BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011080
(494 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 292/475 (61%), Gaps = 7/475 (1%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
YK + +G W+ S + + I P + V A + EEV+ V +AK AQ +W
Sbjct: 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYI 62
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+RA LHK A IL K I L KE+AK K AV+EVVR+ ++++Y AEEG+R+ EG
Sbjct: 63 ERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRM--EG 120
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
++L SF + K + + P+G+VLAI PFNYPVNLA SKIAPALIAGN I KPPT
Sbjct: 121 EVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPT 180
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGIS--IS 251
QG+++ L + F AG P G+ + +TG+GSEIGD++ H ++N I+FTG TGI I
Sbjct: 181 QGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTG-STGIGERIG 239
Query: 252 KKAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADX 311
K AGM P+ +ELGGK + G F YSGQRCTAVK LVMESVAD
Sbjct: 240 KMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE 299
Query: 312 XXXXXXXXXXXXXXGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLI 371
G PEDD DITP++ SA+++EGL+ DA K AT E KREGNLI
Sbjct: 300 LVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLI 359
Query: 372 WPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAIL 431
P+L D V DMR+AWEEPFGPVLP+IR+ SVEE I N S +GLQ +FT D +A
Sbjct: 360 CPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 419
Query: 432 ISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
I++ +E GTV IN+ RG D+FPF G K SG G QG+ SI MT +KS V ++
Sbjct: 420 IAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 474
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 292/475 (61%), Gaps = 7/475 (1%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
YK + +G W+ S + + I P + V A + EEV+ V +AK AQ +W
Sbjct: 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYI 62
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+RA LHK A IL K I L KE+AK K AV+EVVR+ ++++Y AEEG+R+ EG
Sbjct: 63 ERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRM--EG 120
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
++L SF + K + + P+G+VLAI PFNYPVNLA SKIAPALIAGN I KPPT
Sbjct: 121 EVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPT 180
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGIS--IS 251
QG+++ L + F AG P G+ + +TG+GSEIGD++ H ++N I+F+G TGI I
Sbjct: 181 QGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSG-STGIGERIG 239
Query: 252 KKAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADX 311
K AGM P+ +ELGGK + G F YSGQRCTAVK LVMESVAD
Sbjct: 240 KMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE 299
Query: 312 XXXXXXXXXXXXXXGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLI 371
G PEDD DITP++ SA+++EGL+ DA K AT E KREGNLI
Sbjct: 300 LVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLI 359
Query: 372 WPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAIL 431
P+L D V DMR+AWEEPFGPVLP+IR+ SVEE I N S +GLQ +FT D +A
Sbjct: 360 CPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 419
Query: 432 ISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
I++ +E GTV IN+ RG D+FPF G K SG G QG+ SI MT +KS V ++
Sbjct: 420 IAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 474
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 434 bits (1115), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 291/475 (61%), Gaps = 7/475 (1%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
YK + +G W+ S + + I P + V A + EEV+ V +AK AQ +W
Sbjct: 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYI 62
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+RA LHK A IL K I L KE+AK K AV+EVVR+ ++++Y AEEG+R+ EG
Sbjct: 63 ERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRM--EG 120
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
++L SF + K + + P+G+VLAI PFNYPVNLA SKIAPALIAGN I KPPT
Sbjct: 121 EVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPT 180
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGIS--IS 251
QG+++ L + F AG P G+ + +TG+GSEIGD++ H ++N I+FTG TGI I
Sbjct: 181 QGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTG-STGIGERIG 239
Query: 252 KKAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADX 311
K AGM P+ + LGGK + G F YSGQRCTAVK LVMESVAD
Sbjct: 240 KMAGMRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE 299
Query: 312 XXXXXXXXXXXXXXGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLI 371
G PEDD DITP++ SA+++EGL+ DA K AT E KREGNLI
Sbjct: 300 LVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLI 359
Query: 372 WPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAIL 431
P+L D V DMR+AWEEPFGPVLP+IR+ SVEE I N S +GLQ +FT D +A
Sbjct: 360 CPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 419
Query: 432 ISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
I++ +E GTV IN+ RG D+FPF G K SG G QG+ SI MT +KS V ++
Sbjct: 420 IAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 474
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 291/475 (61%), Gaps = 7/475 (1%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
YK + +G W+ S + + I P + V A + EEV+ V +AK AQ +W
Sbjct: 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYI 62
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+RA LHK A IL K I L KE+AK K AV+EVVR+ ++++Y AEEG+R+ EG
Sbjct: 63 ERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRM--EG 120
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
++L SF + K + + P+G+VLAI PFNYPVNLA SKIAPALIAGN I KPPT
Sbjct: 121 EVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPT 180
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGIS--IS 251
QG+++ L + F AG P G+ + +TG+GSEIGD++ H ++N I+FTG TGI I
Sbjct: 181 QGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTG-STGIGERIG 239
Query: 252 KKAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADX 311
K AGM P+ +ELGGK + G F YSGQR TAVK LVMESVAD
Sbjct: 240 KMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVADE 299
Query: 312 XXXXXXXXXXXXXXGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLI 371
G PEDD DITP++ SA+++EGL+ DA K AT E KREGNLI
Sbjct: 300 LVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLI 359
Query: 372 WPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAIL 431
P+L D V DMR+AWEEPFGPVLP+IR+ SVEE I N S +GLQ +FT D +A
Sbjct: 360 CPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 419
Query: 432 ISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
I++ +E GTV IN+ RG D+FPF G K SG G QG+ SI MT +KS V ++
Sbjct: 420 IAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 474
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 431 bits (1107), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/477 (47%), Positives = 298/477 (62%), Gaps = 3/477 (0%)
Query: 16 FFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKR 75
+G W +S +G+ ++I P + + A +QEEVN ++ AK AQK W P+ +R
Sbjct: 14 ILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHER 73
Query: 76 AELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKL 135
+LL+ A +L+E+K I E ++ E+AKP K A+ EV R+ D++ + A+E +R+ GE
Sbjct: 74 VDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGE--T 131
Query: 136 LVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQG 195
L D F G K L + PLGVVLAI PFNYPVNLA +KIAPAL+ GN++V KP TQG
Sbjct: 132 LKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQG 191
Query: 196 AVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGIS-ISKKA 254
+++ + MV AG P+G+I VTG+GS IGD L HP I+ I+FTGG T IS+KA
Sbjct: 192 SLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKA 251
Query: 255 GMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXXX 314
MIP+ +ELGGK V G FSYSGQRCTA+K V +SVAD
Sbjct: 252 KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVA 311
Query: 315 XXXXXXXXXXXGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPL 374
G+PEDD DITPV+ E SA FI+GL+ DA + AT KR+GNL+ P
Sbjct: 312 NIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNLLSPT 371
Query: 375 LLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISD 434
LLD+V P MR+AWEEPFGPVLP+IR+ E I N S++GLQ +FT+D ++AI I
Sbjct: 372 LLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGK 431
Query: 435 AMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINLPTPSY 491
+E GTV IN+ RGPDHFPF G+K SG+G QGI S+ MT+ + TV+NL Y
Sbjct: 432 HLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNLAENLY 488
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 148/479 (30%), Positives = 242/479 (50%), Gaps = 26/479 (5%)
Query: 16 FFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKR 75
F DG W + + + +INP + + ++ A ++EE + ++TA+ ++ P+ KR
Sbjct: 2 MFIDGKW---INREDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKR 58
Query: 76 AELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRS---GDLVSYCAEEGVRILGE 132
+L A +KE+K +A+ L + KP K A EV RS L ++ +E
Sbjct: 59 YNILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHR----- 113
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
+ P ++R T + P+G+V AI PFN+P+NL+ KIAPA+ GN IV P
Sbjct: 114 -----DEVIPSDDR--LIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPS 166
Query: 193 TQGAVAALHMVHCFHLA----GFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TG 247
++ + + + A P G+ + +TG G +GD + ++ +N ISFTG G
Sbjct: 167 SKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVG 226
Query: 248 ISISKKAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMES 307
I+KKAG + +ELGG +KG F Y+GQ C +V + LV ES
Sbjct: 227 ELITKKAGFKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDES 286
Query: 308 VADXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR 366
+AD G P D+ D+ P+++ A ++E +V A + KR
Sbjct: 287 IADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR 346
Query: 367 EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDI 426
+ L +P +L+ V D + E F PV+P+IR N EE I N++ +GL +FT DI
Sbjct: 347 DKALFYPTILE-VDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDI 404
Query: 427 NKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485
NK++ ++ +E G V IN + D+ PF G+K SG+G +G+ ++ M+ IK+ +I+
Sbjct: 405 NKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIIS 463
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/499 (30%), Positives = 228/499 (45%), Gaps = 29/499 (5%)
Query: 1 MAVFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETA 60
MA FEE K + G + ++SSG + INP + +VQ ++E+V + V++A
Sbjct: 1 MARFEE-------QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSA 53
Query: 61 KLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKP-AKDAVTEVVRSGDLV 119
QK WA +R+ +L +A IL+E+ +A + KP A+ ++V D++
Sbjct: 54 VEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVL 113
Query: 120 SYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAP 179
Y A I GE P E T + T + PLGVV I +NYPV +A+ K AP
Sbjct: 114 EYYAGLVPAIEGE-------QIPLRE-TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAP 165
Query: 180 ALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCI 239
AL AGN+++ KP + AL + + AG P G+ + +TG G E+G +LT HP I I
Sbjct: 166 ALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKI 225
Query: 240 SFTGG-DTGISISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQR 295
SFTGG TG + A L+ MELGGK V F SGQ
Sbjct: 226 SFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQV 285
Query: 296 CTAVKVALVMESVADXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAK 354
CT + S G P+D+ + P+V+ + G + K
Sbjct: 286 CTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGK 345
Query: 355 -QKAATFCQEYK------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGI 407
QKA C + +G + P + + R DM I EE FGPV+ ++ + +E I
Sbjct: 346 AQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAI 405
Query: 408 HHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQ 467
N + +GL V T+D+ +A +E G IN+ P P G K SG+G +
Sbjct: 406 RRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTW-GESPAEMPVGGYKQSGVGRE 464
Query: 468 GITNSINMMTKIKSTVINL 486
++ T+IKS + L
Sbjct: 465 NGLTTLAHYTRIKSVQVEL 483
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 148/485 (30%), Positives = 223/485 (45%), Gaps = 22/485 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWK 74
K + G + ++SSG + INP + +VQ ++E+V + V++A QK WA +
Sbjct: 7 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQ 66
Query: 75 RAELLHKAAAILKEQKAPIAECLVKEIAKP-AKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
R+ +L +A IL+E+ +A + KP A+ ++V D++ Y A I GE
Sbjct: 67 RSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGE- 125
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
P E T + T + PLGVV I +NYPV +A+ K APAL AGN+++ KP
Sbjct: 126 ------QIPLRE-TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 178
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISK 252
+ AL + + AG P G+ + +TG G E+G +LT HP I ISFTGG TG +
Sbjct: 179 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 238
Query: 253 KAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVA 309
A L+ MELGGK V F SGQ CT + S
Sbjct: 239 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 298
Query: 310 DXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAK-QKAATFCQEYK-- 365
G P+D+ + P+V+ + G + K QKA C +
Sbjct: 299 ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVT 358
Query: 366 ----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
+G + P + + R DM I EE FGPV+ ++ + +E I N + +GL V
Sbjct: 359 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGV 418
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
T+D+ +A +E G IN+ P P G K SG+G + ++ T+IKS
Sbjct: 419 VTQDLARAHRAIHRLEAGICWINTW-GESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKS 477
Query: 482 TVINL 486
+ L
Sbjct: 478 VQVEL 482
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 152/499 (30%), Positives = 227/499 (45%), Gaps = 29/499 (5%)
Query: 1 MAVFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETA 60
MA FEE K + G + ++SSG + INP + +VQ ++E+V + V++A
Sbjct: 1 MARFEE-------QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSA 53
Query: 61 KLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKP-AKDAVTEVVRSGDLV 119
QK WA +R+ +L +A IL+E+ +A + KP A+ ++V D++
Sbjct: 54 VEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVL 113
Query: 120 SYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAP 179
Y A I GE P E T + T + PLGVV I +NYPV +A+ K AP
Sbjct: 114 EYYAGLVPAIEGE-------QIPLRE-TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAP 165
Query: 180 ALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCI 239
AL AGN+++ KP + AL + + AG P G+ + +TG G E+G +LT HP I I
Sbjct: 166 ALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKI 225
Query: 240 SFTGG-DTGISISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQR 295
SFTGG TG + A L+ MELGGK V F SGQ
Sbjct: 226 SFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQV 285
Query: 296 CTAVKVALVMESVADXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAK 354
T + S G P+D+ + P+V+ + G + K
Sbjct: 286 ATNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGK 345
Query: 355 -QKAATFCQEYK------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGI 407
QKA C + +G + P + + R DM I EE FGPV+ ++ + +E I
Sbjct: 346 AQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAI 405
Query: 408 HHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQ 467
N + +GL V T+D+ +A +E G IN+ P P G K SG+G +
Sbjct: 406 RRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTW-GESPAEMPVGGYKQSGVGRE 464
Query: 468 GITNSINMMTKIKSTVINL 486
++ T+IKS + L
Sbjct: 465 NGLTTLAHYTRIKSVQVEL 483
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 152/499 (30%), Positives = 227/499 (45%), Gaps = 29/499 (5%)
Query: 1 MAVFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETA 60
MA FEE K + G + ++SSG + INP + +VQ ++E+V + V++A
Sbjct: 1 MARFEE-------QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSA 53
Query: 61 KLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKP-AKDAVTEVVRSGDLV 119
QK WA +R+ +L +A IL+E+ +A + KP A+ ++V D++
Sbjct: 54 VEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVL 113
Query: 120 SYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAP 179
Y A I GE P E T + T + PLGVV I +NYPV +A+ K AP
Sbjct: 114 EYYAGLVPAIEGE-------QIPLRE-TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAP 165
Query: 180 ALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCI 239
AL AGN+++ KP + AL + + AG P G+ + +TG G E+G +LT HP I I
Sbjct: 166 ALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKI 225
Query: 240 SFTGG-DTGISISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQR 295
SFTGG TG + A L+ MELGGK V F SGQ
Sbjct: 226 SFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQV 285
Query: 296 CTAVKVALVMESVADXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAK 354
T + S G P+D+ + P+V+ + G + K
Sbjct: 286 XTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGK 345
Query: 355 -QKAATFCQEYK------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGI 407
QKA C + +G + P + + R DM I EE FGPV+ ++ + +E I
Sbjct: 346 AQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAI 405
Query: 408 HHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQ 467
N + +GL V T+D+ +A +E G IN+ P P G K SG+G +
Sbjct: 406 RRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTW-GESPAEMPVGGYKQSGVGRE 464
Query: 468 GITNSINMMTKIKSTVINL 486
++ T+IKS + L
Sbjct: 465 NGLTTLAHYTRIKSVQVEL 483
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 204 bits (520), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 222/485 (45%), Gaps = 22/485 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWK 74
K + G + ++SSG + INP + +VQ ++E+V + V++A QK WA +
Sbjct: 7 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQ 66
Query: 75 RAELLHKAAAILKEQKAPIAECLVKEIAKP-AKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
R+ +L +A IL+E+ +A + KP A+ ++V D++ Y A I GE
Sbjct: 67 RSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGE- 125
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
P E T + T + PLGVV I +NYPV +A+ K APAL AGN+++ KP
Sbjct: 126 ------QIPLRE-TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 178
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISK 252
+ AL + + AG P G+ + +TG G E+G +LT HP I ISFTGG TG +
Sbjct: 179 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 238
Query: 253 KAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVA 309
A L+ M LGGK V F SGQ CT + S
Sbjct: 239 SASSSSLKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 298
Query: 310 DXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAK-QKAATFCQEYK-- 365
G P+D+ + P+V+ + G + K QKA C +
Sbjct: 299 ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVT 358
Query: 366 ----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
+G + P + + R DM I EE FGPV+ ++ + +E I N + +GL V
Sbjct: 359 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGV 418
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
T+D+ +A +E G IN+ P P G K SG+G + ++ T+IKS
Sbjct: 419 VTQDLARAHRAIHRLEAGICWINTW-GESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKS 477
Query: 482 TVINL 486
+ L
Sbjct: 478 VQVEL 482
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/464 (30%), Positives = 220/464 (47%), Gaps = 26/464 (5%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWK 74
K G W + +S + T INP + + +V+ E AK AQ WA TP +
Sbjct: 14 KHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAE 73
Query: 75 RAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGK 134
R+ ++++AA +L+E + I E L+KE A E+ +G++ A R+ G+
Sbjct: 74 RSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRV--HGR 131
Query: 135 LLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP--- 191
+ S++ PG E Y ++ GVV I P+N+P+NL++ +APAL GN++V+KP
Sbjct: 132 ISPSNT-PGKENRVY----RVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASD 186
Query: 192 -PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISI 250
P G V + F AG P G+IS V G GSEIGD H ISFTG +
Sbjct: 187 TPVTGGVIPARI---FEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGS---TPV 240
Query: 251 SKKAG--------MIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVA 302
++ G M + +ELGG G F + GQ C ++
Sbjct: 241 GRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRV 300
Query: 303 LVMESVADXXXXXXXXXXXXXXXGAPEDDCDIT-PVVTESSANFIEGLVMDAKQKAATFC 361
+V +V D G P + + PV+ +S + ++ + AK++ AT
Sbjct: 301 IVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQ 360
Query: 362 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
E EG L+ P + +V DM IA EE FGP++ V++ + NAS+FGL V
Sbjct: 361 VEGPIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAV 420
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG 465
+++DI++A + +++G V IN H F G K+SG+G
Sbjct: 421 WSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLG 464
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 150/488 (30%), Positives = 228/488 (46%), Gaps = 27/488 (5%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA---QKSWAKTP 71
K F + W+ S SG+ + NP T + VQ + +++K V+ A+LA W +
Sbjct: 20 KIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRMD 79
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA----VTEVVRSGDLVSYCAEEGV 127
+R LL K A +++ +A +A KP A + V+++ + Y A
Sbjct: 80 ASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKT---LRYYAGWAD 136
Query: 128 RILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSI 187
+I G + D F T P+GV I P+N+P+ + KIAPAL GN++
Sbjct: 137 KIHGMTIPVDGDYF--------TFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTV 188
Query: 188 VLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DT 246
V+KP Q ++AL+M AGFP G+++ + G G G + H I+ I+FTG +
Sbjct: 189 VIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEV 248
Query: 247 GISISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVAL 303
G I + AG L+ +ELGGK +G F GQ CTA
Sbjct: 249 GKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIF 308
Query: 304 VMESVADXXXXXXXXXXXXXXXGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATF-C 361
V ES+ + G+P D + P + + N I L+ + A C
Sbjct: 309 VEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLEC 368
Query: 362 --QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQG 419
+ R+G I P + NV DMRIA EE FGPV ++R +++E I N S+FGL
Sbjct: 369 GGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVA 428
Query: 420 CVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKI 479
VFT DINKA+++S AM+ GTV IN + PF G K SG G + + +++
Sbjct: 429 AVFTNDINKALMVSSAMQAGTVWINCYNALNAQS-PFGGFKMSGNGREMGEFGLREYSEV 487
Query: 480 KSTVINLP 487
K+ + +P
Sbjct: 488 KTVTVKIP 495
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 216/475 (45%), Gaps = 15/475 (3%)
Query: 19 DGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAEL 78
+G W +++G+++ + NP V +E ++ A A +W +RA +
Sbjct: 15 NGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATI 74
Query: 79 LHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVS 138
L ++ E + +A + E KP +A E+ + + + AEEG RI G
Sbjct: 75 LRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYG------- 127
Query: 139 DSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVA 198
D+ PG++ K + K P+GV AI P+N+P + K PAL AG ++VLKP +Q +
Sbjct: 128 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 187
Query: 199 ALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG-- 255
AL + AG P G+ + VTG +G+ LT +P + +SFTG + G + ++
Sbjct: 188 ALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKD 247
Query: 256 MIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXX 315
+ + +ELGG + F +GQ C V + V D
Sbjct: 248 IKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEK 307
Query: 316 XXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATFC---QEYKREGNLI 371
G D+ I P++ E + +E + DA +K A + ++R GN
Sbjct: 308 LQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFF 367
Query: 372 WPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAIL 431
P +L +V + +++ EE FGP+ P+ R + I N + FGL + RD+++
Sbjct: 368 QPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFR 427
Query: 432 ISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
+ +A+E G V IN+ + PF G+K SG+G +G I +IK I L
Sbjct: 428 VGEALEYGIVGINTGIISN-EVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL 481
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 216/475 (45%), Gaps = 15/475 (3%)
Query: 19 DGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAEL 78
+G W +++G+++ + NP V +E ++ A A +W +RA +
Sbjct: 15 NGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATI 74
Query: 79 LHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVS 138
L ++ E + +A + E KP +A E+ + + + AEEG RI G
Sbjct: 75 LRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYG------- 127
Query: 139 DSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVA 198
D+ PG++ K + K P+GV AI P+N+P + K PAL AG ++VLKP +Q +
Sbjct: 128 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 187
Query: 199 ALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG-- 255
AL + AG P G+ + VTG +G+ LT +P + +SFTG + G + ++
Sbjct: 188 ALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKD 247
Query: 256 MIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXX 315
+ + +ELGG + F +GQ C V + V D
Sbjct: 248 IKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEK 307
Query: 316 XXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATFC---QEYKREGNLI 371
G D+ I P++ E + +E + DA +K A + ++R GN
Sbjct: 308 LQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFF 367
Query: 372 WPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAIL 431
P +L +V + +++ EE FGP+ P+ R + I N + FGL + RD+++
Sbjct: 368 QPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFR 427
Query: 432 ISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
+ +A+E G V IN+ + PF G+K SG+G +G I +IK I L
Sbjct: 428 VGEALEYGIVGINTGIISN-EVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL 481
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 140/464 (30%), Positives = 219/464 (47%), Gaps = 21/464 (4%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS--WAKTPLWK 74
+ DG W +S++ + IINP ++ F V T+E+ + + A+ A +S W++
Sbjct: 36 YIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAET 95
Query: 75 RAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGK 134
R + + A +KE + +A + K +++ ++ ++ Y A + GE
Sbjct: 96 RGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGE-- 153
Query: 135 LLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQ 194
++ P E K P+GVV I P+NYP+ A KIAPAL G S+V+KP
Sbjct: 154 -MIDSPIPDTESK----IVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEI 208
Query: 195 GAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKK 253
+ + + GFPKG I+ + G GSE+GD ++ H ++ +SFTGG +TG I K
Sbjct: 209 TPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKN 268
Query: 254 AG--MIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADX 311
A + + +ELGGK + GG+ ++GQ C+A LV S+ D
Sbjct: 269 AANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDK 328
Query: 312 XXXXXXXXXXXXXXGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR---- 366
G D D ++ PV++ N IE + AK + AT KR
Sbjct: 329 FEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRD 388
Query: 367 ---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 423
+G P ++ N MRI EE FGPV+ V + +E I N S +GL G VF+
Sbjct: 389 DLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFS 448
Query: 424 RDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQ 467
+DI KA +++ ++ GTV IN P+ G K SGIG +
Sbjct: 449 KDIGKAQRVANKLKLGTVWINDFHPYFA-QAPWGGYKQSGIGRE 491
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 146/477 (30%), Positives = 224/477 (46%), Gaps = 22/477 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA--QKSWAKTPL 72
+ F DG WR+ + +INP+T + + A T E+V V A+ A + +W+ T
Sbjct: 9 QLFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSG 68
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGE 132
RA L AA + E+K + + KP +AV ++ Y A + + G+
Sbjct: 69 AHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALDGK 128
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
K V+ P + L + PLGVV I P+NYP+ +A KIAPAL AG + VLKP
Sbjct: 129 QKAPVT--LPMERFKSHVL--RQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPS 184
Query: 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISIS 251
+V L + G P G+++ +TG G + G L HP ++ I+FTG TG +
Sbjct: 185 ELASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVM 244
Query: 252 KKAGMI--PLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVA 309
A + P+ +ELGGK + G F +GQ C+A LV ES+A
Sbjct: 245 ASAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIA 304
Query: 310 DXXXXXXXXXXXXXXXGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ-----E 363
P E+ C + PV+++ + I + AK + AT E
Sbjct: 305 AEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPE 364
Query: 364 YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 423
+ ++G I P ++ ++ M+I EE FGPVL V +S +E I N + +GL VF+
Sbjct: 365 HLKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFS 424
Query: 424 RDINKAILISDAMETGTVQIN-SAPSRGPDHFPFQGLKDSGIGSQ----GITNSINM 475
D+ + I+ A+E G V +N S P P+ G+K SG G + GI N +N+
Sbjct: 425 NDLERCERITKALEVGAVWVNCSQPCFV--QAPWGGIKRSGFGRELGEWGIQNYLNI 479
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 209/475 (44%), Gaps = 17/475 (3%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
++ + G W+ + S + + +P T + V E + +E A+ A W
Sbjct: 13 HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAK 72
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+RA +L + ++ +A L E KP +A E+ + + + AEEG R+ G
Sbjct: 73 ERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAG-- 130
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
D+ P + K + K P+GV AI P+N+P + K+ PAL AG IV+KP
Sbjct: 131 -----DTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAE 185
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISISKK 253
+AL M AG PKG++S V G IG +T +P + +SFT G T +
Sbjct: 186 STPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFT-GSTAVGRLLM 244
Query: 254 AGMIP----LQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVA 309
A P L +ELGG + + +GQ C V E V
Sbjct: 245 AQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVY 304
Query: 310 DXXXXXXXXXXXXXXXG-APEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREG 368
D G E + P++ E++ +E + DA K A+ KR
Sbjct: 305 DAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHA 364
Query: 369 ---NLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 425
P +L V+PDM +A EE FGP+ P+ R S EE + N + FGL +++RD
Sbjct: 365 LGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRD 424
Query: 426 INKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480
I + +++A+E G V IN+ + PF G+K SG+G +G I+ IK
Sbjct: 425 IGRVWRVAEALEYGMVGINTGLISN-EVAPFGGVKQSGLGREGSHYGIDDYVVIK 478
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 143/498 (28%), Positives = 222/498 (44%), Gaps = 26/498 (5%)
Query: 3 VFEEIVDENG---VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVET 59
+ E ++ E G VY + G W SG+ + + +P +V + ++EEV + ++
Sbjct: 5 LLEGVIKEKGGVPVYPSYLAGEW--GGSGQEIEVKSPIDLATIAKVISPSREEVERTLDV 62
Query: 60 A-KLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDL 118
K + S P +R +L KAA I++ AE LV KP AV EV + D
Sbjct: 63 LFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDR 122
Query: 119 VSYCAEEGVRILGEGKLLVSDSFPGNERTKYC----LTSKIPLGVVLAIPPFNYPVNLAV 174
+ AE ++ +G D PG+ L + PLGVV AI PFNYP+ AV
Sbjct: 123 LR-LAELDLKKIG------GDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAV 175
Query: 175 SKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHP 234
+KI + I GN++V+KP + A V AGFP I+ + G E + +
Sbjct: 176 NKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE-AEKIVADD 234
Query: 235 SINCISFTGG-DTGISISKKAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSG 293
+ +SFTG + G + K G+ MELGG +G +SY+G
Sbjct: 235 RVAAVSFTGSTEVGERVVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAG 294
Query: 294 QRCTAVKVALVMESVADXXXXXXXXXXXXXXXGAPED-DCDITPVVTESSANFIEGLVMD 352
QRC A+K+ L V G P D D+ P+++ S+ + + + D
Sbjct: 295 QRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIED 354
Query: 353 AKQKAATFCQEYKREG-NLIWPLLL----DNVRPDMRIAWEEPFGPVLPVIRINSVEEGI 407
A +K +R G + P L+ D V+ DM + E F PV + + +++ I
Sbjct: 355 AVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVK-DMVLYKREVFAPVASAVEVKDLDQAI 413
Query: 408 HHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQ 467
N +GL VF RD+ K +E G + IN P G ++PF G K SG+ +
Sbjct: 414 ELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFRE 473
Query: 468 GITNSINMMTKIKSTVIN 485
GI ++ +T K+ V N
Sbjct: 474 GIGYAVEAVTAYKTIVFN 491
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 181 bits (459), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 143/498 (28%), Positives = 222/498 (44%), Gaps = 26/498 (5%)
Query: 3 VFEEIVDENG---VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVET 59
+ E ++ E G VY + G W SG+ + + +P +V + ++EEV + ++
Sbjct: 5 LLEGVIKEKGGVPVYPSYLAGEW--GGSGQEIEVKSPIDLATIAKVISPSREEVERTLDV 62
Query: 60 A-KLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDL 118
K + S P +R +L KAA I++ AE LV KP AV EV + D
Sbjct: 63 LFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDR 122
Query: 119 VSYCAEEGVRILGEGKLLVSDSFPGNERTKYC----LTSKIPLGVVLAIPPFNYPVNLAV 174
+ AE ++ +G D PG+ L + PLGVV AI PFNYP+ AV
Sbjct: 123 LR-LAELDLKKIG------GDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAV 175
Query: 175 SKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHP 234
+KI + I GN++V+KP + A V AGFP I+ + G E + +
Sbjct: 176 NKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE-AEKIVADD 234
Query: 235 SINCISFTGG-DTGISISKKAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSG 293
+ +SFTG + G + K G+ MELGG +G +SY+G
Sbjct: 235 RVAAVSFTGSTEVGERVVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAG 294
Query: 294 QRCTAVKVALVMESVADXXXXXXXXXXXXXXXGAPED-DCDITPVVTESSANFIEGLVMD 352
QRC A+K+ L V G P D D+ P+++ S+ + + + D
Sbjct: 295 QRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIED 354
Query: 353 AKQKAATFCQEYKREG-NLIWPLLL----DNVRPDMRIAWEEPFGPVLPVIRINSVEEGI 407
A +K +R G + P L+ D V+ DM + E F PV + + +++ I
Sbjct: 355 AVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVK-DMVLYKREVFAPVALAVEVKDLDQAI 413
Query: 408 HHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQ 467
N +GL VF RD+ K +E G + IN P G ++PF G K SG+ +
Sbjct: 414 ELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFRE 473
Query: 468 GITNSINMMTKIKSTVIN 485
GI ++ +T K+ V N
Sbjct: 474 GIGYAVEAVTAYKTIVFN 491
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 225/484 (46%), Gaps = 21/484 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTP 71
K F + W S SGK + NP T + V+ +E+V+K V+ A+ A + W
Sbjct: 22 KIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMD 81
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA-VTEVVRSGDLVSYCAEEGVRIL 130
+R LL+K A +++ + +A K +A + ++ + YCA +I
Sbjct: 82 ASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI- 140
Query: 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
+G+ + D GN + T P+GV I P+N+P+ + + KI PAL GN++V+K
Sbjct: 141 -QGRTIPMD---GN---FFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVK 193
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249
P Q + ALHM AGFP G+++ V G G G ++ H ++ ++FTG + G
Sbjct: 194 PAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKL 253
Query: 250 ISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVME 306
I + AG L+ +ELGGK +G F + GQ C A V E
Sbjct: 254 IKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEE 313
Query: 307 SVADXXXXXXXXXXXXXXXGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATF-C--Q 362
S+ D G P P + + I L+ K++ A C
Sbjct: 314 SIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG 373
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
+ +G I P + +V DMRIA EE FGPV +++ S+++ I N + +GL +F
Sbjct: 374 PWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIF 433
Query: 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482
T DI+KAI +S A+++GTV +N S PF G K SG G + + T++K+
Sbjct: 434 TNDIDKAITVSSALQSGTVWVNCY-SVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492
Query: 483 VINL 486
I +
Sbjct: 493 TIKI 496
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 142/498 (28%), Positives = 221/498 (44%), Gaps = 26/498 (5%)
Query: 3 VFEEIVDENG---VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVET 59
+ E ++ E G VY + G W SG+ + + +P +V + ++EEV + ++
Sbjct: 5 LLEGVIKEKGGVPVYPSYLAGEW--GGSGQEIEVKSPIDLATIAKVISPSREEVERTLDV 62
Query: 60 A-KLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDL 118
K + S P +R +L KAA I++ AE LV KP AV EV + D
Sbjct: 63 LFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDR 122
Query: 119 VSYCAEEGVRILGEGKLLVSDSFPGNERTKYC----LTSKIPLGVVLAIPPFNYPVNLAV 174
+ AE ++ +G D PG+ L + PLGVV AI PFNYP+ AV
Sbjct: 123 LR-LAELDLKKIG------GDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAV 175
Query: 175 SKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHP 234
+KI + I GN++V+KP + A V AGFP I+ + G E + +
Sbjct: 176 NKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE-AEKIVADD 234
Query: 235 SINCISFTGG-DTGISISKKAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSG 293
+ +SFTG + G + K G+ MELGG +G +SY+G
Sbjct: 235 RVAAVSFTGSTEVGERVVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAG 294
Query: 294 QRCTAVKVALVMESVADXXXXXXXXXXXXXXXGAPED-DCDITPVVTESSANFIEGLVMD 352
QRC A+K+ L V G P D D+ P+++ S+ + + + D
Sbjct: 295 QRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIED 354
Query: 353 AKQKAATFCQEYKREG-NLIWPLLL----DNVRPDMRIAWEEPFGPVLPVIRINSVEEGI 407
A +K +R G + P + D V+ DM + E F PV + + +++ I
Sbjct: 355 AVEKGGRVLAGGRRLGPTYVQPTFVEAPADRVK-DMVLYKREVFAPVALAVEVKDLDQAI 413
Query: 408 HHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQ 467
N +GL VF RD+ K +E G + IN P G ++PF G K SG+ +
Sbjct: 414 ELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFRE 473
Query: 468 GITNSINMMTKIKSTVIN 485
GI ++ +T K+ V N
Sbjct: 474 GIGYAVEAVTAYKTIVFN 491
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 214/482 (44%), Gaps = 25/482 (5%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
F DG + + ++G I P T + ++ A T V + + +AK AQK WA R
Sbjct: 18 FIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARG 77
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILG--EGK 134
+L +AA I++E+ ++ + KP ++ + SG + G
Sbjct: 78 RILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSG-------ADAFEFFGGIAPS 130
Query: 135 LLVSDSFP-GNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
L D P G + + T ++PLGV + I +NYP +A K APAL+AGN++V KP
Sbjct: 131 ALNGDYIPLGGD---FAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSE 187
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISK 252
+ AL + AG PKGL + + G + G L HP + +S TG TG ++
Sbjct: 188 NTPLGALKIAEILIEAGLPKGLFNVIQGD-RDTGPLLVNHPDVAKVSLTGSVPTGRKVAA 246
Query: 253 KAG--MIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVAD 310
A + + MELGGK + G F SGQ C+ V +
Sbjct: 247 AAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKA 306
Query: 311 XXXXXXXXXXXXXXXGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFC------QE 363
G P D + P+V+++ + + K + AT
Sbjct: 307 RFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNN 366
Query: 364 YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 423
EG + P + +V DM IA EE FGPV+ V+ + +E + NA+ FGL G VFT
Sbjct: 367 VAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFT 426
Query: 424 RDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483
D+ +A + D +E GT+ IN+ + P PF G K SG G + ++ +++K+
Sbjct: 427 ADLARAHRVVDGLEAGTLWINTY-NLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVY 485
Query: 484 IN 485
++
Sbjct: 486 VS 487
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 154/490 (31%), Positives = 232/490 (47%), Gaps = 31/490 (6%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA-----QKSWAK 69
+ F DG WR K + INP+T + A T+E+V+ V+ AK A + W+
Sbjct: 9 QLFIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKNGRDWSA 68
Query: 70 TPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE--EGV 127
RA L AA +KE+K + + + KP ++A+ ++ D V C E G+
Sbjct: 69 ASGSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEEALADL----DDVVACFEYYAGL 124
Query: 128 RILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSI 187
+ K S P + Y L K P+GVV I P+NYP +A KIAPAL AG +
Sbjct: 125 AEELDSKQKAPISLPMDTFKSYIL--KEPIGVVALITPWNYPFLMATWKIAPALAAGCAA 182
Query: 188 VLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-T 246
+LKP +V L + G P+G+++ VTG G E G L HP ++ ISFTG T
Sbjct: 183 ILKPSELASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSAT 242
Query: 247 GISISKKAGMI--PLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALV 304
G I A + P+ +ELGGK V G F +GQ C+A +V
Sbjct: 243 GSKIMTTAAQLVKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIV 302
Query: 305 MESVADXXXXXXXXXXXXXXXGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ- 362
ES+A P E+ C + P+V+E+ + + AK + AT
Sbjct: 303 HESIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTG 362
Query: 363 ----EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQ 418
E+ ++G + P ++ +V M+I EE FGPVL V ++ EE I+ N +++GL
Sbjct: 363 GRRPEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLG 422
Query: 419 GCVFTRDINKAILISDAMETGTVQINSA-PSRGPDHFPFQGLKDSGIGSQ----GITN-- 471
V + D+ + +S A++ G V IN A PS P+ G+K SG G + G+ N
Sbjct: 423 SAVMSNDLERCERLSKALQAGIVWINCAQPSF--IQAPWGGIKRSGFGRELGEWGLENYL 480
Query: 472 SINMMTKIKS 481
S+ +T+ S
Sbjct: 481 SVKQVTRYTS 490
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/485 (28%), Positives = 223/485 (45%), Gaps = 26/485 (5%)
Query: 17 FYDGVWRKSSSGKSVT-IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKR 75
++ G KS G + + P T + ++ C EEV++ V++A+ A W+K +R
Sbjct: 23 YWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIER 82
Query: 76 AELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKL 135
+ ++ +AA I++E++ IA+ V K +A ++ + + Y A + G+
Sbjct: 83 SRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQ 142
Query: 136 LVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQG 195
L PG + T + PLGV I +NYP +A K APAL GN++V KP
Sbjct: 143 L-----PGG---AFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMT 194
Query: 196 AVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTG----GDTGISIS 251
V + + FH AG P GL++ V G G+E G L HP++ +SFTG G + +S
Sbjct: 195 PVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS 253
Query: 252 KKAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADX 311
K + + +ELGGK + F GQ CT V +
Sbjct: 254 AKT-VKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQ 312
Query: 312 XXXXXXXXXXXXXXGAPE-DDCDITPVVTESSANFIEGLVMDAKQKAA---------TFC 361
G P + + ++++ + + G V AK++ A T
Sbjct: 313 FLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPS 372
Query: 362 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
+ G + P +LDN R DM EE FGPV+ V+ ++ EE + N + FGL V
Sbjct: 373 DPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGV 432
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
FTRDI++A ++ +E GT IN+ S P PF G K SG G + +++ +++K+
Sbjct: 433 FTRDISRAHRVAANLEAGTCYINTY-SISPVEVPFGGYKMSGFGRENGQATVDYYSQLKT 491
Query: 482 TVINL 486
++ +
Sbjct: 492 VIVEM 496
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 211/488 (43%), Gaps = 18/488 (3%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWK 74
K + +G W +S + + ++NP T++ +V T+E+++ +TA A K+W+K + +
Sbjct: 7 KNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPR 66
Query: 75 RAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGK 134
RA +L +L + K +A + E K K+A+ EV R + V + A G
Sbjct: 67 RARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAA-------GAPS 119
Query: 135 LLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQ 194
L++ DS + P+GVV I PFN+P+ + A+ GN+ +LKP +
Sbjct: 120 LMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSER 179
Query: 195 GAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISKK 253
+ +V F AG PKG+ + V G + L HP I ISF G G + KK
Sbjct: 180 TPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILE-HPEIKAISFVGSKPVGEYVYKK 238
Query: 254 A--GMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADX 311
+ +Q G K V F +G+RC A V V E +AD
Sbjct: 239 GSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADE 298
Query: 312 XXXXXXXXXXXXXXGAPEDD-CDITPVVTESSA----NFIEGLVMDAKQKAATFCQEYKR 366
G DD + PV+ E + ++IE + + + +
Sbjct: 299 FMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSD 358
Query: 367 EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDI 426
+G + P + DNV +M I +E F PVL VIR+ +++E I N S F C+FT +
Sbjct: 359 DGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNS 418
Query: 427 NKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGIT--NSINMMTKIKSTVI 484
N + ++ G + IN FPF G K S G+ +S++ T+ K
Sbjct: 419 NAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTA 478
Query: 485 NLPTPSYT 492
P P +
Sbjct: 479 RYPAPDFN 486
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 224/484 (46%), Gaps = 21/484 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTP 71
K F + W +S SGK+ + NP T + V+ +E+V+K V+ A+ A + W
Sbjct: 22 KLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMD 81
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA-VTEVVRSGDLVSYCAEEGVRIL 130
+R +L++K A +++ + +A K A + ++ + YCA +I
Sbjct: 82 ASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQ 141
Query: 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
G + V F + T P+GV I P+N P+ L KI PAL GN++++K
Sbjct: 142 GR-TIPVDGEF-------FSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVK 193
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249
P Q + ALH+ AGFP G+++ V G G G ++ H ++ ++FTG + G
Sbjct: 194 PAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKM 253
Query: 250 ISK---KAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVME 306
I + K+ + + +ELG K +G F+ GQ C A V E
Sbjct: 254 IQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEE 313
Query: 307 SVADXXXXXXXXXXXXXXXGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATF-C--Q 362
++ D G P + P + ++ N I L+ K++ A C
Sbjct: 314 AIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGG 373
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
+ +G I P + NV DMRIA EE FGPV +++ S++E I N + +GL VF
Sbjct: 374 PWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVF 433
Query: 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482
T+D++KA+ +S A++ GTV +N + P G K SG G + I+ T++K+
Sbjct: 434 TKDLDKAVTVSSALQAGTVWVNCYLAASAQS-PAGGFKMSGHGREMGEYGIHEYTEVKTV 492
Query: 483 VINL 486
+ +
Sbjct: 493 TMKI 496
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 210/468 (44%), Gaps = 23/468 (4%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHF-RVQACTQEEVNKVVETAKLAQKSWAKTPL 72
Y DG + + + INP ++ V TQ+ K ++ A A ++W T
Sbjct: 38 YPLVIDG--ERYETENKIVSINPANKEEVVGTVSKATQDHAEKAIQAAAKAFETWRYTDP 95
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGE 132
+RA +L +A A ++ +K + LVKE KP +A + + D + Y A + + L +
Sbjct: 96 EERAAVLFRAVAKVRRKKHEFSALLVKEAGKPWNEADADTAEAIDFMEYYARQMIE-LAK 154
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
GK + S ER +Y T P GV + IPP+N+ + ++ GN++VLKP
Sbjct: 155 GKPVNSRE---GERNQYVYT---PTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPA 208
Query: 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251
+ V A V +G PKG+++ V G G+E+GD+L HP + I+FTG + G I
Sbjct: 209 SAAPVIAAKFVEVLEESGLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIF 268
Query: 252 KKAGMI-PLQM-------ELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVAL 303
++A + P Q E+GGK F ++GQ+C+A A+
Sbjct: 269 ERAAKVQPGQTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAV 328
Query: 304 VMESVADXXXXXXXXXXXXXXXGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFC- 361
V E V D G P+ D + PV+ ++S N I + K++
Sbjct: 329 VHEKVYDEVLKRVIEITESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGRLVSG 388
Query: 362 -QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC 420
+ +G I P + ++ P R+ EE FGPV+ +++S +E + N + +GL G
Sbjct: 389 GKGDDSKGYFIEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGA 448
Query: 421 VFTRDINKAILISDAMETGTVQINSAPSRG-PDHFPFQGLKDSGIGSQ 467
V T++ + G + N + + PF G K SG S+
Sbjct: 449 VITKNRDHINRAKQEFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSK 496
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 206/460 (44%), Gaps = 16/460 (3%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
+ + DG + + ++NP T R+ E+ K ++ A+ AQ W P
Sbjct: 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAI 66
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+RA L K +A ++E+ + I+ +V+E K + A EV + D + Y AE R EG
Sbjct: 67 ERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRY--EG 124
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
+++ SD PG L K LGV I P+N+P L K+APAL+ GN+IV+KP
Sbjct: 125 EIIQSDR-PGEN----ILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSE 179
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTG---ISI 250
A+ G P+G+ + V G+G +G L +P + +S TG + I
Sbjct: 180 FTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMA 239
Query: 251 SKKAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVAD 310
+ + + +ELGGK V SGQ C + V + + D
Sbjct: 240 TAAKNITKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYD 299
Query: 311 XXXXXXXXXXXXXXXGAPEDDCDIT--PVVTESSANFIEGLVMDAKQKAATFC---QEYK 365
G P + DI P++ ++ +E V A ++ A + +
Sbjct: 300 QFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVE 359
Query: 366 REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 425
+G P LL +VR +M I EE FGPVLPV+ +++E+ I N S++GL ++T++
Sbjct: 360 GKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQN 419
Query: 426 INKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG 465
+N A+ ++ G IN F G + SGIG
Sbjct: 420 LNVAMKAIKGLKFGETYINRENFEAMQGF-HAGWRKSGIG 458
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 215/479 (44%), Gaps = 27/479 (5%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWK 74
K + +G W +S+S +++ +INP T + +V + +V+K VE A + T + +
Sbjct: 9 KQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKE 68
Query: 75 RAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY--CAEEGVRILGE 132
R LL K + +K I + + E+ P +++E V +++ A + +
Sbjct: 69 RQALLDKIVKEYENRKDDIVQAITDELGAPL--SLSERVHYQXGLNHFVAARDAL----- 121
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
D++ ER L K +GV I P+N+P N K+A A AG+ +VLKP
Sbjct: 122 ------DNYEFEERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPS 175
Query: 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTG-GDTGISIS 251
+ AA+ + F G PKG+ + V G G+ +G+ L+ HP + SFTG G TG I
Sbjct: 176 EETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIX 235
Query: 252 KKAG--MIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVA 309
+KA + +ELGGK + +GQ CTA LV +
Sbjct: 236 EKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIK 295
Query: 310 DXXXXXXXXXXXXXXXGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ------ 362
D G P ED + P++++ + ++ + ++ A
Sbjct: 296 DAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP 355
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
E +G P + NV IA EE FGPV VI N ++E I N + +GL G V
Sbjct: 356 EGLEKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVI 415
Query: 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
+D ++ ++E GTV+IN A R PD PF G K SG+G + I ++KS
Sbjct: 416 GKDKETLHKVARSIEAGTVEINEA-GRKPD-LPFGGYKQSGLGREWGDYGIEEFLEVKS 472
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 205/460 (44%), Gaps = 16/460 (3%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
+ + DG + + ++NP T R+ E+ K ++ A+ AQ W P
Sbjct: 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAI 66
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+RA L K +A ++E+ I+ +V+E K + A EV + D + Y AE R EG
Sbjct: 67 ERASWLRKISAGIRERATEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRY--EG 124
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
+++ SD PG L K LGV I P+N+P L K+APAL+ GN+IV+KP
Sbjct: 125 EIIQSDR-PGEN----ILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSE 179
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTG---ISI 250
A+ G P+G+ + V G+G +G L +P + +S TG + I
Sbjct: 180 FTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMA 239
Query: 251 SKKAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVAD 310
+ + + +ELGGK V SGQ C + V + + D
Sbjct: 240 TAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYD 299
Query: 311 XXXXXXXXXXXXXXXGAPEDDCDIT--PVVTESSANFIEGLVMDAKQKAATFC---QEYK 365
G P + DI P++ ++ +E V A ++ A + +
Sbjct: 300 QFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVE 359
Query: 366 REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 425
+G P LL +VR +M I EE FGPVLPV+ +++EE I N S++GL ++T++
Sbjct: 360 GKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQN 419
Query: 426 INKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG 465
+N A+ ++ G IN F G + SGIG
Sbjct: 420 LNVAMKAIKGLKFGETYINRENFEAMQGF-HAGWRKSGIG 458
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 203/436 (46%), Gaps = 20/436 (4%)
Query: 45 VQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKP 104
V Q+ K +++A A ++W +RA +L KAAAI++ +K + LV E KP
Sbjct: 68 VSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKP 127
Query: 105 AKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIP 164
K+A + + D + Y A + + L GK ++S PG E+ +Y T P+GV + I
Sbjct: 128 WKEADADTAEAIDFLEYYARQMIE-LNRGKEILSR--PG-EQNRYFYT---PMGVTVTIS 180
Query: 165 PFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGS 224
P+N+ + + V ++ GN++VLKP + V A V AG PKG+I+ V G G+
Sbjct: 181 PWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGA 240
Query: 225 EIGDFLTMHPSINCISFTGG-DTGISISKKAGMI-PLQ-------MELGGKXXXXXXXXX 275
E+GD+L HP + I+FTG D G+ + ++A ++ P Q +E+GGK
Sbjct: 241 EVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDA 300
Query: 276 XXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXXXXXXXXXXXXGAPED-DCDI 334
+ F +SGQ+C+A A++ + V D G P + D +
Sbjct: 301 DLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYM 360
Query: 335 TPVVTESSANFIEGLVMDAKQ--KAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFG 392
PV+ E + I + K+ + T + G I P ++ ++ P+ I EE FG
Sbjct: 361 GPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFG 420
Query: 393 PVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRG-P 451
PV+ + N + + N + +GL G V TR+ G + N +
Sbjct: 421 PVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIV 480
Query: 452 DHFPFQGLKDSGIGSQ 467
+ PF G K SG S+
Sbjct: 481 GYHPFGGFKMSGTDSK 496
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 206/460 (44%), Gaps = 16/460 (3%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
+ + DG + + ++NP T R+ E+ K ++ A+ AQ W P
Sbjct: 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAI 66
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+RA L K +A ++E+ + I+ +V+E K + A EV + D + Y AE R EG
Sbjct: 67 ERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRY--EG 124
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
+++ SD PG L K LGV I P+N+P L K+APAL+ GN+IV+KP
Sbjct: 125 EIIQSDR-PGEN----ILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSE 179
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTG---ISI 250
A+ G P+G+ + V G+G +G L +P + +S TG + I
Sbjct: 180 FTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMA 239
Query: 251 SKKAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVAD 310
+ + + +ELGGK V SGQ C + V + + D
Sbjct: 240 TAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYD 299
Query: 311 XXXXXXXXXXXXXXXGAPEDDCDIT--PVVTESSANFIEGLVMDAKQKAATFC---QEYK 365
G P + DI P++ ++ +E V A ++ A + +
Sbjct: 300 QFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVE 359
Query: 366 REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 425
+G P LL +VR +M I EE FGPVLPV+ +++E+ I N S++GL ++T++
Sbjct: 360 GKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQN 419
Query: 426 INKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG 465
+N A+ ++ G IN F G + SGIG
Sbjct: 420 LNVAMKAIKGLKFGETYINRENFEAMQGF-HAGWRKSGIG 458
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 199/464 (42%), Gaps = 21/464 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWK 74
K F +G W SG++ I+NP + T +++ + A+ AQK WAK+
Sbjct: 8 KSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTED 67
Query: 75 RAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGE-- 132
R +L KA L E + I + +E + E+ E+ + IL E
Sbjct: 68 RKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIEL-----------EQTIAILDEAM 116
Query: 133 ---GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
G+L P + K ++PLGV+ +I PFN+P+NL++ IAPA+ GNS+V
Sbjct: 117 TYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVH 176
Query: 190 KPPTQGAVAALHMV-HCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDT-G 247
KP Q A++ ++ F AG P G+++ + EIGD + +P ISFTG G
Sbjct: 177 KPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVG 236
Query: 248 ISISKKAG--MIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVM 305
I + AG + +ELGG + G F + GQ C + +V
Sbjct: 237 RHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVH 296
Query: 306 ESVADXXXXXXXXXXXXXXXGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEY 364
+ V D G D + P++ E ++ AK E
Sbjct: 297 QDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEG 356
Query: 365 KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTR 424
KR GN++ P + + +IA E F P+ +I+ S +E I N + +GL VFT
Sbjct: 357 KRVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTS 416
Query: 425 DINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQG 468
D+ K + +++G +N + F G K SG+G G
Sbjct: 417 DLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFG 460
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 141/482 (29%), Positives = 222/482 (46%), Gaps = 25/482 (5%)
Query: 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK-----SW 67
+ + F DG WR + G+ + ++NPTT + A T E+V+ V A+ A K W
Sbjct: 24 LRQLFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRNRGRDW 83
Query: 68 AKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGV 127
A+ P RA+ L AA + E+K +A+ + KP +A ++ Y A++
Sbjct: 84 ARAPGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAWDMDDVAGCFEYFADQAE 143
Query: 128 RILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSI 187
+ VS T C + P+GVV I P+NYP+ +A KIAPAL AG +
Sbjct: 144 ALDKRQNSPVSLPM----ETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTA 199
Query: 188 VLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DT 246
VLKP +V L + G P G+++ VTG G + G L+ HP ++ ++FTG +T
Sbjct: 200 VLKPSELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFET 259
Query: 247 GISISKKAGMI--PLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALV 304
G I A + P+ +ELGGK + G F +GQ C+A L+
Sbjct: 260 GKKIMASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLI 319
Query: 305 MESVADXXXXXXXXXXXXXXXGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ- 362
+A P E+ C + PVV+E I+ + +AK + AT
Sbjct: 320 HTKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTG 379
Query: 363 ----EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQ 418
+ +G I P ++ ++ M I EE FGPVL V ++ +E I N + +GL
Sbjct: 380 GVRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLA 439
Query: 419 GCVFTRDINKAILISDAMETGTVQIN-SAPSRGPDHFPFQGLKDSGIGSQ----GITNSI 473
G V + D + +S+ ++ G + +N S P P+ G K SG G + GI N +
Sbjct: 440 GAVISGDRERCQRLSEEIDAGCIWVNCSQPCFC--QAPWGGNKRSGFGRELGEGGIDNYL 497
Query: 474 NM 475
++
Sbjct: 498 SV 499
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 147/484 (30%), Positives = 223/484 (46%), Gaps = 27/484 (5%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
F G + S+ ++ I++P+T K + A + + +E A+ AQK+WAK R
Sbjct: 16 FIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQ 75
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
+L A ++E K +A LV E K A EV + + Y + + I G
Sbjct: 76 NMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEG----- 130
Query: 137 VSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGA 196
D P + + + K+P GVV+ I +N+P+ LA KI PALI GN++VLKP +
Sbjct: 131 --DILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETP 188
Query: 197 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISKKAG 255
+A + AG P G+++ + G GS +G L P I+ TG G I K +
Sbjct: 189 LATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA 248
Query: 256 --MIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXX 313
M P+ +ELGGK + G F+ GQ CT V+ V SV D
Sbjct: 249 EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFM 308
Query: 314 XXXXXXXXXXXXGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR------ 366
G P D D + P + + I+ +V +A ++ AT K
Sbjct: 309 AKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGF 368
Query: 367 EGNLIW-PLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTR- 424
EG + P +L +V+ D + EE FGP+LP+++++S+E+ I CN S +GL V T+
Sbjct: 369 EGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQS 428
Query: 425 --DINKAILISDAMETGTVQINSAPSRGPDHFPFQ-GLKDSGIGSQGITNSINMMTKIKS 481
+IN+A ISD +E G V IN G H F G K SG G + + + K+
Sbjct: 429 FANINQA--ISD-LEVGEVYINRG--MGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKT 483
Query: 482 TVIN 485
IN
Sbjct: 484 VYIN 487
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 201/456 (44%), Gaps = 15/456 (3%)
Query: 19 DGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAEL 78
+G W ++ G ++ + NP V + + + + ++ + A WA +RA +
Sbjct: 38 NGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGI 97
Query: 79 LHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVS 138
L K ++ IA + E KP +A EV+ + + + AEE R+ G
Sbjct: 98 LRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYG------- 150
Query: 139 DSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVA 198
D+ P + + + P+GV AI P+N+P + K APAL AG +++++P +
Sbjct: 151 DTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLT 210
Query: 199 ALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISISKKAGMIP 258
AL + AG P G++ VTGK EIG LT + ++ +SFT G T + A P
Sbjct: 211 ALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFT-GSTEVGRLLMAQCAP 269
Query: 259 ----LQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXXX 314
+ +ELGG + + +GQ C V V D
Sbjct: 270 TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAE 329
Query: 315 XXXXXXXXXXXG-APEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIW- 372
G E I P++ E + ++ + DA K A K G L +
Sbjct: 330 KLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGLFFE 389
Query: 373 PLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILI 432
P +L V DM +A EE FGP+ P+ ++ EE I N + FGL +T + ++AI +
Sbjct: 390 PGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRV 449
Query: 433 SDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQG 468
S+A+E G V N+ + PF G+K SG+G +G
Sbjct: 450 SEALEYGMVGHNTGLISN-EVAPFGGVKQSGLGREG 484
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 227/480 (47%), Gaps = 27/480 (5%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAK--LAQKSWAKTPL 72
+ + G WR+ + IINP T + + A T E+V+ VE A+ +A+ W T
Sbjct: 25 QLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWGSTTG 84
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE--EGVRIL 130
+RA+ L AA + E+K+ +A + K ++ ++ D V+ C E G+
Sbjct: 85 AQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADM----DDVAGCFEYYAGLAEA 140
Query: 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
+ + + + + Y L + PLGVV I P+NYP+ +A+ K+APAL AG + +LK
Sbjct: 141 LDSRRMTPVNLNSDSYKSYVL--REPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILK 198
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTG-GDTGIS 249
P ++ L + G P G ++ +TG G E G L HP ++ ISFTG G TG
Sbjct: 199 PSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSK 258
Query: 250 ISKKAGMI--PLQMELGGKX-XXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVME 306
I A + P+ +ELGGK + G F+ +GQ C+A +V E
Sbjct: 259 IMTAAAQLVKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQE 318
Query: 307 SVADXXXXXXXXXXXXXXXGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC---- 361
++A P E+DC + PVV+ + + +AK + AT
Sbjct: 319 NIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGE 378
Query: 362 -QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC 420
++ ++G + P ++ +V M I EE FGPVL V + E+ I N + +GL
Sbjct: 379 RPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAA 438
Query: 421 VFTRDINKAILISDAMETGTVQIN-SAPSRGPDHFPFQGLKDSG----IGSQGITNSINM 475
V ++D+ + + A +TG + IN S P+ + P+ G K SG +G G+ N +N+
Sbjct: 439 VMSKDVKRCERFTKAFQTGIIWINCSQPTF--NELPWGGKKRSGFGRDLGKWGLENFLNI 496
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 215/486 (44%), Gaps = 23/486 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTP 71
+ F + W + S K+ +NP+T + +V +E+V+K V+ A+ A + W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE--EGVRI 129
R LL++ A +++ + +A + KP V + D+V C G
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPY---VISYLVDLDMVLKCLRYYAGWAD 137
Query: 130 LGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
GK + D + T P+GV I P+N+P+ + K+ PAL GN +V+
Sbjct: 138 KYHGKTIPIDG------DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVM 191
Query: 190 KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248
K Q + AL++ + AGFP G+++ V G G G + H ++ ++FTG + G
Sbjct: 192 KVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGR 251
Query: 249 SISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVM 305
I AG L+ ++LGGK F GQ C+A V
Sbjct: 252 VIQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQ 311
Query: 306 ESVADXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATF-CQE 363
E + D G P D + P V E+ I G + KQ+ A C
Sbjct: 312 EDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGG 371
Query: 364 --YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
G I P + +V+ M IA EE FGPV+ +++ ++EE + N S +GL V
Sbjct: 372 GIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 431
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
FT+D++KA +S A++ GTV +N G PF G K SG G + + T++K+
Sbjct: 432 FTKDLDKANYLSQALQAGTVWVNCYDVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKT 490
Query: 482 TVINLP 487
+ +P
Sbjct: 491 VTVKVP 496
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 214/486 (44%), Gaps = 23/486 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTP 71
+ F + W + S K+ +NP+T + +V +E+V+K V+ A+ A + W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE--EGVRI 129
R LL++ A +++ + +A + KP V + D+V C G
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPY---VISYLVDLDMVLKCLRYYAGWAD 137
Query: 130 LGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
GK + D + T P+GV I P+N+P+ + K+ PAL GN +V+
Sbjct: 138 KYHGKTIPIDG------DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVM 191
Query: 190 KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248
K Q + AL++ + AGFP G+++ V G G G + H ++ ++FTG + G
Sbjct: 192 KVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGR 251
Query: 249 SISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVM 305
I AG L+ +ELGGK F GQ C A V
Sbjct: 252 VIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQ 311
Query: 306 ESVADXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATF-CQE 363
E + D G P D + P V E+ I G + KQ+ A C
Sbjct: 312 EDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGG 371
Query: 364 --YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
G I P + +V+ M IA EE FGPV+ +++ ++EE + N S +GL V
Sbjct: 372 GIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 431
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
FT+D++KA +S A++ GTV +N G PF G K SG G + + T++K+
Sbjct: 432 FTKDLDKANYLSQALQAGTVWVNCYDVFGAQS-PFGGYKMSGSGQELGEYGLQAYTEVKT 490
Query: 482 TVINLP 487
+ +P
Sbjct: 491 VTVKVP 496
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 214/486 (44%), Gaps = 23/486 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTP 71
+ F + W + S K+ +NP+T + +V +E+V+K V+ A+ A + W +
Sbjct: 15 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 74
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE--EGVRI 129
R LL++ A +++ + +A + KP V + D+V C G
Sbjct: 75 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPY---VISYLVDLDMVLKCLRYYAGWAD 131
Query: 130 LGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
GK + D + T P+GV I P+N+P+ + K+ PAL GN +V+
Sbjct: 132 KYHGKTIPIDG------DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVM 185
Query: 190 KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248
K Q + AL++ + AGFP G+++ V G G G + H ++ ++FTG + G
Sbjct: 186 KVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGR 245
Query: 249 SISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVM 305
I AG L+ +ELGGK F GQ C A V
Sbjct: 246 VIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQ 305
Query: 306 ESVADXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATF-CQE 363
E + D G P D + P V E+ I G + KQ+ A C
Sbjct: 306 EDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGG 365
Query: 364 --YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
G I P + +V+ M IA EE FGPV+ +++ ++EE + N S +GL V
Sbjct: 366 GIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 425
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
FT+D++KA +S A++ GTV +N G PF G K SG G + + T++K+
Sbjct: 426 FTKDLDKANYLSQALQAGTVWVNCYDVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKT 484
Query: 482 TVINLP 487
+ +P
Sbjct: 485 VTVKVP 490
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 214/486 (44%), Gaps = 23/486 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTP 71
+ F + W + S K+ +NP+T + +V +E+V+K V+ A+ A + W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE--EGVRI 129
R LL++ A +++ + +A + KP V + D+V C G
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPY---VISYLVDLDMVLKCLRYYAGWAD 137
Query: 130 LGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
GK + D + T P+GV I P+N+P+ + K+ PAL GN +V+
Sbjct: 138 KYHGKTIPIDG------DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVM 191
Query: 190 KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248
K Q + AL++ + AGFP G+++ V G G G + H ++ ++FTG + G
Sbjct: 192 KVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGR 251
Query: 249 SISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVM 305
I AG L+ +ELGGK F GQ C A V
Sbjct: 252 VIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQ 311
Query: 306 ESVADXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATF-CQE 363
E + D G P D + P V E+ I G + KQ+ A C
Sbjct: 312 EDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGG 371
Query: 364 --YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
G I P + +V+ M IA EE FGPV+ +++ ++EE + N S +GL V
Sbjct: 372 GIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 431
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
FT+D++KA +S A++ GTV +N G PF G K SG G + + T++K+
Sbjct: 432 FTKDLDKANYLSQALQAGTVWVNCYDVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKT 490
Query: 482 TVINLP 487
+ +P
Sbjct: 491 VTVKVP 496
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 188/430 (43%), Gaps = 19/430 (4%)
Query: 65 KSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE 124
K+W P R+ LL KAAA+++ +K + LV E+ K +A +V + D + Y A
Sbjct: 88 KTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYAR 147
Query: 125 EGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAG 184
+R +V +PG + + +PLG + I P+N+PV + I + G
Sbjct: 148 AALRYRYPAVEVVP--YPGEDNESFY----VPLGAGVVIAPWNFPVAIFTGMIVGPVAVG 201
Query: 185 NSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG 244
N+++ KP V + FH AGFP G+++ + G G E+G +L HP I I+FTG
Sbjct: 202 NTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGS 261
Query: 245 -DTGISISKKAGMI-PLQ-------MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQR 295
+ G+ I + AG + P Q +E GGK V + + GQ+
Sbjct: 262 LEVGLKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQK 321
Query: 296 CTAVKVALVMESVADXXXXXXXXXXXXXXXGAPEDDCDITPVVTESSANFIEGLVMDAKQ 355
C+A ++ + + G E++ D+ PVV+ + + K
Sbjct: 322 CSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKN 381
Query: 356 KAATFC--QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNAS 413
+ + + EG I P + V P RIA EE FGPVL VIR+ E + N +
Sbjct: 382 EGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDT 441
Query: 414 NFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHF-PFQGLKDSGIGSQ-GITN 471
+GL G V++R G + N + PF G K SG ++ G +
Sbjct: 442 PYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALD 501
Query: 472 SINMMTKIKS 481
+ + ++K+
Sbjct: 502 YLRLFLEMKA 511
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 188/430 (43%), Gaps = 19/430 (4%)
Query: 65 KSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE 124
K+W P R+ LL KAAA+++ +K + LV E+ K +A +V + D + Y A
Sbjct: 88 KTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYAR 147
Query: 125 EGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAG 184
+R +V +PG + + +PLG + I P+N+PV + I + G
Sbjct: 148 AALRYRYPAVEVVP--YPGEDNESFY----VPLGAGVVIAPWNFPVAIFTGMIVGPVAVG 201
Query: 185 NSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG 244
N+++ KP V + FH AGFP G+++ + G G E+G +L HP I I+FTG
Sbjct: 202 NTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGS 261
Query: 245 -DTGISISKKAGMI-PLQ-------MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQR 295
+ G+ I + AG + P Q +E GGK V + + GQ+
Sbjct: 262 LEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQK 321
Query: 296 CTAVKVALVMESVADXXXXXXXXXXXXXXXGAPEDDCDITPVVTESSANFIEGLVMDAKQ 355
C+A ++ + + G E++ D+ PVV+ + + K
Sbjct: 322 CSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKN 381
Query: 356 KAATFC--QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNAS 413
+ + + EG I P + V P RIA EE FGPVL VIR+ E + N +
Sbjct: 382 EGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDT 441
Query: 414 NFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHF-PFQGLKDSGIGSQ-GITN 471
+GL G V++R G + N + PF G K SG ++ G +
Sbjct: 442 PYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALD 501
Query: 472 SINMMTKIKS 481
+ + ++K+
Sbjct: 502 YLRLFLEMKA 511
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 221/494 (44%), Gaps = 36/494 (7%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
F G + S SG++ ++P T + + EV++ + A A + W++T +R
Sbjct: 30 FIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERK 89
Query: 77 ELLHKAAAILKEQKAPIA--ECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGK 134
L + A ++++ +A ECL + + + +V R+ + ++ AE + +
Sbjct: 90 RYLLRIAELIEKHADELAVMECL--DAGQVLRIVRAQVARAAENFAFYAEYAEHAMED-- 145
Query: 135 LLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQ 194
+FP + Y T ++P G V I P+N P+ L+ +IAPAL GN++VLKP
Sbjct: 146 ----RTFPVDRDWLYY-TVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEW 200
Query: 195 GAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTG-GDTGISISKK 253
A + A P G+ + V G G E G L HP + ++ TG +TG + +
Sbjct: 201 SPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRN 260
Query: 254 AG--MIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADX 311
A + L ELGGK V FS++G+RCTA LV E + +
Sbjct: 261 AADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFED 320
Query: 312 XXXXXXXXXXXXXXGAPED-DCDITPVVTESSANFIEGLVMDAKQKAA-----------T 359
G P D + ++ P++ + G V K++ A +
Sbjct: 321 FVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTS 380
Query: 360 FCQEYKREGNLIWPLLL--DNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGL 417
F E GN + P + +N M+IA EE FGPVL I EE + N + +GL
Sbjct: 381 FRGEDLSRGNYLLPTVFVGEN---HMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGL 437
Query: 418 QGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHF--PFQGLKDSGIGSQGITNSINM 475
VFTRD+ +A ++ +E G V +NS R H PF G+K SG +G T +++
Sbjct: 438 AAYVFTRDLERAHRLALELEAGMVYLNSHNVR---HLPTPFGGVKGSGDRREGGTYALDF 494
Query: 476 MTKIKSTVINLPTP 489
T +K+ + L P
Sbjct: 495 YTDLKTIALPLRPP 508
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 212/481 (44%), Gaps = 18/481 (3%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS--WAKTP 71
Y+ F G + + K+ INPT +V +V+K V AK A ++ W K
Sbjct: 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKIN 96
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRIL 130
R LL++ A ++++ + +A + A+ T V S Y A +I
Sbjct: 97 ARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQ 156
Query: 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
G + ++ + P T LT K P+GV + P+NYP+ + K A L AGN++V+K
Sbjct: 157 G-ATIPINQARPNRNLT---LTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIK 212
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249
P + AL AG PKG+++ + G GS +G L+ HP + I FTG + G
Sbjct: 213 PAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 272
Query: 250 ISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVME 306
I K + ++ +ELGGK + F G+ C A V E
Sbjct: 273 IMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEE 332
Query: 307 SVADXXXXXXXXXXXXXXXGAP-EDDCDITPVVTESS-ANFIEGLVMDAKQKAATFC--Q 362
S+ + G P E D + P E+ +E K+ A C
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI--NSVEEGIHHCNASNFGLQGC 420
+ R G P + +V M IA EE FGP++ + R V+ + NA+ FGL
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 421 VFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480
VFTRDINKA+ +SD ++ GTV IN+ ++ PF G K SG G ++N +IK
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTY-NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIK 511
Query: 481 S 481
+
Sbjct: 512 T 512
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 140/480 (29%), Positives = 222/480 (46%), Gaps = 25/480 (5%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK-----SWAK 69
+ F +G W+ K + +INP T+ + A T+E+V+ V AK A WA
Sbjct: 9 QLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWAT 68
Query: 70 TPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRI 129
RA L AA + E+K +A+ + KP +A ++ Y A+ ++
Sbjct: 69 ASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKL 128
Query: 130 LGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
K VS P + + L + P+GVV I P+NYP+ +A K+APAL AG + +L
Sbjct: 129 DARQKAPVS--LPMDTFKSHVL--REPIGVVGLITPWNYPMLMATWKVAPALAAGCAAIL 184
Query: 190 KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGI 248
KP ++ L + G P G+++ +TG G E G L HP ++ ++FTG TG
Sbjct: 185 KPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGS 244
Query: 249 SISKKAGMI--PLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVME 306
I A + P+ +ELGGK + G F +GQ C+A ++ E
Sbjct: 245 KIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHE 304
Query: 307 SVADXXXXXXXXXXXXXXXGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ--- 362
S+A P E+ C + PVV+E I V +AK + AT
Sbjct: 305 SIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGS 364
Query: 363 --EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC 420
E+ ++G I P ++ +V +M+I EE FGPVL V ++ EE I N + +GL
Sbjct: 365 RPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAA 424
Query: 421 VFTRDINKAILISDAMETGTVQIN-SAPSRGPDHFPFQGLKDSGIGSQ----GITNSINM 475
V + D+ + ++ A + G V +N S P P+ G+K SG G + G+ N +++
Sbjct: 425 VISNDLERCERVTKAFKAGIVWVNCSQPCF--TQAPWGGVKRSGFGRELGEWGLDNYLSV 482
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/480 (28%), Positives = 226/480 (47%), Gaps = 27/480 (5%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAK--LAQKSWAKTPL 72
+ + G WR+ + IINP T + + A T E+V+ VE A+ +A+ W T
Sbjct: 25 QLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWGSTTG 84
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE--EGVRIL 130
+RA+ L AA + E+K+ +A + K ++ ++ D V+ C E G+
Sbjct: 85 AQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADM----DDVAGCFEYYAGLAEA 140
Query: 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
+ + + + + Y L + PLGVV I P+NYP+ +A+ K+APAL AG + +LK
Sbjct: 141 LDSRRMTPVNLNSDSYKSYVL--REPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILK 198
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTG-GDTGIS 249
P ++ L + G P G ++ +TG G E G L HP ++ ISFTG G TG
Sbjct: 199 PSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSK 258
Query: 250 ISKKAGMI--PLQMELGGKX-XXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVME 306
I A + P+ + LGGK + G F+ +GQ C+A +V E
Sbjct: 259 IMTAAAQLVKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQE 318
Query: 307 SVADXXXXXXXXXXXXXXXGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC---- 361
++A P E+DC + PVV+ + + +AK + AT
Sbjct: 319 NIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGE 378
Query: 362 -QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC 420
++ ++G + P ++ +V M I EE FGPVL V + E+ I N + +GL
Sbjct: 379 RPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAA 438
Query: 421 VFTRDINKAILISDAMETGTVQIN-SAPSRGPDHFPFQGLKDSG----IGSQGITNSINM 475
V ++D+ + + A +TG + IN S P+ + P+ G K SG +G G+ N +N+
Sbjct: 439 VMSKDVKRCERFTKAFQTGIIWINCSQPTF--NELPWGGKKRSGFGRDLGKWGLENFLNI 496
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 213/486 (43%), Gaps = 23/486 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTP 71
+ F + W + S K+ +NP+T + +V +E+V+K V+ A+ A + W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE--EGVRI 129
R LL++ A +++ + +A + KP V + D+V C G
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPY---VISYLVDLDMVLKCLRYYAGWAD 137
Query: 130 LGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
GK + D + T P+GV I P+N+P+ + K+ PAL GN +V+
Sbjct: 138 KYHGKTIPIDG------DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVM 191
Query: 190 KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248
K Q + AL++ + AGFP G+++ V G G G + H ++ ++F G + G
Sbjct: 192 KVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGR 251
Query: 249 SISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVM 305
I AG L+ +ELGGK F GQ C A V
Sbjct: 252 VIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQ 311
Query: 306 ESVADXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATF-CQE 363
E + D G P D + P V E+ I G + KQ+ A C
Sbjct: 312 EDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGG 371
Query: 364 --YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
G I P + +V+ M IA EE FGPV+ +++ ++EE + N S +GL V
Sbjct: 372 GIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 431
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
FT+D++KA +S A++ GTV +N G PF G K SG G + + T++K+
Sbjct: 432 FTKDLDKANYLSQALQAGTVWVNCYDVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKT 490
Query: 482 TVINLP 487
+ +P
Sbjct: 491 VTVKVP 496
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/481 (28%), Positives = 212/481 (44%), Gaps = 18/481 (3%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS--WAKTP 71
Y+ F G + + K+ INPT +V +V+K V AK A ++ W K
Sbjct: 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKIN 96
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRIL 130
R LL++ A ++++ + +A + A+ T V S Y A +I
Sbjct: 97 ARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQ 156
Query: 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
G + ++ + P T LT K P+GV + P+NYP+ + K A L AGN++V+K
Sbjct: 157 G-ATIPINQARPNRNLT---LTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIK 212
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249
P + AL AG PKG+++ + G GS +G L+ HP + I FTG + G
Sbjct: 213 PAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 272
Query: 250 ISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVME 306
I K + ++ ++LGGK + F G+ C A V E
Sbjct: 273 IMKSCALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEE 332
Query: 307 SVADXXXXXXXXXXXXXXXGAP-EDDCDITPVVTESS-ANFIEGLVMDAKQKAATFC--Q 362
S+ + G P E D + P E+ +E K+ A C
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI--NSVEEGIHHCNASNFGLQGC 420
+ R G P + +V M IA EE FGP++ + R V+ + NA+ FGL
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 421 VFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480
VFTRDINKA+ +SD ++ GTV IN+ ++ PF G K SG G ++N +IK
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTY-NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIK 511
Query: 481 S 481
+
Sbjct: 512 T 512
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 138/481 (28%), Positives = 211/481 (43%), Gaps = 18/481 (3%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS--WAKTP 71
Y+ F G + + K+ INPT +V +V+K V AK A ++ W K
Sbjct: 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKIN 96
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRIL 130
R LL++ A ++++ + +A + A+ T V S Y A +I
Sbjct: 97 ARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQ 156
Query: 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
G + ++ + P T LT K P+GV + P+NYP+ + K A L AGN++V+K
Sbjct: 157 G-ATIPINQARPNRNLT---LTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIK 212
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249
P + AL AG PKG+++ + G GS +G L+ HP + I FTG + G
Sbjct: 213 PAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 272
Query: 250 ISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVME 306
I K + ++ + LGGK + F G+ C A V E
Sbjct: 273 IMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEE 332
Query: 307 SVADXXXXXXXXXXXXXXXGAP-EDDCDITPVVTESS-ANFIEGLVMDAKQKAATFC--Q 362
S+ + G P E D + P E+ +E K+ A C
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI--NSVEEGIHHCNASNFGLQGC 420
+ R G P + +V M IA EE FGP++ + R V+ + NA+ FGL
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 421 VFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480
VFTRDINKA+ +SD ++ GTV IN+ ++ PF G K SG G ++N +IK
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTY-NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIK 511
Query: 481 S 481
+
Sbjct: 512 T 512
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 215/490 (43%), Gaps = 24/490 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRV--QACTQEEVNKVVETAKLAQKSWAKTPL 72
K F G W K S+ + + P T + +V A + A W TP
Sbjct: 10 KLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPP 69
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGE 132
+RA ++ A +L E+K + L E +P ++ + +
Sbjct: 70 HERAAVIAAAVKMLAERKDLFTKLLAAETGQPPT-----IIETMHWMGSMGAMNYFAGAA 124
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
K+ +++ G+ + S+ P+GVV AI +N P+ LAV+KIAPAL+AG +IVLKP
Sbjct: 125 DKVTWTETRTGS--YGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPA 182
Query: 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDT-GISIS 251
+ + A + F G P+G++S V G G E G LT +P I+ +FTG G +
Sbjct: 183 AETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVG 241
Query: 252 KKAG--MIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVA 309
++A + P +ELGGK V G +GQ C L S
Sbjct: 242 RRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRY 301
Query: 310 DXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATF-CQEYKRE 367
D G P D I P+++E +EG + ++ A C + E
Sbjct: 302 DEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPE 361
Query: 368 ----GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 423
G I P + +V M IA EE FGPVL +I ++ E+ I N S +GL G V+T
Sbjct: 362 GLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWT 421
Query: 424 RDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483
D+ K I IS + TGT IN + P PF G K+SGIG + + T+ KS +
Sbjct: 422 TDVPKGIKISQQIRTGTYGINWY-AFDPGS-PFGGYKNSGIGRENGPEGVEHFTQQKSVL 479
Query: 484 INLPTPSYTV 493
+ + YTV
Sbjct: 480 LPM---GYTV 486
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 213/486 (43%), Gaps = 23/486 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTP 71
+ F + W + S K+ +NP+T + +V +E+V+K V+ A+ A + W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE--EGVRI 129
R LL++ A +++ + +A + KP V + D+V C G
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPY---VISYLVDLDMVLKCLRYYAGWAD 137
Query: 130 LGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
GK + D + T P+GV I P+N+P+ + K+ PAL GN +V+
Sbjct: 138 KYHGKTIPIDG------DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVM 191
Query: 190 KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248
K Q + AL++ + AGFP G+++ V G G G + H ++ ++FTG + G
Sbjct: 192 KVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGR 251
Query: 249 SISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVM 305
I AG L+ +ELGGK F GQ A V
Sbjct: 252 VIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQ 311
Query: 306 ESVADXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATF-CQE 363
E + D G P D + P V E+ I G + KQ+ A C
Sbjct: 312 EDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGG 371
Query: 364 --YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
G I P + +V+ M IA EE FGPV+ +++ ++EE + N S +GL V
Sbjct: 372 GIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 431
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
FT+D++KA +S A++ GTV +N G PF G K SG G + + T++K+
Sbjct: 432 FTKDLDKANYLSQALQAGTVWVNCYDVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKT 490
Query: 482 TVINLP 487
+ +P
Sbjct: 491 VTVKVP 496
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 213/486 (43%), Gaps = 23/486 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTP 71
+ F + W + S K+ +NP+T + +V +E+V+K V+ A+ A + W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE--EGVRI 129
R LL++ A +++ + +A + KP V + D+V C G
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPY---VISYLVDLDMVLKCLRYYAGWAD 137
Query: 130 LGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
GK + D + T P+GV I P+N+P+ + K+ PAL GN +V+
Sbjct: 138 KYHGKTIPIDG------DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVM 191
Query: 190 KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248
K Q + AL++ + AGFP G+++ V G G G + H ++ ++FTG + G
Sbjct: 192 KVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGR 251
Query: 249 SISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVM 305
I AG L+ +ELGGK F GQ A V
Sbjct: 252 VIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQ 311
Query: 306 ESVADXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATF-CQE 363
E + D G P D + P V E+ I G + KQ+ A C
Sbjct: 312 EDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGG 371
Query: 364 --YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
G I P + +V+ M IA EE FGPV+ +++ ++EE + N S +GL V
Sbjct: 372 GIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 431
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
FT+D++KA +S A++ GTV +N G PF G K SG G + + T++K+
Sbjct: 432 FTKDLDKANYLSQALQAGTVWVNCYDVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKT 490
Query: 482 TVINLP 487
+ +P
Sbjct: 491 VTVKVP 496
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 187/430 (43%), Gaps = 19/430 (4%)
Query: 65 KSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE 124
K+W P R+ LL KAAA+++ +K + LV E+ K +A +V + D + Y A
Sbjct: 88 KTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYAR 147
Query: 125 EGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAG 184
+R +V +PG + + +PLG + I P+N+PV + I + G
Sbjct: 148 AALRYRYPAVEVVP--YPGEDNESFY----VPLGAGVVIAPWNFPVAIFTGMIVGPVAVG 201
Query: 185 NSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG 244
N+++ KP V + FH AGFP G+++ + G G E+G +L HP I I+FTG
Sbjct: 202 NTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGS 261
Query: 245 -DTGISISKKAGMI-PLQ-------MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQR 295
+ G+ I + AG + P Q +E GGK V + + GQ+
Sbjct: 262 LEVGLKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQK 321
Query: 296 CTAVKVALVMESVADXXXXXXXXXXXXXXXGAPEDDCDITPVVTESSANFIEGLVMDAKQ 355
+A ++ + + G E++ D+ PVV+ + + K
Sbjct: 322 XSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKN 381
Query: 356 KAATFC--QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNAS 413
+ + + EG I P + V P RIA EE FGPVL VIR+ E + N +
Sbjct: 382 EGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDT 441
Query: 414 NFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHF-PFQGLKDSGIGSQ-GITN 471
+GL G V++R G + N + PF G K SG ++ G +
Sbjct: 442 PYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALD 501
Query: 472 SINMMTKIKS 481
+ + ++K+
Sbjct: 502 YLRLFLEMKA 511
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 195/428 (45%), Gaps = 48/428 (11%)
Query: 67 WAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEG 126
W T RAE L KAA +++ ++ V EI K A +V + D + Y A E
Sbjct: 584 WRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREM 643
Query: 127 VRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNS 186
+R+ G+ PG E Y P GV I P+N+P+ +++ + A++ GN
Sbjct: 644 IRL---GQPQRVGHAPG-ELNHYFYE---PKGVAAVIAPWNFPLAISMGMASAAIVTGNC 696
Query: 187 IVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-D 245
+V KP ++ H+V F AG P+G+ + G+GS +GD+L HP I+ I+FTG +
Sbjct: 697 VVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSME 756
Query: 246 TGISISKKAGMI-PLQM-------ELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCT 297
TG+ I ++A + P Q E+GGK + F + GQ+C+
Sbjct: 757 TGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCS 816
Query: 298 AVKVALVMESVADXXXXXXXXXXXXXXXGAPEDDCDITPVVTESSANFIEGLVMDAKQKA 357
A +V+++V D G ED AN++ G V D KA
Sbjct: 817 ACSRVIVLDAVYDKFIERLVSMAKATKVGPSED-----------PANYM-GAVAD--DKA 862
Query: 358 ATFCQEY----KREGNLIW------------PL-LLDNVRPDMRIAWEEPFGPVLPVIRI 400
+EY KREG++++ P+ ++ ++P+ RIA EE FGPVL V+R
Sbjct: 863 MKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRA 922
Query: 401 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRG-PDHFPFQGL 459
++ I N++ F L G +F+R G + IN + + PF G
Sbjct: 923 KDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGA 982
Query: 460 KDSGIGSQ 467
+ SG+G++
Sbjct: 983 RMSGVGTK 990
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/481 (28%), Positives = 211/481 (43%), Gaps = 18/481 (3%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS--WAKTP 71
Y+ F G + + K+ INPT +V +V+K V AK A ++ W K
Sbjct: 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKIN 96
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRIL 130
R LL++ A ++++ + +A + A+ T V S Y A +I
Sbjct: 97 ARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQ 156
Query: 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
G + ++ + P T LT K P+GV + P+NYP+ + K A L AGN++V+K
Sbjct: 157 G-ATIPINQARPNRNLT---LTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIK 212
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249
P + AL AG PKG+++ + G GS +G L+ HP + I FTG + G
Sbjct: 213 PAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 272
Query: 250 ISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVME 306
I K + ++ +ELGGK + F G+ A V E
Sbjct: 273 IMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEE 332
Query: 307 SVADXXXXXXXXXXXXXXXGAP-EDDCDITPVVTESS-ANFIEGLVMDAKQKAATFC--Q 362
S+ + G P E D + P E+ +E K+ A C
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI--NSVEEGIHHCNASNFGLQGC 420
+ R G P + +V M IA EE FGP++ + R V+ + NA+ FGL
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 421 VFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480
VFTRDINKA+ +SD ++ GTV IN+ ++ PF G K SG G ++N +IK
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTY-NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIK 511
Query: 481 S 481
+
Sbjct: 512 T 512
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/481 (28%), Positives = 211/481 (43%), Gaps = 18/481 (3%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS--WAKTP 71
Y+ F G + + K+ INPT +V +V+K V AK A ++ W K
Sbjct: 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKIN 96
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRIL 130
R LL++ A ++++ + +A + A+ T V S Y A +I
Sbjct: 97 ARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQ 156
Query: 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
G + ++ + P T LT K P+GV + P+NYP+ + K A L AGN++V+K
Sbjct: 157 G-ATIPINQARPNRNLT---LTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIK 212
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249
P + AL AG PKG+++ + G GS +G L+ HP + I FTG + G
Sbjct: 213 PAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 272
Query: 250 ISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVME 306
I K + ++ +ELGGK + F G+ A V E
Sbjct: 273 IMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEE 332
Query: 307 SVADXXXXXXXXXXXXXXXGAP-EDDCDITPVVTESS-ANFIEGLVMDAKQKAATFC--Q 362
S+ + G P E D + P E+ +E K+ A C
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI--NSVEEGIHHCNASNFGLQGC 420
+ R G P + +V M IA EE FGP++ + R V+ + NA+ FGL
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 421 VFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480
VFTRDINKA+ +SD ++ GTV IN+ ++ PF G K SG G ++N +IK
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTY-NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIK 511
Query: 481 S 481
+
Sbjct: 512 T 512
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 205/466 (43%), Gaps = 23/466 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTP 71
+ F + W + S K+ +NP+T + +V +E+V+K V+ A+ A + W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE--EGVRI 129
R LL++ A +++ + +A + KP V + D+V C G
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPY---VISYLVDLDMVLKCLRYYAGWAD 137
Query: 130 LGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
GK + D + T P+GV I P+N+P+ + K+ PAL GN +V+
Sbjct: 138 KYHGKTIPIDG------DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVM 191
Query: 190 KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248
K Q + AL++ + AGFP G+++ V G G G + H ++ ++FTG + G
Sbjct: 192 KVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGR 251
Query: 249 SISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVM 305
I AG L+ +ELGGK F GQ C A V
Sbjct: 252 VIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQ 311
Query: 306 ESVADXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATF-CQE 363
E + D G P D + P V E+ I G + KQ+ A C
Sbjct: 312 EDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGG 371
Query: 364 --YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
G I P + +V+ M IA EE FGPV+ +++ ++EE + N S +GL V
Sbjct: 372 GIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 431
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQ 467
FT+D++KA +S A++ GTV +N G PF G K SG G +
Sbjct: 432 FTKDLDKANYLSQALQAGTVWVNCYDVFGAQS-PFGGYKMSGSGRE 476
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 210/481 (43%), Gaps = 18/481 (3%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS--WAKTP 71
Y+ F G + + K+ INPT +V +V+K V AK A ++ W K
Sbjct: 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKIN 96
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRIL 130
R LL++ A ++++ + +A + A+ T V S Y A +I
Sbjct: 97 ARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQ 156
Query: 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
G + ++ + P T LT K P+GV + P+NYP+ + K A L AGN++V+K
Sbjct: 157 G-ATIPINQARPNRNLT---LTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIK 212
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249
P + AL AG PKG+++ + G GS +G L+ HP + I FTG + G
Sbjct: 213 PAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 272
Query: 250 ISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVME 306
I K + ++ + LGGK + F G+ A V E
Sbjct: 273 IMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEE 332
Query: 307 SVADXXXXXXXXXXXXXXXGAP-EDDCDITPVVTESS-ANFIEGLVMDAKQKAATFC--Q 362
S+ + G P E D + P E+ +E K+ A C
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI--NSVEEGIHHCNASNFGLQGC 420
+ R G P + +V M IA EE FGP++ + R V+ + NA+ FGL
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 421 VFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480
VFTRDINKA+ +SD ++ GTV IN+ ++ PF G K SG G ++N +IK
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTY-NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIK 511
Query: 481 S 481
+
Sbjct: 512 T 512
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 210/464 (45%), Gaps = 20/464 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWK 74
KF+ +G+W S+ + +I+P+T + + + + +K + AK A ++W T +
Sbjct: 27 KFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHE 86
Query: 75 RAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGK 134
R + K I +++ + +A+ + E+ P A+ +G + + +
Sbjct: 87 RLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQE 146
Query: 135 LLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQ 194
L+ GNE+ + +GVV I P+N+P+N K+ PAL+AG ++VLKP
Sbjct: 147 ALIE----GNEQ---AILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEI 199
Query: 195 GAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISKK 253
++A+ A P G+ + + G G+ +G +L+ HP + ISFTG G ISK
Sbjct: 200 APLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKN 259
Query: 254 AG--MIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADX 311
A + + +ELGGK V+ F SGQ C A LV +++ D
Sbjct: 260 ASNTLKRVCLELGGK-GANIIFADADIDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDK 318
Query: 312 XXXXXXXXXXXXXXG-APEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK----- 365
G + I PVV++ + I+ L+ + AT
Sbjct: 319 AIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMG 378
Query: 366 -REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTR 424
G + P + +V+P MRI EE FGPVL ++ N+ +E + N + +GL + ++
Sbjct: 379 MERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQ 438
Query: 425 DINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQG 468
D +K I+ + +G V++N G + F G+K SG +G
Sbjct: 439 DRSKCRRIAAQVRSGMVEVNGHELPGGSY--FGGVKFSGRAREG 480
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 204/466 (43%), Gaps = 23/466 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTP 71
+ F + W + S K+ +NP+T + +V +E+V+K V+ A+ A + W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE--EGVRI 129
R LL++ A +++ + +A + KP V + D+V C G
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPY---VISYLVDLDMVLKCLRYYAGWAD 137
Query: 130 LGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
GK + D + T P+GV I P+N+P+ + K+ PAL GN +V+
Sbjct: 138 KYHGKTIPIDG------DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVM 191
Query: 190 KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248
K Q + AL++ + AGFP G+++ V G G G + H ++ ++FTG + G
Sbjct: 192 KVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGR 251
Query: 249 SISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVM 305
I AG L+ +ELGGK F GQ A V
Sbjct: 252 VIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQ 311
Query: 306 ESVADXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATF-CQE 363
E + D G P D + P V E+ I G + KQ+ A C
Sbjct: 312 EDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGG 371
Query: 364 --YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
G I P + +V+ M IA EE FGPV+ +++ ++EE + N S +GL V
Sbjct: 372 GIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 431
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQ 467
FT+D++KA +S A++ GTV +N G PF G K SG G +
Sbjct: 432 FTKDLDKANYLSQALQAGTVWVNCYDVFGAQS-PFGGYKMSGSGRE 476
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 209/486 (43%), Gaps = 23/486 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTP 71
+ F + W + S K+ +NP+T V + +V++ V+ A+ A + W +
Sbjct: 20 QIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSPWRRMD 79
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE--EGVRI 129
+R LL++ A +++ + +A + KP + + D+V C G
Sbjct: 80 ASERGRLLNRLADLIERDRTYLAALETLDNGKPY---IISYLVDLDMVLKCLRYYAGWAD 136
Query: 130 LGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
GK + D + T P+GV I P+N+P+ + K+ PAL GN +V+
Sbjct: 137 KYHGKTIPIDG------DYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVM 190
Query: 190 KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248
K Q + AL++ + AGFP G+++ + G G G + H ++ ++FTG + G
Sbjct: 191 KVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGH 250
Query: 249 SISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVM 305
I AG L+ +E+GGK F GQ C A V
Sbjct: 251 LIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQ 310
Query: 306 ESVADXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATFC--- 361
E + G P D + P V E+ + G + K++
Sbjct: 311 EDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGG 370
Query: 362 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
G I P + +++ M IA EE FGPV+ +++ S+EE + N S +GL V
Sbjct: 371 GAAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAV 430
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
FT+D++KA +S A++ GTV +N G PF G K SG G + + T++K+
Sbjct: 431 FTKDLDKANYLSQALQAGTVWVNCYDVFGAQS-PFGGYKLSGSGRELGEYGLQAYTEVKT 489
Query: 482 TVINLP 487
+ +P
Sbjct: 490 VTVRVP 495
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 170/387 (43%), Gaps = 18/387 (4%)
Query: 67 WAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEG 126
W++TP RA L +AA +L+ + A L +E K DA++E+ + D Y A +G
Sbjct: 566 WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAAQG 625
Query: 127 VRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNS 186
++ G + PG LT + GV +AI P+N+P+ + + ++ AL+AGNS
Sbjct: 626 RKLFGS-----ETAMPGPTGESNALTMR-GRGVFVAISPWNFPLAIFLGQVTAALMAGNS 679
Query: 187 IVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-D 245
+V KP Q A V H AG PK + VTG G IG LT HP I + FTG +
Sbjct: 680 VVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDG-RIGAALTAHPDIAGVVFTGSTE 738
Query: 246 TGISI-----SKKAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVK 300
SI +K ++PL E GG V F +GQRC+A++
Sbjct: 739 VARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALR 798
Query: 301 VALVMESVADXXXXXXXXXXXXXXXGAPED-DCDITPVVTESSANFIEGLVMDAKQKAAT 359
+ V E VAD G P D + PV+ + ++ + K +A
Sbjct: 799 LLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL 858
Query: 360 FCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN--SVEEGIHHCNASNFGL 417
EG + P + + EE FGP+L V+R ++E + + +GL
Sbjct: 859 HFAGPAPEGCFVAPHIFELTEAGQLT--EEVFGPILHVVRYRPENLERVLRAIERTGYGL 916
Query: 418 QGCVFTRDINKAILISDAMETGTVQIN 444
V +R + I D ++ G + +N
Sbjct: 917 TLGVHSRIDDSIEAIIDRVQVGNIYVN 943
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 184/425 (43%), Gaps = 19/425 (4%)
Query: 67 WAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEG 126
W + +R+ LL K ++ + K +A + E KP K+A E++ S + + +EE
Sbjct: 64 WREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEA 123
Query: 127 VRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNS 186
R+ G D + + L K P+GV I P+N+P + K+ AL AG +
Sbjct: 124 RRVYG-------DIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCT 176
Query: 187 IVLKPPTQGAVAALHMVHCFHLAGFPKGL---ISCVTGKGSEIGDFLTMHPSINCISFTG 243
+V+KP +AL + AG P G+ I C E+G+ + P ++ ISFTG
Sbjct: 177 VVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTG 236
Query: 244 GDT--GISISKKAGMIP-LQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVK 300
T I + A + + MELGG + F +GQ C
Sbjct: 237 STTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSN 296
Query: 301 VALVMESVADXXXXXXXXXXXXXXX--GAPEDDCDITPVVTESSANFIEGLVMDAKQKAA 358
LV + D E+ P++ E + +E V DA K A
Sbjct: 297 QFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGA 356
Query: 359 TFCQEYKRE---GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNF 415
T KR N P LL NV DM EE FGP+ PVI+ ++ EE I NA++
Sbjct: 357 TVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADV 416
Query: 416 GLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINM 475
GL G +++D + +++ +E G V +N + PF G+K SG+G +G I+
Sbjct: 417 GLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVE-CPFGGVKQSGLGREGSKYGIDE 475
Query: 476 MTKIK 480
++K
Sbjct: 476 YLELK 480
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 206/477 (43%), Gaps = 34/477 (7%)
Query: 25 SSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAA 84
S G+ + NP T + + E+V+ V A A W +T RAE L K A
Sbjct: 34 SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLAD 93
Query: 85 ILKEQKAPIAECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPG 143
+++E AE + KP A E+ D+ + A + G L + G
Sbjct: 94 VIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNG---LAAGEYLEG 150
Query: 144 NERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMV 203
+ + + PLGVV +I P+NYP+ +A K+APAL AGN +VLKP + AL +
Sbjct: 151 HT----SMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLA 206
Query: 204 HCFHLAG--FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS-ISKKAGMIP- 258
LA FP G+++ + G+G +GD LT HP + +S TG TG IS A I
Sbjct: 207 ---ELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKR 263
Query: 259 LQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXXXXX 318
MELGGK G+ +GQ CTA + + D
Sbjct: 264 THMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGA 323
Query: 319 XXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAKQ----KAATFCQEYKREGNLIWP 373
GAP+D+ ++ P+ + + + V +AK K T ++ K G P
Sbjct: 324 AVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAP 383
Query: 374 LLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILIS 433
LL D I +E FGPV+ V ++ E+ ++ N S +GL V+T+D+ +A +S
Sbjct: 384 TLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVS 443
Query: 434 DAMETGTVQINSAPSRGPDHF------PFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
++ G +N+ HF P G K SG G + T ++ ++
Sbjct: 444 ARLQYGCTWVNT-------HFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMV 493
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 183/425 (43%), Gaps = 19/425 (4%)
Query: 67 WAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEG 126
W + +R+ LL K ++ + K +A + E KP K+A E++ S + + +EE
Sbjct: 64 WREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEA 123
Query: 127 VRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNS 186
R+ G D + + L K P+GV I P+N+P + K+ AL AG +
Sbjct: 124 RRVYG-------DIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCT 176
Query: 187 IVLKPPTQGAVAALHMVHCFHLAGFPKGL---ISCVTGKGSEIGDFLTMHPSINCISFTG 243
+V+KP +AL + AG P G+ I C E+G+ + P ++ ISFTG
Sbjct: 177 VVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTG 236
Query: 244 GDT--GISISKKAGMIP-LQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVK 300
T I + A + + MELGG + F +GQ
Sbjct: 237 STTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSN 296
Query: 301 VALVMESVADXXXXXXXXXXXXXXX--GAPEDDCDITPVVTESSANFIEGLVMDAKQKAA 358
LV + D E+ P++ E + +E V DA K A
Sbjct: 297 QFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGA 356
Query: 359 TFCQEYKRE---GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNF 415
T KR N P LL NV DM EE FGP+ PVI+ ++ EE I NA++
Sbjct: 357 TVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADV 416
Query: 416 GLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINM 475
GL G +++D + +++ +E G V +N + PF G+K SG+G +G I+
Sbjct: 417 GLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVE-CPFGGVKQSGLGREGSKYGIDE 475
Query: 476 MTKIK 480
++K
Sbjct: 476 YLELK 480
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/468 (26%), Positives = 188/468 (40%), Gaps = 32/468 (6%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
+ G W+ S+ G + + NP T +V + +E+V VE + A + P+ R
Sbjct: 15 YIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWPIETRR 74
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
+ L LKE + I L E KP K+A EV + YCA+ +
Sbjct: 75 KWLEDIRDGLKENREEIGRILCXEHGKPWKEAQGEVDYAAGFFDYCAKH---------IS 125
Query: 137 VSDSFPGNERTKYCLTS--KIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQ 194
DS E+ K C + P+GV I P+N+P+ K++ AL AG V+KP ++
Sbjct: 126 ALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASE 185
Query: 195 GAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG---------D 245
+ + P G ++ V GK S IG L H + +SFTG D
Sbjct: 186 TPLTXIAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVD 245
Query: 246 TGISISKKAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVM 305
T + K L +ELGG + F GQ C V
Sbjct: 246 TAEQVKK------LALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVH 299
Query: 306 ESVADXXXXXXXXXXXXXXXG-APEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY 364
E VAD G D DI P++ + + ++ + DA K A+
Sbjct: 300 EKVADAFGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGK 359
Query: 365 K----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC 420
+ +G P ++ V + EE FGP++P + EE I N + FGL
Sbjct: 360 QPAELGDGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASY 419
Query: 421 VFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQG 468
VFT D +A ++ + G V N+ P+ PF G K SGIG +G
Sbjct: 420 VFTADAERAQRVAAGLRFGHVGWNTGTGPTPEA-PFGGXKASGIGREG 466
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 207/491 (42%), Gaps = 32/491 (6%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
F DG +SG+ I NP T + V + ++ VE+AK AQ WA T +RA
Sbjct: 30 FIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRA 89
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
+ K +L + +AE L +E K DA ++VR ++ + ++G L
Sbjct: 90 RVFXKFVQLLNDNXNELAEXLSREHGKTIDDAKGDIVRGLEVCEF-------VIGIPHLQ 142
Query: 137 VSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGA 196
S+ G + + P+G+ I PFN+P + APA+ GN+ +LKP +
Sbjct: 143 KSEFTEGAGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDP 202
Query: 197 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG--------DTGI 248
+ + AG P G+++ V G + LT HP I +SF G T
Sbjct: 203 SVPIRLAELXIEAGLPAGILNVVNGDKGAVDAILT-HPDIAAVSFVGSTPIARYVYGTAA 261
Query: 249 SISKKAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVAL-VMES 307
K+A Q G K + G+ +G+RC A+ VA+ V E
Sbjct: 262 XNGKRA-----QCFGGAKNHXIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEE 316
Query: 308 VADXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATFC---QE 363
A+ G D+ D PVVT+ + I L+ ++ A ++
Sbjct: 317 TANRLIDKLVPXVESLRIGPYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRD 376
Query: 364 YKRE----GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQG 419
+K + G+ I L D+V PD I E FGPVL V+R + EE + +G
Sbjct: 377 FKLQGYENGHFIGGCLFDDVTPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGV 436
Query: 420 CVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG--SQGITNSINMMT 477
++TRD + A + + G V +N + F G K S G +Q T+SI T
Sbjct: 437 AIYTRDGDAARDFASRINIGXVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWT 496
Query: 478 KIKSTVINLPT 488
+ K+ P+
Sbjct: 497 RTKTITSRWPS 507
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 185/439 (42%), Gaps = 24/439 (5%)
Query: 67 WAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEG 126
W + +R+ L K A ++ ++ +A E+ KP A E+ DL SY A +
Sbjct: 79 WPRXSGAERSRLXFKVADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQA 138
Query: 127 VRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNS 186
+ G+ + D + L + P+GVV I P+N+P +A ++ A+ +G +
Sbjct: 139 RALEGQTHNNIGDD-------RLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCT 191
Query: 187 IVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDT 246
+VLKP + ++ + AG P G+ + VTG G G L P+++ ++FTG
Sbjct: 192 VVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTG--- 248
Query: 247 GISISKKAGMIPLQ------MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVK 300
+ + K G I + +ELGGK G + +GQ C +
Sbjct: 249 SVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGS 308
Query: 301 VALVMESVADXXXXXXXXXXXXXXXGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAAT 359
LV E + D G P ++ I ++E+ A + V A
Sbjct: 309 RLLVQEGIRDALXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAE 368
Query: 360 FC---QEYKREGNLIW-PLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNF 415
+ RE L + P + V PD IA EE FGPVL + + +E + NA+ F
Sbjct: 369 LLLGGERIGREAGLYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVALANATEF 428
Query: 416 GLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINM 475
GL V++ ++ A+ + G INS P+ P G K SG+G + +
Sbjct: 429 GLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPE-LPIGGYKKSGLGRELGRYGFDE 487
Query: 476 MTKIKSTVINL--PTPSYT 492
++ K + L P P +T
Sbjct: 488 YSQFKGVHVTLGRPAPWFT 506
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 201/484 (41%), Gaps = 29/484 (5%)
Query: 18 YDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAE 77
Y+G W G+ +T P +P RV+ + + + V+ A+ A K WA P KR E
Sbjct: 28 YNGSW--GGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGE 85
Query: 78 LLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLV 137
++ + L+E+ + + E+ K + V EV D+ Y +G +++
Sbjct: 86 IVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYA-------VGLSRMIG 138
Query: 138 SDSFPGNERTKYCLTSKI-PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK-PPTQG 195
P +ER+ + L + P+G+V I FN+PV + A A+I GN + K PT
Sbjct: 139 GPILP-SERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTS 197
Query: 196 --AVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISISKK 253
+VA ++ G I +T G++IG + +N +SFTG + K+
Sbjct: 198 LISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTG---STQVGKQ 254
Query: 254 AGMIPLQ------MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMES 307
G++ + +ELGG + +GQRCT + + ES
Sbjct: 255 VGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHES 314
Query: 308 VADXXXXXXXXXXXXXXXGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK- 365
+ D G P D + P+ T+ + + G V +AK++ T K
Sbjct: 315 IHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKV 374
Query: 366 --REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 423
R GN + P ++ + D IA E F P+L V + + EE N GL +FT
Sbjct: 375 MDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFT 434
Query: 424 RDINKAI--LISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
+D+ + L + G V +N S F G K +G G + +++ + +
Sbjct: 435 KDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRST 494
Query: 482 TVIN 485
IN
Sbjct: 495 CTIN 498
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 176/461 (38%), Gaps = 21/461 (4%)
Query: 34 INPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPI 93
+NP T + +E+ + A K W T + +RA+ L L+
Sbjct: 12 VNPATGQTLAAXPWANAQEIEHALSLAASGFKKWKXTSVAQRAQTLRDIGQALRAHAEEX 71
Query: 94 AECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTS 153
A+C+ +E KP K A EV +S L + AE G L LV + + +
Sbjct: 72 AQCITREXGKPIKQARAEVTKSAALCDWYAEHGPAXLNPEPTLVEN--------QQAVIE 123
Query: 154 KIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPK 213
PLGV+LAI P+N+P+ + P L+AGNS +LK A + AG P
Sbjct: 124 YRPLGVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPA 183
Query: 214 GLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISISKKAGMIPLQ---MELGGKXXXX 270
G+ V + + P I ++ TG + L+ +ELGG
Sbjct: 184 GVYGWVNANNEGVSQXIN-DPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFI 242
Query: 271 XXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXXXXXXXXXXXXGAP-E 329
V G + +GQ C A K +V E +A G P
Sbjct: 243 VLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLV 302
Query: 330 DDCDITPVVTESSANFIEGLVMDAKQKAATFC---QEYKREGNLIWPLLLDNVRPDMRIA 386
++ D+ P + + V + + A ++ EGN +L +V PD
Sbjct: 303 EENDLGPXARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDXTAF 362
Query: 387 WEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSA 446
+E FGPV + + N S FGL +FT D A + +E G V IN
Sbjct: 363 RQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEXAARLECGGVFINGY 422
Query: 447 PSRGPDHFPFQGLKDSGIGSQ----GITNSINMMTKIKSTV 483
S F G+K SG G + G+ N+ T K+ V
Sbjct: 423 -SASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNRV 462
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 196/477 (41%), Gaps = 48/477 (10%)
Query: 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92
I+NP T + + +++ V+ A+ A W++T +R+ L K A ++++
Sbjct: 44 ILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADE 103
Query: 93 IAECLVKEIAKP----AKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTK 148
A KP D + ++ + A + G+ L PG+
Sbjct: 104 FAALEALNCGKPINAVKNDELPAIIDCWRFFA-GAVRNLHAPAAGEYL-----PGHT--- 154
Query: 149 YCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHL 208
+ P+G+V +I P+NYP+ K+APA+ GN++V KP Q + AL +
Sbjct: 155 -SXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIAD 213
Query: 209 AGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMI--PLQMELGG 265
P+G+++ +TG+G +G+ L HP + +S TG TG + A +ELGG
Sbjct: 214 I-LPEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAAAAKTVKRTHLELGG 272
Query: 266 KXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAV-----KVALVMESVADXXXXXXXXXX 320
K G+ +GQ CTA + + + VAD
Sbjct: 273 KAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRY 332
Query: 321 XXXXXGAPEDDCD--ITPVVTESS----ANFIEGLVMDAKQKAATFCQEYKREGNLIWPL 374
+DD + I P+++ A+F+E + T + EG P
Sbjct: 333 NL------DDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPT 386
Query: 375 LLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISD 434
++ + I E FGPV+ V R ++ + N S++GL V+T+DI+KA +
Sbjct: 387 VVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAXRAAS 446
Query: 435 AMETGTVQINSAPSRGPDHF------PFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485
++ G IN+ HF P G+K SG G ++ T ++ IN
Sbjct: 447 RLQYGCTWINT-------HFXLTNEXPHGGIKQSGYGKDXSVYALEDYTAVRHIXIN 496
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 195/486 (40%), Gaps = 33/486 (6%)
Query: 18 YDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAE 77
Y+G W SG+ +T P +P RV T E + V+ + A K WA P KR E
Sbjct: 26 YNGSW--GGSGEVITSYCPANNEPIARVTQATLAEYEETVQKTREAWKMWADIPAPKRGE 83
Query: 78 LLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLV 137
++ + L+++ + + E+ K + V EV D+ Y +G +++
Sbjct: 84 IVRQIGDALRKKIKVLGSLVSLEMGKIYVEGVGEVQEYVDVCDYA-------VGLSRMIG 136
Query: 138 SDSFPGNERTKYCLTSKI-PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK-----P 191
P +ER + L + P+G+V I FN+PV + A AL GN + K P
Sbjct: 137 GPVLP-SERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTP 195
Query: 192 PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISIS 251
T AV + + P G I +T G++IG + ++ +SFTG +
Sbjct: 196 LTSVAVTKI-VAEVLEQNNLP-GAICSMTCGGADIGTAMAKDERVDLLSFTG---STHVG 250
Query: 252 KKAGMIPLQ------MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVM 305
K M+ + +ELGG V +GQRCT + ++
Sbjct: 251 KMVAMMVQERFGRKLLELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLH 310
Query: 306 ESVADXXXXXXXXXXXXXXXGAPEDDCDIT-PVVTESSANFIEGLVMDAKQKAATFC--- 361
ESV D G P D + P+ T+ + + + AKQ+ T
Sbjct: 311 ESVHDAVVERIAKAYKQVRIGDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGG 370
Query: 362 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
+ R GN + P ++ + D I E F P+L V++ + EE N GL +
Sbjct: 371 KVMDRPGNYVEPTIITGLAHDAPIVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSI 430
Query: 422 FTRDINKAI--LISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKI 479
FT+D+ + L + G V +N S F G K +G G + ++S +
Sbjct: 431 FTKDLGRVFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQYMRR 490
Query: 480 KSTVIN 485
+ IN
Sbjct: 491 STCTIN 496
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 178/442 (40%), Gaps = 19/442 (4%)
Query: 34 INPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPI 93
+NP T + T +++++ + A K W RAE+LH A LKE + +
Sbjct: 9 VNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDEL 68
Query: 94 AECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTS 153
A+ E K ++ EV + +Y A+ G L KL +S GN Y L
Sbjct: 69 AKXXTLEXGKLLSESKEEVELCVSICNYYADHGPEXLKPTKL---NSDLGN---AYYL-- 120
Query: 154 KIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPK 213
K GV+ A P+N+P+ + AP I GN I+LK +A AG P+
Sbjct: 121 KQSTGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPE 180
Query: 214 GLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISISKKAGMIPLQ---MELGGKXXXX 270
G + + ++ D + P I ++ TG + G S +A L+ ELGG
Sbjct: 181 GSLINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAGKNLKKSTXELGGNDAFI 239
Query: 271 XXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXXXXXXXXXXXXGAP-E 329
GQ CT+ K +V +S D G P E
Sbjct: 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299
Query: 330 DDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY---KREGNLIWPLLLDNVRPDMRIA 386
D + P +E + +E V +A A +Y +G P +L ++ D +
Sbjct: 300 ADTTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVF 359
Query: 387 WEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSA 446
+E FGP+ V + I N S++GL V DI++A +S +ETG IN
Sbjct: 360 DKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGXTVINGR 419
Query: 447 -PSRGPDHFPFQGLKDSGIGSQ 467
+ G PF G+K SG G +
Sbjct: 420 WITSG--ELPFGGIKKSGYGRE 439
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 187/464 (40%), Gaps = 35/464 (7%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
+ G W + G+++ ++P + + + +V+ V A+ A +WA+ PL +R
Sbjct: 9 YIAGQW-LAGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRI 67
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
ELL + AA LK + +A + +E KP ++ TEV + V+ + GE
Sbjct: 68 ELLERFAATLKSRADELARVIGEETGKPLWESATEVTSXVNKVAISVQAFRERTGEKSGP 127
Query: 137 VSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGA 196
++D+ + P GVV P+N+P +L I PAL+AGN +V KP
Sbjct: 128 LADA--------TAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTP 179
Query: 197 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISKKAG 255
A + + AG P G+++ V G G E G L H ++ + FTG TG + + G
Sbjct: 180 KVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFG 238
Query: 256 MIP---LQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESV-ADX 311
P L +E GG ++ F +GQRCT + LV + D
Sbjct: 239 GQPQKILALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDA 298
Query: 312 XXXXXXXXXXXXXXG------APEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK 365
G AP I+ E E L+ Q Q
Sbjct: 299 LLARLVAVSATLRVGRFDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXTQPID 358
Query: 366 REGNLIWPLLLD----NVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
L+ P +LD RPD EE FGP+L VIR + I NA+ +GL +
Sbjct: 359 GAA-LLTPGILDVSAVAERPD-----EEFFGPLLQVIRYSDFAAAIREANATQYGLAAGL 412
Query: 422 F--TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSG 463
+R+ + L+ G V N + PF G+ SG
Sbjct: 413 LSDSRERFEQFLVES--RAGIVNWNKQLTGAASSAPFGGIGASG 454
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 186/456 (40%), Gaps = 26/456 (5%)
Query: 29 KSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKE 88
K++ + NP T K + + + + A+ AQ W + + R L + +
Sbjct: 6 KTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILS 65
Query: 89 QKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTK 148
++ + E LV + + + + ++ S+ A R G L+ S
Sbjct: 66 RREQLTEALVNDTGRLSITVL-------EIDSFLASID-RWCGLAPELLQTSAKNTSIPF 117
Query: 149 YCLT-SKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFH 207
L S +P +V I P+N+P+ L+ PAL+AG ++V+KP ++ +
Sbjct: 118 IALQQSLVPYPLVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIAPRFVAPLLXALN 177
Query: 208 LAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELG 264
+ ++ V G G E G L + ++ + FTG TG +++ A IP +ELG
Sbjct: 178 TVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAARRFIPAYLELG 234
Query: 265 GKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXXXXXXXXXXX 324
GK + G +GQ C +++ V ES +
Sbjct: 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQ 294
Query: 325 XGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKRE--GNLIW--PLLLDNV 379
P +D I P++ E A I ++DA +K A K E G W P + NV
Sbjct: 295 LAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVXTNV 354
Query: 380 RPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETG 439
++ EE FGP+ PV VEE ++ N + +GL VF ++A+ ++ + G
Sbjct: 355 NHSXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAG 414
Query: 440 TVQINSAPSRGPDH------FPFQGLKDSGIGSQGI 469
+ IN A H F F GL S +G+ G+
Sbjct: 415 AISINDAALTAXXHEGEKNAFNFSGLGGSRVGAAGL 450
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 183/447 (40%), Gaps = 31/447 (6%)
Query: 52 EVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTE 111
++++ V+ A+ A S PL R + L +++EQ+ + L ++ K +A E
Sbjct: 19 KISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYE 78
Query: 112 VVRSGDLVSYCAEEGVRILGEGKLLVSDS----FPGNERTKYCLTSKIPLGVVLAIPPFN 167
V Y EE ++ + +D P ++ + + S+ PLGVVL I +N
Sbjct: 79 EV------VYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSE-PLGVVLVIGTWN 131
Query: 168 YPVNLAVSKIAPALIAGNSIVLKPP--TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSE 225
YP NL + + A+ AGN++VLKP ++ + L + +L K L + G E
Sbjct: 132 YPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLD---KDLYPVINGGVPE 188
Query: 226 IGDFLTMHPSINCISFTGGDTG----ISISKKAGMIPLQMELGGKXXXXXXXXXXXXXXX 281
+ L + I +T G TG I + + P+ +ELGGK
Sbjct: 189 TTELLK--ERFDHILYT-GSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVAC 245
Query: 282 XXXVKGGFSYSGQRCTAVKVALVMESVADXXXXXXXXXXXXXXXGAPEDDCDITPVVTES 341
G F SGQ C A L S+ + + D +++
Sbjct: 246 RRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISAR 305
Query: 342 SANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN 401
+ GL+ K R I P +L +V P + EE FGPVLP++ +
Sbjct: 306 HFQRVMGLIEGQKVAYGGTGDAATR---YIAPTILTDVDPQSPVMQEEIFGPVLPIVCVR 362
Query: 402 SVEEGIHHCNASNFGLQGCVFTRDINKAI--LISDAMETGTVQINSAPSRGPDH-FPFQG 458
S+EE I N L +F+ + +K I +I++ +G V N H PF G
Sbjct: 363 SLEEAIQFINQREKPLALYMFSSN-DKVIKKMIAET-SSGGVAANDVIVHITLHSLPFGG 420
Query: 459 LKDSGIGSQGITNSINMMTKIKSTVIN 485
+ +SG+GS S + +S ++
Sbjct: 421 VGNSGMGSYHGKKSFETFSHRRSCLVR 447
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 161/403 (39%), Gaps = 48/403 (11%)
Query: 53 VNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAK------ 106
+NK +E A A+K W P+ RA++ KAA +L + AE L K + K
Sbjct: 105 LNKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRR--AEILAKTMVGQGKTVIQAE 162
Query: 107 -DAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPP 165
DA E++ D + A+ V + G+ + V P T Y + G V AI P
Sbjct: 163 IDAAAELI---DFFRFNAKYAVELEGQQPISVP---PSTNSTVY----RGLEGFVAAISP 212
Query: 166 FNYPV---NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGK 222
FN+ NLA APAL+ GN ++ KP +A+ + AG P +I V
Sbjct: 213 FNFTAIGGNLAG---APALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPAD 268
Query: 223 GSEIGDFLTMHPSINCISFTGG---------DTGISISKKAGMIPLQMELGGKXXXXXXX 273
G GD +T + I+FTG ++ + L E GGK
Sbjct: 269 GPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHR 328
Query: 274 XXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXXXXXXXXXXXXGAPEDDCD 333
++ F Y GQ+C+A V S+ G P +D
Sbjct: 329 SADVESVVSGTLRSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFG 388
Query: 334 --ITPVVTESSANFIEGLVMDAKQK------AATFCQEYKREGNLIWPLLLDNVRPDMRI 385
+ V+ S I+ + A+ A C + G + P ++++ P I
Sbjct: 389 TFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDD--SVGYFVEPCIVESKDPQEPI 446
Query: 386 AWEEPFGPVLPVIRI--NSVEEGIHHCNA-SNFGLQGCVFTRD 425
EE FGPVL V + +E + ++ +++GL G VF++D
Sbjct: 447 MKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQD 489
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 161/403 (39%), Gaps = 48/403 (11%)
Query: 53 VNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAK------ 106
+NK +E A A+K W P+ RA++ KAA +L + AE L K + K
Sbjct: 105 LNKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRR--AEILAKTMVGQGKTVIQAE 162
Query: 107 -DAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPP 165
DA E++ D + A+ V + G+ + V P T Y + G V AI P
Sbjct: 163 IDAAAELI---DFFRFNAKYAVELEGQQPISVP---PSTNSTVY----RGLEGFVAAISP 212
Query: 166 FNYPV---NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGK 222
FN+ NLA APAL+ GN ++ KP +A+ + AG P +I V
Sbjct: 213 FNFTAIGGNLAG---APALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPAD 268
Query: 223 GSEIGDFLTMHPSINCISFTGG---------DTGISISKKAGMIPLQMELGGKXXXXXXX 273
G GD +T + I+FTG ++ + L E GGK
Sbjct: 269 GPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHR 328
Query: 274 XXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXXXXXXXXXXXXGAPEDDCD 333
++ F Y GQ+C+A V S+ G P +D
Sbjct: 329 SADVESVVSGTLRSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFG 388
Query: 334 --ITPVVTESSANFIEGLVMDAKQK------AATFCQEYKREGNLIWPLLLDNVRPDMRI 385
+ V+ S I+ + A+ A C + G + P ++++ P I
Sbjct: 389 TFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDD--SVGYFVEPCIVESKDPQEPI 446
Query: 386 AWEEPFGPVLPVIRI--NSVEEGIHHCNA-SNFGLQGCVFTRD 425
EE FGPVL V + +E + ++ +++GL G VF++D
Sbjct: 447 MKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQD 489
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 161/403 (39%), Gaps = 48/403 (11%)
Query: 53 VNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAK------ 106
+NK +E A A+K W P+ RA++ KAA +L + AE L K + K
Sbjct: 105 LNKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRR--AEILAKTMVGQGKTVIQAE 162
Query: 107 -DAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPP 165
DA E++ D + A+ V + G+ + V P T Y + G V AI P
Sbjct: 163 IDAAAELI---DFFRFNAKYAVELEGQQPISVP---PSTNSTVY----RGLEGFVAAISP 212
Query: 166 FNYPV---NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGK 222
FN+ NLA APAL+ GN ++ KP +A+ + AG P +I V
Sbjct: 213 FNFTAIGGNLAG---APALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPAD 268
Query: 223 GSEIGDFLTMHPSINCISFTGG---------DTGISISKKAGMIPLQMELGGKXXXXXXX 273
G GD +T + I+FTG ++ + L E GGK
Sbjct: 269 GPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHR 328
Query: 274 XXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXXXXXXXXXXXXGAPEDDCD 333
++ F Y GQ+C+A V S+ G P +D
Sbjct: 329 SADVESVVSGTLRSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFG 388
Query: 334 --ITPVVTESSANFIEGLVMDAKQK------AATFCQEYKREGNLIWPLLLDNVRPDMRI 385
+ V+ S I+ + A+ A C + G + P ++++ P I
Sbjct: 389 TFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDD--SVGYFVEPCIVESKDPQEPI 446
Query: 386 AWEEPFGPVLPVIRI--NSVEEGIHHCNA-SNFGLQGCVFTRD 425
EE FGPVL V + +E + ++ +++GL G VF++D
Sbjct: 447 MKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQD 489
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 164/409 (40%), Gaps = 50/409 (12%)
Query: 53 VNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAK------ 106
+N+ ++ A A+K W P+ RA++ KAA +L + AE L K + K
Sbjct: 102 LNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRR--AEVLAKTMVGQGKTVIQAE 159
Query: 107 -DAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPP 165
DA E++ D + A+ V + GE + V P T Y + G V AI P
Sbjct: 160 IDAAAELI---DFFRFNAKFAVELEGEQPISVP---PSTNHTVY----RGLEGFVAAISP 209
Query: 166 FNYPV---NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGK 222
FN+ NLA APAL+ GN ++ KP +A+ + AG P +I V
Sbjct: 210 FNFTAIGGNLAG---APALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPAD 265
Query: 223 GSEIGDFLTMHPSINCISFTGG---------DTGISISKKAGMIPLQMELGGKXXXXXXX 273
G GD +T + I+FTG ++ + L E GGK
Sbjct: 266 GPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHS 325
Query: 274 XXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXXXXXXXXXXXXGAPEDDCD 333
++ F Y GQ+C+A V +S+ G P +D
Sbjct: 326 SADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFG 385
Query: 334 --ITPVVTESSANFIEGLVMDAKQK------AATFCQEYKREGNLIWPLLLDNVRPDMRI 385
+ V+ + I+ + A+ A C E G + P ++++ P I
Sbjct: 386 TFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNE--SVGYYVEPCIIESKDPQEPI 443
Query: 386 AWEEPFGPVLPVIRI--NSVEEGIHHCNA-SNFGLQGCVFTRDINKAIL 431
EE FGPVL V + E + ++ +++GL G VF +D KAI+
Sbjct: 444 MKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQD--KAIV 490
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 139/344 (40%), Gaps = 21/344 (6%)
Query: 150 CLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP----PTQGAVAALHMVHC 205
C + P GV I PFNYPVNL ++ + A+I GN+ ++KP P AV +
Sbjct: 124 CYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAV-----IEK 178
Query: 206 FHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQME 262
F ++ + G E L++ + I FTG + G + + A + P+ +E
Sbjct: 179 IIAEAFAPEYVAVIQGGRDENSHLLSL--PFDFIFFTGSPNVGKVVMQAAAKHLTPVVLE 236
Query: 263 LGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXXXXXXXXX 322
LGGK + G F SGQ C A V SV D
Sbjct: 237 LGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHYSVKDALLERLVERVKT 296
Query: 323 XXXGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPD 382
PE + +VTE + L ++A Q + + ++D V +
Sbjct: 297 EL---PEINS-TGKLVTERQVQRLVSL-LEATQGQVLVGSQADVSKRALSATVVDGVEWN 351
Query: 383 MRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFG-LQGCVFTRDINKAILISDAMETGTV 441
+ EE FGP+LPV+ +SV I N + L VF +D++ A I + +++G
Sbjct: 352 DPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDA 411
Query: 442 QINSAPSRG-PDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
Q+N + PF G+ SG+G S T KS I
Sbjct: 412 QVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI 455
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 136/341 (39%), Gaps = 26/341 (7%)
Query: 156 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP-TQGAVAALHMVHCFHLAGFPKG 214
PLGVVL I +NYP NL + + A+ AGN+++LKP G +A L + +
Sbjct: 103 PLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADL--LATLIPQYMDQN 160
Query: 215 LISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISISKKAG---MIPLQMELGGKXXXXX 271
L V G E + L + I +TG I A + P+ +ELGGK
Sbjct: 161 LYLVVKGGVPETTELLK--ERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYV 218
Query: 272 XXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXXXXXXXXXXXXGAPEDD 331
G F SGQ C A L S+ + +
Sbjct: 219 DKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQS 278
Query: 332 CDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPF 391
D ++ + ++GL+ + K + + I P +L +V P + EE F
Sbjct: 279 RDYGRIINDRHFQRVKGLIDNQK---VAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIF 335
Query: 392 GPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMET--GTVQIN----- 444
GPV+P++ + S+EE I N L VF+ N+ ++ ET G V N
Sbjct: 336 GPVMPIVCVRSLEEAIQFINQREKPLALYVFSN--NEKVIKKMIAETSSGGVTANDVIVH 393
Query: 445 -SAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
+ P+ PF G+ +SG+G+ S + +S ++
Sbjct: 394 ITVPT-----LPFGGVGNSGMGAYHGKKSFETFSHRRSCLV 429
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 138/344 (40%), Gaps = 21/344 (6%)
Query: 150 CLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP----PTQGAVAALHMVHC 205
C + P GV I PFNYPVNL ++ + A+I GN+ ++KP P AV +
Sbjct: 124 CYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAV-----IEK 178
Query: 206 FHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQME 262
F ++ + G E L++ + I FTG + G + + A + P+ +E
Sbjct: 179 IIAEAFAPEYVAVIQGGRDENSHLLSL--PFDFIFFTGSPNVGKVVMQAAAKHLTPVVLE 236
Query: 263 LGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXXXXXXXXX 322
LGGK + G F SGQ A V SV D
Sbjct: 237 LGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKT 296
Query: 323 XXXGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPD 382
PE + +VTE + L ++A Q + + ++D V +
Sbjct: 297 EL---PEINS-TGKLVTERQVQRLVSL-LEATQGQVLVGSQADVSKRALSATVVDGVEWN 351
Query: 383 MRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFG-LQGCVFTRDINKAILISDAMETGTV 441
+ EE FGP+LPV+ +SV I N + L VF +D++ A I + +++G
Sbjct: 352 DPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDA 411
Query: 442 QINSAPSRG-PDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
Q+N + PF G+ SG+G S T KS I
Sbjct: 412 QVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI 455
>pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|B Chain B, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|C Chain C, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|D Chain D, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
Length = 464
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 145 ERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVH 204
+ K + +PLGVV + P P + + K ++ AGNSIV P A L V
Sbjct: 97 DNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVR 156
Query: 205 CF----HLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISISKKAG 255
AG PKG ISC+T + D L H I TGG + + +G
Sbjct: 157 IISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAYSSG 211
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 72/186 (38%), Gaps = 14/186 (7%)
Query: 158 GVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG-FPKGLI 216
GV L I FN+P +K APAL++G +++KP T A MV AG P G +
Sbjct: 153 GVALFINAFNFPSWGLWAKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 212
Query: 217 SCVTGKGSEIGDFLTMHPSINCISFTG-GDTGISISKKAGMIPLQMELGGKXXXXXXXXX 275
S + G + + D + S + +SFTG DT ++ + L +
Sbjct: 213 SIICGSSAGLLDQIR---SFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSAIL 269
Query: 276 XXXXX---------XXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXXXXXXXXXXXXG 326
V+ SGQ+CTA++ A V E+ + G
Sbjct: 270 CADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVG 329
Query: 327 APEDDC 332
P +D
Sbjct: 330 NPRNDA 335
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 14/186 (7%)
Query: 158 GVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG-FPKGLI 216
GV L I FN+P K APAL++G +++KP T A MV AG P G +
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 212
Query: 217 SCVTGKGSEIGDFLTMHPSINCISFTG-GDTGISISKKAGMIPLQMELGGKXXXXXXXXX 275
S + G + + D + S + +SFTG DT ++ + L +
Sbjct: 213 SIICGSSAGLLDQIR---SFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAIL 269
Query: 276 XXXXX---------XXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXXXXXXXXXXXXG 326
V+ SGQ+CTA++ A V E+ + G
Sbjct: 270 CADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVG 329
Query: 327 APEDDC 332
P +D
Sbjct: 330 NPRNDA 335
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 14/186 (7%)
Query: 158 GVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG-FPKGLI 216
GV L I FN+P K APAL++G +++KP T A MV AG P G +
Sbjct: 151 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 210
Query: 217 SCVTGKGSEIGDFLTMHPSINCISFTG-GDTGISISKKAGMIPLQMELGGKXXXXXXXXX 275
S + G + + D + S + +SFTG DT ++ + L +
Sbjct: 211 SIICGSSAGLLDQIR---SFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSAIL 267
Query: 276 XXXXX---------XXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXXXXXXXXXXXXG 326
V+ SGQ+CTA++ A V E+ + G
Sbjct: 268 CADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVG 327
Query: 327 APEDDC 332
P +D
Sbjct: 328 NPRNDA 333
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 14/186 (7%)
Query: 158 GVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG-FPKGLI 216
GV L I FN+P K APAL++G +++KP T A MV AG P G +
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 212
Query: 217 SCVTGKGSEIGDFLTMHPSINCISFTG-GDTGISISKKAGMIPLQMELGGKXXXXXXXXX 275
S + G + + D + S + +SFTG DT ++ + L +
Sbjct: 213 SIICGSSAGLLDQIR---SFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSAIL 269
Query: 276 XXXXX---------XXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXXXXXXXXXXXXG 326
V+ SGQ+CTA++ A V E+ + G
Sbjct: 270 CADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVG 329
Query: 327 APEDDC 332
P +D
Sbjct: 330 NPRNDA 335
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 84/207 (40%), Gaps = 17/207 (8%)
Query: 49 TQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA 108
T E VN+ E A+ A ++ + +RA L A ++ + I E +E P
Sbjct: 61 TVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARL 120
Query: 109 VTEVVRSGDLVSYCAEEGVRILGEGKLL---VSDSFPGNE---RTKYCLTSKIPLGVVLA 162
E R+ + A+ + +G L V + P + R + L + P+G V
Sbjct: 121 NGERGRTTGQLRLFADH----IEKGDYLDRRVDAAXPERQPAPRQEIRLVQR-PVGPVAV 175
Query: 163 IPPFNYPVNLAVS--KIAPALIAGNSIVLK----PPTQGAVAALHMVHCFHLAGFPKGLI 216
N+P+ + + A AL AG +V+K P G + A + G G+
Sbjct: 176 FGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVF 235
Query: 217 SCVTGKGSEIGDFLTMHPSINCISFTG 243
S + G ++G L HP I + FTG
Sbjct: 236 SLIQGGSRDVGHALVQHPHIKAVGFTG 262
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 158 GVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG-FPKGLI 216
GV L I FN+P K APAL++G +++KP T A MV AG P G +
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 212
Query: 217 SCVTGKGSEIGDFLTMHPSINCISFTG-GDTGISI 250
S + G + + D + S + +SFTG DT ++
Sbjct: 213 SIICGSSAGLLDQIR---SFDVVSFTGSADTAATL 244
>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi
Length = 510
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 81/209 (38%), Gaps = 13/209 (6%)
Query: 49 TQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA 108
T+ EVN+ A + + + KRA LL A+ L+ + I E A P
Sbjct: 28 TEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRL 87
Query: 109 VTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKY----CLTSKIPLGVVLAIP 164
E+ R+ + + A+ V G + D+ P R +I LG V
Sbjct: 88 TGEIARTANQLRLFAD--VVNSGSYHQAILDT-PNPTRAPLPKPDIRRQQIALGPVAVFG 144
Query: 165 PFNYPVNLAVS--KIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLA----GFPKGLISC 218
N+P+ + + A AL AG +++K T + + C A P+ + +
Sbjct: 145 ASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTL 204
Query: 219 VTGKGSEIGDFLTMHPSINCISFTGGDTG 247
+ G +G L HP I + FTG G
Sbjct: 205 LQGNQRALGQALVSHPEIKAVGFTGSVGG 233
>pdb|4GHK|A Chain A, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|B Chain B, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|C Chain C, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|D Chain D, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
Length = 444
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 11/99 (11%)
Query: 375 LLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISD 434
L+D D R + PVL + ++ ++ I H N + T D ++A+
Sbjct: 328 LVDATDEDWRTEY---LAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLR 384
Query: 435 AMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQ-GITNS 472
+++ +V +N A +R D F F G+G++ GI+N
Sbjct: 385 EVDSASVMVN-ASTRFADGFEF------GLGAEIGISND 416
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 156 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAV----AALHMVHCFHLAGF 211
P+G++ I P P + A+ K +L N I+ P + AA ++ AG
Sbjct: 103 PVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGA 162
Query: 212 PKGLISCVTGKGSEIGDFLTMHPSINCISFTGG 244
PK +I + E+ + L H I I TGG
Sbjct: 163 PKDIIGWIDQPSVELSNALXKHDDIALILATGG 195
>pdb|1DQU|A Chain A, Crystal Structure Of The Isocitrate Lyase From Aspergillus
Nidulans
Length = 538
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 36 PTTRKPHFRVQACTQEEVNKVVETAKLAQKSW--AKTPLWKRA-ELLHKAAAILKEQKAP 92
P TR+ ++R Q TQ +N+ V A A W +K P +K+A E A+ EQK
Sbjct: 362 PRTREGYYRYQGGTQCAINRAVAYAPFADLIWMESKLPDYKQAKEFADGVHAVWPEQKLA 421
Query: 93 --IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILG-EGKLLVSDSF 141
++ + A P + T + R G L A + + + G L+SD+F
Sbjct: 422 YNLSPSFNWKKAMPRDEQETYIKRLGALG--YAWQFITLAGLHTTALISDTF 471
>pdb|3NBV|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With Amp-Pnp
And Fructose
pdb|3NBV|B Chain B, X-Ray Structure Of Ketohexokinase In Complex With Amp-Pnp
And Fructose
pdb|3NBW|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With A
Pyrazole Compound
pdb|3NBW|B Chain B, X-Ray Structure Of Ketohexokinase In Complex With A
Pyrazole Compound
pdb|3NC2|A Chain A, X-Ray Structure Of Ketohexokinase With A Quinazoline
pdb|3NC2|B Chain B, X-Ray Structure Of Ketohexokinase With A Quinazoline
pdb|3NC9|A Chain A, X-Ray Structure Of Ketohexokinase Complexed With An
Indazole Compound
pdb|3NC9|B Chain B, X-Ray Structure Of Ketohexokinase Complexed With An
Indazole Compound
pdb|3NCA|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With A Thieno
Pyridinol Compound
pdb|3NCA|B Chain B, X-Ray Structure Of Ketohexokinase In Complex With A Thieno
Pyridinol Compound
pdb|3RO4|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With An
Indazole Compound Derivative
pdb|3RO4|B Chain B, X-Ray Structure Of Ketohexokinase In Complex With An
Indazole Compound Derivative
pdb|3Q92|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With A
Pyrimidopyrimidine Analog 1
pdb|3Q92|B Chain B, X-Ray Structure Of Ketohexokinase In Complex With A
Pyrimidopyrimidine Analog 1
pdb|3QA2|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With A
Pyrimidopyrimidine Analog 2
pdb|3QA2|B Chain B, X-Ray Structure Of Ketohexokinase In Complex With A
Pyrimidopyrimidine Analog 2
pdb|3QAI|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With A
Pyrimidopyrimidine Analog 3
pdb|3QAI|B Chain B, X-Ray Structure Of Ketohexokinase In Complex With A
Pyrimidopyrimidine Analog 3
Length = 313
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 93 IAECLVKEIAKPAKDAVTEVVRSGD-LVSYCAEEGVRILG-EGKLLVSDSFP 142
+A+ L + A+ A + VR G LV AEEG LG +GKLL SD+FP
Sbjct: 210 VAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDAFP 261
>pdb|3B3L|A Chain A, Crystal Structures Of Alternatively-Spliced Isoforms Of
Human Ketohexokinase
pdb|3B3L|B Chain B, Crystal Structures Of Alternatively-Spliced Isoforms Of
Human Ketohexokinase
pdb|3B3L|C Chain C, Crystal Structures Of Alternatively-Spliced Isoforms Of
Human Ketohexokinase
pdb|3B3L|D Chain D, Crystal Structures Of Alternatively-Spliced Isoforms Of
Human Ketohexokinase
Length = 298
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 93 IAECLVKEIAKPAKDAVTEVVRSGD-LVSYCAEEGVRILG-EGKLLVSDSFP 142
+A+ L + A+ A + VR G LV AEEG LG +GKLL SD+FP
Sbjct: 195 VAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDAFP 246
>pdb|2HLZ|A Chain A, Crystal Structure Of Human Ketohexokinase (Casp Target)
pdb|2HLZ|B Chain B, Crystal Structure Of Human Ketohexokinase (Casp Target)
pdb|2HLZ|C Chain C, Crystal Structure Of Human Ketohexokinase (Casp Target)
pdb|2HLZ|D Chain D, Crystal Structure Of Human Ketohexokinase (Casp Target)
Length = 312
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 93 IAECLVKEIAKPAKDAVTEVVRSGD-LVSYCAEEGVRILG-EGKLLVSDSFP 142
+A+ L + A+ A + VR G LV AEEG LG +GKLL SD+FP
Sbjct: 209 VAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDAFP 260
>pdb|2HQQ|A Chain A, Crystal Structure Of Human Ketohexokinase Complexed To
Different Sugar Molecules
pdb|2HW1|A Chain A, Crystal Structure Of Human Ketohexokinase Complexed To
Different Sugar Molecules
Length = 298
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 93 IAECLVKEIAKPAKDAVTEVVRSGD-LVSYCAEEGVRILG-EGKLLVSDSFP 142
+A+ L + A+ A + VR G LV AEEG LG +GKLL SD+FP
Sbjct: 195 VAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDAFP 246
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,969,366
Number of Sequences: 62578
Number of extensions: 556076
Number of successful extensions: 1644
Number of sequences better than 100.0: 101
Number of HSP's better than 100.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1288
Number of HSP's gapped (non-prelim): 110
length of query: 494
length of database: 14,973,337
effective HSP length: 103
effective length of query: 391
effective length of database: 8,527,803
effective search space: 3334370973
effective search space used: 3334370973
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)