Query 011077
Match_columns 494
No_of_seqs 302 out of 1069
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 20:19:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011077.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011077hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hks_A Heat-shock transcriptio 100.0 5.5E-39 1.9E-43 279.1 7.5 95 10-104 2-106 (106)
2 2ldu_A Heat shock factor prote 100.0 1.7E-38 5.9E-43 283.6 9.2 103 5-107 10-123 (125)
3 3hts_B Heat shock transcriptio 100.0 1.7E-32 5.8E-37 236.8 5.0 83 7-89 7-100 (102)
4 4avp_A ETS translocation varia 92.3 0.15 5.3E-06 44.0 4.9 74 13-86 12-90 (106)
5 2ypr_A Protein FEV; transcript 88.3 0.41 1.4E-05 41.0 4.1 75 12-86 7-86 (102)
6 2dao_A Transcription factor ET 88.3 0.68 2.3E-05 40.7 5.5 80 7-86 3-88 (118)
7 1yo5_C SAM pointed domain cont 87.1 0.38 1.3E-05 40.9 3.2 72 4-75 2-76 (97)
8 1fli_A FLI-1; transcription/DN 87.0 0.48 1.6E-05 40.4 3.7 62 12-73 5-67 (98)
9 1awc_A Protein (GA binding pro 86.6 0.46 1.6E-05 41.2 3.5 58 17-74 5-63 (110)
10 1bc8_C SAP-1, protein (SAP-1 E 85.1 0.37 1.3E-05 40.7 2.1 76 12-87 4-84 (93)
11 1wwx_A E74-like factor 5 ESE-2 85.0 0.88 3E-05 39.3 4.4 79 7-86 3-88 (107)
12 1hbx_G ETS-domain protein ELK- 83.8 1.2 3.9E-05 40.9 4.8 76 12-87 5-85 (157)
13 2nny_A C-ETS-1 protein, P54; p 83.3 1.2 4E-05 41.5 4.7 76 11-86 63-143 (171)
14 1gvj_A C-ETS-1 protein, P54; t 83.1 0.92 3.2E-05 41.2 3.9 77 10-86 37-118 (146)
15 2jee_A YIIU; FTSZ, septum, coi 80.6 11 0.00037 31.0 9.0 49 133-181 25-73 (81)
16 3jtg_A ETS-related transcripti 79.8 1.3 4.5E-05 37.9 3.5 73 14-86 6-85 (103)
17 1kd8_B GABH BLL, GCN4 acid bas 71.0 8.1 0.00028 27.0 4.9 27 132-158 5-31 (36)
18 2lf8_A Transcription factor ET 70.2 1.2 4E-05 39.6 0.0 37 16-52 8-45 (128)
19 1deb_A APC protein, adenomatou 66.8 25 0.00086 26.4 7.1 37 133-169 8-44 (54)
20 1kd8_A GABH AIV, GCN4 acid bas 66.4 12 0.0004 26.2 4.9 28 132-159 5-32 (36)
21 3m48_A General control protein 66.2 7.5 0.00026 26.7 3.9 25 132-156 4-28 (33)
22 1pue_E Protein (transcription 64.8 3.3 0.00011 34.6 2.3 69 17-86 6-83 (89)
23 2yy0_A C-MYC-binding protein; 60.8 15 0.00051 27.6 5.1 25 135-159 19-43 (53)
24 3c3g_A Alpha/beta peptide with 60.7 11 0.00038 25.9 3.9 24 133-156 5-28 (33)
25 3e98_A GAF domain of unknown f 60.6 23 0.0008 34.3 8.0 77 84-193 40-116 (252)
26 2wt7_A Proto-oncogene protein 60.3 18 0.00063 27.7 5.8 29 133-161 28-56 (63)
27 3c3f_A Alpha/beta peptide with 60.1 11 0.00039 25.9 3.9 25 132-156 5-29 (34)
28 3tnu_B Keratin, type II cytosk 59.4 57 0.0019 28.2 9.5 42 133-174 34-75 (129)
29 1t2k_D Cyclic-AMP-dependent tr 59.0 18 0.0006 27.5 5.4 30 133-162 27-56 (61)
30 2wq1_A General control protein 58.6 13 0.00043 25.6 3.9 24 133-156 5-28 (33)
31 1uo4_A General control protein 57.9 13 0.00044 25.7 3.9 25 132-156 5-29 (34)
32 3he5_B Synzip2; heterodimeric 57.8 30 0.001 25.2 6.0 37 133-176 8-44 (52)
33 2hy6_A General control protein 56.2 14 0.00049 25.4 3.9 25 132-156 5-29 (34)
34 2bni_A General control protein 55.6 15 0.00051 25.4 3.9 25 132-156 5-29 (34)
35 2yy0_A C-MYC-binding protein; 55.4 22 0.00077 26.7 5.3 24 133-156 24-47 (53)
36 2oxj_A Hybrid alpha/beta pepti 55.3 15 0.00052 25.3 3.9 25 132-156 5-29 (34)
37 3hnw_A Uncharacterized protein 55.0 48 0.0016 29.4 8.3 41 136-176 83-123 (138)
38 3tnu_A Keratin, type I cytoske 51.1 56 0.0019 28.4 8.1 41 134-174 37-77 (131)
39 2wt7_B Transcription factor MA 51.1 31 0.0011 28.8 6.0 40 135-174 48-87 (90)
40 4dzn_A Coiled-coil peptide CC- 50.0 22 0.00075 23.7 3.9 24 133-156 7-30 (33)
41 2v66_B Nuclear distribution pr 49.3 1.2E+02 0.004 26.2 9.6 45 144-188 37-81 (111)
42 3q8t_A Beclin-1; autophagy, AT 49.2 91 0.0031 25.9 8.7 46 132-177 8-53 (96)
43 2xdj_A Uncharacterized protein 48.1 43 0.0015 27.4 6.4 24 161-184 39-62 (83)
44 2r2v_A GCN4 leucine zipper; co 47.0 25 0.00084 24.3 3.9 24 133-156 6-29 (34)
45 1jnm_A Proto-oncogene C-JUN; B 42.2 20 0.00068 27.4 3.3 29 133-161 27-55 (62)
46 2dgc_A Protein (GCN4); basic d 42.1 20 0.00068 27.7 3.3 27 132-158 34-60 (63)
47 2xdj_A Uncharacterized protein 41.9 1.3E+02 0.0046 24.4 8.4 33 140-172 25-57 (83)
48 1hjb_A Ccaat/enhancer binding 41.4 37 0.0013 28.0 5.0 24 134-157 42-65 (87)
49 2jee_A YIIU; FTSZ, septum, coi 40.8 1.5E+02 0.0051 24.2 9.6 35 133-167 11-45 (81)
50 3uux_B Mitochondrial division 40.5 1E+02 0.0035 30.0 8.7 66 137-202 151-216 (242)
51 1ci6_A Transcription factor AT 40.0 48 0.0016 25.5 5.2 26 133-158 28-53 (63)
52 3oja_B Anopheles plasmodium-re 39.6 1.3E+02 0.0044 31.6 10.2 43 134-176 508-550 (597)
53 1wt6_A Myotonin-protein kinase 39.4 1E+02 0.0035 25.2 7.1 34 143-176 25-58 (81)
54 4emc_A Monopolin complex subun 37.7 97 0.0033 29.1 7.7 23 153-175 31-53 (190)
55 1g6u_A Domain swapped dimer; d 36.5 1E+02 0.0036 22.0 5.9 7 135-141 7-13 (48)
56 3oja_B Anopheles plasmodium-re 36.1 1.3E+02 0.0044 31.5 9.6 34 140-173 521-554 (597)
57 3hnw_A Uncharacterized protein 35.6 2.2E+02 0.0076 25.0 9.6 39 134-172 67-105 (138)
58 3i00_A HIP-I, huntingtin-inter 35.1 2.2E+02 0.0076 24.6 9.5 40 134-176 14-53 (120)
59 2v71_A Nuclear distribution pr 34.2 2.8E+02 0.0096 25.9 10.4 58 144-201 90-154 (189)
60 3efg_A Protein SLYX homolog; x 34.0 67 0.0023 25.8 5.3 7 134-140 13-19 (78)
61 4dzn_A Coiled-coil peptide CC- 33.9 86 0.003 20.9 4.8 20 136-155 3-22 (33)
62 2w83_C C-JUN-amino-terminal ki 33.0 57 0.002 26.4 4.6 25 133-157 35-59 (77)
63 4etp_A Kinesin-like protein KA 32.6 1.2E+02 0.0041 31.3 8.3 38 139-176 7-44 (403)
64 1nkp_B MAX protein, MYC proto- 31.7 49 0.0017 26.4 4.2 29 137-165 49-77 (83)
65 1nkp_A C-MYC, MYC proto-oncoge 30.9 82 0.0028 25.7 5.5 33 136-168 53-85 (88)
66 3ra3_B P2F; coiled coil domain 30.7 41 0.0014 21.7 2.7 18 137-154 2-19 (28)
67 2v66_B Nuclear distribution pr 30.4 2.6E+02 0.0088 24.0 8.7 46 133-178 40-85 (111)
68 2wt7_B Transcription factor MA 30.0 70 0.0024 26.6 4.9 36 132-167 52-87 (90)
69 1a93_B MAX protein, coiled coi 29.8 77 0.0026 21.9 4.2 17 135-151 14-30 (34)
70 3na7_A HP0958; flagellar bioge 29.2 1.6E+02 0.0055 28.1 8.2 40 135-174 39-78 (256)
71 1gd2_E Transcription factor PA 29.2 59 0.002 25.8 4.1 30 133-162 34-63 (70)
72 2v71_A Nuclear distribution pr 28.9 3E+02 0.01 25.7 9.6 48 134-181 94-141 (189)
73 2aze_A Transcription factor DP 28.0 1.6E+02 0.0056 26.7 7.4 23 135-157 5-27 (155)
74 1gu4_A CAAT/enhancer binding p 28.0 44 0.0015 27.0 3.3 23 134-156 42-64 (78)
75 3cue_D Transport protein parti 27.5 34 0.0012 32.1 2.9 61 14-75 88-157 (193)
76 4etp_A Kinesin-like protein KA 26.3 1.8E+02 0.0061 30.0 8.3 35 133-167 8-42 (403)
77 1dh3_A Transcription factor CR 26.3 48 0.0017 24.8 3.0 24 133-156 27-50 (55)
78 2akf_A Coronin-1A; coiled coil 25.1 1.5E+02 0.0052 19.8 4.8 18 161-178 11-28 (32)
79 3ghg_A Fibrinogen alpha chain; 25.0 1.9E+02 0.0065 31.2 8.2 38 139-176 114-151 (562)
80 1nlw_A MAD protein, MAX dimeri 24.9 87 0.003 25.1 4.5 30 136-165 48-77 (80)
81 3oja_A Leucine-rich immune mol 24.9 2.1E+02 0.0072 29.3 8.7 10 145-154 420-429 (487)
82 3cvf_A Homer-3, homer protein 24.7 2.8E+02 0.0095 22.4 9.6 41 134-174 19-59 (79)
83 3swy_A Cyclic nucleotide-gated 24.3 2.1E+02 0.0072 20.9 7.1 42 133-177 3-44 (46)
84 3cve_A Homer protein homolog 1 23.5 2.8E+02 0.0096 22.1 9.7 39 135-173 14-52 (72)
85 2xu6_A MDV1 coiled coil; prote 23.4 1.2E+02 0.0042 24.2 5.0 38 163-200 21-58 (72)
86 3o0z_A RHO-associated protein 23.2 4.4E+02 0.015 24.2 9.5 45 138-182 93-137 (168)
87 3na7_A HP0958; flagellar bioge 23.0 3.2E+02 0.011 25.9 9.0 36 138-173 35-70 (256)
88 3a7p_A Autophagy protein 16; c 22.7 4.3E+02 0.015 23.9 9.8 23 135-157 68-90 (152)
89 1g6u_A Domain swapped dimer; d 22.6 2.2E+02 0.0074 20.4 6.7 9 140-148 5-13 (48)
90 4ani_A Protein GRPE; chaperone 22.4 2.9E+02 0.0098 26.2 8.3 40 135-174 59-98 (213)
91 1deb_A APC protein, adenomatou 22.4 2.5E+02 0.0085 21.0 8.2 41 137-177 5-45 (54)
92 3swf_A CGMP-gated cation chann 22.0 3.1E+02 0.011 22.0 8.3 44 132-178 4-47 (74)
93 2zqm_A Prefoldin beta subunit 21.7 2.7E+02 0.0093 22.7 7.3 43 132-174 67-109 (117)
94 4e61_A Protein BIM1; EB1-like 21.6 3.6E+02 0.012 23.0 7.9 46 144-189 6-51 (106)
95 3a7p_A Autophagy protein 16; c 21.0 4.3E+02 0.015 23.9 8.7 29 153-181 100-128 (152)
96 1l8d_A DNA double-strand break 20.9 1.9E+02 0.0065 23.7 6.1 37 136-172 4-40 (112)
97 1go4_E MAD1 (mitotic arrest de 20.4 1.7E+02 0.0057 24.8 5.5 33 134-166 11-43 (100)
No 1
>1hks_A Heat-shock transcription factor; transcription regulation; NMR {Drosophila melanogaster} SCOP: a.4.5.22 PDB: 1hkt_A
Probab=100.00 E-value=5.5e-39 Score=279.08 Aligned_cols=95 Identities=40% Similarity=0.827 Sum_probs=91.5
Q ss_pred CCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhHhhhccCcCCCChhhHhhhhhhcCceecC----------
Q 011077 10 NSLPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVD---------- 79 (494)
Q Consensus 10 ~~~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP~yFkh~nfsSFvRQLN~YGFrKv~---------- 79 (494)
+++|+||.|||+||+|+++++||+|+++|++|||+|+.+|+++|||+||||+||+|||||||+||||||.
T Consensus 2 ~~~p~F~~KL~~mv~d~~~~~iI~W~~~G~sFvI~d~~~F~~~vLp~yFkh~n~~SFvRQLN~YGF~Kv~~~~~~~~~~~ 81 (106)
T 1hks_A 2 SGVPAFLAKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKHNNMASFIRQLNMYGFHKITSIDNGGLRFD 81 (106)
T ss_dssp TTCCTTHHHHHHHHSSSTTTTTSEESTTTSCEECSCCSTTTTTTSTTTTSCCCHHHHHHHHHHHCCCCSSCSSSCCSSCT
T ss_pred CCcCcHHHHHHHHhcCCCCCCEEEEeCCCCEEEECCHHHHHHHHhHHhcCCCcHHHHHHhhhcCCCeEEecccccCccCC
Confidence 4689999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred CCCceEecCCcccCccccccccccc
Q 011077 80 PDRYEFANEGFLRGQKHLLKSISRR 104 (494)
Q Consensus 80 ~d~~eF~h~~F~Rg~~~LL~~IkRr 104 (494)
++.|+|+|++|+||+++||.+|+||
T Consensus 82 ~~~~ef~h~~F~Rg~~~LL~~IkRk 106 (106)
T 1hks_A 82 RDEIEFSHPFFKRNSPFLLDQIKRK 106 (106)
T ss_dssp TSTTEECCTTCCSSCTTSTTTCCCC
T ss_pred CCceEEECcCccCcCHHHHhhCcCC
Confidence 5789999999999999999999997
No 2
>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=283.60 Aligned_cols=103 Identities=49% Similarity=0.906 Sum_probs=97.8
Q ss_pred CCCCCCCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhHhhhccCcCCCChhhHhhhhhhcCceecC-----
Q 011077 5 SAANGNSLPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVD----- 79 (494)
Q Consensus 5 s~~~~~~~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP~yFkh~nfsSFvRQLN~YGFrKv~----- 79 (494)
.+.....+++||.|||+||+||++++||+|+++|++|||+|+.+|+++|||+||||+||+|||||||+|||+||.
T Consensus 10 ~~~~~~~~~~F~~KL~~ml~d~~~~~iI~W~~~G~sFvV~d~~~F~~~vLp~yFkh~nfsSFvRQLN~YGF~Kv~~~~~~ 89 (125)
T 2ldu_A 10 HMAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQG 89 (125)
T ss_dssp SCCSSCCCCHHHHHHHHHHHCTTTTTTEEECTTSSEEEECCHHHHHHHHHHHHSSCCCHHHHHHHHHHTTCEEEECSCCS
T ss_pred ccccCCCCCcHHHHHHHHhhCCCCCCEEEEcCCCCEEEEeCHHHHHHHHhHHhcCCCcHHHHHHHhcccCceEEeecccc
Confidence 456778899999999999999999999999999999999999999999999999999999999999999999983
Q ss_pred ------CCCceEecCCcccCcccccccccccccc
Q 011077 80 ------PDRYEFANEGFLRGQKHLLKSISRRKPA 107 (494)
Q Consensus 80 ------~d~~eF~h~~F~Rg~~~LL~~IkRrk~~ 107 (494)
++.|+|+|++|+||+++||.+|+||++.
T Consensus 90 ~~~~~~~~~~eF~H~~F~Rg~~~LL~~IkRk~~~ 123 (125)
T 2ldu_A 90 GLVKPERDDTEFQHPCFLRGQEQLLENIKRKVTS 123 (125)
T ss_dssp SSSSCSSCCEEEECTTCBTTBGGGTTTSCCCTTS
T ss_pred ccccCCCCccEEECccccCCCHHHHhhCcCCCCC
Confidence 4789999999999999999999999875
No 3
>3hts_B Heat shock transcription factor; transcription regulation, DNA-binding protein, complex (WING helix_TURN_ helix-DNA); 1.75A {Kluyveromyces lactis} SCOP: a.4.5.22 PDB: 2hts_A 1fyk_A* 1fym_A 1fyl_A 3hsf_A 1fbu_A 1fbs_A 1fbq_A
Probab=99.97 E-value=1.7e-32 Score=236.82 Aligned_cols=83 Identities=47% Similarity=0.865 Sum_probs=77.7
Q ss_pred CCCCCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhHhhhccCcCCCChhhHhhhhhhcCceecC-------
Q 011077 7 ANGNSLPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVD------- 79 (494)
Q Consensus 7 ~~~~~~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP~yFkh~nfsSFvRQLN~YGFrKv~------- 79 (494)
.+.+.+|+||.|||.||+|+++++||+|+++|++|||+|+.+|+++|||+||||+||+||+||||+||||||.
T Consensus 7 ~~~~~~p~F~~KL~~ml~d~~~~~iI~W~~~G~sfiI~d~~~F~~~VLp~yFkh~nfsSFvRQLN~YGF~Kv~~~~~g~~ 86 (102)
T 3hts_B 7 VGSMARPAFVNKLWSMVNDKSNEKFIHWSTSGESIVVPNRERFVQEVLPKYFKHSNFASFVRQLNMYGWHKVQDVKSGSM 86 (102)
T ss_dssp ---CCSCHHHHHHHHHHHCGGGTTTSEECTTSCSEEESCHHHHHHHTHHHHCSSCCHHHHHHHHHHTTEEECC-------
T ss_pred CCCCCCCcHHHHHHHHhcCCCCCCEEEEeCCCCEEEEcCHHHHHHHHHHHhcCCCcHHHHHHHhhcCCceEeeccccCcc
Confidence 5667899999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred ----CCCceEecCC
Q 011077 80 ----PDRYEFANEG 89 (494)
Q Consensus 80 ----~d~~eF~h~~ 89 (494)
+++|||+|++
T Consensus 87 ~~~~~~~wEF~n~~ 100 (102)
T 3hts_B 87 LSNNDSRWEFENER 100 (102)
T ss_dssp --CCSCCEEEEECC
T ss_pred cCCCcCCeEecCCC
Confidence 6899999986
No 4
>4avp_A ETS translocation variant 1; transcription, transcriptional activation and repression, DN binding protein, E twenty-SIX, erwing sarcoma; 1.82A {Homo sapiens} PDB: 4b06_A
Probab=92.31 E-value=0.15 Score=43.98 Aligned_cols=74 Identities=23% Similarity=0.448 Sum_probs=56.0
Q ss_pred CcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhHhhhc-cCcCCCChhhHhhhhhhc---Cc-eecCCCCceEe
Q 011077 13 PPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTY---GF-RKVDPDRYEFA 86 (494)
Q Consensus 13 ~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~Y---GF-rKv~~d~~eF~ 86 (494)
-....=|.++|+|+++.++|+|...+..|.+.|+++.++.-=. +-=+.-||..+-|-|..| |. +||...+..|.
T Consensus 12 i~LwqFL~~LL~d~~~~~~I~W~~~~~~Fkl~dp~~VA~lWG~rKnkp~M~YeKlSRaLRyYY~kgii~Kv~G~r~vYk 90 (106)
T 4avp_A 12 LQLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYK 90 (106)
T ss_dssp CCHHHHHHHHHHCGGGTTTEEECSSTTEEEESSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSEEECTTCSSEEE
T ss_pred EeHHHHHHHHHcCccCCCCCcccCCCceEEecCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCeEEecCCCeEEEE
Confidence 3455667889999999999999999989999999888875322 222456899999999887 43 56766666554
No 5
>2ypr_A Protein FEV; transcription; 2.64A {Homo sapiens} PDB: 1fli_A
Probab=88.31 E-value=0.41 Score=41.02 Aligned_cols=75 Identities=19% Similarity=0.361 Sum_probs=55.2
Q ss_pred CCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhHhhhc-cCcCCCChhhHhhhhhhc---Cc-eecCCCCceEe
Q 011077 12 LPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTY---GF-RKVDPDRYEFA 86 (494)
Q Consensus 12 ~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~Y---GF-rKv~~d~~eF~ 86 (494)
.-....=|.++|+|+++.++|+|...+.-|.+.|+++.++.-=. +-=+.-||.-+-|-|..| |. +||...+..|.
T Consensus 7 ~i~LwqFLl~LL~d~~~~~~I~W~~~~g~Fkl~dp~~VArlWG~rKnkp~MnYeKlSRaLRyYY~k~ii~Kv~Gkr~vYk 86 (102)
T 2ypr_A 7 QIQLWQFLLELLADRANAGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRYAYR 86 (102)
T ss_dssp SCCHHHHHHHHHTCGGGTTTCEECSSTTEEECSSHHHHHHHHHHHTTCTTCCHHHHHHHHTHHHHTTSEEECSSCSSEEE
T ss_pred cEeHHHHHHHHhcCCCCCCcccccCCCceEEecChHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCcEEecCCCeEEEE
Confidence 34466678899999999999999999999999999888864321 122456899999998887 33 56665555554
No 6
>2dao_A Transcription factor ETV6; ETS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.30 E-value=0.68 Score=40.66 Aligned_cols=80 Identities=16% Similarity=0.318 Sum_probs=58.7
Q ss_pred CCCCCCCcHHHHHHHhccCCCCCCceEEcC-CCCeEEEecCchhhHhhhc-cCcCCCChhhHhhhhhhc---Cc-eecCC
Q 011077 7 ANGNSLPPFLSKIYDMVEDPSTNDIVSWSS-SNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTY---GF-RKVDP 80 (494)
Q Consensus 7 ~~~~~~~~Fl~KLy~mled~~~~~iIsWs~-~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~Y---GF-rKv~~ 80 (494)
++..+....-.=|.++|.|+.+.++|+|.. ++.-|.+.|+++.++.-=. +-=+.-||.-.-|-|..| |+ +||..
T Consensus 3 ~~~~g~~~LwqFLleLL~d~~~~~~I~W~~~~~g~Fklvdp~~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~G 82 (118)
T 2dao_A 3 SGSSGCRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHYYKLNIIRKEPG 82 (118)
T ss_dssp CCCCCCCCHHHHHHHHHHCGGGTTTEEEEEGGGTEEEESCHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHTSEECCSS
T ss_pred CccCcchHHHHHHHHHhCCcccCCceEeeCCCCCeEEEeCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCCEEeccC
Confidence 344456667788899999999999999987 4568999999887765322 222456899999999998 43 56655
Q ss_pred CCceEe
Q 011077 81 DRYEFA 86 (494)
Q Consensus 81 d~~eF~ 86 (494)
.+..|.
T Consensus 83 ~r~vY~ 88 (118)
T 2dao_A 83 QRLLFR 88 (118)
T ss_dssp SSSEEE
T ss_pred CeEEEE
Confidence 565554
No 7
>1yo5_C SAM pointed domain containing ETS transcription factor; protein-DNA complex, double helix, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.4.5.21
Probab=87.12 E-value=0.38 Score=40.90 Aligned_cols=72 Identities=17% Similarity=0.202 Sum_probs=51.4
Q ss_pred CCCCCCCCCCcHHHHHHHhccCCC-CCCceEEcC-CCCeEEEecCchhhHhhhc-cCcCCCChhhHhhhhhhcCc
Q 011077 4 SSAANGNSLPPFLSKIYDMVEDPS-TNDIVSWSS-SNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYGF 75 (494)
Q Consensus 4 ~s~~~~~~~~~Fl~KLy~mled~~-~~~iIsWs~-~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YGF 75 (494)
|..+++++......=|.++|+||+ ..++|+|.. ++.-|.+.|+++-++.-=. +-=+.-||..+-|-|..|--
T Consensus 2 ~~~~~~~~~i~LwqFL~eLL~d~~~~~~~I~W~~~~~g~Fkl~d~~~VArlWG~rKnkp~MnYeklSRaLRyYY~ 76 (97)
T 1yo5_C 2 SLDALGSQPIHLWQFLKELLLKPHSYGRFIRWLNKEKGIFKIEDSAQVARLWGIRKNRPAMNYDKLSRSIRQYYK 76 (97)
T ss_dssp -------CCCCHHHHHHHHHHCHHHHTTTEEEEETTTTEEEESCHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTT
T ss_pred CcCCCCCCeeEHHHHHHHHhcCcccCCCceEeecCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHh
Confidence 445566677778888999999986 589999985 6889999999888775322 22245689999999999854
No 8
>1fli_A FLI-1; transcription/DNA; NMR {Homo sapiens} SCOP: a.4.5.21
Probab=87.04 E-value=0.48 Score=40.37 Aligned_cols=62 Identities=18% Similarity=0.338 Sum_probs=47.5
Q ss_pred CCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhHhhhc-cCcCCCChhhHhhhhhhc
Q 011077 12 LPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTY 73 (494)
Q Consensus 12 ~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~Y 73 (494)
.-....=|.++|+|++..++|+|...+.-|.+.|+++-++.-=. +-=+.-||.-.-|-|..|
T Consensus 5 ~~~LwqFL~~LL~d~~~~~~I~W~~~~g~Fklvd~e~VArlWG~rK~kp~MnYeklSRaLRyY 67 (98)
T 1fli_A 5 QIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYY 67 (98)
T ss_dssp SCCSHHHHHHHHHTCSSCSSEECTTSSSSCEECCHHHHHHHHHHHTCCTTCSSHHHHHHHHHH
T ss_pred ceeHHHHHHHHhcCcccCCCeEEeCCCCEEEEcCHHHHHHHHHhccCCCCcCHHHHHHHHHHH
Confidence 34556667888999999999999999999999999887764321 122456888888888877
No 9
>1awc_A Protein (GA binding protein alpha); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: a.4.5.21
Probab=86.63 E-value=0.46 Score=41.24 Aligned_cols=58 Identities=16% Similarity=0.297 Sum_probs=45.1
Q ss_pred HHHHHhccCCCCCCceEEcCCCCeEEEecCchhhHhhhcc-CcCCCChhhHhhhhhhcC
Q 011077 17 SKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPK-YFKHSNFSSFVRQLNTYG 74 (494)
Q Consensus 17 ~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP~-yFkh~nfsSFvRQLN~YG 74 (494)
.=|.++|+|+++.++|+|...+.-|.+.|+++-++.-=.+ -=+.-||...-|-|..|.
T Consensus 5 qFLleLL~d~~~~~~I~W~~~~geFkl~d~e~VArlWG~rKnkp~MnYeKlSRaLRyYY 63 (110)
T 1awc_A 5 QFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYY 63 (110)
T ss_dssp HHHHHHHTCTTTTTTSEECSSSSEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGG
T ss_pred HHHHHHhcCcccCCceEEeCCCCEEEecCHHHHHHHHHHccCCCCCCHHHHHHHHHHHH
Confidence 3467889999999999999999999999998887653222 223457888888888873
No 10
>1bc8_C SAP-1, protein (SAP-1 ETS domain); DNA-binding domain, winged helix-turn-helix, DNA-binding specificity, transcription/DNA complex; HET: DNA; 1.93A {Homo sapiens} SCOP: a.4.5.21 PDB: 1bc7_C* 1k6o_A 1dux_C*
Probab=85.12 E-value=0.37 Score=40.68 Aligned_cols=76 Identities=17% Similarity=0.376 Sum_probs=56.4
Q ss_pred CCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhHhhhc-cCcCCCChhhHhhhhhhcC---c-eecCCCCceEe
Q 011077 12 LPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYG---F-RKVDPDRYEFA 86 (494)
Q Consensus 12 ~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YG---F-rKv~~d~~eF~ 86 (494)
.-....=|.++|.|++..++|+|...+.-|.+.|+++-++.-=. +-=+.-||...-|-|..|- + +||...+..|.
T Consensus 4 ~i~Lw~FL~~LL~d~~~~~~I~W~~~~g~Fkl~d~~~VArlWG~rKnk~~MnYeklSRaLRyYY~~~il~Kv~g~r~vY~ 83 (93)
T 1bc8_C 4 AITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYK 83 (93)
T ss_dssp CCCHHHHHHHHTTCGGGTTTSEECSSSSEEECTTHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHTSEEECTTSTTEEE
T ss_pred cccHHHHHHHHhcCcccCCceEEeCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHhcCcEEecCCCeEEEE
Confidence 34556678899999999999999998889999999888775322 2224568999999998873 3 45655565554
Q ss_pred c
Q 011077 87 N 87 (494)
Q Consensus 87 h 87 (494)
.
T Consensus 84 F 84 (93)
T 1bc8_C 84 F 84 (93)
T ss_dssp E
T ss_pred e
Confidence 3
No 11
>1wwx_A E74-like factor 5 ESE-2B; DNA binding, transcriptional activation and repression, structural genomics; NMR {Homo sapiens} SCOP: a.4.5.21
Probab=85.00 E-value=0.88 Score=39.33 Aligned_cols=79 Identities=18% Similarity=0.317 Sum_probs=56.2
Q ss_pred CCCCCCCcHHHHHHHhccCCC-CCCceEEcC-CCCeEEEecCchhhHhhhc-cCcCCCChhhHhhhhhhcC----ceecC
Q 011077 7 ANGNSLPPFLSKIYDMVEDPS-TNDIVSWSS-SNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYG----FRKVD 79 (494)
Q Consensus 7 ~~~~~~~~Fl~KLy~mled~~-~~~iIsWs~-~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YG----FrKv~ 79 (494)
+++++...+..=|.++|.|++ ..++|+|.. +..-|.+.|+++.++.-=. +-=..-||..+-|-|..|- .+||+
T Consensus 3 sg~~g~i~LwqFL~eLL~d~~~~~~~I~W~~~~~g~Fkl~d~e~VArlWG~rKnkp~MnYeKlSRaLRyYY~~~ii~Kv~ 82 (107)
T 1wwx_A 3 SGSSGSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVD 82 (107)
T ss_dssp CCCCSSCCHHHHHHHHHHCTTTCCSCCEEEETTTTEEECSCHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHTSEECCS
T ss_pred CCCCCcEEHHHHHHHHHcCcccCCCcEEeecCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHhcCcEEecc
Confidence 345556778888999999986 568999987 4689999999888775321 1224568999999998873 24554
Q ss_pred CCCceEe
Q 011077 80 PDRYEFA 86 (494)
Q Consensus 80 ~d~~eF~ 86 (494)
.+..|.
T Consensus 83 -~rlvY~ 88 (107)
T 1wwx_A 83 -RRLVYK 88 (107)
T ss_dssp -SSSEEE
T ss_pred -ceEEEE
Confidence 455554
No 12
>1hbx_G ETS-domain protein ELK-4; gene regulation, transcription complex; 3.15A {Homo sapiens} SCOP: a.4.5.21
Probab=83.83 E-value=1.2 Score=40.92 Aligned_cols=76 Identities=17% Similarity=0.376 Sum_probs=56.3
Q ss_pred CCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhHhhhc-cCcCCCChhhHhhhhhhcC---c-eecCCCCceEe
Q 011077 12 LPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYG---F-RKVDPDRYEFA 86 (494)
Q Consensus 12 ~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YG---F-rKv~~d~~eF~ 86 (494)
.-....=|.++|.|++..++|+|...+.-|.+.|+++-++..=. +-=..-||..+-|-|..|- + +||...+..|.
T Consensus 5 ~i~LWqFLleLL~d~~~~~~I~Wt~~~geFklvdpe~VArLWG~rKnkp~MnYeKLSRALRyYY~k~Ii~KV~GqrlvYk 84 (157)
T 1hbx_G 5 AITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYK 84 (157)
T ss_dssp CCCHHHHTTTSSSCGGGTTTEEECSSSSCEEETTHHHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEECSSCTTEEE
T ss_pred cccHHHHHHHHhcCcccCCceEEeCCCCEEEecCcHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCcEEecCCCeEEEe
Confidence 34455667889999999999999998889999999888875322 2224568999999998873 3 45655565554
Q ss_pred c
Q 011077 87 N 87 (494)
Q Consensus 87 h 87 (494)
.
T Consensus 85 F 85 (157)
T 1hbx_G 85 F 85 (157)
T ss_dssp E
T ss_pred e
Confidence 3
No 13
>2nny_A C-ETS-1 protein, P54; protein-DNA complex, transcription/DNA complex; 2.58A {Homo sapiens} PDB: 3ri4_A 3mfk_A 1mdm_B
Probab=83.26 E-value=1.2 Score=41.46 Aligned_cols=76 Identities=20% Similarity=0.308 Sum_probs=56.4
Q ss_pred CCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhHhhhc-cCcCCCChhhHhhhhhhcCce----ecCCCCceE
Q 011077 11 SLPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYGFR----KVDPDRYEF 85 (494)
Q Consensus 11 ~~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YGFr----Kv~~d~~eF 85 (494)
+......=|.++|.|+...++|+|...+.-|.+.|+++-++..=. +-=+.-||.-.-|-|..|-=+ ||...+..|
T Consensus 63 g~i~LwqFLleLL~d~~~~~~I~Wt~~~~eFklvdpe~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~GkrlvY 142 (171)
T 2nny_A 63 GPIQLWQFLLELLTDKSSQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVY 142 (171)
T ss_dssp SSCCHHHHHHHHHTCTGGGGTCEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGGTTTSEEECTTSTTEE
T ss_pred CceeHHHHHHHHhcCcccCCceEeeCCCCEEEeCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCcEeecCCCeEEE
Confidence 455666778899999999999999999999999999888875322 222345788999999888443 555555555
Q ss_pred e
Q 011077 86 A 86 (494)
Q Consensus 86 ~ 86 (494)
.
T Consensus 143 ~ 143 (171)
T 2nny_A 143 R 143 (171)
T ss_dssp E
T ss_pred E
Confidence 4
No 14
>1gvj_A C-ETS-1 protein, P54; transcription, autoinhibition, ETS domain; 1.53A {Homo sapiens} SCOP: a.4.5.21 PDB: 1md0_A 1r36_A 1k78_B 1k79_A* 1k7a_A* 2stt_A* 2stw_A*
Probab=83.11 E-value=0.92 Score=41.16 Aligned_cols=77 Identities=19% Similarity=0.291 Sum_probs=58.2
Q ss_pred CCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhHhhhc-cCcCCCChhhHhhhhhhcCc----eecCCCCce
Q 011077 10 NSLPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYGF----RKVDPDRYE 84 (494)
Q Consensus 10 ~~~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YGF----rKv~~d~~e 84 (494)
++......=|.++|+|+...++|+|...+.-|.+.|+++-++..=. +-=+.-||.-.-|-|..|-= +||...+..
T Consensus 37 sg~i~LwqFLleLL~d~~~~~~I~Wt~~~~eFklvdpe~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~Gkrlv 116 (146)
T 1gvj_A 37 SGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYV 116 (146)
T ss_dssp CCSCCHHHHHHHHHTCGGGTTTSEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHTTSEEECTTSSSE
T ss_pred CCceeHHHHHHHHhcCcccCCceEeeCCCCEEEeCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCcEEecCCCeEE
Confidence 4566777788899999999999999999999999999888875322 22235589999999988743 356555555
Q ss_pred Ee
Q 011077 85 FA 86 (494)
Q Consensus 85 F~ 86 (494)
|.
T Consensus 117 Y~ 118 (146)
T 1gvj_A 117 YR 118 (146)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 15
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=80.64 E-value=11 Score=30.99 Aligned_cols=49 Identities=27% Similarity=0.365 Sum_probs=30.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQ 181 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE~rQqq 181 (494)
|..||+.||.++..|.+|...++........+.+.|.+.......|-+.
T Consensus 25 LqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~ 73 (81)
T 2jee_A 25 LQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQA 73 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4557788888888877777776665555555555555555544444333
No 16
>3jtg_A ETS-related transcription factor ELF-3; ELF3, protein-DNA complex, type II TGF-beta receptor, activa alternative splicing, cytoplasm; HET: DNA; 2.20A {Mus musculus} SCOP: a.4.5.21
Probab=79.81 E-value=1.3 Score=37.92 Aligned_cols=73 Identities=15% Similarity=0.306 Sum_probs=50.9
Q ss_pred cHHHHHHHhccCCC-CCCceEEcCC-CCeEEEecCchhhHhhhc-cCcCCCChhhHhhhhhhcC---c-eecCCCCceEe
Q 011077 14 PFLSKIYDMVEDPS-TNDIVSWSSS-NNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYG---F-RKVDPDRYEFA 86 (494)
Q Consensus 14 ~Fl~KLy~mled~~-~~~iIsWs~~-G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YG---F-rKv~~d~~eF~ 86 (494)
....=|.++|.|++ ..++|+|... ..-|.+.|+++.++.-=. +-=..-||..+-|-|..|- . +||...+..|.
T Consensus 6 ~LwqFL~~LL~d~~~~~~~I~W~~~~~g~Fkl~dp~~VArlWG~rKnkp~MnYeKlSRaLRyYy~~~ii~Kv~G~r~vY~ 85 (103)
T 3jtg_A 6 HLWEFIRDILIHPELNEGLMKWENRHEGVFKFLRSEAVAQLWGQKKKNSNMTYEKLSRAMRYYYKREILERVDGRRLVYK 85 (103)
T ss_dssp SHHHHHHHHHTCGGGCSSCEEEEETTTTEEEESSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHTTSBCCCTTCTTEEE
T ss_pred cHHHHHHHHHcCcccCCCccccccCCCceEEecCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCcEEecCCceEEEE
Confidence 44556778899998 6789999985 569999999888865221 1124668999999998872 2 44554555443
No 17
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=71.00 E-value=8.1 Score=26.98 Aligned_cols=27 Identities=30% Similarity=0.384 Sum_probs=23.7
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 132 GLEEEVEILKRDKNVLMQELVRLRQQQ 158 (494)
Q Consensus 132 ~Le~Eie~LKrDk~~L~qEL~~LRQqQ 158 (494)
.|++.++.|...+..|..||.|||...
T Consensus 5 QLE~KVEeLl~~~~~Le~eV~RLk~ll 31 (36)
T 1kd8_B 5 QLKAKVEELKSKLWHLKNKVARLKKKN 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 378999999999999999999998654
No 18
>2lf8_A Transcription factor ETV6; auto-inhibition; NMR {Mus musculus}
Probab=70.20 E-value=1.2 Score=39.65 Aligned_cols=37 Identities=14% Similarity=0.413 Sum_probs=29.5
Q ss_pred HHHHHHhccCCCCCCceEEcCCC-CeEEEecCchhhHh
Q 011077 16 LSKIYDMVEDPSTNDIVSWSSSN-NSFIVWKVAEFSRD 52 (494)
Q Consensus 16 l~KLy~mled~~~~~iIsWs~~G-~sFvI~d~~~F~~~ 52 (494)
-.=|.++|+|+++.++|+|...+ .-|.+.|+++.++.
T Consensus 8 WqFLleLL~d~~~~~~I~Wt~k~~geFklvdpe~VArl 45 (128)
T 2lf8_A 8 WDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARL 45 (128)
Confidence 34567889999999999998854 58999999766653
No 19
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=66.77 E-value=25 Score=26.39 Aligned_cols=37 Identities=24% Similarity=0.250 Sum_probs=21.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVG 169 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~ 169 (494)
|-.+++.||+++..|.+||..--.+...+++.-.+|.
T Consensus 8 L~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mK 44 (54)
T 1deb_A 8 LLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMK 44 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHH
Confidence 4456777777777777776655544444444444333
No 20
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=66.40 E-value=12 Score=26.22 Aligned_cols=28 Identities=32% Similarity=0.414 Sum_probs=24.0
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 132 GLEEEVEILKRDKNVLMQELVRLRQQQQ 159 (494)
Q Consensus 132 ~Le~Eie~LKrDk~~L~qEL~~LRQqQ~ 159 (494)
.|+++++.|-.++..|..||.|||.-..
T Consensus 5 QLE~kVEeLl~~~~~Le~EV~RL~~ll~ 32 (36)
T 1kd8_A 5 QLEAEVEEIESEVWHLENEVARLEKENA 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 3789999999999999999999986543
No 21
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=66.23 E-value=7.5 Score=26.71 Aligned_cols=25 Identities=36% Similarity=0.407 Sum_probs=22.4
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 132 GLEEEVEILKRDKNVLMQELVRLRQ 156 (494)
Q Consensus 132 ~Le~Eie~LKrDk~~L~qEL~~LRQ 156 (494)
.|+++++.|-.++..|..||.+|+.
T Consensus 4 QLE~kVEeLl~~n~~Le~EV~RLk~ 28 (33)
T 3m48_A 4 QLEAKVEELLSKNWNLENEVARLKK 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3789999999999999999999974
No 22
>1pue_E Protein (transcription factor PU.1 (TF PU.1)); complex (transcription regulating/DNA), oncogene, transforming protein, DNA- binding, activator; HET: DNA; 2.10A {Mus musculus} SCOP: a.4.5.21
Probab=64.83 E-value=3.3 Score=34.60 Aligned_cols=69 Identities=16% Similarity=0.336 Sum_probs=47.4
Q ss_pred HHHHHhccCCCCCCceEEcCC-CCeEEEe--cCchhhHhhhcc--CcCCCChhhHhhhhhhcC---c-eecCCCCceEe
Q 011077 17 SKIYDMVEDPSTNDIVSWSSS-NNSFIVW--KVAEFSRDLLPK--YFKHSNFSSFVRQLNTYG---F-RKVDPDRYEFA 86 (494)
Q Consensus 17 ~KLy~mled~~~~~iIsWs~~-G~sFvI~--d~~~F~~~vLP~--yFkh~nfsSFvRQLN~YG---F-rKv~~d~~eF~ 86 (494)
.=|.++|+|+++.++|+|... ..-|-+. |+++-++.-=.+ .=+.-||...-|-|..|. . +||. .+..|.
T Consensus 6 qFL~~LL~d~~~~~~I~W~~~~~g~Fk~~~~~~e~VArlWG~rK~Nk~~MnYeKlSRaLRyYY~~~ii~Kv~-~r~vY~ 83 (89)
T 1pue_E 6 QFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKMARALRNYGKTGEVKKVK-KKLTYQ 83 (89)
T ss_dssp HHHHHHHHHTCCTTTEEEEETTTTEEEECTTTHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHSSEEECS-STTEEE
T ss_pred HHHHHHhcCcccCCceEeecCCCcEEEEecCChHHHHHHhhcccCCCCCcCHHHHHHHHHHHHHcCceeecc-ceEEEe
Confidence 447788999999999999874 4678775 677777653222 223668999999998873 2 4554 455543
No 23
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=60.80 E-value=15 Score=27.64 Aligned_cols=25 Identities=12% Similarity=0.317 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 135 EEVEILKRDKNVLMQELVRLRQQQQ 159 (494)
Q Consensus 135 ~Eie~LKrDk~~L~qEL~~LRQqQ~ 159 (494)
.+++.||.++..|.+++..|+++..
T Consensus 19 ~d~eaLk~E~~eLk~k~~~L~~~~~ 43 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYEAIVEENK 43 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666666666655555555554443
No 24
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=60.72 E-value=11 Score=25.86 Aligned_cols=24 Identities=13% Similarity=0.267 Sum_probs=21.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQ 156 (494)
|+++++.|-.++..|..||.+||.
T Consensus 5 LEdKvEeLl~~~~~Le~EV~RLk~ 28 (33)
T 3c3g_A 5 IEXKLXEIXSKXYHXENXLARIKX 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHH
Confidence 788999999999999999999874
No 25
>3e98_A GAF domain of unknown function; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.43A {Pseudomonas aeruginosa}
Probab=60.59 E-value=23 Score=34.26 Aligned_cols=77 Identities=8% Similarity=0.104 Sum_probs=30.1
Q ss_pred eEecCCcccCcccccccccccccccccCCCCcccccCCCCcceecccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 84 EFANEGFLRGQKHLLKSISRRKPAQVHGQQQPKLQNSSVGACVEVGKYGLEEEVEILKRDKNVLMQELVRLRQQQQATDR 163 (494)
Q Consensus 84 eF~h~~F~Rg~~~LL~~IkRrk~~~~~~~~~~~~~~~~~~~~~E~~~~~Le~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ 163 (494)
-=.||.|.-.+++||..++=.-+..+ ... | ...++.+||++.+.++.
T Consensus 40 L~~~PdFf~~~~~Ll~~L~lph~~~~------------aVS--------L-------------~erQ~~~LR~r~~~Le~ 86 (252)
T 3e98_A 40 LSQHPEFFVEHDELIPELRIPHQPGD------------AVS--------L-------------VERQVRLLRERNIEMRH 86 (252)
T ss_dssp ---------------------------------------CH--------H-------------HHHHHHHHHHHHHHHHH
T ss_pred HHhCCHHHhhCHHHHHhCCCCCCCCC------------ccc--------H-------------HHHHHHHHHHHHHHHHH
Confidence 34799999999999998853222110 001 1 11224456666666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 011077 164 QLHTVGQRVQVMEQRQQQMMSFLAKAMHSP 193 (494)
Q Consensus 164 ql~~l~~Rl~~mE~rQqqmmsfLak~lq~p 193 (494)
++..|.+.-+.-+.-.+++..+..+++...
T Consensus 87 ~L~~Li~~A~~Ne~l~~~~~~l~l~LL~a~ 116 (252)
T 3e98_A 87 RLSQLMDVARENDRLFDKTRRLVLDLLDAT 116 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 777777777666666677777666666554
No 26
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=60.28 E-value=18 Score=27.74 Aligned_cols=29 Identities=24% Similarity=0.440 Sum_probs=20.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQQQQAT 161 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQqQ~~~ 161 (494)
|+.+++.|+.++..|..||..|+++...+
T Consensus 28 Le~~v~~L~~~n~~L~~ei~~L~~e~~~L 56 (63)
T 2wt7_A 28 LQAETDQLEDEKSALQTEIANLLKEKEKL 56 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777888888888877777776655433
No 27
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=60.09 E-value=11 Score=25.92 Aligned_cols=25 Identities=16% Similarity=0.230 Sum_probs=22.1
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 132 GLEEEVEILKRDKNVLMQELVRLRQ 156 (494)
Q Consensus 132 ~Le~Eie~LKrDk~~L~qEL~~LRQ 156 (494)
.|+++++.|-.++..|..||.+||.
T Consensus 5 QLEdKVEeLl~~~~~Le~EV~RLk~ 29 (34)
T 3c3f_A 5 QIEXKLEXILSXLYHXENEXARIXK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 3788999999999999999999874
No 28
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=59.44 E-value=57 Score=28.23 Aligned_cols=42 Identities=17% Similarity=0.214 Sum_probs=35.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQV 174 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~ 174 (494)
...||..|++..+.|..||..++.+...++..|.++..|...
T Consensus 34 ~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~ 75 (129)
T 3tnu_B 34 TKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGEL 75 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999988888888888888777643
No 29
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=58.98 E-value=18 Score=27.54 Aligned_cols=30 Identities=27% Similarity=0.272 Sum_probs=20.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQQQQATD 162 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQqQ~~~e 162 (494)
|+.+++.|..++..|..||..|+.+...+.
T Consensus 27 Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk 56 (61)
T 1t2k_D 27 LEKKAEDLSSLNGQLQSEVTLLRNEVAQLK 56 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567777777777777777777776654433
No 30
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=58.62 E-value=13 Score=25.57 Aligned_cols=24 Identities=21% Similarity=0.196 Sum_probs=21.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQ 156 (494)
|+++|+.|-..+..|..||.+|+.
T Consensus 5 LEdKVEell~~~~~le~EV~Rl~~ 28 (33)
T 2wq1_A 5 LEDKIEENTSKIYHNTNEIARNTK 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHH
Confidence 788999999999999999999874
No 31
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=57.86 E-value=13 Score=25.68 Aligned_cols=25 Identities=20% Similarity=0.312 Sum_probs=22.2
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 132 GLEEEVEILKRDKNVLMQELVRLRQ 156 (494)
Q Consensus 132 ~Le~Eie~LKrDk~~L~qEL~~LRQ 156 (494)
.|+++++.|=.++..|.+||.||+.
T Consensus 5 QLEdKVEeLl~~n~~Le~EV~RLk~ 29 (34)
T 1uo4_A 5 QIEDKGEEILSKLYHIENELARIKK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3789999999999999999999975
No 32
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=57.77 E-value=30 Score=25.18 Aligned_cols=37 Identities=19% Similarity=0.346 Sum_probs=22.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE 176 (494)
|...|.+||+|+-.|.+.- +.++.-+.+|...+.++|
T Consensus 8 lrkkiarlkkdnlqlerde-------qnlekiianlrdeiarle 44 (52)
T 3he5_B 8 LRKKIARLKKDNLQLERDE-------QNLEKIIANLRDEIARLE 44 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhhhhhH-------hhHHHHHHHHHHHHHHHH
Confidence 5678888998876554332 344555555555555554
No 33
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=56.20 E-value=14 Score=25.43 Aligned_cols=25 Identities=28% Similarity=0.348 Sum_probs=22.2
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 132 GLEEEVEILKRDKNVLMQELVRLRQ 156 (494)
Q Consensus 132 ~Le~Eie~LKrDk~~L~qEL~~LRQ 156 (494)
.|++.++.|-..+..|..||.+|+.
T Consensus 5 QLEdkVEeLl~~~~~Le~eV~RL~~ 29 (34)
T 2hy6_A 5 QLADAVEELASANYHLANAVARLAK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3789999999999999999999974
No 34
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=55.61 E-value=15 Score=25.39 Aligned_cols=25 Identities=20% Similarity=0.442 Sum_probs=22.2
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 132 GLEEEVEILKRDKNVLMQELVRLRQ 156 (494)
Q Consensus 132 ~Le~Eie~LKrDk~~L~qEL~~LRQ 156 (494)
.|++.++.|-..+..|..||.+||.
T Consensus 5 QLEdKvEeLl~~~~~L~~EV~RLk~ 29 (34)
T 2bni_A 5 QIEDKLEEILSKGHHICNELARIKK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHH
Confidence 3789999999999999999999975
No 35
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=55.37 E-value=22 Score=26.66 Aligned_cols=24 Identities=21% Similarity=0.339 Sum_probs=11.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQ 156 (494)
|..|++.||...+.|..++..|+.
T Consensus 24 Lk~E~~eLk~k~~~L~~~~~el~~ 47 (53)
T 2yy0_A 24 LRLELAEMKEKYEAIVEENKKLKA 47 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555555444443
No 36
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=55.28 E-value=15 Score=25.32 Aligned_cols=25 Identities=32% Similarity=0.390 Sum_probs=22.0
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 132 GLEEEVEILKRDKNVLMQELVRLRQ 156 (494)
Q Consensus 132 ~Le~Eie~LKrDk~~L~qEL~~LRQ 156 (494)
.|++.++.|-.+++.|..|+.+||.
T Consensus 5 QLE~kVEeLl~~n~~Le~eV~rLk~ 29 (34)
T 2oxj_A 5 QLEXKVXELLXKNXHLEXEVXRLKX 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 3788999999999999999999874
No 37
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=54.95 E-value=48 Score=29.43 Aligned_cols=41 Identities=10% Similarity=0.280 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 136 EVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (494)
Q Consensus 136 Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE 176 (494)
+++.+.++...|..|++.++-+......++..+.+++..++
T Consensus 83 ~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~ 123 (138)
T 3hnw_A 83 DIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQ 123 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333334444444444444444444444444444433
No 38
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=51.10 E-value=56 Score=28.41 Aligned_cols=41 Identities=20% Similarity=0.204 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQV 174 (494)
Q Consensus 134 e~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~ 174 (494)
..||..|++..+.|..||..++.+...++..|.++..|...
T Consensus 37 k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~ 77 (131)
T 3tnu_A 37 KSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCM 77 (131)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 56777888888888888888877777777777777766543
No 39
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=51.07 E-value=31 Score=28.76 Aligned_cols=40 Identities=18% Similarity=0.280 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 135 EEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQV 174 (494)
Q Consensus 135 ~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~ 174 (494)
.+...|..++..|+.|+..|+++...+...+..+.++++.
T Consensus 48 ~q~~~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~ 87 (90)
T 2wt7_B 48 QQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEK 87 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566666666666666766666666666666655543
No 40
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=50.04 E-value=22 Score=23.75 Aligned_cols=24 Identities=33% Similarity=0.534 Sum_probs=12.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQ 156 (494)
|..||..||++...|.-|+..|+|
T Consensus 7 lkqeiaalkkeiaalkfeiaalkq 30 (33)
T 4dzn_A 7 LKQEIAALKKEIAALKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 344555555555555555555443
No 41
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=49.28 E-value=1.2e+02 Score=26.19 Aligned_cols=45 Identities=16% Similarity=0.231 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 144 KNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMMSFLAK 188 (494)
Q Consensus 144 k~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE~rQqqmmsfLak 188 (494)
.+.|..||..||+....+...+..|.+....+|.......+.|+.
T Consensus 37 ~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD 81 (111)
T 2v66_B 37 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLED 81 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHH
Confidence 455777788888888778888888887777777665555555443
No 42
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=49.17 E-value=91 Score=25.91 Aligned_cols=46 Identities=22% Similarity=0.372 Sum_probs=38.9
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQ 177 (494)
Q Consensus 132 ~Le~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE~ 177 (494)
.++.++..|+.+-..|.+||..|..+...+..+|..+..-...++.
T Consensus 8 ~l~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~~ 53 (96)
T 3q8t_A 8 QLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQ 53 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhh
Confidence 3678899999999999999999999999999999888766665543
No 43
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=48.05 E-value=43 Score=27.36 Aligned_cols=24 Identities=17% Similarity=0.249 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 161 TDRQLHTVGQRVQVMEQRQQQMMS 184 (494)
Q Consensus 161 ~e~ql~~l~~Rl~~mE~rQqqmms 184 (494)
+.-++..+...|..|.++|+.+..
T Consensus 39 LRGqiE~~~~~l~ql~~rQrd~Y~ 62 (83)
T 2xdj_A 39 LRGQIQENQYQLNQVVERQKQILL 62 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444444455555443
No 44
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=47.03 E-value=25 Score=24.31 Aligned_cols=24 Identities=17% Similarity=0.234 Sum_probs=21.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQ 156 (494)
++++++.|-.++..|..||.+|+.
T Consensus 6 ledKvEel~~~~~~l~nEv~Rl~~ 29 (34)
T 2r2v_A 6 VADKLEEVASKLYHNANELARVAK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 688999999999999999999874
No 45
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=42.24 E-value=20 Score=27.37 Aligned_cols=29 Identities=34% Similarity=0.368 Sum_probs=20.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQQQQAT 161 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQqQ~~~ 161 (494)
|+.+++.|..++..|..++..|+.+...+
T Consensus 27 Le~~v~~L~~~n~~L~~~v~~L~~e~~~L 55 (62)
T 1jnm_A 27 LEEKVKTLKAQNSELASTANMLREQVAQL 55 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777888888888887777777655433
No 46
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=42.09 E-value=20 Score=27.74 Aligned_cols=27 Identities=33% Similarity=0.401 Sum_probs=21.3
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 132 GLEEEVEILKRDKNVLMQELVRLRQQQ 158 (494)
Q Consensus 132 ~Le~Eie~LKrDk~~L~qEL~~LRQqQ 158 (494)
.|+.+++.|+.++..|..|+..|+++.
T Consensus 34 ~Le~~v~~L~~eN~~L~~ev~~Lr~~l 60 (63)
T 2dgc_A 34 QLEDKVEELLSKNYHLENEVARLKKLV 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367888888888888888888887653
No 47
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=41.93 E-value=1.3e+02 Score=24.38 Aligned_cols=33 Identities=27% Similarity=0.265 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 140 LKRDKNVLMQELVRLRQQQQATDRQLHTVGQRV 172 (494)
Q Consensus 140 LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl 172 (494)
|....+.|.+||.+||-+.+...++|..|.+|.
T Consensus 25 Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQ 57 (83)
T 2xdj_A 25 LQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQ 57 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 334444555555555555555555555555444
No 48
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=41.41 E-value=37 Score=28.05 Aligned_cols=24 Identities=17% Similarity=0.296 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 134 EEEVEILKRDKNVLMQELVRLRQQ 157 (494)
Q Consensus 134 e~Eie~LKrDk~~L~qEL~~LRQq 157 (494)
..+++.|.+++..|..+|..|+++
T Consensus 42 ~~r~~~Le~EN~~Lr~~v~~L~~E 65 (87)
T 1hjb_A 42 QHKVLELTAENERLQKKVEQLSRE 65 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555555555544433
No 49
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=40.76 E-value=1.5e+02 Score=24.23 Aligned_cols=35 Identities=17% Similarity=0.323 Sum_probs=21.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHT 167 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~ 167 (494)
|+.+|..+=.....|..|+..|+++...+..+.+.
T Consensus 11 LE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e 45 (81)
T 2jee_A 11 LEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQN 45 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556555555666666666666666665555555
No 50
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=40.46 E-value=1e+02 Score=29.96 Aligned_cols=66 Identities=18% Similarity=0.261 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHh
Q 011077 137 VEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMMSFLAKAMHSPSFLSQLVQQ 202 (494)
Q Consensus 137 ie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE~rQqqmmsfLak~lq~p~fl~~lvq~ 202 (494)
+..||+.++.+..++.-|-=+...+...+..+-.+++.+...++.++.-||.+=++-.||..-+-.
T Consensus 151 l~~Lkk~~~~i~~~LelL~IRK~ma~sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~eL~~ 216 (242)
T 3uux_B 151 PSALKSFSQTLVNSLEFLNIQKNSTLSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDNLKQ 216 (242)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 457888888888877666556667888999999999999999999999999999988888766543
No 51
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=40.01 E-value=48 Score=25.47 Aligned_cols=26 Identities=19% Similarity=0.264 Sum_probs=15.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQQQ 158 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQqQ 158 (494)
|+.+++.|+.++..|..++..|+.+.
T Consensus 28 le~~~~~L~~~N~~L~~~i~~L~~E~ 53 (63)
T 1ci6_A 28 LTGECKELEKKNEALKERADSLAKEI 53 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666666666666665555443
No 52
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=39.61 E-value=1.3e+02 Score=31.56 Aligned_cols=43 Identities=16% Similarity=0.214 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (494)
Q Consensus 134 e~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE 176 (494)
+.++..++.+.+.+..++.+++++.+....+++.+.+.+..+|
T Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 550 (597)
T 3oja_B 508 NKVFTHLKERQAFKLRETQARRTEADAKQKETEDLEQENIALE 550 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHhhhhhhcchhhHHhhhHHHH
Confidence 3344444444444444444444444444444444444444443
No 53
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=39.42 E-value=1e+02 Score=25.23 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 143 DKNVLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (494)
Q Consensus 143 Dk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE 176 (494)
-++.+..||.+.|--...++.+|++-..|.+.++
T Consensus 25 AKQ~i~EELs~vr~~ni~~eskL~eae~rn~eL~ 58 (81)
T 1wt6_A 25 TRQSLSREMEAIRTDNQNFASQLREAEARNRDLE 58 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777777777777777777776666655544
No 54
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=37.68 E-value=97 Score=29.12 Aligned_cols=23 Identities=4% Similarity=0.280 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 011077 153 RLRQQQQATDRQLHTVGQRVQVM 175 (494)
Q Consensus 153 ~LRQqQ~~~e~ql~~l~~Rl~~m 175 (494)
.|.++...-+.++..|.++|+..
T Consensus 31 ~L~~ql~~k~~ei~~L~~ql~sl 53 (190)
T 4emc_A 31 VLSEKLDTKATEIKQLQKQIDSL 53 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333333
No 55
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=36.50 E-value=1e+02 Score=22.03 Aligned_cols=7 Identities=43% Similarity=0.653 Sum_probs=2.8
Q ss_pred HHHHHHH
Q 011077 135 EEVEILK 141 (494)
Q Consensus 135 ~Eie~LK 141 (494)
.|+..||
T Consensus 7 selqalk 13 (48)
T 1g6u_A 7 SELQALK 13 (48)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3344444
No 56
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=36.08 E-value=1.3e+02 Score=31.52 Aligned_cols=34 Identities=6% Similarity=0.098 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 140 LKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQ 173 (494)
Q Consensus 140 LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~ 173 (494)
+.++.+.+.+++...+++.+.++.++..|..+++
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~ 554 (597)
T 3oja_B 521 KLRETQARRTEADAKQKETEDLEQENIALEKQLD 554 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhhhhhhcchhhHHhhhHHHHHHHh
Confidence 3333333333333333333333333333333333
No 57
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=35.57 E-value=2.2e+02 Score=25.03 Aligned_cols=39 Identities=8% Similarity=0.058 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRV 172 (494)
Q Consensus 134 e~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl 172 (494)
-.++-.++++...|.+++..+.++...+.+++..+..++
T Consensus 67 adEl~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~ 105 (138)
T 3hnw_A 67 ADDYFKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKA 105 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444444444444444443333
No 58
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=35.07 E-value=2.2e+02 Score=24.62 Aligned_cols=40 Identities=20% Similarity=0.241 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (494)
Q Consensus 134 e~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE 176 (494)
+..|+.|+++.+.|..|+.+++...+..-. .|..|+..+|
T Consensus 14 D~~Ie~Lkreie~lk~ele~l~~E~q~~v~---ql~~~i~~Le 53 (120)
T 3i00_A 14 DHLIERLYREISGLKAQLENMKTESQRVVL---QLKGHVSELE 53 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 567999999999999999999877655444 4445555554
No 59
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=34.18 E-value=2.8e+02 Score=25.90 Aligned_cols=58 Identities=17% Similarity=0.277 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHhcCchHHHHHHH
Q 011077 144 KNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMMSF-------LAKAMHSPSFLSQLVQ 201 (494)
Q Consensus 144 k~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE~rQqqmmsf-------Lak~lq~p~fl~~lvq 201 (494)
.+.|..|+..|+.....+...+..|.+....+|.......+. |-+++-...||..=+.
T Consensus 90 ~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~kln~aiEr~alLE~El~ 154 (189)
T 2v71_A 90 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELD 154 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555555555555555555555555444433333 3344444445544443
No 60
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=34.04 E-value=67 Score=25.83 Aligned_cols=7 Identities=29% Similarity=0.249 Sum_probs=2.7
Q ss_pred HHHHHHH
Q 011077 134 EEEVEIL 140 (494)
Q Consensus 134 e~Eie~L 140 (494)
+..|..|
T Consensus 13 e~Ri~~L 19 (78)
T 3efg_A 13 EARLVEL 19 (78)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3344333
No 61
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=33.91 E-value=86 Score=20.89 Aligned_cols=20 Identities=30% Similarity=0.529 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 011077 136 EVEILKRDKNVLMQELVRLR 155 (494)
Q Consensus 136 Eie~LKrDk~~L~qEL~~LR 155 (494)
||..||.+...|..|+..|+
T Consensus 3 eiaalkqeiaalkkeiaalk 22 (33)
T 4dzn_A 3 EIAALKQEIAALKKEIAALK 22 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 55566666665555555543
No 62
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=33.01 E-value=57 Score=26.44 Aligned_cols=25 Identities=36% Similarity=0.446 Sum_probs=12.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQQ 157 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQq 157 (494)
|-.+++.|--++++|..|+..+++-
T Consensus 35 LI~rvdELt~E~e~l~~El~s~~~~ 59 (77)
T 2w83_C 35 LIAKVDELTCEKDVLQGELEAVKQA 59 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3444555555555555555544443
No 63
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=32.57 E-value=1.2e+02 Score=31.27 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 139 ILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (494)
Q Consensus 139 ~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE 176 (494)
.|+.+...|.+++..|.++.+.++..+..+.+++...|
T Consensus 7 ~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 44 (403)
T 4etp_A 7 ALKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEE 44 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344444444444444444445555555555444
No 64
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=31.66 E-value=49 Score=26.36 Aligned_cols=29 Identities=17% Similarity=0.421 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 137 VEILKRDKNVLMQELVRLRQQQQATDRQL 165 (494)
Q Consensus 137 ie~LKrDk~~L~qEL~~LRQqQ~~~e~ql 165 (494)
|..|+.+...|..|+..|+++...++.+|
T Consensus 49 I~~L~~~~~~l~~e~~~L~~~~~~L~~~l 77 (83)
T 1nkp_B 49 IQYMRRKNHTHQQDIDDLKRQNALLEQQV 77 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555555555555554444444
No 65
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=30.90 E-value=82 Score=25.65 Aligned_cols=33 Identities=15% Similarity=0.264 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 136 EVEILKRDKNVLMQELVRLRQQQQATDRQLHTV 168 (494)
Q Consensus 136 Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l 168 (494)
-|..|+.+...|..|+..|+++++.+..+|+.|
T Consensus 53 YI~~L~~~~~~l~~~~~~L~~~n~~L~~rl~~L 85 (88)
T 1nkp_A 53 YILSVQAEEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456666666666666666766665555555443
No 66
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=30.69 E-value=41 Score=21.71 Aligned_cols=18 Identities=33% Similarity=0.445 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 011077 137 VEILKRDKNVLMQELVRL 154 (494)
Q Consensus 137 ie~LKrDk~~L~qEL~~L 154 (494)
|.+||..+..|.||+..|
T Consensus 2 irrlkqknarlkqeiaal 19 (28)
T 3ra3_B 2 IRRLKQKNARLKQEIAAL 19 (28)
T ss_dssp -CHHHHHHHHHHHHHHHH
T ss_pred hhHHHHhhhHHHHHHHHH
Confidence 345555555555554443
No 67
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=30.35 E-value=2.6e+02 Score=24.03 Aligned_cols=46 Identities=22% Similarity=0.252 Sum_probs=22.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQR 178 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE~r 178 (494)
|..++..|+..+..|..-|..|.|....++.+-......|..||.+
T Consensus 40 Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k 85 (111)
T 2v66_B 40 LEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQR 85 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHH
Confidence 4445555555555555555555555444444444444444444444
No 68
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=29.97 E-value=70 Score=26.61 Aligned_cols=36 Identities=28% Similarity=0.291 Sum_probs=21.8
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHT 167 (494)
Q Consensus 132 ~Le~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~ 167 (494)
.|+.++..|..+.+.|.+|+.++.+....+...+++
T Consensus 52 ~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~ 87 (90)
T 2wt7_B 52 HLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEK 87 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356666666666666666666666665555555544
No 69
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=29.76 E-value=77 Score=21.90 Aligned_cols=17 Identities=29% Similarity=0.583 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011077 135 EEVEILKRDKNVLMQEL 151 (494)
Q Consensus 135 ~Eie~LKrDk~~L~qEL 151 (494)
.+|+.||+.+..|..++
T Consensus 14 qDIddlkrQN~~Le~Qi 30 (34)
T 1a93_B 14 QDIDDLKRQNALLEQQV 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH
Confidence 45555555555544443
No 70
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=29.24 E-value=1.6e+02 Score=28.05 Aligned_cols=40 Identities=15% Similarity=0.216 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 135 EEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQV 174 (494)
Q Consensus 135 ~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~ 174 (494)
.++..++.....+..++..++.++...+..+..+..|+..
T Consensus 39 ~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri~~ 78 (256)
T 3na7_A 39 NDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIAS 78 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444444444444444444444444444444333
No 71
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=29.20 E-value=59 Score=25.77 Aligned_cols=30 Identities=30% Similarity=0.268 Sum_probs=15.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQQQQATD 162 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQqQ~~~e 162 (494)
|+.+|..|...+..|..|...|+++...+.
T Consensus 34 LE~~v~~le~~~~~l~~en~~Lr~~i~~L~ 63 (70)
T 1gd2_E 34 LETQVVTLKELHSSTTLENDQLRQKVRQLE 63 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555555555555555555443333
No 72
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=28.90 E-value=3e+02 Score=25.75 Aligned_cols=48 Identities=21% Similarity=0.230 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQ 181 (494)
Q Consensus 134 e~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE~rQqq 181 (494)
..++..|+..+..|..-|..|-|....++.........+..+|.+-.+
T Consensus 94 q~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~kln~ 141 (189)
T 2v71_A 94 EDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQ 141 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHHHHH
Confidence 334444444444444444444444444444443333334444333333
No 73
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=28.00 E-value=1.6e+02 Score=26.73 Aligned_cols=23 Identities=13% Similarity=0.278 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 011077 135 EEVEILKRDKNVLMQELVRLRQQ 157 (494)
Q Consensus 135 ~Eie~LKrDk~~L~qEL~~LRQq 157 (494)
.+++.|+.++..++..|.+-+++
T Consensus 5 qe~~~Le~Ek~~~~~rI~~K~~~ 27 (155)
T 2aze_A 5 QECQNLEVERQRRLERIKQKQSQ 27 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677777766655544443333
No 74
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=27.98 E-value=44 Score=27.02 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 011077 134 EEEVEILKRDKNVLMQELVRLRQ 156 (494)
Q Consensus 134 e~Eie~LKrDk~~L~qEL~~LRQ 156 (494)
+.+++.|..++..|..+|..|++
T Consensus 42 ~~r~~~L~~eN~~L~~~v~~L~~ 64 (78)
T 1gu4_A 42 QHKVLELTAENERLQKKVEQLSR 64 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555544443
No 75
>3cue_D Transport protein particle 22 kDa subunit; membrane traffic, GEF, tethering complex, RAB activation, GU nucleotide exchange factor; HET: PLM; 3.70A {Saccharomyces cerevisiae}
Probab=27.51 E-value=34 Score=32.06 Aligned_cols=61 Identities=20% Similarity=0.323 Sum_probs=46.7
Q ss_pred cHHH-HHHHhccCCCCCCceEEcCCCCeEEE-ecCchhhHhh-hccCc-CCCChhhHhh-----hhhhcCc
Q 011077 14 PFLS-KIYDMVEDPSTNDIVSWSSSNNSFIV-WKVAEFSRDL-LPKYF-KHSNFSSFVR-----QLNTYGF 75 (494)
Q Consensus 14 ~Fl~-KLy~mled~~~~~iIsWs~~G~sFvI-~d~~~F~~~v-LP~yF-kh~nfsSFvR-----QLN~YGF 75 (494)
.||. .+|.++=.-..+ ...|+++++.|+| .|..-+..-| ||+.. ..-+|+.|+- -|.+-||
T Consensus 88 ~fI~k~~Wk~lfgk~~d-~L~~t~~~~~y~L~~d~nPl~~fv~lP~~~~~~l~y~~f~cGIIrGaL~~~g~ 157 (193)
T 3cue_D 88 EVLSKCAFKIFLNITPN-ITNWSHNKDTFSLILDENPLADFVELPMDAMKSLWYSNILCGVLKGSLEMVQL 157 (193)
T ss_dssp HHHHHHHHHHHSSCCCC-CBCCCTTSCCCBCCBSCCGGGSSCCCCTTTTTSCCTTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCCc-cceecCCCCEEEEEECCchhhhheeCcHhHHhCcchhhhHHHHHHHHHHhCCC
Confidence 5774 488888776544 5789999999999 7777666554 78777 6778999984 3888999
No 76
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=26.35 E-value=1.8e+02 Score=29.95 Aligned_cols=35 Identities=17% Similarity=0.218 Sum_probs=17.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHT 167 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~ 167 (494)
++.+++.|+++.+.|..++..++.+.+.+..++..
T Consensus 8 ~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 42 (403)
T 4etp_A 8 LKEKIAALKEKIAALKEKIKDTELGMKELNEILIK 42 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555555555444444443
No 77
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=26.27 E-value=48 Score=24.85 Aligned_cols=24 Identities=33% Similarity=0.619 Sum_probs=15.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQ 156 (494)
|+.++..|..++..|..|+..|++
T Consensus 27 LE~~v~~L~~eN~~L~~~~~~L~~ 50 (55)
T 1dh3_A 27 LENRVAVLENQNKTLIEELKALKD 50 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566677777777766666666654
No 78
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=25.07 E-value=1.5e+02 Score=19.79 Aligned_cols=18 Identities=11% Similarity=0.322 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 011077 161 TDRQLHTVGQRVQVMEQR 178 (494)
Q Consensus 161 ~e~ql~~l~~Rl~~mE~r 178 (494)
+..-+|.|.+|+.++|..
T Consensus 11 l~~ivq~lq~r~drle~t 28 (32)
T 2akf_A 11 LNAIVQKLQERLDRLEET 28 (32)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334455666677776653
No 79
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=24.96 E-value=1.9e+02 Score=31.25 Aligned_cols=38 Identities=16% Similarity=0.181 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 139 ILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (494)
Q Consensus 139 ~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE 176 (494)
.|++.++.|..+|....++.+.++..|.++...++++|
T Consensus 114 ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRLE 151 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLE 151 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555555555555556666666666666665
No 80
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=24.94 E-value=87 Score=25.10 Aligned_cols=30 Identities=20% Similarity=0.385 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 136 EVEILKRDKNVLMQELVRLRQQQQATDRQL 165 (494)
Q Consensus 136 Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql 165 (494)
-|..|+.+...|..|...|+.++..+..+|
T Consensus 48 yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L 77 (80)
T 1nlw_A 48 HIKKLEDSDRKAVHQIDQLQREQRHLKRQL 77 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356666666666666666666655544444
No 81
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=24.89 E-value=2.1e+02 Score=29.26 Aligned_cols=10 Identities=10% Similarity=0.076 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 011077 145 NVLMQELVRL 154 (494)
Q Consensus 145 ~~L~qEL~~L 154 (494)
+.+.+|+...
T Consensus 420 ~~~~~~~~~~ 429 (487)
T 3oja_A 420 EEMYVEQQSV 429 (487)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 82
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=24.68 E-value=2.8e+02 Score=22.44 Aligned_cols=41 Identities=15% Similarity=0.208 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQV 174 (494)
Q Consensus 134 e~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~ 174 (494)
+.+...|+.....|.+.|..-+.++......+..+.+.|.+
T Consensus 19 E~rN~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld~ 59 (79)
T 3cvf_A 19 ETRNAELEHQLRAMERSLEEARAERERARAEVGRAAQLLDV 59 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44444555555555555555555555555666555554433
No 83
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=24.26 E-value=2.1e+02 Score=20.90 Aligned_cols=42 Identities=33% Similarity=0.418 Sum_probs=29.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQ 177 (494)
Q Consensus 133 Le~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE~ 177 (494)
+++.+++|..-.+.|..-+++|--++...+. .|.+|+..+|.
T Consensus 3 lEekv~~Le~~ld~LqTr~ArLlae~~ssq~---KlKqRit~lE~ 44 (46)
T 3swy_A 3 LEEKVEQLGSSLDTLQTRFARLLAEYNATQM---KMKQRLSQLES 44 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHh
Confidence 5778888888778887777777666554443 45677777764
No 84
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=23.50 E-value=2.8e+02 Score=22.06 Aligned_cols=39 Identities=18% Similarity=0.134 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 135 EEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQ 173 (494)
Q Consensus 135 ~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~ 173 (494)
.+...|+.....|.+.|..-+.+|......+..+.+.|.
T Consensus 14 ~~N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~~e~Ld 52 (72)
T 3cve_A 14 IRNKDLEGQLSEMEQRLEKSQSEQDAFRSNLKTLLEILD 52 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444444444444444555555555555555444443
No 85
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=23.40 E-value=1.2e+02 Score=24.20 Aligned_cols=38 Identities=11% Similarity=0.295 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH
Q 011077 163 RQLHTVGQRVQVMEQRQQQMMSFLAKAMHSPSFLSQLV 200 (494)
Q Consensus 163 ~ql~~l~~Rl~~mE~rQqqmmsfLak~lq~p~fl~~lv 200 (494)
..+..+-.++..+....+-++.-||.+=|+-.||.+-+
T Consensus 21 sEI~EID~Ki~nL~~mR~ivldRlA~lEqdE~~LE~~l 58 (72)
T 2xu6_A 21 SEIRDIEVEVENLRQKKEKLLGKIANIEQNQLMLEDNL 58 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 33344444444444444445555555555555554443
No 86
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=23.17 E-value=4.4e+02 Score=24.19 Aligned_cols=45 Identities=11% Similarity=0.187 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 138 EILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQM 182 (494)
Q Consensus 138 e~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE~rQqqm 182 (494)
..|......|..||.+++............|.+||..+|+..-.|
T Consensus 93 ~elq~ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~~lEKe~a~~ 137 (168)
T 3o0z_A 93 GDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEKNNL 137 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344445556666666666666666666666666666666544443
No 87
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=23.00 E-value=3.2e+02 Score=25.88 Aligned_cols=36 Identities=19% Similarity=0.225 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 138 EILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQ 173 (494)
Q Consensus 138 e~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~ 173 (494)
..|..+...|...+..++.....++.++..+...+.
T Consensus 35 ~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~ 70 (256)
T 3na7_A 35 DKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQ 70 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333333333333333333
No 88
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=22.70 E-value=4.3e+02 Score=23.90 Aligned_cols=23 Identities=26% Similarity=0.433 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 011077 135 EEVEILKRDKNVLMQELVRLRQQ 157 (494)
Q Consensus 135 ~Eie~LKrDk~~L~qEL~~LRQq 157 (494)
..|..|+.+...|..++..|...
T Consensus 68 ~~I~~L~~El~~l~~ki~dLeee 90 (152)
T 3a7p_A 68 NTLAILQKELKSKEQEIRRLKEV 90 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666666666666655543
No 89
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=22.57 E-value=2.2e+02 Score=20.39 Aligned_cols=9 Identities=33% Similarity=0.408 Sum_probs=3.7
Q ss_pred HHHHHHHHH
Q 011077 140 LKRDKNVLM 148 (494)
Q Consensus 140 LKrDk~~L~ 148 (494)
||.+.+.|.
T Consensus 5 lkselqalk 13 (48)
T 1g6u_A 5 LKSELQALK 13 (48)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444443
No 90
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=22.43 E-value=2.9e+02 Score=26.22 Aligned_cols=40 Identities=15% Similarity=0.160 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 135 EEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQV 174 (494)
Q Consensus 135 ~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~ 174 (494)
++++.|+.+...|..|+..++.++..+...+.++..|..+
T Consensus 59 ~e~~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~r 98 (213)
T 4ani_A 59 EELAAAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQ 98 (213)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567787788888888888888887777888888877765
No 91
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=22.40 E-value=2.5e+02 Score=21.05 Aligned_cols=41 Identities=20% Similarity=0.261 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 137 VEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQ 177 (494)
Q Consensus 137 ie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE~ 177 (494)
.++|-++.+.|..|-..||++.+...++|..|+..--.|..
T Consensus 5 YdQL~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKe 45 (54)
T 1deb_A 5 YDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKE 45 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHH
Confidence 46788889999999999999988888888888777766654
No 92
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=22.00 E-value=3.1e+02 Score=22.00 Aligned_cols=44 Identities=23% Similarity=0.406 Sum_probs=32.2
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQR 178 (494)
Q Consensus 132 ~Le~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE~r 178 (494)
.+++.|++|..-...|..-+++|--++...+. .|.+||..+|.+
T Consensus 4 dlEEKv~~LE~sld~LQTrfARLLaEy~ssQ~---KLKqRit~LE~~ 47 (74)
T 3swf_A 4 GLEEKVTRMESSVDLLQTRFARILAEYESMQQ---KLKQRLTKVEKF 47 (74)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 47888888888888888888888766655443 456777777754
No 93
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=21.73 E-value=2.7e+02 Score=22.72 Aligned_cols=43 Identities=21% Similarity=0.280 Sum_probs=30.4
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQV 174 (494)
Q Consensus 132 ~Le~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~ 174 (494)
..++-+..|+..++.+..++.+|..+...++.++..+...|+.
T Consensus 67 ~~~ea~~~L~~~~e~ie~~i~~le~~~~~l~~~l~~lk~~l~~ 109 (117)
T 2zqm_A 67 TKDKAVAELKEKIETLEVRLNALERQEKKLNEKLKELTAQIQS 109 (117)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566677788888888777777777777776666666665554
No 94
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=21.61 E-value=3.6e+02 Score=22.96 Aligned_cols=46 Identities=11% Similarity=0.154 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 144 KNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMMSFLAKA 189 (494)
Q Consensus 144 k~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl~~mE~rQqqmmsfLak~ 189 (494)
..+|.+||...+++...+..++..|...+..+|+.=.--.+-|..+
T Consensus 6 ~~al~~eL~~~~~ei~~L~~ei~eLk~~ve~lEkERDFYF~KLRdI 51 (106)
T 4e61_A 6 LVAIQAELTKSQETIGSLNEEIEQYKGTVSTLEIEREFYFNKLRDI 51 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 95
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=21.00 E-value=4.3e+02 Score=23.90 Aligned_cols=29 Identities=14% Similarity=0.208 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 153 RLRQQQQATDRQLHTVGQRVQVMEQRQQQ 181 (494)
Q Consensus 153 ~LRQqQ~~~e~ql~~l~~Rl~~mE~rQqq 181 (494)
.++.....+.-++..+.+++..++..-+.
T Consensus 100 ~l~DEl~aLqlq~n~lE~kl~kLq~EN~~ 128 (152)
T 3a7p_A 100 RLNAALISGTIENNVLQQKLSDLKKEHSQ 128 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444455555555443333
No 96
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=20.87 E-value=1.9e+02 Score=23.73 Aligned_cols=37 Identities=14% Similarity=0.188 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 136 EVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRV 172 (494)
Q Consensus 136 Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~~l~~Rl 172 (494)
.+..++.+...+..++..|+..+..+..++..+...+
T Consensus 4 ~~~~~~~~~~~~~~~l~~L~~~~~~l~~~i~~l~~~l 40 (112)
T 1l8d_A 4 LLEELETKKTTIEEERNEITQRIGELKNKIGDLKTAI 40 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555555555555555555554444444333
No 97
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=20.39 E-value=1.7e+02 Score=24.82 Aligned_cols=33 Identities=27% Similarity=0.367 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011077 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLH 166 (494)
Q Consensus 134 e~Eie~LKrDk~~L~qEL~~LRQqQ~~~e~ql~ 166 (494)
.+++..|+++...|..|-.+||++...++-+|.
T Consensus 11 ~e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le 43 (100)
T 1go4_E 11 REEADTLRLKVEELEGERSRLEEEKRMLEAQLE 43 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457888888888888888888887776666654
Done!