Query 011078
Match_columns 494
No_of_seqs 296 out of 886
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 20:20:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011078.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011078hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 100.0 5.4E-31 1.8E-35 263.8 9.9 214 78-306 8-238 (280)
2 4hg6_A Cellulose synthase subu 78.8 20 0.00069 40.1 13.8 97 173-277 237-361 (802)
3 1qg8_A Protein (spore coat pol 74.4 6.2 0.00021 36.4 6.9 98 173-270 87-201 (255)
4 2c0n_A A197; thermophil protei 68.8 6.4 0.00022 37.3 5.4 108 173-283 52-175 (203)
5 4fix_A UDP-galactofuranosyl tr 54.1 7.2 0.00024 42.9 3.4 98 174-277 268-410 (657)
6 2ffu_A Ppgalnact-2, polypeptid 53.8 29 0.001 36.0 7.9 47 226-277 236-283 (501)
7 2d7i_A Polypeptide N-acetylgal 46.5 35 0.0012 36.3 7.3 47 226-277 284-331 (570)
8 1xhb_A Polypeptide N-acetylgal 44.5 9.4 0.00032 39.2 2.3 47 226-277 204-251 (472)
9 2z86_A Chondroitin synthase; G 43.7 21 0.00073 37.9 5.0 100 173-277 173-323 (625)
10 2gak_A Beta-1,6-N-acetylglucos 27.0 3.9E+02 0.013 27.0 11.1 108 84-199 85-199 (391)
11 2bo4_A Mannosylglycerate synth 25.0 1.2E+02 0.0041 31.1 6.8 101 173-276 91-209 (397)
12 3bcv_A Putative glycosyltransf 23.3 24 0.00081 31.9 0.9 36 174-209 84-120 (240)
13 2p6w_A VP54, putative glycosyl 20.1 1E+02 0.0036 29.0 4.6 47 160-209 61-110 (213)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=99.97 E-value=5.4e-31 Score=263.78 Aligned_cols=214 Identities=21% Similarity=0.241 Sum_probs=144.0
Q ss_pred CCCCCCeEEEEEecCCcchHhHHHHHHHhhCCCC-ceEEEEccCCCCCCCCCCCCCCcEEecCCCCCccccCCCCcchhh
Q 011078 78 NPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNS-TRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAV 156 (494)
Q Consensus 78 ~~~~~s~IvFGIaTS~~~~~~R~~~vk~Ww~~~~-~r~~vflD~~~~~~~~~~~~Lp~v~Is~d~sr~~yt~~~g~~sa~ 156 (494)
+++++++|+|||+|+.++|++|+++++.||++.. .++++|+|.++++.... .+..+ +..+.+. .|.. .++ ..
T Consensus 8 ~~~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~~~fifsd~~d~~l~~~--~~~~~-~~~~~~~-~~~~-~~l--~~ 80 (280)
T 2j0a_A 8 LELQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQQTFIFTDSPDERLQER--LGPHL-VVTQCSA-EHSH-PAL--SC 80 (280)
T ss_dssp -CCCGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGGGEEEEESSCCHHHHHH--HGGGE-EECCC---------CC--CH
T ss_pred CCCCcccEEEEEECcHHHHHHHHHHHHHHHhccCCCceEEEcCCCccccccc--ccccc-eeccccc-cccc-cch--HH
Confidence 5789999999999999999999999998888743 46778988764321100 01112 2222211 1111 011 12
Q ss_pred HHHHHHHHHHHhcCCCCCccEEEEEcCCceeehhHHHHHhccCCCCCCEEEEecCCCCCCc----------ccccccccc
Q 011078 157 RVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQN----------AKHSFGMAF 226 (494)
Q Consensus 157 Ri~riv~e~~~~~~~~p~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~~p~YIG~~se~~~q~----------~~fg~~~A~ 226 (494)
++...+... .. +++|||+++||||||+++||+++|++||+++++|||.+++..... ..+++.||+
T Consensus 81 K~~~~~~~~---l~--~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 155 (280)
T 2j0a_A 81 KMAAEFDAF---LV--SGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIHASELQSKQRTKLVRFWFAT 155 (280)
T ss_dssp HHHHHHHHH---HH--HTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-------------------CCEEC
T ss_pred HHHHHHHHH---hC--CCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccccccccCccccccccccCccc
Confidence 333333322 12 689999999999999999999999999999999999998664210 112456899
Q ss_pred cceeeEEcHHHHHHHHHhhHHhhh--hc-ccCCcchHHHHHHHH-HcCCccccCCCCCCCCCC-CCCc-CccccCCCCCc
Q 011078 227 GGGGFAISHSLARVLAGALDSCLM--RY-AHLYGSDARVFSCLV-ELGVGLTPEPGFHQLDMR-GDMF-GMLSAHPLSPL 300 (494)
Q Consensus 227 GGaG~vLSr~Ll~~L~~~~d~C~~--~~-~~~~ggD~~L~~Ci~-~lGV~Lt~~pgfhQ~d~~-gd~~-G~~~s~~~~P~ 300 (494)
|||||+||++|+++|.+..+.|.- .. .....+|..||.||+ ++||+++++++|||.... ++.. ..+.. ++.
T Consensus 156 GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~~~~~~~~~~l~~---~~~ 232 (280)
T 2j0a_A 156 GGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLETLQLLGAAQLPE---QVT 232 (280)
T ss_dssp GGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSSCGGGCCTTTGGG---CSE
T ss_pred CCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCCchhccCCHHHhcc---Ccc
Confidence 999999999999999988766621 00 012346999999999 799999999999998753 2222 22222 456
Q ss_pred cccCCC
Q 011078 301 LSLHHL 306 (494)
Q Consensus 301 lSlHH~ 306 (494)
+|+|++
T Consensus 233 ~s~~~~ 238 (280)
T 2j0a_A 233 LSYGVF 238 (280)
T ss_dssp EECEEE
T ss_pred eecccc
Confidence 899954
No 2
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=78.79 E-value=20 Score=40.07 Aligned_cols=97 Identities=16% Similarity=0.029 Sum_probs=61.5
Q ss_pred CCccEEEEEcCCceeehhHHHHHhccC--CCCCCEEEEecCCCCC-------------C--cc-----------cccccc
Q 011078 173 AGVRWFVFGDDDTVFFVDNLVKTLSKY--DDDRWFYVGSNSEGYE-------------Q--NA-----------KHSFGM 224 (494)
Q Consensus 173 p~~kWfv~~DDDTyf~~~nLv~~Ls~y--D~~~p~YIG~~se~~~-------------q--~~-----------~fg~~~ 224 (494)
.+.+|++++|+|+.+.++.|.++++.+ |++-...-|....... + .. .++. .
T Consensus 237 a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 315 (802)
T 4hg6_A 237 LKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGG-A 315 (802)
T ss_dssp CCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTC-C
T ss_pred cCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCC-c
Confidence 367999999999999988888888776 4554444443221000 0 00 0111 2
Q ss_pred cccceeeEEcHHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccccCC
Q 011078 225 AFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP 277 (494)
Q Consensus 225 A~GGaG~vLSr~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt~~p 277 (494)
.+.|++.++.+.+++++.... ...+++|..++.-+.+.|.+....|
T Consensus 316 ~~~G~~~~~Rr~al~~vGgf~-------~~~~~ED~~l~~rl~~~G~ri~~~~ 361 (802)
T 4hg6_A 316 FFCGSAAVLRRRALDEAGGFA-------GETITEDAETALEIHSRGWKSLYID 361 (802)
T ss_dssp CCCSSSEEEEHHHHHHHTTCC-------CSSSSHHHHHHHHHHTTTCCEEECC
T ss_pred eecccchhhhHHHHHHcCCcC-------CCCcchHHHHHHHHHHcCCeEEEec
Confidence 356888999999998864221 1235689899888888876654433
No 3
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=74.37 E-value=6.2 Score=36.35 Aligned_cols=98 Identities=16% Similarity=0.175 Sum_probs=54.4
Q ss_pred CCccEEEEEcCCceeehhHHHHHhccCC--CCCCEEEEecC-----CCCCC---------cccccccccccceeeEEcHH
Q 011078 173 AGVRWFVFGDDDTVFFVDNLVKTLSKYD--DDRWFYVGSNS-----EGYEQ---------NAKHSFGMAFGGGGFAISHS 236 (494)
Q Consensus 173 p~~kWfv~~DDDTyf~~~nLv~~Ls~yD--~~~p~YIG~~s-----e~~~q---------~~~fg~~~A~GGaG~vLSr~ 236 (494)
...+|++++|||+++.++.|.++++.++ ++-.+..|... +.... ...........|+++++.+.
T Consensus 87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~ 166 (255)
T 1qg8_A 87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAAQVTWNAPCAIDHCSVMHRYS 166 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECCCSCBSCCTTTSCGGGEEEETH
T ss_pred cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhccCchHHHHHhhcCCCccceEEEEHH
Confidence 3679999999999998777666665543 34344444321 11000 00001123457899999999
Q ss_pred HHHHHHHhhHHhhh-hcccCCcchHHHHHHHHHcC
Q 011078 237 LARVLAGALDSCLM-RYAHLYGSDARVFSCLVELG 270 (494)
Q Consensus 237 Ll~~L~~~~d~C~~-~~~~~~ggD~~L~~Ci~~lG 270 (494)
+++++...++...+ .....++.|..+..-+...|
T Consensus 167 ~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g 201 (255)
T 1qg8_A 167 VLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY 201 (255)
T ss_dssp HHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC
T ss_pred HHHhhcccccccccCCcccchHHHHHHHHHHHHhC
Confidence 99997633310000 00013457887776665444
No 4
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=68.78 E-value=6.4 Score=37.29 Aligned_cols=108 Identities=16% Similarity=0.107 Sum_probs=63.1
Q ss_pred CCccEEEEEcCC---ceeehhHHHHHhccCCCCCCEEEEecCCCC----------CCcccccccccccceee-EEcHHHH
Q 011078 173 AGVRWFVFGDDD---TVFFVDNLVKTLSKYDDDRWFYVGSNSEGY----------EQNAKHSFGMAFGGGGF-AISHSLA 238 (494)
Q Consensus 173 p~~kWfv~~DDD---Tyf~~~nLv~~Ls~yD~~~p~YIG~~se~~----------~q~~~fg~~~A~GGaG~-vLSr~Ll 238 (494)
.++++++++|.| --|.++.+.++|.. ..++.+|.-.-.. -.....+.....+|+|| +++|+.+
T Consensus 52 ~~~dhllfIDAD~~~I~FdPe~V~rLl~~---g~DVV~GsYp~K~~~~~s~~a~~y~~~i~~~~V~d~~tGF~lIkR~V~ 128 (203)
T 2c0n_A 52 KDYDTLAFLDEDVVPIEIDFQKVEAKFNE---GYDVVCGYYYLKTLRGYSVYRKDWEKEIFDGEVNGCGLGFTFIKREFL 128 (203)
T ss_dssp TTCCEEEEECTTEEEEECCHHHHHHHHHH---TCSEEEEECBCTTSSSBSEESSSBCSSCCCEECSEECSSEEEEEHHHH
T ss_pred CCCCEEEEEeCCCCccccCHHHHHHHHhC---CCCEEEEEeeccCCCccchHHHHHHHhccCceeeeccccEEEEhHHHH
Confidence 689999999999 88899999999943 7788888864110 01111223456788998 6999999
Q ss_pred HHHH-Hhh-HHhhhhcccCCcchHHHHHHHHHcCCccccCCCCCCCC
Q 011078 239 RVLA-GAL-DSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLD 283 (494)
Q Consensus 239 ~~L~-~~~-d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt~~pgfhQ~d 283 (494)
++|. +.+ ---.++.++.+|+|...-.-+++.|-.+.-...+|-.|
T Consensus 129 e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~~~~~~~~~~~ 175 (203)
T 2c0n_A 129 EKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYALSSLKAYHFID 175 (203)
T ss_dssp TTSCSSCCCC---------CCHHHHHHHHHCCCEEEEEEEEEEEESS
T ss_pred HHHhhhhhhcCChhhhccccCCceEEEeccccccccccccccceeec
Confidence 9984 332 00001222345666654433343444443333344444
No 5
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=54.10 E-value=7.2 Score=42.88 Aligned_cols=98 Identities=18% Similarity=0.057 Sum_probs=58.1
Q ss_pred CccEEEEEcCCceeehhHHHHHhccCCCC-CCEEEEecC---CCC----C---------------Ccc----cc------
Q 011078 174 GVRWFVFGDDDTVFFVDNLVKTLSKYDDD-RWFYVGSNS---EGY----E---------------QNA----KH------ 220 (494)
Q Consensus 174 ~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~-~p~YIG~~s---e~~----~---------------q~~----~f------ 220 (494)
+.+|++++|||+.+.++.|.++++.++.. +...+|... ... . ... .|
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~l~ 347 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLN 347 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCSCEETTTSCSS
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccccccccccccccccc
Confidence 68999999999999887777766654322 334455321 000 0 000 00
Q ss_pred ----------c--ccccccceeeEEcHHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccccCC
Q 011078 221 ----------S--FGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP 277 (494)
Q Consensus 221 ----------g--~~~A~GGaG~vLSr~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt~~p 277 (494)
. .....+|+++++.+.+++++-.. +. + ..++.|..+..=+.+.|.++...|
T Consensus 348 ~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgf-d~----~-F~~~ED~Dl~lR~~~~G~ki~~~p 410 (657)
T 4fix_A 348 DNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQP-LP----L-FIKWDDADYGLRAAEHGYPTVTLP 410 (657)
T ss_dssp CSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSC-CS----C-SSSSHHHHHHHHHHHTTCCEEEEE
T ss_pred cccccccccccceeccccchhHhHhhHHHHHHhCCC-hh----H-hccCcHHHHHHHHHHcCCeEEEEC
Confidence 0 00134788999999999886432 21 1 134578888877777887654433
No 6
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=53.80 E-value=29 Score=35.97 Aligned_cols=47 Identities=19% Similarity=0.279 Sum_probs=30.9
Q ss_pred ccceeeEEcHHHHHHHHHhhHHhhhhcccCC-cchHHHHHHHHHcCCccccCC
Q 011078 226 FGGGGFAISHSLARVLAGALDSCLMRYAHLY-GSDARVFSCLVELGVGLTPEP 277 (494)
Q Consensus 226 ~GGaG~vLSr~Ll~~L~~~~d~C~~~~~~~~-ggD~~L~~Ci~~lGV~Lt~~p 277 (494)
..|+.+++++.+++++.. +|+- + ..+ +.|..|..=+.+.|.++...|
T Consensus 236 ~~g~~~~irr~~~~~iGg-fde~---~-~~~g~ED~dl~~Rl~~~G~~i~~~p 283 (501)
T 2ffu_A 236 IAGGLFVMDKFYFEELGK-YDMM---M-DVWGGENLEISFRVWQCGGSLEIIP 283 (501)
T ss_dssp CCSSSEEEEHHHHHHTTC-CCTT---C-CSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred ccceEEEEEHHHHHHhCC-CCcc---c-cccCcchHHHHHHHHhcCCeEEEcc
Confidence 468889999999988753 2221 1 134 568888777777776655443
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=46.48 E-value=35 Score=36.32 Aligned_cols=47 Identities=21% Similarity=0.321 Sum_probs=31.6
Q ss_pred ccceeeEEcHHHHHHHHHhhHHhhhhcccCC-cchHHHHHHHHHcCCccccCC
Q 011078 226 FGGGGFAISHSLARVLAGALDSCLMRYAHLY-GSDARVFSCLVELGVGLTPEP 277 (494)
Q Consensus 226 ~GGaG~vLSr~Ll~~L~~~~d~C~~~~~~~~-ggD~~L~~Ci~~lGV~Lt~~p 277 (494)
..|+.+++++.+++++-. +|+- + ..| +.|..+..=+.+.|..+...|
T Consensus 284 ~~g~~~~irr~~~~~iGg-fDe~---~-~~~g~ED~dl~~Rl~~~G~~i~~~p 331 (570)
T 2d7i_A 284 MAGGLFAVDRKWFWELGG-YDPG---L-EIWGGEQYEISFKVWMCGGRMEDIP 331 (570)
T ss_dssp CCSSSEEEEHHHHHHTTS-SCTT---C-CSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred ccceEEEEEHHHHHhcCC-CCCc---c-cccCcchHHHHHHHHhCCCeEEEcc
Confidence 458889999999988753 3321 2 134 468888887878887664433
No 8
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=44.53 E-value=9.4 Score=39.24 Aligned_cols=47 Identities=17% Similarity=0.290 Sum_probs=30.2
Q ss_pred ccceeeEEcHHHHHHHHHhhHHhhhhcccCC-cchHHHHHHHHHcCCccccCC
Q 011078 226 FGGGGFAISHSLARVLAGALDSCLMRYAHLY-GSDARVFSCLVELGVGLTPEP 277 (494)
Q Consensus 226 ~GGaG~vLSr~Ll~~L~~~~d~C~~~~~~~~-ggD~~L~~Ci~~lGV~Lt~~p 277 (494)
..|+.+++++.+++++.. +|+- + ..| ++|..+..=+.+.|.++...|
T Consensus 204 ~~g~~~~irr~~~~~iGg-fde~---~-~~~g~ED~dl~~R~~~~G~~i~~~p 251 (472)
T 1xhb_A 204 MAGGLFSIDRDYFQEIGT-YDAG---M-DIWGGENLEISFRIWQCGGTLEIVT 251 (472)
T ss_dssp CCSSSEEEEHHHHHHTTS-CCTT---S-CTTCCCCSHHHHHHHHTTCEEEEEE
T ss_pred ccceeEEEEHHHHHHcCC-CCCc---c-cccCchhHHHHHHHHhcCCeEEEcc
Confidence 457788999999988653 2221 1 133 468877777777776654433
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=43.69 E-value=21 Score=37.94 Aligned_cols=100 Identities=14% Similarity=0.062 Sum_probs=58.5
Q ss_pred CCccEEEEEcCCceeehhHHHHHhccCCCC-CCEEEEecC---CCCC-------------C------------------c
Q 011078 173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDD-RWFYVGSNS---EGYE-------------Q------------------N 217 (494)
Q Consensus 173 p~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~-~p~YIG~~s---e~~~-------------q------------------~ 217 (494)
...+|++++|+|+.+.++-|.+++..+..+ ....+|... +... . .
T Consensus 173 a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (625)
T 2z86_A 173 AKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKS 252 (625)
T ss_dssp CCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------------C
T ss_pred CCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccCCc
Confidence 367999999999999887777776665432 233444321 0000 0 0
Q ss_pred ccc---------------cccccccceeeEEcHHHHHHHHHhhHHhhhhcccCC-cchHHHHHHHHHcCCccccCC
Q 011078 218 AKH---------------SFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLY-GSDARVFSCLVELGVGLTPEP 277 (494)
Q Consensus 218 ~~f---------------g~~~A~GGaG~vLSr~Ll~~L~~~~d~C~~~~~~~~-ggD~~L~~Ci~~lGV~Lt~~p 277 (494)
..| .......|+++++++.+++++.. ++.- + ..| +.|..+..=+.+.|..+...|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGg-fde~---~-~~~g~ED~dl~~Rl~~~G~~i~~~p 323 (625)
T 2z86_A 253 VDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGW-FDEE---F-THWGGEDNEFGYRLYREGCYFRSVE 323 (625)
T ss_dssp CCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCC-CCTT---C-SSCCCHHHHHHHHHHHTTCEEEECG
T ss_pred cccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCC-Cccc---c-ccCCcchhhhhhhHHhCCceEEEcc
Confidence 000 00012678899999999998742 2221 1 123 468887777777786654443
No 10
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=27.01 E-value=3.9e+02 Score=26.97 Aligned_cols=108 Identities=12% Similarity=0.114 Sum_probs=63.9
Q ss_pred eEEEEEecCCcchHhHHHHHHHhhCCCCceEEEEccCCCCCC-----CCCCCCCCcEEecCCCCCccccCCCCcchhhHH
Q 011078 84 HLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSS-----SAGDPSLPRIVISADTSKFPFTFPKGLRSAVRV 158 (494)
Q Consensus 84 ~IvFGIaTS~~~~~~R~~~vk~Ww~~~~~r~~vflD~~~~~~-----~~~~~~Lp~v~Is~d~sr~~yt~~~g~~sa~Ri 158 (494)
.|.|.|.+.. .++.=..+++.++.+ ....+|=+|...+.. .+.....|++.|...... - .++|....-..
T Consensus 85 kiAflil~h~-d~~~l~rll~~ly~p-~n~y~IHvD~ks~~~~~~~~~~~~~~f~NV~v~~~~~~--v-~WGg~S~v~A~ 159 (391)
T 2gak_A 85 PIAYSIVVHH-KIEMLDRLLRAIYMP-QNFYCIHVDRKAEESFLAAVQGIASCFDNVFVASQLES--V-VYASWTRVKAD 159 (391)
T ss_dssp CEEEEEEECS-CHHHHHHHHHHHCCT-TSEEEEEECTTSCHHHHHHHHHHHHTCTTEEECSSCCC--C-CTTSHHHHHHH
T ss_pred CEEEEEEecC-CHHHHHHHHHHHhCC-CCeEEEEEeCCCCHHHHHHHHHHHhcCCCEEEeccCcc--c-ccCCchHHHHH
Confidence 5888888864 443333688888776 466777788653210 011233678877532211 1 22233222222
Q ss_pred HHHHHHHHHhcCCCCCccEEEEEcCCceee--hhHHHHHhccC
Q 011078 159 ARVVKEAVDLTDEKAGVRWFVFGDDDTVFF--VDNLVKTLSKY 199 (494)
Q Consensus 159 ~riv~e~~~~~~~~p~~kWfv~~DDDTyf~--~~nLv~~Ls~y 199 (494)
.++++.+++.. ++.+||+++-+.-|-. .+.|.+.|+..
T Consensus 160 l~ll~~aL~~~---~~w~yfilLSgsD~PLkt~~~i~~~l~~~ 199 (391)
T 2gak_A 160 LNCMKDLYRMN---ANWKYLINLCGMDFPIKTNLEIVRKLKCS 199 (391)
T ss_dssp HHHHHHHHHHC---SCCCEEEEEETTCEESSCHHHHHHHHHHT
T ss_pred HHHHHHHHhcC---CCCCEEEEecCCCccccCHHHHHHHHHhc
Confidence 35666665443 5899999998888765 57888888764
No 11
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=25.04 E-value=1.2e+02 Score=31.09 Aligned_cols=101 Identities=17% Similarity=0.041 Sum_probs=59.4
Q ss_pred CCccEEEEEcCCce-eehhHHHHHhccCCCCCCEEEEecCCCC-CCc--ccc-------cccccc-------cceeeEEc
Q 011078 173 AGVRWFVFGDDDTV-FFVDNLVKTLSKYDDDRWFYVGSNSEGY-EQN--AKH-------SFGMAF-------GGGGFAIS 234 (494)
Q Consensus 173 p~~kWfv~~DDDTy-f~~~nLv~~Ls~yD~~~p~YIG~~se~~-~q~--~~f-------g~~~A~-------GGaG~vLS 234 (494)
.+.+|++++|.|.- .+++-+.+++...+..-.+.+|...... ... ..+ .|.... .+|-++++
T Consensus 91 a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~g~D~V~g~~~r~~~~~~~~~~~~~~ll~~~~~~~~~~~i~dp~sG~~a~~ 170 (397)
T 2bo4_A 91 TQWERIHFYDADITSFGPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFALLWPHTELSWIEQPLGGELLMR 170 (397)
T ss_dssp CCCSEEEECCTTCSSCCHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHHHCTTSSGGGCSCTTCCCEEEE
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHHHHcCCCEEEEEeccccCCcHHHHHHHHHHHHHHHHHhhccccccCCcccEEEe
Confidence 36799999999995 6777666666655445567888632111 000 000 111111 14556899
Q ss_pred HHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccccC
Q 011078 235 HSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPE 276 (494)
Q Consensus 235 r~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt~~ 276 (494)
+.+++.+... +.-.....|+-|..+-..+...|.++...
T Consensus 171 R~vl~~l~~~---~~~~~~~~fg~eiel~~~a~~~G~rI~EV 209 (397)
T 2bo4_A 171 REVAAMLYED---ERVRRRSDWGIDTLYTFVTVQQGVSIYEC 209 (397)
T ss_dssp HHHHHHHHHC---HHHHTCCSTTHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhhh---cccCcCCCcchHHHHHHHHHHcCCEEEEE
Confidence 9999987531 11012235777888777666677766543
No 12
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=23.27 E-value=24 Score=31.87 Aligned_cols=36 Identities=11% Similarity=-0.004 Sum_probs=24.1
Q ss_pred CccEEEEEcCCceeehhHHHHHhccCCC-CCCEEEEe
Q 011078 174 GVRWFVFGDDDTVFFVDNLVKTLSKYDD-DRWFYVGS 209 (494)
Q Consensus 174 ~~kWfv~~DDDTyf~~~nLv~~Ls~yD~-~~p~YIG~ 209 (494)
..+|++|+|+|.++.++.|.++++.+.. +..+.+|.
T Consensus 84 ~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~ 120 (240)
T 3bcv_A 84 TGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTG 120 (240)
T ss_dssp CSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC-
T ss_pred CCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEe
Confidence 5699999999999987666666555432 33444443
No 13
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=20.13 E-value=1e+02 Score=29.02 Aligned_cols=47 Identities=19% Similarity=0.396 Sum_probs=32.8
Q ss_pred HHHHHHHHhcCCCCCccEEEEEcCCceeehhHHHHHhccC---CCCCCEEEEe
Q 011078 160 RVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKY---DDDRWFYVGS 209 (494)
Q Consensus 160 riv~e~~~~~~~~p~~kWfv~~DDDTyf~~~nLv~~Ls~y---D~~~p~YIG~ 209 (494)
.+++.+...+ |++.||..+|-|++|--.|...-|.+| +-...++-|-
T Consensus 61 W~IR~AM~kh---PeAEWfWWLDsDAlIMDmnf~lPLe~yldl~~~NlvvHGw 110 (213)
T 2p6w_A 61 WIIQQAAEKF---PSTEWFLWLDSDVYVNPKNKNKPITSFIDLSDPNILYHTF 110 (213)
T ss_dssp HHHHHHHHHC---TTCSEEEEECTTEEECGGGTTSCGGGTCCCCCTTCCEEEE
T ss_pred HHHHHHHHHC---CCceEEEEecCCceeecCCCCCcHHHccccccCceeeccc
Confidence 3566665444 899999999999998866666667777 3222356555
Done!