKIPLEIEAGKAEEKIKKWLAIINSMT 382
Query: 385 NEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY---KRLAKIWSKMKGL 435
EELD P++++ R RIA G+G + +V E+L++Y K+L+K K K L
Sbjct: 383 YEELD--KPEIIDRRRTRRIAYGAGVKTEDVRELLKQYEMMKKLSKQLRKRKDL 434
>gi|448472202|ref|ZP_21601078.1| signal recognition particle protein Srp54 [Halorubrum aidingense
JCM 13560]
gi|445819992|gb|EMA69822.1| signal recognition particle protein Srp54 [Halorubrum aidingense
JCM 13560]
Length = 464
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/441 (36%), Positives = 262/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVALV--GDSTDLPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV IA +G++
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGDPDNDDPVDIARKGLDATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L E+ ++ A +PD + V+D++IGQ A +QA+ F+QS+
Sbjct: 177 --DADVHIVDTAGRHALEDDLIAEIEEIERAVDPDRSLLVLDAAIGQGAKEQARQFEQSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ + Q + + + +G FTL+ M +Q + +MGP+ QV M+PG
Sbjct: 295 KQLSERVERAMQEAQDEDEDWDPEDMLKGEFTLKDMKKQMDAMNRMGPLDQVMDMIPGLG 354
Query: 358 SELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
+M P +Q +++++ +MDSMT+EEL +NP+++ SR RIARGSG
Sbjct: 355 GGMMDQLPDDAMDVTQDRMRKFERIMDSMTDEEL--TNPRVVGQSRTERIARGSGTDEET 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V ++LE++ + + S+ +G+
Sbjct: 413 VRQLLEQHSMMEQTISQFQGM 433
>gi|448689701|ref|ZP_21695285.1| signal recognition particle protein Srp54 [Haloarcula japonica DSM
6131]
gi|445777972|gb|EMA28932.1| signal recognition particle protein Srp54 [Haloarcula japonica DSM
6131]
Length = 470
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/442 (36%), Positives = 263/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ +I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIEDIVKEIQRSLLQADVDVGLVQDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LEEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN D+ IVDT+GR L E++ ++ + PD + V+D+++GQ+A QA F+ ++
Sbjct: 175 TENADVRIVDTAGRDGLNEELIEQIERIEQEVQPDRDLLVLDAAMGQSAKSQAADFEAAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
+++ E D++ + + EG FTL+ M +Q Q + MGP+ QV M+PG
Sbjct: 295 KQLTERVERAMEETQEGDEEDWDPEDMLEGQFTLKDMRKQMQTMNNMGPLDQVMDMIPGL 354
Query: 357 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 413
LM P +Q +++ + +MDSMT EEL+ NP+++ SR RI RGSG+
Sbjct: 355 GGGLMDQLPDDAMDVTQERMRDFDVIMDSMTEEELE--NPRVVGQSRTRRICRGSGKPEE 412
Query: 414 EVMEMLEEYKRLAKIWSKMKGL 435
V E+L+++K++ ++ + +G+
Sbjct: 413 RVRELLQQHKQMEQMLKQFQGM 434
>gi|448725559|ref|ZP_21708014.1| signal recognition particle protein Srp54 [Halococcus morrhuae DSM
1307]
gi|445798406|gb|EMA48821.1| signal recognition particle protein Srp54 [Halococcus morrhuae DSM
1307]
Length = 466
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/440 (36%), Positives = 265/440 (60%), Gaps = 13/440 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T +DE+ + E + EI R+L+QADV+ LV E+ I++
Sbjct: 1 MVLDDLGSSLRGTLDRLQGKTRLDEEDVEEVVREIQRSLIQADVEIDLVMELSDEIERRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ ++ G + P + + I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDFVLRIVYEEMVDLV--GDSTELPLESQ--TILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ ++ A++A++ FYG DPV IA EG+
Sbjct: 117 MAWWFSKKGLRPAIIQTDTFRPGAYDQAEEMASRAEVSFYGDPDNDDPVEIAREGLAA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ IVDT+GRH E L +E+ + + +PD + VMD++IGQ A DQAQ F++++
Sbjct: 175 TEEADVHIVDTAGRHALEEGLIDEIETIDDTVDPDRRLLVMDAAIGQGAKDQAQRFEEAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GVDGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
+++ + +++ + + G FTL+ M Q + KMGP+ QV M+PG
Sbjct: 295 KQLAERVERAMETGDEEEDWDPEDIMSGQFTLKDMRHQMNAMNKMGPLDQVLDMIPGLGG 354
Query: 359 EL---MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREV 415
L +P +Q +++ + +MDSMT++EL+ NP+ + +++ R+ARGSG+ V
Sbjct: 355 GLKDQLPDDAMDVTQDRMRSFEVVMDSMTDKELE--NPRSVGANQVRRVARGSGQPEERV 412
Query: 416 MEMLEEYKRLAKIWSKMKGL 435
E+LE+++ + + + +G+
Sbjct: 413 QELLEQHRMMERTLKQFQGM 432
>gi|55379689|ref|YP_137539.1| signal recognition 54 kDa protein [Haloarcula marismortui ATCC
43049]
gi|448641490|ref|ZP_21678100.1| signal recognition particle protein Srp54 [Haloarcula sinaiiensis
ATCC 33800]
gi|448654753|ref|ZP_21681679.1| signal recognition particle protein Srp54 [Haloarcula californiae
ATCC 33799]
gi|74552458|sp|Q5UY20.1|SRP54_HALMA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|55232414|gb|AAV47833.1| signal recognition 54 kDa protein [Haloarcula marismortui ATCC
43049]
gi|445760904|gb|EMA12160.1| signal recognition particle protein Srp54 [Haloarcula sinaiiensis
ATCC 33800]
gi|445766601|gb|EMA17728.1| signal recognition particle protein Srp54 [Haloarcula californiae
ATCC 33799]
Length = 469
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/442 (36%), Positives = 263/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ +I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIEDIVKEIQRSLLQADVDVGLVQDLSNSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LDEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN D+ IVDT+GR L E++ ++ + PD + V+D+++GQ+A QA F+ ++
Sbjct: 175 TENADVRIVDTAGRDGLNEELIEQIERIEQEVQPDRDLLVLDAAMGQSAKSQAADFEAAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
+++ E D++ + + EG FTL+ M +Q Q + MGP+ QV M+PG
Sbjct: 295 KQLTERVERAMEETQEGDEEDWDPEDMLEGQFTLKDMRKQMQTMNNMGPLDQVMDMIPGL 354
Query: 357 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 413
LM P +Q +++ + +MDSMT EEL+ NP+++ SR RI RGSG+
Sbjct: 355 GGGLMDQLPDDAMDVTQERMQDFDVIMDSMTEEELE--NPRVVGQSRTKRICRGSGKPEE 412
Query: 414 EVMEMLEEYKRLAKIWSKMKGL 435
V E+L+++K++ ++ + +G+
Sbjct: 413 RVRELLQQHKQMEQMLKQFQGM 434
>gi|284163555|ref|YP_003401834.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Haloterrigena turkmenica DSM 5511]
gi|284013210|gb|ADB59161.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Haloterrigena turkmenica DSM 5511]
Length = 463
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/441 (37%), Positives = 263/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRISEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q K+ +A++ FYG+ DPV IA +G+E K
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAKEMTQRAEVDFYGNPDNDDPVEIARKGLE--K 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ ++ + +PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDELIDEIEEIEDVADPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKIDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ E M+++ + + +G+FTL M +Q + + MGP+ QV M+PGF
Sbjct: 295 GQLAERVERAMEQTEMEEEDWDPEDMLQGSFTLHDMQKQMEAMNNMGPLDQVMDMIPGFG 354
Query: 358 S---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
+ +P +Q +++ + +MDSMT E + PK + S+I RIARGSG E
Sbjct: 355 GGIKDQLPDDAMDVTQDRMRTFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGTTEEE 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V E+L++YK + K + +G+
Sbjct: 413 VRELLQQYKMMEKTIKQFQGM 433
>gi|448679313|ref|ZP_21690150.1| signal recognition particle protein Srp54 [Haloarcula argentinensis
DSM 12282]
gi|445771411|gb|EMA22468.1| signal recognition particle protein Srp54 [Haloarcula argentinensis
DSM 12282]
Length = 469
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/442 (36%), Positives = 264/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ +I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIEDIVKEIQRSLLQADVDVGLVQDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LDEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GR L E++ ++ + PD + V+D+++GQ+A QA F++++
Sbjct: 175 TESADVRIVDTAGRDGLNEELIEQIERIEQEVQPDRDLLVLDAAMGQSAKSQAADFEEAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
+++ E D++ + + EG FTL+ M +Q Q + MGP+ QV M+PG
Sbjct: 295 KQLTERVERAMEETQEGDEEDWDPEDMMEGKFTLKDMRKQMQTMNNMGPLDQVMDMIPGL 354
Query: 357 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 413
LM P +Q +++ + +MDSMT EEL+ NP+++ SR RI RGSG+
Sbjct: 355 GGGLMDQLPDDAMDVTQERMRDFDVIMDSMTEEELE--NPRVVGQSRTKRICRGSGKPEE 412
Query: 414 EVMEMLEEYKRLAKIWSKMKGL 435
V E+L+++K++ ++ + +G+
Sbjct: 413 RVRELLQQHKQMEQMLKQFQGM 434
>gi|448315945|ref|ZP_21505583.1| signal recognition particle protein Srp54 [Natronococcus jeotgali
DSM 18795]
gi|445610291|gb|ELY64065.1| signal recognition particle protein Srp54 [Natronococcus jeotgali
DSM 18795]
Length = 462
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/447 (36%), Positives = 259/447 (57%), Gaps = 15/447 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ +I++
Sbjct: 1 MVLDDLGTSLRGTLDKLRGKSRVSEEDIGEIVKEIQRSLLSADVDVSLVMELSDSIERRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTDLPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ +A++ FYG DPV IA EG+E
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMTERAEVDFYGDPDADDPVEIAREGLEATS 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQA+ F +S+
Sbjct: 177 E--ADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQARQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
+++ + D + + + G FTL M +Q + + MGP+ QV M+PGF
Sbjct: 295 GQLAERVERAMQQTDIEDDEEWDPEDMLTGQFTLNDMQKQMEAMNNMGPLDQVMDMIPGF 354
Query: 357 SS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 413
+ +P +Q +++ + +MDSMT+ E PK + S+I RIARGSG
Sbjct: 355 GGGIKDQLPDDAMDVTQERMRTFSVIMDSMTDTE--KEYPKAIGASQIERIARGSGTSEE 412
Query: 414 EVMEMLEEYKRLAKIWSKMKGLKIPKK 440
+V E+L++YK + + + +G+ K+
Sbjct: 413 QVRELLQQYKMMERTIKQFQGMGSDKE 439
>gi|344210686|ref|YP_004795006.1| signal recognition 54 kDa protein [Haloarcula hispanica ATCC 33960]
gi|343782041|gb|AEM56018.1| signal recognition 54 kDa protein [Haloarcula hispanica ATCC 33960]
Length = 470
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 160/442 (36%), Positives = 262/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ +I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIEDIVKEIQRSLLQADVDVGLVQDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LEEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
N D+ IVDT+GR L E++ ++ + PD + V+D+++GQ+A QA F+ ++
Sbjct: 177 --NADVRIVDTAGRDGLNEELIEQIERIEQEVQPDRDLLVLDAAMGQSAKSQAADFEAAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
+++ E D++ + + EG FTL+ M +Q Q + MGP+ QV M+PG
Sbjct: 295 KQLTERVERAMEETQEGDEEDWDPEDMLEGQFTLKDMRKQMQTMNNMGPLDQVMDMIPGL 354
Query: 357 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 413
LM P +Q +++ + +MDSMT EEL+ NP+++ SR RI RGSG+
Sbjct: 355 GGGLMDQLPDDAMDVTQERMRDFDVIMDSMTEEELE--NPRVVGQSRTRRICRGSGKPEE 412
Query: 414 EVMEMLEEYKRLAKIWSKMKGL 435
V E+L+++K++ ++ + +G+
Sbjct: 413 RVRELLQQHKQMEQMLKQFQGM 434
>gi|330834334|ref|YP_004409062.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Metallosphaera cuprina Ar-4]
gi|329566473|gb|AEB94578.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Metallosphaera cuprina Ar-4]
Length = 446
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 159/392 (40%), Positives = 246/392 (62%), Gaps = 17/392 (4%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
+ E + E+ ++L+ +DVQ KLV + IK+ + + + +R + +++EL +
Sbjct: 23 VEEFIKELQKSLISSDVQVKLVLSLTNKIKERLKKETPPSNLERREWFIKVVYDELSALF 82
Query: 88 DPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFD 146
K P PK P VIM VG+QG+GKTTT K AY+++++G+K ALV AD +R A +
Sbjct: 83 GGDKEPEVNPK-SNPWVIMLVGVQGTGKTTTAGKLAYFYKRRGYKVALVGADVYRPAALE 141
Query: 147 QLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAALFEE 204
QL+Q + +P YG SD V I+ GV F E +LII+DT+GRH +E+ L +E
Sbjct: 142 QLRQIGKQINVPVYGEPDSSDAVGISERGVAKFLSERYELIIIDTAGRHGYGEESKLLDE 201
Query: 205 MRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVA 264
M+++ E P+ V+ V+D+S+GQ AFD A+ F ++ +VG++I+TKMDG AKGGGALSAVA
Sbjct: 202 MKEIYEKVKPNEVVLVIDASLGQKAFDLAKKFHEASNVGSIIITKMDGTAKGGGALSAVA 261
Query: 265 ATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLS 324
AT + + FIG GE +DE EVF+ + FV+R+LGMGD ++K+ + ++ +
Sbjct: 262 ATGARIKFIGLGEKIDELEVFNPRRFVARILGMGDLEAIIEKMKATEEYESIQNKMKDVI 321
Query: 325 EG--NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKI-----KRYM 377
G TLR MY+Q + KMGP+ ++ ++PG + ++ G KE Q KI K+++
Sbjct: 322 SGKSKLTLRDMYKQIIAVRKMGPLSKILQLIPG--TNML--GDIKEDQVKIGEEKMKKWI 377
Query: 378 TMMDSMTNEELDSSNPKLMNDSRIMRIARGSG 409
++M+SMT EELD NP +++ R+ RIA GSG
Sbjct: 378 SIMNSMTYEELD--NPSIIDKQRMRRIAFGSG 407
>gi|448388336|ref|ZP_21565191.1| signal recognition particle protein Srp54 [Haloterrigena salina JCM
13891]
gi|445670472|gb|ELZ23072.1| signal recognition particle protein Srp54 [Haloterrigena salina JCM
13891]
Length = 464
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 166/441 (37%), Positives = 262/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRISEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q K+ +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAKEMTQRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ ++ + +PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDELIDEIEEIEDVADPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKIDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ E M++ + + +G+FTL M +Q + + MGP+ QV M+PGF
Sbjct: 295 GQLAERVERAMEQTEMEEDDWDPEDMLQGSFTLHDMQKQMEAMNNMGPLDQVMDMIPGFG 354
Query: 358 S---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
+ +P +Q +++ + +MDSMT E + PK + S+I RIARGSG E
Sbjct: 355 GGIKDQLPDDAMDVTQDRMRTFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGTTEEE 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V E+L++YK + K + +G+
Sbjct: 413 VRELLQQYKMMEKTIKQFQGM 433
>gi|448732200|ref|ZP_21714482.1| signal recognition particle protein Srp54 [Halococcus salifodinae
DSM 8989]
gi|445805112|gb|EMA55339.1| signal recognition particle protein Srp54 [Halococcus salifodinae
DSM 8989]
Length = 464
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 262/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T +DE+ + E + EI R+L+QADV+ LV E+ +I++
Sbjct: 1 MVLDDLGSSLRGTLDRLQGKTRLDEEDVEEVVREIQRSLIQADVEIDLVMELSDSIEQRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ +++ G+ + P + + I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDFVLRIVYEEMVELV--GESTDLPLESQ--TILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ A +A++ FYG DPV IA EG+
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMAERAEVTFYGDPDADDPVEIAREGLAA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ IVDT+GRH E L +E++++ PD + VMD+++GQ A DQAQ F++++
Sbjct: 175 TEEADIHIVDTAGRHALEEGLIDEIQEIDAVVEPDRSLLVMDAALGQGAKDQAQRFEEAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVAITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELL---QKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ + E + + +G FTL+ M Q + KMGP+ QV M+PG
Sbjct: 295 KQLAERVERAMADTDTDEEDWDPEDILDGQFTLKDMRHQMDAMNKMGPLDQVLDMIPGLG 354
Query: 358 SEL---MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
L +P +Q +++ + +MDSMT EL+ NP+ + S+ RIARGSG+
Sbjct: 355 GGLKDQLPDDAMDVTQDRMRSFDIVMDSMTENELE--NPRSVGASQTRRIARGSGQPEER 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V E+LE+++ + + + +G+
Sbjct: 413 VQELLEQHRMMEQTLKQFQGM 433
>gi|448634293|ref|ZP_21674691.1| signal recognition particle protein Srp54 [Haloarcula vallismortis
ATCC 29715]
gi|445749266|gb|EMA00711.1| signal recognition particle protein Srp54 [Haloarcula vallismortis
ATCC 29715]
Length = 469
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/442 (36%), Positives = 261/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ +I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIEDIVKEIQRSLLQADVDVGLVQDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LEEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN D+ IVDT+GR L E++ ++ + PD + V+D+++GQ+A QA F+ ++
Sbjct: 175 TENADVRIVDTAGRDGLNEELIEQIERIEQEVQPDRDLLVLDAAMGQSAKSQAADFEDAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
+++ E D + + + EG FTL+ M +Q Q + MGP+ QV M+PG
Sbjct: 295 KQLTERVERAMEETQEGDDEDWDPEDMLEGQFTLKDMRKQMQTMNNMGPLDQVMDMIPGL 354
Query: 357 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 413
LM P +Q +++ + +MDSMT EL+ NP+++ SR RI RGSG+
Sbjct: 355 GGGLMDQLPDDAMDVTQERMRDFDVIMDSMTEAELE--NPRVVGQSRTERICRGSGKPEE 412
Query: 414 EVMEMLEEYKRLAKIWSKMKGL 435
V E+L+++K++ ++ + +G+
Sbjct: 413 RVRELLQQHKQMEQMLKQFQGM 434
>gi|448738043|ref|ZP_21720074.1| signal recognition particle protein Srp54 [Halococcus thailandensis
JCM 13552]
gi|445802627|gb|EMA52931.1| signal recognition particle protein Srp54 [Halococcus thailandensis
JCM 13552]
Length = 465
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 161/440 (36%), Positives = 263/440 (59%), Gaps = 13/440 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T +DE+ + E + EI R+L+QADV+ LV E+ I++
Sbjct: 1 MVLDDLGSSLRGTLDRLQGKTRLDEEDVEEVVREIQRSLIQADVEIDLVMELSDEIERRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ ++ G + P + + I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDFVLRIVYEEMVDLV--GDSTELPLESQ--TILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ ++ A++A++ FYG DPV IA EG+
Sbjct: 117 MAWWFSKKGLRPAIIQTDTFRPGAYDQAEEMASRAEVSFYGDPDNDDPVEIAREGLAA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ IVDT+GRH E L +E+ + +PD + VMD++IGQ A DQAQ F++++
Sbjct: 175 TEEADVHIVDTAGRHALEEGLIDEIEAIDATVDPDRRLLVMDAAIGQGAKDQAQRFEEAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GVDGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 358
+++ + +++ + + G FTL+ M Q + KMGP+ QV M+PG
Sbjct: 295 KQLAERVERAMETGDEEEDWDPEDIMSGQFTLKDMRHQMNAMNKMGPLDQVLDMIPGLGG 354
Query: 359 ---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREV 415
+ +P +Q +++ + +MDSMT +EL+ NP+ + +++ R+ARGSG+ V
Sbjct: 355 GIKDQLPDDAMDVTQDRMRSFEVVMDSMTEKELE--NPRSVGANQVRRVARGSGQPEERV 412
Query: 416 MEMLEEYKRLAKIWSKMKGL 435
E+LE+++ + + + +G+
Sbjct: 413 QELLEQHRMMERTLKQFQGM 432
>gi|345006190|ref|YP_004809043.1| Signal recognition 54 kDa protein [halophilic archaeon DL31]
gi|344321816|gb|AEN06670.1| Signal recognition 54 kDa protein [halophilic archaeon DL31]
Length = 462
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/441 (37%), Positives = 267/441 (60%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + +DE+ + E + EI R+LLQADV+ LV E+ ++I++
Sbjct: 1 MVLDNLGSSLRGTMDTLRGKSRLDEEDVEEIVKEIQRSLLQADVEVDLVMELSSSIEERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R I + ++ E+ +++ G+ + P + P +M GLQGSGKTTT K
Sbjct: 61 LNEEPPGGTSARDHILKIVYEEMVEVV--GESTEIPLE--PQTLMLSGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR G++ Q KQ A A++ FYG DPV+IA +G+E
Sbjct: 117 IAWWFSKKGLRPAVIQTDTFRPGSYQQAKQMAENAEVEFYGDPDAEDPVQIARDGLEATS 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L EE+ ++ A +PD + V+D++IGQ A QA+ F ++
Sbjct: 177 --DADVHIVDTAGRHALEDDLIEEIEEIERAVDPDRNLLVLDAAIGQGAKAQAREFDDAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GVDGVTITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPE---LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--- 354
+++ + Q+ E + + EGNFTL+ M Q + KMGP+ QV M+P
Sbjct: 295 KQLSERVERAMAETQEGEDDWDPEDMLEGNFTLKDMQRQMDAMNKMGPLDQVMDMIPGMG 354
Query: 355 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
G + +P +Q +++ + +MDSMT+EEL+ +P+ + S++ RIARGSG
Sbjct: 355 GGMMDQLPDDAMDVTQDRMRNFEVIMDSMTDEELE--DPRSIGASQVQRIARGSGTDEET 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V E+L+++K + + ++ +G+
Sbjct: 413 VRELLQQHKMMDRTLNQFQGM 433
>gi|222478931|ref|YP_002565168.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Halorubrum lacusprofundi ATCC 49239]
gi|254772972|sp|B9LT33.1|SRP54_HALLT RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|222451833|gb|ACM56098.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Halorubrum lacusprofundi ATCC 49239]
Length = 464
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/441 (36%), Positives = 261/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDNDDPVAIAREGLEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L E+ ++ A +PD + V+D++IGQ A +QA+ F++S+
Sbjct: 177 --DADVHIVDTAGRHALEDDLIAEIEEIERAVDPDRSLLVLDAAIGQGAKEQARQFEKSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--- 354
+++ + Q + + + +G FTL+ M Q + +MGP+ QV M+P
Sbjct: 295 KQLSERVERAMAEAQEEDEDWDPEDMLQGEFTLKDMKRQMDAMNRMGPLDQVMDMIPGMG 354
Query: 355 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
G + +P +Q +++R+ +MDSMT+EEL+ P+++ SR RIARGSG
Sbjct: 355 GGMMDQLPDDAMDVTQDRMRRFERIMDSMTDEELE--QPRVVGQSRTERIARGSGTDEET 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V ++LE++ + + S+ +G+
Sbjct: 413 VRQLLEQHSMMEQTISQFQGM 433
>gi|305663445|ref|YP_003859733.1| GTP-binding signal recognition particle SRP54 G- domain
[Ignisphaera aggregans DSM 17230]
gi|304378014|gb|ADM27853.1| GTP-binding signal recognition particle SRP54 G- domain
[Ignisphaera aggregans DSM 17230]
Length = 453
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 158/406 (38%), Positives = 254/406 (62%), Gaps = 7/406 (1%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPG- 90
+ E+ + LL+ADV KLV E+ NI++ + +K+ + +++EL +
Sbjct: 29 VKELQKTLLRADVNVKLVLELTKNIRERALKERPPPYISKQEWFIKIVYDELSSLFGGDI 88
Query: 91 KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQ 150
KP P K P +IM VG+QGSGKTTT K AY++++ G++P L+C DT+R A++QL Q
Sbjct: 89 KPQVFPVK-TPYIIMLVGVQGSGKTTTAAKIAYFYKRYGYRPCLICTDTYRPAAYEQLYQ 147
Query: 151 NATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK--QEAALFEEMRQV 208
+ + +PF G SDP+ IA + + N ++II+DT+GRH +E L +EM+ +
Sbjct: 148 LSKQIDVPFCGDPKSSDPIDIAKKCLSYCINNNTNIIIIDTAGRHGYGEEEYLLKEMQDI 207
Query: 209 SEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKS 268
++A NPD V+ ++D+SIGQ A+D A F + +G++++TK+DG AKGGGALSAVAATK+
Sbjct: 208 AKAVNPDEVMLIIDASIGQKAYDLALRFHSATPIGSIVITKLDGTAKGGGALSAVAATKA 267
Query: 269 PVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQQPELLQKLSEGN 327
+ FIGTGE + E EVFD + FV R+LG+GD +DK+ + D + L + ++ G
Sbjct: 268 IIKFIGTGEKIPELEVFDPRRFVGRILGLGDLPTLIDKLKSIERSSDLEKRLTKAIATGK 327
Query: 328 FTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEE 387
+L +Y Q Q + K+GP+ ++ ++PG S + + K S+ K+ +++ +++SMT EE
Sbjct: 328 ISLVDLYLQIQTMRKLGPLSKILQLIPGLSLLPVDDKQLKISEEKMDKWLAIINSMTYEE 387
Query: 388 LDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMK 433
L NP +++ SRI RIA GSG +V E+L+ Y+ + + MK
Sbjct: 388 L--RNPNIIDKSRINRIAIGSGTTADDVKELLKYYELVNTMIKNMK 431
>gi|48477967|ref|YP_023673.1| signal recognition particle protein Srp54 [Picrophilus torridus DSM
9790]
gi|48430615|gb|AAT43480.1| signal recognition particle protein Srp54 [Picrophilus torridus DSM
9790]
Length = 456
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 169/430 (39%), Positives = 256/430 (59%), Gaps = 20/430 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL L S+ +++S ++ ID++ + E +I RALL+ADV KLV + +++
Sbjct: 1 MVLENLSSSLKDVFKKISGSSYIDKETIKEVSKDIQRALLKADVNVKLVISLTNRLQERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG +++ I + I+ EL +L G+ S + KP IM VGL G+GKTTT K
Sbjct: 61 ATEKPPAGMSEQDFILKIIYEELLSIL--GEESRI--ELKPQTIMLVGLYGNGKTTTAGK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + KKG L+ AD R GA++QL+Q + + FYG E DPV+I G++
Sbjct: 117 LARFFIKKGLSVGLIAADVHRPGAYEQLEQISKQVNSLFYGEKNEKDPVKIIKNGLDRLG 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ + I+DTSGR + L +E++++ PD V++V+D+++GQ QA+ +V
Sbjct: 177 --DAKVKIIDTSGRDSLDDELIDEIKRIKNEIKPDEVLYVVDATLGQQVGPQAKVLNDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
S+ VI+TKMDG KGGGALSAVA KSPV FIGTGEHM++FEVF+ + F+SRLLGMGD
Sbjct: 235 SISGVIITKMDGTGKGGGALSAVAEIKSPVYFIGTGEHMEDFEVFNPRKFLSRLLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPE-LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
M+ + E +++ E L KL G F L+ MY+ ++ K G + ++F+ +P
Sbjct: 295 DALMEAVKETNITEEEAEKSLDKLMSGKFNLKDMYDVWEKFSKPGLLKKIFNSMP---LS 351
Query: 360 LMPKGREKESQAKIKR-------YMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQV 412
+P G +K + ++I R Y ++DSMT EL+ NP ++N RI RI+ GSG+
Sbjct: 352 RIPGG-DKLNDSEIDRANEKLNIYRVILDSMTYSELE--NPDIINAKRIKRISIGSGKDE 408
Query: 413 REVMEMLEEY 422
REV +L+EY
Sbjct: 409 REVRALLKEY 418
>gi|170291202|ref|YP_001738018.1| GTP-binding signal recognition particle [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170175282|gb|ACB08335.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Candidatus Korarchaeum cryptofilum OPF8]
Length = 437
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 174/433 (40%), Positives = 264/433 (60%), Gaps = 14/433 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG S+ A+ ++ ++IDE +NE + E+ R+L++ADV KLV E+ IK+
Sbjct: 1 MVLEKLGSSLRNAVSKIMGKSVIDEAAVNEFVREVQRSLIEADVDVKLVLEISRRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS-VIMFVGLQGSGKTTTCT 119
+ G ++R + + ++ EL +L KP+ P + K + VIM VG++GSGKTTT
Sbjct: 61 LKESPPPGFSRRDLAVKILYEELTNLLGR-KPAEIPMESKKTNVIMMVGIEGSGKTTTVA 119
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A++ K+ K ++ AD R + Q++Q IP + S DPV I EG+E F
Sbjct: 120 KLAFWLSKRFGKVGIISADVMRPASKLQIEQ-LVGPDIPVF-SKESKDPVEIMREGIEFF 177
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K+E + +I+DT+GRHK E++L E+ E PDLVI +D +IGQAA+ QA+AF +
Sbjct: 178 KRERYNFVIIDTAGRHKDESSLMSELDAYRE-IGPDLVILTIDGTIGQAAYAQARAFAEK 236
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V VG VIVTK+DG AKGGGALSAVAA+ +P++FIGTGE +D+ E FD + FVSRLLG GD
Sbjct: 237 VPVGGVIVTKLDGAAKGGGALSAVAASGAPILFIGTGERVDDLERFDPERFVSRLLGGGD 296
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+I E ++ L++++S+G F L E Q + K GP+ ++ M+PG
Sbjct: 297 IIELAMRIEEAF---KESRLMERMSKGKFDLEDFREYIQQLGKAGPMEKLLEMVPGIGGR 353
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
+ + + ++ R++ +++SMT EE +P L+ SRI RIARGSG +EV ++L
Sbjct: 354 V----QLDVNSGEMDRWIAIINSMTPEE--RRDPSLIRGSRIERIARGSGVTAKEVRKLL 407
Query: 420 EEYKRLAKIWSKM 432
+ Y + K+ M
Sbjct: 408 KSYHQAKKLIESM 420
>gi|257075577|ref|ZP_05569938.1| signal recognition particle protein Srp54 [Ferroplasma acidarmanus
fer1]
Length = 457
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 178/469 (37%), Positives = 263/469 (56%), Gaps = 32/469 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL L S+ ++++S ++ ID+ + E EI RALL+ADV KLV ++ +++
Sbjct: 1 MVLDNLSESLKSIMRKISGSSFIDKDTIKEVTKEIQRALLKADVNVKLVLKLTNTVQERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG + I + I+ EL K+L +F K P IM VGL G+GKTTT K
Sbjct: 61 LNEKPPAGMTAQDYIIRVIYEELLKILGT-DSNFDLK---PQTIMLVGLYGNGKTTTAGK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A KKG L+ AD R GAF+QL+Q + FYG E + ++I G++
Sbjct: 117 LARLFMKKGLSTGLIAADVHRPGAFEQLQQISGDVNCGFYGEKEEKNALKIVRNGIKEL- 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ + I+DTSGR + L +E+ ++ E NPD V+FV+D+++GQ A QA+ +V
Sbjct: 176 -EDFKIKIIDTSGRDSLDQELIDEVHEIKEKINPDTVLFVIDATLGQQAGPQAKTLHDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
++ VI+TKMDG K GGALSAVA +SPV FIGTGEHMD+ ++F+ K F+SRLLGMGD
Sbjct: 235 NIDGVIITKMDGTGKAGGALSAVADIQSPVYFIGTGEHMDDIQIFNPKKFLSRLLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPEL-LQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
M+ + E +++ E L KL G F L+ MY+ ++ K G + + F LP
Sbjct: 295 DALMEVVKETNITEEEAEASLDKLMSGKFDLKDMYDVWEKFAKPGLLKKFFGALPLGK-- 352
Query: 360 LMPKGRE-KESQ-----AKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 413
MP G + ESQ K++ Y ++DSMT EL+ NP ++N RI RIA GSG+ +
Sbjct: 353 -MPGGNKLDESQLDQADEKLRLYRVILDSMTFYELE--NPDVLNAKRIKRIAAGSGQGEK 409
Query: 414 EVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQG 462
V ++L+EY + K M ++ +N N + M K +G
Sbjct: 410 NVRQLLKEYNAMKK--------------NMKSIKKNRNFKKMLKTQLKG 444
>gi|13541823|ref|NP_111511.1| signal recognition particle protein Srp54 [Thermoplasma volcanium
GSS1]
gi|21362960|sp|Q979Y8.1|SRP54_THEVO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|14325260|dbj|BAB60164.1| signal recognition particle protein srp54 [Thermoplasma volcanium
GSS1]
Length = 455
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/438 (37%), Positives = 257/438 (58%), Gaps = 12/438 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL L S+ I++++ +T ID+ + E ++ R LL+ADV + V + +++
Sbjct: 1 MVLESLSSSLRETIRKITGSTYIDKNTVKEISKDLQRILLKADVNVQTVLNITKEMERRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G + + + I+ EL K+L G+PS + KP IM VGL G GKTT+ K
Sbjct: 61 LEEKPPVGMAHQDYMVKIIYEELLKIL--GEPSNV--ELKPQTIMLVGLYGHGKTTSAGK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+ + KKG L+ AD R A++QL+Q A FYG E DPV+I G+E K
Sbjct: 117 LSRFFMKKGLSAGLIAADVHRYAAYEQLQQIAESVNAKFYGDPKEKDPVKIIKNGLEVLK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ + I+DTSGR ++ L EE+R++ EA PD V+ V+D+++GQ A +++A +V
Sbjct: 177 --DAQVKIIDTSGRDSLDSDLIEEIRRIKEAVKPDQVLMVIDATMGQQAGPESKAINDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +I+TKMDG AKGGGALSAVA + P+ FIGTGEHMD+ E+FD K F+SRLLG+GD
Sbjct: 235 GVTGIIITKMDGTAKGGGALSAVAKMRVPIYFIGTGEHMDDMEIFDPKKFLSRLLGLGDL 294
Query: 301 SGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS-- 357
+ + E + ++ + +KL G F L+ MY+ ++ + G + ++ LP
Sbjct: 295 ETLFETVKEANITEEEAQKSFEKLMTGKFNLKDMYDVWEKFSRPGLMKKLVDSLPLAKLP 354
Query: 358 -SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 416
S+ + + ++ K++RY +MDSMT +EL+ NP+++N RI RIARG+G + +V
Sbjct: 355 GSQKINDDQILTAEQKLQRYRIIMDSMTFQELE--NPEIINAKRITRIARGAGVREEDVR 412
Query: 417 EMLEEYKRLAKIWSKMKG 434
+L+E+K + MKG
Sbjct: 413 MLLKEFKAMKNNMKLMKG 430
>gi|325968148|ref|YP_004244340.1| GTP-binding signal recognition particle SRP54 G- domain
[Vulcanisaeta moutnovskia 768-28]
gi|323707351|gb|ADY00838.1| GTP-binding signal recognition particle SRP54 G- domain
[Vulcanisaeta moutnovskia 768-28]
Length = 446
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 254/432 (58%), Gaps = 13/432 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+ + + ++ IDE L E L EI R LL+ADV +V + I++ + G
Sbjct: 9 AFTNLVNRIRGLNYIDEATLKEILREIQRILLRADVSADVVSSITKTIEERFRQEKPPQG 68
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
+ + ++ EL K L + PS K +P +M +G++GSGKTTT K A ++ K
Sbjct: 69 ITSKEFLLYLLYQELVKALGGEEVPSVNISK-RPYKLMLIGIEGSGKTTTAAKLARFYIK 127
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+ K L+ DT+R GA+ QLKQ A K FYG DP+ I G+E ++ DLI
Sbjct: 128 RNLKVGLIETDTYRPGAYYQLKQLAEKVNALFYGEEDSKDPIAILRHGLEYMQRNKVDLI 187
Query: 188 IVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIV 247
I+DT+GRH+ E L +E + + + PD V+ V+D++IG+ A Q +AF + V + +V +
Sbjct: 188 IIDTAGRHRNEEELLKEAKAIYDEAKPDEVMLVIDATIGRQAAAQTEAFMKYVPIHSVFL 247
Query: 248 TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKI 307
TKMD AK GGAL++V + + + FIG GE +DE E+FD FVSRLLGMGD ++K+
Sbjct: 248 TKMDSTAKAGGALTSVIRSGARIKFIGIGEDIDEVEIFDANKFVSRLLGMGDLEALIEKV 307
Query: 308 HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG------FSSELM 361
+ +++ ++++++ EG L + +Q +I+K+GP+ ++ +LP + + ++
Sbjct: 308 RAI---EEEDKIMEEIEEGKINLLTIKKQIDSIMKLGPLSKIMELLPASMLPMQYRTVML 364
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
+ + +Q ++R+ ++DSMT EEL NP+++N SRI RIA+G+G ++V E+L
Sbjct: 365 DEEKVSNAQEMLRRWRHILDSMTKEEL--LNPEIINASRIRRIAKGAGVTSKDVKELLNY 422
Query: 422 YKRLAKIWSKMK 433
Y+ + K+ +++K
Sbjct: 423 YQLMRKMVNQIK 434
>gi|159040882|ref|YP_001540134.1| GTP-binding signal recognition particle [Caldivirga maquilingensis
IC-167]
gi|157919717|gb|ABW01144.1| GTP-binding signal recognition particle SRP54 G- domain [Caldivirga
maquilingensis IC-167]
Length = 449
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 159/432 (36%), Positives = 260/432 (60%), Gaps = 15/432 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKK-IVNLDDLAA 67
+I I ++ +T+IDE+ L L ++ RAL++ADV KLV E+ +I++ +L
Sbjct: 7 AIGSIISRIRGSTLIDEETLRSILRDLQRALIRADVDVKLVYELTKSIEEEFKEAKELPP 66
Query: 68 GHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
G + + ++ +L +L K K KP ++M VG +GSGKTTT K A ++ K
Sbjct: 67 GLTAKDYLVYLLYRKLTDLLGGDKEPDVEVKTKPYILMLVGTEGSGKTTTAGKLANFYIK 126
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G K L+ DT R GAFDQL+Q A + K F+G + + V IA G+ DLI
Sbjct: 127 RGLKVGLIETDTIRPGAFDQLRQLAERVKAMFFGDPSLGNAVNIAKAGLSRMISSKADLI 186
Query: 188 IVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIV 247
I+DT+GRH+ E L E++++ EA P+ V+ V+D++ G+ QA+AF + V V ++ +
Sbjct: 187 IIDTAGRHRNEEELLSEVKEIYEAVKPNEVMLVVDATNGKQVGAQAEAFSKYVPVNSIFI 246
Query: 248 TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKI 307
TK+D AKGGGAL + T + + FIG GE +++ EVF+ + FV+RL+GMGD +DK+
Sbjct: 247 TKLDSTAKGGGALVSAVKTGARIKFIGNGEDIEDIEVFNPRRFVARLMGMGDVESLLDKV 306
Query: 308 HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGRE- 366
M+++ E+L+ + G FTL + +Q + + K+GP+ ++ MLP LMP+ +E
Sbjct: 307 K---AMEEEEEVLEDIETGKFTLLTLMKQLEAMGKLGPLSRILQMLP---MGLMPQLKEL 360
Query: 367 -----KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
+Q +++++++++ SMT EEL NP ++N SRI RIA+GSG R+V E+L
Sbjct: 361 NDDQLMNAQDRMRKWLSILRSMTKEEL--LNPNILNASRIRRIAKGSGVTPRDVRELLRY 418
Query: 422 YKRLAKIWSKMK 433
Y ++++ S +K
Sbjct: 419 YNEMSRMMSSLK 430
>gi|156937833|ref|YP_001435629.1| signal recognition particle subunit FFH/SRP54 (srp54) [Ignicoccus
hospitalis KIN4/I]
gi|156566817|gb|ABU82222.1| signal recognition particle subunit FFH/SRP54 (srp54) [Ignicoccus
hospitalis KIN4/I]
Length = 442
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 168/426 (39%), Positives = 268/426 (62%), Gaps = 6/426 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
+ A+++ ++ E +N + E+ + L+++DV KLV ++ I++ + G
Sbjct: 5 VREAVKKFLRSSADYETSVNLFIKELQKTLIKSDVNVKLVLQLTKRIRERALKERPPPGA 64
Query: 70 NKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
++R + ++ EL + K P P K P VIM VG+QGSGKTTT K A +++ +
Sbjct: 65 SRRDWFVKIVYEELANLFGGDKEPELKPPK-VPWVIMMVGVQGSGKTTTAGKLARFYKVR 123
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G++ ALV ADT+R GA DQL+Q A +AK+ FY + D V IA GVE K + ++II
Sbjct: 124 GYRVALVAADTYRPGAKDQLRQLAERAKVLFY-TEPGDDAVGIAKRGVEWAKSQGAEIII 182
Query: 189 VDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 248
VDT+GRHK EA L +EM+++SEA PD V+ V+D+SIGQ A A+AF ++ +G+++VT
Sbjct: 183 VDTAGRHKNEAELLKEMKEMSEAIKPDEVMLVIDASIGQQAKALAEAFHKTTPIGSIVVT 242
Query: 249 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 308
K+DG AKGGGALSAVA T + + F+GTGE ++E E F K FV+R+LG+GD G ++++
Sbjct: 243 KLDGTAKGGGALSAVAVTGATIKFVGTGEKLEELEPFKPKKFVARILGLGDLEGLLERLK 302
Query: 309 EVVPMDQQPELLQK-LSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREK 367
+ D+ E+ QK L +G+ TL+ +Y Q ++ KMG + ++ MLPG L K +
Sbjct: 303 GLEEADKLEEISQKVLEKGDITLKDLYYQIVSVKKMGSLKKLLQMLPGVGLALNDKVLGQ 362
Query: 368 ESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAK 427
+ +++ +++SMT EEL+ P +++ SR+ RIA GSG V++V E+L+ Y+ K
Sbjct: 363 VDDKVLDKWLAILNSMTLEELE--KPNIIDRSRMRRIAIGSGTSVKDVEELLKHYQMTRK 420
Query: 428 IWSKMK 433
+ ++K
Sbjct: 421 MIRQLK 426
>gi|319790268|ref|YP_004151901.1| signal recognition particle protein [Thermovibrio ammonificans
HB-1]
gi|317114770|gb|ADU97260.1| signal recognition particle protein [Thermovibrio ammonificans
HB-1]
Length = 448
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/439 (37%), Positives = 260/439 (59%), Gaps = 6/439 (1%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L + AI+++ ID++ LN+ L EI ALL+ADV +K+V + +IK+ ++
Sbjct: 5 LAERVQSAIEKIGRKGRIDQETLNKGLREIKLALLEADVNYKVVSKFINDIKEKALGAEV 64
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
G N + + + +++EL + L G+ + K KP+VI+ +GLQGSGKTTT K A Y
Sbjct: 65 VKGVNPAQQLVKIVYDELVEALG-GEGAKLELKSKPAVILLIGLQGSGKTTTAAKLANYL 123
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
+K+G K L AD +R A QLK+ K +P + E D V+IA + ++ K+EN D
Sbjct: 124 KKQGKKVLLTSADVYRPAAMLQLKKLGDKIGVPVFLEEDEKDAVKIAKDALKKAKEENYD 183
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
++I+DT+GR + L EE +++ E TNPD V+FV+D+ GQ + + A+AF ++V + +
Sbjct: 184 VLIIDTAGRLHIDEELLEEAKRIKEETNPDEVLFVIDAMTGQESVNIAKAFNEAVGMTGI 243
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
++TKMD A+GG ALS T P+ F G GE +++F+ F SR+LGMGD ++
Sbjct: 244 VLTKMDSDARGGVALSVKGVTGKPIKFAGVGEKIEDFQPFYPDRVASRILGMGDIVSLVE 303
Query: 306 KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE-LMPKG 364
K EV+ + + +KL G FTL +Q Q I ++GP+ QV M+PG S+ ++ +
Sbjct: 304 KAQEVIDEKEALSMQEKLLSGEFTLEDFRKQLQMIQRLGPLQQVIRMIPGLGSQKILKQL 363
Query: 365 REKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKR 424
E K+KR +++SMT EE N ++N SR RIARGSG V+EV +L+++ +
Sbjct: 364 EEVIDDKKLKRIEAIINSMTPEE--RRNHAIINASRKRRIARGSGTSVKEVDALLKQFVQ 421
Query: 425 LAKIWSKMKGL--KIPKKG 441
+ +M+ + K+ KKG
Sbjct: 422 MKMAMKQMRKMQKKLAKKG 440
>gi|307596389|ref|YP_003902706.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Vulcanisaeta distributa DSM 14429]
gi|307551590|gb|ADN51655.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Vulcanisaeta distributa DSM 14429]
Length = 446
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 144/431 (33%), Positives = 251/431 (58%), Gaps = 11/431 (2%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+ + + ++ + IDE L E L EI R LL+ADV +V + I++ + G
Sbjct: 9 AFTNLVNRIRGLSYIDEATLKEVLREIQRILLRADVSADVVLSITKTIEERFRQEKPPQG 68
Query: 69 HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
+ + ++ EL K L + +P +M +G++GSGKTT+ K A ++ K+
Sbjct: 69 ITSKEFLLYLLYQELVKALGGEEAPNVNVSKRPYKLMLIGVEGSGKTTSAAKLARFYIKR 128
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
+ L+ DT+R GA+ QLKQ A + FYG DP+ I G+E ++ DLII
Sbjct: 129 NLRVGLIETDTYRPGAYHQLKQLAERVNALFYGEENSKDPIAILRHGLEYMQRNRVDLII 188
Query: 189 VDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 248
+DT+GRH+ E L +E + + + PD V+ V+D+++G+ A Q +AF + V + +V +T
Sbjct: 189 IDTAGRHRNEEELLKEAKAIYDEAKPDEVMLVIDATVGRQAAAQTEAFMKYVPIHSVFLT 248
Query: 249 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 308
KMD AK GGAL++V + + + FIG GE +DE EVFD +VSRLLGMGD ++KI
Sbjct: 249 KMDSTAKAGGALTSVIRSGARIKFIGVGEDIDEIEVFDANKYVSRLLGMGDLEALIEKIR 308
Query: 309 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG------FSSELMP 362
+ +++ ++++++ EG L + +Q +I+K+GP+ ++ +LP + + ++
Sbjct: 309 AI---EEESKIMEEIEEGKINLLTIKKQIDSIMKLGPLSKILELLPTSMLPMQYRAVMLD 365
Query: 363 KGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY 422
+ + +Q ++R+ ++DSMT EEL NP ++N SRI RIA+G+G ++V E+L Y
Sbjct: 366 EEKMSNAQEMLRRWRHILDSMTKEEL--LNPDIINASRIRRIAKGAGVTPKDVKELLNYY 423
Query: 423 KRLAKIWSKMK 433
+ + ++ +++K
Sbjct: 424 QLMKRMVNQIK 434
>gi|289548587|ref|YP_003473575.1| signal recognition particle protein [Thermocrinis albus DSM 14484]
gi|289182204|gb|ADC89448.1| signal recognition particle protein [Thermocrinis albus DSM 14484]
Length = 437
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 250/440 (56%), Gaps = 16/440 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+A++++ N + EK LN+ L +I ALL+ADV + +V+ I++
Sbjct: 1 MLELLTDRFSKALERLRNTRKLTEKQLNDILRDIRMALLEADVDYDVVKTFLKRIRERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+DL + + ++ EL K+L K KKG ++FVGLQG+GKTTT K
Sbjct: 61 TEDLKNNLSPAESVLLTVYEELVKILGETKEDL--KKG---TVLFVGLQGTGKTTTVGKL 115
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
AYY + KG+K AL D R A QL++ A + ++P+Y + E DPV+IA V+ K
Sbjct: 116 AYYLKGKGFKVALTSTDVRRPAAILQLQRLAERVEVPYYSAEGEEDPVKIAQIAVKRAKD 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E D +++DT+GR + L EE+R++ E NP +++V D+ GQ A A+ F ++V
Sbjct: 176 EGVDYLLLDTAGRLHIDEELMEELRRIKETVNPSEILYVADAMQGQEALRAAKTFHETVG 235
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+ V++TKMDG A+GG ALS A P+ F+G GE +++ E F R+LG+GD
Sbjct: 236 LTGVVLTKMDGDARGGVALSVREALGVPIKFMGVGEKLEDIEPFYPDRVAQRILGLGDIQ 295
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG---FSS 358
+++ +V+P D+ L ++ +G F L M +Q + +L MGP+ ++ MLPG ++
Sbjct: 296 SLVERAQQVIPEDEAQALAVRIMKGEFDLEDMLKQIRFVLNMGPLDKIIGMLPGLGQYAK 355
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
L K + +KR ++ SMT EE NP ++N SR RIARGSG V EV ++
Sbjct: 356 HL------KLDEKLLKRKEAIILSMTKEE--RKNPAIINLSRKQRIARGSGTTVSEVNKL 407
Query: 419 LEEYKRLAKIWSKMKGLKIP 438
L+EY+ K+ K+K K P
Sbjct: 408 LKEYEEARKLIRKLKNAKGP 427
>gi|15791232|ref|NP_281056.1| signal recognition particle [Halobacterium sp. NRC-1]
gi|169236988|ref|YP_001690188.1| signal recognition particle 54K protein [Halobacterium salinarum
R1]
gi|12230636|sp|Q9HMN5.1|SRP54_HALSA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|229558602|sp|B0R7X3.1|SRP54_HALS3 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|10581860|gb|AAG20536.1| signal recognition particle [Halobacterium sp. NRC-1]
gi|167728054|emb|CAP14842.1| signal recognition particle 54K protein [Halobacterium salinarum
R1]
Length = 460
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/441 (36%), Positives = 254/441 (57%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E+ +++ + EI R+LLQADV LV ++ +I +
Sbjct: 1 MVLDDLGSSLRGTLDTLRGKSRISEEDVDKVVKEIQRSLLQADVDVDLVMDLSESITERS 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ TP + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLRIVYEELVGLV----GDSTPIPLEEQTIMLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA+V DTFR GA++Q + A +A++ FYG DPV+IA +G+
Sbjct: 117 MAWWFSKKGLRPAIVQTDTFRPGAYEQAAEMADRAEVDFYGEPDSDDPVQIARDGLAATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L E+ ++ PD + V+D++IGQ A QA+ F S+
Sbjct: 177 --DADVHIVDTAGRHALEDDLIAEIEEIEGVVEPDRSLLVLDAAIGQGAKQQARQFDASI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGG+L+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVAITKLDGTAKGGGSLTAVNETDSTIAFLGSGETVQDIERFEPDSFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
+++ + Q + + L +G FTL M +Q Q + MGP+ QV M+PG
Sbjct: 295 KQLTERVERAMEETQDDDEDWDPEDLMKGEFTLHDMRKQMQAMDNMGPLDQVMDMIPGMG 354
Query: 358 SELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
LM P +Q +++ + +MDSMT E+ ++P+ + S+I RIARGSG+
Sbjct: 355 GGLMDELPDDAMDVTQERMRGFEVIMDSMTEAEM--ADPRSVGASQIRRIARGSGQPEDR 412
Query: 415 VMEMLEEYKRLAKIWSKMKGL 435
V E+L+++K +A+ + +G+
Sbjct: 413 VRELLDQHKMMAQTMQQFQGM 433
>gi|67624587|ref|XP_668576.1| signal recognition particle protein SRP54 [Cryptosporidium hominis
TU502]
gi|54659796|gb|EAL38359.1| signal recognition particle protein SRP54 [Cryptosporidium hominis]
Length = 296
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/295 (50%), Positives = 201/295 (68%), Gaps = 9/295 (3%)
Query: 205 MRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVA 264
M QV TNPD V+FVMDS IGQA +DQA AF +V VG+VI+TK+DGHAKGGGALSAVA
Sbjct: 1 MEQVVMETNPDDVVFVMDSHIGQACYDQAMAFCNAVDVGSVIITKLDGHAKGGGALSAVA 60
Query: 265 ATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLS 324
AT +P+IFIGTGEH DEFE F+ K FVSRLLG+GD SG M KI+EVVP+D+QP+++ +L
Sbjct: 61 ATGAPIIFIGTGEHFDEFEPFETKGFVSRLLGLGDISGLMAKINEVVPLDRQPDMVNRLV 120
Query: 325 EGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMT 384
+G FTLR MYEQFQN+L MG + SM+PG ++ K E+ ++K++M +MDSMT
Sbjct: 121 QGIFTLRDMYEQFQNMLNMGSPSALLSMIPGMGPNILAKEDEQAGIERLKKFMVIMDSMT 180
Query: 385 NEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKM--KGLKIPKKGE 442
ELD N K +N SR+ RI+RGSG ++V E+L ++K +K+ ++ GL +
Sbjct: 181 ESELD--NEKTINASRVERISRGSGTSNQDVQELLSQHKMFSKMVGQIGKLGLGKKGGLD 238
Query: 443 MSALSRNMN--AQHMSKVLPQGMLKQIGGVGGLQNLMKQMG---STKDMMGMFGG 492
MS++ +N Q M K + + K +GG + N+M++M + D MFGG
Sbjct: 239 MSSIMKNPAQLIQKMQKAIDPRIFKHMGGAQNMMNMMREMDKFQGSPDFQKMFGG 293
>gi|327310166|ref|YP_004337063.1| GTP-binding signal recognition particle SRP54 [Thermoproteus
uzoniensis 768-20]
gi|326946645|gb|AEA11751.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Thermoproteus uzoniensis 768-20]
Length = 437
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/419 (37%), Positives = 248/419 (59%), Gaps = 9/419 (2%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
S+ ++++ IDE+ L E E+ R+LL+ADV +VR + + + G
Sbjct: 9 SKLVEKIRGVEYIDEQTLQEISRELQRSLLKADVPLDMVRAFTDTAVRRIREERPPPGIP 68
Query: 71 KRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
+ + I+ EL K+L +P K +P VIM +G++GSGKTTT K A ++ K+G
Sbjct: 69 VKDFVIYVIYQELVKLLGGEAEPDLKLPK-RPYVIMLLGVEGSGKTTTAAKIALFYIKRG 127
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
K +V DT R A+DQLKQ A + FYG +D V IA G+E K DL++V
Sbjct: 128 LKVGVVETDTIRPAAYDQLKQLAERVGARFYGERDGNDAVGIARRGLEQMK--GVDLVLV 185
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DT+GRHK E +L EE++ + +A PD V+ V+D+++G+ A QA+AF + V + +V +TK
Sbjct: 186 DTAGRHKNEQSLLEEVKAIYDAIKPDEVMLVVDATVGRQAAAQAEAFMKYVPIHSVAITK 245
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
MD A+GGGAL+AVA T + V FIG GE +DE E F + FV+R+LGMGD ++++
Sbjct: 246 MDSTARGGGALAAVAKTGARVKFIGVGEGVDEIEPFSPRKFVARVLGMGDLETLVERVKA 305
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
V ++ L++L G L +Q +LK+GP+ +V +LPG + + + + S
Sbjct: 306 VFEEEEV---LEELESGRLDLLTFKKQIDALLKLGPLSKVLELLPGTLASKISDEQIELS 362
Query: 370 QAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKI 428
Q ++R+ ++ SMT EEL +P ++N SRI RIA G+G ++V +ML+ Y+ + K+
Sbjct: 363 QKNLRRWRAILSSMTEEEL--RDPSILNASRIRRIAIGAGVTPKDVKDMLKVYESMKKM 419
>gi|302349271|ref|YP_003816909.1| Signal recognition 54 kDa protein [Acidilobus saccharovorans
345-15]
gi|302329683|gb|ADL19878.1| Signal recognition 54 kDa protein [Acidilobus saccharovorans
345-15]
Length = 444
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/414 (38%), Positives = 255/414 (61%), Gaps = 15/414 (3%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
+ E + ++ R L++ADV LV+ + I++ + G ++R + ++ EL K+
Sbjct: 23 VEEFIRDLQRELIRADVNVALVKRLSDAIRQRALEQEPPPGVSRRDWFLKIVYEELVKVF 82
Query: 88 ---DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGA 144
+P PS P+K P VI+ VG+QGSGKTTT K A ++ +G++ LV DT+R GA
Sbjct: 83 GGEEP--PSVEPRK-VPWVILLVGVQGSGKTTTAGKLARFYSARGYRVGLVETDTYRPGA 139
Query: 145 FDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK--QEAALF 202
+QL+ A + FYG IA GV+ + +IIVDT+GRH E AL
Sbjct: 140 LEQLRTLAQMSGALFYGE-PAGRAEEIASRGVKELESRGAQVIIVDTAGRHGYGDEQALL 198
Query: 203 EEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSA 262
+EMR++++A +PD V V+D++IGQ AFD A+ F ++ +G +IVTK+DG AKGGG LSA
Sbjct: 199 DEMRRIADAVSPDEVALVVDAAIGQRAFDLARRFHEATPIGTIIVTKLDGTAKGGGVLSA 258
Query: 263 VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQK 322
VAAT + V F+GTGE +DE E FD + FVSR++G+GD ++++ E ++ +++++
Sbjct: 259 VAATGARVKFVGTGEKVDELEPFDPQGFVSRIMGLGDIRSLLERVREAEAEERAVKVVEE 318
Query: 323 -LSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGRE--KESQAKIKRYMTM 379
+ +G +R +Y Q ++I ++GP+ +V MLP S+ + G E K + KI +++ +
Sbjct: 319 DIEKGRVNMRTIYAQLKSIRRLGPLSRVLEMLP-LSTLPVKVGDEQVKLGEEKINKWLHI 377
Query: 380 MDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMK 433
++SMT EELD +P +++ SR+ RIA GSG V +V E+L YK + + ++K
Sbjct: 378 IESMTYEELD--DPDIIDRSRMRRIAVGSGTTVNDVKELLAYYKSVKAVVKRLK 429
>gi|294055143|ref|YP_003548801.1| signal recognition particle protein [Coraliomargarita akajimensis
DSM 45221]
gi|293614476|gb|ADE54631.1| signal recognition particle protein [Coraliomargarita akajimensis
DSM 45221]
Length = 453
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 245/423 (57%), Gaps = 11/423 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-KIV 60
+L L + A++ + + E+ + E L E+ +ALL ADV FK+ RE +N+K + V
Sbjct: 1 MLENLTDKLGSALRNLRGVGKLTEENMEEALKEVRKALLSADVHFKVAREFVSNVKEQCV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ L + +++I+ I +EL K+L G KK P IM VGL GSGKTT+ K
Sbjct: 61 GQEVLKSVTPGQQVIK-IIHDELVKLLGEGTTELEDKK--PLRIMMVGLHGSGKTTSSGK 117
Query: 121 YA-YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A Y +K+ ++PAL+ D +R A DQL+ + FYG E + V I G+E
Sbjct: 118 LANYLAKKRDYRPALIACDVYRPAAIDQLETLSQTVGCEFYGDREEKNVVTIGKRGLEAA 177
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + +LII DT+GR + + L EE++ + A PD V+ V D+++GQ A + A+ F ++
Sbjct: 178 KAADANLIIFDTAGRLQIDEDLIEEIKDLKAAVQPDEVLLVADAALGQEAVNVAKHFHEA 237
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V V +I+TK+DG A+GG ALS T +P+ F+G GE +DEF+VF SR+LGMGD
Sbjct: 238 VDVTGIILTKLDGDARGGAALSMKTITDTPIKFMGIGEKVDEFDVFHPDRMASRILGMGD 297
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K E + D+ + +K+ + F L +Q Q + KMG +G + SMLPG S
Sbjct: 298 VVSLVEKAQETIDQDEAERMAEKMRKAEFDLNDFLKQMQQVKKMGSLGSIVSMLPGASG- 356
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
+ G E+E K+ R ++ SMT +E S P+L+ SR+ R+A+GSG QVREV +L
Sbjct: 357 -IEIGDEEEK--KMARTEAIILSMTPKE--RSQPRLLKGSRLKRVAQGSGVQVREVNALL 411
Query: 420 EEY 422
+++
Sbjct: 412 KQF 414
>gi|423318442|ref|ZP_17296319.1| signal recognition particle protein [Lactobacillus crispatus
FB049-03]
gi|423321926|ref|ZP_17299797.1| signal recognition particle protein [Lactobacillus crispatus
FB077-07]
gi|405591380|gb|EKB64882.1| signal recognition particle protein [Lactobacillus crispatus
FB077-07]
gi|405595567|gb|EKB68947.1| signal recognition particle protein [Lactobacillus crispatus
FB049-03]
Length = 476
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 158/448 (35%), Positives = 246/448 (54%), Gaps = 10/448 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+K D +++DT+GR + + L EE+ +V + T+PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKKVTHPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K + + ++ +K+ E F +Q Q + KMGP+ Q+ M+PG S+
Sbjct: 301 MLSLIEKAQQDYDAKEAEKVAEKMRENTFDFNDFVDQLQQVQKMGPLDQIMKMIPGLSNN 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M+
Sbjct: 361 PQLKNLNVD-QKQIDHTEAIVYSMTPEE--RENPDMLNPSRRRRIAAGSGRPVVEVNRMI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALS 447
+++K++ + SKM KG M LS
Sbjct: 418 KQFKQMRDMMSKM------SKGNMKGLS 439
>gi|256843368|ref|ZP_05548856.1| signal recognition particle protein [Lactobacillus crispatus
125-2-CHN]
gi|256849811|ref|ZP_05555242.1| signal recognition protein Ffh [Lactobacillus crispatus MV-1A-US]
gi|262046944|ref|ZP_06019904.1| signal recognition particle protein [Lactobacillus crispatus
MV-3A-US]
gi|293381186|ref|ZP_06627194.1| signal recognition particle protein [Lactobacillus crispatus 214-1]
gi|256614788|gb|EEU19989.1| signal recognition particle protein [Lactobacillus crispatus
125-2-CHN]
gi|256713300|gb|EEU28290.1| signal recognition protein Ffh [Lactobacillus crispatus MV-1A-US]
gi|260572926|gb|EEX29486.1| signal recognition particle protein [Lactobacillus crispatus
MV-3A-US]
gi|290922226|gb|EFD99220.1| signal recognition particle protein [Lactobacillus crispatus 214-1]
Length = 476
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 246/448 (54%), Gaps = 10/448 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+K D +++DT+GR + + L EE+ +V + T+PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKKVTHPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K + + ++ +K+ E F +Q Q + KMGP+ Q+ M+PG ++
Sbjct: 301 MLSLIEKAQQDYDAKEAEKVAEKMRENTFDFNDFVDQLQQVQKMGPLDQIMKMIPGLANN 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M+
Sbjct: 361 PQLKNLNVD-QKQIDHTEAIVYSMTPEE--RENPDMLNPSRRRRIAAGSGRPVVEVNRMI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALS 447
+++K++ + SKM KG M LS
Sbjct: 418 KQFKQMRDMMSKM------SKGNMKGLS 439
>gi|295693164|ref|YP_003601774.1| signal recognition particle protein ffh [Lactobacillus crispatus
ST1]
gi|295031270|emb|CBL50749.1| Signal recognition particle protein Ffh [Lactobacillus crispatus
ST1]
Length = 476
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 244/448 (54%), Gaps = 10/448 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINRASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+K D +++DT+GR + + L EE+ +V + +PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAHPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K + + ++ +K+ E F +Q Q I KMGP+ Q+ M+PG ++
Sbjct: 301 MLSLIEKAQQDYDAKEAEKVAEKMRENTFDFNDFVDQLQQIQKMGPLDQIMKMIPGLANN 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M+
Sbjct: 361 PQLKNLNVD-QKQIDHTEAIVYSMTPEE--RENPDMLNPSRRRRIAAGSGRPVVEVNRMI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALS 447
+++K++ + SKM KG M LS
Sbjct: 418 KQFKQMRDMMSKM------SKGNMKGLS 439
>gi|315038606|ref|YP_004032174.1| signal recognition particle protein [Lactobacillus amylovorus GRL
1112]
gi|385817872|ref|YP_005854262.1| signal recognition particle protein [Lactobacillus amylovorus
GRL1118]
gi|312276739|gb|ADQ59379.1| signal recognition particle protein [Lactobacillus amylovorus GRL
1112]
gi|327183810|gb|AEA32257.1| signal recognition particle protein [Lactobacillus amylovorus
GRL1118]
Length = 476
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 155/448 (34%), Positives = 246/448 (54%), Gaps = 10/448 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+K D +++DT+GR + + L EE+ +V + NPD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKKVANPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K + + ++ +K+ E F +Q + + KMGP+ Q+ M+PG ++
Sbjct: 301 MLSLIEKAQQDYDAKEAQKVAEKMRENTFDFNDFVDQLEQVQKMGPLDQIMKMIPGLANN 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M+
Sbjct: 361 PQLKNLSVD-QKQIDHTEAIVYSMTEEE--RENPDILNPSRRRRIAAGSGRPVVEVNRMI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALS 447
+++K++ ++ SK+ KG M LS
Sbjct: 418 KQFKQMREMMSKV------TKGNMKGLS 439
>gi|325957087|ref|YP_004292499.1| signal recognition particle protein [Lactobacillus acidophilus
30SC]
gi|325333652|gb|ADZ07560.1| signal recognition particle protein [Lactobacillus acidophilus
30SC]
Length = 476
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 155/448 (34%), Positives = 246/448 (54%), Gaps = 10/448 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+K D +++DT+GR + + L EE+ +V + NPD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKKVANPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K + + ++ +K+ E F +Q + + KMGP+ Q+ M+PG ++
Sbjct: 301 MLSLIEKAQQDYDAKEAQKVAEKMRENTFDFNDFVDQLEQVQKMGPLDQIMKMIPGLANN 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M+
Sbjct: 361 PQLKNLNVD-QKQIDHTEAIVYSMTEEE--RENPDILNPSRRRRIAAGSGRPVVEVNRMI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALS 447
+++K++ ++ SK+ KG M LS
Sbjct: 418 KQFKQMREMMSKV------TKGNMKGLS 439
>gi|227878849|ref|ZP_03996756.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus crispatus
JV-V01]
gi|227861597|gb|EEJ69209.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus crispatus
JV-V01]
Length = 476
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 155/448 (34%), Positives = 245/448 (54%), Gaps = 10/448 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+K D +++DT+GR + + L EE+ +V + +PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAHPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ + VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDITGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K + + ++ +K+ E F +Q Q + KMGP+ Q+ M+PG ++
Sbjct: 301 MLSLIEKAQQDYDAKEAEKVAEKMRENTFDFNDFVDQLQQVQKMGPLDQIMKMIPGLANN 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M+
Sbjct: 361 PQLKNLNVD-QKQIDHTEAIVYSMTPEE--RENPDMLNPSRRRRIAAGSGRPVVEVNRMI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALS 447
+++K++ + SKM KG M LS
Sbjct: 418 KQFKQMRDMMSKM------SKGNMKGLS 439
>gi|315427553|dbj|BAJ49153.1| signal recognition particle subunit SRP54 [Candidatus Caldiarchaeum
subterraneum]
Length = 466
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/424 (35%), Positives = 259/424 (61%), Gaps = 9/424 (2%)
Query: 3 LAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNL 62
+ +G S+ ++ + D+ + E + I R+LL ADV+ +LV+++ I+
Sbjct: 27 FSSMGRSLKEVFRKFLASPSADKSSVEELVRGIQRSLLMADVRVELVQKISERIRARAFE 86
Query: 63 DDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ L G +++ + + ++ EL +L GKP+ F+ KP V+M +G+QG+GKTTT K
Sbjct: 87 EKLPPGVSRKDSVAKIVYEELINLLG-GKPAQFSTGGKKPYVVMLLGIQGTGKTTTAAKL 145
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y + G+K +VCADT+R A+ QLK +IP YG ++PV IA +G+E FK+
Sbjct: 146 ANYLKVGGYKVGVVCADTYRPAAYQQLKHLLEPRQIPVYGEPENNNPVEIARKGLEHFKQ 205
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
D++I+DT+GRH+Q+ +L +EM+ + + PD I V+D +IGQ A A AF ++
Sbjct: 206 MGVDVVIIDTAGRHRQQESLMDEMKMLEKELKPDENILVIDGTIGQQAGAHAAAFHKATP 265
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+D +GGGAL+AVA T +P+ F+G GE +++F+ F+ +++ LLGM D
Sbjct: 266 VGSIIITKLDTSGRGGGALAAVAETGAPIKFVGVGESVEDFQPFNPSSYIASLLGMPDIE 325
Query: 302 GFMD--KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++ K+ E+ ++Q E + K G FTL M EQ ++ K+GP+ ++ + LP +
Sbjct: 326 SIVERVKLAELTADEKQFEAILK---GKFTLEDMVEQVNSLTKLGPLKKLLAKLPFPGMD 382
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
P + +++Q +IK++ ++ SMT EE ++P +++ SRI RIA G+G R+V E+L
Sbjct: 383 AFPDDQLEKAQDRIKKWNAIIKSMTAEE--KNDPSILDGSRIRRIAYGAGVLERDVRELL 440
Query: 420 EEYK 423
Y+
Sbjct: 441 RSYQ 444
>gi|315425555|dbj|BAJ47216.1| signal recognition particle subunit SRP54 [Candidatus Caldiarchaeum
subterraneum]
gi|343484393|dbj|BAJ50047.1| signal recognition particle, subunit SRP54 [Candidatus
Caldiarchaeum subterraneum]
Length = 466
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 260/424 (61%), Gaps = 9/424 (2%)
Query: 3 LAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNL 62
+ +G S+ ++ + D+ + E + I R+LL ADV+ +LV+++ I+
Sbjct: 27 FSSMGRSLKEVFRKFLASPSADKSSVEELVRGIQRSLLMADVKVELVQKISERIRARAFE 86
Query: 63 DDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ L G +++ + + ++ EL +L GKP+ F+ KP V+M +G+QG+GKTTT K
Sbjct: 87 EKLPPGVSRKDSVAKIVYEELINLLG-GKPAQFSTGGKKPYVVMLLGIQGTGKTTTAAKL 145
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y + G+K +VCADT+R A+ QLK +IP YG ++PV IA +G+E FK+
Sbjct: 146 ANYLKVGGYKVGVVCADTYRPAAYQQLKHLLEPRQIPVYGEPENNNPVEIARKGLEHFKQ 205
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
D++I+DT+GRH+Q+ +L +EM+ + + PD I V+D +IGQ A A AF ++
Sbjct: 206 MGVDVVIIDTAGRHRQQESLMDEMKMLEKELKPDENILVIDGTIGQQAGAHAAAFHKATP 265
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+D +GGGAL+AVA T +P+ F+G GE +++F+ F+ +++ LLGM D
Sbjct: 266 VGSIIITKLDTSGRGGGALAAVAETGAPIKFVGVGESVEDFQPFNPSSYIASLLGMPDIE 325
Query: 302 GFMD--KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++ K+ E+ ++Q E + K G FTL M EQ ++ K+GP+ ++ + LP +
Sbjct: 326 SIVERVKLAELTADEKQFEAILK---GKFTLEDMVEQVNSLTKLGPLKKLLAKLPFPGID 382
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
+P + +++Q +I+++ ++ SMT EE ++P +++ SRI RIA G+G R+V E+L
Sbjct: 383 ALPDDQLEKAQDRIRKWNAIIKSMTAEE--KNDPSILDGSRIRRIAYGAGVLERDVRELL 440
Query: 420 EEYK 423
Y+
Sbjct: 441 RSYQ 444
>gi|58337566|ref|YP_194151.1| signal recognition protein Ffh [Lactobacillus acidophilus NCFM]
gi|227904208|ref|ZP_04022013.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus acidophilus
ATCC 4796]
gi|58254883|gb|AAV43120.1| signal recognition protein Ffh [Lactobacillus acidophilus NCFM]
gi|227868227|gb|EEJ75648.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus acidophilus
ATCC 4796]
Length = 476
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 245/448 (54%), Gaps = 10/448 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P + E D +I +G+
Sbjct: 121 LAYHLQKTQKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSENGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +++DT+GR + + L EE+ +V + +PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKKVADPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+++ + + ++ +K+ E F +Q Q + KMGP+ Q+ M+PG ++
Sbjct: 301 MLSLIERAQQDYDAKEAQKVAEKMRENTFDFNDFVDQLQQVQKMGPLDQIMKMIPGLANN 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M+
Sbjct: 361 PQLKNLSVD-QKQIDHTEAIVYSMTEEE--RENPDILNPSRRRRIAAGSGRPVVEVNRMI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALS 447
+++K++ ++ SK+ KG M LS
Sbjct: 418 KQFKQMREMMSKV------TKGNMKGLS 439
>gi|336053926|ref|YP_004562213.1| signal recognition particle protein [Lactobacillus kefiranofaciens
ZW3]
gi|333957303|gb|AEG40111.1| Signal recognition particle protein [Lactobacillus kefiranofaciens
ZW3]
Length = 476
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 245/449 (54%), Gaps = 10/449 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV F++V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFRVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGEEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ K K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDKLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +++DT+GR + + L EE+ +V + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKQVAEPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K + + ++ +K+ E F +Q + + KMGP+ Q+ M+PG ++
Sbjct: 301 MLSLIEKAQQDYDAKEAQKVAEKMRESTFDFNDFVDQLKQVQKMGPLDQIMKMIPGMANN 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M+
Sbjct: 361 PQLKNLSID-QKQIDHTEAIVYSMTEEE--RENPDILNPSRRRRIAAGSGRPVVEVNRMI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSR 448
+++K++ + SK+ KG M LS+
Sbjct: 418 KQFKQMRDMMSKV------TKGNMKGLSK 440
>gi|339448384|ref|ZP_08651940.1| signal recognition particle protein [Lactobacillus fructivorans
KCTC 3543]
Length = 481
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 259/484 (53%), Gaps = 23/484 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A + + I E L E + EI ALL+ADV FK+VR+ +++
Sbjct: 1 MAFEGLTDRLQKAFKNLRGKGKISESDLRETMREIRLALLEADVNFKVVRQFVKTVQEKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
D+ G N + I + + +EL M+ P+VIM VGLQG+GKTT+ K
Sbjct: 61 KGADVLEGLNPAQQIVKIVNDELTNMMGKSATPLVKSDKIPTVIMMVGLQGAGKTTSAGK 120
Query: 121 YAY-YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A +P ++ AD +R A +QL++ + +P + T+ DPV+I +G++
Sbjct: 121 LAKKLKTDDHARPLMIAADVYRPAAIEQLEKVGEQVGVPVFQEGTDVDPVQIVQDGLKEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K N D +++DT+GR + + L +E++ + + NP+ ++ V+D+ GQ A D A F +
Sbjct: 181 DKNNNDYVLIDTAGRLQIDENLMDELKNIKKVANPNDILLVVDAMTGQNAVDTAVGFNDA 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ + VI+TK+DG +GG ALS A T P++F+G GE +D+ +VF SR+LGMGD
Sbjct: 241 LDITGVILTKLDGDTRGGAALSIRAVTDKPIMFVGQGEKLDDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
F++K + +Q EL +K+ E +F +Q + I KMGPI + M+PG ++
Sbjct: 301 MLSFIEKTQKEYDENQAKELTEKIKENSFDFDDFIDQLEQIQKMGPIQDLVKMIPGMANN 360
Query: 360 LMPKGREKESQAK-IKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
P + K + ++ SMT+EE SNP ++N SR RIARGS + +++V +
Sbjct: 361 --PALKNLNVNPKDLDHIKAIIYSMTSEE--RSNPDVLNPSRRRRIARGSAQPIQQVNRL 416
Query: 419 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNL-M 477
++++ ++ K+ +K+ G MS LS MN+ M G G L NL M
Sbjct: 417 IKQFDQMKKMMNKVSN------GNMSGLSNMMNSAGMGG----------GMTGKLSNLAM 460
Query: 478 KQMG 481
K+MG
Sbjct: 461 KRMG 464
>gi|325294335|ref|YP_004280849.1| signal recognition particle protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064783|gb|ADY72790.1| signal recognition particle protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 448
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 157/418 (37%), Positives = 239/418 (57%), Gaps = 4/418 (0%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L + AI+++ IDE+ L + L EI ALL+ADV +++V +IK+ +
Sbjct: 5 LAEKVQSAIEKIGRKGRIDEETLEKGLREIKLALLEADVNYRVVSNFIKDIKEKALGAKV 64
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
G N + + + + +EL + L G+ KGKPSVI+ +GLQGSGKTTT K A Y
Sbjct: 65 IKGVNPAQQLVKIVHDELVQTLG-GEAEKLNLKGKPSVILLIGLQGSGKTTTAAKLANYL 123
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
+K+G + L D +R A QLK+ + IP + E D V+IA + + K E+ D
Sbjct: 124 KKQGKRVLLTSVDVYRPAAMLQLKKLGDQIGIPVFLEEKEKDAVKIAKDALLKAKDESYD 183
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
+++VDT+GR + L EE R++ E PD +FV+DS GQ + + A+AF + V + +
Sbjct: 184 VLVVDTAGRLHIDEELLEEARKIKEEVVPDETLFVIDSMTGQESVNIAKAFDERVGMTGI 243
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
++TKMD A+GG ALS T P+ F G GE +D+FE F SR+LGMGD ++
Sbjct: 244 VLTKMDSDARGGVALSVKGVTGKPIKFAGVGEKIDDFEPFYPDRVASRILGMGDIVSLVE 303
Query: 306 KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGR 365
K EV+ + + +KL G FTL +Q + I ++GP+ Q+ M+PG SS+ M K
Sbjct: 304 KAQEVIDEKEALSMQEKLLSGEFTLEDFRQQLRMIQRLGPLQQIIRMIPGLSSQKMLKQL 363
Query: 366 EKE-SQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY 422
EK K+KR +++SMT EE N ++N SR RIA+GSG V+EV +++++
Sbjct: 364 EKAIDDKKLKRIEAIINSMTPEE--RRNHAIINASRKRRIAKGSGTSVKEVDALIKQF 419
>gi|15828813|ref|NP_326173.1| signal recognition particle protein [Mycoplasma pulmonis UAB CTIP]
gi|14089756|emb|CAC13515.1| SIGNAL RECOGNITION PARTICLE PROTEIN (FIFTY-FOUR HOMOLOG)
[Mycoplasma pulmonis]
Length = 449
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/433 (35%), Positives = 247/433 (57%), Gaps = 10/433 (2%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
LG I ++IQ+MS T ++E + E + +I ALL+ADV +V++ ++K+ +L
Sbjct: 5 LGNRIQKSIQKMSKKTTLNEADILEVIKDIKFALLEADVNLLVVKKFIKDVKEKALESEL 64
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
N + + + + +EL +L GK KP VIMFVGLQG GKTTT K AYY
Sbjct: 65 IGKLNPSQTMIKIVKDELTTLLG-GKAQEIKIVKKPHVIMFVGLQGGGKTTTVAKVAYYL 123
Query: 126 QKKGW--KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKEN 183
+KK + P LV D +R A DQL+ A + +IP Y + P++ A + ++ KE
Sbjct: 124 RKKKFVENPLLVACDVYRPAAIDQLQTLAKQIQIPVYANDVSVSPIKTARQALDQAYKEK 183
Query: 184 CDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVG 243
DL+I+DT+GR + L EE+ + + PD +IFV D+ GQ + A+ F + +S+
Sbjct: 184 NDLVIIDTAGRLSIDEKLMEELLLIKKEIKPDEIIFVADAMSGQDIINVAKTFHEKLSLS 243
Query: 244 AVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGF 303
+ I+TK+D A+GG ALS P+ FIGTGE + ++F R+LGMGD
Sbjct: 244 SSIITKLDSDARGGAALSIREILNIPIKFIGTGEKISNIDIFHADRMAERILGMGDVLSL 303
Query: 304 MDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPK 363
++K EVV ++ +++ ++ +GNF L + E + + KMG + ++ M+PG ++ +
Sbjct: 304 IEKTEEVVDKNKVKKMMNRMIKGNFDLEDLMENLKQVQKMGKLSKIVKMIPGLGGKI-DE 362
Query: 364 GREKESQAKIKRYMTMMDSMTNEELDSSNPKLM-NDSRIMRIARGSGRQVREVMEMLEEY 422
+ ++++KI+ + ++ SMT+EE NPKL+ N SR RI GSGR V+E ++ E+
Sbjct: 363 SKLDQAESKIRLFTILISSMTSEE--KKNPKLLKNASRKRRIIEGSGRSVQEYNLLVNEF 420
Query: 423 KRLAKIWSKMKGL 435
+ + K KMK L
Sbjct: 421 ETMTK---KMKAL 430
>gi|70943367|ref|XP_741738.1| signal recognition particle 54 kDa protein [Plasmodium chabaudi
chabaudi]
gi|56520308|emb|CAH81656.1| signal recognition particle 54 kDa protein, putative [Plasmodium
chabaudi chabaudi]
Length = 279
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 136/274 (49%), Positives = 189/274 (68%), Gaps = 11/274 (4%)
Query: 222 DSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDE 281
DS IGQ+ DQA AFK SV VG++I+TK+DGHAKGGGALSAV+A P+ FIGTGEH+++
Sbjct: 1 DSHIGQSCHDQAMAFKNSVKVGSIIITKIDGHAKGGGALSAVSAIGCPITFIGTGEHVND 60
Query: 282 FEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNIL 341
FE F+ K FVSRLLG+GD G + + EV+ +++QP+L+ ++++G F LR MY+QFQN+
Sbjct: 61 FEKFEAKSFVSRLLGLGDIDGLVSTLKEVIDIEKQPQLINRIAKGKFVLRDMYDQFQNVF 120
Query: 342 KMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRI 401
KMG + +V SM+PGF + L+ KG EKE KIK+YM +MDSMTNEELD P +NDSR
Sbjct: 121 KMGSLSKVMSMIPGFGTNLISKGTEKEGIDKIKKYMVIMDSMTNEELDCVKP--LNDSRC 178
Query: 402 MRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK---V 458
+RI +GSG ++ ++ E+LE++K L K+ KM L + G M L RN Q MSK +
Sbjct: 179 IRICKGSGTRLSDIRELLEQFKFLQKMVLKMGKLGLRDNG-MGNLMRN-QKQFMSKMNNM 236
Query: 459 LPQGMLKQIGGVGGLQNLMKQMGSTKDMMGMFGG 492
+ M +GG + N++K++ D FGG
Sbjct: 237 MDPNMFNNMGGANNMVNMLKELTKMDD----FGG 266
>gi|227892628|ref|ZP_04010433.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus ultunensis
DSM 16047]
gi|227865560|gb|EEJ72981.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus ultunensis
DSM 16047]
Length = 476
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 244/448 (54%), Gaps = 10/448 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P + E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSEDGEKDVAKIVKDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +++DT+GR + + L EE+ +V + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAQPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLTDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K + + ++ +K+ E F +Q Q + KMGP+ Q+ M+PG ++
Sbjct: 301 MLSLIEKAQQDYDAKEAKKVAEKMRENTFDFNDFVDQLQQVQKMGPLDQIMKMIPGMANN 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M+
Sbjct: 361 PQLKNLSVD-QKQIDHTEAIVYSMTEEE--RENPDILNPSRRRRIAAGSGRPVVEVNRMI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALS 447
+++K++ ++ SK+ KG M LS
Sbjct: 418 KQFKQMRELMSKV------TKGNMKGLS 439
>gi|288817542|ref|YP_003431889.1| signal recognition particle GTPase [Hydrogenobacter thermophilus
TK-6]
gi|384128308|ref|YP_005510921.1| signal recognition particle protein [Hydrogenobacter thermophilus
TK-6]
gi|288786941|dbj|BAI68688.1| signal recognition particle GTPase [Hydrogenobacter thermophilus
TK-6]
gi|308751145|gb|ADO44628.1| signal recognition particle protein [Hydrogenobacter thermophilus
TK-6]
Length = 436
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 249/430 (57%), Gaps = 12/430 (2%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
S+++ ++ + EK +N+ L +I ALL+ADV + +V+ ++ +D+ +
Sbjct: 10 SKSLSKLRGVRKLTEKQVNDILRDIRMALLEADVDYDVVKSFLKKVRDRAINEDIKNKLS 69
Query: 71 KRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGW 130
+ ++ EL +L K K V++FVGLQG+GKTTT K A + + + +
Sbjct: 70 PADSVVLTVYEELTSILGGEKADL-----KRGVVIFVGLQGTGKTTTIGKLANFLKNQSF 124
Query: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVD 190
K A+ D R A QL++ A K +P+Y S+ E+ PV IA + +E KKE D +++D
Sbjct: 125 KVAVSSTDVRRPAAMLQLQRLAEKVGVPYY-SFDEASPVEIATKALERAKKEGVDYLLID 183
Query: 191 TSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKM 250
T+GR + L EE++++ EA P VI+V D+ GQ A +AF +S+++ VI+TKM
Sbjct: 184 TAGRLHIDEELMEELKRIKEAVKPSEVIYVADAMQGQEALRALKAFHESITLTGVILTKM 243
Query: 251 DGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV 310
DG A+GG ALS A P+ F+G GE +++ E+F R+LG+GD ++K ++
Sbjct: 244 DGDARGGVALSVKEAIGVPIKFVGVGEKLEDIEIFYPDRIAQRILGLGDLQSLIEKAQQI 303
Query: 311 VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQ 370
+P D+ L ++ G F L M +Q + I MGP+ ++ M+PG S+EL K +
Sbjct: 304 IPEDEAQVLATRIMMGEFDLEDMLKQIRFIKSMGPLEKILGMIPGVSAEL---KNLKIDE 360
Query: 371 AKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWS 430
K K+ ++ SMT EE NPK++N SR +RIA+GSG V +V ++L+EY+ + K+
Sbjct: 361 KKFKKTEAIILSMTKEE--RRNPKIINMSRKVRIAKGSGTSVGDVNKVLKEYEEMKKMIK 418
Query: 431 KMKGLK-IPK 439
++KG++ IPK
Sbjct: 419 RLKGMQGIPK 428
>gi|403514808|ref|YP_006655628.1| signal recognition particle protein [Lactobacillus helveticus
R0052]
gi|403080246|gb|AFR21824.1| signal recognition particle protein [Lactobacillus helveticus
R0052]
Length = 476
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/448 (34%), Positives = 244/448 (54%), Gaps = 10/448 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P + E D +I +G+
Sbjct: 121 LAYHLQKTQKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +++DT+GR + + L EE+ +V + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAQPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + ++F SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDIFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K + + ++ +K+ E F +Q + + KMGP+ Q+ M+PG ++
Sbjct: 301 MLSLIEKAQQDYDAKEAEKVAEKMRENTFDFNDFVDQLKQVQKMGPLDQIMKMIPGMANN 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
K + Q +I + ++ SMT E + +P L+N SR RIA GSGR V EV M+
Sbjct: 361 PQLKNLNVD-QKQIDHTIAIVYSMT--EAEREDPDLLNPSRRRRIAAGSGRPVVEVNRMI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALS 447
+++K++ + SKM KG M LS
Sbjct: 418 KQFKQMRDMMSKM------TKGNMKGLS 439
>gi|161507707|ref|YP_001577663.1| Signal recognition protein Ffh [Lactobacillus helveticus DPC 4571]
gi|260101393|ref|ZP_05751630.1| signal recognition particle protein [Lactobacillus helveticus DSM
20075]
gi|417008883|ref|ZP_11945704.1| signal recognition particle protein [Lactobacillus helveticus MTCC
5463]
gi|160348696|gb|ABX27370.1| Signal recognition protein Ffh [Lactobacillus helveticus DPC 4571]
gi|260084804|gb|EEW68924.1| signal recognition particle protein [Lactobacillus helveticus DSM
20075]
gi|328465660|gb|EGF36877.1| signal recognition particle protein [Lactobacillus helveticus MTCC
5463]
Length = 476
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/448 (34%), Positives = 244/448 (54%), Gaps = 10/448 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P + E D +I +G+
Sbjct: 121 LAYHLQKTQKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +++DT+GR + + L EE+ +V + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAQPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + ++F SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDIFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K + + ++ +K+ E F +Q + + KMGP+ Q+ M+PG ++
Sbjct: 301 MLSLIEKAQQDYDAKEAEKVAEKMRENTFDFNDFVDQMKQVQKMGPLDQIMKMIPGMANN 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
K + Q +I + ++ SMT E + +P L+N SR RIA GSGR V EV M+
Sbjct: 361 PQLKNLNVD-QKQIDHTIAIVYSMT--EAEREDPDLLNPSRRRRIAAGSGRPVVEVNRMI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALS 447
+++K++ + SKM KG M LS
Sbjct: 418 KQFKQMRDMMSKM------TKGNMKGLS 439
>gi|385813594|ref|YP_005849987.1| Signal recognition protein Ffh [Lactobacillus helveticus H10]
gi|323466313|gb|ADX70000.1| Signal recognition protein Ffh [Lactobacillus helveticus H10]
Length = 476
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/448 (34%), Positives = 244/448 (54%), Gaps = 10/448 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P + E D +I +G+
Sbjct: 121 LAYHLQKTQKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSKDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +++DT+GR + + L EE+ +V + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAQPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + ++F SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDIFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K + + ++ +K+ E F +Q + + KMGP+ Q+ M+PG ++
Sbjct: 301 MLSLIEKAQQDYDAKEVEKVAEKMRENTFDFNDFVDQMKQVQKMGPLDQIMKMIPGMANN 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
K + Q +I + ++ SMT E + +P L+N SR RIA GSGR V EV M+
Sbjct: 361 PQLKNLNVD-QKQIDHTIAIVYSMT--EAEREDPDLLNPSRRRRIAAGSGRPVVEVNRMI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALS 447
+++K++ + SKM KG M LS
Sbjct: 418 KQFKQMRDMMSKM------TKGNMKGLS 439
>gi|167043737|gb|ABZ08429.1| putative SRP54-type protein, GTPase domain protein [uncultured
marine crenarchaeote HF4000_APKG3B16]
Length = 441
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 155/433 (35%), Positives = 259/433 (59%), Gaps = 5/433 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ AI+++ N++ +DE+++ E ++ R+LLQ+DV KLV E+ NI+
Sbjct: 1 MLDNLKSSLRAAIKKIVNSSGVDEELIKELSKDVQRSLLQSDVNVKLVFEITKNIESRSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +++ I + +++EL K+L F K GK + ++ +G+QGSGKTT +K
Sbjct: 61 NEKPPPGLSRKDHIVKILYDELAKLL-GNDTEFHFKSGKINKVLLLGIQGSGKTTVASKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + K+G++ ++ ADTFR GA QL+ K+ + YG D ++ G++ F+
Sbjct: 120 ARFLSKQGYRVGVIGADTFRPGALVQLRTMCEKSDVEVYGDEKNKDSPQVVKNGLKHFES 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
N D+I++DT+GRHK+E L +EM+Q+++A +PDL + V+D +IGQ QA+AF + V
Sbjct: 180 SNLDIILIDTAGRHKEEKDLLDEMKQINKAASPDLALLVVDGTIGQQCHAQAEAFHKIVP 239
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG +I+TK+D AKGGGAL+A AAT + V++IGTGE +D+ E F FV RLLGMGD
Sbjct: 240 VGGIIITKLDSSAKGGGALAASAATGAQVMYIGTGERIDDLETFSPTRFVGRLLGMGDIQ 299
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
+D + + + + ++++S G + Y Q + + K+G + +PG S ++
Sbjct: 300 AVLD-LAKRLENEADDVRMKRISSGKMNMEDFYYQLEEVTKVGSFQGLLDSMPGLSG-MV 357
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
+ + + + KI ++ ++ SM E ++P L+N SR+ RIARGSG EV E+++
Sbjct: 358 KEDQLDKMEEKIDKWRYIIQSMNQAE--KADPDLLNASRVKRIARGSGWPEHEVKELIKN 415
Query: 422 YKRLAKIWSKMKG 434
YK + KG
Sbjct: 416 YKNSKNMMKASKG 428
>gi|183230399|ref|XP_001913435.1| signal recognition particle 54 kDa protein [Entamoeba histolytica
HM-1:IMSS]
gi|169802916|gb|EDS89786.1| signal recognition particle 54 kDa protein, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 259
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 170/224 (75%)
Query: 17 MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQ 76
M+++T++DE+V+N L EI +LL DV +R+M NIKK +N +D+ G +KR++I+
Sbjct: 1 MTSSTVVDEEVINTLLKEIETSLLGEDVNPIFIRQMVNNIKKKINSEDIPDGIDKRKLIK 60
Query: 77 QAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVC 136
++F EL ++DP +F PKKGK V+M VGLQG+GKTTT TK A Y++ +G+KPA+V
Sbjct: 61 DSVFEELINLVDPKTEAFKPKKGKTCVLMMVGLQGAGKTTTITKLALYYKNRGYKPAVVG 120
Query: 137 ADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK 196
ADTFRAGA++QL+ NA +A +PF+G ESDPV++A EGV TF+KE D+I+VDTSGRHK
Sbjct: 121 ADTFRAGAYEQLQMNAKRAGVPFFGIKEESDPVKVASEGVRTFRKEKNDIILVDTSGRHK 180
Query: 197 QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Q+ LF+EM+ V +A PD +IFVMD +IGQAAF QA+AFK +V
Sbjct: 181 QDKELFKEMQSVRDAIKPDSIIFVMDGAIGQAAFGQAKAFKDAV 224
>gi|296139328|ref|YP_003646571.1| signal recognition particle protein [Tsukamurella paurometabola DSM
20162]
gi|296027462|gb|ADG78232.1| signal recognition particle protein [Tsukamurella paurometabola DSM
20162]
Length = 522
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/453 (35%), Positives = 245/453 (54%), Gaps = 29/453 (6%)
Query: 5 QLGGSIS--RAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNL 62
+LGG++S R ++++A I + EI ALL+ADV +VR + IK+
Sbjct: 8 RLGGALSGLRGKGRLTDADI------DATAREIRLALLEADVALPVVRAFVSRIKERAKG 61
Query: 63 DDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYA 122
+++A N + I + + EL +L K P+VIM GLQG+GKTT K A
Sbjct: 62 AEVSAALNPAQQIVKIVNEELVGILGGETRRINLAKTPPTVIMLAGLQGAGKTTLAGKLA 121
Query: 123 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY-------------TESDPV 169
++ +K+G P LV D R GA DQLK +A +P Y + + +DPV
Sbjct: 122 HHLKKQGHTPMLVACDLQRPGAVDQLKIVGERAGVPTYAPHPGTSVGGEGTLGVSAADPV 181
Query: 170 RIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAA 229
+A G+E K + D++IVDT+GR + L + R + +A +PD V+FV+D+ IGQ A
Sbjct: 182 EVARGGIEEAKAKQHDVVIVDTAGRLGIDEELMGQARAIRDAVDPDEVLFVLDAMIGQDA 241
Query: 230 FDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289
AQAF + V V++TK+DG A+GG ALS T P++F TGE +D+F+VF
Sbjct: 242 VTTAQAFAEGVDFTGVVLTKLDGDARGGAALSVREITGKPILFASTGEKLDDFDVFHPDR 301
Query: 290 FVSRLLGMGDWSGFMDKIHEVVPMDQQ--PELLQKLSEGNFTLRIMYEQFQNILKMGPIG 347
SR+LGMGD +++ +V MDQQ E K++ G TL +Q I KMGPIG
Sbjct: 302 MSSRILGMGDVLTLIEQAEQV--MDQQKAEEAAAKITSGELTLEDFLDQMLMIRKMGPIG 359
Query: 348 QVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARG 407
+ MLPG M +++ R ++ MT E ++PK++N SR +RIA+G
Sbjct: 360 NLLGMLPGAGQ--MKDALAAVDDSQLDRIQAIIRGMTPAE--RADPKIINASRRLRIAKG 415
Query: 408 SGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKK 440
SG V +V ++++ + K+ S+M G PK+
Sbjct: 416 SGVAVSDVNQLVDRFFEARKMMSQMAGFGAPKR 448
>gi|295425198|ref|ZP_06817901.1| signal recognition particle protein [Lactobacillus amylolyticus DSM
11664]
gi|295064974|gb|EFG55879.1| signal recognition particle protein [Lactobacillus amylolyticus DSM
11664]
Length = 476
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 240/448 (53%), Gaps = 10/448 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ I E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKISEEDINKASREIRLALLEADVNFKVVKDFIKKIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGETAVGLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQLKVPVYSEADEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +I+DT+GR + + L EE+ ++ + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVIIDTAGRLEIDEPLMEELERIKKVAQPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P+I+ G GE + + E F SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPIIYTGQGEKLTDLEDFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K + + ++ K+ E F +Q + + KMGP+ Q+ M+PG ++
Sbjct: 301 MLTLIEKAQQDYDQKEAEKVAMKMKENTFDFNDFIDQLEQVQKMGPLDQIMKMIPGMANN 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
K + + +I ++ SMT EE +P ++N SR RIA GSGR V EV M+
Sbjct: 361 PQLKNLSIDDK-QIAHTKAIVYSMTEEE--REDPDILNPSRRRRIAAGSGRPVVEVNRMI 417
Query: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALS 447
+++K+ + SK+ KG M LS
Sbjct: 418 KQFKQARDMMSKI------TKGNMKGLS 439
>gi|295696070|ref|YP_003589308.1| signal recognition particle protein [Kyrpidia tusciae DSM 2912]
gi|295411672|gb|ADG06164.1| signal recognition particle protein [Kyrpidia tusciae DSM 2912]
Length = 445
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 243/430 (56%), Gaps = 4/430 (0%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L G + A ++ + + E ++E + E+ RALL ADV F +VR+ +++ ++
Sbjct: 7 LAGRLQEAFARLKSKGKLSEADVDEAMKEVRRALLAADVNFTVVRDFVARVRERAVGQEV 66
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
+ + + + +EL +L GKPS G+P+V+M VGLQG+GKTTT K A +
Sbjct: 67 MKSLTPAQQVIKIVHDELTALLG-GKPSTLNLSGRPAVVMLVGLQGAGKTTTAGKLAQWV 125
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
+K+G +P LV AD +R A QL+ K+P + ++DPV I+ +E +E CD
Sbjct: 126 RKQGRRPLLVAADVYRPAAVRQLQTLGEALKVPVFSVDGDADPVEISKSSLERASQEGCD 185
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
+++VDT+GR + AL EE+ ++ A P ++ V+D+ GQ+A + A+AF + +
Sbjct: 186 VVLVDTAGRLHVDDALMEELERMKAAVVPGEILLVVDAMTGQSAVEVAEAFHGRLGLTGA 245
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I TK+DG KGG ALS ++ P+ F G GE +D E F SR+LGMGD ++
Sbjct: 246 IFTKLDGDTKGGAALSILSVAGCPIKFAGVGEKLDALEPFYPDRMASRILGMGDVLTLIE 305
Query: 306 KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGR 365
K + V ++ +L ++L G F+L +Q + + K+GP+ Q+ MLPG +++ G
Sbjct: 306 KAQQTVDAEKAKQLERQLRAGEFSLEDFLDQLRQVRKLGPLDQLLGMLPGM-NKIKGLGN 364
Query: 366 EKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRL 425
+ + ++ R ++ SMT EE P+L++ SR RIA GSG +V +V +L+++K +
Sbjct: 365 LQVDERQLGRVEAIILSMTPEE--RRRPELIDASRRRRIASGSGTRVEDVGRLLKQFKEM 422
Query: 426 AKIWSKMKGL 435
K+ + G+
Sbjct: 423 RKMMKQFSGM 432
>gi|374296102|ref|YP_005046293.1| signal recognition particle protein [Clostridium clariflavum DSM
19732]
gi|359825596|gb|AEV68369.1| signal recognition particle protein [Clostridium clariflavum DSM
19732]
Length = 450
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 154/445 (34%), Positives = 251/445 (56%), Gaps = 9/445 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNI-KKI 59
MV L + A++++ + EK + E + EI ALL+ADV FK+V++ + ++
Sbjct: 1 MVFEGLSNKLQEAVRKLKGKGRVTEKDVKEMMREIKLALLEADVNFKVVKDFIAKVSERA 60
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPG--KPSFTPKKGKPSVIMFVGLQGSGKTTT 117
V D L + +++I+ + EL ++ PG K F PK P+V M VGLQGSGKTTT
Sbjct: 61 VGQDVLESLTPGQQVIK-IVHEELINLMGPGQSKLVFAPKP--PTVYMMVGLQGSGKTTT 117
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
K A +K+G KP LV D +R A QL+ + + + +++P+ IA +E
Sbjct: 118 SGKLANLLRKQGKKPLLVACDVYRPAAIKQLQVVGGQLGVDVFSMGDKTNPIDIAKAAIE 177
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
K + DL+I+DT+GR + AL +E++ + E+ P ++ V+DS GQ A + ++ F
Sbjct: 178 HAKSKQYDLVIIDTAGRLHIDEALMDELKNIKESVRPTEILLVVDSMTGQDAVNVSETFN 237
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+ + + VI+TK+DG +GG ALS T P+ FIG GE +++ E F SR+LGM
Sbjct: 238 EKLGIDGVILTKLDGDTRGGAALSVKTVTGKPIKFIGMGEKLNDLEPFFPDRMASRILGM 297
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 357
GD ++K E + EL +K+ FTL EQ Q I KMGP+ ++ M+PG +
Sbjct: 298 GDVLSLIEKAQEAFDEKKALELERKMRTQQFTLEDFLEQMQQIKKMGPLNKILGMIPGIN 357
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
+E + +S+ ++ R+ ++ SMT +E ++P ++N SR RIA GSG +V++V +
Sbjct: 358 AEALNAINTADSEKELARFEAIIKSMTKQE--RNDPSIINGSRRKRIAAGSGTKVQDVNK 415
Query: 418 MLEEYKRLAKIWSKMKGL-KIPKKG 441
+L+ ++ + K+ M L K KKG
Sbjct: 416 VLKSFEEMKKMMKLMNDLGKHGKKG 440
>gi|161528039|ref|YP_001581865.1| GTP-binding signal recognition particle [Nitrosopumilus maritimus
SCM1]
gi|160339340|gb|ABX12427.1| GTP-binding signal recognition particle SRP54 G- domain
[Nitrosopumilus maritimus SCM1]
Length = 442
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 154/434 (35%), Positives = 262/434 (60%), Gaps = 6/434 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ AI+++ ++ IDE+++ E ++ RALLQ+DV +LV E+ ++++
Sbjct: 1 MLDGLKSSLGDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLEITKHLEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +++ I + +++EL +L + F K GK + I+ +G+QGSGKTT +K
Sbjct: 61 NETPPPGLSRKNHIVKILYDELSNLL-GNESEFDFKPGKQNKIILLGIQGSGKTTVASKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + +G+K +V ADT+R GA QLK K+ + YG + D I G+ FK
Sbjct: 120 AKFLTGQGYKVGVVGADTYRPGALVQLKTMCEKSNVEVYGEESNKDSPSIVKNGLNYFKD 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
++ D+I++DT+GRHK+E L EEM ++++ +PDL + V+D +IGQ F+QA+AF +++
Sbjct: 180 QSLDVILIDTAGRHKEEQDLLEEMDRINKVADPDLALLVIDGTIGQQCFNQAEAFHKTIP 239
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG VI+TK+D AKGGGAL+A AAT + +++IGTGE +D+ E F FV RLLGMGD
Sbjct: 240 VGGVIITKLDSSAKGGGALAASAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGDVQ 299
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
+D + + + + + ++++S G + Q + + KMG + + +PG S ++
Sbjct: 300 AVLD-LAKRLESENDDDRMKRISSGKMNMEDFLSQLEEVTKMGSLQGILESMPGLSG-MV 357
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPK-LMNDSRIMRIARGSGRQVREVMEMLE 420
+ + + ++ ++ ++ SMT +E ++P+ L+N SRI RIARGSG EV E+++
Sbjct: 358 KDDQVNQMEDRVTKWRYIIQSMTTQE--KADPEGLLNSSRIKRIARGSGWPEGEVKELMK 415
Query: 421 EYKRLAKIWSKMKG 434
YK + KG
Sbjct: 416 NYKNSKNMMKASKG 429
>gi|78188776|ref|YP_379114.1| Signal recognition particle protein [Chlorobium chlorochromatii
CaD3]
gi|78170975|gb|ABB28071.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
chlorochromatii CaD3]
Length = 451
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 254/432 (58%), Gaps = 12/432 (2%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L + ++++ I+E + + +I RALL ADV +K+ +++ +I++ +++
Sbjct: 7 LSDKLEATFKKLAGQATINEINIGVAMRDIKRALLAADVNYKVAKKLIEDIREKSLGEEV 66
Query: 66 AAGHNKRRIIQQAIFNELCKMLD-PGKP-SFTPKKGKPSVIMFVGLQGSGKTTTCTKYAY 123
+ ++I + +++EL +++ KP + +PKK P++IM GLQGSGKTT C K A
Sbjct: 67 IKSVSPAQMIVKIVYDELTELMGGEQKPLNLSPKK-LPAIIMVAGLQGSGKTTFCAKLAL 125
Query: 124 YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKEN 183
+K G P L+ AD +R A DQLK + ++P + S E D ++ A++G+E K
Sbjct: 126 RLRKNGKNPMLIAADVYRPAAVDQLKALGEQVEVPVF-SVDEKDAMKAALQGLEAAKAAA 184
Query: 184 CDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVG 243
D++IVDT+GR + + A+ E + A PD ++FV+DS +GQ A + A+AF +
Sbjct: 185 KDVVIVDTAGRLQIDQAMMAEAEALKNALKPDELLFVVDSMMGQEAVNTAKAFNDRLDFD 244
Query: 244 AVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGF 303
V++TK+DG A+GG ALS + P+ FI GE +D+ ++F R+LGMGD F
Sbjct: 245 GVVLTKLDGDARGGAALSIRQVVEKPIKFISIGEKVDDLDIFYPDRMAQRILGMGDIISF 304
Query: 304 MDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPK 363
++K E + +D+ E+ +KL + F L ++Q Q + KMG I + M+PG ++++PK
Sbjct: 305 VEKAQENLDLDKAIEMQKKLMKNEFDLNDFFDQLQQLKKMGSIQGLIEMVPGL-NKMVPK 363
Query: 364 GREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY- 422
++ K M+ SMT EE SNP+++N SR RIARGSGR+V+EV +L+++
Sbjct: 364 --QELENLDFKPIEAMISSMTKEE--RSNPEMINGSRRQRIARGSGRKVQEVNLLLKQFG 419
Query: 423 --KRLAKIWSKM 432
K++ K SK+
Sbjct: 420 EMKKMMKAVSKL 431
>gi|386875341|ref|ZP_10117516.1| signal peptide binding domain protein [Candidatus Nitrosopumilus
salaria BD31]
gi|386806843|gb|EIJ66287.1| signal peptide binding domain protein [Candidatus Nitrosopumilus
salaria BD31]
Length = 441
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 151/433 (34%), Positives = 262/433 (60%), Gaps = 5/433 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+S AI+++ ++ IDE+++ E ++ RALLQ+DV +LV ++ ++++
Sbjct: 1 MLDGLKNSLSDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLDITKHLEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +++ I + +++EL K+L + F K G + I+ +G+QGSGKTT +K
Sbjct: 61 NEIPPPGLSRKDHIIKILYDELSKLL-GNESDFNFKPGTQNKIILLGIQGSGKTTVASKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + ++G+K ++ ADT+R GA QLK K+ + YG + D I G++ F+
Sbjct: 120 AKFLSRQGYKVGVIGADTYRPGALVQLKTMCEKSNVEVYGEESNKDSPNIVKNGLKHFEG 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ D+I++DT+GRHK+E L EEM ++++ +PDL + V+D +IGQ F+QA+AF ++
Sbjct: 180 QPLDVILIDTAGRHKEEKDLLEEMERINKVADPDLALLVIDGTIGQQCFNQAEAFHNTIP 239
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG +I+TK+D AKGGGAL+A AAT + +++IGTGE +D+ E F FV RLLGMGD
Sbjct: 240 VGGIIITKLDSSAKGGGALAASAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGDIQ 299
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
+D + + + + ++++S G + + Q + + K+G + + +PG S ++
Sbjct: 300 AVLD-LAKRLENEGDDVRMKRISSGKMNMDDFFYQLEEVTKVGSLKGLLDSMPGLSG-MV 357
Query: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
+ + + ++ ++ ++ SMT EE ++P L+N SRI RIARGSG EV E+++
Sbjct: 358 KNDQVDQMEDRVSKWRYIIQSMTKEE--KADPDLLNSSRIKRIARGSGWPEGEVKELVKN 415
Query: 422 YKRLAKIWSKMKG 434
YK + KG
Sbjct: 416 YKNSKNMMKASKG 428
>gi|407464403|ref|YP_006775285.1| GTP-binding signal recognition particle [Candidatus Nitrosopumilus
sp. AR2]
gi|407047591|gb|AFS82343.1| GTP-binding signal recognition particle [Candidatus Nitrosopumilus
sp. AR2]
Length = 441
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 155/434 (35%), Positives = 261/434 (60%), Gaps = 7/434 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ AI+++ ++ IDE+++ E ++ RALLQ+DV +LV E+ ++++
Sbjct: 1 MLDGLKNSLGDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLEITKHLEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +++ I + +++EL K+L + F K GK + I+ +G+QGSGKTT +K
Sbjct: 61 NETPPPGLSRKDHIVKILYDELSKLLG-NESEFDFKPGKQNKIILLGIQGSGKTTVASKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + ++G+K +V ADT+R GA QLK K+ + YG D I G++ F
Sbjct: 120 AKFLTRQGYKVGVVGADTYRPGALVQLKTMCEKSNVEVYGEENNKDSPSIVKNGLKHFAG 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ D+I++DT+GRHK+E L EEM ++++ +PDL + V+D +IGQ F+QA+AF +++
Sbjct: 180 QPLDVILIDTAGRHKEEKDLLEEMDRINKVADPDLALLVIDGTIGQQCFNQAEAFHKTIP 239
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG VI+TK+D AKGGGAL+A AAT + +++IGTGE +D+ E F FV RLLGMGD
Sbjct: 240 VGGVIITKLDSSAKGGGALAASAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGDIQ 299
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
+D + + + + ++++S G + + Q + + K+G + + +PG S M
Sbjct: 300 AVLD-LAKRLENEGDDVRMKRISSGKMNMDDFFYQLEEVTKVGSLQGLLDSMPGLSG--M 356
Query: 362 PKGRE-KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
KG + + + ++ ++ ++ SMT E ++P L+N SRI RI+RGSG EV E+++
Sbjct: 357 VKGDQVNQMEGRVSKWRYIIQSMTKAE--KADPDLLNSSRIKRISRGSGWPEGEVKELIK 414
Query: 421 EYKRLAKIWSKMKG 434
YK + KG
Sbjct: 415 NYKNSKNMMKASKG 428
>gi|402818507|ref|ZP_10868090.1| signal recognition particle protein Ffh [Paenibacillus alvei DSM
29]
gi|402503973|gb|EJW14505.1| signal recognition particle protein Ffh [Paenibacillus alvei DSM
29]
Length = 460
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 227/420 (54%), Gaps = 6/420 (1%)
Query: 23 IDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNE 82
+ E +NE + E+ ALL+ADV FK+V+E +K+ ++ +I + E
Sbjct: 23 VSEDDVNEAMREVRLALLEADVNFKVVKEFIGKVKEKAVGQEVMQSFTPGMVIIDIVNKE 82
Query: 83 LCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRA 142
L +++ P+VIM VGLQG+GKTTT K A QK+ KP LV AD +R
Sbjct: 83 LTELMGGTAAKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKMLQKQNHKPLLVAADIYRP 142
Query: 143 GAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALF 202
A QL+ + K+P + + PV IA G+E K+ + D +I+DT+GR + AL
Sbjct: 143 AAIKQLQVVGEQIKVPVFALGDQVSPVEIARRGLEHAKENHLDYVIIDTAGRLHIDEALM 202
Query: 203 EEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSA 262
EE++QV PD V+ V+D+ GQ A + A +F Q + + V++TK+DG +GG ALS
Sbjct: 203 EELKQVHATAKPDEVLLVVDAMTGQDAVNVADSFNQQLELTGVVLTKLDGDTRGGAALSV 262
Query: 263 VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQK 322
A T P+ F GE MD E F + SR+LGMGD ++K + ++ E+ K
Sbjct: 263 KAVTGCPIKFATLGEKMDALEPFHPERMASRILGMGDMLSLIEKAQANIDTEKAKEMEMK 322
Query: 323 LSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDS 382
+ FT EQ Q + K+GPI Q+ M+PG +++ K + ++ R ++ S
Sbjct: 323 MRNAAFTFDDFLEQMQQVKKLGPIDQILDMIPGM-NKMKQNANLKVDERQMGRIEAIVRS 381
Query: 383 MTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML---EEYKRLAKIWSKMKGLKIPK 439
MTNEE +P L+N SR RIA GSG + +V ++ +E +R+ K +S M G K PK
Sbjct: 382 MTNEE--RQDPDLINHSRRKRIAAGSGTALADVNRLIKQFDEMRRMMKQFSDMMGPKGPK 439
>gi|374603417|ref|ZP_09676397.1| signal recognition particle protein [Paenibacillus dendritiformis
C454]
gi|374391013|gb|EHQ62355.1| signal recognition particle protein [Paenibacillus dendritiformis
C454]
Length = 457
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 146/420 (34%), Positives = 229/420 (54%), Gaps = 6/420 (1%)
Query: 23 IDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNE 82
+ E +NE + E+ ALL+ADV FK+V+E +K+ ++ +I + E
Sbjct: 23 VTEDDVNEAMREVRLALLEADVNFKVVKEFINKVKEKAVGQEVMKSFTPGMVIVDIVNKE 82
Query: 83 LCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRA 142
L +++ P+VIM GLQG+GKTTT K A QK+ KP LV AD +R
Sbjct: 83 LTELMGGTAAKLAKANKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNHKPLLVAADIYRP 142
Query: 143 GAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALF 202
A QL+ + +P + + PV IA + +E + + D +IVDT+GR + AL
Sbjct: 143 AAIKQLEVLGAQINVPVFSLGDQVSPVEIARQAMEHARANHLDYVIVDTAGRLHIDEALM 202
Query: 203 EEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSA 262
EE++Q+ E NPD V+ V+D+ GQ A + A++F Q +++ V++TK+DG +GG ALS
Sbjct: 203 EELKQIHETVNPDEVLLVVDAMTGQDAVNVAESFNQQLALTGVVLTKLDGDTRGGAALSV 262
Query: 263 VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQK 322
A T P+ F GE +D E F + SR+LGMGD ++K + D+ E+ K
Sbjct: 263 KAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQANIDADKAKEMEMK 322
Query: 323 LSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDS 382
+ FT EQ Q + ++GPI Q+ M+PG +++ K + ++ R ++ S
Sbjct: 323 MRNAAFTFDDFLEQMQQVKQLGPIDQILDMIPGM-NKMKQTANLKVDERQMGRIEAIVRS 381
Query: 383 MTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML---EEYKRLAKIWSKMKGLKIPK 439
MTNEE +P L+N SR RIA GSG + +V ++ +E +R+ K +++M G K PK
Sbjct: 382 MTNEE--RQDPDLINHSRRKRIAAGSGTSLADVNRLIKQFDEMRRMMKQFTEMMGPKGPK 439
>gi|226313205|ref|YP_002773099.1| signal recognition particle protein fifty-four homolog
[Brevibacillus brevis NBRC 100599]
gi|226096153|dbj|BAH44595.1| signal recognition particle protein fifty-four homolog
[Brevibacillus brevis NBRC 100599]
Length = 470
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 140/434 (32%), Positives = 231/434 (53%), Gaps = 5/434 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A ++ IDE ++NE + E+ ALL+ADV FK+V++ +K+
Sbjct: 1 MAFESLANRLQNAFDKLRGRGKIDETIVNEAMREVRLALLEADVNFKVVKDFVARVKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ +++ + + EL ++ T P+VIM GLQG+GKTTT K
Sbjct: 61 VGQEVMKSLTPGQMVIKIVNEELVALMGGNVAQLTMAHRPPTVIMMAGLQGAGKTTTTGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QK+ KP LV D +R A QL+ + +P + + PV IA + +E K
Sbjct: 121 LAKYLQKQNRKPLLVAGDIYRPAAIKQLQVLGEQLNVPVFTLGDQVSPVEIARQAIEHAK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D++++DT+GR + AL +E++Q+ E T PD ++ V+D+ GQ A + A++F +
Sbjct: 181 TNHLDVVLIDTAGRLHIDEALMDELKQIREVTKPDEILLVVDAMTGQDAVNVAESFNSQL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG +GG ALS A T P+ F GE +D E F SR+LGMGD
Sbjct: 241 ELTGVVLTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
++K V D+ ++ +++ +G FT + + Q + +GP + MLPG +
Sbjct: 301 LSLIEKAQASVDEDKARDMERQMRQGEFTFDMFLDSMQQLRNLGPFEDILGMLPGMNKM- 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
KG+ + +I R + SMT +E +NP L+N SR RIA GSG ++EV L+
Sbjct: 360 --KGKMNVDEKQIARVEAIAKSMTKQE--RANPDLLNASRRKRIASGSGTSIQEVNRFLK 415
Query: 421 EYKRLAKIWSKMKG 434
+++ + K+ + G
Sbjct: 416 QFEEMKKMMKQFSG 429
>gi|395242479|ref|ZP_10419476.1| Signal recognition particle protein [Lactobacillus pasteurii CRBIP
24.76]
gi|394480211|emb|CCI85716.1| Signal recognition particle protein [Lactobacillus pasteurii CRBIP
24.76]
Length = 476
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 147/434 (33%), Positives = 238/434 (54%), Gaps = 6/434 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ I E+ +N EI ALL+ADV FK+V++ IK+
Sbjct: 1 MAFENLSERIQKALKNLTGKGKISEEDINTASREIRLALLEADVNFKVVKDFIKKIKQEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +EL KM+ T K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNDELTKMMGESSVKLTKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + ++P + E D +I EG+
Sbjct: 121 LAYHLQKTEHARPLLIAGDIYRPAAIDQLKQIGEQLEVPVFSKPDEKDVAKIVEEGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +I+DT+GR + + L +E+ +V P+ ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVIIDTAGRLEIDEKLMDELERVKAVAKPENILLVVDAMTGQAATDVARGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P+I+ G GE + + E F SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPIIYTGQGEKLTDLEDFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K + + + ++ +K+ E F +Q + + K+GP+ Q+ M+PG ++
Sbjct: 301 VLTLIEKAQQDYDVKEAKKVAEKMRENTFDFNDFIDQLEQVQKLGPLDQIMKMIPGMANN 360
Query: 360 LMPKGREKE-SQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
P+ + + +I ++ SMT EE NP ++N SR RIA GSGR V EV M
Sbjct: 361 --PQLQNLSIDEKEIAHTKAIVYSMTEEE--RENPDILNPSRRRRIAAGSGRPVVEVNRM 416
Query: 419 LEEYKRLAKIWSKM 432
++++K+ + SK+
Sbjct: 417 IKQFKQARDLMSKI 430
>gi|398814569|ref|ZP_10573250.1| signal recognition particle protein [Brevibacillus sp. BC25]
gi|398036838|gb|EJL30047.1| signal recognition particle protein [Brevibacillus sp. BC25]
Length = 470
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/434 (32%), Positives = 231/434 (53%), Gaps = 5/434 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A ++ IDE ++NE + E+ ALL+ADV FK+V++ +K+
Sbjct: 1 MAFESLANRLQNAFDKLRGRGKIDETIVNEAMREVRLALLEADVNFKVVKDFVARVKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ +++ + + EL ++ T P+VIM GLQG+GKTTT K
Sbjct: 61 VGQEVMKSLTPGQMVIKIVNEELVALMGGNVAQLTMAHRPPTVIMMAGLQGAGKTTTTGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QK+ KP LV D +R A QL+ + +P + + PV IA + +E K
Sbjct: 121 LAKYLQKQNRKPLLVAGDIYRPAAIKQLQVLGDQLNVPVFTLGDQVSPVEIARQAIEHAK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D++++DT+GR + AL +E++Q+ E T PD ++ V+DS GQ A + A++F +
Sbjct: 181 TNHLDVVLIDTAGRLHIDEALMDELKQIREVTKPDEILLVVDSMTGQDAVNVAESFNSQL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG +GG ALS A T P+ F GE +D E F SR+LGMGD
Sbjct: 241 ELTGVVLTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
++K V D+ ++ +++ +G FT + + Q + +GP + MLPG +
Sbjct: 301 LSLIEKAQASVDEDKARDMERQMRQGEFTFDMFLDSMQQLRNLGPFEDILGMLPGMNKM- 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
KG+ + +I R + SMT +E +NP L+N +R RIA GSG ++EV L+
Sbjct: 360 --KGKMNVDEKQIARVEAIAKSMTKQE--RANPDLLNANRRKRIASGSGTSIQEVNRFLK 415
Query: 421 EYKRLAKIWSKMKG 434
+++ + K+ + G
Sbjct: 416 QFEEMKKMMKQFSG 429
>gi|407462068|ref|YP_006773385.1| GTP-binding signal recognition particle [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045690|gb|AFS80443.1| GTP-binding signal recognition particle [Candidatus Nitrosopumilus
koreensis AR1]
Length = 441
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/434 (35%), Positives = 262/434 (60%), Gaps = 7/434 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ AI+++ ++ IDE+++ E ++ RALLQ+DV +LV E+ ++++
Sbjct: 1 MLDGLKSSLGDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLEITKHLEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +++ I + +++EL +L + F K GK + I+ +G+QGSGKTT +K
Sbjct: 61 NETPPPGLSRKDHIVKILYDELSSLLG-NESEFDFKPGKQNKIILLGIQGSGKTTVASKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + ++G+K ++ ADT+R GA QLK K+ + YG D I G++ ++
Sbjct: 120 AKFLTRQGYKVGVIGADTYRPGALVQLKTMCEKSNVEVYGEENNKDSPSIVKNGLKHYEG 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ D+I++DT+GRHK+E L EEM ++++ +PDL + V+D +IGQ F+QA+AF +++
Sbjct: 180 QPLDVILIDTAGRHKEEQDLLEEMDRINKIADPDLALLVIDGTIGQQCFNQAEAFHKTIP 239
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG VI+TK+D AKGGGAL+A AAT + +++IGTGE +D+ E F FV RLLGMGD
Sbjct: 240 VGGVIITKLDSSAKGGGALAASAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGDVQ 299
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 361
+D + + + + ++++S G + + Q + + K+G + + +PG S M
Sbjct: 300 AVLD-LAKRLENEGDDVRMKRISSGKMNMDDFFYQLEEVTKVGSLQGLLESMPGLSG--M 356
Query: 362 PKGRE-KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
KG + + + ++ ++ ++ SMT EE ++P L+N SRI RIARGSG EV E+++
Sbjct: 357 VKGDQVNQMEDRVSKWRYIIQSMTKEE--KADPDLLNSSRIKRIARGSGWPEGEVKELIK 414
Query: 421 EYKRLAKIWSKMKG 434
YK + KG
Sbjct: 415 NYKNSKNMMKASKG 428
>gi|125973288|ref|YP_001037198.1| signal recognition particle subunit FFH/SRP54 (srp54) [Clostridium
thermocellum ATCC 27405]
gi|256003768|ref|ZP_05428756.1| signal recognition particle protein [Clostridium thermocellum DSM
2360]
gi|281417492|ref|ZP_06248512.1| signal recognition particle protein [Clostridium thermocellum JW20]
gi|385778800|ref|YP_005687965.1| signal recognition particle protein [Clostridium thermocellum DSM
1313]
gi|419723183|ref|ZP_14250318.1| signal recognition particle protein [Clostridium thermocellum AD2]
gi|419724913|ref|ZP_14251968.1| signal recognition particle protein [Clostridium thermocellum YS]
gi|125713513|gb|ABN52005.1| signal recognition particle protein [Clostridium thermocellum ATCC
27405]
gi|255992329|gb|EEU02423.1| signal recognition particle protein [Clostridium thermocellum DSM
2360]
gi|281408894|gb|EFB39152.1| signal recognition particle protein [Clostridium thermocellum JW20]
gi|316940480|gb|ADU74514.1| signal recognition particle protein [Clostridium thermocellum DSM
1313]
gi|380771533|gb|EIC05398.1| signal recognition particle protein [Clostridium thermocellum YS]
gi|380780950|gb|EIC10613.1| signal recognition particle protein [Clostridium thermocellum AD2]
Length = 446
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/423 (36%), Positives = 232/423 (54%), Gaps = 12/423 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNI-KKI 59
M+ L G + A++++ + EK + E + EI ALL+ADV FK+V++ + ++
Sbjct: 1 MLFEGLSGKLQEAMKKLRGKGRVTEKDVKEMMREIKLALLEADVNFKVVKDFIGKVSERA 60
Query: 60 VN---LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
V L+ L G +I+ + EL ++ T P++ M VGLQGSGKTT
Sbjct: 61 VGQEVLESLTPGQQVIKIVHE----ELINLMGSANSKVTFSSKPPTIYMMVGLQGSGKTT 116
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
T K A +K+G KP LV D +R A QL+ ++ I + +++PV IA V
Sbjct: 117 TSGKLANLLRKQGKKPLLVACDVYRPAAIKQLQVVGSQLGIEVFSMGDKTNPVDIAKAAV 176
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
E K DL+I+DT+GR L EE++ + EA P ++ V+DS GQ A + A++F
Sbjct: 177 EYAKSRQYDLVIIDTAGRLHINEELMEELQNIKEAVRPQEILLVVDSMTGQDAVNVAESF 236
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
+ + V +I+TK+DG +GG ALS A T P+ FIG GE +++ E F SR+LG
Sbjct: 237 NEKLGVDGIILTKLDGDTRGGAALSVKAVTGKPIKFIGMGEKLNDIEPFFPDRMASRILG 296
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 356
MGD ++K E + EL +K+ FTL EQ Q I KMGP+ Q+ +M+PGF
Sbjct: 297 MGDVLSLIEKAQEAFDEKKALELEKKMRTQQFTLEDFLEQMQQIKKMGPLNQLLAMIPGF 356
Query: 357 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 416
++ +M E K+ R ++ SMT EE +NP ++N SR RIA GSG V+EV
Sbjct: 357 NANVMKDIELDEK--KMARVEAIIKSMTKEE--RNNPSIINGSRRKRIAAGSGTTVQEVN 412
Query: 417 EML 419
++L
Sbjct: 413 KLL 415
>gi|284047845|ref|YP_003398184.1| signal recognition particle protein [Acidaminococcus fermentans DSM
20731]
gi|283952066|gb|ADB46869.1| signal recognition particle protein [Acidaminococcus fermentans DSM
20731]
Length = 448
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 245/445 (55%), Gaps = 9/445 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L ++ AIQ++ + E+ L E L E+ ALL+ADV FK+V+E I++
Sbjct: 1 MAFEILTDKLTAAIQKLRGQKTVSEQDLKETLREVRLALLEADVNFKVVKEFTAKIRERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ + I + + EL ++L + P+VIM VGLQG+GKTTT K
Sbjct: 61 MGQQVDPNLTPGQYIVKIVHEELIELLGGTQSKLNVAANPPTVIMLVGLQGAGKTTTVGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +K G KP +V D +R A QL+ + +P + + PV IA E ++
Sbjct: 121 LANYLRKNGKKPLMVAGDVYRPAAITQLEVIGKQLDMPVFSMGDQVSPVEIARESLKRAN 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
CD +++DT+GR + L E++ + A NPD ++ V+D+ GQ A A +F +++
Sbjct: 181 ALLCDTVLIDTAGRLHVDETLMNELKDMKTAVNPDEILLVVDAMTGQDAVTVADSFNKAL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ +IVTK+DG A+GG LS A T PV F+G GE +D + F SR+LGMGD
Sbjct: 241 GITGLIVTKLDGDARGGAVLSVKAVTNCPVKFVGMGEKLDALQPFYPDRMASRILGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG---FS 357
++K E + +D ++ + L + FTL + +Q + + K+G + + SM+PG F+
Sbjct: 301 LSLIEKAQEAIDVDSAKKMAESLKKNEFTLDMFLDQMKQVKKLGSLESILSMIPGMGKFA 360
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
+L +G + + + +++R ++ SMT +E NP+++N SR RIA G G++V++V
Sbjct: 361 KQL--EGVDLDGK-EVRRLEAIIYSMTPQE--RQNPRIINGSRRKRIAAGCGQRVQDVNR 415
Query: 418 MLEEYKRLAKIWSKMKGL-KIPKKG 441
+L++++ K+ M+G+ K +KG
Sbjct: 416 LLKQFEESKKLMKTMQGMNKYARKG 440
>gi|224084412|ref|XP_002335343.1| predicted protein [Populus trichocarpa]
gi|222833644|gb|EEE72121.1| predicted protein [Populus trichocarpa]
Length = 144
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/143 (86%), Positives = 137/143 (95%)
Query: 352 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
MLPGFS+ELMPKG EKESQAKIKRYMTMMDSMTNEELDSSNPKL+NDSR+MRIARG+GR
Sbjct: 1 MLPGFSAELMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKLLNDSRMMRIARGAGRP 60
Query: 412 VREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVG 471
+R+VMEMLEEYKRLAK+WS+MKGLKIP+KGEMS+LSRNMNAQHM+KVLP MLKQ+GG+G
Sbjct: 61 IRDVMEMLEEYKRLAKVWSEMKGLKIPEKGEMSSLSRNMNAQHMNKVLPPQMLKQLGGMG 120
Query: 472 GLQNLMKQMGSTKDMMGMFGGGE 494
GLQNLMKQMGS KDM GMFGGG+
Sbjct: 121 GLQNLMKQMGSAKDMTGMFGGGD 143
>gi|338730579|ref|YP_004659971.1| signal recognition particle subunit FFH/SRP54 (srp54) [Thermotoga
thermarum DSM 5069]
gi|335364930|gb|AEH50875.1| signal recognition particle subunit FFH/SRP54 (srp54) [Thermotoga
thermarum DSM 5069]
Length = 433
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/439 (35%), Positives = 249/439 (56%), Gaps = 13/439 (2%)
Query: 5 QLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDD 64
+L +S+ + +S I EK + E + ++ +LL+ADV FK+V+E ++K ++
Sbjct: 4 RLQEKLSKIFRSLSGRGKITEKNIEEAVKQVKISLLEADVNFKVVKEFVESVKAKALGEE 63
Query: 65 LAAGHNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAY 123
+ + + I +EL +L G+ PS K P++IM VGLQGSGKTTT K A
Sbjct: 64 VLRSLTPDQQFIKIIRDELISIL--GRHPSTLNLKHHPAIIMIVGLQGSGKTTTAAKLAL 121
Query: 124 YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKEN 183
Y +K G P LV ADT+R A DQL++ IP + + +P++I E + K
Sbjct: 122 YLKKNGRNPILVAADTYRPAAIDQLEKLGKSINIPVF-TGDRKNPLKIVEEALSFAKNSQ 180
Query: 184 CDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVG 243
+++I+DT+GR + + EE+ ++ TNPD ++ V+D+ +GQ A + A F + +++
Sbjct: 181 YNVVIMDTAGRLHIDDEMMEELEKIKNITNPDEILMVVDAMVGQDAVNSALEFDKRLNLT 240
Query: 244 AVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGF 303
IV+KMDG A+GG LS T PV FIGTGE +D E F + VSR+LGMGD
Sbjct: 241 GFIVSKMDGDARGGVILSISYVTGKPVKFIGTGEKVDALEPFYAERIVSRILGMGDVLTL 300
Query: 304 MDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPK 363
++K + + + E+ +K+ FTL EQ + K+GP+ + +LPG PK
Sbjct: 301 IEKAEKELDKQKMEEIGKKILHAEFTLEDFKEQLAEMKKLGPLSSILELLPG-----APK 355
Query: 364 GREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYK 423
+ S+A +K+ +++SMT EE NP+++N SR +RIA+GSG V++V ++L+ Y+
Sbjct: 356 IDLEASEAWLKKVEAIINSMTKEE--RRNPRIINASRKLRIAKGSGTTVQDVNKLLKSYE 413
Query: 424 RLAKIWSKMK--GLKIPKK 440
+ ++ + K LK P K
Sbjct: 414 EMKELMKRFKQGKLKFPFK 432
>gi|302872185|ref|YP_003840821.1| signal recognition particle protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575044|gb|ADL42835.1| signal recognition particle protein [Caldicellulosiruptor
obsidiansis OB47]
Length = 443
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 236/423 (55%), Gaps = 10/423 (2%)
Query: 23 IDEKVLNECLNEITRALLQADVQFKLVRE-MQTNIKKIVNLDDLAAGHNKRRIIQQAIFN 81
+ EK + E + E+ ALL+ADV +K+V++ + T +K V + L + +++I+ +++
Sbjct: 22 LTEKDIKEAMKEVKLALLEADVNYKVVKDFINTVTQKAVGEEVLESLTPAQQVIK-IVYD 80
Query: 82 ELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFR 141
E+ +L T S+ M VGLQGSGKTTT K A +K+G P+LV D +R
Sbjct: 81 EMVNLLGGSDTKLTFSPSGFSIYMMVGLQGSGKTTTAGKLAGLLKKQGKNPSLVACDIYR 140
Query: 142 AGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAAL 201
A QL+ A K + Y YT D V+IA +G+E K D++I+DT+GR L
Sbjct: 141 PAAIKQLEVVAQKVGVKCYADYTSQDAVKIAKDGIEFAKSNRSDVVIIDTAGRLHINQEL 200
Query: 202 FEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALS 261
+E++ + A P ++ V+D+ GQ A + A+AF + + +I+TK+DG +GG ALS
Sbjct: 201 MDELKNIKNAVKPTEILLVVDAMTGQDAVNVAEAFNDQLGIDGIIMTKLDGDTRGGAALS 260
Query: 262 AVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQ 321
A T P+ F G GE M++ EVF SR+LGMGD ++K E + + EL +
Sbjct: 261 VKAITGKPIKFAGVGEKMEDLEVFHPDRMASRILGMGDVLTLIEKAQEAIDQKKAEELEK 320
Query: 322 KLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG--FSSELMPKGREKESQAKIKRYMTM 379
KL FTL +Q + I KMGP+ Q+ SM+PG ++ EKE +K+ +
Sbjct: 321 KLRSMQFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKE----LKKIEAI 376
Query: 380 MDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPK 439
++SMT EE +P ++N SR RIA GSG V++V +L++++ + ++ + K
Sbjct: 377 INSMTKEE--RQDPSIINSSRKRRIAMGSGTTVQDVNRLLKQFEDMKRMMKQFSNPSFAK 434
Query: 440 KGE 442
KG+
Sbjct: 435 KGK 437
>gi|339009345|ref|ZP_08641917.1| signal recognition particle protein [Brevibacillus laterosporus LMG
15441]
gi|338773823|gb|EGP33354.1| signal recognition particle protein [Brevibacillus laterosporus LMG
15441]
Length = 480
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/437 (33%), Positives = 235/437 (53%), Gaps = 7/437 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A ++ IDE ++NE + E+ ALL+ADV FK+V++ IK+
Sbjct: 1 MAFESLASRLQGAFDKLRGRGKIDETIVNEAMREVRLALLEADVNFKVVKQFVARIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
D+ +++ + + EL +++ P+VIM VGLQG+GKTTT K
Sbjct: 61 VGQDVLKSLTPGQMVIKVVNEELTELMGGNVSKLAVSNRPPTVIMMVGLQGAGKTTTTGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A QK+ KP LV D +R A QL+ + P + + PV IA + +E K
Sbjct: 121 LAKLLQKQNRKPMLVACDIYRPAAIKQLQVLGEQLSAPVFAMGDQVSPVEIATKAIEHAK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ + D +I+DT+GR + L EE++QV E PD ++ V+D+ GQ A + A++F +
Sbjct: 181 ENHYDYVILDTAGRLHIDETLMEELQQVREVAKPDEILLVVDAMTGQDAVNVAESFNNQL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG +GG ALS A T P+ F GE +D E F SR+LGMGD
Sbjct: 241 ELTGVILTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
++K E V +D+ E+ +++ +G FT + + Q + ++GP+ + MLPG +
Sbjct: 301 LSLIEKAQESVDVDKAKEMERQMRQGEFTFDMFLDSMQQMRQLGPLEDLLGMLPGMNKM- 359
Query: 361 MPKGRE--KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
KG + K + +I R ++ SMT EE +NP +MN +R RIA GSG ++EV
Sbjct: 360 --KGMKDLKVDEKQIARTEAIVKSMTKEE--RANPDIMNANRRKRIAAGSGTTIQEVNRF 415
Query: 419 LEEYKRLAKIWSKMKGL 435
+++++ + K+ + G+
Sbjct: 416 IKQFEDMKKMMKQFTGM 432
>gi|407795762|ref|ZP_11142720.1| signal recognition particle protein [Salimicrobium sp. MJ3]
gi|407020103|gb|EKE32817.1| signal recognition particle protein [Salimicrobium sp. MJ3]
Length = 446
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 242/449 (53%), Gaps = 25/449 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + IQ++ ++E+ + E E+ ALL+ADV FK+V++ IKKI
Sbjct: 1 MAFEGLSDRLQGTIQKIKGKGKVNEQDVKEMTREVRLALLEADVNFKVVKDF---IKKIR 57
Query: 61 N-------LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSG 113
++ L G +I+++ EL +++ + K P+VIM VGLQG+G
Sbjct: 58 ERAVGQEVMESLTPGQQVIKIVKE----ELSELMGGDESRIAVAKKPPTVIMMVGLQGAG 113
Query: 114 KTTTCTKYAYYHQKK-GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
KTTT K A +K KP L AD +R A DQL+ + P Y T++DPV IA
Sbjct: 114 KTTTAGKLANLLRKSYNRKPMLAAADVYRPAAIDQLETIGKQLDFPVYSEGTDADPVDIA 173
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
+ VE K++N D +I+DT+GR + L E+ +V EA NPD + V+D+ GQ A +
Sbjct: 174 RQAVEEAKEQNHDYLIIDTAGRLHIDGELMGELGRVKEAVNPDEIFLVVDAMTGQDAVNV 233
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
A++F + + + V++TK+DG +GG ALS A T P+ F+G GE +D EVF + S
Sbjct: 234 AESFDEQLDISGVLLTKLDGDTRGGAALSIKAVTGKPIKFVGMGEKLDALEVFHPERMAS 293
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 352
R+LGMGD ++K V Q EL K+ +FT EQ + MGP+ ++ M
Sbjct: 294 RILGMGDMLSLIEKAETQVDEKQAKELEAKMRNASFTFDDFLEQMAQVKNMGPLDEIIEM 353
Query: 353 LPGFSSELMPKGREKES--QAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 410
+PG S KG + S +I ++ SMT +E ++P +MN SR RIA+GSG
Sbjct: 354 IPGASK---MKGLKNASFDDKQIVHVEAIIQSMTKKE--RNDPSVMNASRKKRIAKGSGT 408
Query: 411 QVREVMEMLEEY---KRLAKIWSKMKGLK 436
V EV +L+++ K++ K +S KG K
Sbjct: 409 SVSEVNRLLKQFNEMKKMMKQFSNQKGKK 437
>gi|227824776|ref|ZP_03989608.1| signal recognition particle protein [Acidaminococcus sp. D21]
gi|226905275|gb|EEH91193.1| signal recognition particle protein [Acidaminococcus sp. D21]
Length = 448
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 144/445 (32%), Positives = 244/445 (54%), Gaps = 9/445 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L ++ AIQ++ + E+ L E L ++ ALL+ADV FK+V+E T IK+ V
Sbjct: 1 MAFEMLTDKLTAAIQKIRGQKTVTEQDLKETLRDVRLALLEADVNFKVVKEFTTKIKERV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ + I + + EL +L + P+VIM GLQG+GKTT+ K
Sbjct: 61 QGQKIDPNLTAGQYIVKVVHEELIALLGGEQSKLQFSSNPPTVIMLAGLQGAGKTTSIGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +K G KP +V D +R A QL+ + +P + +E PV IA E ++
Sbjct: 121 LANYLRKNGKKPLMVAGDVYRPAAITQLEVIGKELDMPVFSMGSEVSPVTIAQEAIKRAN 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
CD +++DT+GR + L +E++ + A +PD ++ V+D+ GQ A A+AF +++
Sbjct: 181 ALLCDTVLIDTAGRLHIDEKLMDELKNIKSAVHPDEILLVVDAMTGQDAVTVAEAFNKAL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ +IVTK+DG A+GG LS + PV F+G GE +D + F SR+LGMGD
Sbjct: 241 GITGLIVTKLDGDARGGAVLSVKSVADCPVKFVGMGEKLDALQPFYPDRMASRILGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG---FS 357
++K E + +D L + + FTL + +Q + + ++G + + SM+PG FS
Sbjct: 301 LSLIEKAQEAIDVDSAKRLAESMKHNEFTLDMFLDQMKQVKRLGSLESILSMIPGMGKFS 360
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
+ +G + + + +++R ++ SMT +E NP+++N SR RIA G G++V++V
Sbjct: 361 KQF--EGVDLDGK-EVRRLEAIITSMTPKE--RQNPRIINGSRRKRIAAGCGQRVQDVNR 415
Query: 418 MLEEYKRLAKIWSKMKGL-KIPKKG 441
+L++++ K+ M+G+ K +KG
Sbjct: 416 LLKQFEESKKLMKTMQGMNKYARKG 440
>gi|184155710|ref|YP_001844050.1| signal recognition particle protein [Lactobacillus fermentum IFO
3956]
gi|183227054|dbj|BAG27570.1| signal recognition particle protein [Lactobacillus fermentum IFO
3956]
Length = 484
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 238/435 (54%), Gaps = 8/435 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A++++ + E L E + EI ALL+ADV FK+V++ +++
Sbjct: 9 MAFEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKA 68
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N + I + + +EL +M+ P+VIM VGLQG+GKTTT K
Sbjct: 69 AGAEVLKGLNPAQQIVKIVNDELTEMMGETATPLNKSAHIPTVIMMVGLQGAGKTTTAGK 128
Query: 121 YAYYHQKK-GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A + +K+ +P + AD +R A QL+Q A +P + T+ DPV I +G+E
Sbjct: 129 LAKHLKKEENARPLFIAADVYRPAAITQLQQVAASIDVPVFEMGTDVDPVEIVRQGMEVA 188
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K+++ D +I+DT+GR + + L EE+ ++ E PD ++ V+D+ GQ A + AQ F
Sbjct: 189 KEKHNDYVIIDTAGRLQIDEQLMEELAKIKELAKPDEILLVVDAMTGQNAVNTAQGFDDQ 248
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ + V++TK+DG +GG A+S A T P+ F+G GE MD +VF SR+LGMGD
Sbjct: 249 LDITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMDNLDVFHPDRMASRILGMGD 308
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K E +Q + + K+ E +F +Q I KMGP+ + M+PG ++
Sbjct: 309 MMTLIEKAQENFDQEQATQAMAKMKENSFDFNDFLDQMDQITKMGPLEDLLKMMPGMANN 368
Query: 360 --LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
L + + A IK ++ SMT EE NP +MN SR R+A GSGR + EV
Sbjct: 369 PALQNINLDPKQFAHIK---AIIYSMTPEE--RENPDMMNPSRRRRLAAGSGRPIVEVNR 423
Query: 418 MLEEYKRLAKIWSKM 432
M++++ ++ K+ ++
Sbjct: 424 MIKQFNQMRKMMRQV 438
>gi|352683795|ref|YP_004895779.1| signal recognition particle protein [Acidaminococcus intestini
RyC-MR95]
gi|350278449|gb|AEQ21639.1| signal recognition particle protein [Acidaminococcus intestini
RyC-MR95]
Length = 448
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 144/445 (32%), Positives = 244/445 (54%), Gaps = 9/445 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L ++ AIQ++ + E+ L E L ++ ALL+ADV FK+V+E T IK+ V
Sbjct: 1 MAFEMLTDKLTAAIQKIRGQKTVTEQDLKETLRDVRLALLEADVNFKVVKEFTTKIKERV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ + I + + EL +L + P+VIM GLQG+GKTT+ K
Sbjct: 61 QGQKIDPNLTAGQYIVKVVHEELIALLGGEQSKLQFSSNPPTVIMLAGLQGAGKTTSIGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +K G KP +V D +R A QL+ + +P + +E PV IA E ++
Sbjct: 121 LANYLRKNGKKPLMVAGDVYRPAAITQLEVIGKELDMPVFSMGSEVSPVTIAQEAIKRAN 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
CD +++DT+GR + L +E++ + A +PD ++ V+D+ GQ A A+AF +++
Sbjct: 181 ALLCDTVLIDTAGRLHIDEKLMDELKNIKTAVHPDEILLVVDAMTGQDAVTVAEAFNKAL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ +IVTK+DG A+GG LS + PV F+G GE +D + F SR+LGMGD
Sbjct: 241 GITGLIVTKLDGDARGGAVLSVKSVADCPVKFVGMGEKLDALQPFYPDRMASRILGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG---FS 357
++K E + +D L + + FTL + +Q + + ++G + + SM+PG FS
Sbjct: 301 LSLIEKAQEAIDVDSAKRLAESMKHNEFTLDMFLDQMKQVKRLGSLESILSMIPGMGKFS 360
Query: 358 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
+ +G + + + +++R ++ SMT +E NP+++N SR RIA G G++V++V
Sbjct: 361 KQF--EGVDLDGK-EVRRLEAIITSMTPKE--RQNPRIINGSRRKRIAAGCGQRVQDVNR 415
Query: 418 MLEEYKRLAKIWSKMKGL-KIPKKG 441
+L++++ K+ M+G+ K +KG
Sbjct: 416 LLKQFEESKKLMKTMQGMNKYARKG 440
>gi|421872835|ref|ZP_16304452.1| signal recognition particle protein [Brevibacillus laterosporus
GI-9]
gi|372458250|emb|CCF14001.1| signal recognition particle protein [Brevibacillus laterosporus
GI-9]
Length = 480
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/437 (32%), Positives = 235/437 (53%), Gaps = 7/437 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A ++ IDE ++NE + E+ ALL+ADV FK+V++ +K+
Sbjct: 1 MAFESLASRLQGAFDKLRGRGKIDETIVNEAMREVRLALLEADVNFKVVKQFVARVKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
D+ +++ + + EL +++ P+VIM VGLQG+GKTTT K
Sbjct: 61 VGQDVLKSLTPGQMVIKVVNEELTELMGGNVSKLAVSNRPPTVIMMVGLQGAGKTTTTGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A QK+ KP LV D +R A QL+ + P + + PV IA + +E K
Sbjct: 121 LAKLLQKQNRKPMLVACDIYRPAAIKQLQVLGEQLSAPVFAMGDQVSPVEIATKAIEHAK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ + D +I+DT+GR + L EE++QV E PD ++ V+D+ GQ A + A++F +
Sbjct: 181 ENHYDYVILDTAGRLHIDETLMEELQQVREVAKPDEILLVVDAMTGQDAVNVAESFNNQL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG +GG ALS A T P+ F GE +D E F SR+LGMGD
Sbjct: 241 ELTGVILTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
++K E V +D+ E+ +++ +G FT + + Q + ++GP+ + MLPG +
Sbjct: 301 LSLIEKAQESVDVDKAKEMERQMRQGEFTFDMFLDSMQQMRQLGPLEDLLGMLPGMNKM- 359
Query: 361 MPKGRE--KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
KG + K + +I R ++ SMT EE +NP +MN +R RIA GSG ++EV
Sbjct: 360 --KGMKDLKVDEKQIARTEAIVKSMTKEE--RANPDIMNANRRKRIAAGSGTTIQEVNRF 415
Query: 419 LEEYKRLAKIWSKMKGL 435
+++++ + K+ + G+
Sbjct: 416 IKQFEDMKKMMKQFTGM 432
>gi|395238273|ref|ZP_10416210.1| Signal recognition particle protein [Lactobacillus gigeriorum CRBIP
24.85]
gi|394477845|emb|CCI86187.1| Signal recognition particle protein [Lactobacillus gigeriorum CRBIP
24.85]
Length = 476
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 235/433 (54%), Gaps = 4/433 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ I E+ +N EI ALL+ADV FK+V++ IK+
Sbjct: 1 MAFENLSERIQKALRNLTGKGKISEEDINAASREIRLALLEADVNFKVVKDFIKKIKQEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ + T K P+++M VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGESATTLTKSKHIPTIVMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + +P Y E D +I G+
Sbjct: 121 LAYHLQKTEHARPLLIAGDIYRPAAVDQLKQIGQQLNVPVYSEENEKDVSQIVARGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +++DT+GR + + L EE+ +V +PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELEKVKAVAHPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P+I+ G GE + + E F SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPIIYTGQGEKLTDLEDFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
+++ + + ++ +K+ E F +Q + + KMGP+ Q+ M+PG ++
Sbjct: 301 VLTLIERAQQDYDAKEAQKVAKKMRENTFDFNDFIDQLEQVQKMGPLDQIMKMIPGMANN 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
+ + + +I ++ SMT E + +P ++N SR RIA GSGR V EV M+
Sbjct: 361 PQLQNLSIDEK-QIAHTKAIVYSMT--EAERQDPDILNPSRRRRIAAGSGRPVVEVNRMI 417
Query: 420 EEYKRLAKIWSKM 432
+++K+ + SK+
Sbjct: 418 KQFKQARDLMSKI 430
>gi|158522321|ref|YP_001530191.1| signal recognition particle protein [Desulfococcus oleovorans Hxd3]
gi|158511147|gb|ABW68114.1| signal recognition particle protein [Desulfococcus oleovorans Hxd3]
Length = 443
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 241/428 (56%), Gaps = 5/428 (1%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-KIVNLDD 64
L ++ +++ + EK +++ L E+ ALL+ADV +++V++ +I+ + V D
Sbjct: 5 LSDKLNSVFKKLKGQGTLTEKNIDDGLKEVRFALLEADVHYRIVKQFIADIRERAVGADV 64
Query: 65 LAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYY 124
L + +++I+ ++ EL +++ + P +M VGLQGSGKTTT K A Y
Sbjct: 65 LESLTPGQQVIK-IVYEELTRLMGETRQDLNLTGQAPVSVMLVGLQGSGKTTTAAKLAVY 123
Query: 125 HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENC 184
+K+G KP LV AD +R A DQLK+ ++ ++P + S +PV I + +++ C
Sbjct: 124 LKKQGRKPFLVPADVYRPAAIDQLKKLGSQVQVPVFASDPGMNPVDICRQARVAAQQQGC 183
Query: 185 DLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 244
+ +++DT+GR + AL EE+ + +A +P ++ V D+ GQ A + AQ+F + + +G
Sbjct: 184 NTLLLDTAGRLHIDEALMEELVGIKQAVSPSDILLVADAMTGQDAVNIAQSFNERLDIGG 243
Query: 245 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 304
VI++KMDG A+GG ALS A T P+ F+G GE + E F S +LGMGD F+
Sbjct: 244 VILSKMDGDARGGAALSIKAVTGRPIKFVGVGEKTNALEAFHPDRMASSILGMGDVLSFI 303
Query: 305 DKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKG 364
+K VV + +L +KL + FTL +Q I KMG IG + M+PG K
Sbjct: 304 EKAQSVVDEKKAADLERKLRKNEFTLEDFRDQMTQIRKMGSIGDLMKMIPGMGKVKQMKD 363
Query: 365 REKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKR 424
E + ++ R +++SMT EE ++N SR RIA+GSG V+EV +L++Y +
Sbjct: 364 MEVDD-GQLSRIEAIINSMTAEE--RRRHAIINGSRRKRIAKGSGTSVQEVNRLLKDYTQ 420
Query: 425 LAKIWSKM 432
+ K+ K+
Sbjct: 421 VMKMVKKI 428
>gi|421860554|ref|ZP_16292660.1| GTPase [Paenibacillus popilliae ATCC 14706]
gi|410829740|dbj|GAC43097.1| GTPase [Paenibacillus popilliae ATCC 14706]
Length = 457
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 147/442 (33%), Positives = 235/442 (53%), Gaps = 6/442 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L G + ++ + E +NE + E+ ALL+ADV FK+V+E +K+
Sbjct: 1 MAFEGLTGRLQNVFGKLRGKGKVTEDDVNEAMREVRLALLEADVNFKVVKEFINKVKEKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ +I + EL +++ P+VIM GLQG+GKTTT K
Sbjct: 61 VGQEVMKSFTPGMVIVDIVNKELTELMGGTAAKLAKANKPPTVIMMAGLQGAGKTTTSGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A QK+ KP LV AD +R A QL+ + +P + + PV IA + +E +
Sbjct: 121 LAKLLQKQNHKPLLVAADIYRPAAIKQLEVLGAQINVPVFSLGDQVSPVEIARQAMEHAR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D +IVDT+GR + AL EE++Q+ E NPD V+ V+D+ GQ A + A++F Q +
Sbjct: 181 VNHLDYVIVDTAGRLHIDEALMEELKQIHETVNPDEVLLVVDAMTGQDAVNVAESFNQQL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
++ V++TK+DG +GG ALS A T P+ F GE +D E F + SR+LGMGD
Sbjct: 241 ALTGVVLTKLDGDTRGGAALSVKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
++K + D+ E+ K+ FT EQ Q + ++GPI Q+ M+PG +++
Sbjct: 301 LSLIEKAQANIDADKAKEMEMKMRNAAFTFDDFLEQMQQVKQLGPIDQILDMIPGM-NKM 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML- 419
K + ++ R ++ SMTN+E +P ++N SR RIA GSG + +V ++
Sbjct: 360 KQTANLKVDERQMGRIEAIVRSMTNKE--RQDPDMINHSRRKRIAAGSGTSLADVNRLIK 417
Query: 420 --EEYKRLAKIWSKMKGLKIPK 439
+E +R+ K +++M G K PK
Sbjct: 418 QFDEMRRMMKQFTEMMGPKGPK 439
>gi|329764770|ref|ZP_08256364.1| GTP-binding signal recognition particle [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329138734|gb|EGG42976.1| GTP-binding signal recognition particle [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 441
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 153/434 (35%), Positives = 257/434 (59%), Gaps = 7/434 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L ++ AI+++ ++ IDE+++ E ++ RALLQ+DV +LV E+ ++
Sbjct: 1 MLDNLRNNLRDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLEITKQLEARSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G +++ I + +++EL K+L GK + F K K + I+ +G+QGSGKTT K
Sbjct: 61 NETPPPGLSRKDHIVKILYDELAKLL--GKETDFDFKPNKQNKIIMLGIQGSGKTTVTAK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + K+G+ ++ ADT+R GA QLK K+ + YG D I G++ ++
Sbjct: 119 LAKFLTKQGYSVGVIGADTYRPGALVQLKTMCEKSNVEVYGEPNNKDSPDIVKNGLKHYE 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+II+DT+GRHK+E L EM Q+++ +NPDL I V+D +IGQ F+QA+AF +++
Sbjct: 179 NLPLDIIIIDTAGRHKEEKDLLSEMEQINKVSNPDLAILVIDGTIGQQCFNQAEAFHKTI 238
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG +I+TK+D AKGGGA++A AAT + ++++GTGE +D+ E F FV RLLGMGD
Sbjct: 239 PVGGIIITKLDSSAKGGGAIAASAATGAQIMYVGTGERIDDLEKFSPTRFVGRLLGMGDI 298
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
+D + + + + L+++S G + + Q + + K+G + +PG S +
Sbjct: 299 QAVLD-LAKRLENEGDDVRLKRISSGKMNMDDFFYQLEEVTKVGSLKGFLDNMPGLSG-M 356
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
+ + + + ++ ++ ++ SMT EE ++P L+N SRI RI+RGSG EV E+L+
Sbjct: 357 VKDDQLDQMEGRVSKWRFIIQSMTKEE--KADPDLLNSSRIKRISRGSGWPEHEVKELLK 414
Query: 421 EYKRLAKIWSKMKG 434
YK + KG
Sbjct: 415 NYKNSKSMMKASKG 428
>gi|359416559|ref|ZP_09208866.1| signal recognition particle protein Srp54 [Candidatus Haloredivivus
sp. G17]
gi|358033083|gb|EHK01681.1| signal recognition particle protein Srp54 [Candidatus Haloredivivus
sp. G17]
Length = 428
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 247/423 (58%), Gaps = 18/423 (4%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
+ +IQ+ S+ + +DE+ + E + +I R L+ ADV LV ++ I++ L+ G
Sbjct: 5 VKESIQKFSSKSAVDEEAVEELVKDIQRDLIAADVDVGLVSDLSDEIREEA-LEGKKDGL 63
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
++ + + ++N++ ++L KP + +P I+ GL G+GKTTT K A Y++K+G
Sbjct: 64 TRKEHVLETVYNKMEELLGQ-KPEI---EIEPQKILLSGLYGAGKTTTAAKLADYYRKRG 119
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
K L+ ADT R A+DQLKQ A KA FYG +P ++ +G++ + ++IIV
Sbjct: 120 LKTGLIAADTDRPAAYDQLKQMAEKADSEFYGDPEAENPSQVVEKGLQEL---DAEVIIV 176
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
D++GR+ + L +E+ V + PD VM + IGQ+A DQA+ F+ +V + VIVTK
Sbjct: 177 DSAGRNSLDDELKKELSDVEDVLRPDESYLVMPADIGQSAKDQAENFEDAVGITGVIVTK 236
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
MD AKGGGAL A + + + V FIGTGE + + EV+D +VS +LG + ++K+ E
Sbjct: 237 MDSSAKGGGALIACSMSDAQVKFIGTGEQVTDLEVYDPVKYVSEMLGQPNLESLLEKVEE 296
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 369
++ PE ++ EG FTL+ +Q +++ + G + + LP F + MP + +
Sbjct: 297 ---LETDPE---EMLEGEFTLKEFRQQIESVSETGMMEDLMKQLP-FGGK-MPDNISQLT 348
Query: 370 QAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIW 429
+ K + Y ++DSMT+EE+ ++P L+N SR RIA GSG EV E+++ Y++ +
Sbjct: 349 EEKTQAYKYIIDSMTDEEI--NDPSLINKSRTERIASGSGTSNSEVRELIKHYRQTKNMM 406
Query: 430 SKM 432
KM
Sbjct: 407 DKM 409
>gi|260663573|ref|ZP_05864463.1| signal recognition particle protein [Lactobacillus fermentum
28-3-CHN]
gi|260552114|gb|EEX25167.1| signal recognition particle protein [Lactobacillus fermentum
28-3-CHN]
Length = 484
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 237/435 (54%), Gaps = 8/435 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A++++ + E L E + EI ALL+ADV FK+V++ +++
Sbjct: 9 MAFEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKA 68
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N + I + + +EL +M+ P+VIM VGLQG+GKTTT K
Sbjct: 69 AGAEVLKGLNPAQQIVKIVNDELTEMMGETATPLNKSAHIPTVIMMVGLQGAGKTTTAGK 128
Query: 121 YAYYHQKK-GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A +K+ +P + AD +R A QL+Q A +P + T+ DPV I +G+E
Sbjct: 129 LAKRLKKEENARPLFIAADVYRPAAITQLQQVAASIDVPVFEMGTDVDPVEIVRQGMEVA 188
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K+++ D +I+DT+GR + + L EE+ ++ E PD ++ V+D+ GQ A + AQ F
Sbjct: 189 KEKHNDYVIIDTAGRLQIDEQLMEELAKIKELAKPDEILLVVDAMTGQNAVNTAQGFDDQ 248
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ + V++TK+DG +GG A+S A T P+ F+G GE MD +VF SR+LGMGD
Sbjct: 249 LDITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMDNLDVFHPDRMASRILGMGD 308
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K E +Q + + K+ E +F +Q I KMGP+ + M+PG ++
Sbjct: 309 MMTLIEKAQENFDQEQATQAMAKMKENSFDFNDFLDQMDQITKMGPLEDLLKMMPGMANN 368
Query: 360 --LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
L + + A IK ++ SMT EE NP +MN SR R+A GSGR + EV
Sbjct: 369 PALQNINLDPKQFAHIK---AIIYSMTPEE--RENPDMMNPSRRRRLAAGSGRPIVEVNR 423
Query: 418 MLEEYKRLAKIWSKM 432
M++++ ++ K+ ++
Sbjct: 424 MIKQFNQMRKMMRQV 438
>gi|227515698|ref|ZP_03945747.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus fermentum
ATCC 14931]
gi|227085946|gb|EEI21258.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus fermentum
ATCC 14931]
Length = 476
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 237/435 (54%), Gaps = 8/435 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A++++ + E L E + EI ALL+ADV FK+V++ +++
Sbjct: 1 MAFEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N + I + + +EL +M+ P+VIM VGLQG+GKTTT K
Sbjct: 61 AGAEVLKGLNPAQQIVKIVNDELTEMMGETATPLNKSAHIPTVIMMVGLQGAGKTTTAGK 120
Query: 121 YAYYHQKK-GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A +K+ +P + AD +R A QL+Q A +P + T+ DPV I +G+E
Sbjct: 121 LAKRLKKEENARPLFIAADVYRPAAITQLQQVAASIDVPVFEMGTDVDPVEIVRQGMEVA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K+++ D +I+DT+GR + + L EE+ ++ E PD ++ V+D+ GQ A + AQ F
Sbjct: 181 KEKHNDYVIIDTAGRLQIDEQLMEELAKIKELAKPDEILLVVDAMTGQNAVNTAQGFDDQ 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ + V++TK+DG +GG A+S A T P+ F+G GE MD +VF SR+LGMGD
Sbjct: 241 LDITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMDNLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K E +Q + + K+ E +F +Q I KMGP+ + M+PG ++
Sbjct: 301 MMTLIEKAQENFDQEQATQAMAKMKENSFDFNDFLDQMDQITKMGPLEDLLKMMPGMANN 360
Query: 360 --LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 417
L + + A IK ++ SMT EE NP +MN SR R+A GSGR + EV
Sbjct: 361 PALQNINLDPKQFAHIK---AIIYSMTPEE--RENPDMMNPSRRRRLAAGSGRPIVEVNR 415
Query: 418 MLEEYKRLAKIWSKM 432
M++++ ++ K+ ++
Sbjct: 416 MIKQFNQMRKMMRQV 430
>gi|254169167|ref|ZP_04876003.1| SRP54-type protein, GTPase domain [Aciduliprofundum boonei T469]
gi|197621902|gb|EDY34481.1| SRP54-type protein, GTPase domain [Aciduliprofundum boonei T469]
Length = 366
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 145/372 (38%), Positives = 218/372 (58%), Gaps = 7/372 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ I+++S A +DE ++ E + +I RALL+ADV+ L ++ N+++
Sbjct: 1 MLDSLGESLRNTIRKISKAGYVDESLIKEVVRDIQRALLRADVEVHLALKLSKNVERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ +G + R + + I+ EL +L K KP +M VGL G GKTTT K
Sbjct: 61 EEKPPSGMSHRDFLIKIIYEELVAILGKEKEVAL----KPQKLMLVGLYGQGKTTTAGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y KKG AL+ D R A++QLKQ + +P +G E D +IA E V+ K
Sbjct: 117 ARYFHKKGLSVALIACDVHRPAAYEQLKQIGEQLNVPVFGIPGEKDARKIAREAVKKMK- 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ + I DTSGRH E L EE++ + E PD + V+D++IGQ A QA+AF +V
Sbjct: 176 -DYQVQIFDTSGRHALEDDLIEEIKDLKEIIQPDEIFLVLDATIGQQAGKQAKAFHDAVG 234
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
V VI+TKMDG AKGGGALSAVAAT +PV+FIGTGEH+++ E F+ F+SRLLGMGD
Sbjct: 235 VTGVIITKMDGSAKGGGALSAVAATGAPVVFIGTGEHLEDLEHFNPTRFISRLLGMGDLE 294
Query: 302 GFMD-KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
++ + ++ ++++++ G F L+ MYE ++ + K G + ++ LP F
Sbjct: 295 TLLETAKELELKEEEAEKVMERMMSGKFNLKDMYEIWEQMAKPGLLQKILYSLPFFKMGD 354
Query: 361 MPKGREKESQAK 372
+ KG +ES+ K
Sbjct: 355 IDKGMVEESEEK 366
>gi|449513469|ref|XP_004164333.1| PREDICTED: signal recognition particle 54 kDa protein 3-like
[Cucumis sativus]
Length = 144
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 122/143 (85%), Positives = 139/143 (97%)
Query: 352 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 411
MLPG+S++LMPKGREKESQAK+KRYMTMMDSMT+EELDS+NPKL+N+SR+MRIARGSG +
Sbjct: 1 MLPGYSADLMPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHR 60
Query: 412 VREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVG 471
V+EVMEM+EEYKRLAK+WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP +LKQIGG+G
Sbjct: 61 VQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMG 120
Query: 472 GLQNLMKQMGSTKDMMGMFGGGE 494
GLQ+LMKQMGS KDMMGMFGGG+
Sbjct: 121 GLQSLMKQMGSNKDMMGMFGGGD 143
>gi|70943991|ref|XP_741976.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520694|emb|CAH80619.1| hypothetical protein PC000130.04.0 [Plasmodium chabaudi chabaudi]
Length = 201
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 117/201 (58%), Positives = 156/201 (77%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ A + D+ V+ ECL EI RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGAQLTSALQKIQAAPVADDAVIEECLKEIVRALILADINVIYLKDIKSNIKKNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G+NK+R++Q+ + EL K+L+ K S+ PKKG +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNAAAYGNNKKRLVQKYVVEELIKLLEGKKESYVPKKGGRNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+QKKG+K AL+CADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 YAHYYQKKGFKTALICADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIATDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAAL 201
K+ DLIIVD+SGRHKQE L
Sbjct: 181 KDKYDLIIVDSSGRHKQENDL 201
>gi|444912237|ref|ZP_21232402.1| Signal recognition particle, subunit Ffh SRP54 [Cystobacter fuscus
DSM 2262]
gi|444717145|gb|ELW57980.1| Signal recognition particle, subunit Ffh SRP54 [Cystobacter fuscus
DSM 2262]
Length = 542
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 258/483 (53%), Gaps = 30/483 (6%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKK-----IVNLDDLAA 67
A +++ + I ++++E L +I +LL+ADV F +V++ +++ +V
Sbjct: 12 AKNRLAGKSEITPEMVDESLRDIRVSLLEADVAFDVVKKFVARVREKAVGEVVQTTITDK 71
Query: 68 GHNKRRIIQQAIFNELCK-----MLDPGKPSFTPK-KGKPSVIMFVGLQGSGKTTTCTKY 121
NKRR+ F ++C ++ P S K + + S IM VGLQGSGKTTT K
Sbjct: 72 AGNKRRVSAGDHFVKICHDELEALMGPVDTSLQLKPRDQLSGIMMVGLQGSGKTTTTGKL 131
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A K+G KP LV AD +R A DQLK + K+P Y + P +A G ++
Sbjct: 132 ASKLLKEGRKPLLVAADIYRPAAVDQLKVLGERLKVPVYFEPNVAPP-ELARRGYAAARE 190
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ CD++++DT+GR + AL E+ + PD ++ V D+ IGQ A A F + +S
Sbjct: 191 QKCDVVLIDTAGRLAIDEALMTELEAIKGQVRPDNILLVCDAMIGQDAVRTAAEFDRRLS 250
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+ I+TK+DG A+GG ALS T P+ F+G GE MD+ E F SR+LG GD
Sbjct: 251 LDGFILTKLDGDARGGAALSIKEVTGKPIKFLGMGESMDKLEEFRPDGLASRILGFGDIV 310
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF---SS 358
G M +VV + E QKL GNFT++ Q + + KMGP+ + P F +
Sbjct: 311 GLMKDFEQVVDEKKAAEDAQKLLSGNFTMKDFVGQIRMVRKMGPLKDLLEKFPLFGEMTE 370
Query: 359 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 418
+L P + ++ + +M DSMT +E P+++NDSR+ RIA+GSGR+ EV E+
Sbjct: 371 QLNP------DETELTKIESMYDSMTEQE--RLRPQIINDSRVKRIAKGSGRKTEEVREL 422
Query: 419 LEEYKRLAKIWSKM---KGL--KIPKKGEMSALS--RNMNAQHMSKVLPQGMLKQIGGVG 471
L+++ + ++ + GL +IP +M L+ +NM+ M P+ M K + G+G
Sbjct: 423 LQKFGMMQQVMGTIGQNPGLLGRIPGFKQMGQLAQMKNMDLSSMFGKDPKMMEKAMAGMG 482
Query: 472 GLQ 474
G+Q
Sbjct: 483 GMQ 485
>gi|433546093|ref|ZP_20502431.1| hypothetical protein D478_20514 [Brevibacillus agri BAB-2500]
gi|432182709|gb|ELK40272.1| hypothetical protein D478_20514 [Brevibacillus agri BAB-2500]
Length = 471
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/435 (32%), Positives = 231/435 (53%), Gaps = 5/435 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A ++ IDE V+NE + E+ ALL+ADV FK+V++ +K+
Sbjct: 1 MAFESLANRLQNAFDKLRGRGKIDETVVNEAMREVRLALLEADVNFKVVKDFVARVKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ +++ + + EL ++ T P+VIM GLQG+GKTTT K
Sbjct: 61 VGQEVMKSLTPGQMVIKIVNEELVALMGGSVAQLTMAHRPPTVIMMAGLQGAGKTTTTGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QK+ KP LV AD +R A QL+ + +P + + PV IA + +E K
Sbjct: 121 LAKYLQKQNKKPLLVAADIYRPAAIKQLQVLGEQLNVPVFTLGDQVSPVDIARQAIEHAK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D++I+DT+GR + AL +E++Q+ E PD ++ V+D+ GQ A + A++F +
Sbjct: 181 ANHLDVVILDTAGRLHIDEALMDELKQIREVAKPDEILLVVDAMTGQDAVNVAESFNSQL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG +GG ALS A T P+ F GE +D E F SR+LGMGD
Sbjct: 241 ELTGVVLTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
++K V ++ ++ +++ +G FT + + Q + +GP + MLPG +
Sbjct: 301 LSLIEKAQASVDEEKARDMERQMRQGEFTFDMFLDSMQQLRNLGPFEDILGMLPGMNKM- 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
KG+ + +I R + SMT E +NP L+N SR RIA GSG ++EV ++
Sbjct: 360 --KGKMNVDEKQIARVEAIAKSMTKAE--RANPDLLNASRRKRIASGSGTSIQEVNRFIK 415
Query: 421 EYKRLAKIWSKMKGL 435
+++ + K+ + G+
Sbjct: 416 QFEEMKKMMKQFSGV 430
>gi|399047100|ref|ZP_10739232.1| signal recognition particle protein [Brevibacillus sp. CF112]
gi|398054933|gb|EJL47031.1| signal recognition particle protein [Brevibacillus sp. CF112]
Length = 471
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/435 (32%), Positives = 231/435 (53%), Gaps = 5/435 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A ++ IDE V+NE + E+ ALL+ADV FK+V++ +K+
Sbjct: 1 MAFESLANRLQNAFDKLRGRGKIDETVVNEAMREVRLALLEADVNFKVVKDFVARVKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ +++ + + EL ++ T P+VIM GLQG+GKTTT K
Sbjct: 61 VGQEVMKSLTPGQMVIKIVNEELVALMGGSVAQLTMAHRPPTVIMMAGLQGAGKTTTTGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QK+ KP LV AD +R A QL+ + +P + + PV IA + +E K
Sbjct: 121 LAKYLQKQNKKPLLVAADIYRPAAIKQLQVLGEQLNVPVFTLGDQVSPVDIARQAIEHAK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D++I+DT+GR + AL +E++Q+ E PD ++ V+D+ GQ A + A++F +
Sbjct: 181 ANHLDVVILDTAGRLHIDEALMDELKQIREVAKPDEILLVVDAMTGQDAVNVAESFNSQL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG +GG ALS A T P+ F GE +D E F SR+LGMGD
Sbjct: 241 ELTGVVLTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 360
++K V ++ ++ +++ +G FT + + Q + +GP + MLPG +
Sbjct: 301 LSLIEKAQASVDEEKARDMERQMRQGEFTFDMFLDSMQQLRNLGPFEDILGMLPGMNKM- 359
Query: 361 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 420
KG+ + +I R + SMT E +NP L+N SR RIA GSG ++EV ++
Sbjct: 360 --KGKMNVDEKQIARVEAIAKSMTKAE--RANPDLLNASRRKRIASGSGTSIQEVNRFIK 415
Query: 421 EYKRLAKIWSKMKGL 435
+++ + K+ + G+
Sbjct: 416 QFEEMKKMMKQFTGV 430
>gi|297544730|ref|YP_003677032.1| signal recognition particle protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842505|gb|ADH61021.1| signal recognition particle protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 446
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/426 (34%), Positives = 232/426 (54%), Gaps = 13/426 (3%)
Query: 23 IDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV----NLDDLAAGHNKRRIIQQA 78
+ EK + E + E+ ALL+ADV FK+V++ ++ + ++ L G +I+
Sbjct: 23 LTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESLTPGQQVIKIVN-- 80
Query: 79 IFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCAD 138
+EL ++ + P+VIM VGLQGSGKTT C K A +K+G P LV D
Sbjct: 81 --DELIALMGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACD 138
Query: 139 TFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQE 198
R A QL+ +P + +++PV IA ++ + N D+II+DT+GR +
Sbjct: 139 VVRPAAIKQLQVVGANVNVPVFTMGDKANPVDIAKASIDYARSHNSDVIIIDTAGRLHID 198
Query: 199 AALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGG 258
L EE+ + A PD ++ V+D+ GQ A + A +F + + + VI+TK+DG +GG
Sbjct: 199 EELMEELVNIKRAVQPDEILLVVDAMTGQDAVNVASSFNERLDITGVILTKLDGDTRGGA 258
Query: 259 ALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPE 318
ALS A T+ P+ ++GTGE + + E F SR+LGMGD ++K + + E
Sbjct: 259 ALSIKAVTQKPIKYVGTGEKLTDLEPFYPNRMASRILGMGDVLTLIEKAQAAIDEKKAQE 318
Query: 319 LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMT 378
L QKL FTL EQ Q++ MGP+ Q+ SM+PG + ++ S+ +KR
Sbjct: 319 LGQKLLTKQFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLK--NVDISEKDLKRIEA 376
Query: 379 MMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGL-KI 437
++ SMT EE NP ++N SR RIA+GSG +++V +L++++ K+ K + K
Sbjct: 377 IIQSMTKEE--RQNPSIINGSRKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADIDKD 434
Query: 438 PKKGEM 443
KKG+M
Sbjct: 435 LKKGKM 440
>gi|423335535|ref|ZP_17313310.1| signal recognition particle protein [Lactobacillus reuteri ATCC
53608]
gi|337728765|emb|CCC03884.1| signal recognition particle protein [Lactobacillus reuteri ATCC
53608]
Length = 481
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/433 (32%), Positives = 234/433 (54%), Gaps = 4/433 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A++++ + E L E + EI ALL+ADV FK+V++ +++
Sbjct: 1 MAFEGLTDRLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N + I + + +EL K++ P+VIM VGLQG+GKTTT K
Sbjct: 61 AGAEVLKGLNPAQQIVKIVNDELTKLMGEEAVPLNKAPHIPTVIMMVGLQGAGKTTTAGK 120
Query: 121 YAYYHQKKGW-KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A + + +P + AD +R A QL+Q A + +P + T+ DPV I EG+E
Sbjct: 121 LALRLKNENHARPMFIAADVYRPAAITQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KK + D +I+DT+GR + + L +E+ + E NP+ ++ V+DS GQ A + AQ F
Sbjct: 181 KKNHNDYVIIDTAGRLQIDEQLMDELANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDK 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+++ VI+TK+DG +GG A+S A T P+ F+G GE M++ +VF SR+LGMGD
Sbjct: 241 LNITGVILTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 359
++K + +Q E + K+ E F Q + KMGP+ + M+PG ++
Sbjct: 301 MMTLIEKAQKNFDEEQAQETMDKMRENTFDYNDFLAQMDQVTKMGPLENIIKMMPGMANN 360
Query: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 419
K + + + ++ SMT EE NP LMN SR R+A G+GR + EV M+
Sbjct: 361 PALKNLNLDPK-QFAHIRAIVLSMTPEE--RENPDLMNPSRRRRLAAGAGRPIVEVNRMI 417
Query: 420 EEYKRLAKIWSKM 432
+++ ++ K+ ++
Sbjct: 418 KQFNQMRKMMKQV 430
>gi|254169193|ref|ZP_04876028.1| SRP54-type protein, GTPase domain [Aciduliprofundum boonei T469]
gi|197621851|gb|EDY34431.1| SRP54-type protein, GTPase domain [Aciduliprofundum boonei T469]
Length = 348
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/354 (39%), Positives = 210/354 (59%), Gaps = 7/354 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ I+++S A +DE ++ E + +I RALL+ADV+ L ++ N+++
Sbjct: 1 MLDSLGESLRNTIRKISKAGYVDESLIKEVVRDIQRALLRADVEVHLALKLSKNVERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ +G + R + + I+ EL +L K KP +M VGL G GKTTT K
Sbjct: 61 EEKPPSGMSHRDFLIKIIYEELVAILGKEKEVAL----KPQKLMLVGLYGQGKTTTAGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y KKG AL+ D R A++QLKQ + +P +G E D +IA + V+ K
Sbjct: 117 ARYFHKKGLSVALIACDVHRPAAYEQLKQIGEQLNVPVFGIPGEKDARKIARDAVKKMK- 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ + I DTSGRH E L EE++ + E PD + V+D++IGQ A QA+AF +V
Sbjct: 176 -DYQVQIFDTSGRHALEDDLIEEIKDLKEIIQPDEIFLVLDATIGQQAGKQAKAFHDAVG 234
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
V VI+TKMDG AKGGGALSAVAAT +PV+FIGTGEH+++ E F+ F+SRLLGMGD
Sbjct: 235 VTGVIITKMDGSAKGGGALSAVAATGAPVVFIGTGEHLEDLEHFNPTRFISRLLGMGDLE 294
Query: 302 GFMDKIHEVVPMDQQPE-LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 354
++ E+ + + E +++++ G F L+ MYE ++ + K G + ++ LP
Sbjct: 295 TLLETAKELELKEVEAEKVMERMMSGKFNLKDMYEIWEQMAKPGLLQKILYSLP 348
>gi|312134783|ref|YP_004002121.1| signal recognition particle protein [Caldicellulosiruptor
owensensis OL]
gi|311774834|gb|ADQ04321.1| signal recognition particle protein [Caldicellulosiruptor
owensensis OL]
Length = 443
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 235/424 (55%), Gaps = 10/424 (2%)
Query: 23 IDEKVLNECLNEITRALLQADVQFKLVREMQTNI-KKIVNLDDLAAGHNKRRIIQQAIFN 81
+ EK + E + E+ ALL+ADV +K+V++ N+ +K V + L + +++I+ +++
Sbjct: 22 LTEKDIKEAMKEVKLALLEADVNYKVVKDFINNVTQKAVGEEVLESLTPAQQVIK-IVYD 80
Query: 82 ELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFR 141
E+ +L T S+ M VGLQGSGKTTT K A +K+G P LV D +R
Sbjct: 81 EMVNLLGGSDAKLTFSPSGFSIYMMVGLQGSGKTTTAGKLAGLLKKQGKNPLLVACDIYR 140
Query: 142 AGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAAL 201
A QL+ A K + Y YT D V+IA +G+E K D++I+DT+GR L
Sbjct: 141 PAAIKQLEVVAQKVGVKCYADYTSQDAVKIAKDGIEFAKSNRSDVVIIDTAGRLHINQEL 200
Query: 202 FEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALS 261
+E++ + A P ++ V+D+ GQ A + A+AF + + +I+TK+DG +GG ALS
Sbjct: 201 MDELKNIKNAVKPTEILLVVDAMTGQDAVNVAEAFNAQLGIDGIIMTKLDGDTRGGAALS 260
Query: 262 AVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQ 321
A T P+ F G GE M++ E F SR+LGMGD ++K E + + EL +
Sbjct: 261 VKAITGKPIKFAGVGEKMEDLEPFYPDRMASRILGMGDILTLIEKAQEAIDQKKAEELEK 320
Query: 322 KLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG--FSSELMPKGREKESQAKIKRYMTM 379
KL FTL +Q + I KMGP+ Q+ SM+PG ++ EKE +K+ +
Sbjct: 321 KLRSMQFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKE----LKKIEAI 376
Query: 380 MDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPK 439
++SMT EE +P ++N SR RIA GSG V++V +L++++ + ++ + K
Sbjct: 377 INSMTREE--RQDPSIINSSRKRRIAMGSGTTVQDVNRLLKQFEDMKRMMKQFSNPNFAK 434
Query: 440 KGEM 443
KG++
Sbjct: 435 KGKI 438
>gi|218782478|ref|YP_002433796.1| signal recognition particle protein [Desulfatibacillum alkenivorans
AK-01]
gi|218763862|gb|ACL06328.1| signal recognition particle protein [Desulfatibacillum alkenivorans
AK-01]
Length = 442
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 156/428 (36%), Positives = 233/428 (54%), Gaps = 11/428 (2%)
Query: 23 IDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN----LDDLAAGHNKRRIIQQA 78
+ EK + + L E+ ALL+ADV +K+V+ + IK+ L+ L G +I+ +
Sbjct: 22 LSEKNIQDGLKEVRLALLEADVHYKVVKTLIAAIKERAVGQEVLESLTPGQQVVKIVNE- 80
Query: 79 IFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCAD 138
EL ++ G P+ IM VGLQGSGKTTT K A Y + +G KP LV AD
Sbjct: 81 ---ELTNLMGGANEEINLGGGHPASIMLVGLQGSGKTTTAGKLAVYLRGQGRKPYLVPAD 137
Query: 139 TFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQE 198
+R A +QL + + IP Y S T+S P +IA +E CD +I+DT+GR +
Sbjct: 138 VYRPAAIEQLTKIGKELSIPVYPSDTDSKPEKIAELARIKCAQEGCDTMILDTAGRLHID 197
Query: 199 AALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGG 258
L E+ ++ T P ++ V D+ GQ A + A+AF ++ VG VI+TKMDG A+GG
Sbjct: 198 DELMAELGRIKATTPPSDILLVADAMTGQDAVNMAKAFNDAMDVGGVILTKMDGDARGGA 257
Query: 259 ALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPE 318
ALS + T P+ FIGTGE + FE F SR+LGMGD ++K + V + + E
Sbjct: 258 ALSIRSITGKPIKFIGTGEKSNAFEAFHPNRMASRILGMGDVMTLIEKAQDAVDVKKAAE 317
Query: 319 LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMT 378
L +KL + FTL +Q + KMG + + SM+PG K + K S ++ +
Sbjct: 318 LEKKLRKSQFTLEDFKDQMVQVRKMGSLEDIMSMIPGMGKSKHLK-QLKGSDKEMIKIEA 376
Query: 379 MMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIP 438
+++SMT EE N ++N SR RIA+GSG V +V ++L+ Y ++ K+ K+ +
Sbjct: 377 IINSMTLEE--RRNHTIINGSRRKRIAKGSGATVTDVNQLLKNYTQVMKMMKKINKGGMK 434
Query: 439 KKGEMSAL 446
K G M L
Sbjct: 435 KMGRMLGL 442
>gi|221633791|ref|YP_002523017.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
gi|221156000|gb|ACM05127.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
Length = 488
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/427 (32%), Positives = 241/427 (56%), Gaps = 3/427 (0%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L +++ Q++ + E+ ++E L E+ RALL+ADV + +VR+ +++ +++
Sbjct: 5 LTDRLTQVFQRIGRKGRLTEEDVDEALREVRRALLEADVHYTVVRDFIAAVRERAIGEEV 64
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
+ + + EL ++L + P++IM VGLQGSGKTT K Y+
Sbjct: 65 LRSLTPAQQVIAIVHQELVRVLGSERVPLLWASQPPTIIMLVGLQGSGKTTQVAKLGYHL 124
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
+K+G +P LV AD +R A +QL+ + +P Y T+ DPV V+ + + +
Sbjct: 125 RKEGRRPLLVAADIYRPAAVEQLRTLGKQHDLPVYDEGTKVDPVETVKHAVKVARDQGYN 184
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
+I+DT+GR + + + +E+ +++EA P ++ V D+ GQ A + A+ F + +S+ +
Sbjct: 185 PVIIDTAGRLQIDEPMMQELERMAEAVRPTEILLVADAMTGQEAVNVAKEFHRRLSLTGL 244
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TK+DG A+GG ALS A P+ FIGTGE +D E F +R+LGMGD ++
Sbjct: 245 ILTKLDGDARGGAALSIRAVVGVPIKFIGTGERVDALEPFYPDRLATRILGMGDVLSLIE 304
Query: 306 KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGR 365
K + + ++ +L +KL G F L Q Q + KMGP+ Q+ M+PG +L+ + +
Sbjct: 305 KAQQQISQEEGKKLQEKLLAGTFDLEDFLRQLQQVKKMGPLTQLLEMIPGM-GQLLRQQQ 363
Query: 366 EKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRL 425
+ S + KR ++ SMT EE NP ++N SR RIA+GSG + EV ++L ++K++
Sbjct: 364 VQISDDEYKRIEAIILSMTPEE--RRNPDIINYSRRRRIAQGSGTTIAEVSQLLTQFKQM 421
Query: 426 AKIWSKM 432
++ +++
Sbjct: 422 QRMMAEL 428
>gi|167040350|ref|YP_001663335.1| signal recognition particle protein [Thermoanaerobacter sp. X514]
gi|256750717|ref|ZP_05491602.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914434|ref|ZP_07131750.1| signal recognition particle protein [Thermoanaerobacter sp. X561]
gi|307724330|ref|YP_003904081.1| signal recognition particle protein [Thermoanaerobacter sp. X513]
gi|166854590|gb|ABY92999.1| signal recognition particle protein [Thermoanaerobacter sp. X514]
gi|256750300|gb|EEU63319.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889369|gb|EFK84515.1| signal recognition particle protein [Thermoanaerobacter sp. X561]
gi|307581391|gb|ADN54790.1| signal recognition particle protein [Thermoanaerobacter sp. X513]
Length = 446
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 231/426 (54%), Gaps = 13/426 (3%)
Query: 23 IDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV----NLDDLAAGHNKRRIIQQA 78
+ EK + E + E+ ALL+ADV FK+V++ ++ + ++ L G +I+
Sbjct: 23 LTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESLTPGQQVIKIVN-- 80
Query: 79 IFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCAD 138
+EL ++ + P+VIM VGLQGSGKTT C K A +K+G P LV D
Sbjct: 81 --DELIALMGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACD 138
Query: 139 TFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQE 198
R A QL+ +P + + +PV IA ++ K N D+II+DT+GR +
Sbjct: 139 VVRPAAIKQLQVVGANVNVPVFTMGDKVNPVDIAKASIDYAKSHNSDVIIIDTAGRLHVD 198
Query: 199 AALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGG 258
L EE+ + +A PD ++ V+D+ GQ A + A +F + + VI+TK+DG +GG
Sbjct: 199 EELMEELVNIKKAVQPDEILLVVDAMTGQDAVNVASSFNARLDITGVILTKLDGDTRGGA 258
Query: 259 ALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPE 318
ALS A T+ P+ +IGTGE + + E F SR+LGMGD ++K + + E
Sbjct: 259 ALSIKAVTQKPIKYIGTGEKLTDLEPFYPDRMASRILGMGDVLTLIEKAQAAIDEKKAQE 318
Query: 319 LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMT 378
L QKL FTL EQ Q++ MGP+ Q+ SM+PG + ++ S+ +KR
Sbjct: 319 LGQKLLTKQFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLK--NVDFSEKDLKRIEA 376
Query: 379 MMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGL-KI 437
++ SMT EE NP ++N SR RIA+GSG +++V +L++++ K+ K + K
Sbjct: 377 IIQSMTKEE--RQNPSIINGSRKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADIDKD 434
Query: 438 PKKGEM 443
KKG+M
Sbjct: 435 LKKGKM 440
>gi|167043460|gb|ABZ08157.1| putative SRP54-type protein, GTPase domain protein [uncultured
marine microorganism HF4000_APKG2H5]
Length = 504
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/439 (34%), Positives = 241/439 (54%), Gaps = 16/439 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L L I ++ + IDE+ + E + +ALL+AD + +E+ I++ +
Sbjct: 53 MALDGLKHRIMGSVGALRGKRKIDEESVKELGRSLRKALLEADFNVRHSKELTERIERRM 112
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G I+ EL ++L P + P I+ VGL G GKTTT K
Sbjct: 113 LEEEPRPGIKLDTHAMNLIYAELVRLLGPAR-EIMPHN---QTILMVGLYGQGKTTTTAK 168
Query: 121 YA-YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A ++ ++ G K A++ AD R GA++QL+Q + YG ESD +I G+
Sbjct: 169 LADWWRRRHGLKVAVIEADAHRPGAYEQLQQLLEGTNVDVYGEPGESDATKIVRNGIRNV 228
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
D++I+DT+GR + L +E+ +++E N V+D+ +GQAA AQ+F +
Sbjct: 229 G--TADVLIIDTAGRDGLDDELRDELVRIAEVANATECFLVIDAQVGQAAGPVAQSFHEL 286
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V V IVTK+DG A+GGGALSAVA T +P++F+G GE + + E+F+ F+SRLLG+GD
Sbjct: 287 VGVTGTIVTKLDGTARGGGALSAVATTGAPIVFVGEGERIQDLELFESDRFISRLLGLGD 346
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP----- 354
G +D + ++ L Q+L G FTL MY Q + + K+G + ++ S LP
Sbjct: 347 IQGLIDLAPGDLDQEEAARLAQRLMSGRFTLTDMYSQMEMMSKIGTVDKLLSHLPDAMFG 406
Query: 355 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 414
G + M + ++++ Q ++++ +MDSMT EE D P L+ SRI RIARGSG ++
Sbjct: 407 GMGN--MSRAQKQQMQGNLEKFRVIMDSMTQEEKD--QPHLLKSSRIRRIARGSGVYEKD 462
Query: 415 VMEMLEEYKRLAKIWSKMK 433
V E+L ++ R K+ MK
Sbjct: 463 VKELLTQWNRSRKMMRGMK 481
>gi|331701481|ref|YP_004398440.1| signal recognition particle protein [Lactobacillus buchneri NRRL
B-30929]
gi|406027042|ref|YP_006725874.1| signal recognition particle protein [Lactobacillus buchneri CD034]
gi|329128824|gb|AEB73377.1| signal recognition particle protein [Lactobacillus buchneri NRRL
B-30929]
gi|405125531|gb|AFS00292.1| signal recognition particle protein [Lactobacillus buchneri CD034]
Length = 479
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/441 (32%), Positives = 242/441 (54%), Gaps = 12/441 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L + EI ALL+ADV F++VR+ +++ N + G N + I + + EL K +
Sbjct: 28 LRATMREIRLALLEADVNFQVVRDFVKTVEERANGAKVLEGLNPSQQIVKIVDEELTKTM 87
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAY-YHQKKGWKPALVCADTFRAGAFD 146
+ P++IM GLQG+GKTTT K A ++ +P L+ D +R A D
Sbjct: 88 GEEAVPLNKAEKIPTIIMMSGLQGAGKTTTAGKLALKLKNEQNARPLLIADDIYRPAAID 147
Query: 147 QLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMR 206
QL+ + +P + T+ DPV IA GVE K+++ D +I+DT+GR + + L +E+
Sbjct: 148 QLQTVGQQIDVPVFSLGTDVDPVEIAKRGVEQAKQDHNDYVIIDTAGRLQIDEKLMDELS 207
Query: 207 QVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 266
+ +A P+ ++ V+D+ GQ A A+ F +++ V V++TK+DG +GG ALS A T
Sbjct: 208 HIKDAVEPNEILLVIDAMTGQNAVATAEGFNKTLDVTGVVLTKLDGDTRGGAALSIRAVT 267
Query: 267 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 326
+ P+ F+G GE M + +VF SR+LGMGD ++K + Q EL +K+ E
Sbjct: 268 QKPIKFVGQGEKMSDLDVFYPDRMASRILGMGDMLSLIEKTQKEYDEKQAQELSEKIQEN 327
Query: 327 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYM-TMMDSMTN 385
F +Q I KMGP+ ++ M+PG ++ P+ + K ++ ++ SMT+
Sbjct: 328 TFDFNDFVDQLNQIQKMGPLDEIMKMIPGMANN--PQLKNANMDPKDMDHLKAIVYSMTD 385
Query: 386 EELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSA 445
+E ++P ++N SR RIARGSGR ++EV M++++ ++ + +K+ KG MS
Sbjct: 386 QE--RTDPDVLNPSRRRRIARGSGRPIQEVNRMIKQFGQMKTMMNKV------SKGNMSG 437
Query: 446 LSRNMNAQHMSKVLPQGMLKQ 466
+ MN+ M + + +KQ
Sbjct: 438 MENMMNSTGMGGKMSKLAMKQ 458
>gi|289578454|ref|YP_003477081.1| signal recognition particle protein [Thermoanaerobacter italicus
Ab9]
gi|289528167|gb|ADD02519.1| signal recognition particle protein [Thermoanaerobacter italicus
Ab9]
Length = 446
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/426 (34%), Positives = 232/426 (54%), Gaps = 13/426 (3%)
Query: 23 IDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV----NLDDLAAGHNKRRIIQQA 78
+ EK + E + E+ ALL+ADV FK+V++ ++ + ++ L G +I+
Sbjct: 23 LTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESLTPGQQVIKIVN-- 80
Query: 79 IFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCAD 138
+EL ++ + P+VIM VGLQGSGKTT C K A +K+G P LV D
Sbjct: 81 --DELIALMGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACD 138
Query: 139 TFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQE 198
R A QL+ +P + +++PV IA ++ + N D+II+DT+GR +
Sbjct: 139 VVRPAAIKQLQVVGANVNVPVFTMGDKANPVDIAKASIDYARSHNSDVIIIDTAGRLHID 198
Query: 199 AALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGG 258
L EE+ + A PD ++ V+D+ GQ A + A +F + + + V++TK+DG +GG
Sbjct: 199 EELMEELVNIKRAVQPDEILLVVDAMTGQDAVNVASSFNERLDITGVVLTKLDGDTRGGA 258
Query: 259 ALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPE 318
ALS A T+ P+ ++GTGE + + E F SR+LGMGD ++K + + E
Sbjct: 259 ALSIKAVTQKPIKYVGTGEKLTDLEPFYPNRMASRILGMGDVLTLIEKAQAAIDEKKAQE 318
Query: 319 LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMT 378
L QKL FTL EQ Q++ MGP+ Q+ SM+PG + ++ S+ +KR
Sbjct: 319 LGQKLLTKQFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLK--NVDISEKDLKRIEA 376
Query: 379 MMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGL-KI 437
++ SMT EE NP ++N SR RIA+GSG +++V +L++++ K+ K + K
Sbjct: 377 IIQSMTKEE--RQNPSIINGSRKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADIDKD 434
Query: 438 PKKGEM 443
KKG+M
Sbjct: 435 LKKGKM 440
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,139,574,434
Number of Sequences: 23463169
Number of extensions: 290316641
Number of successful extensions: 971693
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9751
Number of HSP's successfully gapped in prelim test: 1308
Number of HSP's that attempted gapping in prelim test: 937529
Number of HSP's gapped (non-prelim): 13324
length of query: 494
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 347
effective length of database: 8,910,109,524
effective search space: 3091808004828
effective search space used: 3091808004828
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)