BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011081
(494 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225428586|ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Vitis vinifera]
Length = 492
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 295/500 (59%), Positives = 360/500 (72%), Gaps = 14/500 (2%)
Query: 1 MAVQILKHIIFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNH 60
MAV +K I+F+ P + S SS + + LI+T VS+L H RSKSRW+H
Sbjct: 1 MAVSKVKQILFT-----PLARKTLCLSLSSLPSDQNPTKTLISTAVSILRHQRSKSRWSH 55
Query: 61 LLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARL 120
L SL G TPT+ SQI L +KNNPHLAL FF + HKSLC H+L SY+TIIHIL+RARL
Sbjct: 56 LQSLFPKGFTPTEASQIVLQIKNNPHLALSFFLWCHHKSLCNHTLLSYSTIIHILARARL 115
Query: 121 IGPARDVIRVALRSPENDPKL-----KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIE 175
A +IR A+R ++ + K+FE LVKTY CGSAPFVFDLLIK CL N +
Sbjct: 116 KSQALGLIRTAIRVFDDSDECSSQPPKIFESLVKTYNSCGSAPFVFDLLIKACL---NSK 172
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG-LDSDATAGIG 234
+IE + IV+ML SRG+S +STCNALIW+VSRG+G +GYEIYREVFG D + +
Sbjct: 173 RIEQSISIVKMLRSRGISPTISTCNALIWQVSRGRGCDAGYEIYREVFGSWDDEINEKVR 232
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
V+ VRV PNVHTFNALMV FYR+G EKVE++W EM C P+ YSYSVLMA FC+
Sbjct: 233 VRVRVRVRVCPNVHTFNALMVCFYRDGGVEKVEEIWAEMGEWDCNPNAYSYSVLMAAFCD 292
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E RM E EKLWEEMR K +EHD++AYNTIIGGFC IGE+ R EE FREM LSG++S+ VT
Sbjct: 293 EGRMGEVEKLWEEMRMKKMEHDIMAYNTIIGGFCRIGEIERGEELFREMELSGIQSTCVT 352
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+EHL+NGYC GDVDSA+L+Y DMCRKGF E T++ +I LC+ RRV EAL +L+ +
Sbjct: 353 YEHLINGYCEIGDVDSAVLLYKDMCRKGFRAEARTVDGMILLLCNNRRVHEALKLLRVAM 412
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
P KSY LIKG CEEGKMEEA K+Q+EMVGKGF+P+LEIYSAFIDGYMK+GN
Sbjct: 413 GNVEFAPRGKSYETLIKGFCEEGKMEEASKLQSEMVGKGFKPTLEIYSAFIDGYMKQGNK 472
Query: 475 EMATMLRKEMFENQVRQEDG 494
E+A LRKEMFE Q++QE+
Sbjct: 473 EIAETLRKEMFETQMQQEEN 492
>gi|255556157|ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541776|gb|EEF43324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 295/502 (58%), Positives = 357/502 (71%), Gaps = 26/502 (5%)
Query: 1 MAVQILKHIIFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNH 60
MA ILK I+ S PQ LS ++S P SDQ LI T+ SLL HHRSKSRW H
Sbjct: 1 MASPILKRILL-FSPKTINPQSLS----TASPPSSDQ--QLITTITSLLIHHRSKSRWTH 53
Query: 61 LLSLCRSG---LTPTQFSQIALGLKNNPHLALRFFSFT-QHKSLCKHSLSSYATIIHILS 116
L SL + LTPT FSQI L LK+NP LALRFF FT ++ S C H L S +TI HILS
Sbjct: 54 LRSLILTSNKTLTPTHFSQIILLLKSNPRLALRFFHFTLRNPSFCSHDLRSISTITHILS 113
Query: 117 RARLIGPARDVIRVALRSP-----ENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEV 171
RARL A+ +I +A SP N LK FE+LVKTYREC SAPFVFDLLIK CLE+
Sbjct: 114 RARLKPQAQSIIHLAFTSPVLVDDSNGQALKFFEILVKTYRECDSAPFVFDLLIKSCLEL 173
Query: 172 KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA 231
K KI+ + IVR+L SRG+S +STCN L+ VS+ KG +GY ++REVF ++ +
Sbjct: 174 K---KIDDGLKIVRLLRSRGISPLISTCNFLVSWVSKCKGCYAGYGVFREVFEVNDN--- 227
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+ KRV++VRPNVHTFN LM+GFYR+G E VE+VW EM R C P+ +SYSVLM V
Sbjct: 228 ----EGKRVIKVRPNVHTFNELMMGFYRDGELEMVEEVWSEMERFECVPNGFSYSVLMTV 283
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
F + R +E EKLWEEMR K ++ DVVAYNT+IGGFC+IGE+ +AEE REM L+GVE++
Sbjct: 284 FLDVGRTKEIEKLWEEMRAKGIKGDVVAYNTVIGGFCKIGEIEKAEELSREMELNGVEAN 343
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
VTFEHL+NGYC GDVDSAILV+ M RKGF EGS ++VLIG LC+KRRV EAL+I++
Sbjct: 344 CVTFEHLINGYCSVGDVDSAILVFKHMVRKGFRAEGSVMDVLIGGLCEKRRVSEALEIMR 403
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ G + KSY LIKGLC++GKM+EALK+QAEMVG GFEP+ EIY AFIDGYMK
Sbjct: 404 IAMRNDGFRLSGKSYELLIKGLCKDGKMDEALKLQAEMVGGGFEPNFEIYGAFIDGYMKL 463
Query: 472 GNVEMATMLRKEMFENQVRQED 493
GN EMA MLRKEM Q RQE+
Sbjct: 464 GNEEMAAMLRKEMSGIQKRQEE 485
>gi|224080263|ref|XP_002306075.1| predicted protein [Populus trichocarpa]
gi|222849039|gb|EEE86586.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 283/476 (59%), Positives = 351/476 (73%), Gaps = 15/476 (3%)
Query: 26 FSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHL----LSLCRSGLTPTQFSQIALGL 81
FST++S PP+ S L ++SLLTHHRSKSRW+HL + + L P FS I L L
Sbjct: 25 FSTTTSPPPNHHS-PLTTAIISLLTHHRSKSRWSHLRSLLTTTTSTPLAPGHFSLITLKL 83
Query: 82 KNNPHLALRFFSFTQHKS-LCKHSLSSYATIIHILSRARLIGPARDVIRVALRSP---EN 137
K+NPHLAL FF FT H S LC H+L SYATIIHILSRARL A+++IR LRS
Sbjct: 84 KSNPHLALSFFHFTLHNSSLCSHNLRSYATIIHILSRARLKAHAQEIIRAGLRSQILYHL 143
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
+++ FEVLVK+YREC SAPFVFDLLIK CLE+K KI+ ++IV+ML S+G+S +S
Sbjct: 144 LKEVRFFEVLVKSYRECDSAPFVFDLLIKSCLELK---KIDGSIEIVKMLRSKGISPSIS 200
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
TCNALI EVSR KG GY +++EVFGL+S +G+ ++R RVRPNVH+FN LMVGF
Sbjct: 201 TCNALISEVSRCKGSFVGYGVFKEVFGLES---CELGEKMRRGFRVRPNVHSFNELMVGF 257
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
YR G E VE++W EM R GC + +SY VL+AVFCE R+ EAE+LW+EMR K + DV
Sbjct: 258 YRNGEVEMVEEIWSEMERFGCVANGFSYGVLIAVFCEGGRLSEAERLWDEMRVKGIMPDV 317
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
VAYNTIIGGFC+ GE+ +AE FREMGLSG+ESS VTFEHL+ GYCR GDV+SAILVY D
Sbjct: 318 VAYNTIIGGFCKAGEVEKAEGLFREMGLSGIESSCVTFEHLIEGYCRIGDVNSAILVYKD 377
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
M R+ F E T+EVLIG LC+++RVFEAL I+++ + P KSY LI GLCE+G
Sbjct: 378 MRRRDFRLEALTMEVLIGGLCEQKRVFEALKIMRSAMRDVSFHPNGKSYELLINGLCEDG 437
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
KMEEALK+Q+EMVGKGF+P+ IY AFI+GY+K GN EMA MLRKEM Q +Q++
Sbjct: 438 KMEEALKLQSEMVGKGFDPNSAIYGAFIEGYVKLGNEEMAAMLRKEMSVAQKQQQE 493
>gi|356538835|ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Glycine max]
Length = 487
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 282/503 (56%), Positives = 365/503 (72%), Gaps = 30/503 (5%)
Query: 1 MAVQILKHIIFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNH 60
MA+QILK ++ +PKP L FS S S +D S +L+ VS+LTHHRSKSRW++
Sbjct: 1 MAIQILKQFSQTL---RPKPWTLF-FSFSCS---NDASQSLVTDAVSILTHHRSKSRWSN 53
Query: 61 LLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARL 120
L S C +G+TP +FS+I L +KN P LALRFF +T+ KSLC H+L+SY++IIH+L+RARL
Sbjct: 54 LRSACPNGITPAEFSEITLHIKNKPQLALRFFLWTKSKSLCNHNLASYSSIIHLLARARL 113
Query: 121 IGPARDVIRVALR-SPENDPK--------LKLFEVLVKTYRECGSAPFVFDLLIKCCLEV 171
A D+IR A+R S +ND + L LFE LVKTYR+ GSAPFVFDLLIK CL+
Sbjct: 114 SSHAYDLIRTAIRASHQNDEENCRFNSRPLNLFETLVKTYRDSGSAPFVFDLLIKACLDS 173
Query: 172 KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSD--- 228
K K++ ++IVRML+SRG+S KVST N+LI V + +GV GY IYRE F LD +
Sbjct: 174 K---KLDPSIEIVRMLLSRGISPKVSTLNSLISRVCKSRGVDEGYAIYREFFRLDEENNE 230
Query: 229 -ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
+ G G RV PNVHT+N LM+ Y++G E+VE +W+EM + +P+ YSYSV
Sbjct: 231 ISKRGSG------FRVTPNVHTYNDLMLCCYQDGLVERVEKIWIEM-KCNYKPNAYSYSV 283
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
LMA FC+E RM +AEKLWEE+R + +E DVV+YNTIIGGFC IG++ RAEEFFREM ++G
Sbjct: 284 LMATFCDEGRMGDAEKLWEELRSEKIEPDVVSYNTIIGGFCTIGDVGRAEEFFREMAVAG 343
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
V +++ T+EHLV GYC GDVDSA+LVY DM R P+ ST++V+I LCDK RV E+L
Sbjct: 344 VGTTASTYEHLVKGYCNIGDVDSAVLVYKDMARSDLRPDASTLDVMIRLLCDKGRVRESL 403
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+ ++ V KF L P EKSY LIKGLC +G+MEEALKVQAEMVGKGF+P+ EIY AF+DG
Sbjct: 404 EFVRCAVGKFDLIPMEKSYEALIKGLCFDGRMEEALKVQAEMVGKGFQPNSEIYGAFVDG 463
Query: 468 YMKEGNVEMATMLRKEMFENQVR 490
Y++ GN EMA LRKEM +NQ++
Sbjct: 464 YVRHGNEEMAEALRKEMLQNQMQ 486
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
++P + VL+ CD+ R+ +A + L + + P SY +I G C G +
Sbjct: 273 NYKPNAYSYSVLMATFCDEGRMGDA-EKLWEELRSEKIEPDVVSYNTIIGGFCTIGDVGR 331
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
A + EM G + Y + GY G+V+ A ++ K+M + +R +
Sbjct: 332 AEEFFREMAVAGVGTTASTYEHLVKGYCNIGDVDSAVLVYKDMARSDLRPD 382
>gi|15226656|ref|NP_179197.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75267579|sp|Q9XIM8.1|PP155_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g15980
gi|5306237|gb|AAD41970.1| hypothetical protein [Arabidopsis thaliana]
gi|330251359|gb|AEC06453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 498
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/502 (52%), Positives = 348/502 (69%), Gaps = 15/502 (2%)
Query: 1 MAVQILKHIIFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNH 60
M+ IL+ I+ KPKP L T+ S+PPS S LI+ VS+LTHHRSKSRW+
Sbjct: 1 MSTSILRRILDPTRKPKPDAILSISLLTTVSSPPSPPSDPLISDAVSILTHHRSKSRWST 60
Query: 61 LLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARL 120
L SL SG TP+QFS+I L L+NNPHL+LRFF FT+ SLC H S +T+IHILSR+RL
Sbjct: 61 LRSLQPSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRL 120
Query: 121 IGPARDVIRVALR----SPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEK 176
A ++IR+ALR + D LK+F L+K+Y CGSAPFVFDLLIK CL+ K +
Sbjct: 121 KSHASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSK---E 177
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
I+ V ++R L SRG++ ++STCNALI EVSR +G +GY++YREVFGLD + +
Sbjct: 178 IDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDD---VSVDEA 234
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAVFCEE 295
K + +++PN TFN++MV FYREG E VE +W EM +GC P+ YSY+VLM +C
Sbjct: 235 KKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCAR 294
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
M EAEK+WEEM+ + V +D+VAYNT+IGG C E+ +A+E FR+MGL G+E + +T+
Sbjct: 295 GLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTY 354
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR---RVFEALDILKA 412
EHLVNGYC+AGDVDS ++VY +M RKGFE +G TIE L+ LCD R RV EA DI+K
Sbjct: 355 EHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKD 414
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
V + +P+ Y L+K LCE+GKM+ AL +QAEMVGKGF+PS E Y AFIDGY G
Sbjct: 415 AVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVG 474
Query: 473 NVEMATMLRKEMFEN-QVRQED 493
+ E + +L EM E+ ++R E+
Sbjct: 475 DEETSALLAIEMAESLKLRAEE 496
>gi|449502417|ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
Length = 499
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 256/462 (55%), Positives = 324/462 (70%), Gaps = 20/462 (4%)
Query: 42 IATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLC 101
I+TVVS+LTH RSKSRW L SLC +G P +FS I L +KNNPHLALRFF +TQ+KSLC
Sbjct: 43 ISTVVSVLTHQRSKSRWRFLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLC 102
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPK--------------LKLFEVL 147
H+L SY+T+IHIL+R RL A+DVI+ A+R+ + + LKLFE L
Sbjct: 103 NHNLISYSTLIHILARGRLRTHAKDVIQTAIRAAQLEDSDNYSKTERFSPSRPLKLFETL 162
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
VKTY+ CGSAPFVFDLLIK L+ K K+++ ++IVRML SRG+S +VST N+LI VS
Sbjct: 163 VKTYKRCGSAPFVFDLLIKALLDSK---KLDSSIEIVRMLRSRGISPQVSTLNSLILLVS 219
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
+ +G Y I+REVFGLD + + VK RV PNVHTFN LM FYR+G +V+
Sbjct: 220 KCQGANVAYAIFREVFGLDCEIEE---EHVKLKGRVSPNVHTFNTLMDCFYRDGFVGRVK 276
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
++W ++A P+ YSYS+LM V CEE+R EAE+LWEEM+ K +E DVVAYNTIIGGF
Sbjct: 277 EIWDQLADSNSTPNSYSYSILMTVLCEEKRTGEAEELWEEMKMKKLEPDVVAYNTIIGGF 336
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ G RAEEF+REM LSG+ES+ T EHL+NGYC GDVDSA+LVY DM RK F
Sbjct: 337 CKAGHTHRAEEFYREMELSGIESTFSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNA 396
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
ST+E LI LC +RR+ EALD+ + PT +++ LI LC+EGK+E A K+QA
Sbjct: 397 STLEGLIRMLCAERRLLEALDVFGFAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQA 456
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+MVGKGF+P+L+IY +FID Y KEGN EM L KEM E Q+
Sbjct: 457 QMVGKGFKPNLKIYQSFIDAYTKEGNAEMVEKLWKEMHEIQL 498
>gi|449455312|ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
gi|449472579|ref|XP_004153637.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
Length = 499
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/462 (55%), Positives = 324/462 (70%), Gaps = 20/462 (4%)
Query: 42 IATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLC 101
I+TVVS+LTH RSKSRW L SLC +G P +FS I L +KNNPHLALRFF +TQ+KSLC
Sbjct: 43 ISTVVSVLTHQRSKSRWRFLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLC 102
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPK--------------LKLFEVL 147
H+L SY+T+IHIL+R RL A+DVI+ A+R+ + + LKLFE L
Sbjct: 103 NHNLISYSTLIHILARGRLRTHAKDVIQTAIRAAQLEDSDNYSKTERFSPSRPLKLFETL 162
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
VKTY+ CGSAPFVFDLLIK L+ K K+++ ++IVRML SRG+S +VST N+LI VS
Sbjct: 163 VKTYKRCGSAPFVFDLLIKALLDSK---KLDSSIEIVRMLRSRGISPQVSTLNSLILLVS 219
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
+ +G Y I+REVFGLD + + VK RV PNVHTFN LM FYR+G +V+
Sbjct: 220 KCQGANVAYAIFREVFGLDCEIEE---EHVKLKGRVSPNVHTFNTLMDCFYRDGFAGRVK 276
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
++W ++A P+ YSYS+LM V CEE+R EAE+LWEEM+ K +E DVVAYNTIIGGF
Sbjct: 277 EIWDQLADSNSTPNSYSYSILMTVLCEEKRTGEAEELWEEMKMKKLEPDVVAYNTIIGGF 336
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ G RAEEF+REM LSG+ES+ T EHL+NGYC GDVDSA+LVY DM RK F
Sbjct: 337 CKAGHTHRAEEFYREMELSGIESTFSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNA 396
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
ST+E LI LC +RR+ EALD+ + PT +++ LI LC+EGK+E A K+QA
Sbjct: 397 STLEGLIRMLCAERRLLEALDVFGFAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQA 456
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+MVG+GF+P+L+IY +FID Y KEGN EM L KEM E Q+
Sbjct: 457 QMVGRGFKPNLKIYQSFIDAYTKEGNAEMVEKLWKEMHEIQL 498
>gi|297741402|emb|CBI32533.3| unnamed protein product [Vitis vinifera]
Length = 299
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/209 (66%), Positives = 166/209 (79%)
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
YSVLMA FC+E RM E EKLWEEMR K +EHD++AYNTIIGGFC IGE+ R EE FREM
Sbjct: 90 YSVLMAAFCDEGRMGEVEKLWEEMRMKKMEHDIMAYNTIIGGFCRIGEIERGEELFREME 149
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
LSG++S+ VT+EHL+NGYC GDVDSA+L+Y DMCRKGF E T++ +I LC+ RRV
Sbjct: 150 LSGIQSTCVTYEHLINGYCEIGDVDSAVLLYKDMCRKGFRAEARTVDGMILLLCNNRRVH 209
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
EAL +L+ + P KSY LIKG CEEGKMEEA K+Q+EMVGKGF+P+LEIYSAF
Sbjct: 210 EALKLLRVAMGNVEFAPRGKSYETLIKGFCEEGKMEEASKLQSEMVGKGFKPTLEIYSAF 269
Query: 465 IDGYMKEGNVEMATMLRKEMFENQVRQED 493
IDGYMK+GN E+A LRKEMFE Q++QE+
Sbjct: 270 IDGYMKQGNKEIAETLRKEMFETQMQQEE 298
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 136/338 (40%), Gaps = 63/338 (18%)
Query: 1 MAVQILKHIIFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNH 60
MAV +K I+F+ P + S SS + + LI+T VS+L H RSKSRW+H
Sbjct: 1 MAVSKVKQILFT-----PLARKTLCLSLSSLPSDQNPTKTLISTAVSILRHQRSKSRWSH 55
Query: 61 LLSLCRSGLTPTQFSQIALGLKNNPHLALRFF--------SFTQHKSL------------ 100
L SL G TPT+ SQI L +KNNPHLAL FF +F +
Sbjct: 56 LQSLFPKGFTPTEASQIVLQIKNNPHLALSFFLCYSVLMAAFCDEGRMGEVEKLWEEMRM 115
Query: 101 --CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
+H + +Y TII R I ++ R S + +E L+ Y E G
Sbjct: 116 KKMEHDIMAYNTIIGGFCRIGEIERGEELFREMELSGIQSTCVT-YEHLINGYCEIGD-- 172
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+++ V + + + +G + T + +I + + V ++
Sbjct: 173 ------------------VDSAVLLYKDMCRKGFRAEARTVDGMILLLCNNRRVHEALKL 214
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
R G V P ++ L+ GF EG E+ + EM G
Sbjct: 215 LRVAMG---------------NVEFAPRGKSYETLIKGFCEEGKMEEASKLQSEMVGKGF 259
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
+P YS + + ++ AE L +EM + ++ +
Sbjct: 260 KPTLEIYSAFIDGYMKQGNKEIAETLRKEMFETQMQQE 297
>gi|125536370|gb|EAY82858.1| hypothetical protein OsI_38069 [Oryza sativa Indica Group]
Length = 459
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 167/463 (36%), Positives = 253/463 (54%), Gaps = 23/463 (4%)
Query: 36 DQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTP-TQFSQIALGLKNNPHLALRFFSF 94
D H A S LT HRS+S+W+HL SL P + + + L L+ PH+AL F F
Sbjct: 16 DADHPYAAAAASALTSHRSRSKWSHLSSLAVPDPLPASAVAAVPLLLRRRPHVALSFHLF 75
Query: 95 TQHKSLCKHS---LSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY 151
+ L S L + H+ + +RL A ++ A R + P ++F L TY
Sbjct: 76 ATRRLLPSGSPPPLLLSVSAAHVAAASRLRHAAISLLSSAAR---HYPHSQIFAALAATY 132
Query: 152 RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
R SAPFVFDLL+ L + + R +++ G ST AL+ +
Sbjct: 133 RRFASAPFVFDLLLLAYLRSRR--DTLAAASVARRILAAGARPLPSTSAALLRSLPSAAA 190
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
+ ++YRE++ S ++ P VHTFN+L++ FYREG + + V
Sbjct: 191 AL---DMYREIYTRPSSRINS---------QLLPTVHTFNSLLLAFYREGKCDDFKVVLQ 238
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM R C + +YS+ MA +C+ + + +A LW+EM + ++ DV AYNT+I G+C +G
Sbjct: 239 EMDRYSCVHNVCTYSIRMAAYCDSKEVEKARGLWDEMVEGGIQPDVAAYNTMISGYCGVG 298
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
E+ AEE F++M + G++ S TFE L G+CR GD+D+A+LV DM R+GF +E
Sbjct: 299 EVGMAEEMFKDMEMGGIDPSVTTFEWLARGHCRVGDIDAAMLVRADMSRRGFRMAAEVVE 358
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
++ LC K+RV EAL +LK + K P+ + Y LI+ LCE+G++E A+++QAEM G
Sbjct: 359 EVVNVLCQKKRVKEALGVLKEEMRKEEFVPSRECYEVLIRELCEQGEVEVAMRLQAEMAG 418
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
GF+ E+Y AF+ Y K + EMA LRKE+ + + EDG
Sbjct: 419 MGFKAGSEVYCAFVCAYEKAEDYEMAEKLRKEL--SVINIEDG 459
>gi|326490157|dbj|BAJ94152.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 475
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 168/447 (37%), Positives = 240/447 (53%), Gaps = 17/447 (3%)
Query: 49 LTHHRSKSRWNHLLSLCRSGLTP-TQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSS 107
LT HR+KS+W+ L SL P + S + L L++ PH+AL F F + L S
Sbjct: 38 LTSHRAKSKWSQLASLPLPDPLPASAVSAVLLLLRHRPHVALSFHQFALRRLLPARSAPP 97
Query: 108 YATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKC 167
A R I V + + ++F L TYR SAPFVFDLL+
Sbjct: 98 LVLSASAAHVAAASRLRRAAISVLSSATCHYSPSQIFNALAATYRRFASAPFVFDLLLLA 157
Query: 168 CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDS 227
L + + I R ++ G ST L + + S E+Y +++
Sbjct: 158 YLRSRR--EPLAAASIARRYLASGACPLPSTVALLFRSLPCAE---SALEMYHQIY---- 208
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
G RV++ P TFN+L++ FYR G E + V EM R C+ + +Y++
Sbjct: 209 ---TRPGPRTNRVLQ--PTAQTFNSLLLAFYRHGKSEDFDIVLDEMDRYSCKHNVGTYNI 263
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
MA C++R M +A LW+EM ++ DV +YNT+IGG+C +M AEE +++M +SG
Sbjct: 264 RMAACCDDREMEKARGLWDEMVQGGIQPDVTSYNTMIGGYCAARDMGMAEEMYKDMEISG 323
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
E S TFE LV G+CR GDVD+A+LV D+ R+GF+ +E ++ LC KRRV EAL
Sbjct: 324 TEPSVTTFEWLVRGHCRIGDVDAAMLVRVDLRRRGFDMAAEVVEEMVDRLCRKRRVEEAL 383
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
DIL+A + + P+ SY LI+G CEEG++E A+++QAEMVGKGF+ E+Y AF+
Sbjct: 384 DILRAEMKREEFTPSRGSYEVLIRGFCEEGEVEVAMRLQAEMVGKGFKAGGEVYHAFVCA 443
Query: 468 YMKEGNVEMATMLRKEMFENQVRQEDG 494
Y K + EM LRKEM V EDG
Sbjct: 444 YEKAEDHEMVERLRKEM--AAVGIEDG 468
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 21/235 (8%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
+++ + C + + +EK D ++ G+ V++ N +I + + E+Y
Sbjct: 260 TYNIRMAACCDDREMEKARGLWD---EMVQGGIQPDVTSYNTMIGGYCAARDMGMAEEMY 316
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
+++ + P+V TF L+ G R G + V V++ R G +
Sbjct: 317 KDM----------------EISGTEPSVTTFEWLVRGHCRIGDVDAAMLVRVDLRRRGFD 360
Query: 280 PDCYSYSVLMAVFCEERRMREA-EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
++ C +RR+ EA + L EM+ + +Y +I GFCE GE+ A
Sbjct: 361 MAAEVVEEMVDRLCRKRRVEEALDILRAEMKREEFTPSRGSYEVLIRGFCEEGEVEVAMR 420
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
EM G ++ + V Y +A D + + +M G E +GS ++ L
Sbjct: 421 LQAEMVGKGFKAGGEVYHAFVCAYEKAEDHEMVERLRKEMAAVGIE-DGSDLDCL 474
>gi|297729105|ref|NP_001176916.1| Os12g0407800 [Oryza sativa Japonica Group]
gi|77554769|gb|ABA97565.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125579103|gb|EAZ20249.1| hypothetical protein OsJ_35852 [Oryza sativa Japonica Group]
gi|215741220|dbj|BAG97715.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255670246|dbj|BAH95644.1| Os12g0407800 [Oryza sativa Japonica Group]
Length = 459
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 243/450 (54%), Gaps = 15/450 (3%)
Query: 36 DQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTP-TQFSQIALGLKNNPHLALRFFSF 94
D H A S LT HRS+S+W+HL SL P + + + L L+ PH+AL F F
Sbjct: 16 DADHPYAAAAASALTSHRSRSKWSHLSSLAVPDPLPASAVAAVPLLLRRRPHVALSFHLF 75
Query: 95 TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYREC 154
+ L S + A R I + + + P ++F L TYR
Sbjct: 76 ATRRLLPSGSPPPLLLSVSAAHVAAASRLRRAAISLLSSAARHYPHSQIFAALAATYRRF 135
Query: 155 GSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVIS 214
SAPFVFDLL+ L + + R +++ G ST AL+ + +
Sbjct: 136 ASAPFVFDLLLLAYLRSRR--DALAAASVARRILAAGAHPLPSTSAALLRSLPSAAAAL- 192
Query: 215 GYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
++YRE++ S ++ P VHTFN+L++ FYREG + + V EM
Sbjct: 193 --DMYREIYTRPSSRINS---------QLLPTVHTFNSLLLAFYREGKCDVFKVVLQEMD 241
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
R C + +Y++ MA +C+ + + +A LW+EM + ++ DV AYNT+I G+C +GE+
Sbjct: 242 RYSCVHNVCTYNIRMAAYCDSKEVEKARGLWDEMVEGGIQPDVPAYNTMISGYCGVGEVG 301
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
AEE F++M + G++ S TFE LV G+CR GD+D+A+LV DM R+GF+ +E ++
Sbjct: 302 MAEEMFKDMEMGGIDPSVTTFEWLVRGHCRVGDIDAAMLVRADMSRRGFQMAAEVVEEVV 361
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
LC K+RV EAL +LK + K P+ + Y LI+ LCE+G++E A+++QAEM G GF
Sbjct: 362 NVLCQKKRVKEALGVLKEEMRKEEFVPSRECYEVLIRELCEQGEVEVAMRLQAEMAGMGF 421
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ E+Y AF+ Y K + EMA LRKE+
Sbjct: 422 KVGSEVYCAFVCAYEKAEDYEMAEKLRKEL 451
>gi|357150734|ref|XP_003575558.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Brachypodium distachyon]
Length = 477
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 170/463 (36%), Positives = 247/463 (53%), Gaps = 22/463 (4%)
Query: 30 SSTPPS-----DQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTP-TQFSQIALGLKN 83
S+T PS D +H A S LT HRSKS+W+ L SL P + S + L L+
Sbjct: 14 STTDPSSPYFIDTAHPYAAAAASALTSHRSKSKWSQLSSLPLPDPLPASAVSAVILLLRR 73
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPE--NDPKL 141
PH+AL F +F + L S S I+ + +++ S +
Sbjct: 74 RPHVALSFHNFALRRLLSSPSPSPPPLILSASAAHVAAASRLRRAAISVLSSATCHYSPA 133
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
++F L TYR SAPFVFDLL+ +++ I R +S G ST A
Sbjct: 134 QIFNALAATYRRFASAPFVFDLLL--LAYIRSRRDPLAAASIARRYLSAGACPLPSTTAA 191
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
L + + E+Y +++ L G R ++ P V TFN+L++ YR+
Sbjct: 192 LFRSLPSADAAL---EMYHQIYTLP-------GPRTNRWLQ--PTVQTFNSLLLALYRQA 239
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+E V EM R C+ + +Y++ MA FC+ R M +A LW+EM + ++ DV AYN
Sbjct: 240 KYEDFNIVLGEMDRYSCKHNVGTYNIRMAAFCDGREMEKARGLWDEMVNGGIQPDVTAYN 299
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
T+IGG+C GE+ AEE F++M + G+E S TFE LV G+CRAGDVD+A+LV +DM R+
Sbjct: 300 TMIGGYCGAGEVGMAEEMFKDMEICGIEPSVTTFEWLVRGHCRAGDVDAAMLVRSDMRRR 359
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
GF +E ++ LC RRV EAL IL+A + + P+ SY LI+ CEEG++E
Sbjct: 360 GFGIGAEVVEEVVDGLCQNRRVAEALGILRAEMKREEFAPSRGSYEVLIRRFCEEGEVEV 419
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
AL++QAEM GKGF+ ++Y AF+ Y K + +M LR EM
Sbjct: 420 ALRLQAEMAGKGFKAGSDVYHAFVCAYEKAEDYDMVERLRNEM 462
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 2/151 (1%)
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
KD++ + + P+V TF L+ G R G + V +M R G ++ C+
Sbjct: 319 KDME-ICGIEPSVTTFEWLVRGHCRAGDVDAAMLVRSDMRRRGFGIGAEVVEEVVDGLCQ 377
Query: 295 ERRMREAEK-LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
RR+ EA L EM+ + +Y +I FCE GE+ A EM G ++ S
Sbjct: 378 NRRVAEALGILRAEMKREEFAPSRGSYEVLIRRFCEEGEVEVALRLQAEMAGKGFKAGSD 437
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
+ V Y +A D D + N+M G E
Sbjct: 438 VYHAFVCAYEKAEDYDMVERLRNEMSAIGIE 468
>gi|414886793|tpg|DAA62807.1| TPA: hypothetical protein ZEAMMB73_733789 [Zea mays]
Length = 466
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/455 (35%), Positives = 247/455 (54%), Gaps = 25/455 (5%)
Query: 36 DQSHNLIATVVSLLTHHRSKSRWNHLLSL-CRSGLTPTQFSQIALGLKNNPHLALRFFSF 94
D H + LT HR+KS+W+HL S+ S + + + L L++ PH ALRF +F
Sbjct: 26 DAGHPYAVAAATALTSHRTKSKWSHLSSVPVPSPFLASAAAGVLLLLRHRPHTALRFHAF 85
Query: 95 TQHKSLCKHS---LSSYATIIHILSRARLIGPARDVIRVALR--SPENDPKLKLFEVLVK 149
+ L S L A H+ + +RL GPA ++ A R SP ++F L
Sbjct: 86 AIRRLLPSRSPPPLVFSAAAAHVAAASRLRGPALSILASASRHCSPA-----QIFNALAA 140
Query: 150 TYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG 209
TYR SAPF+FDLL+ L + + + R +++ G ST AL+ +
Sbjct: 141 TYRCFASAPFIFDLLLLAYLRSR--RDVLAAASVARRILAAGARPLPSTAAALLRSLPSA 198
Query: 210 KGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDV 269
+ ++Y +++ S + + + P VHTFN+L++ F+REG ++ + V
Sbjct: 199 TAAL---DMYHQIYTHPSPRSNHL---------LLPTVHTFNSLLLAFHREGKCDEFKIV 246
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
EM + C+ + +YS+ M+ +C + +A LW+EM + ++ D+ AYNT+I G+C
Sbjct: 247 LQEMDKYSCKHNVCTYSIRMSGYCNGGHVDKARTLWDEMIQEGIQPDITAYNTMISGYCH 306
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
GE+ AEE F+ M + G++SS+ TFE LV G+C A DV++A+LV DM RKGF
Sbjct: 307 SGEVGVAEEMFKNMLMGGIDSSATTFEWLVRGHCMARDVEAAMLVRADMKRKGFGLAPEV 366
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
+E L+ LC RV + L +L+ + + PT +SY LI G C+ GK+E A+++QAEM
Sbjct: 367 VEELLDGLCQNGRVEDGLSVLREEMKREEFVPTRRSYEVLIMGFCDGGKVEVAIRLQAEM 426
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
GKGF E+Y AFI Y K N EM LRKEM
Sbjct: 427 AGKGFTAGSEVYYAFISAYEKSENYEMVEKLRKEM 461
>gi|242050302|ref|XP_002462895.1| hypothetical protein SORBIDRAFT_02g033980 [Sorghum bicolor]
gi|241926272|gb|EER99416.1| hypothetical protein SORBIDRAFT_02g033980 [Sorghum bicolor]
Length = 463
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 160/444 (36%), Positives = 244/444 (54%), Gaps = 25/444 (5%)
Query: 47 SLLTHHRSKSRWNHLLSL-CRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHS- 104
+ LT HR+KS+W+HL S+ S L + + + L L++ PH ALRF +F + L S
Sbjct: 34 TALTSHRTKSKWSHLSSVPVPSPLPASATAAVLLLLRHRPHTALRFHAFALRRLLPSRSP 93
Query: 105 --LSSYATIIHILSRARLIGPARDVIRVALR--SPENDPKLKLFEVLVKTYRECGSAPFV 160
L A+ H+ + +RL G A V+ A R SP ++F L TYR SAPFV
Sbjct: 94 PPLVFSASAAHVAAASRLRGAALTVLASASRHYSPA-----QIFNALAATYRRFASAPFV 148
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
FDLL+ L + + R +++ G ST AL+ + + ++Y
Sbjct: 149 FDLLLLAYLRSRR--DALAAASVARRILAAGARPLPSTAAALLRSLPSATAAL---DMYH 203
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
+++ S + + + P VHTFN+L++ F+REG + + V EM + C+
Sbjct: 204 QIYTHPSPRSNHL---------LLPTVHTFNSLLLAFHREGKCDGFKIVLQEMGKYSCKH 254
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+ +YS++MA +C + +A LW+EM + ++ DV AYNT+IGG+C GE+ AEE F
Sbjct: 255 NVCTYSIMMAEYCNGGHVEKARALWDEMIQEGIQPDVTAYNTMIGGYCHSGEVGMAEEMF 314
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
+ M + ++ S+ T+E LV G+C + D ++A+LV DM R+GF IE L+ LC
Sbjct: 315 KNMLMGEIDPSATTYEWLVRGHCMSRDAEAAMLVRADMKRRGFGLAPEAIEELLDGLCQN 374
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
RV + L +L+ + + PT +SY LI+G C EG++E A+++QAEM GKGF E+
Sbjct: 375 GRVEDGLGVLREEMKREEFVPTRRSYEVLIRGFCGEGEVEVAIRLQAEMAGKGFNAGSEV 434
Query: 461 YSAFIDGYMKEGNVEMATMLRKEM 484
Y AFI Y K N EM LRKEM
Sbjct: 435 YHAFISAYEKSENYEMVEKLRKEM 458
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y ++ C G +E+A + EM+ +G +P + Y+ I GY G V MA +EM
Sbjct: 258 TYSIMMAEYCNGGHVEKARALWDEMIQEGIQPDVTAYNTMIGGYCHSGEVGMA----EEM 313
Query: 485 FENQVRQE 492
F+N + E
Sbjct: 314 FKNMLMGE 321
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 145/477 (30%), Positives = 234/477 (49%), Gaps = 47/477 (9%)
Query: 20 PQLLS---QFSTSSSTPPSDQSHNLIAT-VVSLLTHHRSKSRWNHLLSLCRSGLTPTQFS 75
P+L+S +FS+ SST SH L+ ++LL H +HL SL S TP S
Sbjct: 13 PELVSSKARFSSLSST-----SHALLVDKAITLLKFHP-----HHLDSL-SSRFTPQSAS 61
Query: 76 QIALGLKNNPHLALRFFSFTQHK----SLCKHSLSSYATIIHILSRARLIGPARDVIRVA 131
L + + L L+F ++ ++ S CK +HIL+R +L A+ + +
Sbjct: 62 YFLLKSQFDQTLTLKFLTWARNHPFFDSHCK------CLSLHILTRFKLYKTAQTLAQEL 115
Query: 132 LRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRG 191
S + +F+ L +Y S+ VFDL++K ++ I+ V+ + + S G
Sbjct: 116 ALSASDPSGSSIFQCLKDSYHVYNSSSAVFDLMVK---SYSHLNMIDQAVNTINLAKSSG 172
Query: 192 LSVKVSTCNALIWEVSRGKGVI--SGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
V + N+++ + R +G + S E+YRE+ RV PNV+T
Sbjct: 173 FMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIR----------------SRVSPNVYT 216
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N L+ GF G +K + EM R GC P+ +Y+ L+ +C+ R+ EA L + M
Sbjct: 217 YNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMS 276
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K ++ ++++YN II G C G M A E EMG G VT+ L+NGYC+ G+
Sbjct: 277 SKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFH 336
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A++++ +M R G P T LI +C R + A++ ++ GL P E++Y L
Sbjct: 337 QALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR-GLRPNERTYTTL 395
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
I G +G + EA ++ EM GF PS+ Y+AFI G+ +E A + +EM E
Sbjct: 396 IDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVE 452
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 155/351 (44%), Gaps = 67/351 (19%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++ G+S V T ALI + + + + E + D R+ +RPN
Sbjct: 345 MVRNGVSPSVVTYTALINSMCKARNLNRAMEFF----------------DQMRIRGLRPN 388
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
T+ L+ GF R+G + + EM G P +Y+ + C RM EA + +
Sbjct: 389 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 448
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV------- 359
EM +K + DVV+Y+TII GFC GE+ RA + +EM GV +VT+ L+
Sbjct: 449 EMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR 508
Query: 360 ----------------------------NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
N YC GD++ A+ ++++M KGF P+ T
Sbjct: 509 RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYS 568
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTE---------------KSYMFLIKGLCEE 436
VLI L + R EA +L + + + P++ KS + LIKG C +
Sbjct: 569 VLINGLNKQARTREAKRLLFKLIYEESV-PSDVTYDTLIENCSNIEFKSVVALIKGFCMK 627
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
G M EA +V MV + +P +Y+ I G+ + GN+ A L KEM +
Sbjct: 628 GLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHS 678
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 90/175 (51%), Gaps = 3/175 (1%)
Query: 317 VVAYNTIIGGFCEIGEMAR--AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
V++YN+++ + AEE +REM S V + T+ L+ G+C G++ +
Sbjct: 177 VLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGC 236
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
+ +M R G P T LI C R+ EA +LK+ K G+ P SY +I GLC
Sbjct: 237 FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK-GMQPNLISYNVIINGLC 295
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EG M+EA ++ EM KGF P Y+ ++GY KEGN A ++ EM N V
Sbjct: 296 REGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGV 350
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 120/300 (40%), Gaps = 51/300 (17%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V +++ ++ GF R+G ++ + EM G PD +YS L+ CE RR+ EA L
Sbjct: 457 PDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDL 516
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG--- 361
+EM D + D Y T+I +C G++ +A EM G +VT+ L+NG
Sbjct: 517 SQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNK 576
Query: 362 -----------------------------------------------YCRAGDVDSAILV 374
+C G + A V
Sbjct: 577 QARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRV 636
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
+ M + +P + V+I C + +A ++ K ++ G P + + LIK L
Sbjct: 637 FESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYK-EMIHSGFVPHTVTVITLIKALF 695
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+EG EE +V + + E+ ++ KEGN+E + +M ++ + G
Sbjct: 696 KEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPNSG 755
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 212/429 (49%), Gaps = 29/429 (6%)
Query: 62 LSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLI 121
L+L S TP S + L + + L L+F + + + S +HIL+R +L
Sbjct: 38 LTLLSSHFTPQASSNLLLKSQFDSSLVLKFLDWARSQQF--FSFQCKCLALHILTRYKLY 95
Query: 122 GPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCV 181
A+ + + + ++ LF+ L +Y +C S+ VFDL++K C V I K +
Sbjct: 96 KTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINK---AL 152
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE-IYREVFGLDSDATAGIGKDVKRV 240
IV + S G V + NA++ V R K + E I++E+ +G
Sbjct: 153 SIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM------VESG-------- 198
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V PNV+T+N L+ GF G E + EM R GC P+ +Y+ ++ +C+ R++ E
Sbjct: 199 --VSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGE 256
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A KL M K + ++++YN +I G C G+M E EM VTF L+N
Sbjct: 257 AFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLIN 316
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKF 417
GYC G+ A++++ +M + G P T LI +C + R E LD ++ R
Sbjct: 317 GYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDR---- 372
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
GL P ++Y LI G ++G +++A ++ EMV GF P++ Y+A I+G+ G +E A
Sbjct: 373 GLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDA 432
Query: 478 TMLRKEMFE 486
+ L +EM E
Sbjct: 433 SGLLQEMIE 441
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 211/481 (43%), Gaps = 68/481 (14%)
Query: 64 LCRSGLTPTQFSQIAL----GLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRAR 119
+ SG++P ++ L N + L FF ++ C ++ +Y TII + R
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFG-EMERNGCLPNVVTYNTIIDAYCKLR 252
Query: 120 LIGPARDVIRV-ALRSPENDPKLKLFEVLVK------------------TYRECGSAPFV 160
IG A ++R+ AL+ +P L + V++ + R
Sbjct: 253 KIGEAFKLLRLMALKGL--NPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI---------------WE 205
F+ LI V N + + + ++ GLS V T LI +
Sbjct: 311 FNTLINGYCNVGNFHQ---ALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLD 367
Query: 206 VSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYR 259
R +G+ Y + +D + G K ++++ P + T+NAL+ G
Sbjct: 368 QMRDRGLHPNGRTYTTL--IDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCI 425
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G E + EM G PD SYS +++ FC + + +A +L EM K + DV
Sbjct: 426 LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
Y+++I G C+ + + F+EM G+ VT+ L+N YC GD+D A+ ++++M
Sbjct: 486 YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE---------------K 424
+KGF P+ T VLI + R EA +L + + + P E K
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV-PNEITYNTLIDNCNNLEFK 604
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
S + L+KG C +G M EA +V M+ KG++ + E+Y+ I G+ K GN+E A L KEM
Sbjct: 605 SALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEM 664
Query: 485 F 485
Sbjct: 665 L 665
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 163/355 (45%), Gaps = 53/355 (14%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ KI ++R++ +GL+ + + N +I + R + EI E+
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM----------- 299
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
KR R P+ TFN L+ G+ G F + + EM + G P+ +Y+ L+ C
Sbjct: 300 ---SKR--RYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMC 354
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + A + ++MRD+ + + Y T+I GF + G + +A + +EM +G + +
Sbjct: 355 KAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTII 414
Query: 354 TFEHLVNGYCRAG-------------------DVDSAILVYNDMCR-------------- 380
T+ L+NG+C G DV S + + CR
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474
Query: 381 --KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
KG P+ +T LI LC +RR+ E D+ + ++ GL P E +Y LI C EG
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQ-EMLSLGLPPDEVTYTSLINAYCIEGD 533
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT-MLRKEMFENQVRQE 492
+++AL++ EM+ KGF P + Y+ I+G+ K+ + A +L K ++E V E
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNE 588
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 127/284 (44%), Gaps = 41/284 (14%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATA- 231
+++E + ++++G+S V+T ++LI + + + + ++++E+ GL D
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTY 521
Query: 232 -------GIGKDVKRVVRVR---------PNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
I D+ + +R+ P++ T+N L+ GF ++ ++ + + +++
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY 581
Query: 276 LGCEPDCYSYSVL---------------MAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
P+ +Y+ L M FC + M EA+++ E M K + + Y
Sbjct: 582 EESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVY 641
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG-YCRAGDVD-SAILVYN-D 377
N II G ++G + +A ++EM SG SVT L Y +V+ + +L Y
Sbjct: 642 NVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLK 701
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
CR E + +VLIG + + ++LK + GL P
Sbjct: 702 SCRI---TEAALAKVLIGINSKEGNMDAVFNVLKDMALS-GLLP 741
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 212/429 (49%), Gaps = 29/429 (6%)
Query: 62 LSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLI 121
L+L S TP S + L + + L L+F + + + S +HIL+R +L
Sbjct: 38 LTLLSSHFTPQASSNLLLKSQFDSSLVLKFLDWARSQQF--FSFQCKCLALHILTRYKLY 95
Query: 122 GPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCV 181
A+ + + + ++ LF+ L +Y +C S+ VFDL++K C V I K +
Sbjct: 96 KTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINK---AL 152
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE-IYREVFGLDSDATAGIGKDVKRV 240
IV + S G V + NA++ V R K + E I++E+ +G
Sbjct: 153 SIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM------VESG-------- 198
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V PNV+T+N L+ GF G E + EM R GC P+ +Y+ ++ +C+ R++ E
Sbjct: 199 --VSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGE 256
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A KL M K + ++++YN +I G C G+M E EM VTF L+N
Sbjct: 257 AFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLIN 316
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKF 417
GYC G+ A++++ +M + G P T LI +C + R E LD ++ R
Sbjct: 317 GYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDR---- 372
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
GL P ++Y LI G ++G +++A ++ EMV GF P++ Y+A I+G+ G +E A
Sbjct: 373 GLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDA 432
Query: 478 TMLRKEMFE 486
+ L +EM E
Sbjct: 433 SGLLQEMIE 441
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 212/478 (44%), Gaps = 62/478 (12%)
Query: 64 LCRSGLTPTQFSQIAL--GLKNNPHLALRFFSFTQ-HKSLCKHSLSSYATIIHILSRARL 120
+ SG++P ++ L G +L + F F + ++ C ++ +Y TII + R
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253
Query: 121 IGPARDVIRV-ALRSPENDPKLKLFEVLVK------------------TYRECGSAPFVF 161
IG A ++R+ AL+ +P L + V++ + R F
Sbjct: 254 IGEAFKLLRLMALKGL--NPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
+ LI V N + + + ++ GLS V T LI + + + E +
Sbjct: 312 NTLINGYCNVGNFHQ---ALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368
Query: 222 VFG-------------LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGA 262
+ +D + G K ++++ P + T+NAL+ G G
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
E + EM G PD SYS +++ FC + + +A +L EM K + DV Y++
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G C+ + + F+EM G+ VT+ L+N YC GD+D A+ ++++M +KG
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE---------------KSYM 427
F P+ T VLI + R EA +L + + + P E KS +
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV-PNEITYNTLIDNCNNLEFKSAL 607
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
L+KG C +G M EA +V M+ KG++ + E+Y+ I G+ K GN+E A L KEM
Sbjct: 608 ALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEML 665
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 163/355 (45%), Gaps = 53/355 (14%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ KI ++R++ +GL+ + + N +I + R + EI E+
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM----------- 299
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
KR R P+ TFN L+ G+ G F + + EM + G P+ +Y+ L+ C
Sbjct: 300 ---SKR--RYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMC 354
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + A + ++MRD+ + + Y T+I GF + G + +A + +EM +G + +
Sbjct: 355 KAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTII 414
Query: 354 TFEHLVNGYCRAG-------------------DVDSAILVYNDMCR-------------- 380
T+ L+NG+C G DV S + + CR
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474
Query: 381 --KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
KG P+ +T LI LC +RR+ E D+ + ++ GL P E +Y LI C EG
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQ-EMLSLGLPPDEVTYTSLINAYCIEGD 533
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT-MLRKEMFENQVRQE 492
+++AL++ EM+ KGF P + Y+ I+G+ K+ + A +L K ++E V E
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNE 588
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 127/284 (44%), Gaps = 41/284 (14%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATA- 231
+++E + ++++G+S V+T ++LI + + + + ++++E+ GL D
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTY 521
Query: 232 -------GIGKDVKRVVRVR---------PNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
I D+ + +R+ P++ T+N L+ GF ++ ++ + + +++
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY 581
Query: 276 LGCEPDCYSYSVL---------------MAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
P+ +Y+ L M FC + M EA+++ E M K + + Y
Sbjct: 582 EESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVY 641
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG-YCRAGDVD-SAILVYN-D 377
N II G ++G + +A ++EM SG SVT L Y +V+ + +L Y
Sbjct: 642 NVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLK 701
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
CR E + +VLIG + + ++LK + GL P
Sbjct: 702 SCRI---TEAALAKVLIGINSKEGNMDAVFNVLKDMALS-GLLP 741
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 223/456 (48%), Gaps = 23/456 (5%)
Query: 31 STPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALR 90
S P + +L V++ H S W L SL + LTP + I L ++ + L+L
Sbjct: 22 SLKPXTKGQDL--DFVNVAHSHLIHSDWKKLTSL-STHLTPFRVKHILLKIQKDHVLSLE 78
Query: 91 FFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKT 150
FF++ Q ++ H+L +++ I+HIL++ R A +++ L D KLFE ++ +
Sbjct: 79 FFNWVQTENPSSHTLETHSMILHILTKNRKFKSAELILKSVLVKGFIDLPDKLFEAILYS 138
Query: 151 YRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
YR C S+P VFD L K + +++K D + G V +CNA + +
Sbjct: 139 YRMCDSSPRVFDSLFK---TLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLH 195
Query: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
V Y+E+ R R+ PNV+T N +M F + G EK V+
Sbjct: 196 RVDIALAFYKEM----------------RRCRISPNVYTRNMVMRAFCKSGKLEKAVQVF 239
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
EM +G P+ SY+ L+ +C + + A KL MR K VE +VV +N++I GFC+
Sbjct: 240 EEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKE 299
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G++ A + F EM + V +++T+ L+NG+ + G+ + +Y +M R G + + T
Sbjct: 300 GKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTY 359
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
LI LC + + +A ++K + K L P ++ LI G C + A ++ MV
Sbjct: 360 NALILGLCKEGKTKKAAYMVK-ELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMV 418
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
G P+ + ++ + + K + E A ++ EMFE
Sbjct: 419 RIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFE 454
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 111/254 (43%), Gaps = 38/254 (14%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
R+ P V F++L F D +++M G P S + ++ + R+
Sbjct: 140 RMCDSSPRV--FDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRV 197
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
A ++EMR + +V N ++ FC+ G++ +A + F EM G+ + ++ L
Sbjct: 198 DIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTL 257
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+ GYCR G ++SA+ + N M KG E A VV F
Sbjct: 258 IMGYCRKGLLNSAVKLKNSMRAKGVE---------------------------ANVVTFN 290
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
LI G C+EGK+ EA KV +EM P+ Y+ I+G+ + GN EM
Sbjct: 291 S---------LIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGR 341
Query: 479 MLRKEMFENQVRQE 492
L +EM N V+ +
Sbjct: 342 RLYEEMSRNGVKAD 355
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 102/222 (45%), Gaps = 16/222 (7%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+ + V + + ++G+ V T N+LI + + +++ E+
Sbjct: 267 LNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEM-------------- 312
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
+V+ V PN T+N L+ G + G E ++ EM+R G + D +Y+ L+ C+E
Sbjct: 313 --KVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEG 370
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ ++A + +E+ +N+ + ++ +I G C RA + ++ M G + TF
Sbjct: 371 KTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFN 430
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
LV+ +C+ D + A LV +M + F P + + LC
Sbjct: 431 MLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGLC 472
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 5/147 (3%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+ ++ T+NAL++G +EG +K + E+ + P+ ++S L++ C A
Sbjct: 352 VKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAF 411
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L++ M + +N ++ FC+ + A EM S + +G
Sbjct: 412 QLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGL 471
Query: 363 CRAGDVDSAI-----LVYNDMCRKGFE 384
C G A+ L M KGFE
Sbjct: 472 CCCGKEHLAMKLSSELKARHMMTKGFE 498
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 238/451 (52%), Gaps = 28/451 (6%)
Query: 58 WNH--LLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHIL 115
WN ++ L S L P S+I LGL+ +P LAL+FF + + +H+ SY I+H++
Sbjct: 114 WNDPKIVVLFDSALAPIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLV 173
Query: 116 SRARLIGPARDVIRVALRSPEND---PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVK 172
RAR+ A D ++ + + D P +F++L T C S VFD+L +E+
Sbjct: 174 FRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELG 233
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR-GKGVIS--------GYEIYREVF 223
+E+ C RM R L K +CN L+ +S+ G G + G I VF
Sbjct: 234 LLEEANECFS--RMRNFRTLP-KARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVF 290
Query: 224 G----LDSDATAGIGKDVKRV-VRVR-----PNVHTFNALMVGFYREGAFEKVEDVWVEM 273
+D G ++ +R+ V++R P+V T+N+L+ G+ + G+ E+V ++ EM
Sbjct: 291 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 350
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
+GC PD +Y+ L+ +C+ +M A + + EM++ ++ +VV Y+T+I FC+ G M
Sbjct: 351 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMM 410
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
A + F +M +G+ + T+ L++ C+AG++ A + NDM + G + T L
Sbjct: 411 QGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 470
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ LC R+ EA ++ ++ ++K G+ P ++ Y L+ G + +ME+A+K+ +M
Sbjct: 471 LDGLCKAGRMIEAEEVFRS-MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 529
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+P L +Y + I G+ + +E ++ +EM
Sbjct: 530 IKPDLILYGSIIWGHCSQRKLEETKLILEEM 560
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 143/307 (46%), Gaps = 17/307 (5%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++ G+ + + T AL+ + + +I E++R + KD + PN
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML-----------KD-----GISPN 498
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ AL+ G+ + E + +M +PD Y ++ C +R++ E + + E
Sbjct: 499 QQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILE 558
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
EM+ + + + V TII + + G+ + A FF+EM GVE++ VT+ L++G C+AG
Sbjct: 559 EMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAG 618
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
V+ A+ + M G +P + LI LC K E+ L + G+ P ++
Sbjct: 619 IVELAVDYFCRMLSLGLQPNVAVYTSLIDGLC-KNNCIESAKKLFDEMQCRGMTPDITAF 677
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI G + G ++EAL + + M E L +Y++ + G+ + G + A EM E
Sbjct: 678 TALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIE 737
Query: 487 NQVRQED 493
+ E+
Sbjct: 738 KGILPEE 744
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 77/149 (51%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV + +L+ G + E + ++ EM G PD +++ L+ + ++EA
Sbjct: 635 LQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEAL 694
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L M + +E D+ Y +++ GF + GE+ +A +FF EM G+ V L+ Y
Sbjct: 695 VLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREY 754
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ G +D AI + N+M R G E +T++
Sbjct: 755 YKRGQLDEAIELKNEMERMGLITESATMQ 783
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 160/388 (41%), Gaps = 50/388 (12%)
Query: 66 RSGLTPTQFSQIALGLKN----NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLI 121
R+GL P +F+ +L N N A + + + K ++ +Y ++ L +A +
Sbjct: 422 RTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV-KLNIVTYTALLDGLCKAGRM 480
Query: 122 GPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCV 181
A +V R L+ + P +++ LV Y IK E++E +
Sbjct: 481 IEAEEVFRSMLKDGIS-PNQQVYTALVHGY-------------IKA-------ERMEDAM 519
Query: 182 DIVRMLMSRGLSVKVSTCNALIW---------------EVSRGKGVISGYEIYREVFGLD 226
I++ + + + ++IW E + +G+ + I + +D
Sbjct: 520 KILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTI--ID 577
Query: 227 SDATAGIGKDVKRV------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
+ AG D V V + T+ L+ G + G E D + M LG +P
Sbjct: 578 AYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQP 637
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+ Y+ L+ C+ + A+KL++EM+ + + D+ A+ +I G + G + A
Sbjct: 638 NVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLI 697
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
M +E + LV+G+ + G++ A +N+M KG PE L+ E +
Sbjct: 698 SRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKR 757
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMF 428
++ EA++ LK + + GL + F
Sbjct: 758 GQLDEAIE-LKNEMERMGLITESATMQF 784
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 237/451 (52%), Gaps = 28/451 (6%)
Query: 58 WNH--LLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHIL 115
WN ++ L S L P S+I LGL+ +P LAL+FF + + +H+ SY I+H++
Sbjct: 55 WNDPKIVVLFDSALAPIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLV 114
Query: 116 SRARLIGPARDVIRVALRSPEND---PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVK 172
RAR+ A D ++ + + D P +F++L T C S VFD+L +E+
Sbjct: 115 FRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELG 174
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR-GKGVIS--------GYEIYREVF 223
+E+ C RM R L K +CN L+ +S+ G G + G I VF
Sbjct: 175 LLEEANECFS--RMRNFRTLP-KARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVF 231
Query: 224 G----LDSDATAGIGKDVKRV-VRVR-----PNVHTFNALMVGFYREGAFEKVEDVWVEM 273
+D G ++ +R+ V++R P+V T+N+L+ G+ + G+ E+V ++ EM
Sbjct: 232 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 291
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
+GC PD +Y+ L+ +C+ +M A + + EM++ ++ +VV Y+T+I FC+ G M
Sbjct: 292 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMM 351
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
A + +M +G+ + T+ L++ C+AG++ A + NDM + G + T L
Sbjct: 352 QGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 411
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ LC R+ EA ++ ++ ++K G+ P ++ Y L+ G + +ME+A+K+ +M
Sbjct: 412 LDGLCKAGRMIEAEEVFRS-MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 470
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+P L +Y + I G+ + +E ++ +EM
Sbjct: 471 IKPDLILYGSIIWGHCSQRKLEETKLILEEM 501
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 158/352 (44%), Gaps = 28/352 (7%)
Query: 147 LVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
L+ R G P F + LI + N+ + ++ ++ G+ + + T AL+
Sbjct: 357 LLXDMRRTGLLPNEFTYTSLIDANCKAGNLTE---AWKLLNDMLQAGVKLNIVTYTALLD 413
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ + +I E++R + KD + PN + AL+ G+ + E
Sbjct: 414 GLCKAGRMIEAEEVFRSML-----------KD-----GISPNQQVYTALVHGYIKAERME 457
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ +M +PD Y ++ C +R++ E + + EEM+ + + + V TII
Sbjct: 458 DAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTII 517
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
+ + G+ + A FF+EM GVE++ VT+ L++G C AG V+ A+ + M G +
Sbjct: 518 DAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQ 577
Query: 385 PEGSTIEVLIGELCDKRRVFEA---LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
P + LI LC + A D ++ R G+ P ++ LI G + G ++E
Sbjct: 578 PNVAVYTSLIDGLCXNNCIESAKKLFDEMQCR----GMTPDITAFTALIDGNLKHGNLQE 633
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
AL + + M E L +Y++ + G+ + G + A EM E + E+
Sbjct: 634 ALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEE 685
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 153/374 (40%), Gaps = 49/374 (13%)
Query: 61 LLSLCRSGLTPTQFSQIALGLKN----NPHLALRFFSFTQHKSLCKHSLSSYATIIHILS 116
L + R+GL P +F+ +L N N A + + + K ++ +Y ++ L
Sbjct: 358 LXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV-KLNIVTYTALLDGLC 416
Query: 117 RARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEK 176
+A + A +V R L+ + P +++ LV Y IK E+
Sbjct: 417 KAGRMIEAEEVFRSMLKDGIS-PNQQVYTALVHGY-------------IKA-------ER 455
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIW---------------EVSRGKGVISGYEIYRE 221
+E + I++ + + + ++IW E + +G+ + I
Sbjct: 456 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 515
Query: 222 VFGLDSDATAGIGKDVKRV------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
+ +D+ AG D V V + T+ L+ G G E D + M
Sbjct: 516 I--IDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLS 573
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
LG +P+ Y+ L+ C + A+KL++EM+ + + D+ A+ +I G + G +
Sbjct: 574 LGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQE 633
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A M +E + LV+G+ + G++ A +N+M KG PE L+
Sbjct: 634 ALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 693
Query: 396 ELCDKRRVFEALDI 409
E + ++ EA+++
Sbjct: 694 EYYKRGQLDEAIEL 707
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 217/445 (48%), Gaps = 23/445 (5%)
Query: 46 VSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSL 105
V++ H S W L S+ +GLTP + I L +K + L+ FF++ + ++ +L
Sbjct: 133 VNVAHSHLINSDWAKLNSM-STGLTPYRMKHIMLKIKKDHVLSFEFFNWVKAQNPNCQTL 191
Query: 106 SSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLI 165
+Y+ I+HIL++ A V++ L S D KLFE ++ +YR C S+P VFD L
Sbjct: 192 ETYSIILHILTKNHKFKSAESVLKGILGSGSIDHPSKLFEAILYSYRICDSSPCVFDSLF 251
Query: 166 KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI-WEVSRGKGVISGYEIYREVFG 224
K ++K K+ +D+ + G +V +CNA I +S +G I+ YRE+
Sbjct: 252 KTYAQMK---KLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIA-LTFYREM-- 305
Query: 225 LDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+ R+ PNV+T N +M F + G EK +V+ M +G P S
Sbjct: 306 --------------QRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITS 351
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+ L+A +C + + KL M V D V +NT+I GFC G++ A + F EM
Sbjct: 352 YNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMK 411
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
+ V +++T+ L+NGY + G+ + ++++M R G + + T LI LC + R
Sbjct: 412 ANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTK 471
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+A ++K + + L P ++ LI G C E A ++ M+ G P+ +
Sbjct: 472 KAAYLVK-ELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKML 530
Query: 465 IDGYMKEGNVEMATMLRKEMFENQV 489
I + K + + A + +EM E +
Sbjct: 531 ISTFCKNEDFDGAVEVVREMSERSI 555
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 1/215 (0%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C+ + L + + +++R A ++ +M+D V + N I + A
Sbjct: 240 CDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIAL 299
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
F+REM + + T ++ +C+ G ++ AI V+ M GF P ++ LI
Sbjct: 300 TFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGY 359
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C+K + + LK + K G+ P + ++ LI G C GK+ EA K+ +EM P+
Sbjct: 360 CNKGLLNSGMK-LKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPN 418
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
Y+ I+GY + GN EM L EM N ++ +
Sbjct: 419 TITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKAD 453
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 94/226 (41%), Gaps = 23/226 (10%)
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
WV+ C+ +YS+++ + + + + AE +++ G
Sbjct: 180 WVKAQNPNCQ-TLETYSIILHILTKNHKFKSAE-------------------SVLKGILG 219
Query: 330 IGEMARAEEFFREMGLSG--VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
G + + F + S +SS F+ L Y + + +AI V+ M GF P
Sbjct: 220 SGSIDHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRV 279
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+ I +R AL + + ++ + P + ++ C+ GK+E+A++V
Sbjct: 280 ESCNAYISASISLQRGDIALTFYR-EMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFK 338
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
M GF P++ Y+ I GY +G + L+ M +N VR +D
Sbjct: 339 RMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDD 384
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ ++ T+NAL++G EG +K + E+ R P+ ++S L+ C + A
Sbjct: 450 IKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAF 509
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L++ M + + +I FC+ + A E REM + S T L G
Sbjct: 510 QLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGL 569
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEG 387
+G + A+ + +M K PEG
Sbjct: 570 WLSGKEELALKLCKEMEMKHLMPEG 594
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 229/469 (48%), Gaps = 35/469 (7%)
Query: 18 PKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQI 77
P+ Q+ ST SS P+D L ++LL R+ + L+ S +TP S +
Sbjct: 4 PRLQIYRSLSTLSS--PTDAL--LAEKALTLL------KRYPYHLNSISSQITPELASYL 53
Query: 78 ALGLKNNPHLALRFFSFTQ-HKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPE 136
L +N+ L L+F +F + H+ H +HIL++ +L A+++ + +
Sbjct: 54 LLQTQNDRTLTLKFINFAKPHQFFNPHC---KCIALHILTKFKLYKTAQNLAQDLAENSV 110
Query: 137 NDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKV 196
++ F+ L TY C S+ VFDL++K C + IEK VD+ ++ G V
Sbjct: 111 DEKGNYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKL---NGFMPGV 167
Query: 197 STCNALIWEVSR-GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
+ NA++ + R K VI ++YRE+ +G V NV ++N L+
Sbjct: 168 LSYNAILDSIVRCRKPVIFAEKVYREMIA------SG----------VSLNVFSYNILIR 211
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
GF G E + EM R C P+ +Y+ ++ +C+ +R+ EA KL M + +E
Sbjct: 212 GFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEP 271
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
+++ YN +I G C +G + EM G VT+ LVNGYC+ G+ A++++
Sbjct: 272 NLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLH 331
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
++M R G P+ T LI +C + A++ V+ GL P +Y LI G +
Sbjct: 332 SEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVR-GLRPNGVTYTSLINGFSQ 390
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+G M+EA ++ EM+ GF P++ Y+A ++G+ G +E A L + M
Sbjct: 391 KGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGM 439
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 125/244 (51%), Gaps = 1/244 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ +L+ + G + + + +M G P+ +Y+ L+ F ++ M EA ++
Sbjct: 341 PDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRI 400
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W+EM +V YN ++ G C G M A R M G+ V++ ++ G+CR
Sbjct: 401 WDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCR 460
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
++D A + +M KG P+ T LI LC++RR+ EA D+ + + K L P E
Sbjct: 461 YQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNK-SLLPDEF 519
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C+EG + EAL + EM+ KGF P Y+ I+G K+ A L ++
Sbjct: 520 TYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKL 579
Query: 485 FENQ 488
F ++
Sbjct: 580 FYDE 583
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D V +RPN T+ +L+ GF ++G ++ +W EM R G P +Y+ L+ C
Sbjct: 367 DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVS 426
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
RM EA L M K + DVV+Y+TII GFC E+ RA + EM GV ++T+
Sbjct: 427 GRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITY 486
Query: 356 EHLV-----------------------------------NGYCRAGDVDSAILVYNDMCR 380
L+ NGYC+ GD++ A+ ++++M +
Sbjct: 487 SSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIK 546
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEA----LDILKARVVKFGLFPTE----------KSY 426
KGF P+ T VLI L + R EA L + + G+ KS
Sbjct: 547 KGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSV 606
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ LIKG C +G M EA +V M+ + +P+ +Y+ I G+ ++GNV A L KEM +
Sbjct: 607 VALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVD 666
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Query: 317 VVAYNTIIGGFCEIGE-MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
V++YN I+ + + AE+ +REM SGV + ++ L+ G+C AG+++ + +
Sbjct: 167 VLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFF 226
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
+M R P T +IG C +R+ EA +L++ ++ GL P +Y +I GLC
Sbjct: 227 EEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLE-GLEPNLLTYNMVINGLCR 285
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
G++EE V AEM KGF P Y+ ++GY K GN A +L EM N
Sbjct: 286 VGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRN 337
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 16/193 (8%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV------------- 291
P+ T+N L+ G ++ + + + +++ P+ +Y L+
Sbjct: 551 PDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALI 610
Query: 292 --FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
FC + M EA++++E M +N + + YN II G C G + +A + ++EM G
Sbjct: 611 KGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFI 670
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
+VT LV G + LV D+ R + + L+ ++ K +A+
Sbjct: 671 PHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALV-QINHKEGNIDAVFN 729
Query: 410 LKARVVKFGLFPT 422
L + K G P+
Sbjct: 730 LLTEMAKDGFLPS 742
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 214/452 (47%), Gaps = 25/452 (5%)
Query: 34 PSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFS 93
P Q + + V S L H S W+ L L + TP + + I L ++ + L+L FF+
Sbjct: 10 PKGQDLDFVNVVHSHLIH----SDWDKLNKL-STHFTPFRVNHILLKIQKDHVLSLEFFN 64
Query: 94 FTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRE 153
+ + +L +++ I+HIL++ A+ ++R L S D KLF+ L+ +YR
Sbjct: 65 SLKTLNPISLTLETHSIILHILTKKSKFKSAQSILRTLLASRSIDLPGKLFDTLLFSYRM 124
Query: 154 CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVI 213
C S+P VFD L K ++ K D+ + G V +CNA + + V
Sbjct: 125 CDSSPRVFDSLFKT---YAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVD 181
Query: 214 SGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
YRE+ R R+ PN +TFN ++ + G EK +V EM
Sbjct: 182 IALTFYREM----------------RRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREM 225
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
+G P+ SY+ L+A C + + A KL M +E +VV +N++I GFC+ G++
Sbjct: 226 ESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKL 285
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
A FF EM + V ++VT+ L+NGY + G+ + A VY +M R G + + T L
Sbjct: 286 HEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNAL 345
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
I LC + + +A ++K + K L P +Y LI G C + A ++ MV G
Sbjct: 346 ILGLCKEGKTKKAAFLVK-ELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSG 404
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
P+ + + ++K + E A + +MF
Sbjct: 405 CHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMF 436
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Query: 234 GKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
GK + ++R V+ ++ T+NAL++G +EG +K + E+ + P+ +YS L++
Sbjct: 324 GKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISG 383
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C + A +L++ M + + + F + + A +M + S
Sbjct: 384 QCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASD 443
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
S T + +G C+ G + A+ + ++M + PE
Sbjct: 444 SNTLLEIYDGLCQCGKENLAMKLCHEMEARRLIPE 478
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 214/444 (48%), Gaps = 27/444 (6%)
Query: 46 VSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSL 105
V+++ H S W+ L L GLT + I L + + L+L FF++ ++ H+L
Sbjct: 57 VNVVHSHLIHSDWSKLDCL-SMGLTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTL 115
Query: 106 SSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLI 165
++ I+HIL++ R A ++R + S D KLFE L+ +YR C S+P VFDLL
Sbjct: 116 ETHCIILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLF 175
Query: 166 KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV---SRGKGVISGYEIYREV 222
K +++K D + G V +CNA + + SRG ++ YRE+
Sbjct: 176 K---TFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALA---FYREM 229
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
R R+ PN +T N ++ + G +K V+ EM +G P+
Sbjct: 230 ----------------RRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNV 273
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
SY+ L+A +C + + A KL M V DVV +NT++ GFC++G++ A + F E
Sbjct: 274 ASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGE 333
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M + ++VT+ L+NGY +AG+ + ++ +M R + + T LI LC + +
Sbjct: 334 MKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGK 393
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+A +++ K GL P ++ LI G C + + E A ++ M+ F P + +
Sbjct: 394 TKKAAYLVRELDEK-GLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFR 452
Query: 463 AFIDGYMKEGNVEMATMLRKEMFE 486
+ + + + + A L +EM
Sbjct: 453 MLLSTFCENEDYDGAVQLLEEMLN 476
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 1/215 (0%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C+ + + +L F ++ R A + M+D V + N + A
Sbjct: 164 CDSSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIAL 223
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
F+REM S + +S T ++ C+ G +D A +V+ +M GF P ++ LI
Sbjct: 224 AFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGY 283
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C+K + A+ L++ + K G+ P ++ L+ G C+ GK++EA K+ EM G P+
Sbjct: 284 CNKGLLSSAMK-LRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPT 342
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
Y+ I+GY K GN EM L +EM QV+ +
Sbjct: 343 TVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKAD 377
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/513 (27%), Positives = 246/513 (47%), Gaps = 58/513 (11%)
Query: 13 VSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPT 72
++KP+P + FS+S + ++ S + + +LL H W L+ S P
Sbjct: 1 MAKPRPISHKAASFSSSQALTQNEDS---VREITTLLNSHN----WQALM---ESSDIPK 50
Query: 73 QF------SQIALGLKNNPHLALRFFSFTQHK---SLCKHSLSSYATIIHILSRARLIGP 123
+ S I +P L FF ++QHK S + L + + L + GP
Sbjct: 51 KLNTDIIRSVILQNQVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGP 110
Query: 124 ARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCV 181
A D+I+ +R+ +D L + +VK YR C +P +FD+L+ + K+ V
Sbjct: 111 ASDLIKCIIRN--SDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMD------SYRKMGFLV 162
Query: 182 DIVRMLMS-RGLSVKVS--TCNALIWEVSRGKGV---------ISGYEIYREVFGLDSDA 229
+ V + + + + S +CN+L+ ++ +G V + +++ +V+ +
Sbjct: 163 EAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMI 222
Query: 230 TA----GIGKDVKRVV------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
+A G KD KRV+ PN+ T+N ++ G R ++ ++ M G
Sbjct: 223 SAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLV 282
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD Y+Y +L+ FC E+R REA+ + EM D ++ + + YN +I GF G++ +A
Sbjct: 283 PDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRI 342
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC- 398
EM G+E++ + + L+NG C+AG ++ A+ + +M KG EP+ T +LI C
Sbjct: 343 KDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCR 402
Query: 399 --DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+ R FE LD +K R L PT +Y +I GLC G ++ + EMV G +P
Sbjct: 403 GQNMARAFELLDEMKKR----KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKP 458
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ +Y+ + + KEG VE + M+ + M E +
Sbjct: 459 NAVVYTTLMTAHAKEGRVEESRMILERMREQGI 491
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 135/248 (54%), Gaps = 2/248 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
RV +V T++ L+ G R G + ++ E+ G P+ ++Y+ L++ C++ + +A
Sbjct: 595 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKA 654
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L EEM K + D+V YN +I G C+ GE+ RA+ F ++ G+ + VT+ +V+G
Sbjct: 655 SQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDG 714
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC++ + +A + +M +G P+ V++ C + + +ALD+ + + K F
Sbjct: 715 YCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG--FA 772
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ S+ LI+G C+ GK++EA + EM+ K F P+ Y++ ID K G + A L
Sbjct: 773 STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLW 832
Query: 482 KEMFENQV 489
EM E V
Sbjct: 833 LEMQERNV 840
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 180/392 (45%), Gaps = 38/392 (9%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C +L +Y II L RARL+ A ++ R ++ P L +++L+ +
Sbjct: 246 CSPNLVTYNVIIGGLCRARLLDEAIELKR-SMVDKGLVPDLYTYDILINGF--------- 295
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
C+E ++ E ++++ + GL + T NALI R + + I
Sbjct: 296 -------CMEKRSREAKLMLLEMIDV----GLKPEPITYNALIDGFMRQGDIEQAFRI-- 342
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
KD + N+ +N L+ G + G EK ++ EM G EP
Sbjct: 343 --------------KDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEP 388
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D +YS+L+ C + M A +L +EM+ + + V+ Y+ II G C G +
Sbjct: 389 DSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAIL 448
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
REM ++G++ ++V + L+ + + G V+ + ++ M +G P+ LI C
Sbjct: 449 REMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKA 508
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+R+ EA L +++ L P +Y I G + G+ME A + EM+ G P++ I
Sbjct: 509 KRMEEARTYL-MEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGI 567
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
Y+A I+G+ KEGNV A + + + +V Q+
Sbjct: 568 YTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 599
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 150/324 (46%), Gaps = 20/324 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV------------- 222
K+E ++I++ +M +G+ T + LI RG+ + +E+ E+
Sbjct: 370 KMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYS 429
Query: 223 FGLDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
++ G + ++R ++PN + LM +EG E+ + M
Sbjct: 430 VIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ 489
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G PD + Y+ L+ FC+ +RM EA EM ++ + + Y I G+ + GEM A
Sbjct: 490 GILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIA 549
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ +F EM GV + + L+ G+C+ G+V A V+ + + + T VLI
Sbjct: 550 DRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHG 609
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
L ++ EA I + + + GL P +Y LI G C++G +++A ++ EM KG P
Sbjct: 610 LSRNGKMHEAFGIF-SELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINP 668
Query: 457 SLEIYSAFIDGYMKEGNVEMATML 480
+ Y+ IDG K G +E A L
Sbjct: 669 DIVTYNILIDGLCKAGEIERAKNL 692
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 134/282 (47%), Gaps = 37/282 (13%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP--------------------- 280
R+RPN HT+ A + G+ + G E + + EM G P
Sbjct: 525 RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEA 584
Query: 281 --------------DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
D +YSVL+ +M EA ++ E+++K + + YN++I G
Sbjct: 585 FSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISG 644
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
C+ G + +A + EM + G+ VT+ L++G C+AG+++ A +++D+ +G P
Sbjct: 645 SCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPN 704
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T ++ C + A +L+ +++ G+ P Y ++ C+E K E+AL +
Sbjct: 705 CVTYAAMVDGYCKSKNPTAAFQLLEEMLLR-GVPPDAFIYNVILNFCCKEEKFEKALDLF 763
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
EM+ KGF ++ ++ I+GY K G ++ A L +EM E Q
Sbjct: 764 QEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQ 804
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 113/236 (47%), Gaps = 1/236 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+FN L+ G+ + G ++ + EM P+ +Y+ L+ C+ M EA++LW EM
Sbjct: 776 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 835
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+++NV Y +++ G+ IG M+ F EM G+E +T+ +++ YCR G+V
Sbjct: 836 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNV 895
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A + +++ KG + + LI LC K FE L +L + + G +
Sbjct: 896 MEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLN-EIGESGFRLGLPTCSV 954
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ +G G M+EA +V MV G+ + +DG N E + L K+M
Sbjct: 955 IARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 149/342 (43%), Gaps = 54/342 (15%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDA---TAGIGKDV 237
+ R ++SR + V T + LI +SR + + I+ E+ GL +A + I
Sbjct: 587 VFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSC 646
Query: 238 KR--------------VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
K+ + + P++ T+N L+ G + G E+ ++++ ++ G P+C
Sbjct: 647 KQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCV 706
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+Y+ ++ +C+ + A +L EEM + V D YN I+ C+ + +A + F+EM
Sbjct: 707 TYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM 766
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G +S+V+F L+ GYC++G + A + +M K F P T LI C +
Sbjct: 767 LEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMM 825
Query: 404 FEA----------------------------------LDILKARVVKFGLFPTEKSYMFL 429
EA + L +V G+ P + +Y +
Sbjct: 826 GEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVM 885
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
I C EG + EA K++ E++ KG S+ Y A I K+
Sbjct: 886 IDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKK 927
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 33/266 (12%)
Query: 159 FVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKVS---------------TCNAL 202
F++++++ CC E EK E +D+ + ++ +G + VS N L
Sbjct: 741 FIYNVILNFCCKE----EKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHL 796
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV------RVRPNVHTFNALMVG 256
+ E+ K I + Y + +D + AG+ + KR+ V P T+ +L+ G
Sbjct: 797 LEEMIE-KQFIPNHVTYTSL--IDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHG 853
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
++ G +V ++ EM G EPD +Y V++ +C E + EA KL +E+ K +
Sbjct: 854 YHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMS 913
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
V AY+ +I C+ E + E+G SG T + G+ AG++D A V
Sbjct: 914 VAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLR 973
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRR 402
M + G+ ++ +G+L D +
Sbjct: 974 SMVKFGWVSNTTS----LGDLVDGNQ 995
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 5/186 (2%)
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE--SSSVTFEHLVNGYCRAG 366
R N + V ++ ++ + ++G + A F +G E S ++ L+ +
Sbjct: 137 RSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVF--LGPKNFEFRPSLLSCNSLLGDLLKGN 194
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
V+ V++ MC P+ T +I C V +A +L K G P +Y
Sbjct: 195 KVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEK-GCSPNLVTY 253
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+I GLC ++EA++++ MV KG P L Y I+G+ E A ++ EM +
Sbjct: 254 NVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMID 313
Query: 487 NQVRQE 492
++ E
Sbjct: 314 VGLKPE 319
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 223/473 (47%), Gaps = 50/473 (10%)
Query: 23 LSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLK 82
LS F++S PSD L ++ L H + +HL + TP S + L +
Sbjct: 12 LSTFTSS----PSDSL--LADKALTFLKRH--PYQLHHL----SANFTPEAASNLLLKSQ 59
Query: 83 NNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR-VALRSPENDPKL 141
NN L L+F ++ +L +HIL+R +L A+ + VA ++ +++
Sbjct: 60 NNQELILKFLTWANPHQF--FTLRCKCITLHILTRFKLYKTAQTLAEDVAAKTLDDEDAS 117
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKC----CLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
+F L +TY C S VFDL++K CL I+ + IV + + G V
Sbjct: 118 LVFRSLQETYDLCNSTSSVFDLVVKSYSRLCL-------IDKALSIVHLSQAHGFMPGVL 170
Query: 198 TCNALIWEVSRGKGVISGYE-IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVG 256
+ NA++ R K IS E +++E+ +V PNV T+N L+ G
Sbjct: 171 SYNAVLDATIRSKRNISFAENVFKEMLQ----------------SQVSPNVFTYNILIRG 214
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
F G + + M + GC P+ +Y+ L+ +C+ R++ + +L M K +E +
Sbjct: 215 FCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPN 274
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
+++YN +I G C G M EM G VT+ L+ GYC+ G+ A++++
Sbjct: 275 LISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 377 DMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+M R G P T LI +C + R E LD ++ R GL P E++Y L+ G
Sbjct: 335 EMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVR----GLCPNERTYTTLVDGF 390
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
++G M EA +V EM+ GF PS+ Y+A I+G+ G + A + ++M E
Sbjct: 391 SQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKE 443
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 200/443 (45%), Gaps = 49/443 (11%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVA---------------- 131
+L F S + LC + S + ++ SR LI A ++ ++
Sbjct: 117 SLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVL 176
Query: 132 ---LRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIK-CCLEVKNIEKIETCVDIVR 185
+RS N + E + K + +P F +++LI+ CL ++ +
Sbjct: 177 DATIRSKRN---ISFAENVFKEMLQSQVSPNVFTYNILIRGFCLA----GNLDVALRFFD 229
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATA------GIGKD- 236
+ +G V T N LI + + + G+E+ R + GL+ + + G+ ++
Sbjct: 230 RMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREG 289
Query: 237 -VKRVVRVRPNVH---------TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
+K + V ++ T+N L+ G+ +EG F + + EM R G P +Y+
Sbjct: 290 RMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYT 349
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L+ C+ M A + ++MR + + + Y T++ GF + G M A +EM +
Sbjct: 350 SLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDN 409
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G S VT+ L+NG+C AG + AI V DM KG P+ + ++ C V EA
Sbjct: 410 GFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEA 469
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L + K ++V G+ P +Y LI+G CE+ + +EA + EM+ G P Y+A I+
Sbjct: 470 LRV-KRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALIN 528
Query: 467 GYMKEGNVEMATMLRKEMFENQV 489
Y EG+++ A L EM E V
Sbjct: 529 AYCMEGDLQKAIQLHNEMVEKGV 551
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 207/479 (43%), Gaps = 66/479 (13%)
Query: 64 LCRSGLTPTQFSQIAL----GLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRAR 119
+ +S ++P F+ L L N +ALRFF + K C ++ +Y T+I + R
Sbjct: 196 MLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKG-CLPNVVTYNTLIDGYCKLR 254
Query: 120 LIGPARDVIR-VALRSPENDPKLKLFEVLVK------------------TYRECGSAPFV 160
I +++R +AL+ E P L + V++ R
Sbjct: 255 KIDDGFELLRSMALKGLE--PNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVT 312
Query: 161 FDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
++ LIK C E + + +++R GLS V T +LI + + + E
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLR----HGLSPSVITYTSLIHSMCKAGNMNRATEFL 368
Query: 220 RE--VFGL-----------DSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYRE 260
+ V GL D + G + RV++ P+V T+NAL+ G
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIA 428
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G V +M G PD SYS +++ FC + EA ++ +M K ++ D + Y
Sbjct: 429 GKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITY 488
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
+++I GFCE A + F EM G+ T+ L+N YC GD+ AI ++N+M
Sbjct: 489 SSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVE 548
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE---------------KS 425
KG P+ T VLI L + R EA +L + + P++ KS
Sbjct: 549 KGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESV-PSDVTYHTLIENCSNIEFKS 607
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ LIKG C +G M EA +V M+ K +P Y+ I G+ + G++ A L KEM
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEM 666
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 184/433 (42%), Gaps = 66/433 (15%)
Query: 93 SFTQHKSLCKHSLS----SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
+ H + +H LS +Y ++IH + +A + A + + +R P + + LV
Sbjct: 329 ALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLD-QMRVRGLCPNERTYTTLV 387
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI----- 203
+ + G + +++ ++ G S V T NALI
Sbjct: 388 DGFSQKGY--------------------MNEAYRVLKEMIDNGFSPSVVTYNALINGHCI 427
Query: 204 ----------WEVSRGKGVISGYEIYREV---FGLDSDATAGIGKDVKRVVR-VRPNVHT 249
E + KG+ Y V F D + K V + ++P+ T
Sbjct: 428 AGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTIT 487
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+++L+ GF + ++ D++ EM R+G PD ++Y+ L+ +C E +++A +L EM
Sbjct: 488 YSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMV 547
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEE--------FFREMGLSGV-------ESSSVT 354
+K V DVV Y+ +I G + + AR E F+ E S V S++
Sbjct: 548 EKGVLPDVVTYSVLING---LNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE 604
Query: 355 FE---HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
F+ L+ G+C G + A V+ M K +P+G+ V+I C + +A + K
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYK 664
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+VK G + + L+K L +EGK+ E V A ++ E ++ +E
Sbjct: 665 -EMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHRE 723
Query: 472 GNVEMATMLRKEM 484
GN+++ + EM
Sbjct: 724 GNMDVVLDVLAEM 736
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 82/234 (35%), Gaps = 85/234 (36%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL------------ 288
V + P+ T+ AL+ + EG +K + EM G PD +YSVL
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTRE 573
Query: 289 --------------------------------------MAVFCEERRMREAEKLWEEMRD 310
+ FC + M EA++++E M +
Sbjct: 574 AKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLE 633
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY-------- 362
KN + D AYN +I G C G++ +A ++EM SG +VT LV
Sbjct: 634 KNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNE 693
Query: 363 -----------C----------------RAGDVDSAILVYNDMCRKGFEPEGST 389
C R G++D + V +M + GF P G +
Sbjct: 694 LNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGKS 747
>gi|15236834|ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis thaliana]
gi|7269520|emb|CAB79523.1| putative protein [Arabidopsis thaliana]
gi|332659836|gb|AEE85236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659837|gb|AEE85237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 208/440 (47%), Gaps = 23/440 (5%)
Query: 46 VSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSL 105
V++ H +S W+ L L L + + L ++ + L+L FF++ + ++ HSL
Sbjct: 57 VNVAHSHLIQSDWDKLNKLS-DHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSL 115
Query: 106 SSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLI 165
++A ++H L++ R A ++R L + D K+F+ L+ +YREC S P VFD L
Sbjct: 116 ETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLF 175
Query: 166 KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVIS-GYEIYREVFG 224
K +K K D + G V +CNA + + G+G + YRE+
Sbjct: 176 KTFAHLK---KFRNATDTFMQMKDYGFLPTVESCNAYMSSL-LGQGRVDIALRFYREM-- 229
Query: 225 LDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
R ++ PN +T N +M G+ R G +K ++ +M RLG S
Sbjct: 230 --------------RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVS 275
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+ L+A CE+ + A KL M ++ +VV +NT+I GFC ++ A + F EM
Sbjct: 276 YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
V ++VT+ L+NGY + GD + A Y DM G + + T LI LC + +
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+A +K + K L P ++ LI G C + ++ M+ G P+ + ++
Sbjct: 396 KAAQFVK-ELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454
Query: 465 IDGYMKEGNVEMATMLRKEM 484
+ + + + + A+ + +EM
Sbjct: 455 VSAFCRNEDFDGASQVLREM 474
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 1/215 (0%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C+ + L F ++ R A + +M+D V + N + G + A
Sbjct: 164 CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIAL 223
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
F+REM + + T +++GYCR+G +D I + DM R GF + LI
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C+K + AL LK + K GL P ++ LI G C K++EA KV EM P+
Sbjct: 284 CEKGLLSSALK-LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
Y+ I+GY ++G+ EMA ++M N ++++
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+ + + + M+ GL V T N LI R + +++ E+
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM-------------- 334
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
+ V V PN T+N L+ G+ ++G E + +M G + D +Y+ L+ C++
Sbjct: 335 --KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQA 392
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ R+A + +E+ +N+ + ++ +I G C R E ++ M SG + TF
Sbjct: 393 KTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFN 452
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
LV+ +CR D D A V +M R+ + T+
Sbjct: 453 MLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVH 487
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 97/246 (39%), Gaps = 37/246 (15%)
Query: 98 KSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSA 157
KS + ++ ++ T+IH RA + A V +++ P + L+ Y + G
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFG-EMKAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 158 PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
F ++ G+ + T NALI+ + + +
Sbjct: 360 EMAFRF--------------------YEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ 399
Query: 218 IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
+E+ D + +V PN TF+AL++G ++ +++ M R G
Sbjct: 400 FVKEL-------------DKENLV---PNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C P+ ++++L++ FC A ++ EM +++ D + + G G+ +
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVK 503
Query: 338 EFFREM 343
+ +EM
Sbjct: 504 KLLQEM 509
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 226/464 (48%), Gaps = 37/464 (7%)
Query: 29 SSSTPPSDQSHNLIAT-VVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHL 87
S ST S S +L+A ++ L H + +HL + TP S + L +N+ L
Sbjct: 11 SLSTFASSPSDSLLADKALTFLKRH--PYQLHHL----SANFTPEAASNLLLKSQNDQAL 64
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR-VALRSPENDPKLKLFEV 146
L+F ++ +L +HIL++ +L A+ + VA ++ +++ +F+
Sbjct: 65 ILKFLNWANPHQF--FTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKS 122
Query: 147 LVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
L +TY C S VFDL++K + I+ + IV + + G V + NA++
Sbjct: 123 LQETYDLCYSTSSVFDLVVK---SYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDAT 179
Query: 207 SRGKGVISGYE-IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEK 265
R K IS E +++E+ L+S +V PNV T+N L+ GF G +
Sbjct: 180 IRSKRNISFAENVFKEM--LES--------------QVSPNVFTYNILIRGFCFAGNIDV 223
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
++ +M GC P+ +Y+ L+ +C+ R++ + KL M K +E ++++YN +I
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
G C G M EM G VT+ L+ GYC+ G+ A++++ +M R G P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 386 EGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
T LI +C + R E LD ++ R GL P E++Y L+ G ++G M EA
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVR----GLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+V EM GF PS+ Y+A I+G+ G +E A + ++M E
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 206/454 (45%), Gaps = 47/454 (10%)
Query: 76 QIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVA---- 131
+A ++ + +L F S + LC + S + ++ SR LI A ++ +A
Sbjct: 105 DVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHG 164
Query: 132 ---------------LRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNI 174
+RS N + E + K E +P F +++LI+ NI
Sbjct: 165 FMPGVLSYNAVLDATIRSKRN---ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNI 221
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATA- 231
+ T D + ++G V T N LI + + + G+++ R + GL+ + +
Sbjct: 222 DVALTLFDKME---TKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 232 -----GIGKD--VKRVVRVRPNVH---------TFNALMVGFYREGAFEKVEDVWVEMAR 275
G+ ++ +K V V ++ T+N L+ G+ +EG F + + EM R
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G P +Y+ L+ C+ M A + ++MR + + + Y T++ GF + G M
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A REM +G S VT+ L+NG+C G ++ AI V DM KG P+ + ++
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
C V EAL + K +V+ G+ P +Y LI+G CE+ + +EA + EM+ G
Sbjct: 459 GFCRSYDVDEALRV-KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
P Y+A I+ Y EG++E A L EM E V
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 154/332 (46%), Gaps = 35/332 (10%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE--VFGL-----------DSDATAGI 233
++ GL+ V T +LI + + + E + V GL D + G
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 234 GKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
+ RV+R P+V T+NAL+ G G E V +M G PD SYS
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
+++ FC + EA ++ EM +K ++ D + Y+++I GFCE A + + EM G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ T+ L+N YC GD++ A+ ++N+M KG P+ T VLI L + R EA
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 408 DILKARVVKFGLFPTE---------------KSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
+L + + P++ KS + LIKG C +G M EA +V M+GK
Sbjct: 576 RLLLKLFYEESV-PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK 634
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+P Y+ I G+ + G++ A L KEM
Sbjct: 635 NHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 178/448 (39%), Gaps = 93/448 (20%)
Query: 64 LCRSGLTPTQFSQIAL----GLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRAR 119
+ R GLTP+ + +L N + A+ F + + LC + +Y T++ S+
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE-RTYTTLVDGFSQKG 394
Query: 120 LIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIET 179
+ A V+R + P + + L+ + G K+E
Sbjct: 395 YMNEAYRVLR-EMNDNGFSPSVVTYNALINGHCVTG--------------------KMED 433
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
+ ++ + +GLS V + + ++ R V + RE+ + K +K
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM----------VEKGIK- 482
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
P+ T+++L+ GF + ++ D++ EM R+G PD ++Y+ L+ +C E +
Sbjct: 483 -----PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGG--------------------------------- 326
+A +L EM +K V DVV Y+ +I G
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 327 -----------------FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
FC G M A++ F M + + +++G+CRAGD+
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A +Y +M + GF T+ L+ L + +V E L+ + V++ + L
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE-LNSVIVHVLRSCELSEAEQAKVL 716
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPS 457
++ EG M+ L V AEM GF P+
Sbjct: 717 VEINHREGNMDVVLDVLAEMAKDGFLPN 744
>gi|297803426|ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315433|gb|EFH45856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 538
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 203/439 (46%), Gaps = 21/439 (4%)
Query: 46 VSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSL 105
V++ H +S W+ L L L + + L ++ + L+ FF++ + ++ HSL
Sbjct: 57 VNVAHSHLIQSDWDKLNKLS-DHLDSFRVKNVLLKIQKDYLLSFEFFNWAKTRNPASHSL 115
Query: 106 SSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLI 165
++A ++H L++ R A ++R L + D K+F+ L+ +YREC S P VFD L
Sbjct: 116 ETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLF 175
Query: 166 KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGL 225
K +K K D + G V +CNA + + V YRE+
Sbjct: 176 KTFAHLK---KFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM--- 229
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
R ++ PN +T N +M G+ R G +K ++ +M RLG SY
Sbjct: 230 -------------RRCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSY 276
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ L+A CE+ + A KL M ++ +VV +NT+I GFC ++ A + F EM
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKA 336
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
+ ++VT+ L+NGY + GD + A Y DM G + + T LI LC + + +
Sbjct: 337 LNLPPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNTLILGLCKQAKTRK 396
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
A +K + K L P ++ LI G C + ++ M+ G P+ + ++ I
Sbjct: 397 AAQFVK-ELDKENLVPNSSTFSALIMGQCVRRNADRGFELYKSMIRSGCHPNEQTFNILI 455
Query: 466 DGYMKEGNVEMATMLRKEM 484
+ K + + A + +EM
Sbjct: 456 SAFCKNEDFDGAAQVLREM 474
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C+ + L F ++ R A + +M+D V + N + G + A
Sbjct: 164 CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIAL 223
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
F+REM + ++ T +++GYCR+G +D I + DM R GF + LI
Sbjct: 224 RFYREMRRCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGH 283
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C+K + AL LK + K GL P ++ LI G C K++EA KV EM P+
Sbjct: 284 CEKGLLSSALK-LKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPN 342
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
Y+ I+GY ++G+ EMA ++M N ++++
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 242/511 (47%), Gaps = 72/511 (14%)
Query: 13 VSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPT 72
++KP+P + FS+S + ++ S + + +LL H W L+ S P
Sbjct: 10 MAKPRPISHKAASFSSSQALTQNEDS---VREITTLLNSHN----WQALM---ESSDIPK 59
Query: 73 QF------SQIALGLKNNPHLALRFFSFTQHK---SLCKHSLSSYATIIHILSRARLIGP 123
+ S I +P L FF ++QHK S + L + + L + GP
Sbjct: 60 KLNTDIIRSVILQNQVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGP 119
Query: 124 ARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCV 181
A D+I+ +R+ +D L + +VK YR C +P +FD+L+ + K+ V
Sbjct: 120 ASDLIKCIIRN--SDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMD------SYRKMGFLV 171
Query: 182 DIVRMLMS-RGLSVKVS--TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK 238
+ V + + + + S +CN+L+ ++ +G V E++ +VF D
Sbjct: 172 EAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKV----ELFWKVF------------DGM 215
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM---ARL--------------GCEPD 281
+V P+V+T+ ++ + G + + V +EM ARL G PD
Sbjct: 216 CAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPD 275
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
Y+Y +L+ FC E+R REA+ + EM D ++ + + YN +I GF G++ +A
Sbjct: 276 LYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKD 335
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC--- 398
EM G+E++ + + L+NG C+AG ++ A+ + +M KG EP+ T +LI C
Sbjct: 336 EMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQ 395
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ R FE LD +K R L PT +Y +I GLC G ++ + EMV G +P+
Sbjct: 396 NMARAFELLDEMKKR----KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNA 451
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+Y+ + + KEG VE + M+ + M E +
Sbjct: 452 VVYTTLMTAHAKEGRVEESRMILERMREQGI 482
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 135/248 (54%), Gaps = 2/248 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
RV +V T++ L+ G R G + ++ E+ G P+ ++Y+ L++ C++ + +A
Sbjct: 586 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKA 645
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L EEM K + D+V YN +I G C+ GE+ RA+ F ++ G+ + VT+ +V+G
Sbjct: 646 SQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDG 705
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC++ + +A + +M +G P+ V++ C + + +ALD+ + + K F
Sbjct: 706 YCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG--FA 763
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ S+ LI+G C+ GK++EA + EM+ K F P+ Y++ ID K G + A L
Sbjct: 764 STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLW 823
Query: 482 KEMFENQV 489
EM E V
Sbjct: 824 LEMQERNV 831
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 183/397 (46%), Gaps = 25/397 (6%)
Query: 100 LCKHS-LSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
+C H L T +++S +G +D RV L E L L ++ + G P
Sbjct: 215 MCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVP 274
Query: 159 --FVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISG 215
+ +D+LI C+E ++ E ++++ + GL + T NALI R +
Sbjct: 275 DLYTYDILINGFCMEKRSREAKLMLLEMIDV----GLKPEPITYNALIDGFMRQGDIEQA 330
Query: 216 YEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
+ I KD + N+ +N L+ G + G EK ++ EM
Sbjct: 331 FRI----------------KDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME 374
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G EPD +YS+L+ C + M A +L +EM+ + + V+ Y+ II G C G +
Sbjct: 375 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 434
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
REM ++G++ ++V + L+ + + G V+ + ++ M +G P+ LI
Sbjct: 435 TNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLII 494
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
C +R+ EA L +++ L P +Y I G + G+ME A + EM+ G
Sbjct: 495 GFCKAKRMEEARTYL-MEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVL 553
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
P++ IY+A I+G+ KEGNV A + + + +V Q+
Sbjct: 554 PNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 590
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 150/324 (46%), Gaps = 20/324 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV------------- 222
K+E ++I++ +M +G+ T + LI RG+ + +E+ E+
Sbjct: 361 KMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYS 420
Query: 223 FGLDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
++ G + ++R ++PN + LM +EG E+ + M
Sbjct: 421 VIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ 480
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G PD + Y+ L+ FC+ +RM EA EM ++ + + Y I G+ + GEM A
Sbjct: 481 GILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIA 540
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ +F EM GV + + L+ G+C+ G+V A V+ + + + T VLI
Sbjct: 541 DRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHG 600
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
L ++ EA I + + + GL P +Y LI G C++G +++A ++ EM KG P
Sbjct: 601 LSRNGKMHEAFGIF-SELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINP 659
Query: 457 SLEIYSAFIDGYMKEGNVEMATML 480
+ Y+ IDG K G +E A L
Sbjct: 660 DIVTYNILIDGLCKAGEIERAKNL 683
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 153/322 (47%), Gaps = 21/322 (6%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDA---TAGIGKDV 237
+ R ++SR + V T + LI +SR + + I+ E+ GL +A + I
Sbjct: 578 VFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSC 637
Query: 238 KR--------------VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
K+ + + P++ T+N L+ G + G E+ ++++ ++ G P+C
Sbjct: 638 KQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCV 697
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+Y+ ++ +C+ + A +L EEM + V D YN I+ C+ + +A + F+EM
Sbjct: 698 TYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM 757
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G +S+V+F L+ GYC++G + A + +M K F P T LI C +
Sbjct: 758 LEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMM 816
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
EA L + + + PT K+Y L+ G G M E + EMV KG EP Y
Sbjct: 817 GEA-KRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYV 875
Query: 464 FIDGYMKEGNVEMATMLRKEMF 485
ID Y +EGNV A L+ E+
Sbjct: 876 MIDAYCREGNVMEACKLKDEIL 897
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 134/282 (47%), Gaps = 37/282 (13%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP--------------------- 280
R+RPN HT+ A + G+ + G E + + EM G P
Sbjct: 516 RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEA 575
Query: 281 --------------DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
D +YSVL+ +M EA ++ E+++K + + YN++I G
Sbjct: 576 FSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISG 635
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
C+ G + +A + EM + G+ VT+ L++G C+AG+++ A +++D+ +G P
Sbjct: 636 SCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPN 695
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T ++ C + A +L+ +++ G+ P Y ++ C+E K E+AL +
Sbjct: 696 CVTYAAMVDGYCKSKNPTAAFQLLEEMLLR-GVPPDAFIYNVILNFCCKEEKFEKALDLF 754
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
EM+ KGF ++ ++ I+GY K G ++ A L +EM E Q
Sbjct: 755 QEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQ 795
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 144/330 (43%), Gaps = 25/330 (7%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
+++LI + IE+ + D + RGL+ T A++ + K + +++
Sbjct: 663 TYNILIDGLCKAGEIERAKNLFDDIE---GRGLTPNCVTYAAMVDGYCKSKNPTAAFQLL 719
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
E+ + V P+ +N ++ +E FEK D++ EM G
Sbjct: 720 EEML----------------LRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF- 762
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
S++ L+ +C+ +++EA L EEM +K + V Y ++I C+ G M A+
Sbjct: 763 ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRL 822
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+ EM V ++ T+ L++GY G++ ++ +M KG EP+ T V+I C
Sbjct: 823 WLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCR 882
Query: 400 KRRVFEALDI-----LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+ V EA + +K +K G + + +G G M+EA +V MV G+
Sbjct: 883 EGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGW 942
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ +DG N E + L K+M
Sbjct: 943 VSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 219/443 (49%), Gaps = 28/443 (6%)
Query: 55 KSRWN--HLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATII 112
+ RW+ ++SL S L P S++ + L + LALRFF + + + +H+ +Y ++
Sbjct: 80 EQRWDDFRIVSLFDSALAPIWASRVLVELCQDARLALRFFEWAKGRIGFQHTSEAYCILV 139
Query: 113 HILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVK 172
HIL AR A V++ + P +F++L T C VFD L +E+
Sbjct: 140 HILFCARFYSDANAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELG 199
Query: 173 NIEKIETCVDIVRMLMSRGLSV--KVSTCNALIWEVSR-GKGVISGYEIYREVFGLDSDA 229
+E+ C L R V K +CNAL+ +S+ G+G +S R+ F
Sbjct: 200 MLEEASEC-----FLKMRKFRVFPKPRSCNALLHRLSKVGRGDLS-----RKFF--KDMG 247
Query: 230 TAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
AGI + +V T+N ++ +EG E ++ +M G PD +Y+ L+
Sbjct: 248 AAGIKR----------SVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLI 297
Query: 290 AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
+ + E ++E+M+D + + DV+ YN +I FC+ M +A EF EM +G++
Sbjct: 298 DGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLK 357
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
+ VT+ ++ +C+ G + AI + DM R P T LI C + EAL +
Sbjct: 358 PNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKL 417
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
++ +++ G+ +Y L+ GLCEEG+M+EA +V M+ G P+ E Y+A + G++
Sbjct: 418 VE-EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFI 476
Query: 470 KEGNVEMATMLRKEMFENQVRQE 492
K +E A + KEM E ++ +
Sbjct: 477 KAKEMEYAKDILKEMKEKCIKPD 499
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 136/268 (50%), Gaps = 7/268 (2%)
Query: 225 LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+D++ AG + ++V ++ NV T+ AL+ G EG ++ E+V+ M G
Sbjct: 402 IDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGV 461
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P+ +Y+ L+ F + + M A+ + +EM++K ++ D++ Y TI+ G C + A+
Sbjct: 462 APNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKL 521
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
E+ SG+ +++V + L++ Y ++G A+ + +M G T LI LC
Sbjct: 522 LIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLC 581
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
V EA+ R+ + GL P Y L+ GLC+ E A K+ EM+ KG P
Sbjct: 582 KSGLVQEAMHHF-GRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDK 640
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFE 486
Y+A IDG MK GN++ A LR M E
Sbjct: 641 IAYTALIDGNMKHGNLQEALNLRDRMIE 668
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 137/279 (49%), Gaps = 36/279 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV T++ + F +EG ++ +V+M R+ P+ ++Y+ L+ C+ + EA
Sbjct: 356 LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEAL 415
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL EE+ ++ +VV Y ++ G CE G M AEE FR M +GV + T+ LV+G+
Sbjct: 416 KLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGF 475
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV------------------- 403
+A +++ A + +M K +P+ ++ LC++ R+
Sbjct: 476 IKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNA 535
Query: 404 ----------------FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
EAL +L+ ++ GL TE +Y LI GLC+ G ++EA+
Sbjct: 536 VIYTTLMDAYFKSGQATEALTLLE-EMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFG 594
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
M G +P++ +Y+A +DG K E+A L EM +
Sbjct: 595 RMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLD 633
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 7/266 (2%)
Query: 225 LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
LD G K+ + V R V PN T+ AL+ GF + E +D+ EM
Sbjct: 437 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 496
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+PD Y ++ C E R+ EA+ L E+++ + + V Y T++ + + G+ A
Sbjct: 497 KPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALT 556
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
EM G+ ++ VT+ L++G C++G V A+ + M G +P + L+ LC
Sbjct: 557 LLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLC 616
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
K FE L ++ G+ P + +Y LI G + G ++EAL ++ M+ G E L
Sbjct: 617 -KNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDL 675
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEM 484
Y+A I G G V+ A L EM
Sbjct: 676 HAYTALIWGLSHSGQVQKARNLLDEM 701
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 1/211 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ N + LM +++ G + + EM LG +Y L+ C+ ++EA
Sbjct: 531 INTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAM 590
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ M + ++ +V Y ++ G C+ A++ F EM G+ + + L++G
Sbjct: 591 HHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGN 650
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G++ A+ + + M G E + LI L +V +A ++L + K G+ P
Sbjct: 651 MKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGK-GVLPD 709
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
E YM LIK GK++EAL++Q EM +G
Sbjct: 710 EVVYMCLIKKYYALGKVDEALELQNEMAKRG 740
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ ++PNV + AL+ G + FE + ++ EM G PD +Y+ L+ + ++E
Sbjct: 599 IGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQE 658
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L + M + +E D+ AY +I G G++ +A EM GV V + L+
Sbjct: 659 ALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK 718
Query: 361 GYCRAGDVDSAILVYNDMCRKG 382
Y G VD A+ + N+M ++G
Sbjct: 719 KYYALGKVDEALELQNEMAKRG 740
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + AL+ G + G ++ ++ M +G E D ++Y+ L+ ++++A L
Sbjct: 638 PDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNL 697
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+EM K V D V Y +I + +G++ A E EM G+
Sbjct: 698 LDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 741
>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 521
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 217/445 (48%), Gaps = 33/445 (7%)
Query: 46 VSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSL 105
+++ H S+W L ++ LTP + I L L+N+ L+L+FF++ Q + H+L
Sbjct: 44 INIFHSHFIHSQWEKLTPFSKT-LTPFKIQHILLKLQNDAVLSLKFFNWVQTHNPNSHTL 102
Query: 106 SSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLI 165
+++ ++HIL++ R A+ + + + N LFE L+ +Y C S+P VFD L
Sbjct: 103 HTHSFLLHILTKNRNFKTAQSIFSKIITTNSN-----LFESLLHSYTLCNSSPLVFDTLF 157
Query: 166 KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWE---VSRGKGVISGYEIYREV 222
K ++ K+ D + G V +CNA + + R + V+S YR++
Sbjct: 158 K---TFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVS---FYRQM 211
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
R R+ PNV+T N ++ + + G K +V +M +G P+
Sbjct: 212 ----------------RRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNV 255
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKN-VEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
+++ L++ +C++ + A K+ + M KN V +VV +NT+I GFC+ G++ A F
Sbjct: 256 VTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFS 315
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM L+ V + VT+ L+NG+ +AG+ + I ++ +M R + + T LI LC +
Sbjct: 316 EMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEG 375
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ +A ++K + K L P ++ LI G C E A V MV GF P+ +
Sbjct: 376 KTKKAAYMVK-ELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTF 434
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFE 486
+ K + + A + ++M E
Sbjct: 435 RMLASAFCKNEDFDGAVQVLRDMLE 459
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 131/306 (42%), Gaps = 18/306 (5%)
Query: 204 WE-VSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNA---LMVGFYR 259
WE ++ ++ ++I + L +DA + K V PN HT + L+ +
Sbjct: 56 WEKLTPFSKTLTPFKIQHILLKLQNDAVLSL-KFFNWVQTHNPNSHTLHTHSFLLHILTK 114
Query: 260 EGAFEKVEDVWVEMARLG-------------CEPDCYSYSVLMAVFCEERRMREAEKLWE 306
F+ + ++ ++ C + L F ++R A +
Sbjct: 115 NRNFKTAQSIFSKIITTNSNLFESLLHSYTLCNSSPLVFDTLFKTFAHMNKLRNATDTFV 174
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+M++ V + N + + F+R+M + + + T +V+ YC+ G
Sbjct: 175 KMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLG 234
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
+++ A V M G P T LI CDK + AL + + K G+FP ++
Sbjct: 235 ELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTF 294
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI G C+EGK+ EA +V +EM P++ Y+ I+G+ + GN EM L +EM
Sbjct: 295 NTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMER 354
Query: 487 NQVRQE 492
N+V+ +
Sbjct: 355 NKVKAD 360
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 74/185 (40%), Gaps = 38/185 (20%)
Query: 216 YEIYREVFGLDSDATAGIG--KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
Y FG ++ GIG ++++R +V+ ++ T+N L++G +EG +K + E+
Sbjct: 329 YNTLINGFGQAGNSEMGIGLFEEMERN-KVKADILTYNGLILGLCKEGKTKKAAYMVKEL 387
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
+ P+ ++S L+A G C
Sbjct: 388 DKGNLVPNASTFSALIA-----------------------------------GQCVRNNS 412
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
RA +R M SG + TF L + +C+ D D A+ V DM + P+ S + +
Sbjct: 413 ERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEV 472
Query: 394 IGELC 398
LC
Sbjct: 473 YSGLC 477
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 203/409 (49%), Gaps = 22/409 (5%)
Query: 82 KNNPHLALRFF-SFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPK 140
+ N L RF S T + KHSL S++ +IHIL R+R + A+ VI +R +
Sbjct: 212 RENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRK-SGVSR 270
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
+++ E LV TY CGS P VFDLL++ ++ + + E C + R+L S+GL V ++ CN
Sbjct: 271 VEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLR--EGC-EAFRVLKSKGLCVSINACN 327
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
+L+ + + V +EIY+EV V+ V+V NV+T N ++ +
Sbjct: 328 SLLGGLVKVGWVDLAWEIYQEV--------------VRSGVQV--NVYTLNIMINALCKN 371
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
E + +M G PD +Y+ L+ +C + + EA +L + M K ++ V Y
Sbjct: 372 QKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTY 431
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
N II G C+ G+ RA+ EM G+ + T+ L+ CR ++ A ++++M
Sbjct: 432 NAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPS 491
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
+G P+ + LIG L + +AL + + GL P Y LI G C G M
Sbjct: 492 QGVVPDLVSFSALIGLLSKNGCLDQALKYFRD-MKNAGLAPDNVIYTILIGGFCRNGVMS 550
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EALKV+ EM+ +G + Y+ ++G KE + A L EM E V
Sbjct: 551 EALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 599
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 118/214 (55%), Gaps = 1/214 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+V T+N L+ GF + EKV ++W +M P+ SY +L+ +C + EA
Sbjct: 634 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 693
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+LW+EM +K E ++ NTI+ G+C G +A+EF M L G+ +T+ L+NG+
Sbjct: 694 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 753
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ ++D A + N M G P+ T V++ + R+ EA +++ ++++ G+ P
Sbjct: 754 IKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA-ELIMLKMIERGVNPD 812
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+Y LI G + ++EA +V EM+ +GF P
Sbjct: 813 RSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 846
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 131/247 (53%), Gaps = 1/247 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V T+N ++ G +E + ++++ EM G PD Y+++ L+ + ++ M +A L+
Sbjct: 567 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLF 626
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E M +N++ DVV YNT+I GFC+ EM + E + +M + + +++ L+NGYC
Sbjct: 627 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 686
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G V A ++++M KGFE T ++ C +A + L ++K G+ P +
Sbjct: 687 GCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK-GIVPDGIT 745
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI G +E M+ A + +M G P + Y+ ++G+ ++G ++ A ++ +M
Sbjct: 746 YNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMI 805
Query: 486 ENQVRQE 492
E V +
Sbjct: 806 ERGVNPD 812
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 130/251 (51%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ +TF L+ G+ ++G K ++ M + +PD +Y+ L+ FC+ M +
Sbjct: 599 VFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 658
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+LW +M + + + ++Y +I G+C +G ++ A + EM G E++ +T +V GY
Sbjct: 659 ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGY 718
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRAG+ A ++M KG P+G T LI + + A ++ ++ GL P
Sbjct: 719 CRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN-KMENSGLLPD 777
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y ++ G +G+M+EA + +M+ +G P Y++ I+G++ + N++ A +
Sbjct: 778 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 837
Query: 483 EMFENQVRQED 493
EM + +D
Sbjct: 838 EMLQRGFVPDD 848
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 145/318 (45%), Gaps = 22/318 (6%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE---------------VFGLDS---- 227
++ G+S +T N L+ E R ++ I+ E + GL S
Sbjct: 454 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 513
Query: 228 -DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
D +D+K NV + L+ GF R G + V EM GC D +Y+
Sbjct: 514 LDQALKYFRDMKNAGLAPDNV-IYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYN 572
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ C+E+ + EA++L+ EM ++ V D + T+I G+ + G M +A F M
Sbjct: 573 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQR 632
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
++ VT+ L++G+C+ +++ ++NDM + P + +LI C+ V EA
Sbjct: 633 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEA 692
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ V K G T + ++KG C G +A + + M+ KG P Y+ I+
Sbjct: 693 FRLWDEMVEK-GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 751
Query: 467 GYMKEGNVEMATMLRKEM 484
G++KE N++ A L +M
Sbjct: 752 GFIKEENMDRAFALVNKM 769
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 210/454 (46%), Gaps = 29/454 (6%)
Query: 52 HRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATI 111
H S W LL L S LTP + + L L+N+ +L+ ++ + H+L +++ +
Sbjct: 51 HVINSHWEKLLPLSTS-LTPFRLKHLLLALQNDHVSSLKLSTWVLKHNPSSHTLDTHSIL 109
Query: 112 IHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSA-PFVFDLLIKCCLE 170
+H LS+ R + + L S P LF+ L+ +YR C S+ P VFD L K
Sbjct: 110 LHTLSKHRQFKTTQKFLTQTLSS---HPPHTLFDALLFSYRLCNSSSPLVFDSLFK---T 163
Query: 171 VKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV-------- 222
+ + K I ++ G S V +CNA + + R + YRE+
Sbjct: 164 LAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSP 223
Query: 223 -----------FGLDSDATAGIGKDVKRV-VRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
+ + + G K + + + PNV +FN L+ G+ +G F V
Sbjct: 224 NVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVK 283
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
M G +P+ +++ L+ FC+ER++ EA +++ EM+ NV+ VV YNT++ G+ ++
Sbjct: 284 SLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQV 343
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G+ + EM +G+++ +T+ L+ G C+ G A ++ ++ P ST
Sbjct: 344 GDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTF 403
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
LI C + A I ++ +V+ G P +++ LI C+ + A++V +M+
Sbjct: 404 SALITGQCVRNNSERAFLIYRS-MVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDML 462
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G+ P L S DG + G ++A L EM
Sbjct: 463 GRLMSPDLSTMSELCDGLCRCGKNQLALALCSEM 496
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 2/209 (0%)
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
+ L + R A ++ M++ V + N + + A F+RE+
Sbjct: 157 FDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIR 216
Query: 345 LSGVESSSV-TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
S +V T ++ YC G+V + M G P + LI C+K
Sbjct: 217 RRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLF 276
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
AL + K+ +V+ G+ P ++ LI G C+E K+ EA +V EM +PS+ Y+
Sbjct: 277 GLALKV-KSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNT 335
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQVRQE 492
++GY + G+ EM + +EM N ++ +
Sbjct: 336 LLNGYGQVGDSEMGVRVYEEMMRNGLKAD 364
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 203/409 (49%), Gaps = 22/409 (5%)
Query: 82 KNNPHLALRFF-SFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPK 140
+ N L RF S T + KHSL S++ +IHIL R+R + A+ VI +R +
Sbjct: 108 RENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRK-SGVSR 166
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
+++ E LV TY CGS P VFDLL++ ++ + + E C + R+L S+GL V ++ CN
Sbjct: 167 VEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLR--EGC-EAFRVLKSKGLCVSINACN 223
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
+L+ + + V +EIY+EV V+ V+V NV+T N ++ +
Sbjct: 224 SLLGGLVKVGWVDLAWEIYQEV--------------VRSGVQV--NVYTLNIMINALCKN 267
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
E + +M G PD +Y+ L+ +C + + EA +L + M K ++ V Y
Sbjct: 268 QKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTY 327
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
N II G C+ G+ RA+ EM G+ + T+ L+ CR ++ A ++++M
Sbjct: 328 NAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPS 387
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
+G P+ + LIG L + +AL + + GL P Y LI G C G M
Sbjct: 388 QGVVPDLVSFSALIGLLSKNGCLDQALKYFRD-MKNAGLAPDNVIYTILIGGFCRNGVMS 446
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EALKV+ EM+ +G + Y+ ++G KE + A L EM E V
Sbjct: 447 EALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 495
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 118/215 (54%), Gaps = 1/215 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++P+V T+N L+ GF + EKV ++W +M P+ SY +L+ +C + EA
Sbjct: 529 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEA 588
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+LW+EM +K E ++ NTI+ G+C G +A+EF M L G+ +T+ L+NG
Sbjct: 589 FRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING 648
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ + ++D A + N M G P+ T V++ + R+ EA +++ ++++ G+ P
Sbjct: 649 FIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA-ELIMLKMIERGVNP 707
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+Y LI G + ++EA +V EM+ +GF P
Sbjct: 708 DRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 742
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 131/247 (53%), Gaps = 1/247 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V T+N ++ G +E + ++++ EM G PD Y+++ L+ + ++ M +A L+
Sbjct: 463 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 522
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E M +N++ DVV YNT+I GFC+ EM + E + +M + + +++ L+NGYC
Sbjct: 523 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 582
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G V A ++++M KGFE T ++ C +A + L ++K G+ P +
Sbjct: 583 GCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK-GIVPDGIT 641
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI G +E M+ A + +M G P + Y+ ++G+ ++G ++ A ++ +M
Sbjct: 642 YNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMI 701
Query: 486 ENQVRQE 492
E V +
Sbjct: 702 ERGVNPD 708
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 130/251 (51%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ +TF L+ G+ ++G K ++ M + +PD +Y+ L+ FC+ M +
Sbjct: 495 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 554
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+LW +M + + + ++Y +I G+C +G ++ A + EM G E++ +T +V GY
Sbjct: 555 ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGY 614
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRAG+ A ++M KG P+G T LI + + A ++ ++ GL P
Sbjct: 615 CRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN-KMENSGLLPD 673
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y ++ G +G+M+EA + +M+ +G P Y++ I+G++ + N++ A +
Sbjct: 674 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 733
Query: 483 EMFENQVRQED 493
EM + +D
Sbjct: 734 EMLQRGFVPDD 744
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 146/318 (45%), Gaps = 22/318 (6%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE---------------VFGLDS---- 227
++ G+S +T N L+ E R ++ I+ E + GL S
Sbjct: 350 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 409
Query: 228 -DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
D +D+K + P+ + L+ GF R G + V EM GC D +Y+
Sbjct: 410 LDQALKYFRDMKNA-GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYN 468
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ C+E+ + EA++L+ EM ++ V D + T+I G+ + G M +A F M
Sbjct: 469 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR 528
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
++ VT+ L++G+C+ +++ ++NDM + P + +LI C+ V EA
Sbjct: 529 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEA 588
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ V K G T + ++KG C G +A + + M+ KG P Y+ I+
Sbjct: 589 FRLWDEMVEK-GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 647
Query: 467 GYMKEGNVEMATMLRKEM 484
G++KE N++ A L +M
Sbjct: 648 GFIKEENMDRAFALVNKM 665
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 148/568 (26%), Positives = 241/568 (42%), Gaps = 107/568 (18%)
Query: 16 PKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHH-----RSKSRWNHLLSLCRSGLT 70
PK L FS+ S +S + S LT H S+W H + S LT
Sbjct: 7 PKLSSLKLKPFSSISLQKTPLESPVSTTNLASPLTPHFLEQSARSSQW-HFIKQVESSLT 65
Query: 71 PTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATI---IHILSRARLIGPARDV 127
P+ SQ L L +P + L F + HK LS T+ I I++R PA +
Sbjct: 66 PSLISQTLLNLHESPQVVLDFLNHFHHK------LSDARTLCLAIVIVARLPSPKPALHL 119
Query: 128 IRVALRSPENDPKLKLFEVLVKTYRECG-SAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
++ AL + ++FE L + G + VFD LIK C ++ ++ C ++
Sbjct: 120 LKQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMK- 178
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA-------------GI 233
+G+ + TCN+L+ + + + +Y E+F L ++ G
Sbjct: 179 --EKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236
Query: 234 GKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
K K V V+PN+ T+N ++ G+ G E + + M R EPD ++Y
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM---G 344
L++ C++ R+ EA K++EEM K + V YNT+I GFC G + A + EM G
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356
Query: 345 LS--------------------------------GVESSSVTFEHLVNGYCRAGDVDSAI 372
+S G+ ++T+ L+NGYCR + A
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK--------ARVVKF------- 417
L++++M G +P T L+ L K R+ EA D+ K V+ F
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGH 476
Query: 418 -------GLF------------PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
G F P E ++ +++G C EGK+EEA ++ EM +G +P
Sbjct: 477 CSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDH 536
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFE 486
++ I GY + G+++ A +R EM +
Sbjct: 537 ISFNTLISGYSRRGDIKDAFRVRNEMLD 564
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 119/228 (52%), Gaps = 1/228 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+N L+ G+ R +K + EM G +P +Y+ L+ V ++ RM+EA+
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++++ + V DV+ +N +I G C + A E ++M V VTF ++ G+
Sbjct: 452 DLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G V+ A ++++M R+G +P+ + LI + + +A + + ++ G PT
Sbjct: 512 CREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV-RNEMLDTGFNPT 570
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+Y L++GLC+ + + A ++ EMV KG P Y I+G K
Sbjct: 571 VLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 36/286 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RP+ +N L+ GF +G + EM + G P +Y+ L+ E+R EAE
Sbjct: 322 LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAE 381
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGE------------------------------ 332
+ +E+++K + D + YN +I G+C
Sbjct: 382 CMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVL 441
Query: 333 -----MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
M A++ F+++ GV + F L++G+C +V A + DM R P+
Sbjct: 442 SKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDE 501
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T ++ C + +V EA ++ + + G+ P S+ LI G G +++A +V+
Sbjct: 502 VTFNTIMQGHCREGKVEEARELFD-EMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRN 560
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
EM+ GF P++ Y+A + G K ++A L KEM + +D
Sbjct: 561 EMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDD 606
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 115/225 (51%), Gaps = 1/225 (0%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
+ + M G P + + L+++F + R A L+ EM ++ V +N +I
Sbjct: 172 ECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVL 231
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ G++ +A++F M SGV+ + VT+ +V+GYC +G V++A + M R+ EP+
Sbjct: 232 CKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDS 291
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI +C + R+ EA I + V K GL P+ Y LI G C +G ++ A +
Sbjct: 292 FTYGSLISGMCKQGRLEEASKIFEEMVQK-GLRPSAVIYNTLIDGFCNKGNLDMASAYKD 350
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
EM+ KG P++ Y++ I E + A + KE+ E + +
Sbjct: 351 EMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 32/281 (11%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
++S+Y ++IH L + A +I+ ++ P + +L+ Y C +A F L
Sbjct: 360 TMSTYNSLIHALFMEQRTDEAECMIK-EIQEKGISPDAITYNILINGYCRCANAKKAFLL 418
Query: 164 LIKCCLE-VKNIEKIETCV--------------DIVRMLMSRGLSVKVSTCNALIWEVSR 208
+ +K +K T + D+ + + S G+ V NALI
Sbjct: 419 HDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCS 478
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVED 268
V +E+ KD+ R+ +V P+ TFN +M G REG E+ +
Sbjct: 479 NSNVKGAFELL---------------KDMDRM-KVPPDEVTFNTIMQGHCREGKVEEARE 522
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
++ EM R G +PD S++ L++ + +++A ++ EM D V+ YN ++ G C
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ E AEE +EM G+ T+ L+ G + D
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPD 623
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
SS+ F++L+ C D A + M KG P T L+ R EA +L
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRT-EAAWVL 208
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
A + + + + ++ +I LC+EGK+++A M G +P++ Y+ + GY
Sbjct: 209 YAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCS 268
Query: 471 EGNVEMATMLRKEMFENQVRQE 492
G VE A + M ++ +
Sbjct: 269 SGRVEAADAILTTMKRQKIEPD 290
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 146/569 (25%), Positives = 240/569 (42%), Gaps = 109/569 (19%)
Query: 16 PKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHH-----RSKSRWNHLLSLCRSGLT 70
PK L FS+ S +S + S LT H S+W H + S LT
Sbjct: 7 PKLSSLKLKPFSSISLQQTPLESPVSTTNLASPLTPHFLEQSARSSQW-HFIKQVESSLT 65
Query: 71 PTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATI---IHILSRARLIGPARDV 127
P+ SQ L L +P + L F + HK LS T+ I I++R PA +
Sbjct: 66 PSLISQTLLNLHESPQVVLDFLNHFHHK------LSDARTLCLAIVIVARLPSPKPALHL 119
Query: 128 IRVALRSPENDPKLKLFEVLVKTYRECG-SAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
+R AL + ++FE L + G + VFD LIK C ++ ++ C ++
Sbjct: 120 LRQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMK- 178
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA-------------GI 233
+G+ + TCN+L+ + + + +Y E+F L ++ G
Sbjct: 179 --EKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236
Query: 234 GKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
K K V V+PN+ T+N ++ G+ G E + + M R EPD ++Y
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM---G 344
L++ C++ R+ EA K++EEM K + V YNT+I GFC G + A + EM G
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356
Query: 345 LS--------------------------------GVESSSVTFEHLVNGYCRAGDVDSAI 372
+S G+ ++T+ L+NGYCR + A
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT---------- 422
L++++M G +P T L+ L K R+ EA D+ K ++ G+ P
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFK-KITSEGVLPDAIMFNALIDG 475
Query: 423 -------------------------EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
E ++ +++G C EGK+EEA ++ EM +G +P
Sbjct: 476 HCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
++ I GY + G+++ A +R EM +
Sbjct: 536 HISFNTLISGYSRRGDIKDAFRVRNEMLD 564
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 127/286 (44%), Gaps = 36/286 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RP+ +N L+ GF +G + EM + G P +Y+ L+ E+R EAE
Sbjct: 322 LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAE 381
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGE------------------------------ 332
+ +E+++K + D + YN +I G+C
Sbjct: 382 CMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVL 441
Query: 333 -----MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
M A++ F+++ GV ++ F L++G+C +V A + DM R P+
Sbjct: 442 SKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDE 501
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T ++ C + +V EA ++ + + G+ P S+ LI G G +++A +V+
Sbjct: 502 VTFNTIMQGHCREGKVEEARELFD-EMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRN 560
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
EM+ GF P++ Y+A + G K ++A L KEM + +D
Sbjct: 561 EMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDD 606
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 118/228 (51%), Gaps = 1/228 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+N L+ G+ R +K + EM G +P +Y+ L+ V ++ RM+EA+
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++++ + V D + +N +I G C + A E ++M V VTF ++ G+
Sbjct: 452 DLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G V+ A ++++M R+G +P+ + LI + + +A + + ++ G PT
Sbjct: 512 CREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV-RNEMLDTGFNPT 570
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+Y L++GLC+ + + A ++ EMV KG P Y I+G K
Sbjct: 571 VLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 114/222 (51%), Gaps = 1/222 (0%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
+ + M G P + + L+++F + R A L+ EM ++ V +N +I
Sbjct: 172 ECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVL 231
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ G++ +A++F M SGV+ + VT+ +V+GYC +G V++A + M R+ EP+
Sbjct: 232 CKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDS 291
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI +C + R+ EA I + V K GL P+ Y LI G C +G ++ A +
Sbjct: 292 FTYGSLISGMCKQGRLEEASKIFEEMVQK-GLRPSAVIYNTLIDGFCNKGNLDMASAYKD 350
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EM+ KG P++ Y++ I E + A + KE+ E +
Sbjct: 351 EMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 121/281 (43%), Gaps = 32/281 (11%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
++S+Y ++IH L + A +I+ ++ P + +L+ Y C +A F L
Sbjct: 360 TMSTYNSLIHALFMEQRTDEAECMIK-EIQEKGISPDAITYNILINGYCRCANAKKAFLL 418
Query: 164 LIKCCLE-VKNIEKIETCV--------------DIVRMLMSRGLSVKVSTCNALIWEVSR 208
+ +K +K T + D+ + + S G+ NALI
Sbjct: 419 HDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCS 478
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVED 268
V +E+ KD+ R+ +V P+ TFN +M G REG E+ +
Sbjct: 479 NSNVKGAFELL---------------KDMDRM-KVPPDEVTFNTIMQGHCREGKVEEARE 522
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
++ EM R G +PD S++ L++ + +++A ++ EM D V+ YN ++ G C
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ E AEE +EM G+ T+ L+ G + D
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPD 623
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
SS+ F++L+ C D A + M KG P T L+ R EA +L
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRT-EAAWVL 208
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
A + + + + ++ +I LC+EGK+++A M G +P++ Y+ + GY
Sbjct: 209 YAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCS 268
Query: 471 EGNVEMATMLRKEMFENQVRQE 492
G VE A + M ++ +
Sbjct: 269 SGRVEAADAILTTMKRQKIEPD 290
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 229/485 (47%), Gaps = 38/485 (7%)
Query: 8 HIIFSVSKPKPKPQ----------LLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSR 57
H+ F S P P LL+ F P QS L + + + +
Sbjct: 20 HLPFVFSSPSLVPSHGSLSYCPLMLLTGFLCILRFPFITQSSFLGQLDKASIIKIIQQDQ 79
Query: 58 WNH--LLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHIL 115
WN + S L P S++ + LK +P LAL+FF + + K + SY ++HIL
Sbjct: 80 WNDPKFVRFIDSSLGPIWVSRVLVELKQDPKLALKFFRWAKTKFGFCLTTESYCLLVHIL 139
Query: 116 SRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIE 175
AR+ A ++ + S P +FEVL T C VFD L +E+ +E
Sbjct: 140 FYARMYFDANFFLKELISSRRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLE 199
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR-GKGVISGYEIYREVFGLDSDATAGIG 234
+ C RM R K +CNA ++ +++ GKG +S + +R++ G AGI
Sbjct: 200 EAGQCFS--RMTRFRVFP-KARSCNAFLYRLAKTGKGDLSN-KFFRDMVG------AGIA 249
Query: 235 KDVKRVVRVRPNVHTFNALMVGFY-REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
+ +V T+N +M+G+ +EG + ++ +M ++G PD +Y+ L+ +
Sbjct: 250 Q----------SVFTYN-IMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYG 298
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + E+ L+EEM+D E DV+ YN +I FC+ +M +A F EM SG++ + V
Sbjct: 299 KLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVV 358
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ L++ C+ + AI DM R G P T LI C + +AL +
Sbjct: 359 TYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEM 418
Query: 414 V-VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ V+ G +Y L+ GLC+EG+M EA + M+ G P+L+ Y+A + G++K
Sbjct: 419 LQVQVGF--NVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNK 476
Query: 473 NVEMA 477
VE A
Sbjct: 477 RVENA 481
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 135/269 (50%), Gaps = 8/269 (2%)
Query: 225 LDSDATAGIGKDVKRV------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+D++ AG D ++ V+V NV T+ L+ G +EG + ED++ M + G
Sbjct: 399 IDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGV 458
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P+ +Y+ L+ + +R+ A +L +E+++K ++ D++ Y TII G C ++ E
Sbjct: 459 TPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEF 518
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
EM G+ ++SV + ++ Y + G A+ + +MC G E T VLI LC
Sbjct: 519 VMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLC 578
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSY-MFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
K V EA+D AR+ F L P + LI GLC+ +E A K+ EM K P
Sbjct: 579 KKGLVEEAIDYF-ARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPD 637
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
Y+A IDG +K + + A +R M E
Sbjct: 638 KIAYTALIDGNLKHKDFQEALNIRSRMSE 666
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 133/278 (47%), Gaps = 37/278 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV T++ L+ +E ++ ++M R+G P+ ++Y+ L+ C+ + +A
Sbjct: 353 LKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDAL 412
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL +EM V +VV Y T++ G C+ G M AE+ FR M +GV + T+ LV+G+
Sbjct: 413 KLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGH 472
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV------------------- 403
+ V++A+ + ++ K +P+ +I LC + ++
Sbjct: 473 IKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANS 532
Query: 404 ----------------FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
EAL++L+ + G+ T ++ LI GLC++G +EEA+ A
Sbjct: 533 VIYTIRMDAYFKTGKTVEALNLLQ-EMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFA 591
Query: 448 EMVGKGFEP-SLEIYSAFIDGYMKEGNVEMATMLRKEM 484
M +P ++ + +A IDG K +E A L EM
Sbjct: 592 RMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEM 629
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 2/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN+ T+ AL+ G + E ++ E+ +PD Y ++ C + ++ E E
Sbjct: 458 VTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECE 517
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EM+ + + V Y + + + G+ A +EM GVE + VTF L++G
Sbjct: 518 FVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGL 577
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTI-EVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G V+ AI + M +P + LI LC K EA L + + P
Sbjct: 578 CKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLC-KNNYIEAAKKLFDEMQDKNMVP 636
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ +Y LI G + +EAL +++ M G E L Y++ + G + V+ A M
Sbjct: 637 DKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFL 696
Query: 482 KEM 484
EM
Sbjct: 697 NEM 699
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 116/243 (47%), Gaps = 2/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ + ++ G + E+ E V EM G + Y++ M + + + EA L
Sbjct: 495 PDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNL 554
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF-EHLVNGYC 363
+EM D VE +V + +I G C+ G + A ++F M ++ ++V L++G C
Sbjct: 555 LQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLC 614
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ +++A ++++M K P+ LI + EAL+I ++R+ + G+
Sbjct: 615 KNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNI-RSRMSELGMELDL 673
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ GL + +++A EM+GKG P + + Y + G+++ A L E
Sbjct: 674 HAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDE 733
Query: 484 MFE 486
+ +
Sbjct: 734 LLK 736
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 2/211 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+R N + M +++ G + ++ EM LG E ++ VL+ C++ + EA
Sbjct: 528 IRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAI 587
Query: 303 KLWEEMRDKNVEHDVVAYNT-IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ M D N++ + VA T +I G C+ + A++ F EM + + + L++G
Sbjct: 588 DYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDG 647
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ D A+ + + M G E + L+ L V +A L + K G+ P
Sbjct: 648 NLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGK-GIVP 706
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
E + L++ E G ++EA+++ E++ K
Sbjct: 707 DEILCIRLLRKYYELGSIDEAIELHDELLKK 737
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 209/464 (45%), Gaps = 58/464 (12%)
Query: 77 IALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPE 136
+ + +K + L L FF + + + +L S +IH+ ++ + A+ +I P+
Sbjct: 536 VLMKIKCDYRLVLDFFDWARSRR--DSNLESLCIVIHLAVASKDLKVAQSLISSFWERPK 593
Query: 137 ---NDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEV---------------------- 171
D ++ F++LV TY++ GS P VFD+ + ++
Sbjct: 594 LNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSV 653
Query: 172 -----------KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY- 219
K+ K T + + R G+ V++ N +I V + + + +
Sbjct: 654 DSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 713
Query: 220 -REVFGLDSDATA-----------GIGKDVKRVVRV------RPNVHTFNALMVGFYREG 261
E+ G D + G V +++ V +PN + + +++ R
Sbjct: 714 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 773
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ E+ + EM R G PD Y+ L+ FC+ +R A K + EM +++ DV+ Y
Sbjct: 774 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 833
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
II GFC+IG+M A + F EM G+E SVTF L+NGYC+AG + A V+N M +
Sbjct: 834 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 893
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G P T LI LC + + A ++L + K GL P +Y ++ GLC+ G +EE
Sbjct: 894 GCSPNVVTYTTLIDGLCKEGDLDSANELLH-EMWKIGLQPNIFTYNSIVNGLCKSGNIEE 952
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
A+K+ E G Y+ +D Y K G ++ A + KEM
Sbjct: 953 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 996
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 163/325 (50%), Gaps = 25/325 (7%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDAT-----------AGI 233
+ SR ++ V T A+I + ++ +++ E+F GL+ D+ AG
Sbjct: 820 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 879
Query: 234 GKDVKRV------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
KD RV PNV T+ L+ G +EG + ++ EM ++G +P+ ++Y+
Sbjct: 880 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 939
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
++ C+ + EA KL E + D V Y T++ +C+ GEM +A+E +EM G
Sbjct: 940 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 999
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
++ + VTF L+NG+C G ++ + N M KG P +T L+ + C + + A
Sbjct: 1000 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 1059
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
I K + G+ P K+Y L+KG C+ M+EA + EM GKGF S+ YS I G
Sbjct: 1060 AIYKDMCSR-GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 1118
Query: 468 YMKEGNVEMATMLRKEMFENQVRQE 492
++K A +E+F+ Q+R+E
Sbjct: 1119 FLKRKKFLEA----REVFD-QMRRE 1138
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 49/209 (23%)
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
DCY + + VF R E W +V +YN +I C++G + A
Sbjct: 666 DCYKTATAIIVF---REFPEVGVCW----------NVASYNIVIHFVCQLGRIKEAHHLL 712
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
M L G +++ +VNGYCR G++D
Sbjct: 713 LLMELKGYTPDVISYSTVVNGYCRFGELD------------------------------- 741
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+V++ ++++K + GL P Y +I LC K+ EA + +EM+ +G P +
Sbjct: 742 -KVWKLIEVMKRK----GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 796
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQV 489
Y+ IDG+ K G++ A+ EM +
Sbjct: 797 YTTLIDGFCKRGDIRAASKFFYEMHSRDI 825
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 228/474 (48%), Gaps = 68/474 (14%)
Query: 76 QIALGLKNNPHLALRFFSF-TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRS 134
Q+ + + HL L+F + H KHS S + ++H L R R + A+ I +R
Sbjct: 105 QVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRK 164
Query: 135 PENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSV 194
++K+ E L+ T GS ++DLL++ ++ K + + I+R +G+SV
Sbjct: 165 -SGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILR---RKGVSV 220
Query: 195 KVSTCNALI------------WEVS----------------------------------- 207
++ CN L+ WE+
Sbjct: 221 SINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFL 280
Query: 208 ---RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFY 258
GKGV + Y + +++ G+ ++ +++ + P + T+NA++ G
Sbjct: 281 SDMEGKGVFADIVTYNTL--INAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLC 338
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ G +++ +DV +EM +LG P+ +Y+ L+ C + EA+++++EM + V D+V
Sbjct: 339 KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLV 398
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+++++IG G + +A FREM SG+ +V + L++G+CR G + A+ + ++M
Sbjct: 399 SFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+G + T + LC K+++F D+L +V+ G+ P ++ LI+G C++G
Sbjct: 459 LARGCFMDVVTYNTFLNGLC-KKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGN 517
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
M++AL + MV +P Y+ IDG+ K G + A KE++++ +R++
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRA----KELWDDMIRKD 567
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 158/330 (47%), Gaps = 20/330 (6%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV----------- 222
I K + D++ ++ GL+ +T N L+ E+ R ++ EI+ E+
Sbjct: 340 IGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVS 399
Query: 223 FGLDSDATAGIGKDVKRVVRVR--------PNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
F A G + ++ R P+ + L+ GF R GA + EM
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML 459
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
GC D +Y+ + C+++ +A+ L+ EM ++ + D + T+I G+C+ G M
Sbjct: 460 ARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMD 519
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
+A F M + ++ VT+ L++G+C+AG++ A +++DM RK P+ + ++
Sbjct: 520 KALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVL 579
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
C + EAL++ + K G+ P + LIKG C G M +A + ++M+ G
Sbjct: 580 NGFCSSGLLPEALNLCDQMLEK-GIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGI 638
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P Y+ IDGY+KE N+E A +L EM
Sbjct: 639 IPDSFSYNTLIDGYLKEANLEKAFILINEM 668
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 134/252 (53%), Gaps = 7/252 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +TF L+ G+ ++G +K +++ M R +PD +Y+ L+ FC+ M A++L
Sbjct: 500 PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKEL 559
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W++M K++ D ++Y T++ GFC G + A +M G+ + VT L+ GYCR
Sbjct: 560 WDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCR 619
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI-GEL--CDKRRVFEALDILKARVVKFGLFP 421
+GD+ A + M G P+ + LI G L + + F ++ ++ R ++F +
Sbjct: 620 SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII- 678
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y ++ G C EGKM+EA +V +M+ G P YS+ I+G++ + N++ A
Sbjct: 679 ---TYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFH 735
Query: 482 KEMFENQVRQED 493
EM + + +D
Sbjct: 736 DEMLQRGLVPDD 747
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 131/241 (54%), Gaps = 1/241 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V T+N + G ++ F + ++ EM G PD Y+++ L+ +C++ M +A L+
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E M N++ D V YNT+I GFC+ GEM RA+E + +M + +++ ++NG+C +
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + A+ + + M KG P T LI C + +A + L ++++ G+ P S
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYL-SKMISNGIIPDSFS 644
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI G +E +E+A + EM +G + ++ Y+ ++G+ EG ++ A + ++M
Sbjct: 645 YNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMI 704
Query: 486 E 486
E
Sbjct: 705 E 705
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 120/214 (56%), Gaps = 1/214 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ T+N L+ GF + G + +++W +M R PD SY ++ FC + EA
Sbjct: 533 LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEAL 592
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L ++M +K + ++V NT+I G+C G+M +A E+ +M +G+ S ++ L++GY
Sbjct: 593 NLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGY 652
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ +++ A ++ N+M ++G + T +++ C + ++ EA +L+ ++++ G+ P
Sbjct: 653 LKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLR-KMIEIGINPD 711
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+Y LI G + M+EA + EM+ +G P
Sbjct: 712 GATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 78/144 (54%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RPN+ T N L+ G+ R G K + +M G PD +SY+ L+ + +E + +A
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EM + ++ +++ YN I+ GFC G+M AE+ R+M G+ T+ L+NG+
Sbjct: 663 ILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGH 722
Query: 363 CRAGDVDSAILVYNDMCRKGFEPE 386
++ A +++M ++G P+
Sbjct: 723 VSQDNMKEAFRFHDEMLQRGLVPD 746
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 218/464 (46%), Gaps = 44/464 (9%)
Query: 38 SHNLIA-TVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQ 96
+H+LIA ++ L H + L+ TP S + L +++ L F ++ Q
Sbjct: 11 NHSLIADKAIAFLKRHPQR------LASLSPHFTPQAASYVLLNSQSDQRTLLNFLTWAQ 64
Query: 97 HKSLCKHSLSS---YATIIHILSRARLIGPARDVIRVALRSPENDPK-LKLFEVLVKTYR 152
++ + + +HIL R +L A + L + DP LF L T+
Sbjct: 65 AQAQAHNFFFTPHCKCLALHILVRFKLYRTAHS-LAADLAATLPDPTGASLFRHLHDTFH 123
Query: 153 ECGSAPF----VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
C S+PF VFDL++K + + K T ++ + G + V + NA++ + R
Sbjct: 124 LC-SSPFSSSAVFDLVVKSLSRLGFVPKALT---LLHLANRHGFAPTVLSYNAVLDALLR 179
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGA 262
S + Y D +RV R V PNV+T+N ++ G +G
Sbjct: 180 RSS--SNHRDY---------------DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGD 222
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
EK +M + G P+ +Y+ L+ C++++++EA L M V ++++YN+
Sbjct: 223 LEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNS 282
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G C G M+ E EM G+ VT+ LVNG+C+ G++ +++ ++M KG
Sbjct: 283 VINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKG 342
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
P T LI +C + A++I V+ GL P E++Y LI G C++G M EA
Sbjct: 343 LSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVR-GLRPNERTYTTLIDGFCQKGLMNEA 401
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
KV +EM+ GF PS+ Y+A + GY G V+ A + + M E
Sbjct: 402 YKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVE 445
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 172/353 (48%), Gaps = 25/353 (7%)
Query: 155 GSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
G +P + ++++I+ + ++EK + +R + G+S V T N LI + K V
Sbjct: 202 GVSPNVYTYNVIIRGVVSQGDLEK---GLGFMRKMEKEGISPNVVTYNTLIDASCKKKKV 258
Query: 213 ISGYEIYRE--VFGLDSDATA---------GIGK--DVKRVVR------VRPNVHTFNAL 253
+ R V G+ ++ + G G+ +V +V + P+ T+N L
Sbjct: 259 KEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTL 318
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ GF +EG + + EM G P+ +Y+ L+ C+ + A +++++MR + +
Sbjct: 319 VNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGL 378
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
+ Y T+I GFC+ G M A + EM +SG S VT+ LV+GYC G V A+
Sbjct: 379 RPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVG 438
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ M +G P+ + +I C +R + +A +K +V+ G+ P +Y LI+GL
Sbjct: 439 ILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQ-MKEEMVEKGVLPDTVTYSSLIQGL 497
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
C + K+ EA + EM+ +G P Y++ I+ Y +G + A L EM +
Sbjct: 498 CLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQ 550
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 165/348 (47%), Gaps = 39/348 (11%)
Query: 155 GSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
G +P V + LI C + N+ + V+I + RGL T LI + KG+
Sbjct: 342 GLSPNVVTYTTLINCMCKAGNLSR---AVEIFDQMRVRGLRPNERTYTTLIDGFCQ-KGL 397
Query: 213 IS-GYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
++ Y++ E+ V P+V T+NAL+ G+ G ++ +
Sbjct: 398 MNEAYKVLSEMI----------------VSGFSPSVVTYNALVHGYCFLGRVQEAVGILR 441
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
M G PD SYS ++A FC ER + +A ++ EEM +K V D V Y+++I G C
Sbjct: 442 GMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQ 501
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
++ A + FREM G+ VT+ L+N YC G++ A+ ++++M ++GF P+ T
Sbjct: 502 KLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYS 561
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI---------------KGLCEE 436
VLI L K R A +L + + P + +Y LI KG C +
Sbjct: 562 VLINGLNKKARTKVAKRLLLKLFYEESV-PDDVTYNTLIENCSNNEFKSVEGLVKGFCMK 620
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G M EA +V M+ + +P+ IY+ I G+ + GNV A L E+
Sbjct: 621 GLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMEL 668
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 115/300 (38%), Gaps = 51/300 (17%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V +++ ++ GF RE K + EM G PD +YS L+ C ++++ EA L
Sbjct: 450 PDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDL 509
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM + + D V Y ++I +C GE+++A EM G +VT+ L+NG +
Sbjct: 510 FREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNK 569
Query: 365 AGDVDSAI---------------LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
A + YN + E ++E L+ C K + EA +
Sbjct: 570 KARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRV 629
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE-------------- 455
K +++ P Y +I G G + +A + E+ F
Sbjct: 630 FKT-MLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALA 688
Query: 456 ---------------------PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
++ ++ KEGN++ + EM ++ + + G
Sbjct: 689 REGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGG 748
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 109/275 (39%), Gaps = 38/275 (13%)
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
L+ CL+ K +E D+ R +M RGL T +LI
Sbjct: 493 LIQGLCLQQKLVEAF----DLFREMMRRGLPPDEVTYTSLI-----------------NA 531
Query: 223 FGLDSDATAGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
+ +D + + + + V R P+ T++ L+ G ++ + + + +++ PD
Sbjct: 532 YCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPD 591
Query: 282 CYSYSVLM---------------AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+Y+ L+ FC + M EA+++++ M +N + + YN +I G
Sbjct: 592 DVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHG 651
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
G + +A + E+ S +V LV R G D + ++ R +
Sbjct: 652 HSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLND 711
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+VL+ E+ K +A+ + + K GL P
Sbjct: 712 AKVAKVLV-EVNFKEGNMDAVLNVLTEMAKDGLLP 745
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 228/474 (48%), Gaps = 68/474 (14%)
Query: 76 QIALGLKNNPHLALRFFSF-TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRS 134
Q+ + + HL L+F + H KHS S + ++H L R R + A+ I +R
Sbjct: 105 QVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRK 164
Query: 135 PENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSV 194
++K+ E L+ T GS ++DLL++ ++ K + + I+R +G+SV
Sbjct: 165 -SGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILR---RKGVSV 220
Query: 195 KVSTCNALI------------WEVS----------------------------------- 207
++ CN L+ WE+
Sbjct: 221 SINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFL 280
Query: 208 ---RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFY 258
GKGV + Y + +++ G+ ++ +++ + P + T+NA++ G
Sbjct: 281 SDMEGKGVFADIVTYNTL--INAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLC 338
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ G +++ +DV +EM +LG P+ +Y+ L+ C + EA+++++EM + V D+V
Sbjct: 339 KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLV 398
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+++++IG G + +A FREM SG+ +V + L++G+CR G + A+ + ++M
Sbjct: 399 SFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+G + T + LC K+++F D+L +V+ G+ P ++ LI+G C++G
Sbjct: 459 LARGCFMDVVTYNTFLNGLC-KKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGN 517
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
M++AL + MV +P Y+ IDG+ K G + A KE++++ +R++
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRA----KELWDDMIRKD 567
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 158/330 (47%), Gaps = 20/330 (6%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV----------- 222
I K + D++ ++ GL+ +T N L+ E+ R ++ EI+ E+
Sbjct: 340 IGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVS 399
Query: 223 FGLDSDATAGIGKDVKRVVRVR--------PNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
F A G + ++ R P+ + L+ GF R GA + EM
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML 459
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
GC D +Y+ + C+++ +A+ L+ EM ++ + D + T+I G+C+ G M
Sbjct: 460 ARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMD 519
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
+A F M + ++ VT+ L++G+C+AG++ A +++DM RK P+ + ++
Sbjct: 520 KALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVL 579
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
C + EAL++ + K G+ P + LIKG C G M +A + ++M+ G
Sbjct: 580 NGFCSSGLLPEALNLCDQMLEK-GIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGI 638
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P Y+ IDGY+KE N+E A +L EM
Sbjct: 639 IPDSFSYNTLIDGYLKEANLEKAFILINEM 668
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 134/252 (53%), Gaps = 7/252 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +TF L+ G+ ++G +K +++ M R +PD +Y+ L+ FC+ M A++L
Sbjct: 500 PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKEL 559
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W++M K++ D ++Y T++ GFC G + A +M G+ + VT L+ GYCR
Sbjct: 560 WDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCR 619
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI-GEL--CDKRRVFEALDILKARVVKFGLFP 421
+GD+ A + M G P+ + LI G L + + F ++ ++ R ++F +
Sbjct: 620 SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII- 678
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y ++ G C EGKM+EA +V +M+ G P YS+ I+G++ + N++ A
Sbjct: 679 ---TYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFH 735
Query: 482 KEMFENQVRQED 493
EM + + +D
Sbjct: 736 DEMLQRGLVPDD 747
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 131/241 (54%), Gaps = 1/241 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V T+N + G ++ F + ++ EM G PD Y+++ L+ +C++ M +A L+
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E M N++ D V YNT+I GFC+ GEM RA+E + +M + +++ ++NG+C +
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + A+ + + M KG P T LI C + +A + L ++++ G+ P S
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYL-SKMISNGIIPDSFS 644
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI G +E +E+A + EM +G + ++ Y+ ++G+ EG ++ A + ++M
Sbjct: 645 YNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMI 704
Query: 486 E 486
E
Sbjct: 705 E 705
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 120/214 (56%), Gaps = 1/214 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ T+N L+ GF + G + +++W +M R PD SY ++ FC + EA
Sbjct: 533 LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEAL 592
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L ++M +K + ++V NT+I G+C G+M +A E+ +M +G+ S ++ L++GY
Sbjct: 593 NLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGY 652
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ +++ A ++ N+M ++G + T +++ C + ++ EA +L+ ++++ G+ P
Sbjct: 653 LKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLR-KMIEIGINPD 711
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+Y LI G + M+EA + EM+ +G P
Sbjct: 712 GATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 78/144 (54%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RPN+ T N L+ G+ R G K + +M G PD +SY+ L+ + +E + +A
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EM + ++ +++ YN I+ GFC G+M AE+ R+M G+ T+ L+NG+
Sbjct: 663 ILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGH 722
Query: 363 CRAGDVDSAILVYNDMCRKGFEPE 386
++ A +++M ++G P+
Sbjct: 723 VSQDNMKEAFRFHDEMLQRGLVPD 746
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 209/464 (45%), Gaps = 58/464 (12%)
Query: 77 IALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPE 136
+ + +K + L L FF + + + +L S +IH+ ++ + A+ +I P+
Sbjct: 93 VLMKIKCDYRLVLDFFDWARSRR--DSNLESLCIVIHLAVASKDLKVAQSLISSFWERPK 150
Query: 137 ---NDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEV---------------------- 171
D ++ F++LV TY++ GS P VFD+ + ++
Sbjct: 151 LNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSV 210
Query: 172 -----------KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY- 219
K+ K T + + R G+ V++ N +I V + + + +
Sbjct: 211 DSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 270
Query: 220 -REVFGLDSDATA-----------GIGKDVKRVVRV------RPNVHTFNALMVGFYREG 261
E+ G D + G V +++ V +PN + + +++ R
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ E+ + EM R G PD Y+ L+ FC+ +R A K + EM +++ DV+ Y
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
II GFC+IG+M A + F EM G+E SVTF L+NGYC+AG + A V+N M +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G P T LI LC + + A ++L + K GL P +Y ++ GLC+ G +EE
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLH-EMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
A+K+ E G Y+ +D Y K G ++ A + KEM
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 163/325 (50%), Gaps = 25/325 (7%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDAT-----------AGI 233
+ SR ++ V T A+I + ++ +++ E+F GL+ D+ AG
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 234 GKDVKRV------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
KD RV PNV T+ L+ G +EG + ++ EM ++G +P+ ++Y+
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
++ C+ + EA KL E + D V Y T++ +C+ GEM +A+E +EM G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
++ + VTF L+NG+C G ++ + N M KG P +T L+ + C + + A
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
I K + G+ P K+Y L+KG C+ M+EA + EM GKGF S+ YS I G
Sbjct: 617 AIYKDMCSR-GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 468 YMKEGNVEMATMLRKEMFENQVRQE 492
++K A +E+F+ Q+R+E
Sbjct: 676 FLKRKKFLEA----REVFD-QMRRE 695
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 93/229 (40%), Gaps = 51/229 (22%)
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G V+ V + RL DCY + + VF R E W +V +Y
Sbjct: 205 GLVLSVDSCNVYLTRL--SKDCYKTATAIIVF---REFPEVGVCW----------NVASY 249
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
N +I C++G + A M L G +++ +VNGYCR G++D
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD----------- 298
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
+V++ ++++K + GL P Y +I LC K+
Sbjct: 299 ---------------------KVWKLIEVMKRK----GLKPNSYIYGSIIGLLCRICKLA 333
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EA + +EM+ +G P +Y+ IDG+ K G++ A+ EM +
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 213/463 (46%), Gaps = 25/463 (5%)
Query: 25 QFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNN 84
F S P Q L+ + S+ R +L S + + +KN+
Sbjct: 49 NFPDYSPKKPIIQDSELVHRI-SIAIKQRRSEPLRRVLKPYESKFRADHLIWVLMNIKND 107
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL- 143
L L FF + + SL + + I + ++ + AR +I+ +P D +
Sbjct: 108 YRLVLSFFEWACLRR--DPSLEARCIVAQIATASKDLKMARKLIQDFWVNPNLDVGVSFG 165
Query: 144 --FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
E L+ TY++ GS P VFD+ + +E +++ D +++ GL + V +CN
Sbjct: 166 HFVEQLIYTYKDWGSDPRVFDIFFQVLVEAGMLDEARKLFD---KMLNYGLLISVDSCNL 222
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
I +S + G +I +VF + V V N ++N + + G
Sbjct: 223 FISHLSED---LDGIKIALKVFVEFPE------------VGVCWNTASYNIITHSLCQLG 267
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ + ++M GC PD SYS ++ +C+ ++ KL EEM+ K ++ + YN
Sbjct: 268 RVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYN 327
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
+I C+ G++A AE REM G+ V + L++G+C+ G+V SA ++++M ++
Sbjct: 328 GVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKR 387
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
P+ T +I LC RV EA + V K L P E +Y LI G C+EGKM+E
Sbjct: 388 KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK-RLEPDEVTYTALIDGYCKEGKMKE 446
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
A + +M+ G P++ Y+A DG K G V+ A L EM
Sbjct: 447 AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 489
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 204/442 (46%), Gaps = 44/442 (9%)
Query: 61 LLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSR-AR 119
L+S+ L + S+ G+K +AL+ F +C ++ +SY I H L + R
Sbjct: 214 LISVDSCNLFISHLSEDLDGIK----IALKVFVEFPEVGVCWNT-ASYNIITHSLCQLGR 268
Query: 120 LIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIE---- 175
++ + ++++ LR P + + ++ Y + G V L+ + +++K ++
Sbjct: 269 VVEAHQLLLQMELRGC--IPDVISYSTVINGYCQVGELQRVLKLIEE--MQIKGLKPNPY 324
Query: 176 -------------KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
K+ ++R ++S G++ LI + V S Y ++ E+
Sbjct: 325 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 384
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
KR ++ P+ T+ A++ G + G + + ++ EM EPD
Sbjct: 385 --------------QKR--KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE 428
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+Y+ L+ +C+E +M+EA L +M + ++V Y + G C+ GE+ A E E
Sbjct: 429 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 488
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G+E + T+ LVNG C+AG++D A+ + DM GF P+ T L+ C R
Sbjct: 489 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 548
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ A ++L+ +++ L PT ++ L+ G C G +E+ K+ M+ KG P+ Y+
Sbjct: 549 MVRAHELLR-QMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 607
Query: 463 AFIDGYMKEGNVEMATMLRKEM 484
+ I Y N+ T + + M
Sbjct: 608 SLIKQYCIRNNMRATTEIYRGM 629
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 128/248 (51%), Gaps = 6/248 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+ AL G + G + ++ EM R G E + Y+Y+ L+ C+ + +A KL
Sbjct: 461 PNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKL 520
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M D V Y T++ +C+ EM RA E R+M ++ + VTF L+NG+C
Sbjct: 521 MKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCM 580
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G ++ + M KG P +T LI + C + + +I + K G+ P
Sbjct: 581 SGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK-GVVPDGN 639
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LIKG C+ M+EA + +MVGKGF ++ Y+A I G+ K A +E+
Sbjct: 640 TYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEA----REL 695
Query: 485 FENQVRQE 492
FE Q+R+E
Sbjct: 696 FE-QMRRE 702
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 121/241 (50%), Gaps = 1/241 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N++T+N+L+ G + G ++ + +M G PD +Y+ LM +C+ R M A +L
Sbjct: 497 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 556
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M D+ ++ VV +N ++ GFC G + E+ + M G+ ++ T+ L+ YC
Sbjct: 557 RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIR 616
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
++ + +Y MC KG P+G+T +LI C R + EA L +V G T S
Sbjct: 617 NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW-FLHRDMVGKGFNLTVSS 675
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LIKG + K EA ++ +M +G EIY+ F D EG +E+ L E
Sbjct: 676 YNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAI 735
Query: 486 E 486
E
Sbjct: 736 E 736
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 36/189 (19%)
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A K++ E + V + +YN I C++G + A + +M L G +++ ++N
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVIN 296
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
GYC+ G++ + + +M KG +P T
Sbjct: 297 GYCQVGELQRVLKLIEEMQIKGLKPNPYT------------------------------- 325
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
Y +I LC+ GK+ EA +V EM+ +G P IY+ IDG+ K GNV A L
Sbjct: 326 -----YNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRL 380
Query: 481 RKEMFENQV 489
EM + ++
Sbjct: 381 FDEMQKRKI 389
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
+I R + ++G+ +T N LI + + + + ++R++ G + T
Sbjct: 623 TEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT---------- 672
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V ++NAL+ GFY+ F + +++ +M R G D Y++ + +E +M
Sbjct: 673 ------VSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMEL 726
Query: 301 AEKLWEEMRDKNVEHDVVAYNT 322
+L +E +K + D+ NT
Sbjct: 727 TLELCDEAIEKCLVGDIQTKNT 748
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 218/473 (46%), Gaps = 72/473 (15%)
Query: 59 NHLLSLCRSGLTPTQFSQIALGLKNNPHLALRF-----FSFTQHKSLCKHSLSSYATIIH 113
NHL+ L P ++ +N+ L RF F+F K H+ S + +IH
Sbjct: 61 NHLIRL-----NPLAVVEVLYRCRNDLSLGQRFVDQLGFNFPNFK----HTSLSLSAMIH 111
Query: 114 ILSRARLIGPARD-VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVK 172
IL R+ + A+ V+R+ RS + ++++ LV TY CGS VFDLLI+ ++ +
Sbjct: 112 ILVRSGRLSDAQSCVLRMIRRSGVS--RVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQAR 169
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
K+ + +L S+G +V + CNALI + R V + IY+E+ + +G
Sbjct: 170 ---KLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEI------SRSG 220
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+G NV+T N ++ ++G EKV E+ G PD +Y+ L++ +
Sbjct: 221 VG----------VNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAY 270
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
+ M EA +L M K V YNT+I G C+ G+ RA+E F EM SG+ S
Sbjct: 271 SSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 330
Query: 353 VTFEHLVNGYC-----------------------------------RAGDVDSAILVYND 377
T+ L+ C R+G++D A++ +N
Sbjct: 331 TTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 390
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
+ G P+ +LI C K + EA++ L+ +++ G +Y ++ GLC+
Sbjct: 391 VKEAGLIPDNVIYTILIQGYCRKGMISEAMN-LRNEMLQQGCAMDVVTYNTILHGLCKRK 449
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+ EA K+ EM +G P + IDG+ K GN++ A L K+M E +++
Sbjct: 450 MLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIK 502
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 1/244 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + L+ G+ R+G + ++ EM + GC D +Y+ ++ C+ + + EA+KL
Sbjct: 398 PDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 457
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM ++ + D +I G C++G + A E F++M ++ VT+ L++G+ +
Sbjct: 458 FNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGK 517
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GD+D+A ++ DM K P + +L+ LC K + EA + + K + PT
Sbjct: 518 VGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISK-SIKPTVM 576
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+IKG C G + +M+ +GF P Y+ I G++KE N+ A L K+M
Sbjct: 577 ICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKM 636
Query: 485 FENQ 488
E Q
Sbjct: 637 EEKQ 640
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 133/284 (46%), Gaps = 36/284 (12%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V T+N ++ G + + + ++ EM G PD Y+ ++L+ C+ ++ A +L+
Sbjct: 434 DVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELF 493
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN----- 360
++M++K ++ DVV YNT++ GF ++G++ A+E + +M + + ++F LVN
Sbjct: 494 KKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSK 553
Query: 361 ------------------------------GYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
GYCR+G+ + M +GF P+ +
Sbjct: 554 GHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISY 613
Query: 391 EVLIGELCDKRRVFEALDILKARVVK-FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
LI + + +A ++K K GL P +Y ++ G C E +M+EA V +M
Sbjct: 614 NTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKM 673
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+ +G P Y++ I+G++ + N+ A EM + +D
Sbjct: 674 IERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 214/442 (48%), Gaps = 28/442 (6%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI 128
L P ++ + LK +P LA +FF ++ ++ KHS+ SY + HIL AR+ A V+
Sbjct: 106 LAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVL 165
Query: 129 RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLM 188
+ + S + +F+VL T C VFD L +++ +E+ C ++
Sbjct: 166 KEMVLSKAD---CDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFR 222
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGL--------------------DSD 228
+ K +CN L+ ++ ++++ G D +
Sbjct: 223 ---VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVE 279
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
A G+ +++K V P+ T+N+++ GF + G + + EM + CEPD +Y+ L
Sbjct: 280 AARGLFEEMKFRGLV-PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ FC+ ++ + + EM+ ++ +VV+Y+T++ FC+ G M +A +F+ +M G+
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+ T+ L++ C+ G++ A + N+M + G E T LI LCD R+ EA +
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+ ++ G+ P SY LI G + M+ AL++ E+ G+G +P L +Y FI G
Sbjct: 459 LF-GKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 517
Query: 469 MKEGNVEMATMLRKEMFENQVR 490
+E A ++ EM E ++
Sbjct: 518 CSLEKIEAAKVVMNEMKECGIK 539
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 135/268 (50%), Gaps = 6/268 (2%)
Query: 225 LDSDATAGIGKDVKRV------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+D++ G D R+ V V NV T+ AL+ G ++ E+++ +M G
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P+ SY+ L+ F + + M A +L E++ + ++ D++ Y T I G C + ++ A+
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
EM G++++S+ + L++ Y ++G+ + + ++M E T VLI LC
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ V +A+D FGL + +I GLC++ ++E A + +MV KG P
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 648
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFE 486
Y++ +DG K+GNV A LR +M E
Sbjct: 649 TAYTSLMDGNFKQGNVLEALALRDKMAE 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 141/307 (45%), Gaps = 18/307 (5%)
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVH 248
+ G+ +++ NALI + K + E+ E+ G ++P++
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG----------------IKPDLL 508
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+ + G E + V EM G + + Y+ LM + + E L +EM
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS-GVESSSVTFEHLVNGYCRAGD 367
++ ++E VV + +I G C+ +++A ++F + G+++++ F +++G C+
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
V++A ++ M +KG P+ + L+ + V EAL L+ ++ + G+ +Y
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL-ALRDKMAEIGMKLDLLAYT 687
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
L+ GL ++++A EM+G+G P + + + + + G ++ A L+ + ++
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKH 747
Query: 488 QVRQEDG 494
Q+ D
Sbjct: 748 QLLTSDN 754
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 122/290 (42%), Gaps = 43/290 (14%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF----------------EVL 147
+L+SY +IH +A+ + A +++ L+ P L L+ +V+
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLN-ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 148 VKTYRECG--SAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWE 205
+ +ECG + ++ L+ + N + +D ++ L + V V T LI
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL---DIEVTVVTFCVLIDG 586
Query: 206 VSRGKGVISGYEIYREV---FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
+ + K V + + + FGL ++A F A++ G ++
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQANAA------------------IFTAMIDGLCKDNQ 628
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
E ++ +M + G PD +Y+ LM ++ + EA L ++M + ++ D++AY +
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 688
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
++ G ++ +A F EM G+ V ++ + G +D A+
Sbjct: 689 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAV 738
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 233/500 (46%), Gaps = 44/500 (8%)
Query: 8 HIIFS---VSKPKPKPQLLSQFSTSSSTP-------PSDQSHNLIATVVSLLTHHRS--- 54
HI+ + ++ K KP +L ++ SSTP ++ H +T L+ H+S
Sbjct: 4 HILLNSQLLTYNKLKPSILISYAHFSSTPIPIIDHLHAETLHPNASTDSPLVITHQSLLD 63
Query: 55 ---KSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATI 111
S+W HL+ L+P+ S L L LAL+F + K L + +
Sbjct: 64 SIQSSQW-HLIKHLAPNLSPSLISATLLSLHKKSDLALQFVTHIGFKGL---DIKTKCLA 119
Query: 112 IHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEV 171
+ ++SR+ +++ + S K E+ + R + VFD+LI+ C E+
Sbjct: 120 VAVVSRSPSPKSTLHLLKQTIESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCEL 179
Query: 172 KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA 231
K + C D M+ +G+ K+ T NA++ + + + +Y E+F L
Sbjct: 180 KRGDDAFECFD---MMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRL------ 230
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+++ V+TFN ++ +EG +K +D M LG +P+ +Y+ ++
Sbjct: 231 ----------KIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHG 280
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
+C R+ A + + M+++ VE D Y ++I G C+ G++ A +M G+ +
Sbjct: 281 YCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPT 340
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+VT+ L++GYC GD+ A ++M R+ P ST +LI L + ++ EA ++K
Sbjct: 341 AVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIK 400
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ G+ P +Y LI G C G ++A + EM+ KG +P+L Y++ I K
Sbjct: 401 -DMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKR 459
Query: 472 GNVEMATMLRKEMFENQVRQ 491
++ A ++FE +R+
Sbjct: 460 NRMKAA----DDLFEKIIRE 475
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 127/251 (50%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P V T+N L+ + EG ++ + + +M G PD +Y++L+ +C ++A
Sbjct: 372 ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAF 431
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM K ++ +V Y ++I + M A++ F ++ G + F L++G+
Sbjct: 432 NLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGH 491
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G++D A + +M ++ P+ T L+ C + +V EA ++LK + + G+ P
Sbjct: 492 CANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLK-EMKRRGIRPD 550
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY LI G + G + +A ++ EM+ GF P+L Y+A I G K ++A L K
Sbjct: 551 HISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLK 610
Query: 483 EMFENQVRQED 493
EM + +D
Sbjct: 611 EMVSKGITPDD 621
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 1/228 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+N L+ G+ R G +K ++ EM G +P +Y+ L+ V + RM+ A+
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAAD 466
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+E++ + D++ +N +I G C G + RA +EM + VT+ L+ G
Sbjct: 467 DLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGR 526
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G V+ A + +M R+G P+ + LI + + +A I + ++ G PT
Sbjct: 527 CREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTI-RDEMLSIGFNPT 585
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+Y LI+GLC+ + + A ++ EMV KG P Y + I+G K
Sbjct: 586 LLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGK 633
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 106/200 (53%), Gaps = 4/200 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P + T+ +L+ + + +D++ ++ R G PD ++ L+ C + A
Sbjct: 442 IQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAF 501
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM +N+ D V YNT++ G C G++ A E +EM G+ +++ L++GY
Sbjct: 502 ALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGY 561
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ GD++ A + ++M GF P T LI LC ++ A ++LK V K G+ P
Sbjct: 562 SKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSK-GITPD 620
Query: 423 EKSYMFLIKGLCEEGKMEEA 442
+ +Y LI+G+ GK++++
Sbjct: 621 DSTYFSLIEGI---GKVDDS 637
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 119/283 (42%), Gaps = 32/283 (11%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
++S+Y +IH L + A +I+ + P + +L+ Y CG+A F+L
Sbjct: 375 TVSTYNLLIHALFLEGKMDEADGMIK-DMGDSGIVPDSITYNILINGYCRCGNAKKAFNL 433
Query: 164 ---LIKCCLE------------VKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+I ++ + +++ D+ ++ G S + NALI
Sbjct: 434 HDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCA 493
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVED 268
+ + + +E+ D + +V P+ T+N LM G REG E+ +
Sbjct: 494 NGNLDRAFALLKEM-------------DKRNIV---PDEVTYNTLMQGRCREGKVEEARE 537
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
+ EM R G PD SY+ L++ + + + +A + +EM ++ YN +I G C
Sbjct: 538 LLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLC 597
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
+ + AEE +EM G+ T+ L+ G + D A
Sbjct: 598 KNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 214/443 (48%), Gaps = 25/443 (5%)
Query: 64 LCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGP 123
L S L P S+ + LK +P AL+FF ++ +H+ SY + HIL
Sbjct: 87 LSDSALAPIWVSKALVKLKGDPKSALKFFKEAGARAGFRHAAESYCVLAHILFCGMFYLD 146
Query: 124 ARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDI 183
AR VI+ + P F++L T C VFD L +++ +E+ C
Sbjct: 147 ARSVIKEWILLGREFPGCDFFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQC--F 204
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSRG-KG----------VISGYE----IYREVFGL--- 225
+M R L KV +CN L+ +S+ KG V++G Y V G
Sbjct: 205 WKMNKFRVLP-KVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAR 263
Query: 226 --DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
D +A + +++K +RP++ T+N+L+ G+ + G V+ EM GCEPD
Sbjct: 264 EGDLEAARSLFEEMK-AKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVI 322
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+Y+ L+ FC+ R+ +A + M+ + ++ +VV Y+T+I FC+ G + A +FF +M
Sbjct: 323 TYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDM 382
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G++ + T+ L++ C+ GD++ A + ++M + G T L+ LC+ R+
Sbjct: 383 IRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRM 442
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
EA ++ A ++K G ++ Y L G + ME+A+ + EM K +P L +Y
Sbjct: 443 REAEELFGA-LLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGT 501
Query: 464 FIDGYMKEGNVEMATMLRKEMFE 486
I G ++ +E + + +EM +
Sbjct: 502 KIWGLCRQNEIEDSMAVIREMMD 524
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 188/438 (42%), Gaps = 45/438 (10%)
Query: 87 LALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEV 146
LAL FF L S+ +Y +I L+R + AR + +++ P + +
Sbjct: 234 LALSFFKDMVVAGL-SPSVFTYNMVIGCLAREGDLEAARSLFE-EMKAKGLRPDIVTYNS 291
Query: 147 LVKTY----------------RECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLM 188
L+ Y ++ G P V ++ LI C + E+I + + +
Sbjct: 292 LIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCK---FERIPQAFEYLHGMK 348
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDS---------DATAGIGKDV 237
RGL V T + LI + ++ + + ++ GL DA IG D+
Sbjct: 349 QRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIG-DL 407
Query: 238 KRVVR---------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
+ V N+ T+ AL+ G +G + E+++ + + G + Y+ L
Sbjct: 408 NEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSL 467
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ + + M +A + EEM KN++ D++ Y T I G C E+ + REM G+
Sbjct: 468 FHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGL 527
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
++S + L++ Y + G A+ + +M G + T VLI LC V +A+
Sbjct: 528 TANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVR 587
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+ + GL P Y LI GLC+ +EEA + EM+ KG P +Y++ IDG
Sbjct: 588 YFD-HMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGN 646
Query: 469 MKEGNVEMATMLRKEMFE 486
MK GN A LR M E
Sbjct: 647 MKHGNPGEALSLRNRMVE 664
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 6/249 (2%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N + +L G+ + EK D+ EM + +PD Y + C + + ++ +
Sbjct: 460 NQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVI 519
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM D + + Y T+I + ++G+ A +EM G++ + VT+ L++G C+
Sbjct: 520 REMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKI 579
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G V A+ ++ M R G +P LI LC + EA ++ + K G+ P +
Sbjct: 580 GLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDK-GISPDKLV 638
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT-----ML 480
Y LI G + G EAL ++ MV G E L Y++ I G+ + G V++A ML
Sbjct: 639 YTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEML 698
Query: 481 RKEMFENQV 489
RK + +QV
Sbjct: 699 RKGIIPDQV 707
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 116/243 (47%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++P++ + + G R+ E V EM G + Y Y+ L+ + + + EA
Sbjct: 491 NLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEA 550
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L +EM+D ++ VV Y +I G C+IG + +A +F M +G++ + + + L++G
Sbjct: 551 VNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDG 610
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ ++ A ++N+M KG P+ LI EAL L+ R+V+ G+
Sbjct: 611 LCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALS-LRNRMVEIGMEL 669
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI G G+++ A + EM+ KG P + + Y + G++ A L
Sbjct: 670 DLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALH 729
Query: 482 KEM 484
+M
Sbjct: 730 DDM 732
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 21/229 (9%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALI---WEVSRGKGVIS--------GYEIYREVF 223
+IE + ++R +M GL+ LI ++V + ++ G +I +
Sbjct: 510 NEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTY 569
Query: 224 GLDSDATAGIGKDVKRVVR---------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
G+ D IG V++ VR ++PN+ + AL+ G + E+ ++++ EM
Sbjct: 570 GVLIDGLCKIGL-VQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEML 628
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
G PD Y+ L+ + EA L M + +E D+ AY ++I GF G++
Sbjct: 629 DKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQ 688
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
A+ EM G+ V L+ Y GD++ A+ +++DM R+G
Sbjct: 689 LAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGL 737
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 133/245 (54%), Gaps = 1/245 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
RV PNV+T+N L+ GF G +K + EM R GC P+ +Y+ L+ +C+ R+ EA
Sbjct: 5 RVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEA 64
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L + M K ++ ++++YN II G C G M A E EMG G VT+ L+NG
Sbjct: 65 FGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNG 124
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC+ G+ A++++ +M R G P T LI +C R + A++ ++ GL P
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR-GLRP 183
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
E++Y LI G +G + EA ++ EM GF PS+ Y+AFI G+ +E A +
Sbjct: 184 NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVV 243
Query: 482 KEMFE 486
+EM E
Sbjct: 244 QEMVE 248
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 127/244 (52%), Gaps = 1/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN+ ++N ++ G REG+ ++ ++ EM G PD +Y+ L+ +C+E +A
Sbjct: 76 MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL 135
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EM V VV Y +I C+ + RA EFF +M + G+ + T+ L++G+
Sbjct: 136 VIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGF 195
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
R G ++ A + N+M GF P T I C R+ EAL +++ V K GL P
Sbjct: 196 SRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK-GLAPD 254
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY +I G C +G+++ A +++ EMV KG P YS+ I G + + A L +
Sbjct: 255 VVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQ 314
Query: 483 EMFE 486
EM +
Sbjct: 315 EMLD 318
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 153/350 (43%), Gaps = 53/350 (15%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+I+ +++ + S+G+ + + N +I + R + +EI E+ G
Sbjct: 60 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM------GYKGF-- 111
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
P+ T+N L+ G+ +EG F + + EM R G P +Y+ L+ C+
Sbjct: 112 --------TPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA 163
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R + A + +++MR + + + Y T+I GF G + A EM SG S VT+
Sbjct: 164 RNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY 223
Query: 356 EH-----------------------------------LVNGYCRAGDVDSAILVYNDMCR 380
+++G+CR G++D A + +M
Sbjct: 224 NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 283
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
KG P+ T LI LC+ RR+ EA D L ++ GL P E +Y LI C EG +
Sbjct: 284 KGVSPDAVTYSSLIQGLCEMRRLTEACD-LSQEMLDMGLPPDEFTYTTLINAYCVEGDLN 342
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV-EMATMLRKEMFENQV 489
+AL + EM+ KGF P YS I+G K+ E +L K ++E V
Sbjct: 343 KALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESV 392
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 154/348 (44%), Gaps = 67/348 (19%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++ G+S V T ALI + + + + E + D R+ +RPN
Sbjct: 141 MVRNGVSPSVVTYTALINSMCKARNLNRAMEFF----------------DQMRIRGLRPN 184
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
T+ L+ GF R+G + + EM G P +Y+ + C RM EA + +
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 244
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV------- 359
EM +K + DVV+Y+TII GFC GE+ RA + +EM GV +VT+ L+
Sbjct: 245 EMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR 304
Query: 360 ----------------------------NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
N YC GD++ A+ ++++M KGF P+ T
Sbjct: 305 RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYS 364
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTE---------------KSYMFLIKGLCEE 436
VLI L + R EA +L + + + P++ KS + LIKG C +
Sbjct: 365 VLINGLNKQARTREAKRLLFKLIYEESV-PSDVTYDTLIENCSNIEFKSVVALIKGFCMK 423
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G M EA +V MV + +P +Y+ I G+ + GN+ A L KEM
Sbjct: 424 GLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEM 471
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
S V + T+ L+ G+C G++ + + +M R G P T LI C R+ E
Sbjct: 4 SRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDE 63
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
A +LK+ K G+ P SY +I GLC EG M+EA ++ EM KGF P Y+ +
Sbjct: 64 AFGLLKSMSSK-GMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 122
Query: 466 DGYMKEGNVEMATMLRKEMFENQV 489
+GY KEGN A ++ EM N V
Sbjct: 123 NGYCKEGNFHQALVIHAEMVRNGV 146
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 113/512 (22%), Positives = 194/512 (37%), Gaps = 115/512 (22%)
Query: 28 TSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQ--FSQIALGL--KN 83
+S P+ S+N+I + L K W L + G TP + ++ + G +
Sbjct: 72 SSKGMQPNLISYNVI--INGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEG 129
Query: 84 NPHLALRFFSFTQHKSLCKHSLS----SYATIIHILSRARLIGPAR---DVIRV-ALRSP 135
N H AL H + ++ +S +Y +I+ + +AR + A D +R+ LR
Sbjct: 130 NFHQALVI-----HAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLR-- 182
Query: 136 ENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
P + + L+ + G + I+ + G S
Sbjct: 183 ---PNERTYTTLIDGFSRQG--------------------LLNEAYRILNEMTESGFSPS 219
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR--VRPNVHTFNAL 253
V T NA I G V+ E E G+ V+ +V + P+V +++ +
Sbjct: 220 VVTYNAFI----HGHCVL---ERMEEALGV-----------VQEMVEKGLAPDVVSYSTI 261
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ GF R+G ++ + EM G PD +YS L+ CE RR+ EA L +EM D +
Sbjct: 262 ISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGL 321
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG------------ 361
D Y T+I +C G++ +A EM G +VT+ L+NG
Sbjct: 322 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 381
Query: 362 --------------------------------------YCRAGDVDSAILVYNDMCRKGF 383
+C G + A V+ M +
Sbjct: 382 LLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNH 441
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
+P + V+I C + +A ++ K ++ G P + + LIK L +EG EE
Sbjct: 442 KPGEAVYNVIIHGHCRGGNLPKAFNLYK-EMIHSGFVPHTVTVITLIKALFKEGMNEEMS 500
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+V + + E+ ++ KEGN+E
Sbjct: 501 EVIGDTLRSCRLNEAELAKVLVEINHKEGNME 532
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 146/572 (25%), Positives = 245/572 (42%), Gaps = 107/572 (18%)
Query: 5 ILKHIIFSVSKPKPKPQL-----LSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWN 59
IL+H I +S P L+Q ST S P S L+ ++ S S+W
Sbjct: 9 ILRHRISILSGAGYSPAAARLSSLAQTSTPESVLPPITSEILLESIRS--------SQW- 59
Query: 60 HLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRAR 119
H++ LTP+ S L L P+LA F+F H L + + I ++S+
Sbjct: 60 HIVEHVADKLTPSLVSTTLLSLVKTPNLA---FNFVNHIDLYRLDFQTQCLAIAVISKLS 116
Query: 120 LIGPARDVIRVALRSPENDPKLKLFEVLVKTY-RECGSAPFVFDLLIKCCLEVKNIEKIE 178
P +++ + S +N + LF+ LV + R + +FDLL++CC +++ +++
Sbjct: 117 SPKPVTQLLKEVVTSRKNSIR-NLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAI 175
Query: 179 TCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA------- 231
C +++ +G K TCN ++ +SR + + + Y +++ ++ +
Sbjct: 176 ECFYLMK---EKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232
Query: 232 ------GIGKDVK------RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
G K K V ++P + T+N L+ GF G E + EM G +
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEM----------------------------RDK 311
PD +Y+ +++ C E R E + +E+ RD+
Sbjct: 293 PDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDE 352
Query: 312 NVEHDVV----AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
V+ +V YNT+I G ++ AE RE+ G+ SVT+ L+NGYC+ GD
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK----------- 416
A ++++M G +P T LI LC K + EA ++ + V K
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472
Query: 417 --------------FGLF---------PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
F L P + +Y L++GLC EGK EEA ++ EM +G
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 532
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+P Y+ I GY K+G+ + A M+R EM
Sbjct: 533 IKPDHISYNTLISGYSKKGDTKHAFMVRDEML 564
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 36/236 (15%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N L+ G+ + G +K + EM G +P ++Y+ L+ V C + + REA++L+E++
Sbjct: 399 TYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV 458
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
K ++ D+V NT++ G C IG M RA +EM + + VT+ L+ G C G
Sbjct: 459 VGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKF 518
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A L+GE+ KRR G+ P SY
Sbjct: 519 EEA-------------------RELMGEM--KRR---------------GIKPDHISYNT 542
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LI G ++G + A V+ EM+ GF P+L Y+A + G K E+A L +EM
Sbjct: 543 LISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 199/415 (47%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + D +F +++T S
Sbjct: 7 STFRHTLHSYCTMIHFLCTHQMLPEAKSLIQIVVSRKGKDSASAVFATILETKGAQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+VF LI LE + C + R V TC ++ + + K +
Sbjct: 67 YVFSGLITAYLESGFLRDAIECFRLTR---ENKYWVPFDTCRKVLEHLMKLKYFKLVWSF 123
Query: 219 YREV-----------FGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
Y+E+ F + D G+ D +RP+V +FN LM G+ +
Sbjct: 124 YKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M EA KL++EM D+ + + V
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G++ A E +++M G +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + + SY LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFEYRK-RMIKENIRLDDVSYTALISGLCKEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P Y+ + + K G+V+M + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEM------QRDG 411
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 75/141 (53%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N L+ G ++G + +D+ EM+ G +PD +Y+ L+ C+E + A +
Sbjct: 274 PDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEY 333
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D V+Y +I G C+ G AE+ REM G++ + T+ +++ +C+
Sbjct: 334 RKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCK 393
Query: 365 AGDVDSAILVYNDMCRKGFEP 385
GDV + +M R G P
Sbjct: 394 NGDVKMGSKLLKEMQRDGHVP 414
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 199/415 (47%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + D +F +++T S
Sbjct: 7 STFRHTLHSYCTMIHFLCTHQMLLEAKTLIQIVVSRKGKDSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+VF LI LE + C + R V TC ++ + + K +
Sbjct: 67 YVFSGLITAYLESGFLRDAIECYRLTR---EHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 219 YREVFGLDSDAT----------------AGIGKDVKRVVR---VRPNVHTFNALMVGFYR 259
Y+E+ A+ + + V +R +RP+V +FN LM G+ R
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIR 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
+G +K + M G +PD Y+YSVL+ C+E +M EA +L+ EM DK + + V
Sbjct: 184 QGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G++ A E +++M + +T+ L+ G C+ GD+ A + N+M
Sbjct: 244 FTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + A + K R+++ + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGSCKDGDLETAFEYRK-RMIEENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 79/143 (55%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ ++ EM+ G +PD +Y+ L+ C++ + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M ++N+ D VAY +I G C+ G AE+ REM G++ S T+ ++N +
Sbjct: 332 EYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + + +M R G P
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGHVP 414
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K++ ++I + ++S+ LS + T N LI+ + + + + E+ + G+
Sbjct: 256 KVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEM------SMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G ++G E + M D +Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ D Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 418
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 209/464 (45%), Gaps = 58/464 (12%)
Query: 77 IALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPE 136
+ + +K + L L FF + + + +L S +IH+ ++ + A+ +I P+
Sbjct: 516 VLMKIKCDYRLVLDFFDWARSRR--DSNLESLCIVIHLAVASKDLKVAQSLISSFWERPK 573
Query: 137 ---NDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEV---------------------- 171
+ ++ F++LV TY++ GS P VFD+ + +E
Sbjct: 574 LNVTESFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSV 633
Query: 172 -----------KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY- 219
K+ K T + + R G+ V++ N +I V + + + +
Sbjct: 634 DSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLL 693
Query: 220 -REVFGLDSDATA---------------GIGKDVKRVVR--VRPNVHTFNALMVGFYREG 261
E+ G D + + K ++++ + ++PN +T+ +++ R
Sbjct: 694 LMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRIC 753
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ E+ + EM G PD Y+ L+ FC+ +R A K + EM +++ DV+ Y
Sbjct: 754 KLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 813
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
II GFC+IG+M A + F EM G+E +TF L+NGYC+AG + A V+N M +
Sbjct: 814 AIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQA 873
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G P T LI LC + + A ++L + K GL P +Y ++ GLC+ G +EE
Sbjct: 874 GCSPNVVTYTTLIDGLCKEGDLDSANELLH-EMWKIGLQPNIFTYNSIVNGLCKSGNIEE 932
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
A+K+ E G Y+ +D Y K G ++ A + EM
Sbjct: 933 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEML 976
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 147/303 (48%), Gaps = 20/303 (6%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSD-----------ATAGI 233
+ SR ++ V T A+I + ++ +++ E+ GL+ D AG
Sbjct: 800 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGH 859
Query: 234 GKDVKRV------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
KD RV PNV T+ L+ G +EG + ++ EM ++G +P+ ++Y+
Sbjct: 860 IKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 919
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
++ C+ + EA KL E + D V Y T++ +C+ GEM +A+E EM G
Sbjct: 920 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG 979
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
++ + VTF L+NG+C G ++ + N M KG P +T L+ + C + + A
Sbjct: 980 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAAT 1039
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
I K + G+ P K+Y L+KG C M+EA + EM GKGF S+ YS I G
Sbjct: 1040 AIYKDMCSR-GVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 1098
Query: 468 YMK 470
+ K
Sbjct: 1099 FFK 1101
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 122/252 (48%), Gaps = 1/252 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ ++PN+ T+N+++ G + G E+ + E G D +Y+ LM +C+ M +
Sbjct: 908 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 967
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A+++ EM K ++ +V +N ++ GFC G + E+ M G+ ++ TF LV
Sbjct: 968 AQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVK 1027
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
YC ++ +A +Y DMC +G EP+G T E L+ C+ R + EA + + K G
Sbjct: 1028 QYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGK-GFS 1086
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+ +Y LIKG + K EA ++ +M G EI+ F D K +
Sbjct: 1087 VSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDP 1146
Query: 481 RKEMFENQVRQE 492
E+ EN + E
Sbjct: 1147 IDEIIENYLVDE 1158
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 90/232 (38%), Gaps = 51/232 (21%)
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G V+ V +ARL DC + + VF R E W +V +Y
Sbjct: 628 GLVLSVDSCNVYLARLS--KDCNKTATAIIVF---REFPEVGVCW----------NVASY 672
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
N +I C++G + A M L G +++ ++NGYCR G++D + M +
Sbjct: 673 NIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQ 732
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
KG +P T Y +I LC K+
Sbjct: 733 KGLKPNSYT------------------------------------YGSIIGLLCRICKLA 756
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
EA + +EM+G+G P +Y+ +DG+ K G++ A+ EM + +
Sbjct: 757 EAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPD 808
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 195/408 (47%), Gaps = 23/408 (5%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L ++ A+ +I+ + D +F +++T S
Sbjct: 7 STVRHTLQSYCTMIHFLCTHQMFLEAKSLIQTVVSRKGKDSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+VF LI LE I C R+ V TC ++ + + K +
Sbjct: 67 YVFSGLITAYLESGFIRDAIECF---RLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGF 123
Query: 219 YREVFGLDSDAT----------------AGIGKDVKRVVR---VRPNVHTFNALMVGFYR 259
Y+E+ A+ + + V + +RP+V +FN LM G+ +
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E RM EA L+ EM D + + V
Sbjct: 184 LGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A + +R+M G VT+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
RKG +P+ T LI C + + A + L+ R++K + + Y LI GLC+EG+
Sbjct: 304 RKGLKPDKITYTTLIDGSCKEGDLETAFE-LRERMIKESIRLDDVVYTALIFGLCQEGRA 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+A K+ EM+ G +P E Y+ ++ + K+G+V+ A+ L +EM N
Sbjct: 363 VDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRN 410
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 231/487 (47%), Gaps = 32/487 (6%)
Query: 11 FSVSKPKPKPQL---LSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS 67
S P P+L + FS+ +ST + SH +S L +K W+ L ++ +
Sbjct: 14 LSTRFPSLDPKLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLI---AKQHWSKLKTIVKE 70
Query: 68 GLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDV 127
P+ Q + P L L +F +TQ + H++ + ++H+L+ A+ R +
Sbjct: 71 -TNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRAL 129
Query: 128 IRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRML 187
+ ++ + V C ++ + D+L+ VKN E ++ ++
Sbjct: 130 LDSFAKNAHYSNSTIFHSLSVLGSWGCANS-IIVDMLVWA--YVKNGE-MDLALEGFDRA 185
Query: 188 MSRGLSVKVSTCNA-LIWEVSRGK-GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
G + +CN L+ V G+ GV+ +Y+E+ ++R R+
Sbjct: 186 GDYGFRLSALSCNPMLVSLVKEGRIGVVE--SVYKEM--------------IRR--RIGV 227
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV TF+ ++ G + G F+K DV +M G P +Y+ ++ +C+ +M +A+ L
Sbjct: 228 NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALL 287
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM K + + + +N +I GFC + A++ F EM G++ + VT+ L+NG C
Sbjct: 288 KEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G +D A+ + + M G +P T LI C K+ + EA ++L + K GL P +
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD-DIGKRGLAPNVIT 406
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+ LI + G+M++A +++ M+ G P++ Y+ I G+ +EGNV+ A L KEM
Sbjct: 407 FNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEME 466
Query: 486 ENQVRQE 492
N ++ +
Sbjct: 467 GNGLKAD 473
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 127/284 (44%), Gaps = 33/284 (11%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K++ + + + GL V T NALI + K + E+ LD G+
Sbjct: 349 KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM------LDDIGKRGLA- 401
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
PNV TFN L+ + + G + + M G P+ +Y+ L+ FC E
Sbjct: 402 ---------PNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
++EA KL +EM ++ D+V YN ++ C+ GE +A EM G+ S +T+
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTY 512
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++GY R G+ +A+ V M +KG T VLI C+K ++ EA +L +
Sbjct: 513 NALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLE 572
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
K GL P +Y L + EM+ KGF P ++
Sbjct: 573 K-GLIPNRTTYDIL----------------RDEMMEKGFIPDID 599
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
++S+ + LV Y + G++D A+ ++ GF + ++ L + R+ +
Sbjct: 157 ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESV 216
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
K +++ + ++ +I GLC+ GK ++A V +M GF PS+ Y+ IDGY
Sbjct: 217 YK-EMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYC 275
Query: 470 KEGNVEMATMLRKEMFENQVRQED 493
K G + A L KEM ++ +
Sbjct: 276 KAGKMFKADALLKEMVAKRIHPNE 299
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 235/480 (48%), Gaps = 29/480 (6%)
Query: 26 FSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNP 85
F S P+ + LI + +++ RS+ + +L S + + +KN+
Sbjct: 58 FPDYSPKKPTIRDTELIHDITAVIKLRRSEP-LHRILKAHESNFRYDHLIWVLMNIKNDY 116
Query: 86 HLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFE 145
+L L FF + + + + SL + IIHI + + A +++ + + + +K+ +
Sbjct: 117 NLVLAFFDWARVRR--EPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQ 174
Query: 146 V---LVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
L+ TY+ G P FD+ + +E+ ++ + +D L+S GL V V +CNA
Sbjct: 175 FTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLD---KLLSYGLVVTVDSCNAF 231
Query: 203 IWEVSRG-KGVISGYEIYREVFGLDSDATA-----------GIGKDVKRVV------RVR 244
+ ++ +G+ +++ E +G+ + T+ G K+ R++
Sbjct: 232 LSRIANNSEGIEMAIKVFCE-YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST 290
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V +++ ++ G+ G +K + +M G +P+ Y+Y+ ++ + C+ + EAEK+
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM + + D V Y T+I GF ++G + A ++F EM + +T+ L+ G+ +
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G V ++++M +G +P+ T LI C + A L +V+ G+ P
Sbjct: 411 GGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFS-LHNEMVQMGMTPNIV 469
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI GLC+ G+++ A ++ EM KG + ++ IY++ ++G K GN+E A L KEM
Sbjct: 470 TYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM 529
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 143/300 (47%), Gaps = 17/300 (5%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++S+ +S T LI +G VI ++ E+ I + +K P+
Sbjct: 389 MLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM----------ISRGLK------PD 432
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
T+ L+ + + G + EM ++G P+ +Y L+ C+ + A +L +
Sbjct: 433 EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLD 492
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
EMR K ++ +V YN+++ G C+ G + +A + +EM ++G++ ++T+ +++ YCR G
Sbjct: 493 EMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLG 552
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
D+D A + +M +G +P T VL+ C + E D L +++ G+ P +Y
Sbjct: 553 DIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC-MLGMLEDGDRLLGWMLEKGIVPDAITY 611
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
L+K C M K+ M +G P Y+ I G+ K N++ A L KEM E
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 151/325 (46%), Gaps = 20/325 (6%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV-----------FGLDSDATAGIGK 235
++SRGL T LI + +++ + ++ E+ +G D G+
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483
Query: 236 --------DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
D R ++ NV +N+++ G + G E+ + EM G +PD +Y+
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
++ +C + +A KL +EM D+ ++ VV +N ++ GFC +G + + M G
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ ++T+ L+ +C +++ +Y M +G P+ +T +LI C R + EA
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+ K + K G PT SY LIK ++ K EA ++ EM G G EIY+ F+D
Sbjct: 664 FLYKEMIEK-GYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDM 722
Query: 468 YMKEGNVEMATMLRKEMFENQVRQE 492
+EG+VE+ L E E + E
Sbjct: 723 CYEEGDVEITLNLCDEAIEKCLLNE 747
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 36/177 (20%)
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ + +YN II C +G++ A +M V++ +++GYC G++ A+
Sbjct: 254 ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKAL 313
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+ +DM KG +P T Y +I
Sbjct: 314 KLMDDMQIKGLKPNRYT------------------------------------YNSIILL 337
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
LC+ GK EA KV EM+ + P +Y+ I G+ K G+V A EM ++
Sbjct: 338 LCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKI 394
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 235/480 (48%), Gaps = 29/480 (6%)
Query: 26 FSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNP 85
F S P+ + LI + +++ RS+ + +L S + + +KN+
Sbjct: 58 FPDYSPKKPTIRDTELIHDITAVIKLRRSEP-LHRILKAHESNFRYDHLIWVLMNIKNDY 116
Query: 86 HLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFE 145
+L L FF + + + + SL + IIHI + + A +++ + + + +K+ +
Sbjct: 117 NLVLAFFDWARVRR--EPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQ 174
Query: 146 V---LVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
L+ TY+ G P FD+ + +E+ ++ + +D L+S GL V V +CNA
Sbjct: 175 FTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLD---KLLSYGLVVTVDSCNAF 231
Query: 203 IWEVSRG-KGVISGYEIYREVFGLDSDATA-----------GIGKDVKRVV------RVR 244
+ ++ +G+ +++ E +G+ + T+ G K+ R++
Sbjct: 232 LSRIANNSEGIEMAIKVFCE-YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST 290
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V +++ ++ G+ G +K + +M G +P+ Y+Y+ ++ + C+ + EAEK+
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM + + D V Y T+I GF ++G + A ++F EM + +T+ L+ G+ +
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G V ++++M +G +P+ T LI C + A L +V+ G+ P
Sbjct: 411 GGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFS-LHNEMVQMGMTPNIV 469
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI GLC+ G+++ A ++ EM KG + ++ IY++ ++G K GN+E A L KEM
Sbjct: 470 TYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM 529
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 143/300 (47%), Gaps = 17/300 (5%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++S+ +S T LI +G VI ++ E+ I + +K P+
Sbjct: 389 MLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM----------ISRGLK------PD 432
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
T+ L+ + + G + EM ++G P+ +Y L+ C+ + A +L +
Sbjct: 433 EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLD 492
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
EMR K ++ +V YN+++ G C+ G + +A + +EM ++G++ ++T+ +++ YCR G
Sbjct: 493 EMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLG 552
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
D+D A + +M +G +P T VL+ C + E D L +++ G+ P +Y
Sbjct: 553 DIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC-MLGMLEDGDRLLGWMLEKGIVPDAITY 611
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
L+K C M K+ M +G P Y+ I G+ K N++ A L KEM E
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 152/325 (46%), Gaps = 20/325 (6%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV-----------FGLDSDATAGIGK 235
++SRGL T LI + +++ + ++ E+ +G D G+
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483
Query: 236 --------DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
D R ++ NV +N+++ G + G E+ + EM G +PD +Y+
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
++ +C + +A KL +EM D+ ++ VV +N ++ GFC +G + + M G
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ ++T+ L+ +C +++ +Y M +G P+ +T +LI C R + EA
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+ K + K G PT SY LIK ++ K+ EA ++ EM G G EIY+ F+D
Sbjct: 664 FLYKEMIEK-GYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDM 722
Query: 468 YMKEGNVEMATMLRKEMFENQVRQE 492
+EG+VE+ L E E + E
Sbjct: 723 CYEEGDVEITLNLCDEAIEKCLLNE 747
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 36/177 (20%)
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ + +YN II C +G++ A +M V++ +++GYC G++ A+
Sbjct: 254 ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKAL 313
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+ +DM KG +P T Y +I
Sbjct: 314 KLMDDMQIKGLKPNRYT------------------------------------YNSIILL 337
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
LC+ GK EA KV EM+ + P +Y+ I G+ K G+V A EM ++
Sbjct: 338 LCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKI 394
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 231/487 (47%), Gaps = 32/487 (6%)
Query: 11 FSVSKPKPKPQL---LSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS 67
S P P+L + FS+ +ST + SH +S L +K W+ L ++ +
Sbjct: 14 LSTRFPSLDPKLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLI---AKQHWSKLKTIVKE 70
Query: 68 GLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDV 127
P+ Q + P L L +F +TQ + H++ + ++H+L+ A+ R +
Sbjct: 71 -TNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRAL 129
Query: 128 IRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRML 187
+ ++ + V C ++ + D+L+ VKN E ++ ++
Sbjct: 130 LDSFAKNAHYSNSTIFHSLSVLGSWGCANS-IIVDMLVWA--YVKNGE-MDLALEGFDRA 185
Query: 188 MSRGLSVKVSTCNA-LIWEVSRGK-GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
G + +CN L+ V G+ GV+ +Y+E+ ++R R+
Sbjct: 186 GDYGFRLSALSCNPMLVSLVKEGRIGVVE--SVYKEM--------------IRR--RIGV 227
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV TF+ ++ G + G F+K DV +M G P +Y+ ++ +C+ +M +A+ L
Sbjct: 228 NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALL 287
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM K + + + +N +I GFC + A++ F EM G++ + VT+ L+NG C
Sbjct: 288 KEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G +D A+ + + M G +P T LI C K+ + EA ++L + K GL P +
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD-DIGKRGLAPNVIT 406
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+ LI + G+M++A +++ M+ G P++ Y+ I G+ +EGNV+ A L KEM
Sbjct: 407 FNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEME 466
Query: 486 ENQVRQE 492
N ++ +
Sbjct: 467 GNGLKAD 473
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 142/561 (25%), Positives = 233/561 (41%), Gaps = 94/561 (16%)
Query: 1 MAVQILKHIIFSVSKPKPKPQLL-SQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRW- 58
M +LK +F + K P L+ S TS P + NL+ V+ L++ + W
Sbjct: 1 MLKPLLKSPLFLLKKKNPLHFLVFSSVPTSYPFPKTTPFPNLVFKVLDLIS---TDPHWP 57
Query: 59 -NHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSR 117
N L+ S L P S+I + N AL+FF + + KH + + ++++ L +
Sbjct: 58 KNPELNRLASTLRPHHVSKI-INTHINTDTALQFFYWISKRHFYKHDMGCFVSMLNRLVK 116
Query: 118 ARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL--LIKCCLEVKNIE 175
+++ PA V + +++ N+ +LK + S F F L L++ +
Sbjct: 117 DKILAPADHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFD 176
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+ + ++ + S G+ + T N +I + + V ++ ++F D
Sbjct: 177 MVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFD--------- 227
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ P+ T+ +L++G R +K +V+ M + GC P+ +YS L+ C E
Sbjct: 228 -------LCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNE 280
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ EA + EEM +K +E V Y I C+IG + A R MG G S T+
Sbjct: 281 GRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTY 340
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL-------- 407
+++G RAG ++ AI +Y+ M ++G P T LI ELC + R AL
Sbjct: 341 TAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEG 400
Query: 408 ---------------------DILKARVV-----KFGLFPTEKSYMFLI----------- 430
DI KA VV K G PT +Y LI
Sbjct: 401 HGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNN 460
Query: 431 ------------------------KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
G C+ GK++ A EM+ G P+ Y+A ID
Sbjct: 461 ATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMID 520
Query: 467 GYMKEGNVEMATMLRKEMFEN 487
GY KEG +++A L + M EN
Sbjct: 521 GYCKEGKIDVALSLFERMEEN 541
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 198/486 (40%), Gaps = 79/486 (16%)
Query: 62 LSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQH-KSLCKHSLSSYATIIHILSRARL 120
LC T ++ + LG N L F F + K C + +Y+T+I+ L
Sbjct: 226 FDLCPDAFT---YTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGR 282
Query: 121 IGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK-----CCLEVKNIE 175
IG A D++ + +P + + V + + + G +L+ C V+
Sbjct: 283 IGEAMDMLE-EMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYT 341
Query: 176 ----------KIETCVDIVRMLMSRGLSVKVSTCNALIWEVS---------------RGK 210
K+E + + ++ GL T NALI E+ G
Sbjct: 342 AIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGH 401
Query: 211 GVISGYEIYREV----FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV----------- 255
G ++ + Y ++ FG+D A + + P V T+N L+V
Sbjct: 402 GTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNA 461
Query: 256 ------------------------GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
GF + G + + EM + G P+ ++Y+ ++
Sbjct: 462 TRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDG 521
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
+C+E ++ A L+E M + + YN II G + + AE+F +M G++ +
Sbjct: 522 YCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPN 581
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
++T+ L+NG C+ + A ++++M +K P T LI LC + +V A
Sbjct: 582 TITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----- 636
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
R+ + G PT +Y L+ GLC EG+ EA ++ M KG PS+EIY + + + K
Sbjct: 637 ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKS 696
Query: 472 GNVEMA 477
V+ A
Sbjct: 697 LKVDCA 702
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 5/231 (2%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ T+NA++ G + F + E +M G +P+ +Y+ L+ C+ A K++
Sbjct: 546 SIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIF 605
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM KN + Y ++I G C+ G++ AE +G E + T+ LV+G CR
Sbjct: 606 HEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE----NGCEPTIDTYSTLVSGLCRE 661
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + A + +M KG P L+ C +V AL+I VK G P
Sbjct: 662 GRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVK-GFQPHLFI 720
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
Y LI LC + EEAL + ++ K + L +++ +DG ++EG+ ++
Sbjct: 721 YKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDL 771
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 5/223 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN T+ A++ G+ +EG + ++ M GC +Y+ +++ + R EAE
Sbjct: 508 ISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAE 567
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K +M ++ ++ + + Y ++I G C+ A + F EM ++ T+ L+ G
Sbjct: 568 KFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGL 627
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G VD+A + G EP T L+ LC + R EA +++ K GL P+
Sbjct: 628 CQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEK-GLSPS 682
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+ Y L+ C+ K++ AL++ M KGF+P L IY I
Sbjct: 683 MEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLI 725
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 130/286 (45%), Gaps = 21/286 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
KI+ + + + G S + T NA+I +S+G S+A K
Sbjct: 527 KIDVALSLFERMEENGCSASIETYNAIISGLSKGNRF--------------SEAEKFCAK 572
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
++ ++PN T+ +L+ G + A ++ EM + C P+ ++Y+ L+ C+E
Sbjct: 573 MTEQ--GLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQE 630
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
++ AE+L E E + Y+T++ G C G A + M G+ S +
Sbjct: 631 GKVDAAERLTEN----GCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIY 686
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+ +C++ VD A+ ++N M KGF+P +VLI LC R EAL+I ++ ++
Sbjct: 687 CSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQS-LL 745
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
K + L+ GL +EG + +K M + PSL Y
Sbjct: 746 KKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTY 791
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 185/396 (46%), Gaps = 20/396 (5%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+++I++ + D +FE +++ S
Sbjct: 7 STFRHTLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDV 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+VF LI LE + C + R V TC ++ + K S +
Sbjct: 67 YVFSGLITAYLESGFLHDALECFRLTR---EHKFWVPFDTCRKVLEHFMKLKYFKSVWGF 123
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
Y+E+ A+ ++ FN LM F +EG + V+ E+ + G
Sbjct: 124 YKEILECGYPAS----------------LYFFNILMHRFCKEGEMRLAQSVFDEITKWGL 167
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P S++ LM + + E +L M ++ DV Y+ +I G C+ +M A E
Sbjct: 168 RPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANE 227
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F EM +G+ + VTF L++G+C+ G +D A+ Y +M R+GF P+ T LI LC
Sbjct: 228 LFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLC 287
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ + +A D++ +K GL P + +Y LI G C+EG +E A K + M+ +
Sbjct: 288 KEGDLKQAQDLIDEMSMK-GLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDD 346
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
Y+A I G +EG A + +EM ++ ++G
Sbjct: 347 VAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNG 382
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TF L+ G + G+ + + + EM R G PD +Y+ L+ C+E +++A+ L
Sbjct: 239 PNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDL 298
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EM K ++ D + Y T+I G C+ G++ A ++ + M + V + L++G CR
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCR 358
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
G A + +M G +P+ T ++I E C K V +LK
Sbjct: 359 EGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLK 405
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 77/141 (54%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G +EG ++ +D+ EM+ G +PD +Y+ L+ C+E + A K
Sbjct: 274 PDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKY 333
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C G+ AE+ REM G++ + T+ ++N +C+
Sbjct: 334 KKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCK 393
Query: 365 AGDVDSAILVYNDMCRKGFEP 385
GDV + +M R G P
Sbjct: 394 KGDVKMGSKLLKEMQRDGHVP 414
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 205/468 (43%), Gaps = 29/468 (6%)
Query: 32 TPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLA--- 88
TPP+ H+ I T +S + L LTP + + NPH
Sbjct: 28 TPPTSHCHDPILTTISEAIKVSPTKPLHSSLKRILPSLTPNHLIDL---INLNPHSLSPP 84
Query: 89 --LRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEV 146
L FF + + + S+ SY T+ H L +++ A+ +++ + + +F
Sbjct: 85 SLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTS 144
Query: 147 LVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
+++ R + VF +L+ + C +VR L + +C L +
Sbjct: 145 VLEA-RGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVR---KHNLQIPFHSCGYLFDRL 200
Query: 207 SRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
+ + Y E+ LD P+V FN LM +E +
Sbjct: 201 MKLNLTSPAWAFYEEI--LDCGYP--------------PDVCKFNVLMHRLCKEHKINEA 244
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ ++ E+ + G P S++ L+ +C+ + + +L M + V DV Y+ +I G
Sbjct: 245 QLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLING 304
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
C+ G++ A + F EM G+ + VTF L+NG+C G D + +Y M RKG +P+
Sbjct: 305 LCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPD 364
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T LI LC + EA ++ + + GL P + +Y LI G C+EG +E AL+++
Sbjct: 365 VITYNTLINGLCKVGDLREAKKLV-IEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIR 423
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
EMV +G E ++A I G+ +EG V A +EM E ++ +D
Sbjct: 424 KEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDA 471
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 81/152 (53%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ T+ L+ G +EG E ++ EM + G E D +++ L++ FC E ++ EAE
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAE 455
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EM + ++ D Y +I GFC+ G++ + +EM G VT+ L+NG
Sbjct: 456 RTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGL 515
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ G + +A ++ + M G P+ T +L+
Sbjct: 516 CKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 205/468 (43%), Gaps = 29/468 (6%)
Query: 32 TPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLA--- 88
TPP+ H+ I T +S + L LTP + + NPH
Sbjct: 28 TPPTSHCHDPILTTISEAIKVSPTKPLHSSLKRILPSLTPNHLIDL---INLNPHSLSPP 84
Query: 89 --LRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEV 146
L FF + + + S+ SY T+ H L +++ A+ +++ + + +F
Sbjct: 85 SLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTS 144
Query: 147 LVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
+++ R + VF +L+ + C +VR L + +C L +
Sbjct: 145 VLEA-RGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVR---KHNLQIPFHSCGYLFDRL 200
Query: 207 SRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
+ + Y E+ LD P+V FN LM +E +
Sbjct: 201 MKLNLTSPAWAFYEEI--LDCGYP--------------PDVCKFNVLMHRLCKEHKINEA 244
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ ++ E+ + G P S++ L+ +C+ + + +L M + V DV Y+ +I G
Sbjct: 245 QLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLING 304
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
C+ G++ A + F EM G+ + VTF L+NG+C G D + +Y M RKG +P+
Sbjct: 305 LCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPD 364
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T LI LC + EA ++ + + GL P + +Y LI G C+EG +E AL+++
Sbjct: 365 VITYNTLINGLCKVGDLREAKKLV-IEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIR 423
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
EMV +G E ++A I G+ +EG V A +EM E ++ +D
Sbjct: 424 KEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDA 471
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ T+ L+ G +EG E ++ EM + G E D +++ L++ FC E ++ EAE
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAE 455
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EM + ++ D Y +I GFC+ G++ + +EM G VT+ L+NG
Sbjct: 456 RTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGL 515
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD--KRRVFEALDILKARVVKFGLF 420
C+ G + +A ++ + M G P+ T +L+ C R F+ L K V +G
Sbjct: 516 CKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSEKGLVQDYG-- 573
Query: 421 PTEKSYMFLIKGL---CEE 436
SY LI L C+E
Sbjct: 574 ----SYTSLIGDLRKTCKE 588
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 136/526 (25%), Positives = 230/526 (43%), Gaps = 72/526 (13%)
Query: 15 KPKPKPQLLSQFSTSSSTPPSDQSHNLIATVV-SLLTHHRSKSRWNHLLSLCRSGLTPTQ 73
KPKP L S S+ P ++H+++ T+ S+ T H + ++ L+ + P+
Sbjct: 2 KPKPHHFHLHHNLVSFSSKPHYKNHDILYTISESINTIHNNNPNPDYSLNPTLKRILPSL 61
Query: 74 FSQIALGLKNNPHLAL------RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDV 127
S L N L+L FF++ + +H+L +Y+T+ H LS L+ +
Sbjct: 62 TSHHITNLINLNPLSLPPLSLFSFFNYLASRPPFRHTLHNYSTMAHFLSSHNLLSQTHSL 121
Query: 128 ---IRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIV 184
I + + + V T+ + VFD LI + + E IE + +
Sbjct: 122 FLFIISKMGHHSSTSLISSLIQTVPTHHRHNHSVLVFDALI---IAYTDSEFIEDAIQCL 178
Query: 185 RMLMSRGLSVKVSTCNALIWEVSR-GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRV 243
R++ S+ V C+ L+ V + + +E Y EV
Sbjct: 179 RLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEVLDYG----------------Y 222
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-------------------------- 277
PNV+ FN LM GF + G V+ E++R G
Sbjct: 223 PPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFV 282
Query: 278 ---------CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
PD ++YS L+ C+E R+ EA L++EM + + + V + T+I G C
Sbjct: 283 LKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQC 342
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ G++ A F M G+ +T+ L+NG CR GD+ A + N+M GF+P+
Sbjct: 343 KHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKI 402
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
T L+ C + AL+I K R+V+ G+ + ++ LI GLC +G++ +A ++ +
Sbjct: 403 TFTTLMDGCCKDGDMDSALEI-KDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKD 461
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
M+ G +P Y+ ID + K+G+V+M L KEM Q DG
Sbjct: 462 MLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEM------QRDG 501
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 165/335 (49%), Gaps = 20/335 (5%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
++F++L+ ++ ++ D + RGL V + N LI R K V G+ +
Sbjct: 227 YLFNILMHGFCKIGDVMNARMVFDEIS---RRGLRPSVVSFNTLISGYCRSKNVEEGFVL 283
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
K V R+ P+V T++AL+ G +E E+ ++ EM +G
Sbjct: 284 ----------------KSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGL 327
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P+ +++ L+ C+ ++ A + +E M+D+ + D++ YN +I G C G++ A +
Sbjct: 328 VPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARK 387
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
EM +G + +TF L++G C+ GD+DSA+ + + M +G E + LI LC
Sbjct: 388 LLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLC 447
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
RV +A +LK ++ G P + +Y +I C++G ++ K+ EM G P +
Sbjct: 448 RDGRVRDAERMLKD-MLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGV 506
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
Y+A ++G+ K+G ++ A ML M +V D
Sbjct: 507 VTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPND 541
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 16/223 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
KI+ + ++ RG+ + T NALI + R + ++ E+ G
Sbjct: 346 KIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNG--------- 396
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ TF LM G ++G + ++ M G E D +++ L++ C +
Sbjct: 397 -------FKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRD 449
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+R+AE++ ++M + D Y +I FC+ G++ + +EM G VT+
Sbjct: 450 GRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTY 509
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
L+NG+C+ G + +A ++ + M P T +L+ C
Sbjct: 510 NALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHC 552
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 63/118 (53%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
F AL+ G R+G E + +M G +PD +Y++++ FC++ ++ KL +EM
Sbjct: 438 AFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEM 497
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+ VV YN ++ GFC+ G+M A+ M V + +TF L++G+C+ G
Sbjct: 498 QRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ T+ ++ F ++G + + EM R G P +Y+ LM FC++ +M+ A+
Sbjct: 468 KPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKM 527
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
L M + V + + +N ++ G C+ G + F E GL S ++ LVN
Sbjct: 528 LLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKIFNGEKGLV---SDYASYTALVN 581
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 196/412 (47%), Gaps = 29/412 (7%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+H+L SY T+IH LS + I A+ +I++ + D +F +++T S +VF
Sbjct: 10 RHTLHSYCTMIHFLSTHQRILEAKSLIQIVVSRKGKDSASAVFAAILETKGAQRSDIYVF 69
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
LI LE + C + R V TC ++ + + K + Y+E
Sbjct: 70 SGLITAYLESGFLRDAIECFRLTR---KHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKE 126
Query: 222 VFGLD----------------SDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGA 262
+ + + + V + +RP+V +FN L+ G+ R G
Sbjct: 127 ILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGD 186
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
+K + M G PD Y+ +VL+ C+E +M EA +L+ EM DK + + V + T
Sbjct: 187 LDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTT 246
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G C+ G + A E +++M G +T+ L+ G CR GD+ A + +M KG
Sbjct: 247 LIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKG 306
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+P+ T LI C + + A + L+ R+++ + + +Y LI GLC+EG+ +A
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFE-LRKRMIEESIRLDDVAYTALISGLCQEGRAVDA 365
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
K+ EM+ G +P Y+ I+G+ K+G+V+ A+ L KEM Q DG
Sbjct: 366 EKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEM------QRDG 411
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 82/141 (58%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G R+G ++ D+ VEM+ G +PD +Y+ L+ C+E + A +L
Sbjct: 274 PDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEL 333
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M ++++ D VAY +I G C+ G AE+ REM G++ + T+ ++NG+C+
Sbjct: 334 RKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCK 393
Query: 365 AGDVDSAILVYNDMCRKGFEP 385
GDV +A + +M R G P
Sbjct: 394 QGDVKTASKLLKEMQRDGHVP 414
>gi|357494871|ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519059|gb|AET00683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 861
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 217/486 (44%), Gaps = 44/486 (9%)
Query: 25 QFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRW-NHLLSLCRS-GLTPTQFSQIALGLK 82
+T ++T + N T+ + T RSK RW N L+S S + +F L +
Sbjct: 15 NLTTETTTKQDPKDQNFTQTLNEICTITRSKPRWENTLISQYPSFNFSNPKFFLSYLKHQ 74
Query: 83 NNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLK 142
NN L+LRF + K SS + L A + A+ ++ P+ND
Sbjct: 75 NNTFLSLRFLHWLTSHCGFKPDQSSCNALFDALVDAGAVKAAKSLLEYPDFVPKNDS--- 131
Query: 143 LFEVLVKTYRECGSAPFVFDLLIK---------------CCLEVKNIEKIETCVDIVRML 187
E V+ E G VFD+ + C L + + + + ++
Sbjct: 132 -LEGYVRLLGENGMVEEVFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELM 190
Query: 188 MSRGLSVK--VSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRV 243
+ G+ V V T LI V +GYE+ R+V GL D T
Sbjct: 191 IESGVGVNIDVETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTV------------ 238
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
FNAL+ GF ++ +++V ++ M + C P Y+Y ++ + R+ EA +
Sbjct: 239 ------FNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFR 292
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ +++D+ D V Y T+I GFC++G +A A + + EM G+ + T+ ++ GYC
Sbjct: 293 VFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYC 352
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ D A +Y+DMC +G+ + +I L + EAL + K G+
Sbjct: 353 KVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRK-GIARDL 411
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
SY LIKGLC+EG++ +A + +++ +G EPS+ ++ I K G+ E A L K+
Sbjct: 412 ISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKD 471
Query: 484 MFENQV 489
M + +
Sbjct: 472 MHDRHL 477
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 81/159 (50%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++N+L+ G +EG K ++ ++ G EP S++ L+ C+ A +L ++M
Sbjct: 413 SYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDM 472
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
D+++E ++ +I G + G+ A+ E+ +M ++ + TFEHL++ R +
Sbjct: 473 HDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLSWKLKPNMQTFEHLIDCLKRENRL 532
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
D ++V + M R+G+ E S I L+ + K F L
Sbjct: 533 DDILIVLDLMFREGYRLEKSRICSLVTKFSKKNFPFPHL 571
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 209/444 (47%), Gaps = 42/444 (9%)
Query: 67 SGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPAR- 125
S LTP L ++ P AL FF+ K++ Y+ IIH+L ++L+ AR
Sbjct: 26 SSLTPDSLITTVLNCRS-PWKALEFFNAAPEKNI-----QLYSAIIHVLVGSKLLSHARY 79
Query: 126 ---DVIRVALRS--PENDPKLKLFEVLVKTYRECGSAPFVF-DLLIKCCLEVKNIEKIET 179
D+++ ++S P + +L E+ + P V+ +L+I C K+E
Sbjct: 80 LLNDLVQNLVKSHKPYHACQLAFSEL--SRLKSSKFTPNVYGELIIVLC-------KMEL 130
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV-----------FGLDSD 228
+ + M G ++ + CN L++ + + + IY E+ FG D
Sbjct: 131 VEEALSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLID 190
Query: 229 ATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
G D RV + P V + L+ G + E+ E + M +G P
Sbjct: 191 GCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYP 250
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+ Y+Y+ LM +C+ ++A +L+++M + + DVV + +I G C+ GEM A F
Sbjct: 251 NVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLF 310
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
M V + + L++ YC+ GDV A+ ++ ++ R P+ T +LI LC
Sbjct: 311 VNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSV 370
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
R EA +I + ++ K G+ +Y LI G C+EGKM++AL++ ++M G EP++
Sbjct: 371 SRTEEAGNIFE-KMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVIT 429
Query: 461 YSAFIDGYMKEGNVEMATMLRKEM 484
+S IDGY K N++ A + EM
Sbjct: 430 FSTLIDGYCKIRNLQAAMGIYSEM 453
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 183/383 (47%), Gaps = 35/383 (9%)
Query: 117 RARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNI 174
R + I P V + +R +D K++ E + + RE G P + ++ L+ ++ N
Sbjct: 209 RVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANA 268
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
++ + + + ++ GL V T LI + + + + ++ +
Sbjct: 269 KQ---ALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFS-------- 317
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
V PN+ +N+L+ + + G + +++E+ R PD ++YS+L+ C
Sbjct: 318 --------VTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCS 369
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R EA ++E+M + + + V YN++I G C+ G+M +A E +M +GVE + +T
Sbjct: 370 VSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVIT 429
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
F L++GYC+ ++ +A+ +Y++M K P+ T +I C + EAL L + +
Sbjct: 430 FSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALK-LYSDM 488
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV----------GKGFEPSLE---IY 461
+ G+ P + L+ GLC++GK+ +AL++ E + G +PSL Y
Sbjct: 489 LDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAY 548
Query: 462 SAFIDGYMKEGNVEMATMLRKEM 484
+A I G ++G A L +M
Sbjct: 549 TALIHGLCQDGQFSKAVKLFSDM 571
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 143/327 (43%), Gaps = 37/327 (11%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM-LMSRGL-SVKV 196
P + ++ L+ Y + G L ++ +E+ E D+ ++ RGL SV
Sbjct: 320 PNIAVYNSLIDAYCKVGDVSEAMALFLE-------LERFEVSPDVFTYSILIRGLCSVSR 372
Query: 197 STCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV--------VRVRPNVH 248
+ I+E +G+++ Y + D GK K + V PNV
Sbjct: 373 TEEAGNIFEKMTKEGILANSVTYNSLI----DGCCKEGKMDKALEICSQMTENGVEPNVI 428
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
TF+ L+ G+ + + ++ EM PD +Y+ ++ C+ M+EA KL+ +M
Sbjct: 429 TFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDM 488
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-------------GLSGVESSSVTF 355
D + + + ++ G C+ G+++ A E F E G ++ V +
Sbjct: 489 LDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAY 548
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C+ G A+ +++DM R G +P+ V++ L + + L +L A ++
Sbjct: 549 TALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI---LMMLHADML 605
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEA 442
KFG+ P ++ L + E G ++ A
Sbjct: 606 KFGVIPNSAVHVILCECYQESGFLKSA 632
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 133/507 (26%), Positives = 229/507 (45%), Gaps = 49/507 (9%)
Query: 14 SKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS---GLT 70
+ P P L SQ + PPS H L+ +V S+L++ S + C+ L+
Sbjct: 95 AAPHPPSPLPSQ-----NQPPS-SDHALLKSVTSILSNPSLDS------TQCKQLIPHLS 142
Query: 71 PTQFSQIALGLKNN--PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDV- 127
P QF + ++ N P AL FF F + +L SY ++ L + + PAR +
Sbjct: 143 PHQFDSVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLL 202
Query: 128 IRVALRSPE---NDPKLKLFEVL-----VKTYRECGSAPFVFDLLIKC-CLEVKNIEKIE 178
IR+ R DPK + E+ + E G A DLLI C + +N+
Sbjct: 203 IRLIDRKLPVLFGDPKNRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNV-GFR 261
Query: 179 TCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE----------VFGLDSD 228
+ + R L ++G+ V TC L+ + + + Y ++ +F +
Sbjct: 262 NAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAIN 321
Query: 229 ATAGIGK---------DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
A GK D++++ V PNV T+N L+ G + G ++ +M + G
Sbjct: 322 AFCKGGKVEDAIQLFFDMEKL-GVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVN 380
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
+YSVL+ + + EA + +E +K + V YNT+I G+C++G + A
Sbjct: 381 ATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRI 440
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+M G+ +SVT ++ G+C+ G ++ A + +M +GF +I LC
Sbjct: 441 RGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCM 500
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
R AL L+ +++ + P + L+ GLC+EGK +A+++ ++ KGF +L
Sbjct: 501 NSRFESALRFLREMLLR-NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLV 559
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFE 486
+A I G K GN++ A L K+M E
Sbjct: 560 TTNALIHGLCKTGNMQEAVRLLKKMLE 586
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 125/236 (52%), Gaps = 1/236 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N L+ G +EG E+ + EM + G EPD ++Y++L+ C ++ EA LW E
Sbjct: 595 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC 654
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ +++ +V Y +I G+C+ ++ E+ F E+ +E +SV + L+ YCR G+
Sbjct: 655 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 714
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A +++DM KG P +T LI +C+ R+ +A L + K GL P Y
Sbjct: 715 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA-KCLIDEMRKEGLLPNVVCYTA 773
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LI G C+ G+M++ + V EM P+ Y+ IDGY K G+++ A L EM
Sbjct: 774 LIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM 829
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 154/308 (50%), Gaps = 17/308 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++ V +++ ++ RG + T N LI + V G+++ E+
Sbjct: 573 NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM------------- 619
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
VK+ + P+ T+N L+ G R G ++ ++W E P+ Y+Y V++ +C+
Sbjct: 620 -VKQ--GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKA 676
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
++ E EKL+ E+ +N+E + V YNT+I +C G A + +M G+ ++ T+
Sbjct: 677 DKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATY 736
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C G ++ A + ++M ++G P LIG C ++ + +++L+ +
Sbjct: 737 SSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQ-EMS 795
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ + P + +Y +I G + G M+ A K+ EMVGKG P Y+ +G+ KEG +E
Sbjct: 796 SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 855
Query: 476 MATMLRKE 483
+L ++
Sbjct: 856 EGKLLAED 863
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN T N+++ GF + G E+ E + EM G + +++ ++ C R A
Sbjct: 449 INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESAL 508
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EM +N+ + T++GG C+ G+ + A E + + G ++ VT L++G
Sbjct: 509 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGL 568
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G++ A+ + M +GF + T LI C + +V E L+ +VK G+ P
Sbjct: 569 CKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFK-LRGEMVKQGIEPD 627
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI G+C GK++EA+ + E + P++ Y IDGY K +E L
Sbjct: 628 TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFT 687
Query: 483 EMFENQV 489
E+ +
Sbjct: 688 ELLTQNL 694
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 134/311 (43%), Gaps = 17/311 (5%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
I ++E I+ ++SRG S+ +I + S RE+
Sbjct: 466 IGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML---------- 515
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
+ +RPN L+ G +EG ++W + G + + + L+ C
Sbjct: 516 ------LRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLC 569
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ M+EA +L ++M ++ D + YNT+I G C+ G++ + EM G+E +
Sbjct: 570 KTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 629
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ L++G CR G +D A+ ++N+ + P T V+I C ++ E + L
Sbjct: 630 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG-EKLFTE 688
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
++ L Y LI+ C G EA K+ +M KG P+ YS+ I G G
Sbjct: 689 LLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGR 748
Query: 474 VEMATMLRKEM 484
+E A L EM
Sbjct: 749 MEDAKCLIDEM 759
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 133/507 (26%), Positives = 229/507 (45%), Gaps = 49/507 (9%)
Query: 14 SKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS---GLT 70
+ P P L SQ + PPS H L+ +V S+L++ S + C+ L+
Sbjct: 28 AAPHPPSPLPSQ-----NQPPS-SDHALLKSVTSILSNPSLDS------TQCKQLIPHLS 75
Query: 71 PTQFSQIALGLKNN--PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDV- 127
P QF + ++ N P AL FF F + +L SY ++ L + + PAR +
Sbjct: 76 PHQFDSVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLL 135
Query: 128 IRVALRSPE---NDPKLKLFEVL-----VKTYRECGSAPFVFDLLIKC-CLEVKNIEKIE 178
IR+ R DPK + E+ + E G A DLLI C + +N+
Sbjct: 136 IRLIDRKLPVLFGDPKNRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNV-GFR 194
Query: 179 TCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE----------VFGLDSD 228
+ + R L ++G+ V TC L+ + + + Y ++ +F +
Sbjct: 195 NAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAIN 254
Query: 229 ATAGIGK---------DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
A GK D++++ V PNV T+N L+ G + G ++ +M + G
Sbjct: 255 AFCKGGKVEDAIQLFFDMEKL-GVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVN 313
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
+YSVL+ + + EA + +E +K + V YNT+I G+C++G + A
Sbjct: 314 ATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRI 373
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+M G+ +SVT ++ G+C+ G ++ A + +M +GF +I LC
Sbjct: 374 RGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCM 433
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
R AL L+ +++ + P + L+ GLC+EGK +A+++ ++ KGF +L
Sbjct: 434 NSRFESALRFLREMLLR-NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLV 492
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFE 486
+A I G K GN++ A L K+M E
Sbjct: 493 TTNALIHGLCKTGNMQEAVRLLKKMLE 519
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 125/236 (52%), Gaps = 1/236 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N L+ G +EG E+ + EM + G EPD ++Y++L+ C ++ EA LW E
Sbjct: 528 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC 587
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ +++ +V Y +I G+C+ ++ E+ F E+ +E +SV + L+ YCR G+
Sbjct: 588 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 647
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A +++DM KG P +T LI +C+ R+ +A L + K GL P Y
Sbjct: 648 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA-KCLIDEMRKEGLLPNVVCYTA 706
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LI G C+ G+M++ + V EM P+ Y+ IDGY K G+++ A L EM
Sbjct: 707 LIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM 762
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 150/300 (50%), Gaps = 17/300 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++ V +++ ++ RG + T N LI + V G+++ E+
Sbjct: 506 NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM------------- 552
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
VK+ + P+ T+N L+ G R G ++ ++W E P+ Y+Y V++ +C+
Sbjct: 553 -VKQ--GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKA 609
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
++ E EKL+ E+ +N+E + V YNT+I +C G A + +M G+ ++ T+
Sbjct: 610 DKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATY 669
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C G ++ A + ++M ++G P LIG C ++ + +++L+ +
Sbjct: 670 SSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQ-EMS 728
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ + P + +Y +I G + G M+ A K+ EMVGKG P Y+ +G+ KEG +E
Sbjct: 729 SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 788
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN T N+++ GF + G E+ E + EM G + +++ ++ C R A
Sbjct: 382 INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESAL 441
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EM +N+ + T++GG C+ G+ + A E + + G ++ VT L++G
Sbjct: 442 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGL 501
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G++ A+ + M +GF + T LI C + +V E L+ +VK G+ P
Sbjct: 502 CKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFK-LRGEMVKQGIEPD 560
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI G+C GK++EA+ + E + P++ Y IDGY K +E L
Sbjct: 561 TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFT 620
Query: 483 EMFENQV 489
E+ +
Sbjct: 621 ELLTQNL 627
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 134/311 (43%), Gaps = 17/311 (5%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
I ++E I+ ++SRG S+ +I + S RE+
Sbjct: 399 IGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML---------- 448
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
+ +RPN L+ G +EG ++W + G + + + L+ C
Sbjct: 449 ------LRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLC 502
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ M+EA +L ++M ++ D + YNT+I G C+ G++ + EM G+E +
Sbjct: 503 KTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 562
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ L++G CR G +D A+ ++N+ + P T V+I C ++ E + L
Sbjct: 563 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG-EKLFTE 621
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
++ L Y LI+ C G EA K+ +M KG P+ YS+ I G G
Sbjct: 622 LLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGR 681
Query: 474 VEMATMLRKEM 484
+E A L EM
Sbjct: 682 MEDAKCLIDEM 692
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 125/274 (45%), Gaps = 20/274 (7%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
F ++LLI + I K++ V++ SR L V T +I + + G ++
Sbjct: 562 FTYNLLIH---GMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 618
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+ E+ + N +N L+ + R G + + +M G
Sbjct: 619 FTELL----------------TQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGI 662
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P +YS L+ C RM +A+ L +EMR + + +VV Y +IGG+C++G+M +
Sbjct: 663 PPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVN 722
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
+EM + + +T+ +++GY ++GD+ +A + ++M KG P+ T VL C
Sbjct: 723 VLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC 782
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+ ++ E I + + GL E +Y L+ G
Sbjct: 783 KEGKIEEGFKICD-YMSQEGLPLDEITYTTLVHG 815
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG-- 232
+KIE + L+++ L + N LI R + ++++ ++ T
Sbjct: 610 DKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATY 669
Query: 233 ---------IGK--------DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
IG+ D R + PNV + AL+ G+ + G +KV +V EM+
Sbjct: 670 SSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSS 729
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
P+ +Y+V++ + + M+ A KL EM K + D V YN + GFC+ G++
Sbjct: 730 YDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEE 789
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGY 362
+ M G+ +T+ LV+G+
Sbjct: 790 GFKICDYMSQEGLPLDEITYTTLVHGW 816
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN T+ ++ G+ + G + + EM G PD +Y+VL FC+E ++ E
Sbjct: 732 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGF 791
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
K+ + M + + D + Y T++ G+ + + E
Sbjct: 792 KICDYMSQEGLPLDEITYTTLVHGWQQPSALTNQE 826
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 195/392 (49%), Gaps = 22/392 (5%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+H+ SY ++HIL AR+ A ++++ + S P +FE+L T C VF
Sbjct: 6 RHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEILWTTRNVCVPGFGVF 65
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR-GKGVISGYEIYR 220
D L +E+ +E C +RM R L K +CNA + +S+ G+G +S + +R
Sbjct: 66 DALFSVLVELGMLEAAGQC--FLRMTKFRVLP-KARSCNAFLHRLSKAGEGDLS-RDFFR 121
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
++ G AGI P V T+N ++ +EG ++ +M ++G P
Sbjct: 122 DMVG------AGIA----------PTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTP 165
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D +Y+ L+ + + + E+ L+EEM+ E DV+ YN +I FC+ M RA EFF
Sbjct: 166 DIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFF 225
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
REM ++ + +++ L++ C+ G + AI + DM R G P T LI C
Sbjct: 226 REMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKA 285
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+ EA +L +++ + +Y L+ GLCEEG M EA ++ M G P+L+
Sbjct: 286 GNLGEAF-MLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQA 344
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
Y+A I G++K +++ A L EM E ++ +
Sbjct: 345 YTALIHGHIKVRSMDKAMELFNEMREKDIKPD 376
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 124/245 (50%), Gaps = 1/245 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
V N+ T+ L+ G EG + E+++ M + G P+ +Y+ L+ + R M +A
Sbjct: 302 HVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKA 361
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L+ EMR+K+++ D++ + TI+ G C ++ + EM SG+ ++ V + L++
Sbjct: 362 MELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDA 421
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
Y +AG+ AI + +M G E T LI LC + V EA+ R+ L P
Sbjct: 422 YFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYF-GRMPDHDLQP 480
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y LI GLC+ + +A K+ EM K P Y+A IDG +K GN + A +R
Sbjct: 481 NVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMR 540
Query: 482 KEMFE 486
+M E
Sbjct: 541 NKMME 545
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 112/242 (46%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN+ + AL+ G + + +K +++ EM +PD + ++ C E ++ E +
Sbjct: 338 VTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECK 397
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EM++ + + V Y T++ + + G A EM G E + VTF L++G
Sbjct: 398 IIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGL 457
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G V AI + M +P + LI LC + +A + K + P
Sbjct: 458 CKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDK-NMIPD 516
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ +Y +I G + G +EAL ++ +M+ G E L Y++ + G + G V+ A
Sbjct: 517 KIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLA 576
Query: 483 EM 484
EM
Sbjct: 577 EM 578
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 160/369 (43%), Gaps = 20/369 (5%)
Query: 61 LLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKH---SLSSYATIIHILSR 117
+ + R GL P +F+ +L N L + L +H ++ +Y T++ L
Sbjct: 260 FVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCE 319
Query: 118 ARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIE-K 176
++ A ++ R A+ P L+ + L+ + + S +L + + K+I+
Sbjct: 320 EGMMNEAEELFR-AMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNE--MREKDIKPD 376
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
I IV L S K+ C ++ E+ + G+ + IY + +D+ AG +
Sbjct: 377 ILLWGTIVWGLCSES---KLEECKIIMTEM-KESGIGANPVIYTTL--MDAYFKAGNRTE 430
Query: 237 V------KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
R + V TF AL+ G + G ++ + M +P+ Y+ L+
Sbjct: 431 AINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALID 490
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C+ + +A+KL++EM+DKN+ D +AY +I G + G A +M G+E
Sbjct: 491 GLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIEL 550
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ LV G + G V A +M KG P+ + L+ + + + EA++ L
Sbjct: 551 DLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIE-L 609
Query: 411 KARVVKFGL 419
+ +V+ GL
Sbjct: 610 QNELVEKGL 618
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 161/325 (49%), Gaps = 20/325 (6%)
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
LI+C + +K + +V +++ RG +V V N ++ + R GV + RE
Sbjct: 115 LIEC---FADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIRE-- 169
Query: 224 GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
+G+ V P++ ++N L+ G + ++ + +EM GC P+
Sbjct: 170 ---------MGRK-----SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSV 215
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+ + LM C++ RM EA +L E M+ K + DVV Y T+I GFC G + R +E F EM
Sbjct: 216 TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 275
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G+ ++ VT+ LV+G CR G A V N M G P+ T LI LC R
Sbjct: 276 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 335
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
A+D+L V K G P+ +Y L+ GLC+EG + +A K+ M+ KG + + Y+
Sbjct: 336 THAMDLLNLMVEK-GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNT 394
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQ 488
+ G +G V+ A L MF+N+
Sbjct: 395 LMKGLCDKGKVDEALKLFNSMFDNE 419
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 3/250 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N L+ G +EG + M G + D +Y+ LM C++ ++ EA KL
Sbjct: 352 PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL 411
Query: 305 WEEMRDKN--VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ M D +E +V +N +IGG C+ G + +A + R+M G + VT+ L+ G
Sbjct: 412 FNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGC 471
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+AG + A+ ++ + GF P T +LI C K R+ L + GL P
Sbjct: 472 LKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC-KMRMLNIAKGLFCEMRTHGLNPA 530
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y L+ LC+EG +E+A + EM EP + ++ IDG +K G+ + L+
Sbjct: 531 LFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQM 590
Query: 483 EMFENQVRQE 492
+M E +R +
Sbjct: 591 KMVEMGLRPD 600
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 138/292 (47%), Gaps = 22/292 (7%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG----LDSDA------TAG 232
I+RM++ +G V T N L+ + V +++ +F L+ + G
Sbjct: 376 ILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGG 435
Query: 233 IGKD--VKRVVRVR---------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
+ K+ + + V++ N+ T+N L+ G + G ++ ++W ++ LG P+
Sbjct: 436 LCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPN 495
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
++YS+L+ FC+ R + A+ L+ EMR + + YNT++ C+ G + +A+ F+
Sbjct: 496 SFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQ 555
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EMG + E ++F +++G +AGD + M G P+ T LI L
Sbjct: 556 EMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLG 615
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ EA L+ R+V G P Y L+KGL +G E + + +M KG
Sbjct: 616 ELDEAKSALE-RMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 666
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 21/280 (7%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKV 196
D LKLF + F F++LI C E ++ V I R ++ +G +
Sbjct: 406 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKE----GRLTKAVKIHRKMVKKGSCGNL 461
Query: 197 STCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVG 256
T N L+ + + E++++V L PN T++ L+ G
Sbjct: 462 VTYNMLLGGCLKAGKIKEAMELWKQVLDLG----------------FVPNSFTYSILIDG 505
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
F + + ++ EM G P + Y+ LMA C+E + +A+ L++EM + N E D
Sbjct: 506 FCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPD 565
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
++++NT+I G + G+ +E +M G+ ++TF L+N + G++D A
Sbjct: 566 IISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALE 625
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
M GF P+ + L+ L K E +++L K
Sbjct: 626 RMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 665
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 1/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T N L+ R + V+ M + P S S L+ F + ++ + +
Sbjct: 72 PSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGV 131
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + +V N ++ G C G + A REMG V V++ L+NG C+
Sbjct: 132 VGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCK 191
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A + A+ + +M G P T L+ LC R+ EA+++L+A + K G
Sbjct: 192 AKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEA-MKKKGFDADVV 250
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G C G ++ ++ EM+GKG ++ YS + G + G + A + M
Sbjct: 251 LYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAM 310
Query: 485 FENQVRQE 492
E+ + +
Sbjct: 311 AEHGIHPD 318
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 84/223 (37%), Gaps = 34/223 (15%)
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ EA L+ D N+ N ++ A +R M V S +
Sbjct: 54 QFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLS 113
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL------ 410
L+ + A V + ++GF + +++ LC VFEA+ ++
Sbjct: 114 ALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRK 173
Query: 411 -----------------KARVVK-----------FGLFPTEKSYMFLIKGLCEEGKMEEA 442
KA+ +K G FP + L+ GLC++G+M+EA
Sbjct: 174 SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEA 233
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+++ M KGF+ + +Y I G+ GN++ L EM
Sbjct: 234 MELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEML 276
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 224/484 (46%), Gaps = 37/484 (7%)
Query: 18 PKPQLLSQFSTS----SSTPPSDQSHNLIATVVSLLTHH-------RSKSRWNHLLSLCR 66
P+ L +FSTS ++ P D S + + HH R + +L
Sbjct: 29 PRRCLSVKFSTSLGSSNARPFPDYSPRKPSVTDTDFVHHISTTIKQRRAEPFRRILKPFE 88
Query: 67 SGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARD 126
S P + + ++++ L L FF + + + SL S ++ I ++ + A
Sbjct: 89 SKFRPDHLIWVLMSIRDDYKLVLDFFDWARLRR--DPSLESLCIVVQIAVASKDLRMAHR 146
Query: 127 VIRVALRSPENDPKL---KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDI 183
++ P D + E L+ TY++ G+ P VFD+ + +E + + D
Sbjct: 147 LVFEFWEKPHLDVGNSFDRFTERLIYTYKDWGAHPLVFDVFFQVLVEAGLLLEAGKLFD- 205
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSRG-KGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
L++ G+ V V +CN + +S G+ + + ++RE V
Sbjct: 206 --KLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREY----------------SEVG 247
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V N ++N ++ + G ++ + ++M G PD SYSV++ +C+ ++ +
Sbjct: 248 VCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVL 307
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL EE++ K ++ + YN+II C+ G + AE+ R M + +V + L++G+
Sbjct: 308 KLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGF 367
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
++G+V ++++M RK P+ T +I LC +V EA + + K GL P
Sbjct: 368 GKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSK-GLKPD 426
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E +Y LI G C+ G+M+EA + +MV KG P++ Y+A +DG K G V++A L
Sbjct: 427 EVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLH 486
Query: 483 EMFE 486
EM E
Sbjct: 487 EMSE 490
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 189/403 (46%), Gaps = 16/403 (3%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
L+ Q K L K + +Y +II L + + A V+RV +++ P ++ L
Sbjct: 306 VLKLMEELQRKGL-KPNQYTYNSIISFLCKTGRVVEAEQVLRV-MKNQRIFPDNVVYTTL 363
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
+ + + G+ + L E+K + + V M+ + KV L E+
Sbjct: 364 ISGFGKSGNVSVEYKLFD----EMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM- 418
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDV----KRVVR--VRPNVHTFNALMVGFYREG 261
KG+ Y + +D AG K+ ++V + PNV T+ AL+ G + G
Sbjct: 419 LSKGLKPDEVTYTAL--IDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCG 476
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ ++ EM+ G +P+ +Y+ L+ C+ + +A KL EEM D + Y
Sbjct: 477 EVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYT 536
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
TI+ +C++GEMA+A E R M G++ + VTF L+NG+C +G ++ + M K
Sbjct: 537 TIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDK 596
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G P +T L+ + C + + ++I K + G+ P +Y LIKG C+ M+E
Sbjct: 597 GIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQ-GVVPDTNTYNILIKGHCKARNMKE 655
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
A + EMV KGF + Y++ I G+ K E A L +EM
Sbjct: 656 AWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEM 698
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 184/402 (45%), Gaps = 39/402 (9%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
A R F +C +++S Y I+H+L + + A ++ + + N P + + V+
Sbjct: 236 AFRVFREYSEVGVCWNTVS-YNIILHLLCQLGKVKEAHSLL-IQMEFRGNVPDVVSYSVI 293
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
V Y + +E++ + ++ L +GL T N++I +
Sbjct: 294 VDGYCQ--------------------VEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLC 333
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
+ V+ ++ R V + R+ P+ + L+ GF + G
Sbjct: 334 KTGRVVEAEQVLR----------------VMKNQRIFPDNVVYTTLISGFGKSGNVSVEY 377
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
++ EM R PD +Y+ ++ C+ ++ EA KL+ EM K ++ D V Y +I G+
Sbjct: 378 KLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGY 437
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ GEM A +M G+ + VT+ LV+G C+ G+VD A + ++M KG +P
Sbjct: 438 CKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNV 497
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI LC + +A+ +++ + G FP +Y ++ C+ G+M +A ++
Sbjct: 498 CTYNALINGLCKVGNIEQAVKLMEEMDLA-GFFPDTITYTTIMDAYCKMGEMAKAHELLR 556
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
M+ KG +P++ ++ ++G+ G +E L K M + +
Sbjct: 557 IMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGI 598
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 122/244 (50%), Gaps = 1/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV T+NAL+ G + G E+ + EM G PD +Y+ +M +C+ M +A
Sbjct: 493 LQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAH 552
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L M DK ++ +V +N ++ GFC G + E + M G+ ++ TF L+ Y
Sbjct: 553 ELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQY 612
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C ++ + I +Y M +G P+ +T +LI C R + EA L +V+ G T
Sbjct: 613 CIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAW-FLHKEMVEKGFSLT 671
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY LIKG + K EEA K+ EM GF EIY F+D +EGN E L
Sbjct: 672 AASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCD 731
Query: 483 EMFE 486
E E
Sbjct: 732 EAIE 735
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 95/209 (45%), Gaps = 32/209 (15%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
+++R+++ +GL + T N L+ +G+ +G+ +D +R++
Sbjct: 553 ELLRIMLDKGLQPTIVTFNVLM----------NGF------------CMSGMLEDGERLI 590
Query: 242 R------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ + PN TFN+LM + +++ M G PD +Y++L+ C+
Sbjct: 591 KWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKA 650
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R M+EA L +EM +K +YN++I GF + + A + F EM G + +
Sbjct: 651 RNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIY 710
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
+ V+ G+ ++ + ++C + E
Sbjct: 711 DIFVDVNYEEGNWENTL----ELCDEAIE 735
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 227/485 (46%), Gaps = 30/485 (6%)
Query: 28 TSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLK-NNPH 86
++ ++ P+D ++ + L + SK W H S L Q QI L L+ +N
Sbjct: 40 SADASIPNDAVRQIL---IGLRSFGASKFLWGHHFQTLASVLNTHQVDQILLSLRVDNSD 96
Query: 87 LALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEV 146
AL F +++ +HS S+ + H+++R R V+ + + L E+
Sbjct: 97 SALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCEL 156
Query: 147 LVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
L ++R+ V+D+L C E + + ++ + L V ++T N+L++ +
Sbjct: 157 LCNSFRDWDLNNVVWDML-ACAYS--RAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL 213
Query: 207 SRGKGVISGYEIYREVFG-------------LDSDATAGIGKDVKRVVR------VRPNV 247
R ++ +++Y E+ +D +D +R P+V
Sbjct: 214 -RHTDIM--WDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSV 270
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
+FNALM GF + G+ + + + M + G PD YSY++L+ C M EA + +
Sbjct: 271 VSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTND 330
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M + VE D+V YN + GF +G ++ A + + M L+G+ VT+ L+ G+C+ G+
Sbjct: 331 MENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGN 390
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
++ + + M +G + T VL+ LC R+ EA+ +L V GL P +Y
Sbjct: 391 IEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEV-IGLKPDLLTYS 449
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
LI GLC+ G +EEA+++ EM K P+ + SA I G ++G + A M + ++
Sbjct: 450 VLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKS 509
Query: 488 QVRQE 492
V +E
Sbjct: 510 DVAEE 514
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 120/243 (49%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ ++ T+ L+ + G ++ + EM +G +PD +YSVL+ C+ + EA
Sbjct: 406 LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAI 465
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+EEM K + + + II G E G ++ A+ +F + S V + + +++GY
Sbjct: 466 ELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGY 525
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G++ A+ Y + KG P T LI C K ++ EA+ +L V GL PT
Sbjct: 526 AKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVH-GLVPT 584
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G CEEG M + EM K +P+ Y+ + G KEG + + L K
Sbjct: 585 SVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLK 644
Query: 483 EMF 485
M+
Sbjct: 645 YMY 647
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 135/249 (54%), Gaps = 1/249 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ PN +A++ G + +GA + + + + + + Y++++ + + + EA
Sbjct: 475 RIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEA 534
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ ++++ +K + +V +N++I GFC+ G++A A + + + G+ +SVT+ L+NG
Sbjct: 535 VRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNG 594
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC GD+ S + ++M K +P T V++ LC + R+ E++ +LK + GLFP
Sbjct: 595 YCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYAR-GLFP 653
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ +Y +I+ C+ +++A ++ +M+ +PS Y+ I+G GN++ A L
Sbjct: 654 DQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLL 713
Query: 482 KEMFENQVR 490
+ + +R
Sbjct: 714 VTLQDQSIR 722
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 145/310 (46%), Gaps = 22/310 (7%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE------------VFG 224
+E +++ + S+ + C+A+I + KG IS ++Y + ++
Sbjct: 461 VEEAIELYEEMCSKRIYPNSFVCSAIISGLFE-KGAISEAQMYFDSVTKSDVAEEIILYN 519
Query: 225 LDSDATAGIG------KDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+ D A +G + K+++ + P + TFN+L+ GF ++G + + +
Sbjct: 520 IMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVH 579
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G P +Y+ LM +CEE M + EM K ++ + Y ++ G C+ G + +
Sbjct: 580 GLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHES 639
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ + M G+ +T+ ++ +C+A D+ A ++N M + +P T VLI
Sbjct: 640 VQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLING 699
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC + +A D L + + T+ +Y +IK C +G ++ AL +MV +GFE
Sbjct: 700 LCVYGNLKDA-DRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEV 758
Query: 457 SLEIYSAFID 466
S+ YSA I+
Sbjct: 759 SIRDYSAVIN 768
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 94/214 (43%), Gaps = 1/214 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P T+ ++ G +EG + + M G PD +Y+ ++ FC+ +++A
Sbjct: 616 IKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAF 675
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L +M +++ V YN +I G C G + A+ + + + V + ++ +
Sbjct: 676 QLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAH 735
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C GDV +A++ ++ M +GFE +I LC KR + ++ G+ P
Sbjct: 736 CAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLC-KRNLITDAKFFFCMMLTHGIPPD 794
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+ + ++ G ++ A M+ G P
Sbjct: 795 QDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 194/418 (46%), Gaps = 35/418 (8%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH+L +++ A+ +I+V + +F +++T S
Sbjct: 7 STFRHTLDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+VF LI LE + C + R V TC ++ + + K +
Sbjct: 67 YVFSGLITAYLESGFLRDAIECYRLTR---EHKFWVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 219 YREVF----------------GLDSDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYR 259
Y E+ D + + V + +RP+V +FN LM G+ R
Sbjct: 124 YEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIR 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM DK + + V
Sbjct: 184 LGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G CR GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
KG +P+ T LI C D FE + R+++ + + Y LI GLC+E
Sbjct: 304 MKGLKPDKITYTTLIDGXCKEGDLETAFEH----RKRMIQENIQLDDVGYTALISGLCQE 359
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
G+ +A KV EM+ G +P Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 360 GRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G R+G ++ D+ EM+ G +PD +Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N++ D V Y +I G C+ G AE+ REM G++ ++T+ ++N +
Sbjct: 332 EHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + + +M R G P
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGQMP 414
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + R + ++ +D + G+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + M + + D Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ D + Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSVVT 418
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 227/472 (48%), Gaps = 30/472 (6%)
Query: 18 PKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQI 77
P+P F S PS +L+ V + L R + +L S P+ +
Sbjct: 32 PRP-----FPDYSPRNPSISDTDLVRRVTTTL-KRRHLEPFRRVLKPYESRFKPSHLIWV 85
Query: 78 ALGLKNNPHLALRFFSFTQHKSLCKH--SLSSYATIIHILSRARLIGPARDVIRVALRSP 135
+ LKN+ L L F++ + +S + +L S ++H+ + I A+ ++ P
Sbjct: 86 LINLKNDYPLVLNLFNWAKSQSQQQFHPTLESLCIVVHLSVASNDIQTAKRLVFEFCAKP 145
Query: 136 END--PKLKLF-EVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGL 192
+ D LF E+L+ TY++ GS P VFDL + +E + + + + L+ G+
Sbjct: 146 KIDVSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVENGFVLEAQ---KLFHKLLRYGV 202
Query: 193 SVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNA 252
V V +CN + SR G +I +VF + +G V N + N
Sbjct: 203 VVSVDSCNLFL---SRLSCNFEGIKIAVKVF----EEFPELG--------VCWNTVSCNI 247
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
++ + G + ++ V+M G PD SY V+++ +C + + KL +E++ K
Sbjct: 248 VLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKG 307
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
++ D YN II C+ GE+ AE+ R M GV +V + +++G+C+ G+V +A
Sbjct: 308 LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAAC 367
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
++++M RK P+ T +I +C ++ EA ++ +VK GL P E +Y LI G
Sbjct: 368 KLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVK-GLEPDEVTYTALIDG 426
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
C+ G+M+EA V +MV KG P++ Y+A DG K G +++A L EM
Sbjct: 427 YCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEM 478
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 132/248 (53%), Gaps = 1/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ + +N +++ + G + E + M + G PD Y+ +++ FC+ + A
Sbjct: 308 LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAAC 367
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL++EMR K + D+V Y ++I G C+ G+M A E F EM + G+E VT+ L++GY
Sbjct: 368 KLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGY 427
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+AG++ A V+N M +KG P T L LC + A ++L K GL P
Sbjct: 428 CKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRK-GLQPN 486
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y ++ GLC+ G +E+ +K+ EM GF P Y+ +D Y K G + A L +
Sbjct: 487 VYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLR 546
Query: 483 EMFENQVR 490
M +++
Sbjct: 547 IMLNKRLQ 554
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 124/242 (51%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV T+ AL G + G + ++ EM+R G +P+ Y+Y+ ++ C+ + +
Sbjct: 448 LTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTV 507
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL EEM D + Y T++ +C++GEMA+A E R M ++ + VTF L+NG+
Sbjct: 508 KLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGF 567
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +G ++ + M KG P +T L+ + C K + +I KA + G+ P
Sbjct: 568 CMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDR-GVMPD 626
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LIKG C+ M+EA + EMV KG+ + Y A I G+ K A L +
Sbjct: 627 SNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFE 686
Query: 483 EM 484
EM
Sbjct: 687 EM 688
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 130/259 (50%), Gaps = 1/259 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D R ++ P++ T+ +++ G + G + +++ EM G EPD +Y+ L+ +C+
Sbjct: 371 DEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKA 430
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
M+EA + +M K + +VV Y + G C+ GE+ A E EM G++ + T+
Sbjct: 431 GEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTY 490
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+VNG C+ G+++ + + +M GF P+ T L+ C + +A ++L+ +
Sbjct: 491 NTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLN 550
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K L PT ++ L+ G C G +E+ ++ M+ KG P+ +++ + Y + N+
Sbjct: 551 K-RLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMR 609
Query: 476 MATMLRKEMFENQVRQEDG 494
T + K M + V +
Sbjct: 610 ATTEIYKAMHDRGVMPDSN 628
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 118/241 (48%), Gaps = 1/241 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV+T+N ++ G + G E+ + EM G PD +Y+ LM +C+ M +A
Sbjct: 483 LQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAH 542
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L M +K ++ +V +N ++ GFC G + E M G+ ++ TF L+ Y
Sbjct: 543 ELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQY 602
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C ++ + +Y M +G P+ +T +LI C R + EA L +V+ G T
Sbjct: 603 CIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAW-FLHKEMVEKGYSVT 661
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI+G + K EA K+ EM G +IY F+D +EGN E+ L
Sbjct: 662 AATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCD 721
Query: 483 E 483
E
Sbjct: 722 E 722
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R++P + TFN LM GF G E E + M G P+ +++ LM +C + MR
Sbjct: 552 RLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRAT 611
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++++ M D+ V D YN +I G C+ M A +EM G ++ T++ L+ G
Sbjct: 612 TEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRG 671
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG------------ELCDK 400
+ + A ++ +M + G E ++ + ELCD+
Sbjct: 672 FYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDE 722
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 226/505 (44%), Gaps = 47/505 (9%)
Query: 23 LSQFSTSSSTPPSDQSHNLIATVVSLL----THHRSKSRWNHLLSLCRSGLTPTQFSQIA 78
L FS+ S P D H+L+ + + T H N L LTP S++
Sbjct: 33 LLPFSSWSHFPYKD--HDLLCEISEAINDSETKHEKGYSENPRLKRILPSLTPRHVSKLI 90
Query: 79 L--GLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPE 136
L P L FF+ + +H+L SY T++H L R++ A ++ +
Sbjct: 91 TLNPLCLPPSSLLSFFNHLASRPPFRHTLHSYCTMLHFLCLHRMLPQAHSLVSFLVSRKG 150
Query: 137 NDPKLKLFEVLVKTY----RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGL 192
+ LF +++T S VFD LI ++ C R++
Sbjct: 151 TNSASTLFSSILRTMPRHHHHHHSVGLVFDALISAYVDSGFTPDAVQC---FRLVTKNKF 207
Query: 193 SVKVSTCNALIWEVSRGKGV--ISGYEIYREVFGLDSDATAGI------------GKDV- 237
V + C L+ V R + V + +Y EV LDS I DV
Sbjct: 208 PVPIRGCENLLRRVVRLRPVEIERSWALYLEV--LDSGYPPKIYFFNVLMHGFCKAGDVG 265
Query: 238 -KRVV-------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
R+V +RP V +FN L+ G + G E+ + M G PD +++S L+
Sbjct: 266 NARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALI 325
Query: 290 AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
C+E R+ E L++EM + + + V + T+I G C+ G++ A + F+ M GV
Sbjct: 326 NGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVR 385
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
VT+ L+NG C+ GD+ A + N+M G +P+ T LI C + AL+I
Sbjct: 386 PDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEI 445
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
K R+V+ G+ + ++ LI GLC EG++ +A ++ +M+ GF+P Y+ ID +
Sbjct: 446 -KRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFC 504
Query: 470 KEGNVEMATMLRKEMFENQVRQEDG 494
K+G+V+M L KEM Q DG
Sbjct: 505 KKGDVKMGFKLLKEM------QSDG 523
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 101/225 (44%), Gaps = 28/225 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K++ + +M++++G+ + T NALI + + G K
Sbjct: 368 KVDLALKNFQMMLAQGVRPDLVTYNALINGLCK----------------------VGDLK 405
Query: 236 DVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
+ +R+V ++P+ TF L+ G ++G E ++ M G E D +++ L+
Sbjct: 406 EARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALI 465
Query: 290 AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
+ C E R+ +A ++ +M + D Y +I FC+ G++ + +EM G
Sbjct: 466 SGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHV 525
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
VT+ L+NG C+ G + +A ++ + M G P T +L+
Sbjct: 526 PGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILL 570
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F AL+ G REG + +M G +PD +Y++++ FC++ ++ KL +EM+
Sbjct: 461 FTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQ 520
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG--- 366
VV YN ++ G C+ G+M A+ M GV + +T+ L++G+ + G
Sbjct: 521 SDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSV 580
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
DVD ++N KG + ++ L+ E
Sbjct: 581 DVD----IFNS--EKGLVTDYASYTALVNE 604
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ T+ ++ F ++G + + EM G P +Y+ LM C++ +M+ A+
Sbjct: 490 KPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKM 549
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
L + M + V + + YN ++ G + G + F E GL + ++ LVN
Sbjct: 550 LLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFNSEKGLV---TDYASYTALVN 603
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 184/396 (46%), Gaps = 20/396 (5%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+++I++ + D +FE +++ S
Sbjct: 7 STFRHTLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDV 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+VF LI LE + C + R V TC ++ + K +
Sbjct: 67 YVFSGLITAYLESGFLHDALECFRLTR---EHKFWVPFDTCRKVLEHFMKLKYFKLVWGF 123
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
Y+E+ A+ ++ FN LM F +EG + V+ E+ + G
Sbjct: 124 YKEILECGYPAS----------------LYFFNILMHRFCKEGEMRLAQSVFDEITKWGL 167
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P S++ LM + + E +L M V+ DV Y+ +I G C+ +M A E
Sbjct: 168 RPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANE 227
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F EM +G+ + VTF L++G+C+ G +D A+ Y +M R+GF P+ T LI LC
Sbjct: 228 LFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLC 287
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
K + +A D++ +K GL P + +Y LI G C+EG +E AL + M+ +
Sbjct: 288 KKGDLKQAQDLIDEMSMK-GLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDD 346
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
Y+A I G +EG A + +EM ++ ++G
Sbjct: 347 VAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNG 382
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 84/167 (50%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TF L+ G + G+ + + + EM R G PD +Y+ L+ C++ +++A+ L
Sbjct: 239 PNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EM K ++ D + Y T+I G C+ G++ A + + M + V + L++G CR
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCR 358
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
G A + +M G +P+ T ++I E C K V +LK
Sbjct: 359 EGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLK 405
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 77/141 (54%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++ +D+ EM+ G +PD +Y+ L+ C+E + A
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYY 333
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C G+ AE+ REM G++ + T+ ++N +C+
Sbjct: 334 RKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCK 393
Query: 365 AGDVDSAILVYNDMCRKGFEP 385
GDV + + +M R G P
Sbjct: 394 KGDVKTGSKLLKEMQRDGHVP 414
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
I+ ++ + ++ +G S + T N LI+ + + + ++ +D + G+
Sbjct: 257 IDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDL------IDEMSMKGL--- 307
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
+P+ T+ L+ G +EG E M + D +Y+ L++ C E
Sbjct: 308 -------KPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREG 360
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
+ +AEK+ EM ++ D Y II FC+ G++ + +EM G
Sbjct: 361 QSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDG 411
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 187/410 (45%), Gaps = 21/410 (5%)
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF 144
P L FF F H++ SY +++H L R+ A ++ + +F
Sbjct: 90 PKSLLSFFDFLSSYPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVF 149
Query: 145 EVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
+++T + S+ FVFD L+ E + C R+ L + + C L+
Sbjct: 150 ASILET-KGTLSSSFVFDALMSVYTEFGYVSDAIQCF---RLTKKHNLKIPFNGCKCLLE 205
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ + + E Y E+ LDS PNV+TFN LM +EG +
Sbjct: 206 RMIKMSSPMVALEFYLEI--LDSGYP--------------PNVYTFNVLMNRLCKEGKVK 249
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ ++ E+ + G +P S++ L+ +C+ + E +L M + V DV Y+ +I
Sbjct: 250 DAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALI 309
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G C+ ++ A F+EM G+ + VTF L+NG C+ G VD A+ +Y M KG +
Sbjct: 310 DGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLK 369
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
+ LI LC EA + + K GL P + +Y L+ G C+EG +E AL+
Sbjct: 370 ADLVLYNTLIDGLCKGGYFREARKFV-GEMTKRGLIPDKFTYTTLLDGSCKEGDLELALE 428
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
++ EMV +G + ++A I G ++G + A +EM ++ +DG
Sbjct: 429 MRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDG 478
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 132/274 (48%), Gaps = 17/274 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++E + + + RGL T LI + V EIY+++F T G+
Sbjct: 317 QLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMF------TKGLKA 370
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ +N L+ G + G F + EM + G PD ++Y+ L+ C+E
Sbjct: 371 DLV----------LYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKE 420
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ A ++ +EM + ++ D VA+ II G C G++ AE REM +G++ T+
Sbjct: 421 GDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTY 480
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++G+C+ GDV + +M G P T VL+ LC + +V A D+L ++
Sbjct: 481 TMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNA-DMLLNAML 539
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
G+ P + +Y L++G C+ GK+ + V+ EM
Sbjct: 540 NLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM 573
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 15/156 (9%)
Query: 217 EIYREVFGLDSDATAGI-------GK--DVKRVVR------VRPNVHTFNALMVGFYREG 261
E+ +E LD+ A I GK D +R +R ++P+ T+ +M GF ++G
Sbjct: 432 EMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKG 491
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ + EM G P +Y+VLM C++ +++ A+ L M + V D + YN
Sbjct: 492 DVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYN 551
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
++ G C+ G++ + EMGL +S + H
Sbjct: 552 ILLQGHCKHGKLGDFQNVKTEMGLVSDYASYRSLLH 587
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 220/494 (44%), Gaps = 27/494 (5%)
Query: 4 QILKHIIFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLS 63
++ H +FS+ L S+ SS P S + N +VS ++ S +W H
Sbjct: 10 RMASHALFSLRGSHQSFNLSSEPHPSSPLPISSTT-NPFPELVSKISTILSSPKWEHSSE 68
Query: 64 LCR--SGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLI 121
LC L P I L N LRFF + + KH +S + ++++ L R RL
Sbjct: 69 LCHLSPKLKPHHVVNI-LQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLF 127
Query: 122 GPARDVIRVALRSPENDPKLK---LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIE 178
PA V + ++S N+ ++K F + + + G F L+ +++ + ++
Sbjct: 128 APADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLL---IQLGKFDMVD 184
Query: 179 TCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK 238
D+ +++ G+ + T N +I + + V I +F D+
Sbjct: 185 LARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDA----------- 233
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
PN T+ +L++G R + ++ M + GC+P+ +YS L+ C E R+
Sbjct: 234 -----YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EA + EEM K +E V Y + C+ G + A E +M G + TF L
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++G R G + AI +Y+ M G P T LI +LC + R A I K ++ G
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW-MLSHG 407
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
P+ ++Y +IK C G +++A+ + +M+ G P++ Y+ I GY K+GN+ A
Sbjct: 408 SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAM 467
Query: 479 MLRKEMFENQVRQE 492
L + M N ++ +
Sbjct: 468 RLLEIMKGNGLKPD 481
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 183/422 (43%), Gaps = 34/422 (8%)
Query: 74 FSQIALGLKNNPHLALRFFSFTQH-KSLCKHSLSSYATIIHILSRARLIGPARDVIRVAL 132
++ + LG N +L L F F + K C + +Y+T+I+ L + A D++ +
Sbjct: 240 YTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV 299
Query: 133 RSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK-----CCLEVKNIE----------KI 177
+ +P + + + + + + G + +LL K C ++ K
Sbjct: 300 QKGI-EPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKF 358
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
E + + +++ GL T NALI ++ + + I++ + S
Sbjct: 359 EIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS---------- 408
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
P+ T+N ++ F G +K ++ +M + G P+ +Y+ L+ +C++
Sbjct: 409 ------LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A +L E M+ ++ D Y +I GF G++ A F M G+ + VT+
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
+++GY VD A+ ++ M G P T V+I + EA + ++VK
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFC-GKMVKQ 581
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
GL P +Y I GLC G+ A K+ EM + + P+L YS+ I G +EG E A
Sbjct: 582 GLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641
Query: 478 TM 479
M
Sbjct: 642 EM 643
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 150/326 (46%), Gaps = 22/326 (6%)
Query: 155 GSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
GS P ++ +IKC + +I+K D ++ G S V T N LI+ + +
Sbjct: 407 GSLPSTQTYNEIIKCFCLMGDIQKAMVIFD---KMLKAGSSPNVITYNTLIYGYCKQGNL 463
Query: 213 ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
+ + ++ + ++P+ T+ L+ GF R G E ++
Sbjct: 464 NNAMRLL----------------EIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M G P+ +Y+ ++ + ++ +A L+ +M + YN +I GF +
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
++ AE F +M G+ + +T+ ++G CR G A ++++M ++ + P T
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627
Query: 393 LIGELCDKRRVFEA-LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
LI LC + R +A + L AR+ +G P +Y L+KGLC EG+ EA ++ M
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMA 477
KG +PS EIY A + G K VE A
Sbjct: 688 KGLQPSEEIYRALLIGECKNLKVESA 713
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 121/275 (44%), Gaps = 10/275 (3%)
Query: 194 VKVSTCNALIWEVSRGKGVISGYEIYREVFGLD-----SDATAGIGKDVKRVVRVRPNVH 248
KV AL W++ + S + G S+A GK VK+ + PNV
Sbjct: 531 AKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQ--GLLPNVI 588
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE--KLWE 306
T+ + + G R G ++ EM + P+ Y+YS L+ C+E R +AE L
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLA 648
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+ E +V Y T++ G C G A++ M G++ S + L+ G C+
Sbjct: 649 RLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNL 708
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
V+SA+ ++ M GF+ S + LI LC + + EA I + + K E ++
Sbjct: 709 KVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKH-WNSDEVAW 767
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
L+ GL +EG+ + LK+ M + + + Y
Sbjct: 768 TVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 220/494 (44%), Gaps = 27/494 (5%)
Query: 4 QILKHIIFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLS 63
++ H +FS+ L S+ SS P S + N +VS ++ S +W H
Sbjct: 10 RMASHALFSLRGSHQSFNLSSEPHPSSPLPISSTT-NPFPELVSKISTILSSPKWEHSSE 68
Query: 64 LCR--SGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLI 121
LC L P I L N LRFF + + KH +S + ++++ L R RL
Sbjct: 69 LCHLSPKLKPHHVVNI-LQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLF 127
Query: 122 GPARDVIRVALRSPENDPKLK---LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIE 178
PA V + ++S N+ ++K F + + + G F L+ +++ + ++
Sbjct: 128 APADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLL---IQLGKFDMVD 184
Query: 179 TCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK 238
D+ +++ G+ + T N +I + + V I +F D+
Sbjct: 185 LARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDA----------- 233
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
PN T+ +L++G R + ++ M + GC+P+ +YS L+ C E R+
Sbjct: 234 -----YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EA + EEM K +E V Y + C+ G + A E +M G + TF L
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++G R G + AI +Y+ M G P T LI +LC + R A I K ++ G
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW-MLSHG 407
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
P+ ++Y +IK C G +++A+ + +M+ G P++ Y+ I GY K+GN+ A
Sbjct: 408 SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAM 467
Query: 479 MLRKEMFENQVRQE 492
L + M N ++ +
Sbjct: 468 RLLEIMKGNGLKPD 481
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 183/422 (43%), Gaps = 34/422 (8%)
Query: 74 FSQIALGLKNNPHLALRFFSFTQH-KSLCKHSLSSYATIIHILSRARLIGPARDVIRVAL 132
++ + LG N +L L F F + K C + +Y+T+I+ L + A D++ +
Sbjct: 240 YTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV 299
Query: 133 RSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK-----CCLEVKNIE----------KI 177
+ +P + + + + + + G + +LL K C ++ K
Sbjct: 300 QKGI-EPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKF 358
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
E + + +++ GL T NALI ++ + + I++ + S
Sbjct: 359 EIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS---------- 408
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
P+ T+N ++ F G +K ++ +M + G P+ +Y+ L+ +C++
Sbjct: 409 ------LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A +L E M+ ++ D Y +I GF G++ A F M G+ + VT+
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
+++GY VD A+ ++ M G P T V+I + EA + ++VK
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFC-GKMVKQ 581
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
GL P +Y I GLC G+ A K+ EM + + P+L YS+ I G +EG E A
Sbjct: 582 GLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641
Query: 478 TM 479
M
Sbjct: 642 EM 643
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 150/326 (46%), Gaps = 22/326 (6%)
Query: 155 GSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
GS P ++ +IKC + +I+K D ++ G S V T N LI+ + +
Sbjct: 407 GSLPSTQTYNEIIKCFCLMGDIQKAMVIFD---KMLKAGSSPNVITYNTLIYGYCKQGNL 463
Query: 213 ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
+ + ++ + ++P+ T+ L+ GF R G E ++
Sbjct: 464 NNAMRLL----------------EIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M G P+ +Y+ ++ + ++ +A L+ +M + YN +I GF +
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
++ AE F +M G+ + +T+ ++G CR G A ++++M ++ + P T
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627
Query: 393 LIGELCDKRRVFEA-LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
LI LC + R +A + L AR+ +G P +Y L+KGLC EG+ EA ++ M
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMA 477
KG +PS EIY A + G K VE A
Sbjct: 688 KGLQPSEEIYRALLIGECKNLKVESA 713
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 120/275 (43%), Gaps = 10/275 (3%)
Query: 194 VKVSTCNALIWEVSRGKGVISGYEIYREVFGLD-----SDATAGIGKDVKRVVRVRPNVH 248
KV AL W++ + S + G S+A GK VK+ + PNV
Sbjct: 531 AKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQ--GLLPNVI 588
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE--KLWE 306
T+ + + G R G ++ EM + P+ Y+YS L+ C+E R +AE L
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLA 648
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+ E +V Y T++ G C G A++ M G++ S + L+ G C+
Sbjct: 649 RLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNL 708
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
V+SA+ ++ M GF+ S + LI LC + + EA I + + K E +
Sbjct: 709 KVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKH-WNSDEVVW 767
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
L+ GL +EG+ + LK+ M + + + Y
Sbjct: 768 TVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 228/495 (46%), Gaps = 46/495 (9%)
Query: 19 KPQLLSQFST--SSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQ 76
KP L F++ S TPP L S L H S+W H + LTP+ S
Sbjct: 10 KPFKLRTFNSLSHSQTPPFSIPTTLTE---STLLHSIESSQW-HFIEQVAPHLTPSLLSS 65
Query: 77 IALGLKNNPHLALRFFSFTQHKSLCKHSL--SSYATIIHILSRARLIGPARDVIRVALRS 134
L++NP L L S Q+ HSL ++ + I +L R P+ ++I+ + S
Sbjct: 66 TLTTLRHNPQLVLHLLSHLQNHP---HSLDLATSSLAICVLYRLPSPKPSINLIQRLILS 122
Query: 135 PENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSV 194
P + E+ + R +FDLL++ E+K + C +++ +G
Sbjct: 123 PTCTNRTIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIK---EKGFVP 179
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDAT-------------AGIGKDVKRVV 241
+ TCN ++ + + +Y E+F ++ ++ G K K +
Sbjct: 180 NIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFI 239
Query: 242 R------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
V+PNV T+N ++ G G F++ ++ M G EPDCY+Y+ ++ C+E
Sbjct: 240 GHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKE 299
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ EA L +M + + + V YN +I G+C G++ +A + EM G+ +S VT+
Sbjct: 300 GRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTY 359
Query: 356 EHLVNGY---CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDI 409
++ R GD D+ I +M KG P+ T +LI C D +R F LD
Sbjct: 360 NLFIHALFMEGRMGDADNMI---KEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLD- 415
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
+V G+ PT +Y LI L + +M+EA + +++ +G P + +++A IDG+
Sbjct: 416 ---EMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHC 472
Query: 470 KEGNVEMATMLRKEM 484
GN++ A L KEM
Sbjct: 473 ANGNIDRAFQLLKEM 487
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 129/287 (44%), Gaps = 42/287 (14%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+NAL+ G+ +G +K EM G +Y++ + E RM +A+ +
Sbjct: 319 PNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNM 378
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT---------- 354
+EMR+K + D V +N +I G+C G+ RA EM G++ + VT
Sbjct: 379 IKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGK 438
Query: 355 -------------------------FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
F L++G+C G++D A + +M P+ T
Sbjct: 439 RNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEIT 498
Query: 390 IEVLIGELCDKRRVFEA---LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
L+ C + +V EA LD +K R G+ P SY LI G + G M++A +V+
Sbjct: 499 YNTLMQGYCREGKVEEARQLLDEMKRR----GIKPDHISYNTLISGYSKRGDMKDAFRVR 554
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
EM+ GF+P++ Y+A I G K E A L KEM + +D
Sbjct: 555 DEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDD 601
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 117/223 (52%), Gaps = 1/223 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T N L+ G+ R G ++ + EM G +P +Y+ L+ V + RM+EA+ L
Sbjct: 389 PDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADAL 448
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +++ + + D++ +N +I G C G + RA + +EM V +T+ L+ GYCR
Sbjct: 449 FSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCR 508
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G V+ A + ++M R+G +P+ + LI + + +A + + ++ G PT
Sbjct: 509 EGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRV-RDEMMTTGFDPTIL 567
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+Y LI+GLC+ + E A ++ EMV KG P Y + I+
Sbjct: 568 TYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEA 610
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 100/191 (52%), Gaps = 1/191 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P + T+ +L+ + ++ + ++ ++ + G PD ++ L+ C + A
Sbjct: 422 IQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAF 481
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L +EM + V D + YNT++ G+C G++ A + EM G++ +++ L++GY
Sbjct: 482 QLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGY 541
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ GD+ A V ++M GF+P T LI LC + A ++LK V K G+ P
Sbjct: 542 SKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSK-GITPD 600
Query: 423 EKSYMFLIKGL 433
+ +Y+ +I+ +
Sbjct: 601 DSTYLSIIEAM 611
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 20/275 (7%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
SL +Y IH L +G A ++I+ +R P +L+ Y CG A F L
Sbjct: 355 SLVTYNLFIHALFMEGRMGDADNMIK-EMREKGMMPDAVTHNILINGYCRCGDAKRAFGL 413
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
L + + K I+ T V ++ G ++ +AL ++ + +G++ ++ +
Sbjct: 414 LDE--MVGKGIQP--TLVTYTSLIYVLGKRNRMKEADALFSKIQQ-EGLLPDIIVFNAL- 467
Query: 224 GLDSDATAGIGKDVKRV---------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
+D G ++ R ++V P+ T+N LM G+ REG E+ + EM
Sbjct: 468 -IDGHCANG---NIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMK 523
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
R G +PD SY+ L++ + + M++A ++ +EM + ++ YN +I G C+ E
Sbjct: 524 RRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGE 583
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
AEE +EM G+ T+ ++ D++
Sbjct: 584 HAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 208/439 (47%), Gaps = 29/439 (6%)
Query: 55 KSRWNHLLSLCRSG-LTPTQFSQIALGLKNNPHLALRFFSFT--QHKSLCKHSLSSYATI 111
KS +N +L++ R G L + Q L L + LAL+F + Q H +
Sbjct: 61 KSIYN-ILTIDRWGSLNHMDYRQARLRLVHGK-LALKFLKWVVKQPGLETDHIVQLVCIT 118
Query: 112 IHILSRARLIGPARDVIR-VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLE 170
HIL RAR+ PAR +++ ++L S ++ +F L+ TYR C S P V+D+LI+ L
Sbjct: 119 THILVRARMYDPARHILKELSLMSGKSSF---VFGALMTTYRLCNSNPSVYDILIRVYLR 175
Query: 171 VKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDAT 230
I+ ++I R++ G + V TCNA++ V + +S + +E+
Sbjct: 176 EG---MIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM-------- 224
Query: 231 AGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
+KR ++ P+V TFN L+ EG+FEK + +M + G P +Y+ ++
Sbjct: 225 ------LKR--KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+C++ R + A +L + M+ K V+ DV YN +I C +A+ R+M +
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 336
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ VT+ L+NG+ G V A + N+M G P T LI + EAL +
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
K GL P+E SY L+ GLC+ + + A M G Y+ IDG K
Sbjct: 397 YMMEAK-GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 455
Query: 471 EGNVEMATMLRKEMFENQV 489
G ++ A +L EM ++ +
Sbjct: 456 NGFLDEAVVLLNEMSKDGI 474
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 138/302 (45%), Gaps = 17/302 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+ + ++++ + S+G+ V T N LI ++ R + GY + R++
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM------------- 329
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R + PN T+N L+ GF EG + EM G P+ +++ L+ E
Sbjct: 330 ---RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 386
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+EA K++ M K + V+Y ++ G C+ E A F+ M +GV +T+
Sbjct: 387 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 446
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++G C+ G +D A+++ N+M + G +P+ T LI C R A +I+ R+
Sbjct: 447 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV-CRIY 505
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ GL P Y LI C G ++EA+++ M+ +G ++ + K G V
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 565
Query: 476 MA 477
A
Sbjct: 566 EA 567
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 124/241 (51%), Gaps = 1/241 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T++AL+ GF + G F+ +++ + R+G P+ YS L+ C ++EA
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 533
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++E M + D +N ++ C+ G++A AEEF R M G+ ++V+F+ L+NGY
Sbjct: 534 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 593
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+G+ A V+++M + G P T L+ LC + EA LK+ T
Sbjct: 594 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 653
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y L+ +C+ G + +A+ + EMV + P Y++ I G ++G +A + K
Sbjct: 654 VM-YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 712
Query: 483 E 483
E
Sbjct: 713 E 713
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 10/252 (3%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN +F+ L+ G+ G K V+ EM ++G P ++Y L+ C+ +REAE
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K + + D V YNT++ C+ G +A+A F EM + S T+ L++G
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD-----ILKARVVKF 417
CR G AIL K E G+ + + C +F+A + ++
Sbjct: 699 CRKGKTVIAILF-----AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 753
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P + +I G GK+E+ + EM + P+L Y+ + GY K +V +
Sbjct: 754 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 813
Query: 478 TMLRKEMFENQV 489
+L + + N +
Sbjct: 814 FLLYRSIILNGI 825
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 104/236 (44%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
TFN L+ + G + E+ M G P+ S+ L+ + +A +++EM
Sbjct: 550 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 609
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
Y +++ G C+ G + AE+F + + +V + L+ C++G++
Sbjct: 610 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 669
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A+ ++ +M ++ P+ T LI LC K + A+ K + + P + Y
Sbjct: 670 AKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTC 729
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ G+ + G+ + + + +M G P + +A IDGY + G +E L EM
Sbjct: 730 FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 785
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T NA++ G+ R G EK D+ EM P+ +Y++L+ + + + + + L
Sbjct: 757 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 816
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + + D + ++++ G CE + + + GVE TF L++ C
Sbjct: 817 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 876
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+++ A + M G + T + ++ L R E+ +L + K G+ P +
Sbjct: 877 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLH-EMSKQGISPESR 935
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ LI GLC G ++ A V+ EM+ P SA + K G + AT+L + M
Sbjct: 936 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM 995
Query: 485 FE 486
+
Sbjct: 996 LK 997
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 134/330 (40%), Gaps = 21/330 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE-------------- 221
KIE D++ + ++ ++T N L+ S+ K V + + +YR
Sbjct: 774 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 833
Query: 222 --VFGLDSDATAGIGKDVKRVVRVRP---NVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
V G+ IG + + R + +TFN L+ G D+ M L
Sbjct: 834 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 893
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G D + +++V R +E+ + EM + + + Y +I G C +G++ A
Sbjct: 894 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 953
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
EM + +V +V + G D A L+ M + P ++ L+
Sbjct: 954 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 1013
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
C V EAL+ L+ + GL SY LI GLC +G M A ++ EM G GF
Sbjct: 1014 CCKNGNVIEALE-LRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1072
Query: 457 SLEIYSAFIDGYM-KEGNVEMATMLRKEMF 485
+ Y A I G + +E A ++ K++
Sbjct: 1073 NATTYKALIRGLLARETAFSGADIILKDLL 1102
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN + + G ++ G ++ +M LG PD + + ++ + ++ +
Sbjct: 720 VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 779
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EM ++N ++ YN ++ G+ + +++ + +R + L+G+ +T LV G
Sbjct: 780 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 839
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C + ++ + + +G E + T +LI + C + A D++K + G+
Sbjct: 840 CESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV-MTSLGISLD 898
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ + ++ L + +E+ V EM +G P Y I+G + G+++ A ++++
Sbjct: 899 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 958
Query: 483 EMFENQV 489
EM +++
Sbjct: 959 EMIAHKI 965
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 116/247 (46%), Gaps = 27/247 (10%)
Query: 159 FVFDLLI-KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
+ F++LI KCC +I D+V+++ S G+S+ TC+A++ ++R
Sbjct: 865 YTFNMLISKCCAN----GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 920
Query: 218 IYREVF--GLDSDATAGIG--------KDVKRVVRVR----------PNVHTFNALMVGF 257
+ E+ G+ ++ IG D+K V+ PNV +A++
Sbjct: 921 VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRAL 979
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G ++ + M ++ P S++ LM + C+ + EA +L M + ++ D+
Sbjct: 980 AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 1039
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG-YCRAGDVDSAILVYN 376
V+YN +I G C G+MA A E + EM G +++ T++ L+ G R A ++
Sbjct: 1040 VSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1099
Query: 377 DMCRKGF 383
D+ +GF
Sbjct: 1100 DLLARGF 1106
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 208/439 (47%), Gaps = 29/439 (6%)
Query: 55 KSRWNHLLSLCRSG-LTPTQFSQIALGLKNNPHLALRFFSFT--QHKSLCKHSLSSYATI 111
KS +N +L++ R G L + Q L L + LAL+F + Q H +
Sbjct: 21 KSIYN-ILTIDRWGSLNHMDYRQARLRLVHGK-LALKFLKWVVKQPGLETDHIVQLVCIT 78
Query: 112 IHILSRARLIGPARDVIR-VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLE 170
HIL RAR+ PAR +++ ++L S ++ +F L+ TYR C S P V+D+LI+ L
Sbjct: 79 THILVRARMYDPARHILKELSLMSGKSSF---VFGALMTTYRLCNSNPSVYDILIRVYLR 135
Query: 171 VKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDAT 230
I+ ++I R++ G + V TCNA++ V + +S + +E+
Sbjct: 136 EG---MIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM-------- 184
Query: 231 AGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
+KR ++ P+V TFN L+ EG+FEK + +M + G P +Y+ ++
Sbjct: 185 ------LKR--KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+C++ R + A +L + M+ K V+ DV YN +I C +A+ R+M +
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ VT+ L+NG+ G V A + N+M G P T LI + EAL +
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
K GL P+E SY L+ GLC+ + + A M G Y+ IDG K
Sbjct: 357 YMMEAK-GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415
Query: 471 EGNVEMATMLRKEMFENQV 489
G ++ A +L EM ++ +
Sbjct: 416 NGFLDEAVVLLNEMSKDGI 434
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 138/302 (45%), Gaps = 17/302 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+ + ++++ + S+G+ V T N LI ++ R + GY + R++
Sbjct: 243 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM------------- 289
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R + PN T+N L+ GF EG + EM G P+ +++ L+ E
Sbjct: 290 ---RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 346
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+EA K++ M K + V+Y ++ G C+ E A F+ M +GV +T+
Sbjct: 347 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 406
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++G C+ G +D A+++ N+M + G +P+ T LI C R A +I+ R+
Sbjct: 407 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV-CRIY 465
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ GL P Y LI C G ++EA+++ M+ +G ++ + K G V
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 525
Query: 476 MA 477
A
Sbjct: 526 EA 527
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 124/241 (51%), Gaps = 1/241 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T++AL+ GF + G F+ +++ + R+G P+ YS L+ C ++EA
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++E M + D +N ++ C+ G++A AEEF R M G+ ++V+F+ L+NGY
Sbjct: 494 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 553
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+G+ A V+++M + G P T L+ LC + EA LK+ T
Sbjct: 554 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 613
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y L+ +C+ G + +A+ + EMV + P Y++ I G ++G +A + K
Sbjct: 614 VM-YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 672
Query: 483 E 483
E
Sbjct: 673 E 673
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 10/252 (3%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN +F+ L+ G+ G K V+ EM ++G P ++Y L+ C+ +REAE
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K + + D V YNT++ C+ G +A+A F EM + S T+ L++G
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD-----ILKARVVKF 417
CR G AIL K E G+ + + C +F+A + ++
Sbjct: 659 CRKGKTVIAILF-----AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 713
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P + +I G GK+E+ + EM + P+L Y+ + GY K +V +
Sbjct: 714 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773
Query: 478 TMLRKEMFENQV 489
+L + + N +
Sbjct: 774 FLLYRSIILNGI 785
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 104/236 (44%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
TFN L+ + G + E+ M G P+ S+ L+ + +A +++EM
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
Y +++ G C+ G + AE+F + + +V + L+ C++G++
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 629
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A+ ++ +M ++ P+ T LI LC K + A+ K + + P + Y
Sbjct: 630 AKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTC 689
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ G+ + G+ + + + +M G P + +A IDGY + G +E L EM
Sbjct: 690 FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T NA++ G+ R G EK D+ EM P+ +Y++L+ + + + + + L
Sbjct: 717 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + + D + ++++ G CE + + + GVE TF L++ C
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 836
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+++ A + M G + T + ++ L R E+ +L + K G+ P +
Sbjct: 837 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLH-EMSKQGISPESR 895
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ LI GLC G ++ A V+ EM+ P SA + K G + AT+L + M
Sbjct: 896 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM 955
Query: 485 FE 486
+
Sbjct: 956 LK 957
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 134/330 (40%), Gaps = 21/330 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE-------------- 221
KIE D++ + ++ ++T N L+ S+ K V + + +YR
Sbjct: 734 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793
Query: 222 --VFGLDSDATAGIGKDVKRVVRVRP---NVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
V G+ IG + + R + +TFN L+ G D+ M L
Sbjct: 794 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G D + +++V R +E+ + EM + + + Y +I G C +G++ A
Sbjct: 854 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
EM + +V +V + G D A L+ M + P ++ L+
Sbjct: 914 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 973
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
C V EAL+ L+ + GL SY LI GLC +G M A ++ EM G GF
Sbjct: 974 CCKNGNVIEALE-LRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1032
Query: 457 SLEIYSAFIDGYM-KEGNVEMATMLRKEMF 485
+ Y A I G + +E A ++ K++
Sbjct: 1033 NATTYKALIRGLLARETAFSGADIILKDLL 1062
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 115/248 (46%), Gaps = 1/248 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
V PN + + G ++ G ++ +M LG PD + + ++ + ++ +
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L EM ++N ++ YN ++ G+ + +++ + +R + L+G+ +T LV G
Sbjct: 739 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C + ++ + + +G E + T +LI + C + A D++K + G+
Sbjct: 799 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV-MTSLGISL 857
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ + ++ L + +E+ V EM +G P Y I+G + G+++ A +++
Sbjct: 858 DKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVK 917
Query: 482 KEMFENQV 489
+EM +++
Sbjct: 918 EEMIAHKI 925
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 116/247 (46%), Gaps = 27/247 (10%)
Query: 159 FVFDLLI-KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
+ F++LI KCC +I D+V+++ S G+S+ TC+A++ ++R
Sbjct: 825 YTFNMLISKCCAN----GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 880
Query: 218 IYREVF--GLDSDATAGIG--------KDVKRVVRVR----------PNVHTFNALMVGF 257
+ E+ G+ ++ IG D+K V+ PNV +A++
Sbjct: 881 VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRAL 939
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G ++ + M ++ P S++ LM + C+ + EA +L M + ++ D+
Sbjct: 940 AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 999
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG-YCRAGDVDSAILVYN 376
V+YN +I G C G+MA A E + EM G +++ T++ L+ G R A ++
Sbjct: 1000 VSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059
Query: 377 DMCRKGF 383
D+ +GF
Sbjct: 1060 DLLARGF 1066
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 210/455 (46%), Gaps = 30/455 (6%)
Query: 42 IATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLC 101
I T+ LL SK W+ L R P F L + L LRFF ++Q +
Sbjct: 20 IPTISELL----SKQHWSELKPHLRV-TKPATFLDQLLNAGVDSELVLRFFKWSQKEYRL 74
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+ L + ++H L+ ++ R + +++ E +F L+ G+ +
Sbjct: 75 SYGLEPTSKVLHFLANSKRYSKVRSFLDSFVKN-EKHTVSSVFHSLLLDGGRPGATALII 133
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
D+L+ VKN+E + + G + +++CN L+ + + + +Y+E
Sbjct: 134 DMLV--LAYVKNLE-LHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKE 190
Query: 222 VFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
+ +KR R+ N++TFN + G R G K ED +M G P+
Sbjct: 191 M--------------IKR--RIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPN 234
Query: 282 CYSYSVLMAVFCEE---RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+Y+ L+ +C+ +M +AE +EM + + V +NT+I GFC+ +A A++
Sbjct: 235 VVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKK 294
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F EM G++ + VT+ L+NG C G ++ AI +++ M G +P T LI C
Sbjct: 295 AFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFC 354
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
K+ + EA + V K L P ++ +I C+EG MEE + + M+ +G P++
Sbjct: 355 KKKMMKEATKVFD-DVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNV 413
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
Y+ I G ++ +++ A L EM EN+ + D
Sbjct: 414 STYNCLIAGLCRKQDLQAAKELLNEM-ENKGLKGD 447
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 131/244 (53%), Gaps = 1/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN+ T+N+L+ G G E+ D+W +M LG +P+ +Y+ L+ FC+++ M+EA
Sbjct: 304 LKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEAT 363
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+++++ + + +V+ +NT+I +C+ G M M G+ + T+ L+ G
Sbjct: 364 KVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGL 423
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR D+ +A + N+M KG + + T +LI LC + A +L + GL P
Sbjct: 424 CRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLN-EMFNLGLKPN 482
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G C EGK++ AL V+ M + +P++ Y+ I GY K +E A L
Sbjct: 483 HVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLN 542
Query: 483 EMFE 486
EM E
Sbjct: 543 EMLE 546
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 170/376 (45%), Gaps = 36/376 (9%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSA------ 157
+L+++ I+ L RA + A D I +++ P + + LV Y + GSA
Sbjct: 199 NLNTFNIFINGLCRAGKLNKAEDAIE-DMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKA 257
Query: 158 -PFVFDLLIK--CCLEVK---------NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWE 205
F+ ++L C EV E + + +GL + T N+LI
Sbjct: 258 EAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLING 317
Query: 206 VSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEK 265
+ + +++ ++ GL ++PN+ T+NAL+ GF ++ ++
Sbjct: 318 LCNNGKLEEAIDLWDKMVGLG----------------LKPNIVTYNALINGFCKKKMMKE 361
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
V+ ++++ P+ +++ ++ +C+E M E L M D+ + +V YN +I
Sbjct: 362 ATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIA 421
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
G C ++ A+E EM G++ VT+ L++G C+ +A + N+M G +P
Sbjct: 422 GLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKP 481
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
T L+ C + ++ AL++ + R+ K P +Y LIKG C+ K+E A +
Sbjct: 482 NHVTYNTLMDGYCMEGKLKAALNV-RTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGL 540
Query: 446 QAEMVGKGFEPSLEIY 461
EM+ KG P+ Y
Sbjct: 541 LNEMLEKGLNPNRTTY 556
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 136/287 (47%), Gaps = 33/287 (11%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
N K+E +D+ ++ GL + T NALI + K + +++ +V +
Sbjct: 320 NNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE------ 373
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+ PNV TFN ++ + +EG E+ + M G P+ +Y+ L+A
Sbjct: 374 ----------LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGL 423
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C ++ ++ A++L EM +K ++ DVV YN +I G C+ + AE+ EM G++ +
Sbjct: 424 CRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNH 483
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ L++GYC G + +A+ V M ++ +P T VLI C K EA + L
Sbjct: 484 VTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYC-KINKLEAANGLLN 542
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+++ GL P +Y V+ EM+ KGF P +E
Sbjct: 543 EMLEKGLNPNRTTYDI----------------VRLEMLEKGFSPDIE 573
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 186/394 (47%), Gaps = 31/394 (7%)
Query: 103 HSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFD 162
H L +A H+ R G AR ++ ALR P P E + TY+ S P FD
Sbjct: 149 HLLQCFAIAAHLAVREP--GTARAILVRALRFPS--PHRHFVEQFIFTYKAFSSDPASFD 204
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
LL+ C +++R L GLS +CNA++ + + + ++RE+
Sbjct: 205 LLLLCL----------PSAELLRRLRQYGLSPSPESCNAVLSRLPLDEAI----ALFREL 250
Query: 223 ---------FGLDSDATAGIGKDVKR---VVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
L + +AG KD + + P+V T+ ++ G+ G E +
Sbjct: 251 PDKNVCSHNILLKALLSAGRLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLL 310
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
EMA G E + Y+ ++A+ C + ++ +A ++ E+M V D V + T+I GFC
Sbjct: 311 DEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSK 370
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G++A A F EM G+ + VT L+NG CRAG++ A V +M KG + + T
Sbjct: 371 GDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTY 430
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
VLI C + + EA + +V + P +Y L GLC++G + A ++ EM
Sbjct: 431 TVLIDGYCKRGNMVEAFRV-HNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMC 489
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
KG E ++ Y++ I+G K GN+E A + EM
Sbjct: 490 NKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEM 523
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 155/327 (47%), Gaps = 11/327 (3%)
Query: 172 KNIEKIETCVDIVRM-LMSRGLSVKVSTCNAL-IWEVSRGKGVISGYEIYREVFGLDSDA 229
++ +++ + D+V M G V+ NA+ + + KG+ S +Y V L +
Sbjct: 276 QHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNK 335
Query: 230 TAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
G D RV+ V + F ++ GF +G ++ EM + G D
Sbjct: 336 --GQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRV 393
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+++ L+ C ++EA+++ +EM DK ++ DVV Y +I G+C+ G M A EM
Sbjct: 394 THTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEM 453
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
V + VT+ L +G C+ GDV +A + ++MC KG E T LI LC +
Sbjct: 454 VGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNL 513
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
+A+ I+ + G +Y LI LC+ G+ + A + EM+ KG +PS+ Y+
Sbjct: 514 EQAMRIM-TEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNV 572
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQVR 490
++G+ G VE L + M E VR
Sbjct: 573 LMNGFCMSGRVEGGKKLLEWMLEKNVR 599
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 129/283 (45%), Gaps = 17/283 (6%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+++ ++ +GL V V T LI + ++ + ++ E+ G R
Sbjct: 414 VLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGR----------------R 457
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV T+ AL G ++G ++ EM G E + Y+Y+ L+ C+ + +A
Sbjct: 458 VAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAM 517
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ EM DV Y T+I C+ GE RA +EM G++ S T+ L+NG+
Sbjct: 518 RIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGF 577
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +G V+ + M K P T L+ + C + + +I K + + P
Sbjct: 578 CMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQ-EVAPN 636
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
E +Y LIKG C+ M+EAL EM+ KG + YSA I
Sbjct: 637 ENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALI 679
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 1/241 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T AL+ G R G ++ + V EM G + D +Y+VL+ +C+ M EA ++ EM
Sbjct: 394 THTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEM 453
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ V +VV Y + G C+ G++ A E EM G+E + T+ L+NG C+ G++
Sbjct: 454 VGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNL 513
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A+ + +M G + T LI LC A ++L+ + K G+ P+ +Y
Sbjct: 514 EQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDK-GIKPSIATYNV 572
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
L+ G C G++E K+ M+ K P++ Y++ + Y + N++ T + K M +
Sbjct: 573 LMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQE 632
Query: 489 V 489
V
Sbjct: 633 V 633
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 123/269 (45%), Gaps = 17/269 (6%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
+++ + ++GL + V T N+LI + + + I E+ AG
Sbjct: 483 ELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEM------EAAGH-------- 528
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R +V+T+ L+ + G F++ ++ EM G +P +Y+VLM FC R+
Sbjct: 529 --RTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGG 586
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+KL E M +KNV +VV YN+++ +C M E ++ M V + T+ L+ G
Sbjct: 587 KKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKG 646
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C+A ++ A+ + +M KG S+ LI L +K++ F + ++ GL
Sbjct: 647 HCKARNMKEALYFHQEMIEKGLRLTASSYSALI-RLLNKKKKFSEARVFFDKMRNEGLTA 705
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
Y F + E +E + + E+V
Sbjct: 706 EPDVYSFYMDISFNEDNLESTITLCDELV 734
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 208/439 (47%), Gaps = 29/439 (6%)
Query: 55 KSRWNHLLSLCRSG-LTPTQFSQIALGLKNNPHLALRFFSFT--QHKSLCKHSLSSYATI 111
KS +N +L++ R G L + Q L L + LAL+F + Q H +
Sbjct: 21 KSIYN-ILTIDRWGSLNHMDYRQARLRLVHGK-LALKFLKWVVKQPGLETDHIVQLVCIT 78
Query: 112 IHILSRARLIGPARDVIR-VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLE 170
HIL RAR+ PAR +++ ++L S ++ +F L+ TYR C S P V+D+LI+ L
Sbjct: 79 THILVRARMYDPARHILKELSLMSGKSSF---VFGALMTTYRLCNSNPSVYDILIRVYLR 135
Query: 171 VKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDAT 230
I+ ++I R++ G + V TCNA++ V + +S + +E+
Sbjct: 136 EG---MIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM-------- 184
Query: 231 AGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
+KR ++ P+V TFN L+ EG+FEK + +M + G P +Y+ ++
Sbjct: 185 ------LKR--KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+C++ R + A +L + M+ K V+ DV YN +I C +A+ R+M +
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ VT+ L+NG+ G V A + N+M G P T LI + EAL +
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
K GL P+E SY L+ GLC+ + + A M G Y+ IDG K
Sbjct: 357 YMMEAK-GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415
Query: 471 EGNVEMATMLRKEMFENQV 489
G ++ A +L EM ++ +
Sbjct: 416 NGFLDEAVVLLNEMSKDGI 434
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 138/302 (45%), Gaps = 17/302 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+ + ++++ + S+G+ V T N LI ++ R + GY + R++
Sbjct: 243 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM------------- 289
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R + PN T+N L+ GF EG + EM G P+ +++ L+ E
Sbjct: 290 ---RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 346
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+EA K++ M K + V+Y ++ G C+ E A F+ M +GV +T+
Sbjct: 347 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 406
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++G C+ G +D A+++ N+M + G +P+ T LI C R A +I+ R+
Sbjct: 407 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV-CRIY 465
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ GL P Y LI C G ++EA+++ M+ +G ++ + K G V
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 525
Query: 476 MA 477
A
Sbjct: 526 EA 527
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 124/241 (51%), Gaps = 1/241 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T++AL+ GF + G F+ +++ + R+G P+ YS L+ C ++EA
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++E M + D +N ++ C+ G++A AEEF R M G+ ++V+F+ L+NGY
Sbjct: 494 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 553
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+G+ A V+++M + G P T L+ LC + EA LK+ T
Sbjct: 554 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 613
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y L+ +C+ G + +A+ + EMV + P Y++ I G ++G +A + K
Sbjct: 614 VM-YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 672
Query: 483 E 483
E
Sbjct: 673 E 673
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 10/252 (3%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN +F+ L+ G+ G K V+ EM ++G P ++Y L+ C+ +REAE
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K + + D V YNT++ C+ G +A+A F EM + S T+ L++G
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD-----ILKARVVKF 417
CR G AIL K E G+ + + C +F+A + ++
Sbjct: 659 CRKGKTVIAILF-----AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 713
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P + +I G GK+E+ + EM + P+L Y+ + GY K +V +
Sbjct: 714 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773
Query: 478 TMLRKEMFENQV 489
+L + + N +
Sbjct: 774 FLLYRSIILNGI 785
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 104/236 (44%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
TFN L+ + G + E+ M G P+ S+ L+ + +A +++EM
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
Y +++ G C+ G + AE+F + + +V + L+ C++G++
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 629
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A+ ++ +M ++ P+ T LI LC K + A+ K + + P + Y
Sbjct: 630 AKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTC 689
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ G+ + G+ + + + +M G P + +A IDGY + G +E L EM
Sbjct: 690 FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T NA++ G+ R G EK D+ EM P+ +Y++L+ + + + + + L
Sbjct: 717 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + + D + ++++ G CE + + + GVE TF L++ C
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 836
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+++ A + M G + T + ++ L R E+ +L + K G+ P +
Sbjct: 837 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLH-EMSKQGISPESR 895
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ LI GLC G ++ A V+ EM+ P SA + K G + AT+L + M
Sbjct: 896 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM 955
Query: 485 FE 486
+
Sbjct: 956 LK 957
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 134/330 (40%), Gaps = 21/330 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE-------------- 221
KIE D++ + ++ ++T N L+ S+ K V + + +YR
Sbjct: 734 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793
Query: 222 --VFGLDSDATAGIGKDVKRVVRVRP---NVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
V G+ IG + + R + +TFN L+ G D+ M L
Sbjct: 794 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G D + +++V R +E+ + EM + + + Y +I G C +G++ A
Sbjct: 854 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
EM + +V +V + G D A L+ M + P ++ L+
Sbjct: 914 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 973
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
C V EAL+ L+ + GL SY LI GLC +G M A ++ EM G GF
Sbjct: 974 CCKNGNVIEALE-LRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1032
Query: 457 SLEIYSAFIDGYM-KEGNVEMATMLRKEMF 485
+ Y A I G + +E A ++ K++
Sbjct: 1033 NATTYKALIRGLLARETAFSGADIILKDLL 1062
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 115/248 (46%), Gaps = 1/248 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
V PN + + G ++ G ++ +M LG PD + + ++ + ++ +
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L EM ++N ++ YN ++ G+ + +++ + +R + L+G+ +T LV G
Sbjct: 739 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C + ++ + + +G E + T +LI + C + A D++K + G+
Sbjct: 799 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV-MTSLGISL 857
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ + ++ L + +E+ V EM +G P Y I+G + G+++ A +++
Sbjct: 858 DKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVK 917
Query: 482 KEMFENQV 489
+EM +++
Sbjct: 918 EEMIAHKI 925
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 116/247 (46%), Gaps = 27/247 (10%)
Query: 159 FVFDLLI-KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
+ F++LI KCC +I D+V+++ S G+S+ TC+A++ ++R
Sbjct: 825 YTFNMLISKCCAN----GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 880
Query: 218 IYREVF--GLDSDATAGIG--------KDVKRVVRVR----------PNVHTFNALMVGF 257
+ E+ G+ ++ IG D+K V+ PNV +A++
Sbjct: 881 VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRAL 939
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G ++ + M ++ P S++ LM + C+ + EA +L M + ++ D+
Sbjct: 940 AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 999
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG-YCRAGDVDSAILVYN 376
V+YN +I G C G+MA A E + EM G +++ T++ L+ G R A ++
Sbjct: 1000 VSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059
Query: 377 DMCRKGF 383
D+ +GF
Sbjct: 1060 DLLARGF 1066
>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 177/366 (48%), Gaps = 27/366 (7%)
Query: 125 RDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIV 184
+D RV++ P KLFE ++ +YR C S+P VFD L K ++K K+ +D+
Sbjct: 83 KDHDRVSIDLPS-----KLFEAILYSYRICDSSPCVFDSLFKTYAQMK---KLRNAIDVF 134
Query: 185 RMLMSRGLSVKVSTCNALI-WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRV 243
+ G +V +CNA I +S +G I+ YRE+ + R+
Sbjct: 135 CQMKDYGFLPRVESCNAYISASISLQRGDIA-LTFYREM----------------QRYRI 177
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
PNV+T N +M F + G EK +V+ +M +G P SY+ L+A +C + + K
Sbjct: 178 SPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMK 237
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L M V D V +NT+I GFC G++ A + F EM + V +++T+ L+NGY
Sbjct: 238 LKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYS 297
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G+ + ++++M R G + + T LI LC + R +A ++K + + L P
Sbjct: 298 QVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVK-ELDRENLVPNS 356
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++ LI G C E A ++ M+ G P+ + I + K + + A + +E
Sbjct: 357 STFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVRE 416
Query: 484 MFENQV 489
M E +
Sbjct: 417 MSERSI 422
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 1/215 (0%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C+ + L + + +++R A ++ +M+D V + N I + A
Sbjct: 107 CDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIAL 166
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
F+REM + + T ++ +C+ G ++ AI V+ M GF P ++ LI
Sbjct: 167 TFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGY 226
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C+K + + LK + K G+ P + ++ LI G C GK+ EA K+ +EM P+
Sbjct: 227 CNKGLLNSGMK-LKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPN 285
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
Y+ I+GY + GN EM L EM N ++ +
Sbjct: 286 TITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKAD 320
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 167/395 (42%), Gaps = 50/395 (12%)
Query: 46 VSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPH-----LALRFFSFTQHK-S 99
V++ H S W L S+ +GLTP + I L +K + L + F +
Sbjct: 47 VNVAHSHLINSDWAKLNSM-STGLTPYRMKHIMLKIKKDHDRVSIDLPSKLFEAILYSYR 105
Query: 100 LCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPK-------------LKLFEV 146
+C S + ++ ++ + + A DV ++ P+ L+ ++
Sbjct: 106 ICDSSPCVFDSLFKTYAQMKKLRNAIDVF-CQMKDYGFLPRVESCNAYISASISLQRGDI 164
Query: 147 LVKTYRECGS---APFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
+ YRE +P V+ L + C K K+E +++ + + + G S +++ N LI
Sbjct: 165 ALTFYREMQRYRISPNVYTLNMVMCAFCK-WGKLEKAIEVFKKMETMGFSPTITSYNTLI 223
Query: 204 WEVSRGKGVISG---YEIYREVFGLDSDATA------GIGKDVK-----------RVVRV 243
KG+++ +I E G+ D G + K + V
Sbjct: 224 AGYC-NKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDV 282
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
PN T+N L+ G+ + G E + EM R G + D +Y+ L+ C E R ++A
Sbjct: 283 VPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAY 342
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +E+ +N+ + ++ +I G C RA + ++ M SG + TF+ L++ +C
Sbjct: 343 LVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFC 402
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
+ D D A+ V +M + P+ T + ELC
Sbjct: 403 KNEDFDGAVEVVREMSERSIAPDSDT----LSELC 433
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+SS F+ L Y + + +AI V+ M GF P + I +R AL
Sbjct: 108 DSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALT 167
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+ + ++ + P + ++ C+ GK+E+A++V +M GF P++ Y+ I GY
Sbjct: 168 FYR-EMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGY 226
Query: 469 MKEGNVEMATMLRKEMFENQVRQED 493
+G + L+ M +N VR +D
Sbjct: 227 CNKGLLNSGMKLKILMEKNGVRPDD 251
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ ++ T+NAL++G EG +K + E+ R P+ ++S L+ C + A
Sbjct: 317 IKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAF 376
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L++ M + + +I FC+ + A E REM + S T L G
Sbjct: 377 QLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGL 436
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEG 387
+G + A+ + +M K PEG
Sbjct: 437 WLSGKEELALKLCKEMEMKHLMPEG 461
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 214/426 (50%), Gaps = 27/426 (6%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPA---- 124
L + S++ L +++ AL FFS+ ++ + S+ +Y ++HIL+ ++ A
Sbjct: 89 LGTDEISRVLLRCQSDSISALTFFSWVKNDLGLQPSIQNYCFLVHILAWSKEFKEAMKFL 148
Query: 125 RDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIV 184
++I++ N+ +F+ L+ ++C P +FD+L+K + I++ T
Sbjct: 149 TELIKLVKDCSFNE---DVFQTLLFCCQDCNWDPVIFDMLVKAYVREGMIKEGFT---TF 202
Query: 185 RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVR 244
R ++ G V +CN L+ + + + +++Y+E+ A +G +
Sbjct: 203 RKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEM--------ARVG--------IH 246
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +TFN L F ++G +KV D M G EPD +Y+ L++ +C + R+ +A L
Sbjct: 247 PNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYL 306
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +NV D+V+Y ++ G C+ G++ A + F M G+ V+F L+ GYC+
Sbjct: 307 YRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCK 366
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + + + ++M G P+ T +VLI + R+ AL+++ + +FG+ +
Sbjct: 367 EGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLV-VELERFGVPISTD 425
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y +L+ +CEEG+ A + + +G+ P +EIY+ I+ K ++ A +++ EM
Sbjct: 426 IYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEM 485
Query: 485 FENQVR 490
++
Sbjct: 486 GHRNIK 491
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 127/294 (43%), Gaps = 17/294 (5%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++ RGL+ + + N LI + + + E+ G +GI P+
Sbjct: 345 MIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIG------SGIC----------PD 388
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
T L+ G+ +E ++ VE+ R G Y LM CEE R A+ L +
Sbjct: 389 KVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQ 448
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+ + V YN +I C+ +A A EMG ++ S++T++ L+ CR
Sbjct: 449 RISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTS 508
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
A + +M + G P+ L+ C +R + +A +L+ +F +F +E SY
Sbjct: 509 RSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSE-SY 567
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
L+K CE+ +++Q M+ GF P+++ + I G K VE +L
Sbjct: 568 NTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHGLWKAMAVEKDKLL 621
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 124/499 (24%), Positives = 220/499 (44%), Gaps = 72/499 (14%)
Query: 23 LSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLK 82
+ ++S STPP + +++ S+W H + LTP S + L
Sbjct: 35 FNSLASSESTPPITEE---------VISKSVLSSQW-HFIEQVSPNLTPALISNVLYNLC 84
Query: 83 NNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGP--ARDVIRVALRSPENDPK 140
+ P L F H L H L + + + ++ ARL P A +++ + + +
Sbjct: 85 SKPQLV---SDFIHH--LHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNR 139
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
E+ + R + VFDLL++ C E++ ++ C M+ +G+ K+ TCN
Sbjct: 140 ELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCF---YMMKEKGIVPKIETCN 196
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
++ + + + +Y E+F L R+ V+TFN ++ +E
Sbjct: 197 DMLSLFLKLNRMEMAWVLYAEMFRL----------------RISSTVYTFNIMVNVLCKE 240
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G +K + M LG +P+ SY+ ++ + + A ++ + MR K +E D Y
Sbjct: 241 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 300
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
++I G C+ G + A F +M G+ ++VT+ L++GYC GD++ A ++M +
Sbjct: 301 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 360
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
KG P ST +L+ L + R+ EA D++K + K G+ P +Y LI G G +
Sbjct: 361 KGIMPSVSTYNLLVHALFMEGRMGEADDMIK-EMRKKGIIPDAITYNILINGYSRCGNAK 419
Query: 441 EALKVQAEMVGKGFEPS-----------------------------------LEIYSAFI 465
+A + EM+ KG EP+ + +++A +
Sbjct: 420 KAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 479
Query: 466 DGYMKEGNVEMATMLRKEM 484
DG+ GNVE A ML KEM
Sbjct: 480 DGHCANGNVERAFMLLKEM 498
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 179/386 (46%), Gaps = 30/386 (7%)
Query: 102 KHSLSSYATIIH-ILSRARLIGPAR--DVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
K ++ SY TIIH SR + G R D +RV P++ L + K R A
Sbjct: 259 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR-LEEAS 317
Query: 159 FVFDLLIKCCLEVKNIEKIETCVD--IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGY 216
+FD +++ L V N T +D + + R S + KG++
Sbjct: 318 GLFDKMVEIGL-VPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK---------KGIMPSV 367
Query: 217 EIYRE-VFGLDSDATAGIGKDVKRVVRVR---PNVHTFNALMVGFYREGAFEKVEDVWVE 272
Y V L + G D+ + +R + P+ T+N L+ G+ R G +K D+ E
Sbjct: 368 STYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNE 427
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M G EP +Y+ L+ V RM+EA+ L+E++ D+ V DV+ +N ++ G C G
Sbjct: 428 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGN 487
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ RA +EM V VTF L+ G CR G V+ A ++ ++M R+G +P+ +
Sbjct: 488 VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNT 547
Query: 393 LI---GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
LI G D + F D ++ G PT +Y LIK LC+ + + A ++ EM
Sbjct: 548 LISGYGRRGDIKDAFRVRD----EMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 603
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVE 475
V KG P Y + I+G GNV+
Sbjct: 604 VNKGISPDDSTYLSLIEGM---GNVD 626
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 130/287 (45%), Gaps = 42/287 (14%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N L+ G+ +G E+ EM + G P +Y++L+ E RM EA+ +
Sbjct: 330 PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM 389
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT---------- 354
+EMR K + D + YN +I G+ G +A + EM G+E + VT
Sbjct: 390 IKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 449
Query: 355 -------------------------FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
F +V+G+C G+V+ A ++ +M RK P+ T
Sbjct: 450 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVT 509
Query: 390 IEVLIGELCDKRRVFEA---LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
L+ C + +V EA LD +K R G+ P SY LI G G +++A +V+
Sbjct: 510 FNTLMQGRCREGKVEEARMLLDEMKRR----GIKPDHISYNTLISGYGRRGDIKDAFRVR 565
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
EM+ GF P+L Y+A I K ++A L KEM + +D
Sbjct: 566 DEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDD 612
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 218/499 (43%), Gaps = 72/499 (14%)
Query: 23 LSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLK 82
+ ++S STPP + +++ S+W H + LTP S + L
Sbjct: 57 FNSLASSESTPPITEE---------VISKSVLSSQW-HFIEQVSPNLTPALISNVLYNLC 106
Query: 83 NNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGP--ARDVIRVALRSPENDPK 140
+ P L F H L H L + + + ++ ARL P A +++ + + +
Sbjct: 107 SKPQLV---SDFIHH--LHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNR 161
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
E+ + R + VFDLL++ C E++ ++ C M+ +G+ K+ TCN
Sbjct: 162 ELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCF---YMMKEKGIVPKIETCN 218
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
++ + + + +Y E+F L R+ V+TFN ++ +E
Sbjct: 219 DMLSLFLKLNRMEMAWVLYAEMFRL----------------RISSTVYTFNIMVNVLCKE 262
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G +K + M LG +P+ SY+ ++ + + A ++ + MR K +E D Y
Sbjct: 263 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 322
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
++I G C+ G + A F +M G+ ++VT+ L++GYC GD++ A ++M +
Sbjct: 323 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 382
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
KG P ST +L+ L + R+ EA D++K + K G+ P +Y LI G G +
Sbjct: 383 KGIMPSVSTYNLLVHALFMEGRMGEADDMIK-EMRKKGIIPDAITYNILINGYSRCGNAK 441
Query: 441 EALKVQAEMVGKGFEPSLEIYS-----------------------------------AFI 465
+A + EM+ KG EP+ Y+ A +
Sbjct: 442 KAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 501
Query: 466 DGYMKEGNVEMATMLRKEM 484
DG+ GNVE A ML KEM
Sbjct: 502 DGHCANGNVERAFMLLKEM 520
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 179/386 (46%), Gaps = 30/386 (7%)
Query: 102 KHSLSSYATIIH-ILSRARLIGPAR--DVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
K ++ SY TIIH SR + G R D +RV P++ L + K R A
Sbjct: 281 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR-LEEAS 339
Query: 159 FVFDLLIKCCLEVKNIEKIETCVD--IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGY 216
+FD +++ L V N T +D + + R S + KG++
Sbjct: 340 GLFDKMVEIGL-VPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK---------KGIMPSV 389
Query: 217 EIYRE-VFGLDSDATAGIGKDVKRVVRVR---PNVHTFNALMVGFYREGAFEKVEDVWVE 272
Y V L + G D+ + +R + P+ T+N L+ G+ R G +K D+ E
Sbjct: 390 STYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNE 449
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M G EP +Y+ L+ V RM+EA+ L+E++ D+ V DV+ +N ++ G C G
Sbjct: 450 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGN 509
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ RA +EM V VTF L+ G CR G V+ A ++ ++M R+G +P+ +
Sbjct: 510 VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNT 569
Query: 393 LI---GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
LI G D + F D ++ G PT +Y LIK LC+ + + A ++ EM
Sbjct: 570 LISGYGRRGDIKDAFRVRD----EMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 625
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVE 475
V KG P Y + I+G GNV+
Sbjct: 626 VNKGISPDDSTYLSLIEGM---GNVD 648
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 130/287 (45%), Gaps = 42/287 (14%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N L+ G+ +G E+ EM + G P +Y++L+ E RM EA+ +
Sbjct: 352 PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM 411
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT---------- 354
+EMR K + D + YN +I G+ G +A + EM G+E + VT
Sbjct: 412 IKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 471
Query: 355 -------------------------FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
F +V+G+C G+V+ A ++ +M RK P+ T
Sbjct: 472 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVT 531
Query: 390 IEVLIGELCDKRRVFEA---LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
L+ C + +V EA LD +K R G+ P SY LI G G +++A +V+
Sbjct: 532 FNTLMQGRCREGKVEEARMLLDEMKRR----GIKPDHISYNTLISGYGRRGDIKDAFRVR 587
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
EM+ GF P+L Y+A I K ++A L KEM + +D
Sbjct: 588 DEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDD 634
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 128/499 (25%), Positives = 223/499 (44%), Gaps = 76/499 (15%)
Query: 43 ATVVSLLTHHRSKSRWNHLLSLCR--SGLTPTQFSQIALGLKNN---PHLALRFFSFTQH 97
A V +LL+ R W ++ S L+P S + G +++ P L L FF +++
Sbjct: 51 AEVATLLS--RCAGDWKLAIAASDIPSRLSPDAVSSLIFGGRSHSLHPKLLLDFFYWSRP 108
Query: 98 K--------------SLCKHSLSSYAT-IIHILSRARLIGP------ARDVIRVALRSPE 136
+ SLC SL A ++H + A P R + RS
Sbjct: 109 RIAPPSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRS 168
Query: 137 NDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKV 196
P + +VLV TY++ GS + +V M+ GL+
Sbjct: 169 PSPSTAVLDVLVDTYKKTGS--------------------VRNAAQVVLMMADLGLAPTR 208
Query: 197 STCNALIWEVSRG---------KGVISGYEIYREVF-----------GLDSDATAGIGKD 236
CN L+ ++ R KG + G I +V+ D DA + ++
Sbjct: 209 RCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEE 268
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
++R N T+N ++ G R GA E+ EM G PD ++Y LM C+
Sbjct: 269 MRRR-DCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGS 327
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
R++EA+ L +EM ++ ++V Y T++ GF + G+ A A + +EM +GV+ + + ++
Sbjct: 328 RLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYD 387
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG---ELCDKRRVFEALDILKAR 413
+L+ G C+ G + A + +M + G P+ T L+ + DK FE L+ ++
Sbjct: 388 NLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNS 447
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
G+ P SY +I GLC+ G+ +EA + EM+ +G +P+ +Y+ I G+ KEGN
Sbjct: 448 ----GILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGN 503
Query: 474 VEMATMLRKEMFENQVRQE 492
+ +A ++M + V +
Sbjct: 504 ISLACEALEKMTKANVHPD 522
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 121/247 (48%), Gaps = 2/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN T+ L+ G+++ +EKV + M G +PD + Y +++ M A
Sbjct: 589 LKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 648
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ E+ + D+ Y+++I G C+I +M +A EM G+E V + L++G+
Sbjct: 649 MVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGF 708
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR+GD+ A V++ + KG P T LI C + +A D+ K ++ G+ P
Sbjct: 709 CRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYK-EMLDRGIAPD 767
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y L G + +E+AL + EM +G+ ++ +++ + G+ K G ++ L
Sbjct: 768 AFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLH 826
Query: 483 EMFENQV 489
M + ++
Sbjct: 827 VMMDREI 833
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 120/243 (49%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+PN ++ L+ G + G + + EM ++G PD ++Y+ LM ++ A
Sbjct: 379 VQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAF 438
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EMR+ + +V +Y +I G C+ GE A EM G++ ++ + L+ G+
Sbjct: 439 ELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH 498
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G++ A M + P+ LI L R+ EA + A+V K GL P
Sbjct: 499 SKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYY-AQVQKRGLVPD 557
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E +Y LI G C+ G +E+A ++ +M+ G +P+ + Y+ ++GY K + E + + +
Sbjct: 558 EFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQ 617
Query: 483 EMF 485
M
Sbjct: 618 SML 620
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 127/310 (40%), Gaps = 77/310 (24%)
Query: 241 VRVRPNVHTFNALMVGFY----REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
V +RP+ T+N LM G + ++GAFE + EM G P+ YSY +++ C+
Sbjct: 412 VGLRPDTFTYNPLMQGHFQQHDKDGAFELLN----EMRNSGILPNVYSYGIMINGLCQNG 467
Query: 297 RMREAEKLWEEM-----------------------------------RDKNVEHDVVAYN 321
+EA L EEM NV D+ YN
Sbjct: 468 ESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYN 527
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
++I G +G M AEE++ ++ G+ T+ L++GYC+ G+++ A + M
Sbjct: 528 SLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNS 587
Query: 382 GFEPEGSTIEVLI----------------------GELCD------------KRRVFEAL 407
G +P T L+ G+ D + E
Sbjct: 588 GLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVA 647
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++ V K GL P Y LI GLC+ ME+A+ + EM +G EP + Y+A IDG
Sbjct: 648 FMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDG 707
Query: 468 YMKEGNVEMA 477
+ + G++ A
Sbjct: 708 FCRSGDISRA 717
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 146/337 (43%), Gaps = 29/337 (8%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
F + LI + N+EK + ++R +++ GL T L+ G + YE
Sbjct: 559 FTYSGLIHGYCKTGNLEKADQ---LLRQMLNSGLKPNADTYTDLL----EGYFKSNDYEK 611
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+ + G G +P+ H + ++ R E V E+ + G
Sbjct: 612 VSSIL----QSMLGSGD--------KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGL 659
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
PD + YS L++ C+ M +A L +EM + +E +V YN +I GFC G+++RA
Sbjct: 660 VPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARN 719
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F + G+ + VT+ L++G C+ GD+ A +Y +M +G P+ VL
Sbjct: 720 VFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCS 779
Query: 399 DKRRVFEAL----DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
D + +AL ++ LF T L+ G C+ GK++E K+ M+ +
Sbjct: 780 DAADLEQALFLTEEMFNRGYANVSLFNT------LVHGFCKRGKLQETEKLLHVMMDREI 833
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
P+ + + + K G + A + E+ + + Q
Sbjct: 834 VPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQ 870
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 123/280 (43%), Gaps = 36/280 (12%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V P++ +N+L+ G G E+ E+ + ++ + G PD ++YS L+ +C+ + +
Sbjct: 517 ANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEK 576
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM----------------- 343
A++L +M + ++ + Y ++ G+ + + + + M
Sbjct: 577 ADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIR 636
Query: 344 GLSGVESSSVTF------------------EHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
LS E+ V F L++G C+ D++ A+ + ++M ++G EP
Sbjct: 637 NLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEP 696
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
LI C + A ++ + + K GL P +Y LI G C+ G + +A +
Sbjct: 697 GIVCYNALIDGFCRSGDISRARNVFDSILAK-GLVPNCVTYTALIDGNCKNGDITDAFDL 755
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
EM+ +G P +Y+ G ++E A L +EMF
Sbjct: 756 YKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMF 795
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 223/481 (46%), Gaps = 33/481 (6%)
Query: 21 QLLSQFSTSSST-------PPSDQSHNLIATVVSLLTHHRSKSRWNHL-LSLCRSGLTPT 72
Q L+Q T+S + P + +N++ + S L H S H ++ L
Sbjct: 42 QTLNQSQTNSISNSLYHLLPQTQNPNNIVNLICSNLKQHNSNLALLHTEVNALLPHLGAQ 101
Query: 73 QFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVAL 132
+ S++ L +++ AL FF++ ++ + S +Y ++H L+ +R A + +
Sbjct: 102 EISRVLLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELV 161
Query: 133 RSPEND-PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRG 191
++D P +F+ L+ +C P VFD+L+K L + ++ + R ++ G
Sbjct: 162 ELVKDDLPSEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMG---RVREGLRSFRRMLRVG 218
Query: 192 LSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATAGIGKDVKRVVRVRPNVHT 249
V T N L+ + + +E+Y E+ FG + PN++T
Sbjct: 219 FVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFG------------------IAPNLYT 260
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
FN L ++G KV +M G +PD +Y+ L+ +C + R+ +A L++ M
Sbjct: 261 FNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMY 320
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ V D+V+Y ++ G C+ G + A + F M G+ VT+ L++GYC+ G +
Sbjct: 321 RRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQ 380
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+ + +DM G P+ T VL+ + + AL+++ + +FG+ ++ Y +L
Sbjct: 381 ESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLV-VELQRFGVSISQDIYSYL 439
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I LC E + A + M G +P LEIY+ I + + + A +L+ EM + ++
Sbjct: 440 IVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEI 499
Query: 490 R 490
+
Sbjct: 500 K 500
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 1/215 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T L+ G+ +EG F ++ VE+ R G YS L+ C E R A+
Sbjct: 394 ISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAK 453
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L E M + ++ YN +I FC+ +A A EM ++ + T+ ++
Sbjct: 454 NLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCL 513
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
R + +M G P+ L C + + +A +L +F + T
Sbjct: 514 SRLSRSMEGESLVGEMVASGMLPDLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHDT 573
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
E S+ LI+ +G + +L++Q M+ G P+
Sbjct: 574 E-SFNALIRITSAKGDIARSLEIQDMMLKMGLLPN 607
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 222/476 (46%), Gaps = 70/476 (14%)
Query: 71 PTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI-R 129
P ++ ++N P +ALRFF + + ++ K S SY+ I+ IL+R L+ A V+ +
Sbjct: 47 PKLLVRVLNTVRNRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEK 106
Query: 130 VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMS 189
V EN + +V+ + S + DLL+ ++ +EK C+ + ++S
Sbjct: 107 VVSVKMENG----VIDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEK---CLLVFYKMVS 159
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG-----------------LDSDATAG 232
+GL V CN ++ + R + + ++ REV+ LDS G
Sbjct: 160 KGLLPDVKNCNRVL-RLLRDRD--NNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKG 216
Query: 233 IGKDVKRVV------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
+ ++ +++ PN T+N L+ G G E+ +++ +M RLG E Y+Y
Sbjct: 217 MVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYD 276
Query: 287 VLMAVFCEERRMREAEKLWEEMR-----------------------------------DK 311
L+ +CE+ ++ EA +L EEM +K
Sbjct: 277 PLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNK 336
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
N+ D+V+YNT+I G+ +G + A F E+ + S VT+ L++G CR GD+D A
Sbjct: 337 NLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVA 396
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
+ + ++M + G +P+ T + C + A ++ ++ GL P +Y+ I
Sbjct: 397 MRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFD-EMLNRGLQPDRFAYITRIV 455
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
G + G +A +Q EM+ +GF P L Y+ FIDG K GN++ A+ L K+M N
Sbjct: 456 GELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYN 511
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 13/254 (5%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TF + GF + G ++++ EM G +PD ++Y + + +A +
Sbjct: 410 PDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGM 469
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EEM + D++ YN I G ++G + A E ++M +G+ VT+ +++ +
Sbjct: 470 QEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLM 529
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF------G 418
AG + A ++ +M KG P T VLI + R LK ++ F G
Sbjct: 530 AGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGR-------LKLAILHFFEMHEKG 582
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ P +Y LI GLC+ KM++A AEM KG P+ Y+ I+ G+ + A
Sbjct: 583 VHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEAL 642
Query: 479 MLRKEMFENQVRQE 492
L K+M + +++ +
Sbjct: 643 RLYKDMLDREIQPD 656
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 1/215 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ + +VG + G K + EM G PD +Y+V + + ++EA
Sbjct: 443 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEAS 502
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L ++M + D V Y +II G + +A F EM G+ S VT+ L++ Y
Sbjct: 503 ELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSY 562
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G + AIL + +M KG P T LI LC R++ +A + K G+ P
Sbjct: 563 AVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAK-GISPN 621
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+ +Y LI C G +EAL++ +M+ + +P
Sbjct: 622 KYTYTILINENCNLGHWQEALRLYKDMLDREIQPD 656
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 142/333 (42%), Gaps = 49/333 (14%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN------DPKL 141
A F+ +++SL S+ +Y T+I L R +G + VA+R + DP +
Sbjct: 361 AFLLFAELRYRSLAP-SVVTYNTLIDGLCR---LGD----LDVAMRLKDEMIKHGPDPDV 412
Query: 142 KLFEVLVKTYRECGSAPF---VFDLLIKCCLEVKNIEKIETCVDIVRM------------ 186
F V+ + + G+ P +FD ++ L+ I V +++
Sbjct: 413 FTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEE 472
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRVR 244
+++RG + T N I + + + E+ +++ GL D
Sbjct: 473 MLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHV-------------- 518
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
T+ +++ G K +++EM G P +Y+VL+ + R++ A
Sbjct: 519 ----TYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILH 574
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM +K V +V+ YN +I G C++ +M +A FF EM G+ + T+ L+N C
Sbjct: 575 FFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCN 634
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
G A+ +Y DM + +P+ T L+ L
Sbjct: 635 LGHWQEALRLYKDMLDREIQPDSCTHRSLLKHL 667
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 212/469 (45%), Gaps = 64/469 (13%)
Query: 59 NHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFS-FTQHKSLCKHSLSSYATIIHILSR 117
NHL+ L P ++ +N+ L RF H KH+ S + +IHIL R
Sbjct: 71 NHLIRL-----NPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVR 125
Query: 118 ARLIGPARD-VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEK 176
+ + A+ ++R+ RS + +L++ L T+ CGS VFDLLI+ ++ + + +
Sbjct: 126 SGRLSDAQSCLLRMIRRSGVS--RLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLRE 183
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
++R S+G +V + CNALI + R V + +Y+E+ + +G+G
Sbjct: 184 AHEAFTLLR---SKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI------SRSGVG-- 232
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
NV+T N ++ ++G EKV ++ G PD +Y+ L++ + +
Sbjct: 233 --------INVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
M EA +L M K V YNT+I G C+ G+ RA+E F EM SG+ S T+
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 357 HLVNGYCRAGDV-----------------------------------DSAILVYNDMCRK 381
L+ C+ GDV D A++ +N +
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G P+ +LI C K + A++ L+ +++ G +Y ++ GLC+ + E
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMN-LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
A K+ EM + P + IDG+ K GN++ A L ++M E ++R
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 122/244 (50%), Gaps = 1/244 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + L+ G+ R+G ++ EM + GC D +Y+ ++ C+ + + EA+KL
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM ++ + D +I G C++G + A E F++M + VT+ L++G+ +
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GD+D+A ++ DM K P + +L+ LC K + EA + + K + PT
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK-NIKPTVM 586
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+IKG C G + +M+ +GF P Y+ I G+++E N+ A L K+M
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Query: 485 FENQ 488
E Q
Sbjct: 647 EEEQ 650
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 34/252 (13%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+R +V T+N L+ GF + G + +++W +M P SYS+L+ C + + EA
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++W+EM KN++ V+ N++I G+C G + E F +M G +++ L+ G
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ R ++ A + +K E +G GL P
Sbjct: 630 FVREENMSKAF----GLVKKMEEEQG------------------------------GLVP 655
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y ++ G C + +M+EA V +M+ +G P Y+ I+G++ + N+ A +
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIH 715
Query: 482 KEMFENQVRQED 493
EM + +D
Sbjct: 716 DEMLQRGFSPDD 727
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 196/402 (48%), Gaps = 30/402 (7%)
Query: 103 HSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFD 162
H L S+A H L+ R G AR ++ ALR P P E + TY+ S P FD
Sbjct: 146 HLLQSFAVAAH-LAAVRDPGAARAILVRALRFPS--PHRHFVEQFISTYKAFSSDPVSFD 202
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
LL+ C ++ L G+S +CNA++ + + V ++++E+
Sbjct: 203 LLLLCL----------PSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAV----QLFQEL 248
Query: 223 ---------FGLDSDATAGIGKDVKRV---VRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
L + TAG KD ++ + P+V T+ ++ G+ E +
Sbjct: 249 PEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLL 308
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
EMA G E + +Y+ ++A+ C+E ++ +A ++ E+M V D + T++ GFC
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G++A A +F EM G+ + VT+ L+NG CRAG++ A V +M KG + + T
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
VLI C ++ EA ++ ++V+ + P +Y L GLC++G + A ++ EM
Sbjct: 429 TVLIDGYCKVGKMTEAF-LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
KG E ++ Y++ I+G K GN+E A +M E ++ +
Sbjct: 488 SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+ AL+ G R G ++ E V EM G + D +Y+VL+ +C+ +M EA + +M
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
K V +VV Y + G C+ G++ A E EM G+E + T+ L+NG C+AG++
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A+ DM G +P+ T +IG LC + + A +L+ + K G+ PT +Y
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK-GIKPTIVTYNV 570
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
L+ G C G++E ++ M+ K P+ Y++ + Y E N++ T + K M +
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 489 V 489
V
Sbjct: 631 V 631
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 124/240 (51%), Gaps = 1/240 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F +M GF R+G + + EM + G D +Y+ L+ C ++EAE++ +EM
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
DK ++ D V Y +I G+C++G+M A +M V + VT+ L +G C+ GDV
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+A + ++MC KG E T LI LC + +A+ + + + GL P +Y +
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTM-IDMDEAGLKPDVYTYTTI 536
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I LC+ +++ A + EM+ KG +P++ Y+ ++G+ G VE L + M E +
Sbjct: 537 IGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 153/325 (47%), Gaps = 20/325 (6%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATA---------GIGK 235
+ RGL+ T ALI + R + + +E+ GLD DA +GK
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440
Query: 236 DVKRVV--------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
+ + RV PNV T+ AL G ++G ++ EM G E + ++Y+
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ C+ + +A + +M + ++ DV Y TIIG C+ E+ RA +EM G
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
++ + VT+ L+NG+C +G V+ + M K P +T L+ + C ++ +
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTT 620
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+I K + + + P E +Y LIKG C+ M+EAL +EM+ KGF + Y+A I
Sbjct: 621 EIYKGMLSQ-EVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRL 679
Query: 468 YMKEGNVEMATMLRKEMFENQVRQE 492
K+ A L ++M + ++ E
Sbjct: 680 LNKKKKFTEARRLFEKMRKERLTAE 704
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ T+N+L+ G + G E+ ++M G +PD Y+Y+ ++ C+ + + A L
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM DK ++ +V YN ++ GFC G + + M + ++ T+ L+ YC
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
++ S +Y M + P +T +LI C R + EAL + +++ G T S
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEAL-YFHSEMIEKGFRLTASS 672
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI+ L ++ K EA ++ +M + ++Y+ +ID E N+E L E+
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732
Query: 486 E 486
E
Sbjct: 733 E 733
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 66/149 (44%), Gaps = 16/149 (10%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++E ++ ++ + + +T N+L+ + K + S EIY+ + +
Sbjct: 580 RVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE--------- 630
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
V PN +T+N L+ G + ++ EM G SY+ L+ + ++
Sbjct: 631 -------VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKK 683
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTII 324
++ EA +L+E+MR + + + YN I
Sbjct: 684 KKFTEARRLFEKMRKERLTAEPDVYNFYI 712
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 196/402 (48%), Gaps = 30/402 (7%)
Query: 103 HSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFD 162
H L S+A H L+ R G AR ++ ALR P P E + TY+ S P FD
Sbjct: 146 HLLQSFAVAAH-LAAVRDPGAARAILVRALRFPS--PHRHFVEQFISTYKAFSSDPVSFD 202
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
LL+ C ++ L G+S +CNA++ + + V ++++E+
Sbjct: 203 LLLLCL----------PSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAV----QLFQEL 248
Query: 223 ---------FGLDSDATAGIGKDVKRV---VRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
L + TAG KD ++ + P+V T+ ++ G+ E +
Sbjct: 249 PEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLL 308
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
EMA G E + +Y+ ++A+ C+E ++ +A ++ E+M V D + T++ GFC
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G++A A +F EM G+ + VT+ L+NG CRAG++ A V +M KG + + T
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
VLI C ++ EA ++ ++V+ + P +Y L GLC++G + A ++ EM
Sbjct: 429 TVLIDGYCKVGKMTEAF-LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
KG E ++ Y++ I+G K GN+E A +M E ++ +
Sbjct: 488 SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+ AL+ G R G ++ E V EM G + D +Y+VL+ +C+ +M EA + +M
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
K V +VV Y + G C+ G++ A E EM G+E + T+ L+NG C+AG++
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A+ DM G +P+ T +IG LC + + A +L+ + K G+ PT +Y
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK-GIKPTIVTYNV 570
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
L+ G C G++E ++ M+ K P+ Y++ + Y E N++ T + K M +
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 489 V 489
V
Sbjct: 631 V 631
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 124/240 (51%), Gaps = 1/240 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F +M GF R+G + + EM + G D +Y+ L+ C ++EAE++ +EM
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
DK ++ D V Y +I G+C++G+M A +M V + VT+ L +G C+ GDV
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+A + ++MC KG E T LI LC + +A+ + + + GL P +Y +
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTM-IDMDEAGLKPDVYTYTTI 536
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I LC+ +++ A + EM+ KG +P++ Y+ ++G+ G VE L + M E +
Sbjct: 537 IGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 154/325 (47%), Gaps = 20/325 (6%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATA---------GIGK 235
+ RGL+ T ALI + R + + +E+ GLD DA +GK
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440
Query: 236 DVKRVV--------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
+ + RV PNV T+ AL G ++G ++ EM G E + ++Y+
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ C+ + +A + +M + ++ DV Y TIIG C+ E+ RA +EM G
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
++ + VT+ L+NG+C +G V+ + M K P +T L+ + C ++ +
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTT 620
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+I K + + + P E +Y LIKG C+ M+EAL +EM+ KGF + Y+A I
Sbjct: 621 EIYKGMLSQ-EVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRL 679
Query: 468 YMKEGNVEMATMLRKEMFENQVRQE 492
K+ A L ++M ++++ E
Sbjct: 680 LNKKKKFTEARRLFEKMRKDRLTAE 704
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 116/241 (48%), Gaps = 1/241 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ T+N+L+ G + G E+ ++M G +PD Y+Y+ ++ C+ + + A L
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM DK ++ +V YN ++ GFC G + + M + ++ T+ L+ YC
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
++ S +Y M + P +T +LI C R + EAL + +++ G T S
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEAL-YFHSEMIEKGFRLTASS 672
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI+ L ++ K EA ++ +M ++Y+ +ID E N+E L E+
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732
Query: 486 E 486
E
Sbjct: 733 E 733
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 16/149 (10%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++E ++ ++ + + +T N+L+ + K + S EIY+ + +
Sbjct: 580 RVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE--------- 630
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
V PN +T+N L+ G + ++ EM G SY+ L+ + ++
Sbjct: 631 -------VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKK 683
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTII 324
++ EA +L+E+MR + + YN I
Sbjct: 684 KKFTEARRLFEKMRKDRLTAEPDVYNFYI 712
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 193/402 (48%), Gaps = 23/402 (5%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+H+L +Y T+IH L +++ A+ +I++ + D +F +++T S +VF
Sbjct: 10 RHTLHTYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVF 69
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
LI LE + C + R L V TC ++ + + K + Y+E
Sbjct: 70 SGLINAYLESGFVRDAIECFRLTR---EHKLRVPFDTCRKVLEHLMKLKYFKLVWGFYKE 126
Query: 222 VFGLDSDAT----------------AGIGKDVKRVVR---VRPNVHTFNALMVGFYREGA 262
+ A+ I + V + +RP+V +FN LM G+ R G
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGD 186
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
++ + M G +PD Y+YSVL+ C+E +M EA L+ EM DK + + V + T
Sbjct: 187 LDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTT 246
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G C+ G++ A E +++M +T+ L+ G C+ GD+ A + ++M KG
Sbjct: 247 LIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKG 306
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+P+ T LI C + + A + L+ +VK + + +Y LI GLC+EG+ +A
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLDSAFE-LRETMVKESIRLDDVAYTALISGLCQEGRATDA 365
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
K+ EM+ G +P Y+ I+ + K+ +V+ A L KEM
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEM 407
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 197/409 (48%), Gaps = 25/409 (6%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
KH++ SY + HIL AR+ A ++R + S +F+VL T C VF
Sbjct: 7 KHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVCVPGFGVF 66
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
D L +E E+ C +M R + K +CN L+ + +R +++
Sbjct: 67 DALFSVLIEEDMFEEALQCFS--KMKRCR-VFPKTRSCNGLLHKFARLGKTDGMKRFFKD 123
Query: 222 VFGL--------------------DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
+ G D +A +G+ +++K + P+ T+N+++ G+ + G
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMK-FRGLIPDTVTYNSMIDGYGKVG 182
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ + EM + CEPD +Y+ L+ FC+ ++ + + + EM+ ++ +VV+Y+
Sbjct: 183 RLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYS 242
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
T++ FC+ M +A +F+ +M G+ + T+ LV+ YC+ G++ A + ++M +
Sbjct: 243 TLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQV 302
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G E T LI LCD R+ EA ++ ++V G+ P SY LI G + M+
Sbjct: 303 GVEWNVVTYTALIDGLCDVERIKEAEELF-GKMVTAGVIPNLASYTALIHGFVKAKNMDR 361
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
AL++ EM G+G +P L +Y FI +E A ++ EM E ++
Sbjct: 362 ALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIK 410
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 139/314 (44%), Gaps = 70/314 (22%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV +++ L+ F +E ++ +V+M RLG P+ ++Y+ L+ +C+ + +A
Sbjct: 234 LKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAF 293
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L +EM VE +VV Y +I G C++ + AEE F +M +GV + ++ L++G+
Sbjct: 294 RLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGF 353
Query: 363 CRAGD-----------------------------------VDSAILVYNDMCRKG----- 382
+A + +++A +V N+M KG
Sbjct: 354 VKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANT 413
Query: 383 ----------FEPEGS--------------------TIEVLIGELCDKRRVFEALDILKA 412
F+ E T VLI LC + V +A+D
Sbjct: 414 FIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGR 473
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
FGL Y +I GLC+E ++E A + +M KG P Y++ IDG +K+G
Sbjct: 474 ISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQG 533
Query: 473 NVEMATMLRKEMFE 486
NV A LR +M E
Sbjct: 534 NVVQALALRDKMAE 547
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
TF L+ G + K D + ++ G + + Y+ ++ C+E ++ A L+E+
Sbjct: 450 TFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQ 509
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
M K + D AY ++I G + G + +A +M GVES +
Sbjct: 510 MAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGA 554
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 196/402 (48%), Gaps = 30/402 (7%)
Query: 103 HSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFD 162
H L S+A H L+ R G AR ++ ALR P P E + TY+ S P FD
Sbjct: 146 HLLQSFAVAAH-LAAVRDPGAARAILVRALRFPS--PHRHFVEQFISTYKAFSSDPVSFD 202
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
LL+ C ++ L G+S +CNA++ + + V ++++E+
Sbjct: 203 LLLLCL----------PSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAV----QLFQEL 248
Query: 223 ---------FGLDSDATAGIGKDVKRV---VRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
L + TAG KD ++ + P+V T+ ++ G+ E +
Sbjct: 249 PEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLL 308
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
EMA G E + +Y+ ++A+ C+E ++ +A ++ E+M V D + T++ GFC
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G++A A +F EM G+ + VT+ L+NG CRAG++ A V +M KG + + T
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
VLI C ++ EA ++ ++V+ + P +Y L GLC++G + A ++ EM
Sbjct: 429 TVLIDGYCKVGKMTEAF-LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
KG E ++ Y++ I+G K GN+E A +M E ++ +
Sbjct: 488 SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+ AL+ G R G ++ E V EM G + D +Y+VL+ +C+ +M EA + +M
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
K V +VV Y + G C+ G++ A E EM G+E + T+ L+NG C+AG++
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A+ DM G +P+ T +IG LC + + A +L+ + K G+ PT +Y
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK-GIKPTIVTYNV 570
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
L+ G C G++E ++ M+ K P+ Y++ + Y E N++ T + K M +
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 489 V 489
V
Sbjct: 631 V 631
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 124/240 (51%), Gaps = 1/240 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F +M GF R+G + + EM + G D +Y+ L+ C ++EAE++ +EM
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
DK ++ D V Y +I G+C++G+M A +M V + VT+ L +G C+ GDV
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+A + ++MC KG E T LI LC + +A+ + + + GL P +Y +
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTM-IDMDEAGLKPDVYTYTTI 536
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I LC+ +++ A + EM+ KG +P++ Y+ ++G+ G VE L + M E +
Sbjct: 537 IGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 153/325 (47%), Gaps = 20/325 (6%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATA---------GIGK 235
+ RGL+ T ALI + R + + +E+ GLD DA +GK
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440
Query: 236 DVKRVV--------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
+ + RV PNV T+ AL G ++G ++ EM G E + ++Y+
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ C+ + +A + +M + ++ DV Y TIIG C+ E+ RA +EM G
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
++ + VT+ L+NG+C +G V+ + M K P +T L+ + C ++ +
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTT 620
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+I K + + + P E +Y LIKG C+ M+EAL +EM+ KGF + Y+A I
Sbjct: 621 EIYKGMLSQ-EVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRL 679
Query: 468 YMKEGNVEMATMLRKEMFENQVRQE 492
K+ A L ++M + ++ E
Sbjct: 680 LNKKKKFTEARRLFEKMRKERLTAE 704
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ T+N+L+ G + G E+ ++M G +PD Y+Y+ ++ C+ + + A L
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM DK ++ +V YN ++ GFC G + + M + ++ T+ L+ YC
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
++ S +Y M + P +T +LI C R + EAL + +++ G T S
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEAL-YFHSEMIEKGFRLTASS 672
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI+ L ++ K EA ++ +M + ++Y+ +ID E N+E L E+
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732
Query: 486 E 486
E
Sbjct: 733 E 733
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 66/149 (44%), Gaps = 16/149 (10%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++E ++ ++ + + +T N+L+ + K + S EIY+ + +
Sbjct: 580 RVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE--------- 630
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
V PN +T+N L+ G + ++ EM G SY+ L+ + ++
Sbjct: 631 -------VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKK 683
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTII 324
++ EA +L+E+MR + + + YN I
Sbjct: 684 KKFTEARRLFEKMRKERLTAEPDVYNFYI 712
>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Glycine max]
Length = 626
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 218/461 (47%), Gaps = 29/461 (6%)
Query: 33 PPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPT----QFSQIALGLKNNPHLA 88
PP+ +N++ + S+L H S H + G+ P + S+I L +++
Sbjct: 44 PPTQNPNNIVNLISSILKHKSSNLSLLHSSNNDIKGILPHMGPHEISRILLRCQSDHSSV 103
Query: 89 LRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND-----PKLKL 143
L FF++ ++ +L +Y I+HIL+ +R+ A +++ ++ E + P +
Sbjct: 104 LTFFNWVKNDLNITPTLHNYCVIVHILAWSRVFSHAMNLLSELIQLVEVEGVCVPPNDGI 163
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
+E LV+ +C P +FD+LIK ++ +EK + R + V CN L+
Sbjct: 164 YENLVECTEDCNWNPAIFDMLIKAYVKAGMVEK---GLATFRRNIEACFIPNVIACNCLL 220
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
+SR + + +Y E+ L GI + N +TFN + ++G
Sbjct: 221 SGLSRFNYIGQCWAVYEEMGRL------GIHR----------NAYTFNIMTHVLCKDGDT 264
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
+KV +M G EPD +Y+ L+ +C++RR+ +A L++ M + V +++ + +
Sbjct: 265 DKVTRFLDKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVL 324
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
+ G CE G++ A + F +M G++ V++ LV+GYCR G + + ++M G
Sbjct: 325 MNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGI 384
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
P+ T +++ ++ AL+ + + +F + E Y +LI LC EG+ A
Sbjct: 385 CPDSVTCRLIVEGFARDGKLLSALNTV-VELKRFRIKIPEDLYDYLIVALCIEGRPFAAR 443
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ G+ P + Y+ ++ K NVE A +L+ EM
Sbjct: 444 SFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEM 484
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 107/244 (43%), Gaps = 1/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V ++N L+ G+ REG + + EM G PD + +++ F + ++ A
Sbjct: 349 IDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGICPDSVTCRLIVEGFARDGKLLSAL 408
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
E++ ++ Y+ +I C G A F + G T+ LV
Sbjct: 409 NTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQDGYMPKINTYNKLVESL 468
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ +V+ A+++ ++M ++ +I LC R EA +L+ +V G+ P
Sbjct: 469 CKFNNVEEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEAEGLLE-EMVSSGILPD 527
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ LI G CEE K+++A+ + + E Y+A + + GNV L+
Sbjct: 528 VEISRALINGYCEENKVDKAVSLLKFFANEFQVYDTESYNAVVKVFCDVGNVAELLELQD 587
Query: 483 EMFE 486
++ +
Sbjct: 588 KLLK 591
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 115/276 (41%), Gaps = 23/276 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K++ C ++ ++ G+ TC ++ +R ++S E+
Sbjct: 368 KMQMCRSLLHEMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVEL------------- 414
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
KR R++ ++ L+V EG + +++ G P +Y+ L+ C+
Sbjct: 415 --KRF-RIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQDGYMPKINTYNKLVESLCKF 471
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ EA L EM +++ ++VAY +I C + AE EM SG+
Sbjct: 472 NNVEEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEAEGLLEEMVSSGILPDVEIS 531
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+NGYC VD A+ + + + + ++ CD V E L+ L+ +++
Sbjct: 532 RALINGYCEENKVDKAVSLLKFFANEFQVYDTESYNAVVKVFCDVGNVAELLE-LQDKLL 590
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
K G + ++I GL ++A++ EM+G
Sbjct: 591 KVGYVSNRLTCKYVIHGL------QKAMEQDDEMLG 620
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 202/423 (47%), Gaps = 30/423 (7%)
Query: 91 FFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKT 150
+ SF + + +H+L SY T+IH L +++ A+++I+V + + +F +++T
Sbjct: 4 WLSFPTNSTF-RHTLHSYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAILET 62
Query: 151 YRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
S +VF LI LE + C + R V TC ++ + + K
Sbjct: 63 QGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTR---EHKFWVPFDTCRKVLEHLMKLK 119
Query: 211 GVISGYEIYREVFGLDSDATAGIGK----------DVKRVVRV---------RPNVHTFN 251
+ Y+E+ A+ D++ + V RP+V +FN
Sbjct: 120 YFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFN 179
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
LM G+ R G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM DK
Sbjct: 180 TLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDK 239
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
+ + V + T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A
Sbjct: 240 GLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 299
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
+ ++M KG +P+ + LI C + + A + K R+++ + + +Y LI
Sbjct: 300 QDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRK-RMIQENIRLDDVAYTALIS 358
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
GLC+EG+ +A K+ EM+ G P Y+ I+ + K+G+V + L KEM Q
Sbjct: 359 GLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEM------Q 412
Query: 492 EDG 494
DG
Sbjct: 413 RDG 415
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM G +PD SY+ L+ C+E + A
Sbjct: 276 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAF 335
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G+ + T+ ++N +
Sbjct: 336 EHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEF 395
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ GDV + + +M R G P T VL+
Sbjct: 396 CKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLM 427
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 16/186 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ +++ + ++S+ LS + T N LI+ + + + ++ E+
Sbjct: 260 RVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM------------- 306
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R+ ++P+ ++ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 307 ---RMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQE 363
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R +AEK+ EM + D Y II FC+ G++ + +EM G S VT+
Sbjct: 364 GRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTY 423
Query: 356 EHLVNG 361
L+NG
Sbjct: 424 NVLMNG 429
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 195/414 (47%), Gaps = 33/414 (7%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+H+L SY T+IH+L +++ A+ +IRV + +F +++T S +VF
Sbjct: 10 RHTLDSYCTMIHLLCTHQMLSEAKSLIRVVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
LI LE + C + R V TC ++ + + K + Y E
Sbjct: 70 SGLITAYLESGFLRDAIECYRLTR---EHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEE 126
Query: 222 VFGLDSDATAGI------------GKDVKRVVRV---------RPNVHTFNALMVGFYRE 260
+ LD A + D++ V RP+V +FN LM G+ R
Sbjct: 127 I--LDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRL 184
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G ++ + M G +PD Y+YSVL+ C+E +M +A L++EM DK + + V +
Sbjct: 185 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTF 244
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
T+I G C+ + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 245 TTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 304
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
KG +P+ T LI C + + A + K R+++ + + +Y LI GLC+EG+
Sbjct: 305 KGLKPDKITYTTLIDGCCKEGDLETAFEHRK-RMIQENIRLDDVAYTALISGLCQEGRYL 363
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A KV EM+ G +P Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 364 DAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + +++ +D + G+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ D Y II FC+ G++ + +EM G S V+
Sbjct: 360 GRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVS 418
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 209/470 (44%), Gaps = 66/470 (14%)
Query: 55 KSRWNHLLSL-CRSGLTPTQFSQIALGLK-NNPHLALRFFSFTQHKSLCKHSLSSYATII 112
K WN LL S LT T +Q+ L L + ++ FF + + KHSL S T+I
Sbjct: 23 KGHWNSLLKPNVGSNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHKHSLQSSWTMI 82
Query: 113 HILSRARLIGPARDVI-RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEV 171
H L++ + A++++ R+A+R + P + +V+ + + S + L+ +
Sbjct: 83 HTLAKHKQFKTAQNLLERIAVRDYLSSPSV--LNAVVRIHDDPDSNSQILSWLV---IFY 137
Query: 172 KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA 231
N + + + + G + C L+ +++ + +++Y
Sbjct: 138 ANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVY------------ 185
Query: 232 GIGKDVKRVVRVR--PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
K++VRV PN+H FN L+ + G EK E + EM PD ++Y+ L+
Sbjct: 186 ------KKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLI 239
Query: 290 AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
+++C++ EA + + M V D+V YN++I GFC G M A FRE ++G
Sbjct: 240 SLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE--INGAT 297
Query: 350 SSSVTFEHLVNGYCRAGDVDSA---------------ILVYNDMCRK------------- 381
+ VT+ L++GYCR D++ A ++ YN + RK
Sbjct: 298 PNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRL 357
Query: 382 -------GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
EP+ T LI C + A+ + K ++++ GL P + ++ LI G C
Sbjct: 358 LNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKV-KKKMLEAGLKPDQFTFKALIHGFC 416
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ +++ A + EM+ GF PS YS +D Y + N E L E+
Sbjct: 417 KLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDEL 466
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 119/258 (46%), Gaps = 7/258 (2%)
Query: 240 VVRVR----PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
VVR+ N + L++ + + V+ M G +P ++ +VL+ +
Sbjct: 116 VVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKA 175
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R K++++M V ++ +N +I C+ G++ +AE+ EM + T+
Sbjct: 176 RLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTY 235
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++ YC+ G A+ + + M R G P+ T LI C + R+ EAL + +
Sbjct: 236 NTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE--- 292
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G P +Y LI G C +EEAL+++ M +G P + Y++ + +EG ++
Sbjct: 293 INGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIK 352
Query: 476 MATMLRKEMFENQVRQED 493
A L EM E +V ++
Sbjct: 353 DANRLLNEMSERKVEPDN 370
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ TF AL+ GF + + ++ EM G P +YS L+ + ++
Sbjct: 401 LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVI 460
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L +E+ K + D+ Y +I C+I ++ AE F M G++ SV + L Y
Sbjct: 461 RLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAY 520
Query: 363 CRAGDVDSAILVYNDMCRK 381
+AG +A + ++M ++
Sbjct: 521 FKAGKAIAASDMLDEMDKR 539
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 192/412 (46%), Gaps = 29/412 (7%)
Query: 98 KSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSA 157
S +H+L SY T+IH L +++ A+ +IRV + D +F +++T S
Sbjct: 6 NSTYRHTLHSYCTMIHFLCTHQMLVEAKSLIRVVVSRKGKDSTSAVFAAILETKGTQISD 65
Query: 158 PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
+VF L+ LE + C R+ + V TC ++ + + + +
Sbjct: 66 LYVFSGLMLAYLESGFVRDAIQCF---RLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWG 122
Query: 218 IYREVFGLDSDAT-------------------AGIGKDVKRVVRVRPNVHTFNALMVGFY 258
Y+E+ + A + D +RP+V +FN LM G+
Sbjct: 123 FYKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
R G ++ + M G +PD Y+YSVL+ C+E +M EA ++ EM D + + V
Sbjct: 183 RLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGV 242
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+ T+I G C+ G++ A E +++M G +T+ L+ G CR GD+ A + +M
Sbjct: 243 TFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEM 302
Query: 379 CRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
KG +P+ T LI C D FE L+ R+++ + E +Y LI GLC
Sbjct: 303 IMKGLKPDKITYTTLIDGSCKEGDLEITFE----LRKRMIRENIRLDEVTYTALISGLCR 358
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
EG+ +A K+ EM+ G +P Y+ ++ + K G+V+ A+ L +EM N
Sbjct: 359 EGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRN 410
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G R G + D+ EM G +PD +Y+ L+ C+E + +L
Sbjct: 274 PDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFEL 333
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D V Y +I G C G AE+ REM G++ + T+ ++N +C+
Sbjct: 334 RKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCK 393
Query: 365 AGDVDSAILVYNDMCRKGFEP 385
GDV +A + +M R G P
Sbjct: 394 TGDVKTASKLLREMQRNGPVP 414
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K++ ++I + ++S+G + T N LI+ + R + ++ E+ I K
Sbjct: 256 KVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEM----------IMK 305
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+K P+ T+ L+ G +EG E ++ M R D +Y+ L++ C E
Sbjct: 306 GLK------PDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCRE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ D Y I+ FC+ G++ A + REM +G VT
Sbjct: 360 GRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 135/514 (26%), Positives = 230/514 (44%), Gaps = 70/514 (13%)
Query: 11 FSVSKPK-PKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLL--SLCRS 67
F+ +P P L + T ++P S +A + ++ R W L S
Sbjct: 3 FARHRPHLTNPNFLRKQRTFCASPDSQ----FVACLTDIV---RGNQSWRVALNNSFISQ 55
Query: 68 GLTPTQFSQIALGLKNNPHLALRFFSFTQ-HKSLCKHSLSSYATIIHILSRARLIGPARD 126
L P ++ + ++ LALRFF+F HK+ HS +S+ +IH L ++ L PA
Sbjct: 56 TLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNF-DHSTTSFCILIHALVQSNLYWPASS 114
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECG-SAPFVFDLLIKCCLEVKNIEKIETCVDIVR 185
+++ L N P+ LFE + +YR+C S FDLLI+ V+N +++ V +VR
Sbjct: 115 LLQTLLLRGLN-PE-GLFESFLDSYRKCNFSTTLGFDLLIQT--YVQNRRELDGLV-VVR 169
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
++M G+ ++ T + ++ G+I + + D ++G+ RP
Sbjct: 170 LMMDCGILPQIRTLSGVL------NGLIRIRQFRMALHLFDEIVSSGL----------RP 213
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V+ + A++ F + +V M GC+ +Y+V + C+ +R+ EA ++
Sbjct: 214 DVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIK 273
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-----------------GLS-- 346
+ K + DV Y T++ G C++ E EE EM GL
Sbjct: 274 NLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKK 333
Query: 347 ----------------GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
GV S + L+N C+ G +D A ++N+M KG P T
Sbjct: 334 GNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTY 393
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+LI C + ++ AL L ++ + G+ T Y LI G C+ GK+ A + EM+
Sbjct: 394 SILIDSFCKRGKLDVALHFL-GKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMI 452
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G +P++ IY++ I GY KEG + A L EM
Sbjct: 453 ANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 157/322 (48%), Gaps = 20/322 (6%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF----------- 223
+++ V+I +L +GL V T L+ + + + +G E+ E+
Sbjct: 264 QRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAV 323
Query: 224 -----GLDSDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
GL G D+ V+ V P++ +NAL+ ++G ++ E ++ M
Sbjct: 324 SNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGH 383
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G P+ +YS+L+ FC+ ++ A +M + ++ V Y+++I G C++G++
Sbjct: 384 KGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRA 443
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A+ F EM +G++ + V + L++GYC+ G++ +A +Y++M KG P T LI
Sbjct: 444 AKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALIS 503
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
LC R+ EA + L +V++ + P E +Y LI+G C+EG A ++ EMV KG
Sbjct: 504 GLCHANRMAEA-NKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLV 562
Query: 456 PSLEIYSAFIDGYMKEGNVEMA 477
P Y I G G V A
Sbjct: 563 PDTYTYRPLISGLCSTGRVSEA 584
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 128/256 (50%), Gaps = 7/256 (2%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V ++ V+ +++L+ G + G + ++ EM G +P+ Y+ L++ +C+E +
Sbjct: 419 VGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHN 478
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +L+ EM K + + + +I G C MA A + F EM V + VT+ L+
Sbjct: 479 AFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIE 538
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA---LDILKARVVKF 417
G+C+ G+ A + ++M KG P+ T LI LC RV EA ++ L+ K
Sbjct: 539 GHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKL 598
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
E + L+ G C+EG++++AL EM+G+G L YS I G +++ +
Sbjct: 599 ----NEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSI 654
Query: 478 TMLRKEMFENQVRQED 493
L K+M + +R ++
Sbjct: 655 IDLLKQMHDQGLRPDN 670
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 116/247 (46%), Gaps = 7/247 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN T+N L+ G +EG + ++ EM G PD Y+Y L++ C R+ EA
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +++ + + + + ++ ++ G+C+ G + A + REM GV V + L+ G
Sbjct: 586 EFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGI 645
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI---GELCDKRRVFEALDILKARVVKFGL 419
R D S I + M +G P+ +I + + + F DI+ V G
Sbjct: 646 LRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIM----VSEGC 701
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI GLC+ G M++A + EM+ P+ Y+ F+D EGN+E A
Sbjct: 702 LPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ 761
Query: 480 LRKEMFE 486
L + E
Sbjct: 762 LHDVLLE 768
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 2/247 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N F+AL+ G+ +EG + D EM G D YSVL+ ++ R L
Sbjct: 599 NEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLL 658
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++M D+ + D V Y T+I + G + A + M G + VT+ L+NG C+
Sbjct: 659 KQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKI 718
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G +D A L+ +M P +T + L + + +A+ + V+ G +
Sbjct: 719 GLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL--HDVLLEGFLANTVT 776
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI+G C+ G+++EA +V M+ G P YS I Y + G+++ A L + M
Sbjct: 777 YNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESML 836
Query: 486 ENQVRQE 492
V +
Sbjct: 837 NRGVNPD 843
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 35/252 (13%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
++ L+ G R+ + D+ +M G PD Y+ ++ + ++ A LW+ M
Sbjct: 638 YSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMV 697
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG------------------------- 344
+ +VV Y +I G C+IG M +AE REM
Sbjct: 698 SEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE 757
Query: 345 ---------LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
L G +++VT+ L+ G+C+ G + A V +M G P+ + +I
Sbjct: 758 KAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIY 817
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
E C + + EA+ + ++ + + G+ P +Y FLI G C G++ +A +++ +M+ +G +
Sbjct: 818 EYCRRGDLKEAIKLWESMLNR-GVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVK 876
Query: 456 PSLEIYSAFIDG 467
P+ Y++ I G
Sbjct: 877 PNRATYNSLIHG 888
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 69/126 (54%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+N L+ GF + G ++ +V V M G PDC SYS ++ +C ++EA KLW
Sbjct: 773 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLW 832
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E M ++ V D VAYN +I G C GE+ +A E +M GV+ + T+ L++G C
Sbjct: 833 ESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLM 892
Query: 366 GDVDSA 371
V S
Sbjct: 893 SSVSST 898
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 121/276 (43%), Gaps = 53/276 (19%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG----------- 224
+++ +D R ++ RG+++ + + LI+ + R + S ++ +++
Sbjct: 615 RLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYT 674
Query: 225 --LDSDATAGIGK------DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+D++A AG K D+ PNV T+ AL+ G + G +K E + EM
Sbjct: 675 TMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLAS 734
Query: 277 GCEPD-----CY-----------------------------SYSVLMAVFCEERRMREAE 302
P+ C+ +Y++L+ FC+ R++EA
Sbjct: 735 NSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAA 794
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ M D + D ++Y+TII +C G++ A + + M GV +V + L+ G
Sbjct: 795 EVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGC 854
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
C G++ A + +DM R+G +P +T LI C
Sbjct: 855 CVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 151/268 (56%), Gaps = 3/268 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
SDA+ + ++R ++ PNV TFNAL+ F +EG + E ++ EM + +PD ++YS
Sbjct: 312 SDASRLLSDMIER--KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L+ FC R+ EA+ ++E M K+ +VV YNT+I GFC+ + E FREM
Sbjct: 370 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+ ++VT+ L++G+ +A D D+A +V+ M G P T L+ LC ++ +A
Sbjct: 430 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ + + + + + PT +Y +I+G+C+ GK+E+ + + KG +P + IY+ I
Sbjct: 490 MVVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548
Query: 467 GYMKEGNVEMATMLRKEMFENQVRQEDG 494
G+ ++G E A L ++M E+ + G
Sbjct: 549 GFCRKGLKEEADALFRKMREDGPLPDSG 576
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 2/262 (0%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
D +G+ ++R+ + N++T+N L+ F R + +M +LG EP + S
Sbjct: 102 DLVISLGEKMQRL-GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 160
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ +C +R+ +A L ++M + D + + T+I G + + A M G
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ + VT+ +VNG C+ GD+D A + N M E +I LC R +AL
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++ K G+ P +Y LI LC + +A ++ ++M+ + P++ ++A ID
Sbjct: 281 NLFTEMENK-GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 468 YMKEGNVEMATMLRKEMFENQV 489
++KEG + A L EM + +
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSI 361
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 113/249 (45%), Gaps = 23/249 (9%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
KL++ ++K R F + LI C+ ++++ + +++S+ V T N
Sbjct: 351 KLYDEMIK--RSIDPDIFTYSSLINGFCMH----DRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
LI + K + G E++RE + G N T+ L+ GF++
Sbjct: 405 TLINGFCKAKRIDEGVELFRE---MSQRGLVG-------------NTVTYTTLIHGFFQA 448
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
+ + V+ +M G P+ +Y+ L+ C+ ++ +A ++E ++ +E + Y
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 508
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
N +I G C+ G++ + F + L GV+ + + +++G+CR G + A ++ M
Sbjct: 509 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Query: 381 KGFEPEGST 389
G P+ T
Sbjct: 569 DGPLPDSGT 577
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 62/143 (43%), Gaps = 1/143 (0%)
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
S S + ++ + +D AI ++ M + P L+ + K + F+ +
Sbjct: 48 SGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIA-KMKKFDLVIS 106
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
L ++ + G+ +Y LI C ++ AL + +M+ G+EPS+ S+ ++GY
Sbjct: 107 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 166
Query: 470 KEGNVEMATMLRKEMFENQVRQE 492
+ A L +M E R +
Sbjct: 167 HGKRISDAVALVDQMVEMGYRPD 189
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 194/412 (47%), Gaps = 29/412 (7%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+H+L +Y T+IH L +++ A+ +IR+ + D +F ++ T S +VF
Sbjct: 10 RHTLHTYCTMIHFLCTHQMLLEAKSLIRIVVSRKGKDSASAVFAAILGTKGTQRSDIYVF 69
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
L+ LE + C R+ V TC ++ + + K ++ Y+E
Sbjct: 70 SGLMTAYLESGFVHDAIQCF---RLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFYKE 126
Query: 222 VFGLDSDATAGIGK----------DVKRVVRV---------RPNVHTFNALMVGFYREGA 262
+ A+ +++R V RP+V +FN LM G+ R G
Sbjct: 127 ILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGD 186
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
++ + M G +PD Y+YSVL+ C+E ++ EA +L+ EM D+ + + V + T
Sbjct: 187 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTT 246
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I C+ G + A E +++M G +T+ L+ G C+ GD+ + ++M G
Sbjct: 247 LIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNG 306
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+P+ T LI C + + A + K R++K + +Y L+ GLC+EG+ ++A
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLETAFEFRK-RMIKESIRLDNVAYTALVSGLCQEGRADDA 365
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
K+ EM+ G +P Y+ I+ + K+G+V A+ L KEM Q DG
Sbjct: 366 EKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEM------QRDG 411
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 16/210 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K++ ++ ++ RGL T LI + V S EIY+++ + G
Sbjct: 221 KVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQML------SQGFS- 273
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
P++ T+N L+ G ++G ++V + EM+ G +PD +Y+ L+ C+E
Sbjct: 274 ---------PDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKE 324
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ A + + M +++ D VAY ++ G C+ G AE+ FREM G++ + T+
Sbjct: 325 GDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTY 384
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
++N +C+ GDV +A + +M R G P
Sbjct: 385 TMIINEFCKKGDVRTASRLLKEMQRDGHVP 414
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 135/514 (26%), Positives = 230/514 (44%), Gaps = 70/514 (13%)
Query: 11 FSVSKPK-PKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLL--SLCRS 67
F+ +P P L + T ++P S +A + ++ R W L S
Sbjct: 3 FARHRPHLTNPNFLRKQRTFCASPDSQ----FVACLTDIV---RGNQSWRVALNNSFISQ 55
Query: 68 GLTPTQFSQIALGLKNNPHLALRFFSFTQ-HKSLCKHSLSSYATIIHILSRARLIGPARD 126
L P ++ + ++ LALRFF+F HK+ HS +S+ +IH L ++ L PA
Sbjct: 56 TLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNF-DHSTTSFCILIHALVQSNLYWPASS 114
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECG-SAPFVFDLLIKCCLEVKNIEKIETCVDIVR 185
+++ L N P+ LFE + +YR+C S FDLLI+ V+N +++ V +VR
Sbjct: 115 LLQTLLLRGLN-PE-GLFESFLDSYRKCNFSTTLGFDLLIQ--TYVQNRRELDGLV-VVR 169
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
++M G+ ++ T + ++ G+I + + D ++G+ RP
Sbjct: 170 LMMDCGILPQIRTLSGVL------NGLIRIRQFRMALHLFDEIVSSGL----------RP 213
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V+ + A++ F + +V M GC+ +Y+V + C+ +R+ EA ++
Sbjct: 214 DVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIK 273
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-----------------GLS-- 346
+ K + DV Y T++ G C++ E EE EM GL
Sbjct: 274 NLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKK 333
Query: 347 ----------------GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
GV S + L+N C+ G +D A ++N+M KG P T
Sbjct: 334 GNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTY 393
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+LI C + ++ AL L ++ + G+ T Y LI G C+ GK+ A + EM+
Sbjct: 394 SILIDSFCKRGKLDVALHFL-GKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMI 452
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G +P++ IY++ I GY KEG + A L EM
Sbjct: 453 ANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 157/322 (48%), Gaps = 20/322 (6%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF----------- 223
+++ V+I +L +GL V T L+ + + + +G E+ E+
Sbjct: 264 QRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAV 323
Query: 224 -----GLDSDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
GL G D+ V+ V P++ +NAL+ ++G ++ E ++ M
Sbjct: 324 SNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGH 383
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G P+ +YS+L+ FC+ ++ A +M + ++ V Y+++I G C++G++
Sbjct: 384 KGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRA 443
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A+ F EM +G++ + V + L++GYC+ G++ +A +Y++M KG P T LI
Sbjct: 444 AKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALIS 503
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
LC R+ EA + L +V++ + P E +Y LI+G C+EG A ++ EMV KG
Sbjct: 504 GLCHANRMAEA-NKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLV 562
Query: 456 PSLEIYSAFIDGYMKEGNVEMA 477
P Y I G G V A
Sbjct: 563 PDTYTYRPLISGLCSTGRVSEA 584
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 124/253 (49%), Gaps = 7/253 (2%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V ++ V+ +++L+ G + G + ++ EM G +P+ Y+ L++ +C+E +
Sbjct: 419 VGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHN 478
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +L+ EM K + + + +I G C MA A + F EM V + VT+ L+
Sbjct: 479 AFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIE 538
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA---LDILKARVVKF 417
G+C+ G+ A + ++M KG P+ T LI LC RV EA ++ L+ K
Sbjct: 539 GHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKL 598
Query: 418 ----GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
G P +Y LI GLC+ G M++A + EM+ P+ Y+ F+D EGN
Sbjct: 599 NEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGN 658
Query: 474 VEMATMLRKEMFE 486
+E A L + E
Sbjct: 659 IEKAIQLHDVLLE 671
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 41/291 (14%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV + +L+ G+ +EG ++ EM G P+ Y+++ L++ C RM EA
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEAN 515
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL+ EM + NV + V YN +I G C+ G RA E EM G+ + T+ L++G
Sbjct: 516 KLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGL 575
Query: 363 CRAGDVDSAILVYNDMCRK--------GFEPEGSTIEVLIGELC-----DK-----RRVF 404
C G V A ND+ + G P T LI LC DK R +
Sbjct: 576 CSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREML 635
Query: 405 EA------------LDILKAR-----------VVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
+ LD L + V+ G +Y LI+G C+ G+++E
Sbjct: 636 ASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQE 695
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
A +V M+ G P YS I Y + G+++ A L + M V +
Sbjct: 696 AAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPD 746
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 124/268 (46%), Gaps = 43/268 (16%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
V PN T+N L+ G +EG + ++ EM G PD Y+Y L++ C R+ EA
Sbjct: 525 NVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEA 584
Query: 302 EKLWEEMRDKNVE--------HDVVAYNTIIGGFCEIGEMARAEEFFREMG--------- 344
+ +++ + + +VV Y +I G C+IG M +AE REM
Sbjct: 585 REFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQN 644
Query: 345 -------------------------LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
L G +++VT+ L+ G+C+ G + A V +M
Sbjct: 645 TYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMI 704
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
G P+ + +I E C + + EA+ + ++ + + G+ P +Y FLI G C G++
Sbjct: 705 DSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNR-GVNPDTVAYNFLIYGCCVTGEL 763
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+A +++ +M+ +G +P+ Y++ I G
Sbjct: 764 TKAFELRDDMMRRGVKPNRATYNSLIHG 791
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 69/126 (54%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+N L+ GF + G ++ +V V M G PDC SYS ++ +C ++EA KLW
Sbjct: 676 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLW 735
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E M ++ V D VAYN +I G C GE+ +A E +M GV+ + T+ L++G C
Sbjct: 736 ESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLM 795
Query: 366 GDVDSA 371
V S
Sbjct: 796 SSVSST 801
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 7/173 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEK---VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
PN +T+ + EG EK + DV +E G + +Y++L+ FC+ R++EA
Sbjct: 641 PNQNTYACFLDYLTSEGNIEKAIQLHDVLLE----GFLANTVTYNILIRGFCKLGRIQEA 696
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++ M D + D ++Y+TII +C G++ A + + M GV +V + L+ G
Sbjct: 697 AEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYG 756
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
C G++ A + +DM R+G +P +T LI C V D ++
Sbjct: 757 CCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFSCKL 809
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 152/272 (55%), Gaps = 3/272 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + ++R ++ PNV TF+AL+ F +EG + E ++ EM + +PD
Sbjct: 303 YGRWSDASRLLSNMIER--KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
++YS L+ FC R+ EA+ ++E M K+ +VV YNT+I GFC+ + E FRE
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G+ ++VT+ L+ G +AGD D A ++ M G P+ T +L+ LC +
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ +AL + + + K + P +Y +I+G+C+ GK+E+ + + KG +P++ IY+
Sbjct: 481 LEKALVVFE-YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
I G+ ++G E A L +EM E+ + G
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPDSG 571
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 123/249 (49%), Gaps = 1/249 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+R+ +++++N L+ F R V +M +LG EPD + S L+ +C +R+ +
Sbjct: 109 LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISD 168
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L ++M + + D V +NT+I G + + A +M G + VT+ +VN
Sbjct: 169 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVN 228
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ GD+D A+ + M + E + +I LC + + +A + K G+
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETK-GIR 287
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y LI LC G+ +A ++ + M+ + P++ +SA ID ++KEG + A L
Sbjct: 288 PDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 481 RKEMFENQV 489
EM + +
Sbjct: 348 YDEMIKRSI 356
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 116/236 (49%), Gaps = 1/236 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ +V +N ++ G + + ++ +M G PD ++Y+ L++ C R +A
Sbjct: 250 KIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDA 309
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L M ++ + +VV ++ +I F + G++ AE+ + EM ++ T+ L+NG
Sbjct: 310 SRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C +D A ++ M K P T LI C +RV E +++ + + + GL
Sbjct: 370 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR-EMSQRGLVG 428
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI+GL + G + A K+ +MV G P + YS +DG K G +E A
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 129/263 (49%), Gaps = 3/263 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
S+A A + + V+R +P++ T+ A++ G + G + + +M + E D Y+
Sbjct: 202 SEAVALVDQMVQR--GCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 259
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ C+ + + +A L+ +M K + DV YN++I C G + A M
Sbjct: 260 TIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIER 319
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
+ + VTF L++ + + G + A +Y++M ++ +P+ T LI C R+ EA
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ + + K FP +Y LIKG C+ ++EE +++ EM +G + Y+ I
Sbjct: 380 KHMFELMISK-DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 467 GYMKEGNVEMATMLRKEMFENQV 489
G + G+ +MA + K+M + V
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGV 461
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 123/264 (46%), Gaps = 21/264 (7%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
D +FE+++ ++C ++ LIK + K ++E +++ R + RGL
Sbjct: 377 DEAKHMFELMIS--KDCFPNVVTYNTLIKGFCKAK---RVEEGMELFREMSQRGLVGNTV 431
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T N LI + + +I++++ SD V P++ T++ L+ G
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMV---SDG-------------VPPDIITYSILLDGL 475
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G EK V+ + + EPD Y+Y++++ C+ ++ + L+ + K V+ +V
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
+ Y T+I GFC G A+ FREM G S + L+ R GD ++ + +
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKE 595
Query: 378 MCRKGFEPEGSTIEVLIGELCDKR 401
M GF + STI ++I L D R
Sbjct: 596 MRSCGFVGDASTISMVINMLHDGR 619
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 140/303 (46%), Gaps = 27/303 (8%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
KL++ ++K R F + LI C+ ++++ + +++S+ V T N
Sbjct: 346 KLYDEMIK--RSIDPDIFTYSSLINGFCMH----DRLDEAKHMFELMISKDCFPNVVTYN 399
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
LI + K V G E++RE + G N T+N L+ G ++
Sbjct: 400 TLIKGFCKAKRVEEGMELFRE---MSQRGLVG-------------NTVTYNTLIQGLFQA 443
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G + + ++ +M G PD +YS+L+ C+ ++ +A ++E ++ +E D+ Y
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
N +I G C+ G++ + F + L GV+ + + + +++G+CR G + A ++ +M
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Query: 381 KGFEPEGSTIEVLI-GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
G P+ LI L D + A I + R F + S + ++ + +G++
Sbjct: 564 DGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCG---FVGDASTISMVINMLHDGRL 620
Query: 440 EEA 442
E++
Sbjct: 621 EKS 623
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 103/213 (48%), Gaps = 1/213 (0%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P ++ L++ + ++ L E M++ + +D+ +YN +I FC ++ A
Sbjct: 78 PSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+M G E VT L+NGYC + + A+ + + M G++P+ T LI L
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFL 197
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+ EA+ ++ ++V+ G P +Y ++ GLC+ G ++ AL + +M E +
Sbjct: 198 HNKASEAVALVD-QMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
IY+ IDG K +++ A L +M +R +
Sbjct: 257 IYNTIIDGLCKYKHIDDAFALFNKMETKGIRPD 289
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 169/322 (52%), Gaps = 17/322 (5%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
N + + +++ + ++G+ V T N+LI + +G SDA+
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN--------------YGRWSDASRL 312
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+ ++R ++ PNV TF+AL+ F +EG + E ++ EM + +PD ++YS L+ F
Sbjct: 313 LSDMIER--KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C R+ EA+ ++E M K+ +VV YNT+I GFC+ + E FREM G+ ++
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ L+ G +AGD D A ++ M G P+ T +L+ LC ++ +AL + +
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE- 489
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ K + P +Y +I+G+C+ GK+E+ + + KG +P++ IY+ I G+ ++G
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Query: 473 NVEMATMLRKEMFENQVRQEDG 494
E A L +EM E+ G
Sbjct: 550 LKEEADALFREMKEDGTLPNSG 571
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 125/249 (50%), Gaps = 1/249 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+R+ +++++N L+ F R V +M +LG EPD + S L+ +C +R+ E
Sbjct: 109 LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 168
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L ++M + + V +NT+I G + + A M G + T+ +VN
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 228
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ GD+D A+ + M + E + +I LC+ + V +AL++ K G+
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIR 287
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y LI+ LC G+ +A ++ ++M+ + P++ +SA ID ++KEG + A L
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 481 RKEMFENQV 489
EM + +
Sbjct: 348 YDEMIKRSI 356
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 125/285 (43%), Gaps = 36/285 (12%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS--------------- 284
V+ +PN TFN L+ G + + + M GC+PD ++
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 285 --------------------YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
Y+ ++ C + + +A L+ EM +K + +VV YN++I
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
C G + A +M + + VTF L++ + + G + A +Y++M ++ +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P+ T LI C R+ EA + + + K FP +Y LIKG C+ ++EE ++
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ EM +G + Y+ I G + G+ +MA + K+M + V
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 125/264 (47%), Gaps = 21/264 (7%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
D +FE+++ ++C ++ LIK + K ++E +++ R + RGL
Sbjct: 377 DEAKHMFELMIS--KDCFPNVVTYNTLIKGFCKAK---RVEEGMELFREMSQRGLVGNTV 431
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T N LI + + +I++++ SD V P++ T++ L+ G
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMV---SDG-------------VPPDIITYSILLDGL 475
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G EK V+ + + EPD Y+Y++++ C+ ++ + L+ + K V+ +V
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
+ Y T+I GFC G A+ FREM G +S T+ L+ R GD ++ + +
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 595
Query: 378 MCRKGFEPEGSTIEVLIGELCDKR 401
M GF + STI ++I L D R
Sbjct: 596 MRSCGFVGDASTISMVINMLHDGR 619
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 1/223 (0%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
D++ EM + P ++ L++ + + L E M++ + +D+ +YN +I F
Sbjct: 66 DLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCF 125
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C ++ A +M G E VT L+NGYC + A+ + + M ++P
Sbjct: 126 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNT 185
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI L + EA+ ++ R+V G P +Y ++ GLC+ G ++ AL +
Sbjct: 186 VTFNTLIHGLFLHNKASEAVALID-RMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 244
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+M E + IY+ ID NV A L EM +R
Sbjct: 245 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
++ +A L+ EM +V +N ++ ++ + M + ++
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L+N +CR + A+ V M + G+EP+ T+ L+ C +R+ EA+ ++ V
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV- 178
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
P ++ LI GL K EA+ + MV +G +P L Y ++G K G++++
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 477 ATMLRKEMFENQVRQE 492
A L K+M + ++ +
Sbjct: 239 ALSLLKKMEKGKIEAD 254
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 169/322 (52%), Gaps = 17/322 (5%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
N + + +++ + ++G+ V T N+LI + +G SDA+
Sbjct: 251 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN--------------YGRWSDASRL 296
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+ ++R ++ PNV TF+AL+ F +EG + E ++ EM + +PD ++YS L+ F
Sbjct: 297 LSDMIER--KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 354
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C R+ EA+ ++E M K+ +VV YNT+I GFC+ + E FREM G+ ++
Sbjct: 355 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 414
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ L+ G +AGD D A ++ M G P+ T +L+ LC ++ +AL + +
Sbjct: 415 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE- 473
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ K + P +Y +I+G+C+ GK+E+ + + KG +P++ IY+ I G+ ++G
Sbjct: 474 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 533
Query: 473 NVEMATMLRKEMFENQVRQEDG 494
E A L +EM E+ G
Sbjct: 534 LKEEADALFREMKEDGTLPNSG 555
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 125/249 (50%), Gaps = 1/249 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+R+ +++++N L+ F R V +M +LG EPD + S L+ +C +R+ E
Sbjct: 93 LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 152
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L ++M + + V +NT+I G + + A M G + T+ +VN
Sbjct: 153 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 212
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ GD+D A+ + M + E + +I LC+ + V +AL++ K G+
Sbjct: 213 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIR 271
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y LI+ LC G+ +A ++ ++M+ + P++ +SA ID ++KEG + A L
Sbjct: 272 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 331
Query: 481 RKEMFENQV 489
EM + +
Sbjct: 332 YDEMIKRSI 340
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 125/285 (43%), Gaps = 36/285 (12%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS--------------- 284
V+ +PN TFN L+ G + + + M GC+PD ++
Sbjct: 162 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 221
Query: 285 --------------------YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
Y+ ++ C + + +A L+ EM +K + +VV YN++I
Sbjct: 222 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 281
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
C G + A +M + + VTF L++ + + G + A +Y++M ++ +
Sbjct: 282 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 341
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P+ T LI C R+ EA + + + K FP +Y LIKG C+ ++EE ++
Sbjct: 342 PDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRVEEGME 400
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ EM +G + Y+ I G + G+ +MA + K+M + V
Sbjct: 401 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 445
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 125/264 (47%), Gaps = 21/264 (7%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
D +FE+++ ++C ++ LIK + K ++E +++ R + RGL
Sbjct: 361 DEAKHMFELMIS--KDCFPNVVTYNTLIKGFCKAK---RVEEGMELFREMSQRGLVGNTV 415
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T N LI + + +I++++ SD V P++ T++ L+ G
Sbjct: 416 TYNTLIQGLFQAGDCDMAQKIFKKMV---SDG-------------VPPDIITYSILLDGL 459
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G EK V+ + + EPD Y+Y++++ C+ ++ + L+ + K V+ +V
Sbjct: 460 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 519
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
+ Y T+I GFC G A+ FREM G +S T+ L+ R GD ++ + +
Sbjct: 520 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 579
Query: 378 MCRKGFEPEGSTIEVLIGELCDKR 401
M GF + STI ++I L D R
Sbjct: 580 MRSCGFVGDASTISMVINMLHDGR 603
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 1/223 (0%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
D++ EM + P ++ L++ + + L E M++ + +D+ +YN +I F
Sbjct: 50 DLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCF 109
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C ++ A +M G E VT L+NGYC + A+ + + M ++P
Sbjct: 110 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNT 169
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI L + EA+ ++ R+V G P +Y ++ GLC+ G ++ AL +
Sbjct: 170 VTFNTLIHGLFLHNKASEAVALID-RMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 228
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+M E + IY+ ID NV A L EM +R
Sbjct: 229 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 271
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
++ +A L+ EM +V +N ++ ++ + M + ++
Sbjct: 44 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L+N +CR + A+ V M + G+EP+ T+ L+ C +R+ EA+ ++ V
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV- 162
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
P ++ LI GL K EA+ + MV +G +P L Y ++G K G++++
Sbjct: 163 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 222
Query: 477 ATMLRKEMFENQVRQE 492
A L K+M + ++ +
Sbjct: 223 ALSLLKKMEKGKIEAD 238
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 185/387 (47%), Gaps = 43/387 (11%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C +L +Y ++ L + ++G A+DV VK E G AP V
Sbjct: 210 CPPNLVTYNVLVDALCKLSMVGAAQDV--------------------VKKMIEGGFAPNV 249
Query: 161 --FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
F+ L+ + N++ + I ++++G+ V T +ALI + + + + E+
Sbjct: 250 MTFNSLVDGFCKRGNVDDARKLLGI---MVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV 306
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
E+ + V P+ T++AL+ G + E+ E + MA GC
Sbjct: 307 LEEM----------------KTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGC 350
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
PD YS ++ FC+ ++ EA+K +EMR + DVV YNT+I G C++G++A A+
Sbjct: 351 TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQV 410
Query: 339 FFREMGLSG-VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+M SG V VT+ ++NG C++ + A + + MC+ G P+ T +I L
Sbjct: 411 ILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGL 470
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C R+ EA +L+ + + G P +Y LI GLC+ K++EA +V EM G P+
Sbjct: 471 CKCGRLEEAEYLLQG-MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPN 529
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEM 484
L Y+ ++G G ++ A L + M
Sbjct: 530 LVTYNTMVNGLCVSGRIKEAQQLVQRM 556
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 210/487 (43%), Gaps = 41/487 (8%)
Query: 34 PSDQSHNLIATVVSLLTHHRSKSRWNHLLS-LCRSGLTPTQFSQIALGLKNNPHLALRFF 92
P D + +++LL R S LS + TP ++ LK+ LAL FF
Sbjct: 5 PIDDIPRTVTAILNLLHSGRPWSAIEPDLSPFSGASTTPRIVGRVVNSLKD-AKLALAFF 63
Query: 93 SFTQHK-SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY 151
+ H+ S+ +++ +L R + A D+ R L + +P + + +++ +
Sbjct: 64 RWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLA-SCEPDVCSYNIVISGF 122
Query: 152 RECG-------------SAPFVFDLLIKCCL--EVKNIEKIETCVDIVRMLMSRGLSVKV 196
G SA F D + + N ++ +D +R S G V
Sbjct: 123 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLR---SMGCDPNV 179
Query: 197 STCNALIWEVSRGKGVISGYEIYREV-----------FGLDSDA-----TAGIGKDV-KR 239
T ALI +R K + ++ E+ + + DA G +DV K+
Sbjct: 180 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 239
Query: 240 VVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
++ PNV TFN+L+ GF + G + + M G P+ +YS L+ C+ ++
Sbjct: 240 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 299
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
EA+++ EEM+ + V D Y+ +I G C+ ++ AE+ R M SG V +
Sbjct: 300 FLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 359
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
+++ +C++G + A +M ++ P+ T +I LC ++ EA IL+
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ P +Y +I GLC+ + EA K+ M G P + Y+ IDG K G +E A
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479
Query: 478 TMLRKEM 484
L + M
Sbjct: 480 EYLLQGM 486
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 4/182 (2%)
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W H ++N+++ + A + FR L+ E ++ +++G+C
Sbjct: 65 WAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCN 124
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AGD+ +A+ + +M GF P+ T +I + + + A+D L++ G P
Sbjct: 125 AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRS----MGCDPNVV 180
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI K+EEA+K+ EM +G P+L Y+ +D K V A + K+M
Sbjct: 181 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 240
Query: 485 FE 486
E
Sbjct: 241 IE 242
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 194/412 (47%), Gaps = 29/412 (7%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+H+L SY T+IH L +++ A+ +I+V + +F +++T S +VF
Sbjct: 16 RHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETRGTQRSDIYVF 75
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
LI LE + C + R V + TC ++ + + K + Y E
Sbjct: 76 SGLITAYLESGFLRDAIECYRLTR---EHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEE 132
Query: 222 VFGLD----------------SDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGA 262
+ D + + V + +RP+V ++N LM G+ R G
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
++ + M G +PD Y+YSVL+ C+E +M +A +L++EM K + + V + T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 252
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M KG
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 312
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+P+ T LI C + + A + K R+++ + E +Y LI GLC+EG+ +A
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDSAFEHRK-RMIQENIRLDEVAYTALISGLCQEGRSVDA 371
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
K+ EM+ G +P Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 372 EKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM------QRDG 417
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 80/152 (52%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ + EM+ G +PD +Y+ L+ C+E + A
Sbjct: 278 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAF 337
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ + T+ ++N +
Sbjct: 338 EHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEF 397
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ GDV + +M R G P T VL+
Sbjct: 398 CKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + + + E+
Sbjct: 262 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM------------- 308
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
V ++P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 309 ---SVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRL----DEVAYTALISG 361
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM ++ D Y II FC+ G++ + + +EM G S
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 422 VVTYNVLMNG 431
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 193/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L ++I A+ +I++ + +F J++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAXJLETKGTQISDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLIIAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M +A +L+EEM D + + V
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C K E + R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGSC-KEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++ ++I + ++S+ LS + T N LI+ + + + ++ +D + G+
Sbjct: 256 RVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E M + D +Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 200/425 (47%), Gaps = 31/425 (7%)
Query: 91 FFSF--TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ + S +H+L SY T+IH L +++ A+ +I+V + +F ++
Sbjct: 3 FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIL 62
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+T S +VF LI LE + C + R L V TC ++ + +
Sbjct: 63 ETKGTQRSDIYVFSGLITGYLESGFLRDAIECYRLTR---ENKLCVPFDTCRKVLEHLMK 119
Query: 209 GKGVISGYEIYREVFGLD----------------SDATAGIGKDVKRVVR---VRPNVHT 249
K + Y E+ D + + V + +RP+V +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N LM G+ R G ++ + M G +PD Y+YSVL+ C+E +M +A KL++EM
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEML 239
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + + V + T+I G C+ G + A E +++M + +T+ L+ G C+ GD+
Sbjct: 240 VKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + ++M KG +P+ T LI C + + A + K R+++ + + +Y L
Sbjct: 300 QANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRK-RMIQENIRLDDVAYTAL 358
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I GLC+EG+ +A K+ EM+ G +P Y+ I+ + K+G+V + L KEM
Sbjct: 359 ISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM----- 413
Query: 490 RQEDG 494
Q DG
Sbjct: 414 -QRDG 417
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 80/150 (53%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++ D+ EM+ G +PD +Y+ L+ C+E + A +
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEH 339
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C+ G AE+ REM G++ + T+ ++N +C+
Sbjct: 340 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCK 399
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 400 KGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ L + T N LI+ + + + ++ +D + G+
Sbjct: 262 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDL------IDEMSMKGL-- 313
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 314 --------QPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL----DDVAYTALISG 361
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM ++ D Y II FC+ G++ + + +EM G S
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 422 VVTYNVLMNG 431
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 195/409 (47%), Gaps = 25/409 (6%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
H++ SY + HIL AR+ A ++R + S + +F+ L T C VF
Sbjct: 7 NHTIESYCIVAHILFCARMYYDANSILREIVLSKAELEECDVFDELWSTRNVCVPGFGVF 66
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
D L +++ +E+ C ++ + K +CN L+ + ++ +++
Sbjct: 67 DALFSVLIDLGMLEEATQCFSKMKRFR---VFPKTRSCNGLLHKFAKLGKTDGVKRFFKD 123
Query: 222 VFGL--------------------DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
+ G D +A G+ +++K + P+ T+N+++ G+ + G
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMK-FRGLIPDTVTYNSMIDGYGKVG 182
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ + EM + CEPD +Y+ L+ FC+ ++ + + + EM+ ++ +VV+Y+
Sbjct: 183 RLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYS 242
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
T++ FC+ M +A +F+ +M G + T+ LV+ C+ G++ A + N+M
Sbjct: 243 TLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEV 302
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G E T LI LCD R+ EA + L ++V G+ P SY LI G + M+
Sbjct: 303 GVEWNVVTYTALIDGLCDAERMKEA-EKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDR 361
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
AL++ E+ G+G +P L +Y FI G +E A ++ EM EN ++
Sbjct: 362 ALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIK 410
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 127/246 (51%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V NV T+ AL+ G ++ E ++ +M G P+ SY+ L+ F + + M
Sbjct: 302 VGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDR 361
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +L E++ + ++ D++ Y T I G C + ++ A+ EM +G++++++ + L++
Sbjct: 362 ALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMD 421
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
Y ++G+ + + +M E T VLI LC + V +A+D FGL
Sbjct: 422 AYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQ 481
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P Y +I GLC+E +++ A + +M +G P Y++ +DG +K+GN+ A L
Sbjct: 482 PNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALAL 541
Query: 481 RKEMFE 486
R +M E
Sbjct: 542 RDKMAE 547
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 118/248 (47%), Gaps = 2/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN+ ++NAL+ GF + ++ ++ E+ G +PD Y + C ++ A+
Sbjct: 339 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAK 398
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EM++ ++ + + Y T++ + + G EM E + VTF L++G
Sbjct: 399 VVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGL 458
Query: 363 CRAGDVDSAILVYNDMCRK-GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ V AI + M G +P + +I LC + +V +A L ++ + GL P
Sbjct: 459 CKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQV-KAATTLFEQMAQEGLVP 517
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y L+ G ++G M EAL ++ +M G + L Y++ + G+ + ++ A
Sbjct: 518 DRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFL 577
Query: 482 KEMFENQV 489
+EM ++
Sbjct: 578 EEMIGEEI 585
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 110/260 (42%), Gaps = 41/260 (15%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
+L+SY +IH +A+ + A +++ L+ P L L+ + + CG
Sbjct: 342 NLASYNALIHGFVKAKNMDRALELLN-ELKGRGIQPDLLLYGTFI--WGLCG-------- 390
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
+EKIE ++ + G+ L+ + G + E+
Sbjct: 391 ----------LEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQ 440
Query: 224 GLDSDATA--------GIGKD--VKRVVR----------VRPNVHTFNALMVGFYREGAF 263
LD + T G+ K+ V + + ++PN + A++ G +E
Sbjct: 441 ELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQV 500
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
+ ++ +MA+ G PD +Y+ LM ++ M EA L ++M + ++ D++AY ++
Sbjct: 501 KAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSL 560
Query: 324 IGGFCEIGEMARAEEFFREM 343
+ GF + ++ +A F EM
Sbjct: 561 VWGFSQCNQLQKARSFLEEM 580
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 223/481 (46%), Gaps = 35/481 (7%)
Query: 14 SKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQ 73
S+P P S S SS+T P + + I+ ++S T RS S +HL+ L P
Sbjct: 30 SQPHPS----SPLSISSNTDPFPELVSKISIILSSPTWERS-SELSHLIP----KLKPHH 80
Query: 74 FSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALR 133
+ L NN LRFF + KH +S + ++++ L R RL PA +V + ++
Sbjct: 81 VVNL-LDTHNNTESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLFVPADNVRILMIK 139
Query: 134 SPENDPKLK-LFEVL--VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSR 190
S N+ ++K + +VL + T + G + F L+ +++ + D+ +++
Sbjct: 140 SCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLL---IQLGKFDMDGLGRDVYIEMLNS 196
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYE-IYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
G+ + T NA+I ++ KG + E I +F + P+ T
Sbjct: 197 GIRPNLFTFNAMI-KILCNKGKVQEAELIMGHIFHYGA----------------CPDTFT 239
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ +L++G + G + +++ M + GC+P+ +YS L+ C E R+ EA + EEM
Sbjct: 240 YTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMI 299
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
DK +E V AY I C+ G A + +M G + T+ L++G R G +
Sbjct: 300 DKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFE 359
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
AI VY+ M G P T LI +L + R AL I + + L P ++Y +
Sbjct: 360 VAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSL-PNTETYNVI 418
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
IKG C G +++A + +M+ G P++ Y+ I Y K+G + A L + M N +
Sbjct: 419 IKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGL 478
Query: 490 R 490
+
Sbjct: 479 K 479
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 144/314 (45%), Gaps = 17/314 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K E + + +++ GL T +ALI ++ + I+ + DS
Sbjct: 357 KFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDS-------- 408
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
PN T+N ++ GF G +K ++ +M + G P+ +Y++++ ++ ++
Sbjct: 409 --------LPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQ 460
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
M A +L E M+ ++ D Y +I GF G++ A F EM G+ + VT+
Sbjct: 461 GYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTY 520
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
++NGY VD A+ ++ M G P T ++I R+ EA + ++V
Sbjct: 521 NAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFC-GKMV 579
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K GL P +Y I GLC+ G+ A K+ EM + + P+L YS+ IDG +EG E
Sbjct: 580 KQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAE 639
Query: 476 MATMLRKEMFENQV 489
A L + E V
Sbjct: 640 DAERLLDDGCEPNV 653
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 167/376 (44%), Gaps = 41/376 (10%)
Query: 134 SPENDPKLKLFEVLVKTYRECG---SAPFVFDLLIKCCLEVKNIEK------------IE 178
S ++ P + + V++K + G A +FD ++K I +
Sbjct: 405 SHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMN 464
Query: 179 TCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK 238
+ ++ M+ GL + T LI SRG + + ++ E+ GI
Sbjct: 465 NAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEM------VEHGIS---- 514
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
PNV T+NA++ G+ + ++ +M G P +Y+++++ F + R+
Sbjct: 515 ------PNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRI 568
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EAE +M + + +V+ Y + I G C+ G + A + F EM + T+ L
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSL 628
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++G C+ G + A + +D C EP T L+ LC K R +EA D L + K G
Sbjct: 629 IDGLCQEGQAEDAERLLDDGC----EPNVDTYTTLVRGLCGKGRCYEA-DQLVESMKKKG 683
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI-----DGYMKEGN 473
L P+E+ Y L+ G C+ ++E ALK+ MV GF+P L Y A I + ++
Sbjct: 684 LQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQ 743
Query: 474 VEMATMLRKEMFENQV 489
TML+K ++V
Sbjct: 744 CMFQTMLKKHWNSDEV 759
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+++L+ G +EG E E + + GCEP+ +Y+ L+ C + R EA++L
Sbjct: 620 PNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQL 675
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M+ K ++ Y ++ G C+ E+ A + F M +G + ++ L+ C+
Sbjct: 676 VESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCK 735
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
A A ++ M +K + + VL+ L + +L++L
Sbjct: 736 ANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELL 781
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 195/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L ++I A+ +I++ + +F J++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMIXEAKTLIQIVVSRKGKGSASAVFAAJLETKGTQISDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC +J + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM D + + V
Sbjct: 184 LGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGHLETAFEYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM+ G +PD +Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + + +M R G+ P
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYVP 414
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ E+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM------------- 302
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ ++P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 303 ---SMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 208/470 (44%), Gaps = 66/470 (14%)
Query: 55 KSRWNHLLSL-CRSGLTPTQFSQIALGLK-NNPHLALRFFSFTQHKSLCKHSLSSYATII 112
K WN LL S LT T +Q+ L L + ++ FF + + HSL S T+I
Sbjct: 23 KGHWNSLLKPNVGSNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHXHSLQSSWTMI 82
Query: 113 HILSRARLIGPARDVI-RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEV 171
H L++ + A++++ R+A+R + P + +V+ + + S + L+ +
Sbjct: 83 HTLAKHKQFKTAQNLLERIAVRDYLSSPSV--LNAVVRIHDDPDSNSQILSWLV---IFY 137
Query: 172 KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA 231
N + + + + G + C L+ +++ + +++Y
Sbjct: 138 ANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVY------------ 185
Query: 232 GIGKDVKRVVRVR--PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
K++VRV PN+H FN L+ + G EK E + EM PD ++Y+ L+
Sbjct: 186 ------KKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLI 239
Query: 290 AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
+++C++ EA + + M V D+V YN++I GFC G M A FRE ++G
Sbjct: 240 SLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE--INGAT 297
Query: 350 SSSVTFEHLVNGYCRAGDVDSA---------------ILVYNDMCRK------------- 381
+ VT+ L++GYCR D++ A ++ YN + RK
Sbjct: 298 PNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRL 357
Query: 382 -------GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
EP+ T LI C + A+ + K ++++ GL P + ++ LI G C
Sbjct: 358 LNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKV-KKKMLEAGLKPDQFTFKALIHGFC 416
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ +++ A + EM+ GF PS YS +D Y + N E L E+
Sbjct: 417 KLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDEL 466
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 119/258 (46%), Gaps = 7/258 (2%)
Query: 240 VVRVR----PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
VVR+ N + L++ + + V+ M G +P ++ +VL+ +
Sbjct: 116 VVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKA 175
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R K++++M V ++ +N +I C+ G++ +AE+ EM + T+
Sbjct: 176 RLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTY 235
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++ YC+ G A+ + + M R G P+ T LI C + R+ EAL + +
Sbjct: 236 NTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE--- 292
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G P +Y LI G C +EEAL+++ M +G P + Y++ + +EG ++
Sbjct: 293 INGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIK 352
Query: 476 MATMLRKEMFENQVRQED 493
A L EM E +V ++
Sbjct: 353 DANRLLNEMSERKVEPDN 370
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ TF AL+ GF + + ++ EM G P +YS L+ + ++
Sbjct: 401 LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVI 460
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L +E+ K + D+ Y +I C+I ++ AE F M G++ SV + L Y
Sbjct: 461 RLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAY 520
Query: 363 CRAGDVDSAILVYNDMCRK 381
+AG +A + ++M ++
Sbjct: 521 FKAGKAIAASDMLDEMDKR 539
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 222/481 (46%), Gaps = 33/481 (6%)
Query: 21 QLLSQFSTSSST-------PPSDQSHNLIATVVSLLTHHRSKSRWNHL-LSLCRSGLTPT 72
Q L+Q T+S + P + +N++ + S L H S H ++ L
Sbjct: 87 QTLNQSQTNSISNSLYHLLPQTQNPNNIVNLICSNLKQHNSNLALLHTEVNALLPHLGAQ 146
Query: 73 QFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVAL 132
+ S++ L +++ AL FF++ ++ + S +Y I+H L+ +R A + +
Sbjct: 147 EISRVLLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIIVHTLAWSRNFSQAIKFLCELV 206
Query: 133 RSPEND-PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRG 191
++D P +F+ L+ +C P VFD+L+K L + ++ + R ++ G
Sbjct: 207 ELVKDDLPGEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMG---RVREGLRSFRRMLRVG 263
Query: 192 LSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATAGIGKDVKRVVRVRPNVHT 249
V T N L+ + + +E+Y E+ FG + PN++T
Sbjct: 264 FVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFG------------------IAPNLYT 305
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
FN L ++G KV +M G +PD +Y+ L+ +C + R+ +A L++ M
Sbjct: 306 FNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMY 365
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ V D+V+Y ++ G C+ G + A + F M G+ VT+ L++GYC+ G +
Sbjct: 366 RRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQ 425
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+ + +DM G P+ T VL+ + + AL+++ + +FG+ ++ Y +L
Sbjct: 426 ESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLV-VELQRFGVSISQDIYSYL 484
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I LC E + A + M G + LEIY+ I + + + A +L+ EM + ++
Sbjct: 485 IVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEI 544
Query: 490 R 490
+
Sbjct: 545 K 545
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 102/239 (42%), Gaps = 1/239 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T L+ G+ +EG F ++ VE+ R G YS L+ C E R A+
Sbjct: 439 ISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAK 498
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L E M + ++ YN +I FC+ +A A EM ++ + T+ ++
Sbjct: 499 NLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCL 558
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
R + +M G P+ L C + + +A +L +F + T
Sbjct: 559 SRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDT 618
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
E S+ LI+ +G + +L++Q M+ G P+ IDG K V+ A++++
Sbjct: 619 E-SFNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVIDGLWKARRVDSASLMK 676
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 193/410 (47%), Gaps = 29/410 (7%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
+L SY T+IH L +++ A+ +I+V + +F +++T S +VF
Sbjct: 1 TLDSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 60
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
LI LE + C + R V TC ++ + + K + Y E+
Sbjct: 61 LITAYLESGFLRDAIECYRLTR---EHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEIL 117
Query: 224 GLDSDAT----------------AGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFE 264
A+ + + V + +RP+V +FN LM G+ R G +
Sbjct: 118 ECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLD 177
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ + M G +PD Y+YSVL+ C+E +M +A +L++EM DK + + V + T+I
Sbjct: 178 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLI 237
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M KG +
Sbjct: 238 DGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK 297
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P+ T LI C + + A + K R+++ + + +Y LI GLC+EG+ +A K
Sbjct: 298 PDKITYTTLIDGCCKEGDLETAFEHRK-RMIQENIRLDDVAYTALISGLCQEGRYLDAEK 356
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
V EM+ G +P Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 357 VLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 400
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 83/152 (54%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ D+ EM+ G +PD +Y+ L+ C+E + A
Sbjct: 261 LSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAF 320
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM +G++ + T+ ++N +
Sbjct: 321 EHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEF 380
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ GDV + + +M R G P T VL+
Sbjct: 381 CKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLM 412
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + +++ +D + G+
Sbjct: 245 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDL------IDEMSMKGL-- 296
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 297 --------KPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQE 348
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R +AEK+ EM ++ D Y II FC+ G++ + +EM G S VT+
Sbjct: 349 GRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTY 408
Query: 356 EHLVNG 361
L+NG
Sbjct: 409 NVLMNG 414
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 195/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+VF LI LE + C R+ V TC ++ + + K +
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 219 YRE----------------VFGLDSDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYR 259
Y E + G + + + V + +RP+V +FN LM G+ +
Sbjct: 124 YEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G + + M G +PD Y+YSVL+ C+E +M +A L++EM DK + + V
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM G +PD +Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + + +M R G++P
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYKP 414
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ E+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI------------ 303
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ ++P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 304 ----MKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G + S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 200/427 (46%), Gaps = 52/427 (12%)
Query: 91 FFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL----FEV 146
F S ++ L K+ Y+ IIH+L+ A+L AR ++R ++ +N + ++ F V
Sbjct: 57 FHSVSRRADLAKNP-QLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNV 115
Query: 147 LVKTYRECGSAPFVFDLLIKCCLEVKNIE-----------------------------KI 177
L + P VF +LI E+ +E +
Sbjct: 116 LSR-LESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRF 174
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
+T + +++RG S V T LI R + + ++ E+ I K
Sbjct: 175 DTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEM----------IEK-- 222
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
++ P V + L+ G E + E ++ M G P+ Y+Y+ +M +C+
Sbjct: 223 ----KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAH 278
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+++A +L++EM + +VV + +I G C+ EM A +F +M GV + +
Sbjct: 279 VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++GYC+AG++ A+ +++++ + P+ T +LI LC R+ EA D L + K
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA-DGLLQEMKKK 397
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P +Y LI G C+EG ME+A++V ++M KG EP++ +S IDGY K G +E A
Sbjct: 398 GFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAA 457
Query: 478 TMLRKEM 484
L EM
Sbjct: 458 MGLYTEM 464
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 162/327 (49%), Gaps = 22/327 (6%)
Query: 121 IGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIE 178
I P + + +R + ++ E + +T R G P + ++ ++ ++ +++K
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK-- 281
Query: 179 TCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK 238
+++ + ++ GL V T LI + + ++S + F +D A G
Sbjct: 282 -ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARK-----FLID---MASFG---- 328
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
V PN+ +N L+ G+ + G + + E+ + PD ++YS+L+ C RM
Sbjct: 329 ----VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EA+ L +EM+ K + V YNT+I G+C+ G M +A E +M G+E + +TF L
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++GYC+AG +++A+ +Y +M KG P+ LI EA + K + + G
Sbjct: 445 IDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHK-EMQEAG 503
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKV 445
L P + LI GLC++G++ +A+K+
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKL 530
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K + P ++ ++ GL ++G+ + KV +MV +G P++ Y IDG ++G+
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 476 MATMLRKEMFENQV 489
A L EM E ++
Sbjct: 211 KAFRLFDEMIEKKI 224
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 185/387 (47%), Gaps = 43/387 (11%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C +L +Y ++ L + ++G A+DV VK E G AP V
Sbjct: 88 CPPNLVTYNVLVDALCKLSMVGAAQDV--------------------VKKMIEGGFAPNV 127
Query: 161 --FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
F+ L+ + N++ + I ++++G+ V T +ALI + + + + E+
Sbjct: 128 MTFNSLVDGFCKRGNVDDARKLLGI---MVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV 184
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
E+ + V P+ T++AL+ G + E+ E + MA GC
Sbjct: 185 LEEM----------------KASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGC 228
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
PD YS ++ FC+ ++ EA+K +EMR + DVV YNT+I G C++G++A A+
Sbjct: 229 TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQV 288
Query: 339 FFREMGLSG-VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+M SG V VT+ ++NG C++ + A + + MC+ G P+ T +I L
Sbjct: 289 ILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGL 348
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C R+ EA +L+ + + G P +Y LI GLC+ K++EA +V EM G P+
Sbjct: 349 CKCGRLEEAEYLLQG-MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPN 407
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEM 484
L Y+ ++G G ++ A L + M
Sbjct: 408 LVTYNTMVNGLCVSGRIKEAQQLVQRM 434
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 144/317 (45%), Gaps = 19/317 (5%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV-----------FGLDSDA-----T 230
L S G V T ALI +R K + ++ E+ + + DA
Sbjct: 48 LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 107
Query: 231 AGIGKDV-KRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
G +DV K+++ PNV TFN+L+ GF + G + + M G P+ +YS
Sbjct: 108 VGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSA 167
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ C+ ++ EA+++ EEM+ V D Y+ +I G C+ ++ AE+ R M SG
Sbjct: 168 LIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 227
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
V + +++ +C++G + A +M ++ P+ T +I LC ++ EA
Sbjct: 228 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ 287
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
IL + P +Y +I GLC+ + EA K+ M G P + Y+ IDG
Sbjct: 288 VILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDG 347
Query: 468 YMKEGNVEMATMLRKEM 484
K G +E A L + M
Sbjct: 348 LCKCGRLEEAEYLLQGM 364
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 125/278 (44%), Gaps = 39/278 (14%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T ++ G + D + +GC+P+ +Y+ L+A F +++ EA KL
Sbjct: 23 PDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVVTYTALIAAFARAKKLEEAMKL 79
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EEMR++ ++V YN ++ C++ + A++ ++M G + +TF LV+G+C+
Sbjct: 80 LEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCK 139
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+VD A + M KG P T LI LC ++ EA ++L+ + G+ P
Sbjct: 140 RGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE-EMKASGVTPDAF 198
Query: 425 SYMFLIKGLCE-----------------------------------EGKMEEALKVQAEM 449
+Y LI GLC+ GK+ EA K EM
Sbjct: 199 TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM 258
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ P + Y+ IDG K G + A ++ +M E+
Sbjct: 259 RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQES 296
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 2/213 (0%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEERR 297
R R P+V T+N ++ G + G + + + +M G PD +YS ++ C+
Sbjct: 259 RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDM 318
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ EA+KL + M DVV Y TII G C+ G + AE + M +G + VT+
Sbjct: 319 LVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTT 378
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL-KARVVK 416
L++G C+A VD A V +M G P T ++ LC R+ EA ++ + + +
Sbjct: 379 LISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGR 438
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
P +Y ++ L ++EA ++ +M
Sbjct: 439 AECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 39/259 (15%)
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G ++ EM G PD ++++ ++ + A + +R + +VV Y
Sbjct: 4 GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTY 60
Query: 321 NTIIGGF-----------------------------------CEIGEMARAEEFFREMGL 345
+I F C++ + A++ ++M
Sbjct: 61 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G + +TF LV+G+C+ G+VD A + M KG P T LI LC ++ E
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
A ++L+ + G+ P +Y LI GLC+ K+EEA ++ M G G P + +YS+ I
Sbjct: 181 AKEVLE-EMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239
Query: 466 DGYMKEGNVEMATMLRKEM 484
+ K G + A +EM
Sbjct: 240 HAFCKSGKLLEAQKTLQEM 258
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 4/178 (2%)
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C + A +L EEM+ D + II G++ A + R M G + +
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ L+ + RA ++ A+ + +M +G P T VL+ LC V A D++K
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK- 116
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
++++ G P ++ L+ G C+ G +++A K+ MV KG P++ YSA IDG K
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 174
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C AGD+ +A+ + +M GF P+ T +I + + + A+D L++ G P
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRS----MGCDPN 56
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI K+EEA+K+ EM +G P+L Y+ +D K V A + K
Sbjct: 57 VVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK 116
Query: 483 EMFE 486
+M E
Sbjct: 117 KMIE 120
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 195/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L ++I A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM D + + V
Sbjct: 184 LGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGHLETAFEYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM+ G +PD +Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + + +M R G+ P
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYAP 414
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ E+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM------------- 302
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ ++P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 303 ---SMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSVVT 418
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 196/438 (44%), Gaps = 42/438 (9%)
Query: 59 NHLLSLCRSGLTPTQFSQIALGLK---NNPHLALRFFSFTQHKSLCKHSLSSYATIIHIL 115
+H L+ C L+ IA + ++P L L+FF F++ H+ ++Y ++ L
Sbjct: 60 SHSLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNL 119
Query: 116 SRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIE 175
+ L A+ ++ +RS P + E+LV +Y G
Sbjct: 120 CKVGLNDSAK-IVFDCMRSDGILPDSSILELLVSSYARMG-------------------- 158
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K+++ + + + G+ V N L+ + + V ++RE
Sbjct: 159 KLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLE----------- 207
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
P+V++FN L+ G R G +K + + M GC PD SY+ L+ FC
Sbjct: 208 -----PYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRV 262
Query: 296 RRMREAEKLW-EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ + L E+M K V DV+ Y +II G+C++G+M A E F EM SG++ + T
Sbjct: 263 NEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFT 322
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
F L++G+ + G++ SA+++Y M G P+ T LI C + V + L + +
Sbjct: 323 FNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMK 382
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
V+ L P +Y LI LC+E ++ EA + P IY+ IDG+ K G V
Sbjct: 383 VR-NLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKV 441
Query: 475 EMATMLRKEMFENQVRQE 492
+ A + EM E + R +
Sbjct: 442 DEANFIVAEMQEKKCRPD 459
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 80/175 (45%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TF +L+ G+ REG + +W EM P+ Y+Y+VL+ C+E R+REA
Sbjct: 353 PDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNF 412
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ V YN +I GFC+ G++ A EM +TF L+ G C
Sbjct: 413 LRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCM 472
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
G + AI + M P+ TI LI L EA I +A + K L
Sbjct: 473 KGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNL 527
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 196/438 (44%), Gaps = 42/438 (9%)
Query: 59 NHLLSLCRSGLTPTQFSQIALGLK---NNPHLALRFFSFTQHKSLCKHSLSSYATIIHIL 115
+H L+ C L+ IA + ++P L L+FF F++ H+ ++Y ++ L
Sbjct: 60 SHSLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNL 119
Query: 116 SRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIE 175
+ L A+ ++ +RS P + E+LV +Y G
Sbjct: 120 CKVGLNDSAK-IVFDCMRSDGILPDSSILELLVSSYARMG-------------------- 158
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K+++ + + + G+ V N L+ + + V ++RE
Sbjct: 159 KLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLE----------- 207
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
P+V++FN L+ G R G +K + + M GC PD SY+ L+ FC
Sbjct: 208 -----PYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRV 262
Query: 296 RRMREAEKLW-EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ + L E+M K V DV+ Y +II G+C++G+M A E F EM SG++ + T
Sbjct: 263 NEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFT 322
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
F L++G+ + G++ SA+++Y M G P+ T LI C + V + L + +
Sbjct: 323 FNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMK 382
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
V+ L P +Y LI LC+E ++ EA + P IY+ IDG+ K G V
Sbjct: 383 VR-NLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKV 441
Query: 475 EMATMLRKEMFENQVRQE 492
+ A + EM E + R +
Sbjct: 442 DEANFIVAEMQEKKCRPD 459
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 80/175 (45%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TF +L+ G+ REG + +W EM P+ Y+Y+VL+ C+E R+REA
Sbjct: 353 PDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNF 412
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ V YN +I GFC+ G++ A EM +TF L+ G C
Sbjct: 413 LRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCM 472
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
G + AI + M P+ TI LI L EA I +A + K L
Sbjct: 473 KGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNL 527
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 133/247 (53%), Gaps = 1/247 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ + P++ ++N ++ G +E EK D+ VEM CEP+ ++Y +LM C+E R+ E
Sbjct: 4 INILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEE 63
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +L EM+ K +E DVV Y+T+I GFC G + R + F EM G+ + V + L+N
Sbjct: 64 AMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLIN 123
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G+C+ G A V + M +G +P+ T +IG LC R +ALD+ K G
Sbjct: 124 GFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK-GEE 182
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P+ +Y LI GLC+EG + +A K+ M+ KG + Y+ I G G ++ A L
Sbjct: 183 PSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKL 242
Query: 481 RKEMFEN 487
+ E+
Sbjct: 243 FSSLLED 249
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 141/267 (52%), Gaps = 5/267 (1%)
Query: 224 GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
GL +ATA + +R ++P+V+T+ ++ G ++G K D++ M G EP
Sbjct: 129 GLWREATAVLHTMTER--GIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+Y+VL+ C+E + +A K++E M +K +VV+YNT+I G C G++ A + F +
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246
Query: 344 GLSG--VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
G VE +TF ++ G C+ G +D A+ +Y+ M +G T +LIGE
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSG 306
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ +A+++ K RV K GL P+ +Y +I G C+ + A + + M G P+L Y
Sbjct: 307 IIDKAMELWK-RVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDY 365
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQ 488
+ + KE ++E A L +EM E+
Sbjct: 366 NTLMASLCKESSLEQARRLFQEMKESN 392
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M R+ PD SY+ ++ C+E+R+ +A L EM + E + Y ++ G C+ G
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A EM G+E V + L++G+C G +D ++++M KG P
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI C K EA +L + + G+ P +Y +I GLC++G+ +AL + M K
Sbjct: 121 LINGFCKKGLWREATAVLHT-MTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK 179
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
G EPS Y+ I+G KEG + A + + M E R E
Sbjct: 180 GEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLE 219
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 108/220 (49%), Gaps = 1/220 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ T + L+ + + G +K ++W + +LG P +YSV++ FC+ + A+ L+
Sbjct: 291 NLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLF 350
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M+ + + YNT++ C+ + +A F+EM S E +++F +++G +A
Sbjct: 351 SRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKA 410
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
GD+ SA + NDM + G P+ T I L ++ EA + + G+ P
Sbjct: 411 GDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIAS-GITPDNHV 469
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
Y LIKG ++EE + + +M G LEI ++ +
Sbjct: 470 YDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSIL 509
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 124/275 (45%), Gaps = 21/275 (7%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKV 196
D +KLF L++ F+ +I+ C E +++ V+I ++ RG +
Sbjct: 237 DEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKE----GRLDKAVEIYDTMIERGSFGNL 292
Query: 197 STCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVG 256
TC+ LI E + + E+++ V L + P+ T++ ++ G
Sbjct: 293 FTCHILIGEYIKSGIIDKAMELWKRVHKLG----------------LVPSSTTYSVMIDG 336
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
F + + ++ M G P + Y+ LMA C+E + +A +L++EM++ N E D
Sbjct: 337 FCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPD 396
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
+++N +I G + G++ A+E +M G+ + T+ +N + G ++ A ++
Sbjct: 397 TISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFD 456
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
M G P+ + LI + E +++L+
Sbjct: 457 SMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLR 491
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 183/377 (48%), Gaps = 22/377 (5%)
Query: 111 IIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY-RECGSAPFVFDLLIKCCL 169
++H+ R+R + A+ +I +R ++++ E LV + CG+ VFDLLI+ +
Sbjct: 1 MVHVFVRSRRLSDAQALILRMIRRS-GVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYV 59
Query: 170 EVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDA 229
+ + K+ + R+L S+G V ++ CN+L+ + + V +E++REV
Sbjct: 60 QAR---KLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREV------V 110
Query: 230 TAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
+GI NV+T N ++ ++G F+ V+ EM G D +Y+ L+
Sbjct: 111 RSGI----------ELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLI 160
Query: 290 AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
+C E + EA ++ M DK ++ + YN II G C+ G ARA+ EM G+
Sbjct: 161 GAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLS 220
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
+ T+ L+ CR + A ++ +M R+G P+ + LI R + +AL
Sbjct: 221 PDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVY 280
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
+ + KFGL P Y L+ G C G M EALK++ EM+ +G + Y+ ++G
Sbjct: 281 FRD-MKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLC 339
Query: 470 KEGNVEMATMLRKEMFE 486
KE + A L EM E
Sbjct: 340 KEKMLTDADKLFDEMVE 356
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 132/282 (46%), Gaps = 34/282 (12%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V +N ++ G +E + ++ EM G PD Y+++ L+ C++ M +A L+
Sbjct: 327 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 386
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M +N++ D+VAYNT+I GFC++GEM +A E + M + + +T+ L+N YC
Sbjct: 387 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 446
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVV------- 415
G V A +++ M KG +P T +I C D + E L + A+ V
Sbjct: 447 GHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISY 506
Query: 416 ------------------------KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
K GL P +Y ++ G C +G+M+EA V +M+
Sbjct: 507 NTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIE 566
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
KG P Y+A I+G++ + N+ A EM + +D
Sbjct: 567 KGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDD 608
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 118/215 (54%), Gaps = 1/215 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P++ +N L+ GF + G EK ++W M P+ +Y +L+ +C + EA
Sbjct: 394 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 453
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+LW+ M +K ++ +V NT+I G+C G+ ++A+EF M GV +++ L+NG+
Sbjct: 454 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGF 513
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
R ++D A L N M ++G P+ T V++ C + R+ EA +L+ ++++ G+ P
Sbjct: 514 VREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLR-KMIEKGINPD 572
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+Y LI G + + EA + EM+ +GF P
Sbjct: 573 RSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 146/318 (45%), Gaps = 22/318 (6%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE------------------VFGLDS- 227
+++ GLS +T N L+ E R EI+ E VF +
Sbjct: 214 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRH 273
Query: 228 -DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
D +D+K+ V NV + LM G+ R G + + EM GC D +Y+
Sbjct: 274 LDQALVYFRDMKKFGLVPDNV-IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 332
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ C+E+ + +A+KL++EM ++ D + T+I G C+ G M +A F M
Sbjct: 333 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 392
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
++ V + L++G+C+ G+++ A +++ M + P T +LI C V EA
Sbjct: 393 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 452
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ + K G+ PT + +IKG C G +A + M+ KG P Y+ I+
Sbjct: 453 FRLWDVMIEK-GIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 511
Query: 467 GYMKEGNVEMATMLRKEM 484
G+++E N++ A + +M
Sbjct: 512 GFVREDNMDKAFLWINKM 529
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 7/242 (2%)
Query: 252 ALMVGFYREGAFEKVEDVWVEMARL--GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
AL++ R +VE V ++ + C + + +L+ + + R++RE + + +R
Sbjct: 16 ALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILR 75
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + A N+++GG +I + A E RE+ SG+E + T +VN C+ G D
Sbjct: 76 SKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFD 135
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
++M G + T LIG C + + EA +I+ + K GL P+ +Y +
Sbjct: 136 DVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADK-GLKPSLFTYNAI 194
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I GLC++G+ A + EM+ G P Y+ + + N A KE+F +
Sbjct: 195 INGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEA----KEIFGEML 250
Query: 490 RQ 491
RQ
Sbjct: 251 RQ 252
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N +M GF R+G ++ E V +M G PD +Y+ L+ + + EA +
Sbjct: 536 PDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRF 595
Query: 305 WEEMRDKNVEHDVV 318
+EM + D V
Sbjct: 596 HDEMLQRGFAPDDV 609
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 192/405 (47%), Gaps = 23/405 (5%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+H+L SY T+IH L ++ A+ +I+V + +F +++T S +VF
Sbjct: 10 RHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
LI LE + C + R L V TC ++ + + K + Y +
Sbjct: 70 SGLITAYLESGFLRDAIECYTLTR---EHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYED 126
Query: 222 VFGLD----------------SDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGA 262
+ D + + V + +RP+V ++N LM G+ R G
Sbjct: 127 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 186
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
++ + M G +PD Y+YSVL+ C+E +M +A +L++EM K + + V + T
Sbjct: 187 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 246
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M KG
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 306
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+P+ T LI C + + A + K R+++ + + +Y LI GLC+EG+ +A
Sbjct: 307 LKPDKFTYTTLIDGCCKEGDLDTAFEHRK-RMIQENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
K+ EM+ G +P + Y+ I+ + K+G+V + L KEM N
Sbjct: 366 EKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRN 410
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 81/152 (53%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ D+ EM+ G +PD ++Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 332 EHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ GDV + +M R G P T VL+
Sbjct: 392 CKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLM 423
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 36/173 (20%)
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+N ++ FC+ G++ A+ F + G+ S V++ L+NGY R GD+D
Sbjct: 139 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD---------- 188
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+GF LK+ ++ G+ P +Y LI GLC+E KM
Sbjct: 189 -EGFR-------------------------LKSAMLASGVQPDVYTYSVLINGLCKESKM 222
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
++A ++ EM+ KG P+ ++ IDG+ K G V++A + K+M + +
Sbjct: 223 DDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 95/190 (50%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + +++ +D + G+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 308 --------KPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL----DDVAYTALISG 355
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM ++ D+ Y II FC+ G++ + + +EM +G S
Sbjct: 356 LCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPS 415
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 416 VVTYNVLMNG 425
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 195/412 (47%), Gaps = 29/412 (7%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+H+L SY T+IH L +++ A+ +I+V + +F +++T S +VF
Sbjct: 2 RHTLYSYCTMIHFLCTHQMLPEAKSLIQVVVSRKGKGSASAVFAAILETKGTLRSDIYVF 61
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
LI LE + C + R V TC ++ + + K + Y+E
Sbjct: 62 SGLITAYLESGFLRDAIECYRLTR---EHKFWVPFDTCKKVLEHLMKLKYFKLVWGFYKE 118
Query: 222 VFGLDSDATAGIGKDVK---------RVVR----------VRPNVHTFNALMVGFYREGA 262
+ A+ + RV R +RP+V +FN LM G+ R G
Sbjct: 119 ILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGD 178
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
++ + M G EPD Y+YSVL+ C+E ++ A +L++EM DK + + V + T
Sbjct: 179 LDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTT 238
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G C+ G + A E +++M + + +T+ L+ G C+ GD+ A + ++M KG
Sbjct: 239 LIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKG 298
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+P+ T LI C + + A + K R+++ + + Y LI GLC+EG+ +A
Sbjct: 299 LKPDKITYTTLIDGCCKEGDLETAFEHRK-RMIQENIRLDDVVYTTLISGLCQEGRSVDA 357
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
K+ EM+ G +P Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 358 EKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 403
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 74/137 (54%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N L+ G ++G ++ +++ EM G +PD +Y+ L+ C+E + A + + M
Sbjct: 270 TYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRM 329
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+N+ D V Y T+I G C+ G AE+ REM G++ + T+ ++N +C+ GDV
Sbjct: 330 IQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDV 389
Query: 369 DSAILVYNDMCRKGFEP 385
+ + +M R G P
Sbjct: 390 WTGSKLLKEMQRDGHVP 406
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + + E+
Sbjct: 248 RVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEM------------- 294
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R+ ++P+ T+ L+ G +EG E + M + D Y+ L++ C+E
Sbjct: 295 ---RMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQE 351
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ D Y II FC+ G++ + +EM G S VT
Sbjct: 352 GRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 410
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 196/415 (47%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM D + + V
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 75/137 (54%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N L+ G ++G ++ +D+ EM+ G +PD +Y+ L+ C+E + A + + M
Sbjct: 278 TYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRM 337
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +C+ GDV
Sbjct: 338 IKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDV 397
Query: 369 DSAILVYNDMCRKGFEP 385
+ + +M R G+ P
Sbjct: 398 WTGSKLLKEMQRDGYMP 414
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ +D + G+
Sbjct: 256 RVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 196/415 (47%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY ++IH L ++I A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCSMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAEILETKGTQTSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM D + + V
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + AL+ K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETALEYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM+ G +PD +Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAL 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + + +M R G+ P
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYVP 414
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++ ++I + ++S+ LS + T N LI+ + + + ++ +D + G+
Sbjct: 256 RVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 195/412 (47%), Gaps = 29/412 (7%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+H+L SY T+IH L +++ A+ +I+V + +F +++T S FVF
Sbjct: 12 RHTLHSYCTMIHFLCTHQMLSEAKXLIQVVVSRKGKGSASAVFAAILETKGTQRSDIFVF 71
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
LI LE E + ++ R+ V TC ++ + + K + Y+
Sbjct: 72 SGLITAYLES---EFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKX 128
Query: 222 VFGLD----------------SDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGA 262
+ D + + V + +RP+V ++N LM G+ R G
Sbjct: 129 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 188
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
++ + M G +PD Y+YSVL+ C+E +M +A +L++EM K + + V + T
Sbjct: 189 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 248
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G C+ G + A E ++ M + +T+ L+ G C+ GD+ A + ++M KG
Sbjct: 249 LIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG 308
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+P+ T LI C + + A + K R+++ + + +Y LI GLC+EG+ +A
Sbjct: 309 LKPDKITYTTLIDGCCKEGDLDTAFEHRK-RMIQENIXLDDVAYTALISGLCQEGRSVDA 367
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
K+ EM+ G +P+ Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 368 EKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEM------QRDG 413
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++ + EM+ G +PD +Y+ L+ C+E + A +
Sbjct: 276 PDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEH 335
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C+ G AE+ REM G++ + T+ ++N +C+
Sbjct: 336 RKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCK 395
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 396 KGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 425
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ L + T N LI+ + + + + + +D + G+
Sbjct: 258 RVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHL------IDEMSMKGL-- 309
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG + + M + D +Y+ L++ C+E
Sbjct: 310 --------KPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQE 361
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R +AEK+ EM ++ + Y II FC+ G++ + + +EM G S VT+
Sbjct: 362 GRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTY 421
Query: 356 EHLVNG 361
L+NG
Sbjct: 422 NVLMNG 427
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 208/465 (44%), Gaps = 43/465 (9%)
Query: 37 QSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQ 96
+S +L V+ LL +S S L R L P S++ LK+ P A+ FF +
Sbjct: 59 RSESLQQDVLDLLGLLQSGSNIRERLEQWRGTLQPAVVSRVLQRLKD-PQTAIVFFVWAG 117
Query: 97 HKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGS 156
+ KHS + + L L + +D +FE ++ + G
Sbjct: 118 DRGF-KHSTFTRNCFLQTL----------------LENGSSDRIPAMFERML----DAGY 156
Query: 157 AP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVIS 214
AP + + L+IK ++ I+K T +D ++ RG +VS L + +
Sbjct: 157 APDSYTYHLVIKSLCQMNQIDKAFTMLDKAKV---RGFKPEVSVYTILTRAFCKTGRLKD 213
Query: 215 GYEIYREVFGLDSDATAGI------GKDVKRVV---------RVRPNVHTFNALMVGFYR 259
EI+R + D+ A I D + +V P+V T+N L+ G +
Sbjct: 214 ALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCK 273
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
+K ++ EM G PD +++ +M C+ + A L M ++N
Sbjct: 274 ASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCT 333
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YNT+I G C+ + RA++ E SG VT+ L +G C+ G +D A + +M
Sbjct: 334 YNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMS 393
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG P T LI LC + +A ++L++ +V G P +Y ++ GLC+EG++
Sbjct: 394 GKGCTPNLVTYNTLIDGLCKASKTEKAYELLES-LVSSGFVPDVVTYTIIVDGLCKEGRL 452
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ALK+ M+ +G PS+ Y+A ++G + G V+ A + KEM
Sbjct: 453 DKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 497
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 163/325 (50%), Gaps = 16/325 (4%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD--SDATAGI 233
+++ + +V ++ RG + V T AL+ + R V + I++E+ D +DA A +
Sbjct: 451 RLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYV 510
Query: 234 G-----------KDVKRVV---RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
K+ ++VV R P + +NALM G+ +EG +++ +V+ +MA GC
Sbjct: 511 SLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCV 570
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P+ +Y+++M C+ ++ EA E M DVV+YN II G + + A +
Sbjct: 571 PNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQV 630
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+M +G+ +VT+ L+ +C+ D A+ + +M + G +P+ T LI L
Sbjct: 631 LDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQ 690
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
R+ +A +++ + + +Y +I LC+EG +++AL + M G G E +
Sbjct: 691 TNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTV 750
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ FID KEG ++ A+ L EM
Sbjct: 751 TYNIFIDRLCKEGRLDEASSLLSEM 775
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 122/235 (51%), Gaps = 1/235 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ TFN++M G + G FE+ + MA C P C +Y+ L++ C+++ + A+
Sbjct: 292 VTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAK 351
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +E DVV Y+ + G C+ G + A E +EM G + VT+ L++G
Sbjct: 352 DLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGL 411
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A + A + + GF P+ T +++ LC + R+ +AL +++ ++K G P+
Sbjct: 412 CKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEG-MLKRGCTPS 470
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y L++GLC G+++EA + EMV K Y + ++GY K + A
Sbjct: 471 VITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA 525
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 4/233 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T++ L G + G ++ ++ EM+ GC P+ +Y+ L+ C+ + +A +L
Sbjct: 364 PDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYEL 423
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E + DVV Y I+ G C+ G + +A + M G S +T+ L+ G CR
Sbjct: 424 LESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCR 483
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G VD A ++ +M K + L+ C R EA ++ P
Sbjct: 484 TGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDG----IRGTPYID 539
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
Y L+ G C+EG+++E V +M +G P+++ Y+ +DG K G V+ A
Sbjct: 540 VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEA 592
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 149/335 (44%), Gaps = 23/335 (6%)
Query: 152 RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
R C + ++ LI + +N+++ + D+V +S G V T + L + +
Sbjct: 325 RNCRPSCCTYNTLISGLCKQQNVDRAK---DLVDEFVSSGFVPDVVTYSILADGLCKRGR 381
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
+ +E+ +E+ +G G PN+ T+N L+ G + EK ++
Sbjct: 382 IDEAFELVKEM--------SGKG--------CTPNLVTYNTLIDGLCKASKTEKAYELLE 425
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
+ G PD +Y++++ C+E R+ +A K+ E M + V+ Y ++ G C G
Sbjct: 426 SLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTG 485
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A F+EM + ++ + LVNGYC++ A V + + +G P
Sbjct: 486 RVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RG-TPYIDVYN 542
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
L+ C + R+ E ++ + + G P K+Y ++ GLC+ GK++EA M
Sbjct: 543 ALMDGYCKEGRLDEIPNVFEDMACR-GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHS 601
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
G P + Y+ IDG K + A + +M +
Sbjct: 602 AGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQ 636
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 125/273 (45%), Gaps = 33/273 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V ++N ++ G ++ ++ V +M + G PD +Y+ LMA FC+E R +A +
Sbjct: 606 PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGI 665
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG-VESSSVTFEHLVNGYC 363
+ M V+ D V YNT+I G + + A E EM +G V S+ T+ +++ C
Sbjct: 666 LKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLC 725
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA------LDILKARV--- 414
+ G + A+L+ + M G E T + I LC + R+ EA +D L+ V
Sbjct: 726 KEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYT 785
Query: 415 -VKFGLFPTEK--------SYMFLIKGLC--------------EEGKMEEALKVQAEMVG 451
V GL E+ M +KGLC + +++EAL + MV
Sbjct: 786 TVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQ 845
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+G PS+ Y+ I K V+ A L EM
Sbjct: 846 RGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 878
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 133/282 (47%), Gaps = 20/282 (7%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
E+ + V I++ ++ G+ T N LI +S+ + YE+ E+
Sbjct: 657 ERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML----------- 705
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
R V T+N ++ +EG ++ + M G E + +Y++ + C+
Sbjct: 706 ----RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCK 761
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-GLSGVESSSV 353
E R+ EA L EM + D V+Y T+I G C+ ++ RA + REM + G+ +S
Sbjct: 762 EGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH 818
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
TF L++ + + +D A+ + M ++G P T ++I LC +V +A ++
Sbjct: 819 TFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 878
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
V+ G+ + SY LI GLC +G+ +EAL+V EM E
Sbjct: 879 AVR-GIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCE 919
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 101/242 (41%), Gaps = 40/242 (16%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T N + G+ +++ ++ M G PD Y+Y +++ C+ ++ +A + ++
Sbjct: 127 TRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKA 186
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + + +V Y + FC+ G + A E FR + ++ + +++G+CR D
Sbjct: 187 KVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDC 242
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D A+ +M + P+ VF +Y
Sbjct: 243 DGALEFLKEMNERKVAPD----------------VF--------------------TYNI 266
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI GLC+ K ++A ++ EMV +G P +++ +DG K G E A L M E
Sbjct: 267 LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 326
Query: 489 VR 490
R
Sbjct: 327 CR 328
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
HTFN L+ F + ++ + M + GC P +Y++++ C+ ++ +A +L++E
Sbjct: 818 HTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDE 877
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
M + + V+Y +I G C G A + EM S E + +E +
Sbjct: 878 MAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDVA 929
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 194/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M +A L++EM DK + + V
Sbjct: 184 LGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLXPDKITYTTLIDGNCKEGDLETAFEYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 77/143 (53%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM G PD +Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + + +M R G+ P
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYMP 414
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ E+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI------------ 303
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ + P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 304 ----MKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM + ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 197/415 (47%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I+V + D +F +++T S
Sbjct: 7 STFRHTLHSYCTMIHFLCTHQMLPEAKSLIQVIVSRKGKDSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+VF LI LE + C + R V TC ++ + + K +
Sbjct: 67 YVFSGLITAYLESGFLRDALECFRLSR---EHKFWVPFDTCRKVLDHLMKLKYFKLVWGF 123
Query: 219 YREVFGLDSDAT-------------------AGIGKDVKRVVRVRPNVHTFNALMVGFYR 259
Y+E+ A+ A + D ++P+V +FN LM G+ +
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M EA +L++EM +K + + V
Sbjct: 184 MGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G++ A E ++++ G+ +T+ L+ G+C+ GD+ + ++M
Sbjct: 244 FTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K ++++ + + Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFEYRK-KMIEENIRLDDVVYTALISGLCKEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P Y+ ++ + K G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEM------QRDG 411
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K++ ++I + ++S+GLS + T N LI+ + + ++ +D + G+
Sbjct: 256 KLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + +M D Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ D Y ++ FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSVVT 418
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 195/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G + + M G +PD Y+YSVL+ C+E ++ +A +L++EM D + + V+
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVS 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + N+M
Sbjct: 244 FTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFEYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEM------QRDG 411
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ E+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEM------------- 302
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ ++P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 303 ---SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 193/405 (47%), Gaps = 23/405 (5%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + D +F +++T S
Sbjct: 7 STFRHTLHSYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+VF LI LE I ++ R+ V TC ++ + + K +
Sbjct: 67 YVFSGLITAYLESGFIRD---AIEFFRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 219 YREVFGLDSDAT----------------AGIGKDVKRVVR---VRPNVHTFNALMVGFYR 259
Y+E+ A+ + + V + +RP+V +FN LM G+ R
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIR 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M EA +L+ EM D + + V
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E ++++ G +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
K +P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKELKPDKITYTTLIDGSCKEGDLETAFEYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+A K+ M+ G +P Y+ I+ + K+G+V+ + L KEM
Sbjct: 363 VDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEM 407
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 75/141 (53%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++ D+ EM+ +PD +Y+ L+ C+E + A +
Sbjct: 274 PDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEY 333
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C+ G AE+ R M G++ + T+ ++N +C+
Sbjct: 334 RKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCK 393
Query: 365 AGDVDSAILVYNDMCRKGFEP 385
GDV + + +M R G P
Sbjct: 394 KGDVKTGSKLLKEMXRDGHVP 414
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 77/172 (44%), Gaps = 16/172 (9%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + L+S+G S + T N LI+ + + + ++ E+
Sbjct: 256 RVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEM------------- 302
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ ++P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 303 ---SMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
R +AEK+ M ++ D Y II FC+ G++ + +EM G
Sbjct: 360 GRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDG 411
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 192/409 (46%), Gaps = 23/409 (5%)
Query: 98 KSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSA 157
S +H+L SY T IH L ++ A+ +I+V + +F +++T S
Sbjct: 1 NSTFRHTLHSYCTTIHFLCTHQMFSEAKSLIQVVVSRKGKGSAXAVFAAILETKGTQRSD 60
Query: 158 PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
+VF LI LE + C + R L V TC ++ + + + +
Sbjct: 61 IYVFSGLITAYLESGFLRDAIECYRLTR---EHKLWVPFDTCRKVLEHLMKLRYFKLVWG 117
Query: 218 IYREV------------------FGLDSDA-TAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
Y E+ F D D A + D +RP+V ++N LM G+
Sbjct: 118 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYI 177
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
R G ++ + M G +PD Y+YSVL+ C+E M +A +L++EM K + + V
Sbjct: 178 RLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXV 237
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+ T+I G C+ G + A E +++M + +T+ LV G C+ GD++ A + ++M
Sbjct: 238 TFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEM 297
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
KG +P+ T LI C + + A + K R+++ + + +Y LI GLC+EG+
Sbjct: 298 XXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRK-RMIQENIRLDDVAYTALISGLCQEGR 356
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+A K+ EM+ G +P Y+ I+ + K+G+V + L KEM N
Sbjct: 357 SXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRN 405
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G + + EM G +PD ++Y+ L+ C+E + A +
Sbjct: 269 PDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEH 328
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C+ G AE+ REM G++ + T+ ++N +C+
Sbjct: 329 RKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCK 388
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 389 KGDVWKGSKLLKEMQRNGHVPXVVTYNVLM 418
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 26/191 (13%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGL-DSDATAGIG 234
+++ ++I + ++S+ L + T N L++ + + KG ++ + GL D G+
Sbjct: 251 RVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCK-KGDLN------QAHGLIDEMXXKGL- 302
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
+P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 303 ---------KPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRL----DDVAYTALIS 349
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C+E R +AEK+ EM ++ D Y II FC+ G++ + + +EM +G
Sbjct: 350 GLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVP 409
Query: 351 SSVTFEHLVNG 361
VT+ L+NG
Sbjct: 410 XVVTYNVLMNG 420
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 128/501 (25%), Positives = 222/501 (44%), Gaps = 58/501 (11%)
Query: 27 STSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCR--SGLTPTQFSQIALGLKN- 83
+ SSS D +AT++S R W +S S L+P S + +
Sbjct: 40 ACSSSAADPDAVAAEVATLLS-----RCSGDWRLAVSSSDLPSRLSPAAISSLVRRRPSP 94
Query: 84 -----NPHLALRFFSFTQHK-SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN 137
+P L L FF ++ + + + ++A + L L A ++ +R+ +
Sbjct: 95 SSPRLHPKLLLDFFYWSSPQLAPSAPAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPS 154
Query: 138 DPKLKLFEVLVKTYRECGSA----PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLS 193
P VL +R + P V D+L+ K +++ ++V M+ RG++
Sbjct: 155 PPV-----VLASIHRALSDSGHRSPAVLDVLVD---TYKKSGRVQDAAEVVLMMRDRGMA 206
Query: 194 VKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV---------------- 237
+ CNAL+ ++ R + +++ + G AGI DV
Sbjct: 207 PSIRCCNALLKDLLRADAMALLWKVREFMVG------AGISPDVYTYSTLIEAYCKVREF 260
Query: 238 ----KRVVRVRP-----NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
K +V +R N T+N L+ G R GA E+ +M G PD ++Y L
Sbjct: 261 DTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGAL 320
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ C+ RR EA+ L +EM ++ +VV Y +I GF G A + +EM +GV
Sbjct: 321 INGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGV 380
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+ + +T+++LV G C+ G +D A L+ M R P+ T ++I +A
Sbjct: 381 QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFR 440
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+L + + G+ P +Y +I GLC+ G+ E+A + EM KG +P+ +Y+ I GY
Sbjct: 441 LL-SEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 499
Query: 469 MKEGNVEMATMLRKEMFENQV 489
+EGNV +A + +M + V
Sbjct: 500 CREGNVSLACEIFDKMTKVNV 520
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 124/251 (49%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+PN T++ L+ G + G ++ + +M R PD +Y++++ ++A
Sbjct: 380 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAF 439
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM + + +V Y+ +I G C+ GE +A + EM G++ ++ + L++GY
Sbjct: 440 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 499
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G+V A +++ M + P+ LI L RV E+ A++ + GL P
Sbjct: 500 CREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF-AQMQERGLLPN 558
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E +Y LI G + G +E A ++ M+ G +P+ IY ++ Y K ++E + K
Sbjct: 559 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 618
Query: 483 EMFENQVRQED 493
M + V ++
Sbjct: 619 SMLDQGVMLDN 629
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 41/287 (14%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV+T++ ++ G + G EK D+ EM G +P+ + Y+ L++ +C E + A
Sbjct: 450 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 509
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++++M NV D+ YN++I G ++G + + ++F +M G+ + T+ L++GY
Sbjct: 510 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 569
Query: 363 CRAGDVDSAILVYNDMCRKGFEP------------------------------EGSTIE- 391
+ GD++SA + M G +P +G ++
Sbjct: 570 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 629
Query: 392 ----VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+LI L + A +L + K G P Y LI GLC+ E+A +
Sbjct: 630 RIYGILIHNLSSSGNMEAAFRVLSG-IEKNGSVPDVHVYSSLISGLCKTADREKAFGILD 688
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMA-----TMLRKEMFENQV 489
EM KG +P++ Y+A IDG K G++ A ++L K + N V
Sbjct: 689 EMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCV 735
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 109/225 (48%), Gaps = 2/225 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ G E V + + G PD + YS L++ C+ +A + +EM
Sbjct: 632 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 691
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K V+ ++V YN +I G C+ G+++ A F + G+ + VT+ L++G C+ GD+
Sbjct: 692 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 751
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+A +YN+M G P+ VL + +A+ +++ ++ + S+ L
Sbjct: 752 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG--HASISSFNNL 809
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ G C+ GKM+E LK+ ++G+G P+ I G + G +
Sbjct: 810 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 854
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 11/246 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T++ L+ G+ + G E E + M G +P+ Y L+ + + + +
Sbjct: 557 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 616
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT-----FEHLV 359
++ M D+ V D Y +I G M E FR LSG+E + + L+
Sbjct: 617 FKSMLDQGVMLDNRIYGILIHNLSSSGNM---EAAFRV--LSGIEKNGSVPDVHVYSSLI 671
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+G C+ D + A + ++M +KG +P LI LC + A ++ + + K GL
Sbjct: 672 SGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK-GL 730
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI G C+ G + A + EM+ G P +YS G G++E A
Sbjct: 731 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 790
Query: 480 LRKEMF 485
L +EMF
Sbjct: 791 LIEEMF 796
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+VH +++L+ G + EK + EM++ G +P+ Y+ L+ C+ + A +
Sbjct: 662 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 721
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + K + + V Y ++I G C++G+++ A + EM +G+ + + L G
Sbjct: 722 FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSS 781
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AGD++ A+ + +M +G S+ L+ C + ++ E L +L ++ GL P
Sbjct: 782 AGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHV-IMGRGLVPNAL 839
Query: 425 SYMFLIKGLCEEGKMEEALKVQAE-------------------MVGKGFEPSLEIYSAFI 465
+ +I GL E GK+ E + E M+ +G P L++ I
Sbjct: 840 TIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMI 898
Query: 466 DGYMKEGNVEMATMLR 481
+ KEGN++ A MLR
Sbjct: 899 RDHCKEGNLDKALMLR 914
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 122/255 (47%), Gaps = 7/255 (2%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V P+++ +N+L+ G + G E+ + +M G P+ ++YS L+ + + +
Sbjct: 518 VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLES 577
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
AE+L + M D ++ + V Y ++ + + ++ + F+ M GV + + L++
Sbjct: 578 AEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIH 637
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKF 417
+G++++A V + + + G P+ LI LC D+ + F LD + K
Sbjct: 638 NLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILD----EMSKK 693
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G+ P Y LI GLC+ G + A V ++ KG P+ Y++ IDG K G++ A
Sbjct: 694 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 753
Query: 478 TMLRKEMFENQVRQE 492
L EM + +
Sbjct: 754 FYLYNEMLATGITPD 768
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 2/233 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN + L+ +++ EKV + M G D Y +L+ M A
Sbjct: 590 LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAF 649
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ + DV Y+++I G C+ + +A EM GV+ + V + L++G
Sbjct: 650 RVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 709
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++GD+ A V+N + KG P T LI C + A L ++ G+ P
Sbjct: 710 CKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF-YLYNEMLATGITPD 768
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
Y L G G +E+A+ + EM +G S+ ++ +DG+ K G ++
Sbjct: 769 AFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQ 820
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 120/295 (40%), Gaps = 58/295 (19%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN+ +NAL+ G + G +V+ + G P+C +Y+ L+ C+ + A
Sbjct: 695 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 754
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ EM + D Y+ + G G++ +A EM L G S S +F +LV+G+
Sbjct: 755 YLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGF 813
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL----------KA 412
C+ G + + + + + +G P TIE +I L + ++ E I A
Sbjct: 814 CKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAA 873
Query: 413 R--------VVKFGLFPTE----------------------------------KSYMFLI 430
R ++ G P + SY+ ++
Sbjct: 874 RHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIV 933
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPS-----LEIYSAFIDGYMKEGNVEMATML 480
LC +GK+ EAL + EM +G PS + + + GY++E N + ML
Sbjct: 934 DNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNML 988
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 201/436 (46%), Gaps = 30/436 (6%)
Query: 55 KSRWNHLLSL-CRSGLTPTQFSQIALGLK-NNPHLALRFFSFTQHKSLCKHSLSSYATII 112
K WN LL S LT T +Q+ L L + ++ FF + + KHSL S T+I
Sbjct: 48 KGHWNSLLKPNVGSNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHKHSLQSSWTMI 107
Query: 113 HILSRARLIGPARDVI-RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEV 171
H L++ + A++++ R+A+R + P + +V+ + + S + L+ +
Sbjct: 108 HTLAKHKQFKTAQNLLERIAVRDYLSSP--SVLNAVVRIHDDPDSNSQILSWLV---IFY 162
Query: 172 KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA 231
N + + + + G + C L+ +++ + +++Y
Sbjct: 163 ANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVY------------ 210
Query: 232 GIGKDVKRVVRVR--PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
K++VRV PN+H FN L+ + G EK E + EM PD ++Y+ L+
Sbjct: 211 ------KKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLI 264
Query: 290 AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC-EIGEMARAEEFFREMGLSGV 348
+++C++ EA + + M V D+V YN++I GFC E+ ++ A M + G+
Sbjct: 265 SLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGL 324
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
VT+ ++ C G + A + N+M + EP+ T LI C + A+
Sbjct: 325 HPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMK 384
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+ K ++++ GL P + ++ LI G C+ +++ A + EM+ GF PS YS +D Y
Sbjct: 385 V-KKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSY 443
Query: 469 MKEGNVEMATMLRKEM 484
+ N E L E+
Sbjct: 444 YDQDNKEAVIRLPDEL 459
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 123/259 (47%), Gaps = 8/259 (3%)
Query: 240 VVRVR----PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
VVR+ N + L++ + + V+ M G +P ++ +VL+ +
Sbjct: 141 VVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKA 200
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R K++++M V ++ +N +I C+ G++ +AE+ EM + T+
Sbjct: 201 RLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTY 260
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++ YC+ G A+ + + M R G P+ T LI C R V + + L+ R V
Sbjct: 261 NTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFC--REVNDLEEALRLREV 318
Query: 416 KF--GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
GL P +Y +++ LCEEGK+++A ++ EM + EP + I+ Y K G+
Sbjct: 319 MEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGD 378
Query: 474 VEMATMLRKEMFENQVRQE 492
+ A ++K+M E ++ +
Sbjct: 379 MGSAMKVKKKMLEAGLKPD 397
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 4/224 (1%)
Query: 273 MARLGCEPDCYS--YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
+ R+ +PD S S L+ + R ++A +++E MR + + A ++ +
Sbjct: 141 VVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKA 200
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
+ +++M GV + F L++ C++GDV+ A + N+M + P+ T
Sbjct: 201 RLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTY 260
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE-GKMEEALKVQAEM 449
LI C K +EAL I + R+ + G+ P +Y LI G C E +EEAL+++ M
Sbjct: 261 NTLISLYCKKGMHYEALGI-QDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVM 319
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+G P + Y++ + +EG ++ A L EM E +V ++
Sbjct: 320 EVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDN 363
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ TF AL+ GF + + ++ EM G P +YS L+ + ++
Sbjct: 394 LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVI 453
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L +E+ K + D+ Y +I C+I ++ AE F M G++ SV + L Y
Sbjct: 454 RLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAY 513
Query: 363 CRAGDVDSAILVYNDMCRK 381
+AG +A + ++M ++
Sbjct: 514 FKAGKAIAASDMLDEMDKR 532
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 195/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM D + + V
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM+ G +PD +Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + + +M R G+ P
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYMP 414
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ +D + G+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 632
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 196/413 (47%), Gaps = 24/413 (5%)
Query: 73 QFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVAL 132
Q S+I L ++N AL FF++ ++ + S +Y IIHIL+ +R A + +
Sbjct: 100 QISKILLRCQSNFVSALAFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELI 159
Query: 133 R-SPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRG 191
S + +F+ LV C P +F++LIK ++ ++ I + ++ G
Sbjct: 160 ELSKDVSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVK---LDLIHESYWSFKKMVKLG 216
Query: 192 LSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDA-TAGI-------GKDVKRVV 241
V CN ++ +++ K +E+Y E+ G+ S+A T I DV ++
Sbjct: 217 FVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKIN 276
Query: 242 RV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
P+V T+N L+ + R G E ++ M R G PD SY+ LM
Sbjct: 277 GFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGL 336
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C R+REA +L+ M D+ ++ DVV YNT+IG +C+ G + A EM G+ S
Sbjct: 337 CRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDS 396
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
T LV GY R G + SA+ + ++ + G + LI LC + R F A +L+
Sbjct: 397 FTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLE- 455
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
R+++ P Y LI+ C + EAL ++ EM+ + ++P+ + Y + I
Sbjct: 456 RILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLI 508
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 113/293 (38%), Gaps = 58/293 (19%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++ RG+ V N LI + + + E+ G + + P+
Sbjct: 352 MIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIG----------------IGIHPD 395
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGC---------------------------- 278
T L+ G+ REG ++ VE+ +LG
Sbjct: 396 SFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLE 455
Query: 279 -------EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
+PD Y+ L+ FC + EA L EM ++N + Y ++I CEI
Sbjct: 456 RILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEIN 515
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA--ILVYNDMCRKGFEPEG-S 388
E EM S V LVNGYC+ G+ D A +LV + F+ E +
Sbjct: 516 RSVDGEGLMVEMVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFN 575
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
++ + ++ ++ ++ E L+ R++K G P + ++I G+ + ++ +
Sbjct: 576 SLVKVYRDVGNETKLME----LQDRMLKAGFLPNSLTCRYIIHGIWKSMRLNK 624
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 173/361 (47%), Gaps = 41/361 (11%)
Query: 157 APFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGY 216
+P V D+L+ K +++ ++V M+ RGL+ + CNAL+ ++ R + +
Sbjct: 46 SPAVLDVLVDT---YKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLW 102
Query: 217 EIYREVFGLDSDATAGIGKDV--------------------KRVVRVRP-----NVHTFN 251
++ + G AGI DV K +V +R N T+N
Sbjct: 103 KVREFMVG------AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYN 156
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
L+ G R GA E+ +M G PD ++Y L+ C+ RR EA+ L +EM
Sbjct: 157 VLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCA 216
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
++ +VV Y +I GF G A + +EM +GV+ + +T+++LV G C+ G +D A
Sbjct: 217 ELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRA 276
Query: 372 ILVYNDMCRKGFEPEGSTIEVLI-GEL--CDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
L+ M R P+ T ++I G +K+ F L + + G+ P +Y
Sbjct: 277 SLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLL----SEMENAGISPNVYTYSI 332
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+I GLC+ G+ E+A + EM KG +P+ +Y+ I GY +EGNV +A + +M +
Sbjct: 333 MIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 392
Query: 489 V 489
V
Sbjct: 393 V 393
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 124/251 (49%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+PN T++ L+ G + G ++ + +M R PD +Y++++ ++A
Sbjct: 253 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAF 312
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM + + +V Y+ +I G C+ GE +A + EM G++ ++ + L++GY
Sbjct: 313 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 372
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G+V A +++ M + P+ LI L RV E+ A++ + GL P
Sbjct: 373 CREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF-AQMQERGLLPN 431
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E +Y LI G + G +E A ++ M+ G +P+ IY ++ Y K ++E + K
Sbjct: 432 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 491
Query: 483 EMFENQVRQED 493
M + V ++
Sbjct: 492 SMLDQGVMLDN 502
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 129/270 (47%), Gaps = 36/270 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV+T++ ++ G + G EK D+ EM G +P+ + Y+ L++ +C E + A
Sbjct: 323 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 382
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++++M NV D+ YN++I G ++G + + ++F +M G+ + T+ L++GY
Sbjct: 383 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 442
Query: 363 CRAGDVDSAILVYNDMCRKGFEP------------------------------EGSTIE- 391
+ GD++SA + M G +P +G ++
Sbjct: 443 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 502
Query: 392 ----VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+LI L + A +L + + K G P Y LI GLC+ E+A +
Sbjct: 503 RIYGILIHNLSSSGNMEAAFRVL-SEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILD 561
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
EM KG +P++ Y+A IDG K G++ A
Sbjct: 562 EMSKKGVDPNIVCYNALIDGLCKSGDISYA 591
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 2/225 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ G E V E+ + G PD + YS L++ C+ +A + +EM
Sbjct: 505 YGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 564
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K V+ ++V YN +I G C+ G+++ A F + G+ + VT+ L++G C+ GD+
Sbjct: 565 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 624
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+A +YN+M G P+ VL + +A+ +++ ++ + S+ L
Sbjct: 625 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG--HASISSFNNL 682
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ G C+ GKM+E LK+ ++G+G P+ I G + G +
Sbjct: 683 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 727
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 1/241 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T++ L+ G+ + G E E + M G +P+ Y L+ + + + +
Sbjct: 430 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 489
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ M D+ V D Y +I G M A E+ +G + L++G C+
Sbjct: 490 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCK 549
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D + A + ++M +KG +P LI LC + A ++ + + K GL P
Sbjct: 550 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK-GLVPNCV 608
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C+ G + A + EM+ G P +YS G G++E A L +EM
Sbjct: 609 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 668
Query: 485 F 485
F
Sbjct: 669 F 669
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 123/255 (48%), Gaps = 7/255 (2%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V P+++ +N+L+ G + G E+ + +M G P+ ++YS L+ + + +
Sbjct: 391 VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLES 450
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
AE+L + M D ++ + V Y ++ + + ++ + F+ M GV + + L++
Sbjct: 451 AEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIH 510
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKF 417
+G++++A V +++ + G P+ LI LC D+ + F LD + K
Sbjct: 511 NLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILD----EMSKK 566
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G+ P Y LI GLC+ G + A V ++ KG P+ Y++ IDG K G++ A
Sbjct: 567 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 626
Query: 478 TMLRKEMFENQVRQE 492
L EM + +
Sbjct: 627 FYLYNEMLATGITPD 641
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+VH +++L+ G + EK + EM++ G +P+ Y+ L+ C+ + A +
Sbjct: 535 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 594
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + K + + V Y ++I G C++G+++ A + EM +G+ + + L G
Sbjct: 595 FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSS 654
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AGD++ A+ + +M +G S+ L+ C + ++ E L +L ++ GL P
Sbjct: 655 AGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHV-IMGRGLVPNAL 712
Query: 425 SYMFLIKGLCEEGKMEEALKVQAE-------------------MVGKGFEPSLEIYSAFI 465
+ +I GL E GK+ E + E M+ +G P L++ I
Sbjct: 713 TIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMI 771
Query: 466 DGYMKEGNVEMATMLR 481
+ KEGN++ A MLR
Sbjct: 772 RDHCKEGNLDKALMLR 787
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 2/233 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN + L+ +++ EKV + M G D Y +L+ M A
Sbjct: 463 LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAF 522
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ E+ DV Y+++I G C+ + +A EM GV+ + V + L++G
Sbjct: 523 RVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 582
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++GD+ A V+N + KG P T LI C + A L ++ G+ P
Sbjct: 583 CKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF-YLYNEMLATGITPD 641
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
Y L G G +E+A+ + EM +G S+ ++ +DG+ K G ++
Sbjct: 642 AFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQ 693
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 54/269 (20%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN+ +NAL+ G + G +V+ + G P+C +Y+ L+ C+ + A
Sbjct: 568 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 627
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ EM + D Y+ + G G++ +A EM L G S S +F +LV+G+
Sbjct: 628 YLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGF 686
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL----------KA 412
C+ G + + + + + +G P TIE +I L + ++ E I A
Sbjct: 687 CKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAA 746
Query: 413 R--------VVKFGLFPTE----------------------------------KSYMFLI 430
R ++ G P + SY+ ++
Sbjct: 747 RHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIV 806
Query: 431 KGLCEEGKMEEALKVQAEMVGKG-FEPSL 458
LC +GK+ EAL + EM +G +P+L
Sbjct: 807 DNLCRKGKLSEALNLLKEMDKRGNLQPTL 835
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 195/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM D + + V
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 78/143 (54%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM+ G +PD +Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + + +M R G P
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGCMP 414
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ +D + G+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSVVT 418
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 221/475 (46%), Gaps = 80/475 (16%)
Query: 71 PTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRV 130
P ++ +++ P +ALRFF + + ++ K S +YA I+ IL+R L+ A V+
Sbjct: 47 PQLLVRVLNTVRHRPAVALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVM-- 104
Query: 131 ALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSR 190
E +V E G + L+ K++ +E C+ + ++S+
Sbjct: 105 --------------EKVVSVKMENGVVDVLILDLLLWIYAKKSM--LEKCLLVFYKMVSK 148
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG-----------------LDSDATAG- 232
G+ + CN ++ + R + S ++ REV+ LDS G
Sbjct: 149 GMLPDLKNCNRVL-RLLRDRD--SSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGK 205
Query: 233 IGKDVKRVVRVR-----PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
+ + ++ +++++ PN T+N L+ G G E+ +++ EM RLG E Y+Y
Sbjct: 206 VQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDP 265
Query: 288 LMAVFCEERRMREAEKLWEEMR-----------------------------------DKN 312
L+ +CE+ ++ EA +L EEM +KN
Sbjct: 266 LIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKN 325
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ D+V+YNT+I G+ +G + A F E+ G+ S VT+ L++G CR GD+D A+
Sbjct: 326 LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAM 385
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+ ++M + G +P+ T +L+ C + A ++ ++ GL P +Y+ I G
Sbjct: 386 RLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFD-EMLNRGLQPDRFAYITRIVG 444
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ G +A +Q EM+ +GF P L Y+ FIDG K GN++ A+ L K+M N
Sbjct: 445 ELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYN 499
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 166/395 (42%), Gaps = 50/395 (12%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
+L +Y TI++ L + + AR ++ V + + P L + L+ Y G+ F L
Sbjct: 294 TLVTYNTIMYGLCKWGRVSDARKLLDVMV-NKNLMPDLVSYNTLIYGYTRLGNIGEAFLL 352
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
+ L RGL V T N LI + R + + E+
Sbjct: 353 FAE--------------------LRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMI 392
Query: 224 GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
D P+V TF L+ GF + G ++++ EM G +PD +
Sbjct: 393 KHGPD----------------PDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRF 436
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+Y + + +A + EEM + D++ YN I G ++G + A E ++M
Sbjct: 437 AYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKM 496
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
+G+ VT+ +++ + AG + A V+ +M KG P T VLI + R
Sbjct: 497 LYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGR- 555
Query: 404 FEALDILKARVVKF------GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
LK ++ F G+ P +Y LI GLC+ KM++A K EM KG P+
Sbjct: 556 ------LKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPN 609
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
Y+ I+ G+ + A L K+M + +++ +
Sbjct: 610 KYTYTILINENCNLGHWQEALRLYKDMLDREIQPD 644
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 1/229 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ + +VG + G K + EM G PD +Y+V + + ++EA
Sbjct: 431 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEAS 490
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L ++M + D V Y +II G + +A F EM G+ S VT+ L++ Y
Sbjct: 491 ELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSY 550
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G + AIL + +M KG P T LI LC R++ +A K G+ P
Sbjct: 551 AVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAK-GISPN 609
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ +Y LI C G +EAL++ +M+ + +P +SA + K+
Sbjct: 610 KYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKD 658
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 35/277 (12%)
Query: 138 DPKLKLFEVLVKTYRECGSAPF---VFDLLIKCCLEVKNIEKIETCVDIVRM-------- 186
DP + F +LV+ + + G+ P +FD ++ L+ I V +++
Sbjct: 397 DPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFG 456
Query: 187 ----LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAGIGKDVKRV 240
+++RG + T N I + + + E+ +++ GL D
Sbjct: 457 MQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHV---------- 506
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
T+ +++ G K V++EM G P +Y+VL+ + R++
Sbjct: 507 --------TYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKL 558
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A + EM +K V +V+ YN +I G C++ +M +A +FF EM G+ + T+ L+N
Sbjct: 559 AILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILIN 618
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
C G A+ +Y DM + +P+ T L+ L
Sbjct: 619 ENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHL 655
>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 636
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 196/413 (47%), Gaps = 24/413 (5%)
Query: 73 QFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVAL 132
Q S+I L ++N AL FF++ ++ + S +Y IIHIL+ +R A + +
Sbjct: 104 QISKILLRCQSNFVSALAFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELI 163
Query: 133 R-SPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRG 191
S + +F+ LV C P +F++LIK ++ ++ I + ++ G
Sbjct: 164 ELSKDVSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVK---LDLIHESYWSFKKMVKLG 220
Query: 192 LSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDA-TAGI-------GKDVKRVV 241
V CN ++ +++ K +E+Y E+ G+ S+A T I DV ++
Sbjct: 221 FVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKIN 280
Query: 242 RV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
P+V T+N L+ + R G E ++ M R G PD SY+ LM
Sbjct: 281 GFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGL 340
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C R+REA +L+ M D+ ++ DVV YNT+IG +C+ G + A EM G+ S
Sbjct: 341 CRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDS 400
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
T LV GY R G + SA+ + ++ + G + LI LC + R F A +L+
Sbjct: 401 FTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLE- 459
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
R+++ P Y LI+ C + EAL ++ EM+ + ++P+ + Y + I
Sbjct: 460 RILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLI 512
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 113/293 (38%), Gaps = 58/293 (19%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++ RG+ V N LI + + + E+ G + + P+
Sbjct: 356 MIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIG----------------IGIHPD 399
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGC---------------------------- 278
T L+ G+ REG ++ VE+ +LG
Sbjct: 400 SFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLE 459
Query: 279 -------EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
+PD Y+ L+ FC + EA L EM ++N + Y ++I CEI
Sbjct: 460 RILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEIN 519
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA--ILVYNDMCRKGFEPEG-S 388
E EM S V LVNGYC+ G+ D A +LV + F+ E +
Sbjct: 520 RSVDGEGLMVEMVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAQDFQFFDSESFN 579
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
++ + ++ ++ ++ E L+ R++K G P + ++I G+ + ++ +
Sbjct: 580 SLVKVYRDVGNETKLME----LQDRMLKAGFLPNSLTCRYIIHGIWKSMRLNK 628
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 167/318 (52%), Gaps = 17/318 (5%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
++ D+ + ++G+ V T N+LI + +G SDA+ +
Sbjct: 272 MDDAFDLFNKMETKGIKPDVFTYNSLISCLCN--------------YGRWSDASRLLSDM 317
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
++R ++ PNV TFN+L+ F +EG + E ++ EM + +P+ +Y+ L+ FC
Sbjct: 318 IER--KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 375
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
R+ EA++++ M K+ DVV YNT+I GFC+ + E FREM G+ ++VT+
Sbjct: 376 RLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 435
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L+ G +AGD D A ++ M G P+ T +L+ LC ++ +AL + + + K
Sbjct: 436 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE-YLQK 494
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
+ P +Y +I+G+C+ GK+E+ + + KG +P++ IY+ I G+ ++G E
Sbjct: 495 SKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 554
Query: 477 ATMLRKEMFENQVRQEDG 494
A L +EM E+ + G
Sbjct: 555 ADALFREMKEDGTLPDSG 572
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 160/326 (49%), Gaps = 20/326 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
F ++ LI C + N + ++ ++ R ++ V T N+LI ++ +I ++
Sbjct: 292 FTYNSLISC---LCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKL 348
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+ E+ ++R + PN+ T+N+L+ GF ++ + ++ M C
Sbjct: 349 FDEM--------------IQR--SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 392
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
PD +Y+ L+ FC+ +R+ E +L+ EM + + + V YNT+I G + G+ A++
Sbjct: 393 LPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 452
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F++M GV +T+ L++G C+ G ++ A++V+ + + EP T ++I +C
Sbjct: 453 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMC 512
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+V + D+ + +K G+ P Y +I G C +G EEA + EM G P
Sbjct: 513 KAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 571
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ I +++G+ + L KEM
Sbjct: 572 GCYNTLIRARLRDGDKAASAELIKEM 597
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 123/236 (52%), Gaps = 1/236 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ NV +N ++ G + + D++ +M G +PD ++Y+ L++ C R +A
Sbjct: 251 KIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDA 310
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L +M ++ + +VV +N++I F + G++ AE+ F EM ++ + VT+ L+NG
Sbjct: 311 SRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLING 370
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C +D A ++ M K P+ T LI C +RV E +++ + + + GL
Sbjct: 371 FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFR-EMSQRGLVG 429
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI+GL + G + A K+ +MV G P + YS +DG K G +E A
Sbjct: 430 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 485
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ TFN L+ G + + + M GC+PD ++Y ++ C+ + A
Sbjct: 183 KPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 242
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L ++M +E +VV YNTII G C+ M A + F +M G++ T+ L++ C
Sbjct: 243 LLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLC 302
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G A + +DM + P T LI + ++ EA + L +++ + P
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEA-EKLFDEMIQRSIDPNI 361
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI G C +++EA ++ MV K P + Y+ I G+ K VE L +E
Sbjct: 362 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFRE 421
Query: 484 M 484
M
Sbjct: 422 M 422
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 1/244 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +T++ L+ F R V +M +LG EPD + S L+ +C +R+ EA L
Sbjct: 115 NHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 174
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++M + + D V +NT+I G + + A M G + T+ +VNG C+
Sbjct: 175 DQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 234
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
GD+D A+ + M + E +I LC + + +A D+ K G+ P +
Sbjct: 235 GDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETK-GIKPDVFT 293
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI LC G+ +A ++ ++M+ + P++ +++ ID + KEG + A L EM
Sbjct: 294 YNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 353
Query: 486 ENQV 489
+ +
Sbjct: 354 QRSI 357
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 126/269 (46%), Gaps = 20/269 (7%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
++++ I +++S+ V T N LI + K V G E++RE + G
Sbjct: 375 DRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFRE---MSQRGLVG-- 429
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
N T+N L+ G ++ G + + ++ +M G PD +YS+L+ C+
Sbjct: 430 -----------NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 478
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
++ +A ++E ++ +E ++ YN +I G C+ G++ + F + L GV+ + +
Sbjct: 479 YGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 538
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI-GELCDKRRVFEALDILKAR 413
+ +++G+CR G + A ++ +M G P+ LI L D + A I + R
Sbjct: 539 YTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMR 598
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
F + S + ++ + +G++E++
Sbjct: 599 SCG---FVGDASTISMVINMLHDGRLEKS 624
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 194/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M +A L++EM DK + + V
Sbjct: 184 LGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLXPDKITYTTLIDGNCKEGDLETAFEYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 77/143 (53%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM G PD +Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + + +M R G+ P
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYMP 414
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ E+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI------------ 303
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ + P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 304 ----MKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM + ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 194/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTLRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G + + M G +PD Y+YSVL+ C+E +M +A L++EM DK + + V
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKFTYTTLIDGNCKEGDLETAFEYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 80/143 (55%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM G +PD ++Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + + +M R G++P
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYKP 414
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ E+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI------------ 303
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ ++P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 304 ----MKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G + S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 225/500 (45%), Gaps = 65/500 (13%)
Query: 29 SSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLL--SLCRSGLTPTQFSQIALGLKNNPH 86
S+S P + ++ + ++ R K W + S L P Q+ + ++
Sbjct: 28 SASKPDEENDCRFVSLLCDIV---RGKQSWKVAFNDASISSTLRPHHVEQVLMNTLDDAK 84
Query: 87 LALRFFSFTQ-HKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFE 145
LALRFF+F HK++ HS +SYA ++H L +RL PA ++ L E+ PK +F
Sbjct: 85 LALRFFNFLGLHKNM-NHSTTSYAIMVHALVHSRLFWPANSLLHTLLLR-ESHPKC-VFS 141
Query: 146 VLVKTYRECG-SAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
+ +Y+ C S+ F+LL++ +I V IV+++ + L +V T +AL+
Sbjct: 142 HFLDSYKRCKFSSTLGFNLLVQ---NYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLN 198
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ + + I+ +E++ D AG VRP+ +T +A++ F
Sbjct: 199 GLLKVRKFITVWELF------DESVNAG----------VRPDPYTCSAVVRSMCELKDFL 242
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ ++ M G + +Y+VL+ C+ R+ EA ++ + K + DVV Y T++
Sbjct: 243 RAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLV 302
Query: 325 GGFCEI-----------------------------------GEMARAEEFFREMGLSGVE 349
GFC + G++ A E ++G G
Sbjct: 303 LGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFV 362
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
+ + L+N C+ GD+D A L+Y++M P G T +LI C R+ A+
Sbjct: 363 PNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISY 422
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
R+++ G+ T +Y LI G C+ G + A + EM KG EP+ +++ I GY
Sbjct: 423 FD-RMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYC 481
Query: 470 KEGNVEMATMLRKEMFENQV 489
K+ V+ A L +M +N +
Sbjct: 482 KDLQVQKAFKLYNKMIDNGI 501
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 162/335 (48%), Gaps = 20/335 (5%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV----FGLDSDAT 230
+++ V++ R L +GL+ V T L+ R + +G ++ E+ F A
Sbjct: 274 DRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAV 333
Query: 231 AGIGKDVKR----------VVRVR-----PNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
+G+ +++ VV+V PN+ +NAL+ + G +K E ++ M+
Sbjct: 334 SGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSL 393
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
+ P+ +YS+L+ FC R+ A ++ M + V AYN++I G C+ G+++
Sbjct: 394 MNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSA 453
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
AE F EM GVE ++ TF L++GYC+ V A +YN M G P T LI
Sbjct: 454 AESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALIS 513
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
LC ++ EA ++ +V+ + PTE +Y LI+G C +GK+++A ++ +M KG
Sbjct: 514 GLCSTNKMAEASELFD-ELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLV 572
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
P Y I G G V A ++ + V+
Sbjct: 573 PDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVK 607
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 134/250 (53%), Gaps = 7/250 (2%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V+ +N+L+ G + G E +++EM G EP +++ L++ +C++ ++++A KL+
Sbjct: 435 VYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYN 494
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+M D + +V + +I G C +MA A E F E+ ++ + VT+ L+ GYCR G
Sbjct: 495 KMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDG 554
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA---LDILKARVVKFGLFPTE 423
+D A + DM +KG P+ T LI LC RV +A +D L + VK E
Sbjct: 555 KIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKL----NE 610
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
Y L+ G C+EG++ EAL EM+ +G L ++ IDG +K+ + + L K+
Sbjct: 611 MCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKD 670
Query: 484 MFENQVRQED 493
M + +R ++
Sbjct: 671 MHDQGLRPDN 680
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 124/252 (49%), Gaps = 6/252 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P TF +L+ G+ ++ +K ++ +M G P+ Y+++ L++ C +M EA
Sbjct: 466 VEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEAS 525
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L++E+ ++ ++ V YN +I G+C G++ +A E +M G+ + T+ L++G
Sbjct: 526 ELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGL 585
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G V A +D+ ++ + L+ C + R+ EAL +++ G+
Sbjct: 586 CSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSA-SCEMIQRGINMD 644
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA----- 477
+ LI G ++ + + +M +G P IY++ ID Y KEG+ + A
Sbjct: 645 LVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWD 704
Query: 478 TMLRKEMFENQV 489
M+ +E F N V
Sbjct: 705 LMVTEECFPNVV 716
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 143/314 (45%), Gaps = 23/314 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ + ++ G++ V T ALI + + E++ E+
Sbjct: 485 QVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDEL------------- 531
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
V+R +++P T+N L+ G+ R+G +K ++ +M + G PD Y+Y L++ C
Sbjct: 532 -VER--KIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCST 588
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ +A+ +++ +NV+ + + Y+ ++ G+C+ G + A EM G+ V
Sbjct: 589 GRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCH 648
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK---RRVFEALDILKA 412
L++G + D + + DM +G P+ +I + ++ FE D++
Sbjct: 649 AVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLM-- 706
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
V FP +Y L+ GLC+ G+M+ A + M P+ Y F+D KEG
Sbjct: 707 --VTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEG 764
Query: 473 NVEMATMLRKEMFE 486
N++ A L M +
Sbjct: 765 NMKEAIGLHHAMLK 778
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 8/233 (3%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
D+ +M G PD Y+ ++ + +E ++A + W+ M + +VV Y ++ G
Sbjct: 666 DLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGL 725
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ GEM RA F+ M + V +S+T+ ++ + G++ AI +++ M KG
Sbjct: 726 CKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANT 784
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T ++I C R EA +L + + + G+FP +Y LI C G + ++K+
Sbjct: 785 VTHNIIIRGFCKLGRFHEATKVL-SEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWD 843
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF------ENQVRQEDG 494
M+ +G EP L Y+ I G G ++ A LR +M +N+ Q+ G
Sbjct: 844 TMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNKYLQKKG 896
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 6/281 (2%)
Query: 210 KGVISGYEIYREVF-GLDSDATAGIGKDVKRVV---RVRPNVHTFNALMVGFYREGAFEK 265
KG++ YR + GL S KD + V+ N ++AL+ G+ +EG +
Sbjct: 569 KGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLME 628
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
EM + G D ++VL+ ++ + L ++M D+ + D V Y ++I
Sbjct: 629 ALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMID 688
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
+ + G +A E + M + VT+ L+NG C+AG++D A L++ M P
Sbjct: 689 TYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPP 748
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
T + L + + EA+ + A + GL ++ +I+G C+ G+ EA KV
Sbjct: 749 NSITYGCFLDNLTKEGNMKEAIGLHHAMLK--GLLANTVTHNIIIRGFCKLGRFHEATKV 806
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+EM G P YS I Y + GNV + L M
Sbjct: 807 LSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLN 847
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 2/180 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+ ALM G + G ++ ++ M P+ +Y + +E M+EA L
Sbjct: 713 PNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGL 772
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M K + + V +N II GFC++G A + EM +G+ VT+ L+ YCR
Sbjct: 773 HHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCR 831
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G+V +++ +++ M +G EP+ +LI C + +A + L+ +++ G+ P K
Sbjct: 832 SGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFE-LRDDMLRRGIIPDNK 890
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 8/176 (4%)
Query: 231 AGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
AG+ + V PN T+ + +EG ++ + M + G + ++++++
Sbjct: 734 AGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIR 792
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
FC+ R EA K+ EM + + D V Y+T+I +C G + + + + M G+E
Sbjct: 793 GFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEP 852
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
V + L+ G C G++D A + +DM R+G P+ ++ K +FEA
Sbjct: 853 DLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNKYLQ-------KKGTIFEA 901
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 206/450 (45%), Gaps = 41/450 (9%)
Query: 71 PTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRV 130
P ++ ++ P +ALRFF + K S ++ I+ IL L+ A V+
Sbjct: 105 PQLLIRVLYSIREKPTIALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMER 164
Query: 131 ALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCL--EVKNIEKI----------E 178
+ + +VL+ Y VF+ +++ +VKN +I
Sbjct: 165 IISF----EMYGIVDVLIGGYLNY-QCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLV 219
Query: 179 TCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE----------------V 222
+++ RM+ G+ V+T N ++ +G V ++ + +
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279
Query: 223 FGLD-----SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
GL A I + K +RV P +T+N L+ G+ ++G + +W EM G
Sbjct: 280 NGLSKKGELQQAKGLIQEMAKAGLRVSP--YTYNPLICGYCKKGLLVEALALWEEMVTRG 337
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
P S++ +M FC+E +M +A + +M KN+ D+++YNT+I GFC +G + A
Sbjct: 338 VSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAF 397
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
E+ + + VT+ L++G CR GD+++A+ + DM +G P+ T VL+
Sbjct: 398 ILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGA 457
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C + A + ++ GL P + +Y I G + G +A K+Q EM+ KGF P
Sbjct: 458 CKLGNMLMAKEFFD-EMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPD 516
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ Y+ F++G K GN+E A L ++M +
Sbjct: 517 VITYNVFVNGLCKLGNLEEAGELLQKMIRD 546
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 122/251 (48%), Gaps = 1/251 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P+V N ++ + K +V+ M G P +Y+ ++ FC+ ++ A
Sbjct: 197 RFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRA 256
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L +M+++ V +N +I G + GE+ +A+ +EM +G+ S T+ L+ G
Sbjct: 257 LDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICG 316
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC+ G + A+ ++ +M +G P ++ ++ C + ++ +A L + ++K L P
Sbjct: 317 YCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQL-SDMLKKNLMP 375
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
SY LI G C G + EA + E+ + ++ Y+ IDG + G++E A L+
Sbjct: 376 DIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLK 435
Query: 482 KEMFENQVRQE 492
++M + +
Sbjct: 436 EDMINRGIHPD 446
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 134/300 (44%), Gaps = 19/300 (6%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+ET + + +++RG+ V T L+ + ++ E + E+
Sbjct: 428 LETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLH------------ 475
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
V + P+ + A +VG + G K + EM G PD +Y+V + C+
Sbjct: 476 ----VGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLG 531
Query: 297 RMREAEKLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ EA +L ++M RD +V D V Y + + E G + E F +M G + VT+
Sbjct: 532 NLEEAGELLQKMIRDGHVP-DHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTY 590
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++ + G +D A+ + +M KG P T VLI C R++ +A
Sbjct: 591 TVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQE 650
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K G+FP + +Y LI C GK +EAL++ A+M+GK P + A + K+ V+
Sbjct: 651 K-GIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQ 709
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 112/250 (44%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V T+ L+ G + G ++ + EM +G PD ++Y+ + + +A
Sbjct: 443 IHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAF 502
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL EEM K DV+ YN + G C++G + A E ++M G VT+ ++ +
Sbjct: 503 KLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAH 562
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G + ++ DM +G P T VLI R+ A+ K G+ P
Sbjct: 563 MENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEK-GVVPN 621
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI G C+ KM++A K EM KG P+ Y+ I+ G + A L
Sbjct: 622 VITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYA 681
Query: 483 EMFENQVRQE 492
+M ++R +
Sbjct: 682 QMLGKRIRPD 691
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 13/250 (5%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ T+N L+ G R G E + +M G PD +Y+VL+ C+ M A++ +
Sbjct: 411 NIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFF 470
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM + D AY I G ++G+ A+A + EM G +T+ VNG C+
Sbjct: 471 DEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKL 530
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFEALDILKARVVKFGL 419
G+++ A + M R G P+ T + G L + R +F D+L G
Sbjct: 531 GNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIF--YDMLSR-----GQ 583
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
PT +Y LI G+++ A+ EM KG P++ Y+ I+G+ K ++ A
Sbjct: 584 TPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACK 643
Query: 480 LRKEMFENQV 489
EM E +
Sbjct: 644 FFIEMQEKGI 653
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 69/133 (51%), Gaps = 5/133 (3%)
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L+ GY +LV+ M R F P+ ++ L DK + +AL++ + + ++
Sbjct: 177 LIGGYLNY----QCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRM-MGEY 231
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G+ PT +Y ++ C+ G+++ AL + +M +G PS ++ I+G K+G ++ A
Sbjct: 232 GIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQA 291
Query: 478 TMLRKEMFENQVR 490
L +EM + +R
Sbjct: 292 KGLIQEMAKAGLR 304
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 197/418 (47%), Gaps = 25/418 (5%)
Query: 91 FFSF--TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ + S +H+L SY T+IH L +++ A+ +I+V + +F ++
Sbjct: 3 FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATIL 62
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+T S +VF LI LE + C + R L V TC ++ + +
Sbjct: 63 ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTR---EHKLWVPFDTCRKVLEHLMK 119
Query: 209 GKGVISGYEIYREVFGLD----------------SDATAGIGKDVKRVVR---VRPNVHT 249
+ + Y E+ D + + V + +RP+V +
Sbjct: 120 LRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N LM G+ R G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + + V + T+I G C+ G + A E ++ M + +T+ L+ G C+ GD+
Sbjct: 240 VKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + ++M KG +P+ T LI C + + A K R+++ + + +Y L
Sbjct: 300 QAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRK-RMIQGNIRLDDVAYTAL 358
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
I GLC+EG+ +A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM N
Sbjct: 359 ISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRN 416
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++ + EM+ G +PD ++Y+ L+ C+E + A K
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKH 339
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +C+
Sbjct: 340 RKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCK 399
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 400 KGDVWKGSKLLKEMQRNGHVPSVVTYNVLM 429
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ L + T N LI+ + + + + + +D + G+
Sbjct: 262 RVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXL------IDEMSMKGL-- 313
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG + M + D +Y+ L++ C+E
Sbjct: 314 --------KPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQE 365
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R +AEK+ EM ++ D+ Y II FC+ G++ + + +EM +G S VT+
Sbjct: 366 GRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTY 425
Query: 356 EHLVNG 361
L+NG
Sbjct: 426 NVLMNG 431
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 200/427 (46%), Gaps = 52/427 (12%)
Query: 91 FFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL----FEV 146
F S ++ L K+ Y+ IIH+L+ A+L AR ++R ++ +N + ++ F V
Sbjct: 57 FHSVSRRADLAKNP-QLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNV 115
Query: 147 LVKTYRECGSAPFVFDLLIKCCLEVKNIE-----------------------------KI 177
L + P VF +LI E+ +E +
Sbjct: 116 LSR-LESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRF 174
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
+T + +++RG S V T LI R + + ++ E+ I K
Sbjct: 175 DTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEM----------IEK-- 222
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
++ P V + L+ G E + E ++ M G P+ Y+Y+ +M +C+
Sbjct: 223 ----KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAH 278
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+++A +L++EM + +VV + +I G C+ EM A +F +M GV + +
Sbjct: 279 VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++GYC+AG++ A+ +++++ + P+ T +LI LC R+ EA D L + K
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA-DGLLQEMKKK 397
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P +Y LI G C+EG ME+A++V ++M KG EP++ +S IDGY K G +E A
Sbjct: 398 GFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAA 457
Query: 478 TMLRKEM 484
L EM
Sbjct: 458 MGLYTEM 464
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 182/387 (47%), Gaps = 35/387 (9%)
Query: 121 IGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIE 178
I P + + +R + ++ E + +T R G P + ++ ++ ++ +++K
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK-- 281
Query: 179 TCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK 238
+++ + ++ GL V T LI + + ++S + F +D A G
Sbjct: 282 -ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARK-----FLID---MASFG---- 328
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
V PN+ +N L+ G+ + G + + E+ + PD ++YS+L+ C RM
Sbjct: 329 ----VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EA+ L +EM+ K + V YNT+I G+C+ G M +A E +M G+E + +TF L
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++GYC+AG +++A+ +Y +M KG P+ LI EA + K + + G
Sbjct: 445 IDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHK-EMQEAG 503
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF-------------EPSLEIYSAFI 465
L P + LI GLC++G++ +A+K+ G P+ +Y+A I
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563
Query: 466 DGYMKEGNVEMATMLRKEMFENQVRQE 492
G +G + A+ +M + +R +
Sbjct: 564 QGLCTDGRIFKASKFFSDMRCSGLRPD 590
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 47/256 (18%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N L+ G+ +EG EK +V +M G EP+ ++S L+ +C+ +M A L
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM K + DVVAY +I G + G A +EM +G+ + T L++G C+
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520
Query: 365 AGDVDSAILVY-------------NDMCRKGFEPEGSTIEVLIGELCDKRRVFEA----- 406
G + AI ++ N++ R P LI LC R+F+A
Sbjct: 521 DGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFS 580
Query: 407 -----------------------------LDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
+ +L+A ++K G+ P Y L KG E G
Sbjct: 581 DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESG 640
Query: 438 KMEEALKVQAEMVGKG 453
++ AL+ ++ G G
Sbjct: 641 YLKSALRCSEDLSGIG 656
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 231 AGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
A +G + V++ + P+V + AL+ G +++G ++ + EM G P+ ++ S L+
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515
Query: 290 AVFCEERRMREAEKLW-------------EEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
C++ R+ +A KL+ E+ + V Y +I G C G + +A
Sbjct: 516 DGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKA 575
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+FF +M SG+ T ++ G+ RA + +++ D+ + G P S VL
Sbjct: 576 SKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVL 632
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K + P ++ ++ GL ++G+ + KV +MV +G P++ Y IDG ++G+
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 476 MATMLRKEMFENQV 489
A L EM E ++
Sbjct: 211 KAFRLFDEMIEKKI 224
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 193/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L ++I A+ +I++ + +F J++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMIPEAKXLIQIVVSRKGKGSASAVFAAJLETKGTQISDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC +I + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM D + + V
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E + +M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFEYRK-RMIKENIRLDXVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I ++S+ LS + T N LI+ + + + ++ E+
Sbjct: 256 RVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEM------------- 302
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ ++P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 303 ---SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 194/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G + + M G +PD Y+YSVL+ C+E +M +A L++EM DK + + V
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 78/143 (54%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM G +PD +Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + + +M R G+ P
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYMP 414
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ E+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI------------ 303
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ ++P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 304 ----MKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 194/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASSVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM D + + V
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFKYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 79/143 (55%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM+ G +PD +Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K + M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 332 KYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + + +M R G+ P
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYMP 414
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ +D + G+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E M + D +Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 444
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 218/467 (46%), Gaps = 54/467 (11%)
Query: 16 PKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFS 75
P+ K Q S+F++S P VV L+ +K W+ L + +S P
Sbjct: 21 PRNK-QPFSRFNSSCVNIPD---------VVDLI----AKQYWSELKTHLKST-NPIALL 65
Query: 76 QIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSP 135
L + L LR+F+++Q + HSL ++H L+ A+ R + +++
Sbjct: 66 HQLLTSGADSDLTLRYFTWSQKELKLSHSLELTFRMLHSLAYAKKYSKIRSFLDNCVQND 125
Query: 136 ENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
+N P +F + + + + D+L+ + KN+ K + + GL +
Sbjct: 126 KNYPVSFIFHAISVSGDSFCANSIIVDILVWA--DAKNL-KTRLGFEAFKRASDYGLKLS 182
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
V++CN L+ G++ Y+ +DA I K++K + PN TFN L+
Sbjct: 183 VTSCNPLM------SGLVKMYK---------ADA---ILKEMK-ADGICPNEVTFNILID 223
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
GF + V+ EM R G +P+ +Y+ L+ C ++ EA L ++M + +E
Sbjct: 224 GFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEP 283
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
+++ +N ++ GFC+ + +A E F +M + + T+ L++ YC+ +++ A +Y
Sbjct: 284 NIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALY 343
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDK------RRVFEALDI--LKARVVKFGLFPTEKSYM 427
M KG P+ ST LI LC K R +D LKA ++ +Y
Sbjct: 344 RIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLI---------TYN 394
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
L+ LC +G+M++ L++ EM KG +PS Y+ IDGY KEGN+
Sbjct: 395 ILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGNL 441
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 19/235 (8%)
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
AF++ D ++++ C P LM+ +M +A+ + +EM+ + + V +N
Sbjct: 170 AFKRASDYGLKLSVTSCNP-------LMSGLV---KMYKADAILKEMKADGICPNEVTFN 219
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
+I GFC ++ A + F EM GV+ + VT+ L+NG C G V+ A + + M
Sbjct: 220 ILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMVNS 279
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEA----LDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
EP T L+ C + V +A D+ K R+ P +Y LI C++
Sbjct: 280 CLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRIT-----PNVTTYNILIDAYCKDE 334
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
ME+A + M+GKG P + Y+ I G ++G++E A EM ++ +
Sbjct: 335 NMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKAD 389
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 8/154 (5%)
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
E F+ G++ S + L++G + D+ + +M G P T +LI
Sbjct: 169 EAFKRASDYGLKLSVTSCNPLMSGLVKMYKADA---ILKEMKADGICPNEVTFNILIDGF 225
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C+ + V A+ + A + + G+ P +Y LI GLC GK+ EA ++ +MV EP+
Sbjct: 226 CNDKNVSVAMKVF-AEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEPN 284
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
+ ++A ++G+ K V+ A E+FE+ +Q
Sbjct: 285 IITHNALLNGFCKNKMVKQAG----ELFEDMPKQ 314
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 194/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G + + M G +PD Y+YSVL+ C+E +M +A L++EM DK + + V
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKFTYTTLIDGNCKEGDLETAFEYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEM------QRDG 411
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM G +PD ++Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + +M R G++P
Sbjct: 392 CKKGDVWXGSKLLKEMQRDGYKP 414
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ E+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI------------ 303
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ ++P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 304 ----MKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G + S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 130/246 (52%), Gaps = 1/246 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P++ ++N L+ G + ++ + +EM GC P+ + + LM C++ RM EA
Sbjct: 29 VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAM 88
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L E M+ K + DVV Y T+I GFC G + R +E F EM G+ ++ VT+ LV+G
Sbjct: 89 ELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGL 148
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G A V N M G P+ T LI LC R A+D+L V K G P+
Sbjct: 149 CRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEK-GEEPS 207
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ GLC+EG + +A K+ M+ KG + + Y+ + G +G V+ A L
Sbjct: 208 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 267
Query: 483 EMFENQ 488
MF+N+
Sbjct: 268 SMFDNE 273
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 3/250 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N L+ G +EG + M G + D +Y+ LM C++ ++ EA KL
Sbjct: 206 PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL 265
Query: 305 WEEMRDKN--VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ M D +E +V +N +IGG C+ G + +A + R+M G + VT+ L+ G
Sbjct: 266 FNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGC 325
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+AG + A+ ++ + GF P T +LI C K R+ L + GL P
Sbjct: 326 LKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC-KMRMLNIAKGLFCEMRTHGLNPA 384
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y L+ LC+EG +E+A + EM EP + ++ IDG +K G+ + L+
Sbjct: 385 LFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQM 444
Query: 483 EMFENQVRQE 492
+M E +R +
Sbjct: 445 KMVEMGLRPD 454
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 1/237 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
N ++ G R G + + EM R PD SY+ L+ C+ ++++EA L EM
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ V T++ G C+ G M A E M G ++ V + L++G+C G++D
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
++++M KG T L+ LC + EA +L A + + G+ P +Y L
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNA-MAEHGIHPDVVTYTGL 179
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
I GLC++G+ A+ + MV KG EPS Y+ + G KEG V A + + M E
Sbjct: 180 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIE 236
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 142/304 (46%), Gaps = 22/304 (7%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG----LDSDA------TAG 232
I+RM++ +G V T N L+ + V +++ +F L+ + G
Sbjct: 230 ILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGG 289
Query: 233 IGKD--VKRVVRVR---------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
+ K+ + + V++ N+ T+N L+ G + G ++ ++W ++ LG P+
Sbjct: 290 LCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPN 349
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
++YS+L+ FC+ R + A+ L+ EMR + + YNT++ C+ G + +A+ F+
Sbjct: 350 SFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQ 409
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EMG + E ++F +++G +AGD + M G P+ T LI L
Sbjct: 410 EMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLG 469
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ EA L+ R+V G P Y L+KGL +G E + + +M KG +I
Sbjct: 470 ELDEAKSALE-RMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIV 528
Query: 462 SAFI 465
S +
Sbjct: 529 STIL 532
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 21/280 (7%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKV 196
D LKLF + F F++LI C E ++ V I R ++ +G +
Sbjct: 260 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKE----GRLTKAVKIHRKMVKKGSCGNL 315
Query: 197 STCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVG 256
T N L+ + + E++++V L PN T++ L+ G
Sbjct: 316 VTYNMLLGGCLKAGKIKEAMELWKQVLDLG----------------FVPNSFTYSILIDG 359
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
F + + ++ EM G P + Y+ LMA C+E + +A+ L++EM + N E D
Sbjct: 360 FCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPD 419
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
++++NT+I G + G+ +E +M G+ ++TF L+N + G++D A
Sbjct: 420 IISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALE 479
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
M GF P+ + L+ L K E +++L K
Sbjct: 480 RMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 519
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 1/172 (0%)
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
N ++ G C G + A REMG V V++ L+NG C+A + A+ + +M
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
G P T L+ LC R+ EA+++L+A + K G Y LI G C G ++
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEA-MKKKGFDADVVLYGTLISGFCNNGNLD 120
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
++ EM+GKG ++ YS + G + G + A + M E+ + +
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPD 172
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 169/314 (53%), Gaps = 17/314 (5%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
N + + +++ + ++G+ V T N+LI + +G SDA+
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN--------------YGRWSDASRL 313
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+ ++R ++ PNV TF+AL+ F +EG + E ++ EM + +PD ++YS L+ F
Sbjct: 314 LSDMIER--KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C R+ EA+ ++E M K+ +VV YNT+I GFC+ + E FREM G+ ++
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ L++G+ +A + D+A +V+ M G P+ T +L+ LC+ +V AL + +
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ + + P +Y +I+G+C+ GK+E+ + + KG +P++ Y+ + G+ ++G
Sbjct: 492 -LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 550
Query: 473 NVEMATMLRKEMFE 486
E A L +EM E
Sbjct: 551 LKEEADALFREMKE 564
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 38/297 (12%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
DA G VK R P++ F+ L+ + F+ V + +M LG + Y+YS+
Sbjct: 64 DAVNLFGDMVKS--RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE----------IGEMA--- 334
L+ FC ++ A + +M E D+V N+++ GFC +G+M
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 335 -------------------RAEE---FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
RA E M + G + VT+ +VNG C+ GD+D A+
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+ M + EP +I LC+ + V +AL++ K G+ P +Y LI+
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRC 300
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
LC G+ +A ++ ++M+ + P++ +SA ID ++KEG + A L EM + +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 143/327 (43%), Gaps = 22/327 (6%)
Query: 159 FVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
+ + +LI C C ++ + ++ +M G + T N+L+ G G
Sbjct: 117 YTYSILINCFCRR----SQLSLALAVLAKMMKLGYEPDIVTLNSLL------NGFCHGNR 166
Query: 218 IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
I SDA + +G+ V+ + +P+ TFN L+ G +R + + M G
Sbjct: 167 I--------SDAVSLVGQMVE--MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C+PD +Y +++ C+ + A L ++M +E VV YNTII C + A
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
F EM G+ + VT+ L+ C G A + +DM + P T LI
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+ ++ EA + L ++K + P +Y LI G C +++EA + M+ K P+
Sbjct: 337 VKEGKLVEA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ Y+ I G+ K V+ L +EM
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREM 422
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 1/211 (0%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P +S L++ + + L E+M++ + H++ Y+ +I FC +++ A
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+M G E VT L+NG+C + A+ + M G++P+ T LI L
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
R EA+ ++ VVK G P +Y ++ GLC+ G ++ AL + +M EP +
Sbjct: 199 HNRASEAVALVDRMVVK-GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
IY+ ID NV A L EM +R
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 141/304 (46%), Gaps = 27/304 (8%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
KL++ ++K R F + LI C+ ++++ + +++S+ V T N
Sbjct: 347 KLYDEMIK--RSIDPDIFTYSSLINGFCMH----DRLDEAKHMFELMISKDCFPNVVTYN 400
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
LI + K V G E++RE + G N T+ L+ GF++
Sbjct: 401 TLIKGFCKAKRVDEGMELFRE---MSQRGLVG-------------NTVTYTTLIHGFFQA 444
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
+ + V+ +M G PD +YS+L+ C ++ A ++E ++ +E D+ Y
Sbjct: 445 RECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
N +I G C+ G++ + F + L GV+ + VT+ +++G+CR G + A ++ +M
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Query: 381 KGFEPEGSTIEVLI-GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+G P+ T LI L D + A I + R + F + S + L+ + +G++
Sbjct: 565 EGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR---FVGDASTIGLVTNMLHDGRL 621
Query: 440 EEAL 443
+++
Sbjct: 622 DKSF 625
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 99/207 (47%), Gaps = 1/207 (0%)
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
Y Y + + ++ +A L+ +M +V ++ ++ ++ + +
Sbjct: 47 YDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 106
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G+ + T+ L+N +CR + A+ V M + G+EP+ T+ L+ C R
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ +A+ ++ ++V+ G P ++ LI GL + EA+ + MV KG +P L Y
Sbjct: 167 ISDAVSLV-GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQV 489
++G K G++++A L K+M + ++
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKI 252
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 23/345 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI------WEVSRGK-- 210
+ F ++IK C E N++K ++ +L GLS V LI ++ R +
Sbjct: 163 YSFGIMIKGCCENGNLDK---SFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLF 219
Query: 211 -------GVISG-YEIYREVFGLDSDATAGIGKDVKRVVRVR---PNVHTFNALMVGFYR 259
G+++ Y + GL G D+ +++ PN++T+N LM +
Sbjct: 220 FDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCG 279
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
EG + D++ EM G E + +Y+ L+ C E R+ EAEKL ++M+ V +++
Sbjct: 280 EGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLIT 339
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YNT+IGGFC++G + +A ++ +G+ S VT+ L+ GY +AG+ + +M
Sbjct: 340 YNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREME 399
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+G P T VLI + + +A I + + KFGL P Y LI GLC +G M
Sbjct: 400 GRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSS-MEKFGLVPDVYVYGVLIHGLCMKGNM 458
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+E+ K+ M EPS IY+ I GY KE N A L +EM
Sbjct: 459 KESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREM 503
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 43/285 (15%)
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG--CEPDCYSYSVLMAVFCE 294
V + + RPN+ FN+L+ R FEK W+ L + D YS+ +++ CE
Sbjct: 120 VDKGLVFRPNI--FNSLLGSLVRSNCFEKA---WLFFNELKERVKFDVYSFGIMIKGCCE 174
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ ++ +L ++D + +VV Y T+I G C+ G++ RA FF +MG G+ ++ T
Sbjct: 175 NGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYT 234
Query: 355 FEHLVNG-----------------------------------YCRAGDVDSAILVYNDMC 379
F L+NG YC G + A ++++M
Sbjct: 235 FTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMR 294
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+G E T LIG +C + RV+EA + L ++ K + P +Y LI G C+ G +
Sbjct: 295 ERGVEANVVTYNTLIGGMCREERVWEA-EKLVDQMKKAAVSPNLITYNTLIGGFCDVGNL 353
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++A + ++ G PSL Y+ I+GY K GN + L +EM
Sbjct: 354 DKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREM 398
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 120/266 (45%), Gaps = 20/266 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALI---------WEVSR-----GKGVISGYEI-YR 220
KI D+ + RG+ V T N LI WE + K +S I Y
Sbjct: 282 KICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYN 341
Query: 221 EVFGLDSDA----TAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+ G D A D + + P++ T+N L+ G+ + G ++ V D+ EM
Sbjct: 342 TLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGR 401
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G P + +VL+ + + M +A +++ M + DV Y +I G C G M +
Sbjct: 402 GISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKES 461
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ FR MG VE S V + +++GYC+ + A+ + +M KG P ++ +IG
Sbjct: 462 SKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGV 521
Query: 397 LCDKRRVFEALDILKARVVKFGLFPT 422
LC + +E ++L ++++ L P+
Sbjct: 522 LCKDGK-WEEAEVLLDKMIELQLKPS 546
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 111/251 (44%), Gaps = 21/251 (8%)
Query: 145 EVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
E LV ++ +P ++ LI +V N++K + +D L S GLS + T N L
Sbjct: 322 EKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLD---QLKSNGLSPSLVTYNIL 378
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
I S+ ++ RE+ G + P+ T L+ + R
Sbjct: 379 IEGYSKAGNWKGVADLAREMEGRG----------------ISPSKVTCTVLIDAYVRLQE 422
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
EK ++ M + G PD Y Y VL+ C + M+E+ KL+ M + +VE V YNT
Sbjct: 423 MEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNT 482
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G+C+ RA REM G+ + ++ ++ C+ G + A ++ + M
Sbjct: 483 MIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQ 542
Query: 383 FEPEGSTIEVL 393
+P S + ++
Sbjct: 543 LKPSASILNMI 553
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 95/234 (40%), Gaps = 35/234 (14%)
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKN-------------------------------- 312
Y ++ + + + +A + EM DK
Sbjct: 96 YESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELK 155
Query: 313 --VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
V+ DV ++ +I G CE G + ++ + + G+ + V + L++G C+ GD++
Sbjct: 156 ERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIER 215
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A L ++ M G T VLI L K + D+ + + GLFP +Y L+
Sbjct: 216 ARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKIN-GLFPNLYTYNCLM 274
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
C EGK+ A + EM +G E ++ Y+ I G +E V A L +M
Sbjct: 275 NEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQM 328
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 76/141 (53%), Gaps = 10/141 (7%)
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA--- 406
++++ +E ++N + ++ +D A++ +N+M KG + L+G L + FE
Sbjct: 91 TTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLV-RSNCFEKAWL 149
Query: 407 -LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+ LK R VKF ++ S+ +IKG CE G ++++ ++ + G P++ IY+ I
Sbjct: 150 FFNELKER-VKFDVY----SFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLI 204
Query: 466 DGYMKEGNVEMATMLRKEMFE 486
DG K G++E A + +M E
Sbjct: 205 DGCCKNGDIERARLFFDKMGE 225
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 199/455 (43%), Gaps = 61/455 (13%)
Query: 73 QFSQIALGLKN----NPHLALRFFSFT--QHKSLCKHSLSSYATIIHILSRARLIGPARD 126
+ +A GLK + LAL+F + Q KH Y HIL +AR+ A+
Sbjct: 825 SLNHMAYGLKQLRPVHGRLALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKS 884
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
++R + + F L+ TY C S P VFDLLI+ L+ I+ ++V +
Sbjct: 885 ILRHLCQMGIGSKSI--FGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGL 942
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+ G V TCN ++ + + K + ++RE+ SD + PN
Sbjct: 943 V---GFKPSVYTCNMILASMVKDKRTELVWSLFREM----SDKG------------ICPN 983
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V TFN L+ G EG +K ++ +M G P +Y+ L+ +C++ R + A +L +
Sbjct: 984 VGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELID 1043
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M K +E DV YN I C A+A ++M + + VT+ L+NG+ + G
Sbjct: 1044 YMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEG 1103
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKF------ 417
+ A V+N+M + P T LIG C D LD ++A ++
Sbjct: 1104 KIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYG 1163
Query: 418 ----GLFPTEK---------------------SYMFLIKGLCEEGKMEEALKVQAEMVGK 452
GL EK +Y LI GLC+ G ++EA+++ M
Sbjct: 1164 TLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKD 1223
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
G P + YS+ I+G+ + GN++ A + M+ +
Sbjct: 1224 GVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRS 1258
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 139/322 (43%), Gaps = 22/322 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+ + ++++ ++ +G+ V T N I + Y + +++
Sbjct: 1034 RYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKM------------- 1080
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R + PN T+N L+ GF +EG V+ EM++ P+C +Y+ L+ C
Sbjct: 1081 ---RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHV 1137
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
EA +L + M + + V Y T++ G C+ + A+ M ++ + + +
Sbjct: 1138 GDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAY 1197
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C+ G +D A+ + +M + G P+ T LI C + A +I+ R+
Sbjct: 1198 TVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEII-CRMY 1256
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG-----FEPSLEIYSAFIDGYMK 470
+ GL + Y LI C+ G + EA+KV A M G F ++ + S DG +
Sbjct: 1257 RSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLG 1316
Query: 471 EGNVEMATMLRKEMFENQVRQE 492
E + M R + N + +
Sbjct: 1317 EAEKFLCHMSRIGLVPNSITYD 1338
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 126/280 (45%), Gaps = 37/280 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+++L+ GF R G + +++ M R G + YS L+ FC+ + EA
Sbjct: 1225 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 1284
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++ M D N ++ C G++ AE+F M G+ +S+T++ ++NGY
Sbjct: 1285 KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 1344
Query: 363 CRAGDVDSAILVYNDMCRKGFEPE--------------GSTIE----------------- 391
GD +A ++DM + G P G+ +E
Sbjct: 1345 GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDS 1404
Query: 392 ----VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
L+ E C + EA+ + ++V+ + P +Y L+ GLC +GK A+ +
Sbjct: 1405 VMYNTLLAETCKSGNLHEAVALFD-KMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFG 1463
Query: 448 EMVGKG-FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+G+G P+ +Y+ +DG K G+ + A +EM +
Sbjct: 1464 TAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMK 1503
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 108/241 (44%), Gaps = 1/241 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ FNA++ R G K D + M G P+ +Y++L+ F +++ + L
Sbjct: 1508 PDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSL 1567
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + + D + ++++I G + G + +M + G + TF L+N Y
Sbjct: 1568 YSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSE 1627
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G + A + N M G P+ T + L +K+ F ++ +++ G+ P
Sbjct: 1628 SGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL-NKKSAFRESTVVLHEMLENGVIPKHA 1686
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ LI G+C G ++ A K++ EM GF SA + G + G E A ++ M
Sbjct: 1687 QYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHM 1746
Query: 485 F 485
Sbjct: 1747 L 1747
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 101/238 (42%), Gaps = 1/238 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
TFN L+ + G K D+ M LG PD +Y+ + ++ RE+ + EM
Sbjct: 1617 TFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEM 1676
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ V Y T+I G C +G++ A + EM G S V +V G G
Sbjct: 1677 LENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKT 1736
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A+LV + M R P +T L+ C ++ EAL LK + GL +Y
Sbjct: 1737 EDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK-LKGVMELCGLKLDVVAYNV 1795
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI G+C G A ++ EM + P++ Y+ +D N+ L ++ E
Sbjct: 1796 LIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQE 1853
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 5/236 (2%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T N L+ R+G + E M+R+G P+ +Y ++ + A +++M
Sbjct: 1301 TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDM 1360
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
Y +++ G C+ G + A++F + SV + L+ C++G++
Sbjct: 1361 IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 1420
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A+ +++ M + P+ T L+ LC K + A+ + + + LFP Y
Sbjct: 1421 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 1480
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID-----GYMKEGNVEMATM 479
L+ GL + G + A EM+ KG P ++A ID G M + N +TM
Sbjct: 1481 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 1536
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 7/243 (2%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ G + G ++ + M + G PD +YS L+ FC ++ A+++ M
Sbjct: 1197 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMY 1256
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ + + Y+T+I FC+ G + A + + M +G + T LV+ CR G +
Sbjct: 1257 RSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLG 1316
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLI---GELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
A M R G P T + +I G + D F D ++K G P+ +Y
Sbjct: 1317 EAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFD----DMIKCGQHPSFFTY 1372
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
L+KGLC+ G + EA K + +Y+ + K GN+ A L +M +
Sbjct: 1373 GSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQ 1432
Query: 487 NQV 489
N V
Sbjct: 1433 NNV 1435
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 107/240 (44%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN + L+ G + G + + EM + G PD +++ ++ +M +A
Sbjct: 1473 PNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDF 1532
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ MR V ++ YN ++ GF + + R + M G+ +TF L+ G +
Sbjct: 1533 FSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSK 1592
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G D + + M +G + T +LI + + ++ +A D++ + G+FP
Sbjct: 1593 SGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNF-MNTLGVFPDRD 1651
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y + GL ++ E+ V EM+ G P Y I+G + G+++ A L+ EM
Sbjct: 1652 TYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM 1711
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ TF++L++G + G + + +M G D +++++L+ + E +MR+A
Sbjct: 1576 IFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAF 1635
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L M V D YN I G + + EM +GV + L+NG
Sbjct: 1636 DLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGM 1695
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR GD+ A + ++M GF ++ L + +A+ +L +++ L PT
Sbjct: 1696 CRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLD-HMLRMRLLPT 1754
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ L+ C + K+ EALK++ M G + + Y+ I G G+ A L +
Sbjct: 1755 IATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYE 1814
Query: 483 EM 484
EM
Sbjct: 1815 EM 1816
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 2/242 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
P+ T+ +L+ G + G + + + + D Y+ L+A C+ + EA
Sbjct: 1366 HPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVA 1425
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF-REMGLSGVESSSVTFEHLVNGY 362
L+++M NV D Y++++ G C G+ A F MG + + V + LV+G
Sbjct: 1426 LFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGL 1485
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+AG +A + +M +KG P+ +I + ++ +A D + + +G+ P
Sbjct: 1486 SKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFF-STMRWWGVCPN 1544
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G ++ + L + + M+ +G P + + I G K G ++ L
Sbjct: 1545 LATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLG 1604
Query: 483 EM 484
+M
Sbjct: 1605 KM 1606
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%)
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
+A++ G G E V M R+ P +++ LM FC + ++ EA KL M
Sbjct: 1724 SAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMEL 1783
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
++ DVVAYN +I G C G+ A A E + EM + + T+ LV+ A ++
Sbjct: 1784 CGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQ 1843
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGEL 397
+ D+ +G G + + L EL
Sbjct: 1844 GEKLLTDLQERGLISWGGSTQHLDKEL 1870
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 54/118 (45%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+R+ P + TF LM F R+ + + M G + D +Y+VL+ C
Sbjct: 1749 MRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAA 1808
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
A +L+EEMR +++ ++ Y ++ + + E+ ++ G+ S + +HL
Sbjct: 1809 AFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLISWGGSTQHL 1866
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 189/406 (46%), Gaps = 26/406 (6%)
Query: 87 LALRFFSFT--QHKSLCKHSLSSYATIIHILSRARLIGPARDVIR-VALRSPENDPKLKL 143
LAL+F + Q H + + HIL RAR+ PAR +++ ++L S ++ +
Sbjct: 52 LALKFLKWVVKQPGLDTDHIVQLFCITTHILVRARMYDPARHILKELSLMSGKSSF---V 108
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
F L+ TYR C S P VFD+LI+ L I+ ++I R++ G + V TCNA++
Sbjct: 109 FGALMATYRLCNSNPSVFDILIRVYLREG---MIQDSLEIFRLMGLYGFNPSVYTCNAIL 165
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
+ + +S + +E+ +KR ++ P+V TFN L+ EG+F
Sbjct: 166 GSIVKSCEDVSVWSFLKEM--------------LKR--KICPDVATFNILINVLCAEGSF 209
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
+K + +M + G P +Y+ ++ +C++ R + A +L + M K V DV YN +
Sbjct: 210 KKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNML 269
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I C A+ R+M + + VT+ L+NG+ G V A + N+M G
Sbjct: 270 IHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGL 329
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
P T LI + EAL + K GL TE SY L+ GLC+ + + A
Sbjct: 330 SPNHVTFNALIDGHISEGNFKEALKMFHMMEAK-GLIGTEVSYGVLLDGLCKNAEFDLAR 388
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
M G Y+ IDG K G ++ A ++ EM ++ +
Sbjct: 389 GFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGI 434
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 183/410 (44%), Gaps = 35/410 (8%)
Query: 100 LCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP- 158
LC+ + S+ ++ R R+I P L N+ K+ + L+ G +P
Sbjct: 273 LCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPN 332
Query: 159 -FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGL-SVKVS-------TCNALIWEVSRG 209
F+ LI + N ++ + + M+ ++GL +VS C ++++RG
Sbjct: 333 HVTFNALIDGHISEGNFKE---ALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARG 389
Query: 210 -------KGVISGYEIYREVF------GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVG 256
GV G Y + G +A + + K + P++ T++AL+ G
Sbjct: 390 FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKD--GIDPDIVTYSALING 447
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
F R G + +++ + R+G P+ YS L+ C ++E +++E M + D
Sbjct: 448 FCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPD 507
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
+N ++ C+ G++A AEEF R M G+ ++V+F+ L+NGY +G+ A V++
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFD 567
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF---LIKGL 433
+M + G P T L+ LC + A LK+ P + LI +
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKS----LQNVPAAVDTVMCNTLITAM 623
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
C+ G +++A+ + EMV + P Y++ I G ++G +A + KE
Sbjct: 624 CKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKE 673
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 139/332 (41%), Gaps = 52/332 (15%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+ + ++++ + +G++ V T N LI ++ R GY + R++
Sbjct: 243 RFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDM------------- 289
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R + PN T+N L+ GF EG + EM G P+ +++ L+ E
Sbjct: 290 ---RKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISE 346
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+EA K++ M K + V+Y ++ G C+ E A F+ M +GV +T+
Sbjct: 347 GNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 406
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++G C+ G +D A+++ N+M + G +P+ T LI C R+ A +I+ R+
Sbjct: 407 TGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIV-CRIY 465
Query: 416 KFGLFP---------------------------------TEKSYMF--LIKGLCEEGKME 440
+ GL P T + F L+ LC+ GK+
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVA 525
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
EA + M G P+ + I+GY G
Sbjct: 526 EAEEFMRCMTSDGILPNAVSFDCLINGYGSSG 557
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 10/247 (4%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN +F+ L+ G+ G K V+ EM ++G P ++Y L+ C+ + AE
Sbjct: 539 ILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAE 598
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K + +++ D V NT+I C+ G + +A F EM + S T+ L++G
Sbjct: 599 KFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGL 658
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD-----ILKARVVKF 417
CR G AIL K E G+ + + C +F+A + ++ K
Sbjct: 659 CRKGKTVIAILF-----AKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKL 713
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
GL + +I G GK+E+ + EM + P+L Y+ + GY K +V +
Sbjct: 714 GLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTS 773
Query: 478 TMLRKEM 484
ML + M
Sbjct: 774 FMLYRSM 780
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V T NA++ G+ R G EK D+ EM P+ +Y++L+ + + + + + L+
Sbjct: 718 DVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLY 777
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M + D + +II G CE + + + GVE TF L++ C
Sbjct: 778 RSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCAN 837
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G+++ A + N M G + +T + ++ L R E+ +L + K G+ P +
Sbjct: 838 GEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLH-EMSKQGISPESRK 896
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y+ L+ GLC G ++ A V+ EM+ P SA + K G + A++L + M
Sbjct: 897 YIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSML 956
Query: 486 E 486
+
Sbjct: 957 K 957
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ TFN L+ + G + E+ M G P+ S+ L+ + +A +
Sbjct: 506 PDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSV 565
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++EM Y +++ G C+ G + AE+F + + +V L+ C+
Sbjct: 566 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCK 625
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G++D A+ ++ +M ++ P+ T LI LC K + A+ K + L P +
Sbjct: 626 SGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKV 685
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y + G+ + G+ + + +M G + +A IDGY + G +E L EM
Sbjct: 686 MYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEM 745
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 128/316 (40%), Gaps = 20/316 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE-------------- 221
KIE D++ + ++ ++T N L+ S+ K V + + +YR
Sbjct: 734 KIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCY 793
Query: 222 --VFGLDSDATAGIGKDVKRVVRVRP---NVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+ G+ IG + + R + HTFN L+ G D+ M L
Sbjct: 794 SIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSL 853
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G D + +++V R +E+ + EM + + + Y ++ G C +G++ A
Sbjct: 854 GISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTA 913
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
EM + +V +V + G D A L+ M + P ++ L+
Sbjct: 914 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHL 973
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
C V EAL+ L+ + GL SY LI GLC +G M A ++ EM GF
Sbjct: 974 FCKNGNVTEALE-LRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLA 1032
Query: 457 SLEIYSAFIDGYMKEG 472
++ Y A + G + +G
Sbjct: 1033 NVTTYKALVGGILSQG 1048
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 115/246 (46%), Gaps = 27/246 (10%)
Query: 160 VFDLLI-KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
F++LI KCC +I D+V ++ S G+S+ +TC+A++ ++R +
Sbjct: 826 TFNMLISKCCAN----GEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMV 881
Query: 219 YREVF--GLDSDATAGIG--------KDVKRVVRVR----------PNVHTFNALMVGFY 258
E+ G+ ++ IG D+K V+ PNV +A++
Sbjct: 882 LHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALA 940
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ G ++ + M ++ P S++ LM +FC+ + EA +L M + ++ D+V
Sbjct: 941 KCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLV 1000
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG-DVDSAILVYND 377
+YN +I G C G+MA A E F EM G ++ T++ LV G G + ++ D
Sbjct: 1001 SYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKD 1060
Query: 378 MCRKGF 383
+ +GF
Sbjct: 1061 LLARGF 1066
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 120/310 (38%), Gaps = 72/310 (23%)
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM-------REAEK 303
N L+ + G +K ++ EM + PD ++Y+ L++ C + + +EAE
Sbjct: 617 NTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEA 676
Query: 304 ----------------------LW-------EEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
W ++M + DVV N +I G+ +G++
Sbjct: 677 RGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIE 736
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
+ + EMG + T+ L++GY + V ++ ++Y M G P+ T +I
Sbjct: 737 KTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSII 796
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG----------------- 437
+C+ + L ILKA + + G+ ++ LI C G
Sbjct: 797 LGICESNMLEIGLKILKAFICR-GVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGI 855
Query: 438 ------------------KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
+ +E+ V EM +G P Y ++G + G+++ A +
Sbjct: 856 SLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFV 915
Query: 480 LRKEMFENQV 489
+++EM +++
Sbjct: 916 VKEEMIAHKI 925
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 196/418 (46%), Gaps = 25/418 (5%)
Query: 91 FFSF--TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ + S +H+L SY T+IH L ++ A+ +I+V + +F ++
Sbjct: 3 FFTWLSSPSNSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIL 62
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+T S +VF LI LE + C + R L V TC ++ + +
Sbjct: 63 ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTR---EHKLWVPFDTCRKVLEHLMK 119
Query: 209 GKGVISGYEIYREVFGLD----------------SDATAGIGKDVKRVVR---VRPNVHT 249
K + Y E+ D + + V + +RP+V +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N LM G+ R G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEML 239
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + + V + T+I G C+ G + A E ++ M + +T+ L+ G C+ GD+
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + ++M KG +P+ T LI C + + A + K R+++ + + +Y L
Sbjct: 300 QANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRK-RMIQENIRLDDVAYTAL 358
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
I GLC+EG+ +A K+ EM+ G +P Y+ I+ + K+G+V + L KEM N
Sbjct: 359 ISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRN 416
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++ D+ EM G +PD +Y+ L+ C+E + A +
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEH 339
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C+ G AE+ REM G++ + T+ ++N +C+
Sbjct: 340 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCK 399
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 400 KGDVWKGSRLLKEMQRNGHVPSVVTYNVLM 429
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 44/250 (17%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY-SYSVLMAVFCEERRMREAE 302
R +++ F+ L+ + G +E RL E + + V +++ +
Sbjct: 69 RSDIYVFSGLITAYLESGFLRDA----IECYRLTREHKLWVPFDTCRKVLEHLMKLKYFK 124
Query: 303 KLW---EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+W EE+ + + +N ++ FC+ G++ A+ F + G+ S V++ L+
Sbjct: 125 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 184
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
NGY R GD+D +GF LK+ ++ G+
Sbjct: 185 NGYIRLGDLD-----------EGFR-------------------------LKSAMLASGV 208
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI GLC+E KM++A ++ EM+ KG P+ ++ IDG+ K+G V++A
Sbjct: 209 QPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAME 268
Query: 480 LRKEMFENQV 489
+ K M +
Sbjct: 269 IYKRMLSQSL 278
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ L + T N LI+ + + + ++ +D G+
Sbjct: 262 RVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDL------IDEMVMKGL-- 313
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 314 --------KPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL----DDVAYTALISG 361
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM ++ D Y II FC+ G++ + +EM +G S
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVPS 421
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 422 VVTYNVLMNG 431
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 203/443 (45%), Gaps = 42/443 (9%)
Query: 56 SRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHIL 115
S+W H + +TP+ S L P LA F F H + S + ++
Sbjct: 23 SQW-HFIKHLAHKITPSLISTALTSLHKTPDLA---FQFVTHIGFGDLDIKSKCLAMAVI 78
Query: 116 SRARLIGPARDVIR-------VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCC 168
S A P+ +++ ++R N+ + + +KTY ++DLLI+ C
Sbjct: 79 SHAPNSKPSLQLLKETINSGVYSIREVFNELGVARGVLGIKTY-------VLYDLLIRAC 131
Query: 169 LEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSD 228
E+K + C D M+ +G+ V CN ++ + + +Y E+F +
Sbjct: 132 CELKRGDDAFECFD---MMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRM--- 185
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
R++ +V TFN ++ +EG +K ++ M LG +P+ +Y+ +
Sbjct: 186 -------------RIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTI 232
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ +C R+ A +++ M+ + V+ D Y + I G C+ G++ A +M G+
Sbjct: 233 IHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGL 292
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
++VT+ L++GYC G+++ A + M R+G P ST +LI L ++ EA
Sbjct: 293 RPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADG 352
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
I+K K GL P +Y LI G C G +++A + EM+ KG +P+ Y++ I
Sbjct: 353 IIKEMSEK-GLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVL 411
Query: 469 MKEGNVEMATMLRKEMFENQVRQ 491
K G ++ A ++FE VR+
Sbjct: 412 SKRGRMKQA----DDLFEKIVRK 430
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 124/245 (50%), Gaps = 1/245 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ +RP T+N L+ G+ +G E D +M R G P +Y++L+ + +M E
Sbjct: 290 IGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDE 349
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A+ + +EM +K + D V YN +I G+C G + +A EM G++ + VT+ L+
Sbjct: 350 ADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIY 409
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
+ G + A ++ + RKG P+ LI C + A +LK + + +
Sbjct: 410 VLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLK-EMDQMKVV 468
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P E ++ L++G C EGK+E A ++ EM +G +P Y+ I GY K G+++ A +
Sbjct: 469 PDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRV 528
Query: 481 RKEMF 485
R EM
Sbjct: 529 RDEML 533
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 181/392 (46%), Gaps = 42/392 (10%)
Query: 102 KHSLSSYATIIH-ILSRARLIGPAR---DVIRVALRSPEN------------DPKLKLFE 145
K ++ +Y TIIH SR R+ G AR D+++ P++ + KL+
Sbjct: 223 KPNVVTYNTIIHGYCSRGRVEG-ARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEAS 281
Query: 146 VLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
+++ +E G P ++ LI N+E D ++ GL VST N LI
Sbjct: 282 GMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLE---MAFDYRDKMVREGLMPTVSTYNMLI 338
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
+ D GI K++ V P+ T+N L+ G+ R G
Sbjct: 339 HAL---------------FLDCKMDEADGIIKEMSEKGLV-PDSVTYNILINGYCRCGNV 382
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
+K + EM G +P +Y+ L+ V + RM++A+ L+E++ K + D++ +N +
Sbjct: 383 KKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNAL 442
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I G C G M RA +EM V VTF L+ G CR G V++A + +M +G
Sbjct: 443 IDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGI 502
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
+P+ + LI + + +A + + ++ G PT +Y LI+GLC+ + + A
Sbjct: 503 KPDHISYNTLISGYSKRGDMKDAFRV-RDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAE 561
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
++ EM+ KG P+ Y + I+G GNVE
Sbjct: 562 QLLKEMISKGITPNDNTYLSLIEGI---GNVE 590
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 126/249 (50%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P V T+N L+ + + ++ + + EM+ G PD +Y++L+ +C +++A L
Sbjct: 329 PTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTL 388
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EM K ++ V Y ++I + G M +A++ F ++ G+ + F L++G+C
Sbjct: 389 HDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCA 448
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G++D A + +M + P+ T L+ C + +V A ++++ + G+ P
Sbjct: 449 NGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSR-GIKPDHI 507
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
SY LI G + G M++A +V+ EM+ GF P+L Y+A I G K + A L KEM
Sbjct: 508 SYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEM 567
Query: 485 FENQVRQED 493
+ D
Sbjct: 568 ISKGITPND 576
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 195/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHNLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM D + + V
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K +++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRK-KMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 80/143 (55%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM+ G +PD +Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ ++M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 332 EYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + + +M R G+ P
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYMP 414
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ +D + G+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + +M + D +Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 190/405 (46%), Gaps = 23/405 (5%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDX 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+VF LI LE + C R+ V TC +I + + K +
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGF 123
Query: 219 YREVFGLDSDAT----------------AGIGKDVKRVVR---VRPNVHTFNALMVGFYR 259
Y E A+ + + V + +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G PD Y+YSVL+ C+E +M +A +L++EM B + + V
Sbjct: 184 IGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +R+M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGXCKEGDLETAFEYRK-RMIKENIRXDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+A K+ EM+ G +P + Y+ I+ K+G+V + L KEM
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEM 407
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I R ++S+ L + T N LI+ + + + +++ +D + G+
Sbjct: 256 RVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II C+ G++ + +EM G + VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVVT 418
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 159/326 (48%), Gaps = 20/326 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+ ++LI C + +++ V ++ + G+ T NALI + + E+
Sbjct: 129 YSLNILINCLCRLNHVD---FSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVEL 185
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+ E+ VKR PNV ++ ++ G + G DV+ +M + GC
Sbjct: 186 FNEM--------------VKR--GHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGC 229
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+P+ +YS ++ C++R + +A + EM ++ + +V YN+I+ GFC +G++ A
Sbjct: 230 KPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATR 289
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F+EM V ++VTF LV+G C+ G V A LV+ M KG EP+ ST L+ C
Sbjct: 290 LFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYC 349
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+R + EA + + + K G P SY LI G C+ +M+EA + AEM K P
Sbjct: 350 LQRLMNEAKKVFEIMIRK-GCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDT 408
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEM 484
YS + G + G + A L KEM
Sbjct: 409 VTYSTLMQGLCQLGRPKEALNLFKEM 434
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 154/312 (49%), Gaps = 17/312 (5%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
VD+ + + G V T + +I + + + L +DA + + V+R
Sbjct: 218 VDVFKKMEQNGCKPNVVTYSTIIDSLCKDR--------------LVNDAMEFLSEMVER- 262
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ PNV T+N+++ GF G + ++ EM P+ ++++L+ C+E + E
Sbjct: 263 -GIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSE 321
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A ++E M +K VE D+ YN ++ G+C M A++ F M G + ++ L+N
Sbjct: 322 ARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILIN 381
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
GYC++ +D A + +M K P+ T L+ LC R EAL++ K + +G
Sbjct: 382 GYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFK-EMCSYGPH 440
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y+ L+ G C+ G ++EALK+ M K EP++ Y+ I+G G +E+A L
Sbjct: 441 PNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKEL 500
Query: 481 RKEMFENQVRQE 492
++F + R +
Sbjct: 501 FSKLFGDGTRPD 512
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 128/242 (52%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P++ T+NALM G+ + + + V+ M R GC P +SY++L+ +C+ RRM EA+
Sbjct: 334 VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAK 393
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EM K + D V Y+T++ G C++G A F+EM G + VT+ L++G+
Sbjct: 394 SLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGF 453
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G +D A+ + M K EP +LI + ++ E L +++ G P
Sbjct: 454 CKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKL-EVAKELFSKLFGDGTRPD 512
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++Y +IKGL +EG +EA + +M GF P+ Y+ I G+++ + A L
Sbjct: 513 IRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLID 572
Query: 483 EM 484
EM
Sbjct: 573 EM 574
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 128/248 (51%), Gaps = 6/248 (2%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
+ RV NV++ N L+ R + V +M +LG PD +++ L+ C E +++
Sbjct: 121 LFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIK 180
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
EA +L+ EM + E +V++Y T+I G C+ G + A + F++M +G + + VT+ ++
Sbjct: 181 EAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTII 240
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+ C+ V+ A+ ++M +G P T ++ C+ ++ EA + K V + +
Sbjct: 241 DSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGR-DV 299
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY-----MKEGNV 474
P ++ L+ GLC+EG + EA V M KG EP + Y+A +DGY M E
Sbjct: 300 MPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKK 359
Query: 475 EMATMLRK 482
M+RK
Sbjct: 360 VFEIMIRK 367
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 128/256 (50%), Gaps = 3/256 (1%)
Query: 239 RVVRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
R+VR+ RP+V F + F ++ + V + +M + YS ++L+ C
Sbjct: 83 RMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLN 142
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ + + +M + D + +N +I G C G++ A E F EM G E + +++
Sbjct: 143 HVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYT 202
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
++NG C+ G+ A+ V+ M + G +P T +I LC R V +A++ L + +V+
Sbjct: 203 TVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFL-SEMVE 261
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G+ P +Y ++ G C G++ EA ++ EMVG+ P+ ++ +DG KEG V
Sbjct: 262 RGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSE 321
Query: 477 ATMLRKEMFENQVRQE 492
A ++ + M E V +
Sbjct: 322 ARLVFETMTEKGVEPD 337
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 72/151 (47%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
PN+ T+ L+ GF + G ++ + M EP+ Y++L+ ++ A++
Sbjct: 440 HPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKE 499
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+ ++ D+ Y +I G + G A + FR+M G +S ++ ++ G+
Sbjct: 500 LFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFL 559
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
+ D +AI + ++M K F ST ++L+
Sbjct: 560 QNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 57/119 (47%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ PN+ + L+ G + G E ++++ ++ G PD +Y+V++ +E EA
Sbjct: 473 KLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEA 532
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
L+ +M D + +YN +I GF + + + A EM + TF+ L++
Sbjct: 533 YDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 195/444 (43%), Gaps = 61/444 (13%)
Query: 74 FSQIALGLKN----NPHLALRFFSFT--QHKSLCKHSLSSYATIIHILSRARLIGPARDV 127
+ +A GLK + LAL+F + Q KH Y HIL +AR+ A+ +
Sbjct: 75 LNHMAYGLKQLRPVHGRLALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSI 134
Query: 128 IRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRML 187
+R + + F L+ TY C S P VFDLLI+ L+ I+ ++V ++
Sbjct: 135 LRHLCQMGIGSKSI--FGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLV 192
Query: 188 MSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNV 247
G V TCN ++ + + K + ++RE+ SD + PNV
Sbjct: 193 ---GFKPSVYTCNMILASMVKDKRTELVWSLFREM----SDKG------------ICPNV 233
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
TFN L+ G EG +K ++ +M G P +Y+ L+ +C++ R + A +L +
Sbjct: 234 GTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDY 293
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M K +E DV YN I C A+A ++M + + VT+ L+NG+ + G
Sbjct: 294 MICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGK 353
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKF------- 417
+ A V+N+M + P T LIG C D LD ++A ++
Sbjct: 354 IGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGT 413
Query: 418 ---GLFPTEK---------------------SYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
GL EK +Y LI GLC+ G ++EA+++ M G
Sbjct: 414 LLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 473
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMA 477
P + YS+ I+G+ + GN++ A
Sbjct: 474 VNPDVITYSSLINGFCRVGNIKSA 497
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 139/322 (43%), Gaps = 22/322 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+ + ++++ ++ +G+ V T N I + Y + +++
Sbjct: 283 RYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKM------------- 329
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R + PN T+N L+ GF +EG V+ EM++ P+C +Y+ L+ C
Sbjct: 330 ---RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHV 386
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
EA +L + M + + V Y T++ G C+ + A+ M ++ + + +
Sbjct: 387 GDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAY 446
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C+ G +D A+ + +M + G P+ T LI C + A +I+ R+
Sbjct: 447 TVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEII-CRMY 505
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG-----FEPSLEIYSAFIDGYMK 470
+ GL + Y LI C+ G + EA+KV A M G F ++ + S DG +
Sbjct: 506 RSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLG 565
Query: 471 EGNVEMATMLRKEMFENQVRQE 492
E + M R + N + +
Sbjct: 566 EAEKFLCHMSRIGLVPNSITYD 587
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 126/280 (45%), Gaps = 37/280 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+++L+ GF R G + +++ M R G + YS L+ FC+ + EA
Sbjct: 474 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 533
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++ M D N ++ C G++ AE+F M G+ +S+T++ ++NGY
Sbjct: 534 KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 593
Query: 363 CRAGDVDSAILVYNDMCRKGFEPE--------------GSTIE----------------- 391
GD +A ++DM + G P G+ +E
Sbjct: 594 GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDS 653
Query: 392 ----VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
L+ E C + EA+ + ++V+ + P +Y L+ GLC +GK A+ +
Sbjct: 654 VMYNTLLAETCKSGNLHEAVALFD-KMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFG 712
Query: 448 EMVGKG-FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+G+G P+ +Y+ +DG K G+ + A +EM +
Sbjct: 713 TAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMK 752
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 108/241 (44%), Gaps = 1/241 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ FNA++ R G K D + M G P+ +Y++L+ F +++ + L
Sbjct: 757 PDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSL 816
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + + D + ++++I G + G + +M + G + TF L+N Y
Sbjct: 817 YSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSE 876
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G + A + N M G P+ T + L +K+ F ++ +++ G+ P
Sbjct: 877 SGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL-NKKSAFRESTVVLHEMLENGVIPKHA 935
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ LI G+C G ++ A K++ EM GF SA + G + G E A ++ M
Sbjct: 936 QYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHM 995
Query: 485 F 485
Sbjct: 996 L 996
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 101/238 (42%), Gaps = 1/238 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
TFN L+ + G K D+ M LG PD +Y+ + ++ RE+ + EM
Sbjct: 866 TFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEM 925
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ V Y T+I G C +G++ A + EM G S V +V G G
Sbjct: 926 LENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKT 985
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A+LV + M R P +T L+ C ++ EAL LK + GL +Y
Sbjct: 986 EDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK-LKGVMELCGLKLDVVAYNV 1044
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI G+C G A ++ EM + P++ Y+ +D N+ L ++ E
Sbjct: 1045 LIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQE 1102
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 5/236 (2%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T N L+ R+G + E M+R+G P+ +Y ++ + A +++M
Sbjct: 550 TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDM 609
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
Y +++ G C+ G + A++F + SV + L+ C++G++
Sbjct: 610 IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 669
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A+ +++ M + P+ T L+ LC K + A+ + + + LFP Y
Sbjct: 670 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 729
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID-----GYMKEGNVEMATM 479
L+ GL + G + A EM+ KG P ++A ID G M + N +TM
Sbjct: 730 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 785
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 7/244 (2%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+ L+ G + G ++ + M + G PD +YS L+ FC ++ A+++ M
Sbjct: 445 AYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRM 504
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + + Y+T+I FC+ G + A + + M +G + T LV+ CR G +
Sbjct: 505 YRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKL 564
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLI---GELCDKRRVFEALDILKARVVKFGLFPTEKS 425
A M R G P T + +I G + D F D ++K G P+ +
Sbjct: 565 GEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFD----DMIKCGQHPSFFT 620
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y L+KGLC+ G + EA K + +Y+ + K GN+ A L +M
Sbjct: 621 YGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMV 680
Query: 486 ENQV 489
+N V
Sbjct: 681 QNNV 684
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 107/240 (44%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN + L+ G + G + + EM + G PD +++ ++ +M +A
Sbjct: 722 PNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDF 781
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ MR V ++ YN ++ GF + + R + M G+ +TF L+ G +
Sbjct: 782 FSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSK 841
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G D + + M +G + T +LI + + ++ +A D++ + G+FP
Sbjct: 842 SGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNF-MNTLGVFPDRD 900
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y + GL ++ E+ V EM+ G P Y I+G + G+++ A L+ EM
Sbjct: 901 TYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM 960
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ TF++L++G + G + + +M G D +++++L+ + E +MR+A
Sbjct: 825 IFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAF 884
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L M V D YN I G + + EM +GV + L+NG
Sbjct: 885 DLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGM 944
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR GD+ A + ++M GF ++ L + +A+ +L +++ L PT
Sbjct: 945 CRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLD-HMLRMRLLPT 1003
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ L+ C + K+ EALK++ M G + + Y+ I G G+ A L +
Sbjct: 1004 IATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYE 1063
Query: 483 EM 484
EM
Sbjct: 1064 EM 1065
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 2/242 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
P+ T+ +L+ G + G + + + + D Y+ L+A C+ + EA
Sbjct: 615 HPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVA 674
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF-REMGLSGVESSSVTFEHLVNGY 362
L+++M NV D Y++++ G C G+ A F MG + + V + LV+G
Sbjct: 675 LFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGL 734
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+AG +A + +M +KG P+ +I + ++ +A D + + +G+ P
Sbjct: 735 SKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFF-STMRWWGVCPN 793
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G ++ + L + + M+ +G P + + I G K G ++ L
Sbjct: 794 LATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLG 853
Query: 483 EM 484
+M
Sbjct: 854 KM 855
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%)
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
+A++ G G E V M R+ P +++ LM FC + ++ EA KL M
Sbjct: 973 SAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMEL 1032
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
++ DVVAYN +I G C G+ A A E + EM + + T+ LV+ A ++
Sbjct: 1033 CGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQ 1092
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGEL 397
+ D+ +G G + + L EL
Sbjct: 1093 GEKLLTDLQERGLISWGGSTQHLDKEL 1119
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 54/118 (45%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+R+ P + TF LM F R+ + + M G + D +Y+VL+ C
Sbjct: 998 MRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAA 1057
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
A +L+EEMR +++ ++ Y ++ + + E+ ++ G+ S + +HL
Sbjct: 1058 AFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLISWGGSTQHL 1115
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 173/350 (49%), Gaps = 20/350 (5%)
Query: 140 KLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC 199
++++ E LV TY CGS P VFDLL++ ++ + + E C + R+L S+GL V ++ C
Sbjct: 9 RVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLR--EGC-EAFRVLKSKGLCVSINAC 65
Query: 200 NALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYR 259
N+L+ + + V +EIY+EV V+ V+V NV+T N ++ +
Sbjct: 66 NSLLGGLVKVGWVDLAWEIYQEV--------------VRSGVQV--NVYTLNIMINALCK 109
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
E + +M G PD +Y+ L+ +C + + EA +L + M K ++ V
Sbjct: 110 NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFT 169
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YN II G C+ G+ RA+ EM G+ + T+ L+ CR ++ A ++++M
Sbjct: 170 YNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMP 229
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+G P+ + LIG L + +AL + + GL P Y LI G C G M
Sbjct: 230 SQGVVPDLVSFSALIGLLSKNGCLDQALKYFR-DMKNAGLAPDNVIYTILIGGFCRNGVM 288
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EALKV+ EM+ +G + Y+ ++G KE + A L EM E V
Sbjct: 289 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 338
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 118/216 (54%), Gaps = 1/216 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++P+V T+N L+ GF + EKV ++W +M P+ SY +L+ +C + EA
Sbjct: 372 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEA 431
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+LW+EM +K E ++ NTI+ G+C G +A+EF M L G+ +T+ L+NG
Sbjct: 432 FRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING 491
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ + ++D A + N M G P+ T V++ + R+ EA +++ ++++ G+ P
Sbjct: 492 FIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA-ELIMLKMIERGVNP 550
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+Y LI G + ++EA +V EM+ +GF P
Sbjct: 551 DRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 131/247 (53%), Gaps = 1/247 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V T+N ++ G +E + ++++ EM G PD Y+++ L+ + ++ M +A L+
Sbjct: 306 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 365
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E M +N++ DVV YNT+I GFC+ EM + E + +M + + +++ L+NGYC
Sbjct: 366 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 425
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G V A ++++M KGFE T ++ C +A + L ++K G+ P +
Sbjct: 426 GCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK-GIVPDGIT 484
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI G +E M+ A + +M G P + Y+ ++G+ ++G ++ A ++ +M
Sbjct: 485 YNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMI 544
Query: 486 ENQVRQE 492
E V +
Sbjct: 545 ERGVNPD 551
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 130/251 (51%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ +TF L+ G+ ++G K ++ M + +PD +Y+ L+ FC+ M +
Sbjct: 338 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 397
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+LW +M + + + ++Y +I G+C +G ++ A + EM G E++ +T +V GY
Sbjct: 398 ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGY 457
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRAG+ A ++M KG P+G T LI + + A ++ ++ GL P
Sbjct: 458 CRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN-KMENSGLLPD 516
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y ++ G +G+M+EA + +M+ +G P Y++ I+G++ + N++ A +
Sbjct: 517 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 576
Query: 483 EMFENQVRQED 493
EM + +D
Sbjct: 577 EMLQRGFVPDD 587
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 146/318 (45%), Gaps = 22/318 (6%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE---------------VFGLDS---- 227
++ G+S +T N L+ E R ++ I+ E + GL S
Sbjct: 193 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 252
Query: 228 -DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
D +D+K + P+ + L+ GF R G + V EM GC D +Y+
Sbjct: 253 LDQALKYFRDMKNA-GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYN 311
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ C+E+ + EA++L+ EM ++ V D + T+I G+ + G M +A F M
Sbjct: 312 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR 371
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
++ VT+ L++G+C+ +++ ++NDM + P + +LI C+ V EA
Sbjct: 372 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEA 431
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ V K G T + ++KG C G +A + + M+ KG P Y+ I+
Sbjct: 432 FRLWDEMVEK-GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 490
Query: 467 GYMKEGNVEMATMLRKEM 484
G++KE N++ A L +M
Sbjct: 491 GFIKEENMDRAFALVNKM 508
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 152/265 (57%), Gaps = 3/265 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + ++R ++ PNV TF+AL+ F +EG + E ++ EM + +PD
Sbjct: 306 YGRWSDASRLLSDMIER--KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
++YS L+ FC R+ EA+ ++E M K+ +VV Y+T+I GFC+ + E FRE
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G+ ++VT+ L++G+ +A D D+A +V+ M G P T +L+ LC +
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ +A+ + + + + + P +Y +I+G+C+ GK+E+ ++ + KG P++ Y+
Sbjct: 484 LAKAMVVFE-YLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Query: 463 AFIDGYMKEGNVEMATMLRKEMFEN 487
I G+ ++G+ E A L K+M E+
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKED 567
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 119/258 (46%), Gaps = 3/258 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
SDA A + + V+ + +P+ TF L+ G + + + +M + GC+PD +Y
Sbjct: 170 SDAVALVDQMVE--MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ C+ + A L ++M +E DVV YNTII G C+ M A F EM
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+ T+ L++ C G A + +DM + P T LI + ++ EA
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ L ++K + P +Y LI G C +++EA + M+ K P++ YS I
Sbjct: 348 -EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 467 GYMKEGNVEMATMLRKEM 484
G+ K VE L +EM
Sbjct: 407 GFCKAKRVEEGMELFREM 424
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 127/248 (51%), Gaps = 5/248 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T ++L+ G+ + +M +G +PD ++++ L+ + EA L
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M + + D+V Y T++ G C+ G++ A ++M +E+ V + +++G C+
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+D A+ ++ +M KG P+ T LI LC+ R +A +L + +++ + P
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL-SDMIERKINPNVV 329
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI +EGK+ EA K+ EM+ + +P + YS+ I+G+ ++ A K M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA----KHM 385
Query: 485 FENQVRQE 492
FE + ++
Sbjct: 386 FELMISKD 393
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 116/239 (48%), Gaps = 1/239 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ +V +N ++ G + + +++ EM G PD ++YS L++ C R +A
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L +M ++ + +VV ++ +I F + G++ AE+ + EM ++ T+ L+NG
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C +D A ++ M K P T LI C +RV E +++ + + + GL
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR-EMSQRGLVG 431
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y LI G + + A V +MV G P++ Y+ +DG K G + A ++
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 133/296 (44%), Gaps = 8/296 (2%)
Query: 199 CNALIWEVSRGKGVISGYEIYR----EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALM 254
C + WE S EI R ++ +D DA G VK R P++ FN L+
Sbjct: 34 CGSGCWERSFASASGDYREILRNRLSDIIKVD-DAVDLFGDMVKS--RPFPSIVEFNKLL 90
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
+ FE V + +M LG D Y+YS+ + FC ++ A + +M E
Sbjct: 91 SAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYE 150
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
D+V ++++ G+C ++ A +M G + + TF L++G A+ +
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
+ M ++G +P+ T ++ LC + + AL +LK ++ K + Y +I GLC
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK-KMEKGKIEADVVIYNTIIDGLC 269
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+ M++AL + EM KG P + YS+ I G A+ L +M E ++
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 21/273 (7%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
D +FE+++ ++C + LIK + K ++E +++ R + RGL
Sbjct: 380 DEAKHMFELMIS--KDCFPNVVTYSTLIKGFCKAK---RVEEGMELFREMSQRGLVGNTV 434
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T LI + + + +++++ V V PN+ T+N L+ G
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVS----------------VGVHPNILTYNILLDGL 478
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G K V+ + R EPD Y+Y++++ C+ ++ + +L+ + K V +V
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
+AYNT+I GFC G A+ ++M G +S T+ L+ R GD +++ + +
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
M GF + STI ++ L D R LD+L
Sbjct: 599 MRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 631
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
D++ +M + P ++ L++ + + L E+M+ + HD+ Y+ I F
Sbjct: 69 DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C +++ A +M G E VT L+NGYC + + A+ + + M G++P+
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI L + EA+ ++ ++V+ G P +Y ++ GLC+ G ++ AL +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVD-QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+M E + IY+ IDG K +++ A L EM +R +
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
++ +A L+ +M +V +N ++ ++ + +M G+ T+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
+N +CR + A+ V M + G+EP+ T+ L+ C +R+ +A+ ++ ++V+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD-QMVE 181
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G P ++ LI GL K EA+ + +MV +G +P L Y ++G K G++++
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 477 ATMLRKEMFENQVRQE 492
A L K+M + ++ +
Sbjct: 242 ALSLLKKMEKGKIEAD 257
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 196/425 (46%), Gaps = 31/425 (7%)
Query: 91 FFSF--TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ + S +H+L Y T+IH L +++ A+ +I+V + +F +
Sbjct: 3 FFTWLSSPANSTFRHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIX 62
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+T S +VF LI LE + C + R V TC ++ + +
Sbjct: 63 ETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTR---EHKFWVPFDTCRKVLEHLMK 119
Query: 209 GKGVISGYEIYREVFGLD----------------SDATAGIGKDVKRVVR---VRPNVHT 249
K + Y E+ D J + V + +RP+V +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVS 179
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N LM G+ R G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + + V + T+I G C+ G + A E +++M + +T+ L+ G C+ GD+
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + ++M KG +P+ T LI C + + A + K R+++ + E +Y L
Sbjct: 300 QAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRK-RMIQENIRLDEVAYTAL 358
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I GLC+EG+ +A K+ EM+ G +P Y+ I+ + K+G+V L KEM
Sbjct: 359 ISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEM----- 413
Query: 490 RQEDG 494
Q DG
Sbjct: 414 -QRDG 417
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 80/152 (52%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ + EM+ G +PD +Y+ L+ C+E + A
Sbjct: 278 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAF 337
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ + T+ ++N +
Sbjct: 338 EHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEF 397
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ GDV + +M R G P T VL+
Sbjct: 398 CKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLM 429
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + + + E+
Sbjct: 262 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM------------- 308
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
V ++P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 309 ---SVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRL----DEVAYTALISG 361
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM ++ D Y II FC+ G++ + + +EM G S
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPS 421
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 422 VVTYNVLMNG 431
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 149/272 (54%), Gaps = 3/272 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + ++R ++ P+V TF+AL+ F +EG + E ++ EM + +P
Sbjct: 918 YGRWSDASRLLSDMIER--KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 975
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+YS L+ FC R+ EA++++E M K+ DVV YNT+I GFC+ + E FRE
Sbjct: 976 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 1035
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G+ ++VT+ L+ G +AGD D A ++ +M G P T L+ LC +
Sbjct: 1036 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 1095
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ +A+ + + + + + PT +Y +I+G+C+ GK+E+ + + KG +P + Y+
Sbjct: 1096 LEKAMVVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 1154
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
I G+ ++G+ E A L KEM E+ G
Sbjct: 1155 TMISGFCRKGSKEEADALFKEMKEDGTLPNSG 1186
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 172/343 (50%), Gaps = 30/343 (8%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE------------- 221
++ V +V ++ G + NA+I + + K V ++ ++E
Sbjct: 272 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 331
Query: 222 ---VFGLD-----SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
V GL SDA + +K+ ++ PNV T++AL+ F + G + ++++ EM
Sbjct: 332 TALVNGLCNSSRWSDAARLLSDMIKK--KITPNVITYSALLDAFVKNGKVLEAKELFEEM 389
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
R+ +PD +YS L+ C R+ EA ++++ M K DVV+YNT+I GFC+ +
Sbjct: 390 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 449
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+ FREM G+ S++VT+ L+ G+ +AGDVD A ++ M G P+ T +L
Sbjct: 450 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 509
Query: 394 IGELCDKRRVFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+G LCD + +AL I ++ R + + +Y +I+G+C+ GK+EEA + +
Sbjct: 510 LGGLCDNGELEKALVIFEDMQKREMDLDIV----TYTTVIRGMCKTGKVEEAWSLFCSLS 565
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
KG +P + Y+ + G +G + L +M + + + D
Sbjct: 566 LKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 608
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 122/239 (51%), Gaps = 1/239 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P V +N ++ G + + +++ EM G P+ +YS L++ C R +A
Sbjct: 865 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 924
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L +M ++ + DV ++ +I F + G++ AE+ + EM ++ S VT+ L+NG
Sbjct: 925 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 984
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C +D A ++ M K P+ T LI C +RV E +++ + + + GL
Sbjct: 985 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR-EMSQRGLVG 1043
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y LI+GL + G + A ++ EMV G P++ Y+ +DG K G +E A ++
Sbjct: 1044 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 1102
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 167/362 (46%), Gaps = 11/362 (3%)
Query: 137 NDPKLKLFEVLVKTYRECGSAPFVF-DLLIKCCLEVKNIEKI---ETCVDIVRMLMSRGL 192
+D + L L+K CG AP + D+ C + ++ + +T D L GL
Sbjct: 612 SDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGL 671
Query: 193 S-VKVSTCNALIWEVSRGKGVISGYEIYREVFGLDS----DATAGIGKDVKRVVRVRPNV 247
S +K+ AL E+ + + S E + + + D +G+ ++ + + N
Sbjct: 672 SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL-GIPHNH 730
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
+T++ L+ F R V +M +LG EP+ + S L+ +C +R+ EA L ++
Sbjct: 731 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 790
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M + + V +NT+I G + + A M G + VT+ +VNG C+ GD
Sbjct: 791 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 850
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
D A + N M + EP +I LC + + +AL++ K K G+ P +Y
Sbjct: 851 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK-GIRPNVVTYS 909
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
LI LC G+ +A ++ ++M+ + P + +SA ID ++KEG + A L EM +
Sbjct: 910 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 969
Query: 488 QV 489
+
Sbjct: 970 SI 971
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 128/257 (49%), Gaps = 2/257 (0%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
D +GK ++ V+ +R +++TFN ++ F + +M +LG EPD +
Sbjct: 205 DVVISLGKKME-VLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGS 263
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ FC R+ +A L ++M + + D+VAYN II C+ + A +FF+E+ G
Sbjct: 264 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 323
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ + VT+ LVNG C + A + +DM +K P T L+ +V EA
Sbjct: 324 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 383
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++ + +V+ + P +Y LI GLC +++EA ++ MV KG + Y+ I+G
Sbjct: 384 ELFE-EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 442
Query: 468 YMKEGNVEMATMLRKEM 484
+ K VE L +EM
Sbjct: 443 FCKAKRVEDGMKLFREM 459
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 1/245 (0%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V +PN TFN L+ G + + + M GC+PD +Y V++ C+
Sbjct: 793 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 852
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
A L +M +E V+ YNTII G C+ M A F+EM G+ + VT+ L+
Sbjct: 853 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 912
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+ C G A + +DM + P+ T LI + ++ EA + L +VK +
Sbjct: 913 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA-EKLYDEMVKRSI 971
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P+ +Y LI G C +++EA ++ MV K P + Y+ I G+ K VE
Sbjct: 972 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 1031
Query: 480 LRKEM 484
+ +EM
Sbjct: 1032 VFREM 1036
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 128/273 (46%), Gaps = 21/273 (7%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
D ++FE +V + C ++ LIK + K ++E +++ R + RGL
Sbjct: 992 DEAKQMFEFMVS--KHCFPDVVTYNTLIKGFCKYK---RVEEGMEVFREMSQRGLVGNTV 1046
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T N LI + + EI++E+ SD V PN+ T+N L+ G
Sbjct: 1047 TYNILIQGLFQAGDCDMAQEIFKEMV---SDG-------------VPPNIMTYNTLLDGL 1090
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G EK V+ + R EP Y+Y++++ C+ ++ + L+ + K V+ DV
Sbjct: 1091 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 1150
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
VAYNT+I GFC G A+ F+EM G +S + L+ R GD +++ + +
Sbjct: 1151 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 1210
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
M GF + STI ++ L D R LD+L
Sbjct: 1211 MRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 1243
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 5/223 (2%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
D++ +M + P ++ L++ + ++ L ++M + +D+ +N +I F
Sbjct: 174 DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 233
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C +++ A +M G E VT LVNG+CR V A+ + + M G++P+
Sbjct: 234 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 293
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+I LC +RV +A D K + + G+ P +Y L+ GLC + +A ++ +
Sbjct: 294 VAYNAIIDSLCKTKRVNDAFDFFK-EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 352
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+M+ K P++ YSA +D ++K G V A KE+FE VR
Sbjct: 353 DMIKKKITPNVITYSALLDAFVKNGKVLEA----KELFEEMVR 391
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 129/265 (48%), Gaps = 3/265 (1%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
DA A G+ VK R P++ F+ L+ + F+ V + +M LG + Y+YS+
Sbjct: 678 DAVALFGEMVKS--RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ FC ++ A + +M E ++V ++++ G+C ++ A +M ++G
Sbjct: 736 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ ++VTF L++G A+ + + M KG +P+ T V++ LC + A
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++L ++ + L P Y +I GLC+ M++AL + EM KG P++ YS+ I
Sbjct: 856 NLLN-KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914
Query: 468 YMKEGNVEMATMLRKEMFENQVRQE 492
G A+ L +M E ++ +
Sbjct: 915 LCNYGRWSDASRLLSDMIERKINPD 939
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 198/464 (42%), Gaps = 62/464 (13%)
Query: 43 ATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIAL--GLKNNPHL--ALRFFSFTQHK 98
A + SL R ++ + R G+ P + AL GL N+ A R S K
Sbjct: 298 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 357
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
+ + ++ Y+ ++ + + A+++ +R DP + + L+
Sbjct: 358 KITPNVIT-YSALLDAFVKNGKVLEAKELFEEMVRMSI-DPDIVTYSSLINGL------- 408
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
CL ++I+ + +++S+G V + N LI + K V G ++
Sbjct: 409 ---------CLH----DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 455
Query: 219 YREVF--GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+RE+ GL S N T+N L+ GF++ G +K ++ + +M
Sbjct: 456 FREMSQRGLVS------------------NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF 497
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G PD ++Y++L+ C+ + +A ++E+M+ + ++ D+V Y T+I G C+ G++ A
Sbjct: 498 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 557
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE----V 392
F + L G++ VT+ +++G C G + +Y M ++G T+
Sbjct: 558 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDIT 617
Query: 393 LIGELCDKR----RVFEALDILKARVVKFGL-----FPTEKSYMF---LIKGLCEEGKME 440
L EL K L +K+ V K L F + SY + L + E K++
Sbjct: 618 LSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLD 677
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+A+ + EMV PS+ +S + K ++ L ++M
Sbjct: 678 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM 721
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 172/350 (49%), Gaps = 23/350 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI------WEVSRGK-- 210
+ F +LIK C E IEK D++ L G S V LI E+ + K
Sbjct: 164 YSFGILIKGCCEAGEIEK---SFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220
Query: 211 -------GVISGYEIYREVF-GLDSDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYR 259
G+++ Y + GL + G ++ ++ V PN++T+N +M +
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK 280
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
+G + V+ EM G + +Y+ L+ C E ++ EA K+ ++M+ + +++
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT 340
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YNT+I GFC +G++ +A R++ G+ S VT+ LV+G+CR GD A + +M
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+G +P T +LI + +A+ L+ + + GL P +Y LI G C +G+M
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQ-LRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EA ++ MV K EP+ IY+ I GY KEG+ A L KEM E ++
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 124/252 (49%), Gaps = 7/252 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+V +V++F L+ G G EK D+ +E+ G P+ Y+ L+ C++ + +A
Sbjct: 158 KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ L+ EM + + Y +I G + G + E + +M GV + T+ ++N
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA---LDILKARVVKFG 418
C+ G A V+++M +G T LIG LC + ++ EA +D +K+ G
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD----G 333
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ P +Y LI G C GK+ +AL + ++ +G PSL Y+ + G+ ++G+ A
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA 393
Query: 479 MLRKEMFENQVR 490
+ KEM E ++
Sbjct: 394 KMVKEMEERGIK 405
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 131/292 (44%), Gaps = 41/292 (14%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
++ +Y T+I L R + A V+ ++S +P L + L+ + CG
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVD-QMKSDGINPNLITYNTLIDGF--CG-------- 350
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
+ K+ + + R L SRGLS + T N L+ R KG
Sbjct: 351 ----------VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR-KG------------ 387
Query: 224 GLDSDATAGIGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
T+G K VK + ++P+ T+ L+ F R EK + + M LG PD
Sbjct: 388 -----DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
++YSVL+ FC + +M EA +L++ M +KN E + V YNT+I G+C+ G RA + +
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLK 502
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
EM + + ++ +++ C+ A + M G +P S + ++
Sbjct: 503 EMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+E ++N Y ++ ++ +I +N+M GF P + L+ + +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
K L S+ LIKG CE G++E++ + E+ GF P++ IY+ IDG K+G +
Sbjct: 157 SKVVL--DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 475 EMATMLRKEM 484
E A L EM
Sbjct: 215 EKAKDLFFEM 224
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 207/440 (47%), Gaps = 24/440 (5%)
Query: 53 RSKSRWNHLLS--LCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYAT 110
R K W LS L L +I +G ++P L LRFF+F HS +S+
Sbjct: 50 RGKRSWEIALSSELVSRRLKTIHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCI 109
Query: 111 IIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECG-SAPFVFDLLIKCCL 169
+IH L +A L PA +++ L ++F+ L Y +C S+ FDLLI+ +
Sbjct: 110 LIHALVQANLFWPASSLLQTLLLRALKPS--EVFDALFSCYEKCKLSSSSSFDLLIQHYV 167
Query: 170 EVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDA 229
+ ++ V + +M+M+ KVS L+ EV ++ G +R FGL +
Sbjct: 168 RSR---RVLDGVLVFKMMMT-----KVS----LLPEVRTLSALLHGLVKFRH-FGLAMEL 214
Query: 230 TAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
D V +RP+V+ + ++ + +++ V+M GC+ + Y+VL+
Sbjct: 215 F-----DDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLI 269
Query: 290 AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
C+++++ EA + +++ K ++ DVV Y T++ G C++ E E EM
Sbjct: 270 DGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFS 329
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
S LV G + G V+ A+ + + G P LI LC K R F+ ++
Sbjct: 330 PSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLC-KGRNFDEAEL 388
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
L R+ K GL P + +Y LI C GK++ AL EM+ G +PS+ Y++ I+G+
Sbjct: 389 LFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHC 448
Query: 470 KEGNVEMATMLRKEMFENQV 489
K G++ A L EM ++
Sbjct: 449 KFGDISAAESLMAEMINKKL 468
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 123/243 (50%), Gaps = 3/243 (1%)
Query: 237 VKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
VKRV V PN+ +NAL+ + F++ E ++ M ++G P+ +YS+L+ +FC
Sbjct: 355 VKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCR 414
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
++ A EM D ++ V YN++I G C+ G+++ AE EM +E + VT
Sbjct: 415 RGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVT 474
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ GYC G ++ A+ +Y++M KG P T L+ L + +A+ + +
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLF-TEM 533
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
++ + P +Y +I+G CEEG M +A + EM+ KG P Y I G G
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 475 EMA 477
A
Sbjct: 594 SEA 596
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 158/339 (46%), Gaps = 24/339 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISG------------------YE 217
K+E +++V+ + G+S + NALI + +G+ Y
Sbjct: 347 KVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYS 406
Query: 218 IYREVF---GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
I ++F G A + +G+ + + ++P+V+ +N+L+ G + G E + EM
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMID--MGLKPSVYPYNSLINGHCKFGDISAAESLMAEMI 464
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
EP +Y+ LM +C + ++ +A +L+ EM K + + + T++ G G +
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIR 524
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
A + F EM V+ + VT+ ++ GYC G++ A N+M KG P+ + LI
Sbjct: 525 DAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLI 584
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
LC + EA + + K E Y L+ G C EGK+EEAL V +M +G
Sbjct: 585 HGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGV 643
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+ L Y IDG +K + ++ L KEM + ++ +D
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDD 682
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 168/350 (48%), Gaps = 23/350 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI---------WEVSRG 209
+++ +I+ E+K++ + + +++ + + G V + N LI WE
Sbjct: 228 YIYTGVIRSLCELKDLSRAK---EMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGI 284
Query: 210 KGVISGYEIYREVF-------GLDSDATAGIGKD-VKRVVRVR--PNVHTFNALMVGFYR 259
K ++G E+ +V GL +G + + ++R+R P+ ++L+ G +
Sbjct: 285 KKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRK 344
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G E+ ++ +A G P+ + Y+ L+ C+ R EAE L++ M + + V
Sbjct: 345 RGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVT 404
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
Y+ +I FC G++ A F EM G++ S + L+NG+C+ GD+ +A + +M
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMI 464
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
K EP T L+G C K ++ +AL + K G+ P+ ++ L+ GL G +
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK-GIVPSIYTFTTLLSGLFRAGLI 523
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+A+K+ EM +P+ Y+ I+GY +EGN+ A EM E +
Sbjct: 524 RDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGI 573
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ + +++ + G F++ +W M GC P+ +Y+ ++ C+ + EAE
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCE-IGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L +MR N + V Y + + +G+M +A E + L G+ +++ T+ L+ G
Sbjct: 738 ILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAI-LKGLLANTATYNMLIRG 796
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+CR G ++ A + M G P+ T +I ELC + V +A+++ + K G+ P
Sbjct: 797 FCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEK-GIRP 855
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+Y LI G C G+M +A +++ EM+ +G +P+ E
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTE 893
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 115/247 (46%), Gaps = 9/247 (3%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ GF REG E+ V +M G + D Y VL+ + + + L +EM
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMH 674
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
D+ ++ D V Y ++I + G+ A + M G + VT+ ++NG C+AG V+
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 370 SAILVYNDMCRKGFEPE----GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
A ++ + M P G +++L + D ++ E L ++K GL +
Sbjct: 735 EAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVE----LHNAILK-GLLANTAT 789
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI+G C +G+MEEA ++ M+G G P Y+ I + +V+ A L M
Sbjct: 790 YNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMT 849
Query: 486 ENQVRQE 492
E +R +
Sbjct: 850 EKGIRPD 856
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 230 TAGIGKDVKRVVRVR--------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
T G+G D+K+ V + N T+N L+ GF R+G E+ ++ M G PD
Sbjct: 763 TKGVG-DMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPD 821
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
C +Y+ +++ C +++A +LW M +K + D VAYNT+I G C GEM +A E
Sbjct: 822 CITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRN 881
Query: 342 EMGLSGVESSSVTFEHLVN 360
EM G++ ++ T E ++
Sbjct: 882 EMLRQGLKPNTETSETTIS 900
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 137/392 (34%), Gaps = 112/392 (28%)
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVV------RVRPNVHTFNALMVGFYREGA 262
GKG++ IY L AG+ +D ++ V+PN T+N ++ G+ EG
Sbjct: 500 GKGIVP--SIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGN 557
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
K + EM G PD YSY L+ C + EA+ + + N E + + Y
Sbjct: 558 MSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 323 IIGGFCEIGEMARAEEFFREMGLS-----------------------------------G 347
++ GFC G++ A ++MGL G
Sbjct: 618 LLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRG 677
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA- 406
++ V + +++ + GD A +++ M +G P T +I LC V EA
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 407 ---------------------LDILKARV------------VKFGLFPTEKSYMFLIKGL 433
LDIL V + GL +Y LI+G
Sbjct: 738 ILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 434 CEEGKMEEALKVQAEMVG-----------------------------------KGFEPSL 458
C +G+MEEA ++ M+G KG P
Sbjct: 798 CRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
Y+ I G G + AT LR EM ++
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLK 889
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV-RVRPNVHTFNALMVGFYREG 261
IW++ +G + Y V ++ AG + + + ++RP N + G + +
Sbjct: 704 IWDLMINEGCVPNEVTYTAV--INGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDI 761
Query: 262 AFEKVEDV--WVEMARL---GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
+ V D+ VE+ G + +Y++L+ FC + RM EA +L M V D
Sbjct: 762 LTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPD 821
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
+ Y T+I C ++ +A E + M G+ V + L++G C AG++ A + N
Sbjct: 822 CITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRN 881
Query: 377 DMCRKGFEPEGSTIEVLI 394
+M R+G +P T E I
Sbjct: 882 EMLRQGLKPNTETSETTI 899
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRK-GFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
F+ L+ Y R+ V +LV+ M K PE T+ L+ L R A+++
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFD-D 217
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
++ G+ P Y +I+ LCE + A ++ +M G + ++ Y+ IDG K+
Sbjct: 218 MINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 474 VEMATMLRKEMFENQVRQE 492
V A ++K++ +++ +
Sbjct: 278 VWEAVGIKKDLAGKELKPD 296
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 149/272 (54%), Gaps = 3/272 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + ++R ++ P+V TF+AL+ F +EG + E ++ EM + +P
Sbjct: 304 YGRWSDASRLLSDMIER--KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+YS L+ FC R+ EA++++E M K+ DVV YNT+I GFC+ + E FRE
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G+ ++VT+ L+ G +AGD D A ++ +M G P T L+ LC +
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ +A+ + + + + + PT +Y +I+G+C+ GK+E+ + + KG +P + Y+
Sbjct: 482 LEKAMVVFE-YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
I G+ ++G+ E A L KEM E+ G
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 122/239 (51%), Gaps = 1/239 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P V +N ++ G + + +++ EM G P+ +YS L++ C R +A
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L +M ++ + DV ++ +I F + G++ AE+ + EM ++ S VT+ L+NG
Sbjct: 311 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C +D A ++ M K P+ T LI C +RV E +++ + + + GL
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR-EMSQRGLVG 429
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y LI+GL + G + A ++ EMV G P++ Y+ +DG K G +E A ++
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 148/317 (46%), Gaps = 7/317 (2%)
Query: 178 ETCVDIVRMLMSRGLS-VKVSTCNALIWEVSRGKGVISGYEIYREVFGLDS----DATAG 232
+T D L GLS +K+ AL E+ + + S E + + + D
Sbjct: 43 KTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVIS 102
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+G+ ++ + + N +T++ L+ F R V +M +LG EP+ + S L+ +
Sbjct: 103 LGEQMQNL-GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGY 161
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C +R+ EA L ++M + + V +NT+I G + + A M G +
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ +VNG C+ GD D A + N M + EP +I LC + + +AL++ K
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
K G+ P +Y LI LC G+ +A ++ ++M+ + P + +SA ID ++KEG
Sbjct: 282 METK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Query: 473 NVEMATMLRKEMFENQV 489
+ A L EM + +
Sbjct: 341 KLVEAEKLYDEMVKRSI 357
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 1/245 (0%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V +PN TFN L+ G + + + M GC+PD +Y V++ C+
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
A L +M +E V+ YNTII G C+ M A F+EM G+ + VT+ L+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+ C G A + +DM + P+ T LI + ++ EA + L +VK +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA-EKLYDEMVKRSI 357
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P+ +Y LI G C +++EA ++ MV K P + Y+ I G+ K VE
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 480 LRKEM 484
+ +EM
Sbjct: 418 VFREM 422
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 148/315 (46%), Gaps = 13/315 (4%)
Query: 185 RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF---GLD----SDATAGIGKDV 237
R L+ RG + VS + W R + Y+ YRE GL DA A G+ V
Sbjct: 17 RSLVVRGNAATVSPSFSFFWR--RAFSGKTSYD-YREKLSRNGLSELKLDDAVALFGEMV 73
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
K R P++ F+ L+ + F+ V + +M LG + Y+YS+L+ FC +
Sbjct: 74 KS--RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQ 131
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A + +M E ++V ++++ G+C ++ A +M ++G + ++VTF
Sbjct: 132 LPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 191
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++G A+ + + M KG +P+ T V++ LC + A ++L ++ +
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN-KMEQG 250
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
L P Y +I GLC+ M++AL + EM KG P++ YS+ I G A
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310
Query: 478 TMLRKEMFENQVRQE 492
+ L +M E ++ +
Sbjct: 311 SRLLSDMIERKINPD 325
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 128/273 (46%), Gaps = 21/273 (7%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
D ++FE +V + C ++ LIK + K ++E +++ R + RGL
Sbjct: 378 DEAKQMFEFMVS--KHCFPDVVTYNTLIKGFCKYK---RVEEGMEVFREMSQRGLVGNTV 432
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T N LI + + EI++E+ SD V PN+ T+N L+ G
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMV---SDG-------------VPPNIMTYNTLLDGL 476
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G EK V+ + R EP Y+Y++++ C+ ++ + L+ + K V+ DV
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
VAYNT+I GFC G A+ F+EM G +S + L+ R GD +++ + +
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
M GF + STI ++ L D R LD+L
Sbjct: 597 MRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 629
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 196/443 (44%), Gaps = 27/443 (6%)
Query: 51 HHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQH-KSLCKHSLSSYA 109
HH + S +N S L P + L++NP ALRFF + ++ LC H + S+
Sbjct: 38 HHNNFSFFN---SGSLPNLQPAHLEPVVFQLRSNPTSALRFFEWAENFLGLC-HPVQSFC 93
Query: 110 TIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP-FVFDLLIKCC 168
I H+L R R+ PA RV R L++ ++R GS P V+ L+ C
Sbjct: 94 GIAHVLLRHRMFDPAT---RVFDRMVGQFGNLEVLGEFHGSFRNYGSNPSTVYSFLLHCY 150
Query: 169 LEVKNIEKIETCVDIVRMLMSRGLSVK---VSTCNALIWEVSRGKGVISGYE-------I 218
+++ VD + G+S+ S L+ + R ++ YE +
Sbjct: 151 CRNGMVDR---AVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGV 207
Query: 219 YREVFG-LDSDATAGIGKDVKRVVRVR---PNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
Y VF G + R + R P + N ++ G D + M
Sbjct: 208 YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMV 267
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
R G P+ ++S L+ V+C+E R+ EA L+ M +K + D+V Y+ +I G G++
Sbjct: 268 RSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLE 327
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
F GV+ V F +++ Y R GD+ AI VY M ++G P T +LI
Sbjct: 328 EGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILI 387
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
LC RV EA + +++K GL P+ +Y LI G C+ + + + M+ KG
Sbjct: 388 NGLCRNGRVLEACGVF-GQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGH 446
Query: 455 EPSLEIYSAFIDGYMKEGNVEMA 477
P + + S I+G ++G ++ A
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEA 469
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 144/339 (42%), Gaps = 52/339 (15%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
RGL++ NALI R K G ++Y + + +V P+V T
Sbjct: 479 RGLTLNNYLFNALIDGCFRLKRTRDGLKMYI----------------LMGMYKVIPDVVT 522
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ G +G ++ ++ ++ + G PD Y L+ FC++R ++++ M+
Sbjct: 523 YTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQ 582
Query: 310 DKNV-----------------------------------EHDVVAYNTIIGGFCEIGEMA 334
+ E D+V YNT+I G+C + +
Sbjct: 583 SNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFS 642
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
+A + F + + +++TF L++ YC+ G +D A+L+++ M +G EP T LI
Sbjct: 643 KAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLI 702
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
A + L +++ + P SY LI GLC++G MEEA +G+
Sbjct: 703 DGYFKTENTESAFE-LYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHL 761
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
P + Y I GY K G + A ML M N + +D
Sbjct: 762 LPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDD 800
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 165/404 (40%), Gaps = 60/404 (14%)
Query: 111 IIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY---RECGSAPFVFDLLIKC 167
I+ L IG A D + +RS + P L F L+ Y A +++L+I
Sbjct: 246 ILKGLCMGNQIGVASDFFDMMVRSGPS-PNLVTFSTLINVYCKELRLDEAFSLYNLMI-- 302
Query: 168 CLEVKNIEKIETCVDIVRMLMSRGL--SVKVSTCNALIWEVSRGKGVISGYEIYREVFGL 225
EK ++ ++ GL + K+ N+L + ++ +GV I+ + +
Sbjct: 303 -------EKGIVPDLVIYSILINGLFRAGKLEEGNSL-FSMALARGVKMDVVIFSSI--M 352
Query: 226 DSDATAG-IGKDVKRVVR-----VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
D+ G +GK ++ R + PNV T++ L+ G R G + V+ ++ + G E
Sbjct: 353 DAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLE 412
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P +YS L+ FC+ +R+ L+ M K DVV + +I G G M A F
Sbjct: 413 PSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRF 472
Query: 340 FRE-----------------------------------MGLSGVESSSVTFEHLVNGYCR 364
F + MG+ V VT+ LV G
Sbjct: 473 FFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAE 532
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +D A+ ++ + +KGF P+ LI C KR L I K G+FP
Sbjct: 533 QGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSN-GIFPDIC 591
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
Y LI EG +E L++ E++ G EP + Y+ I GY
Sbjct: 592 IYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGY 635
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 10/239 (4%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++ L+ + R G ++ D + M+++G Y+ S ++ + + R+ + +EEM
Sbjct: 142 VYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM 201
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ Y + F + GE+ + F R + G+ V ++ G C +
Sbjct: 202 C-----KGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQI 256
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A ++ M R G P T LI C + R+ EA + + K G+ P Y
Sbjct: 257 GVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEK-GIVPDLVIYSI 315
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN----VEMATMLRKE 483
LI GL GK+EE + + + +G + + I+S+ +D Y++ G+ +E+ T + KE
Sbjct: 316 LINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE 374
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 141 LKLFEVLVKTYRECGSA---PFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKV 196
+KLFEVL +CG F +LI C + +++ + I ++ RG +
Sbjct: 645 IKLFEVL-----KCGRTQPNAITFTILIDAYCKD----GRMDDAMLIFSSMLERGPEPNI 695
Query: 197 STCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVG 256
T + LI + + S +E+Y ++ G RV PN+ +++ L+ G
Sbjct: 696 LTYSCLIDGYFKTENTESAFELYEKMLG----------------DRVSPNIVSYSILIDG 739
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
++G E+ + PD +Y +L+ +C+ R+ EA L++ M + D
Sbjct: 740 LCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
Y+ ++ +C G + RA + F M GV S +++ + +D + Y +MC
Sbjct: 143 YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMC 202
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG E + + V + L+ +A +V+ GL P ++KGLC ++
Sbjct: 203 -KGL----GVYEFVFNSFLKRGEVEKGLNFHRA-LVERGLVPKIVDCNKILKGLCMGNQI 256
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
A MV G P+L +S I+ Y KE ++ A L M E +
Sbjct: 257 GVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGI 306
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 202/459 (44%), Gaps = 51/459 (11%)
Query: 35 SDQSHNLIATVVSLLTHHRSKSRWN-----HLLSLCRSGLTPTQFSQIALGLKNNPHLAL 89
+ H L+ + L+ +S WN L L RS L P Q + L L+ + +AL
Sbjct: 64 DESRHPLVREICRLI---ELRSAWNPKLEGELRHLLRS-LKPRQVCAV-LQLQTDERVAL 118
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRV-ALRSPENDPKLKLFEVLV 148
RFF + + +H Y ++ ILS+ +L A+ V+R+ A R E P+ F ++
Sbjct: 119 RFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEA--FGYVM 176
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+Y G K+ + ++ M+ G+ +S CN I +
Sbjct: 177 VSYSRAG--------------------KLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVM 216
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVED 268
G + + ++V + PNV T+N L+ G+ E +
Sbjct: 217 GNRLDKAVRFLERM----------------QIVEIEPNVITYNCLIKGYCDLHRLEDAME 260
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM-RDKNVEHDVVAYNTIIGGF 327
+ EM GC PD SY +M C+E+R++E L E+M +D N+ D V YNT +
Sbjct: 261 LIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHML 320
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
+ G A EF RE V + +V+ +CR G +D A + N+M KG P+
Sbjct: 321 SKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDV 380
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T +I LC +R+V +A +L+ ++ K G P SY L+ GLC+ G EA ++
Sbjct: 381 VTYTSVINGLCQERKVDQAKKMLR-QMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMN 439
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ P+ YS + G+ +EG A L +EM +
Sbjct: 440 MSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIK 478
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 122/244 (50%), Gaps = 1/244 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R R + ++A++ F REG +K +++ EM GC PD +Y+ ++ C+ER++ +A
Sbjct: 340 RFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQA 399
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+K+ +M + + V+Y ++ G C+ G A E +++T+ L++G
Sbjct: 400 KKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHG 459
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ R G A + +M +KGF P I +LI LC + +V EA ++ + + G
Sbjct: 460 FRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFME-QCLNNGCAV 518
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
++ +I G C++ +E AL + +M P + Y+ ID K+G +E AT L
Sbjct: 519 NVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLA 578
Query: 482 KEMF 485
+M
Sbjct: 579 MKML 582
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 16/258 (6%)
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
KR + RP F +MV + R G V M + G EPD + + V
Sbjct: 161 AKRRIERRP--EAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGN 218
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
R+ +A + E M+ +E +V+ YN +I G+C++ + A E EM G +++
Sbjct: 219 RLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYY 278
Query: 357 HLVNGYCRAGDVDSAILVYNDMCR-KGFEPEGSTIEVLIGELCDKRRVFEALDILKA--- 412
++ C+ + L+ M + P+ T + L EAL+ L+
Sbjct: 279 TVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEE 338
Query: 413 ---RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
RV K G Y ++ C EG+M++A ++ EM KG P + Y++ I+G
Sbjct: 339 RRFRVDKVG-------YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLC 391
Query: 470 KEGNVEMATMLRKEMFEN 487
+E V+ A + ++M+++
Sbjct: 392 QERKVDQAKKMLRQMYKH 409
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 3/245 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T++ LM GF REG + D+ EM + G P ++L+ C+E ++ EA++
Sbjct: 448 PNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRF 507
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+ + +VV + T+I GFC+ ++ A +M LS VT+ +++ +
Sbjct: 508 MEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGK 567
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G ++ A + M R G P T +I + C RV + L +L+ + +
Sbjct: 568 KGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR---QECRT 624
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I+ LC G +E+A K+ +++ + I+ Y+ +G M+ + M
Sbjct: 625 AYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRM 684
Query: 485 FENQV 489
F +
Sbjct: 685 FNRNL 689
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 197/427 (46%), Gaps = 52/427 (12%)
Query: 91 FFSFTQHKSLCKHSLSSYATIIHILSRARLIGPAR----DVIRVALRSPENDPKLKLFEV 146
F S ++ L K+ Y+ IIH+L+ A+L AR D+I+ +S + +F V
Sbjct: 57 FHSVSRRADLAKNP-QLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCSVFNV 115
Query: 147 LVKTYRECGSAPFVFDLLIKCCLEVKNIE-----------------------------KI 177
L + P VF +LI E+ +E +
Sbjct: 116 LSR-LESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRF 174
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
+T + +++RG S V T LI R + + ++ E+ I K
Sbjct: 175 DTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEM----------IEK-- 222
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
++ P V + L+ G E + E ++ M G P+ Y+Y+ +M +C+
Sbjct: 223 ----KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAH 278
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+++A +L+ EM + +VV + +I G C+ EM A +F +M GV + +
Sbjct: 279 VKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++GYC+AG++ A+ +++++ + P+ T +LI LC R+ EA D L + K
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA-DGLLQEMKKK 397
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P +Y LI G C+EG ME+A++V ++M KG EP++ +S IDGY K G +E A
Sbjct: 398 GFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAA 457
Query: 478 TMLRKEM 484
L EM
Sbjct: 458 MGLYTEM 464
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 177/379 (46%), Gaps = 35/379 (9%)
Query: 121 IGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIE 178
I P + + +R + ++ E + +T R G P + ++ ++ ++ +++K
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK-- 281
Query: 179 TCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK 238
+++ ++ GL V T LI + + ++S + F +D A G
Sbjct: 282 -ALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARK-----FLID---MASFG---- 328
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
V PN+ +N L+ G+ + G + + E+ + PD ++YS+L+ C RM
Sbjct: 329 ----VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EA+ L +EM+ K + V YNT+I G+C+ G M +A E +M G+E + +TF L
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++GYC+AG +++A+ +Y +M KG P+ LI EA + K + + G
Sbjct: 445 IDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHK-EMQEAG 503
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF-------------EPSLEIYSAFI 465
L P + LI GLC++G++ +A+K+ G P+ +Y+A I
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563
Query: 466 DGYMKEGNVEMATMLRKEM 484
G +G + A+ +M
Sbjct: 564 QGLCTDGRIFKASKFFSDM 582
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 110/259 (42%), Gaps = 51/259 (19%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N L+ G+ +EG EK +V +M G EP+ ++S L+ +C+ +M A L
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM K + DVVAY +I G + G A +EM +G+ + T L++G C+
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520
Query: 365 AGDVDSAILVY-------------NDMCRKGFEPEGSTIEVLIGELCDKRRVFEA----- 406
G + AI ++ N++ R P LI LC R+F+A
Sbjct: 521 DGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFS 580
Query: 407 -----------------------------LDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
+ +L+A ++K G+ P Y L KG E G
Sbjct: 581 DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESG 640
Query: 438 KMEEALKVQAEMVGKGFEP 456
++ AL G+G +P
Sbjct: 641 YLKSAL----SFCGEGVQP 655
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 231 AGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
A +G + V++ + P+V + AL+ G +++G ++ + EM G P+ ++ S L+
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515
Query: 290 AVFCEERRMREAEKLW-------------EEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
C++ R+ +A KL+ E+ + V Y +I G C G + +A
Sbjct: 516 DGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKA 575
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+FF +M SG+ T ++ G+ RA + +++ D+ + G P S VL
Sbjct: 576 SKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVL 632
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K + P ++ ++ GL ++G+ + KV +MV +G P++ Y IDG ++G+
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 476 MATMLRKEMFENQV 489
A L EM E ++
Sbjct: 211 KAFRLFDEMIEKKI 224
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 199/428 (46%), Gaps = 28/428 (6%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI 128
L P ++ L NNPH+ RF+ F++ K +HS +Y + L +A L A +
Sbjct: 67 LNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMF 126
Query: 129 RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK------CCLEVKNIEKIETCVD 182
++S P +L LV ++ E G F LL++ CC+ V ++ + T V
Sbjct: 127 E-CMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSL--LNTLVK 183
Query: 183 IVRMLMSRGL---SVKVSTCN--ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
+ R+ + L ++ +CN + RG + E E+ G+ S G G
Sbjct: 184 LDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS----GFG--- 236
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEER 296
P++ T+N L+ GF + K +++ ++ C PD +Y+ +++ +C+
Sbjct: 237 -----CEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+MREA L ++M + V +N ++ G+ + GEM AEE +M G VTF
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L++GYCR G V ++ +M +G P T +LI LC++ R+ +A ++L K
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
+ P Y +I G C+ GK+ EA + EM K +P ++ I G+ +G +
Sbjct: 412 -DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 477 ATMLRKEM 484
A + +M
Sbjct: 471 AVSIFHKM 478
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 8/194 (4%)
Query: 303 KLWEEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ WE R K N+ H YN + C+ G A + F M GV ++ LV+
Sbjct: 88 RFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS 147
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEV--LIGELCDKRRVFEALDILKARVVKFGL 419
+ G + A + + FE EG + V L+ L RV +A+ + + +F
Sbjct: 148 FAEKGKLHFA----TALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHL-RFQS 202
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
K++ LI+GLC GK E+AL++ M G G EP + Y+ I G+ K + A+
Sbjct: 203 CNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE 262
Query: 480 LRKEMFENQVRQED 493
+ K++ V D
Sbjct: 263 MFKDVKSGSVCSPD 276
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 138/248 (55%), Gaps = 2/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V TF +L+ R G E+ + +M G + ++++ L+ FC + +A
Sbjct: 291 VVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDAL 350
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+EMR+ ++ VV YN +I G+C++G M A E EM G++ VT+ +++GY
Sbjct: 351 LAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGY 410
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ GD DSA + M +KG P+ T LI LC++RR+ +A ++ + ++++ GL P
Sbjct: 411 CKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFE-KMLQLGLQPD 469
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT-MLR 481
E +Y LI G C+EG +++AL + EM+ KG P + YS IDG K + A +L
Sbjct: 470 EFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLF 529
Query: 482 KEMFENQV 489
K +E+ V
Sbjct: 530 KLYYEDPV 537
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 139/291 (47%), Gaps = 42/291 (14%)
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
V R VRP++ TFN ++ G + G E ++ EMAR G PD SY+ L++ +C+
Sbjct: 215 VMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAG 274
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ EA ++ EM K V DVV + ++I C G + RA +M G+ + TF
Sbjct: 275 CLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFT 334
Query: 357 HLVNGYCRAGDVDSAILVYNDM--CR---------------------------------K 381
L++G+CR G +D A+L +M CR K
Sbjct: 335 ALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAK 394
Query: 382 GFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
G +P+ T ++ C D FE L +++K G+ P +Y LI+GLCEE +
Sbjct: 395 GMKPDVVTYSTILSGYCKIGDTDSAFE----LNRKMLKKGVVPDAITYSSLIRGLCEERR 450
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ +A ++ +M+ G +P Y+ IDG+ KEGNV+ A L EM + V
Sbjct: 451 LGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGV 501
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 131/258 (50%), Gaps = 1/258 (0%)
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
G+ D R PNV T+N L+ F R G + E + M G P +++ ++
Sbjct: 175 GVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNG 234
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+ RM +A K+++EM + + D V+YNT++ G+C+ G + A F EM GV
Sbjct: 235 LCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
VTF L++ CRAG+++ A+ + M +G T LI C + +AL +K
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMK 354
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ + + P+ Y LI G C+ G+M+EA ++ EM KG +P + YS + GY K
Sbjct: 355 -EMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413
Query: 472 GNVEMATMLRKEMFENQV 489
G+ + A L ++M + V
Sbjct: 414 GDTDSAFELNRKMLKKGV 431
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 129/247 (52%), Gaps = 3/247 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ +NA+++ + + + M R G P+ Y+Y++L+ C + EA +
Sbjct: 118 PSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176
Query: 305 -WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++MR +VV YNT++ FC GE+ AE M GV S VTF +VNG C
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+AG ++ A ++++M R+G P+G + L+ C + EAL + A + + G+ P
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVF-AEMAQKGVVPDV 295
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++ LI +C G +E A+ + +M +G + ++A IDG+ + G ++ A + KE
Sbjct: 296 VTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKE 355
Query: 484 MFENQVR 490
M E +++
Sbjct: 356 MRECRIQ 362
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 155/340 (45%), Gaps = 33/340 (9%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
F LI N+E+ V +V + RGL + T ALI R
Sbjct: 297 TFTSLIHAMCRAGNLER---AVALVGQMRERGLRMNEFTFTALIDGFCRN---------- 343
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
G DA + + R R++P+V +N L+ G+ + G ++ ++ EM G +
Sbjct: 344 ----GFLDDALLAMKE--MRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMK 397
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +YS +++ +C+ A +L +M K V D + Y+++I G CE + A E
Sbjct: 398 PDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACEL 457
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F +M G++ T+ L++G+C+ G+V A+ ++++M +KG P+ T VLI L
Sbjct: 458 FEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSK 517
Query: 400 KRRVFEAL-------------DILKARVVKFGLFPTE-KSYMFLIKGLCEEGKMEEALKV 445
R EA D +K + E KS + L+KG +G M +A KV
Sbjct: 518 SARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKV 577
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
M+ + ++ +YS I G+ + GN+ A K++
Sbjct: 578 YQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLL 617
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 51/280 (18%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+V T++ ++ G+ + G + ++ +M + G PD +YS L+ CEERR+ +A
Sbjct: 396 MKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDAC 455
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+E+M ++ D Y T+I G C+ G + +A EM GV VT+ L++G
Sbjct: 456 ELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGL 515
Query: 363 ----------------------------------CRAGDVDSAIL--------------- 373
CR + S +
Sbjct: 516 SKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQAD 575
Query: 374 -VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
VY M + ++ +GS VLI C + +AL K ++++ G P S + L++G
Sbjct: 576 KVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHK-QLLRCGFSPNSTSTISLVRG 634
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
L EEG EA V E++ E A ID KEG
Sbjct: 635 LFEEGMTVEADNVIQELLNCCSLADAETSKALIDLNRKEG 674
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 195/416 (46%), Gaps = 31/416 (7%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L ++I A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMIAEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDI 66
Query: 159 FVFDLLIKC------------CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
+VF LI C + K D R ++ + +K L+W
Sbjct: 67 YVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYF---KLVWGF 123
Query: 207 SRGKGVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFY 258
+ + GY F + + G+ D +RP+V +FN LM G+
Sbjct: 124 YE-ESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM + + + V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGV 242
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
KG +P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGHLETAFEYRK-RMIKENIRLDDVAYTALISGLCQEGR 361
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM+ G +PD +Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + + +M R G+ P
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYVP 414
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ E+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM------------- 302
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ ++P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 303 ---SMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 199/428 (46%), Gaps = 28/428 (6%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI 128
L P ++ L NNPH+ RF+ F++ K +HS +Y + L +A L A +
Sbjct: 67 LNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMF 126
Query: 129 RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK------CCLEVKNIEKIETCVD 182
++S P +L LV ++ E G F LL++ CC+ V ++ + T V
Sbjct: 127 E-CMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSL--LNTLVK 183
Query: 183 IVRMLMSRGL---SVKVSTCN--ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
+ R+ + L ++ +CN + RG + E E+ G+ S G G
Sbjct: 184 LDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS----GFG--- 236
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEER 296
P++ T+N L+ GF + K +++ ++ C PD +Y+ +++ +C+
Sbjct: 237 -----CEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+MREA L ++M + V +N ++ G+ + GEM AEE +M G VTF
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L++GYCR G V ++ +M +G P T +LI LC++ R+ +A ++L K
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
+ P Y +I G C+ GK+ EA + EM K +P ++ I G+ +G +
Sbjct: 412 -DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 477 ATMLRKEM 484
A + +M
Sbjct: 471 AVSIFHKM 478
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 8/194 (4%)
Query: 303 KLWEEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ WE R K N+ H YN + C+ G A + F M GV ++ LV+
Sbjct: 88 RFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS 147
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEV--LIGELCDKRRVFEALDILKARVVKFGL 419
+ G + A + + FE EG + V L+ L RV +A+ + + +F
Sbjct: 148 FAEKGKLHFA----TALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHL-RFQS 202
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
K++ LI+GLC GK E+AL++ M G G EP + Y+ I G+ K + A+
Sbjct: 203 CNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE 262
Query: 480 LRKEMFENQVRQED 493
+ K++ V D
Sbjct: 263 MFKDVKSGSVCSPD 276
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 194/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L ++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMRPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM D + + V
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM+ G +PD +Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + + +M R G+ P
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYMP 414
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ +D + G+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 196/443 (44%), Gaps = 27/443 (6%)
Query: 51 HHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQH-KSLCKHSLSSYA 109
HH + S +N S L P + L++NP ALRFF + ++ LC H + S+
Sbjct: 38 HHNNFSFFN---SGSLPNLQPAHLEPVVFQLRSNPTSALRFFEWAENFLGLC-HPVQSFC 93
Query: 110 TIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP-FVFDLLIKCC 168
I H+L R R+ PA RV R L++ ++R GS P V+ L+ C
Sbjct: 94 GIAHVLLRHRMFDPAT---RVFDRMVGQFGNLEVLGEFHGSFRNYGSNPSTVYSFLLHCY 150
Query: 169 LEVKNIEKIETCVDIVRMLMSRGLSVK---VSTCNALIWEVSRGKGVISGYE-------I 218
+++ VD + G+S+ S L+ + R ++ YE +
Sbjct: 151 CRNGMVDR---AVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGV 207
Query: 219 YREVFG-LDSDATAGIGKDVKRVVRVR---PNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
Y VF G + R + R P + N ++ G D + M
Sbjct: 208 YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMV 267
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
R G P+ ++S L+ V+C+E R+ EA L+ M +K + D+V Y+ +I G G++
Sbjct: 268 RSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLE 327
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
F GV+ V F +++ Y R GD+ AI VY M ++G P T +LI
Sbjct: 328 EGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILI 387
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
LC RV EA + +++K GL P+ +Y LI G C+ + + + M+ KG
Sbjct: 388 NGLCRNGRVLEACGVF-GQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGH 446
Query: 455 EPSLEIYSAFIDGYMKEGNVEMA 477
P + + S I+G ++G ++ A
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEA 469
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 144/339 (42%), Gaps = 52/339 (15%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
RGL++ NALI R K G ++Y + + +V P+V T
Sbjct: 479 RGLTLNNYLFNALIDGCFRLKRTRDGLKMYI----------------LMGMYKVIPDVVT 522
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ G +G ++ ++ ++ + G PD Y L+ FC++R ++++ M+
Sbjct: 523 YTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQ 582
Query: 310 DKNV-----------------------------------EHDVVAYNTIIGGFCEIGEMA 334
+ E D+V YNT+I G+C + +
Sbjct: 583 SNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFS 642
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
+A + F + + +++TF L++ YC+ G +D A+L+++ M +G EP T LI
Sbjct: 643 KAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLI 702
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
A + L +++ + P SY LI GLC++G MEEA +G+
Sbjct: 703 DGYFKTENTESAFE-LYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHL 761
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
P + Y I GY K G + A ML M N + +D
Sbjct: 762 LPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDD 800
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 165/404 (40%), Gaps = 60/404 (14%)
Query: 111 IIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY---RECGSAPFVFDLLIKC 167
I+ L IG A D + +RS + P L F L+ Y A +++L+I
Sbjct: 246 ILKGLCMGNQIGVASDFFDMMVRSGPS-PNLVTFSTLINVYCKELRLDEAFSLYNLMI-- 302
Query: 168 CLEVKNIEKIETCVDIVRMLMSRGL--SVKVSTCNALIWEVSRGKGVISGYEIYREVFGL 225
EK ++ ++ GL + K+ N+L + ++ +GV I+ + +
Sbjct: 303 -------EKGIVPDLVIYSILINGLFRAGKLEEGNSL-FSMALARGVKMDVVIFSSI--M 352
Query: 226 DSDATAG-IGKDVKRVVR-----VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
D+ G +GK ++ R + PNV T++ L+ G R G + V+ ++ + G E
Sbjct: 353 DAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLE 412
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P +YS L+ FC+ +R+ L+ M K DVV + +I G G M A F
Sbjct: 413 PSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRF 472
Query: 340 FRE-----------------------------------MGLSGVESSSVTFEHLVNGYCR 364
F + MG+ V VT+ LV G
Sbjct: 473 FFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAE 532
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +D A+ ++ + +KGF P+ LI C KR L I K G+FP
Sbjct: 533 QGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSN-GIFPDIC 591
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
Y LI EG +E L++ E++ G EP + Y+ I GY
Sbjct: 592 IYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGY 635
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 10/239 (4%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++ L+ + R G ++ D + M+++G Y+ S ++ + + R+ + +EEM
Sbjct: 142 VYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM 201
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ Y + F + GE+ + F R + G+ V ++ G C +
Sbjct: 202 C-----KGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQI 256
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A ++ M R G P T LI C + R+ EA + + K G+ P Y
Sbjct: 257 GVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEK-GIVPDLVIYSI 315
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN----VEMATMLRKE 483
LI GL GK+EE + + + +G + + I+S+ +D Y++ G+ +E+ T + KE
Sbjct: 316 LINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE 374
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 6/171 (3%)
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
Y+ ++ +C G + RA + F M GV S +++ + +D + Y +M
Sbjct: 142 VYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM 201
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
C KG E + + V + L+ +A +V+ GL P ++KGLC +
Sbjct: 202 C-KGL----GVYEFVFNSFLKRGEVEKGLNFHRA-LVERGLVPKIVDCNKILKGLCMGNQ 255
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ A MV G P+L +S I+ Y KE ++ A L M E +
Sbjct: 256 IGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGI 306
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 141 LKLFEVLVKTYRECGSA---PFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKV 196
+KLFEVL +CG F +LI C + +++ + I ++ RG +
Sbjct: 645 IKLFEVL-----KCGRTQPNAITFTILIDAYCKD----GRMDDAMLIFSSMLERGPEPNI 695
Query: 197 STCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVG 256
T + LI + + S +E+Y ++ G RV PN+ +++ L+ G
Sbjct: 696 LTYSCLIDGYFKTENTESAFELYEKMLG----------------DRVSPNIVSYSILIDG 739
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
++G E+ + PD +Y +L+ +C+ R+ EA L++ M + D
Sbjct: 740 LCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 192/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L ++ A+ +I+V + +F +++T S
Sbjct: 7 STFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIIETKGNQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+VF LI LE + C + R V TC ++ + + K +
Sbjct: 67 YVFSGLITAYLESGFLRDAVECYRLTR---EHKFWVPFDTCKKMLEHLVKLKYFNLVWAF 123
Query: 219 YREVFGLDSDATAGIGK----------DVKRVVRV---------RPNVHTFNALMVGFYR 259
Y E+ A+ D++ V RP+V ++N LM G+ R
Sbjct: 124 YEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIR 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G + + M G +PD Y+YSVL+ C+E +M +A +L+EEM K + + V
Sbjct: 184 LGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ G ++ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R+++ + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGCCKEGDLDTAFEHRK-RMIQENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM------QRDG 411
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 76/141 (53%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++GA + D+ EM+ G +PD +Y+ L+ C+E + A +
Sbjct: 274 PDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEH 333
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C+ G AE+ REM G++ + T+ ++N +C+
Sbjct: 334 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCK 393
Query: 365 AGDVDSAILVYNDMCRKGFEP 385
GDV + +M R G P
Sbjct: 394 KGDVWKGSKLLKEMQRDGHAP 414
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 87/183 (47%), Gaps = 24/183 (13%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ +++ + ++S+ L + T N LI+ + + + +++ +D + G+
Sbjct: 256 RVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDL------MDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 308 --------KPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL----DDVAYTALISG 355
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM ++ D Y II FC+ G++ + + +EM G S
Sbjct: 356 LCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPS 415
Query: 352 SVT 354
VT
Sbjct: 416 VVT 418
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 217/487 (44%), Gaps = 75/487 (15%)
Query: 39 HNLIATVVSLLTHHRSKSRWNHLL--SLCRSGLTPTQFSQIALGLK---NNPHLALRFFS 93
N+ ATV+ K WN+LL +C S LT + Q+ L P L+ F
Sbjct: 15 QNICATVI--------KGGWNNLLRPKIC-SILTASTLHQVLYQLSLHSQGPCLSWALFK 65
Query: 94 FTQHK-SLCKHSLSSYATIIHILSRARLIGPARDVI-RVALRSPENDPKLKLFEVLVKTY 151
+ + KHSL S T+IHIL++ + + A+ ++ ++A R + + LV+ +
Sbjct: 66 WIESSIPNYKHSLQSSWTMIHILTKFKHLKTAQSLLEKIAYRDFLSTQSV--LSALVRLH 123
Query: 152 RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
+ VF L+ + N + + + + +M G + C L+ +++ +
Sbjct: 124 DDPDINSHVFSWLV---IVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRL 180
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
+++Y+++ A IG V N+H +N L+ + G EK +++
Sbjct: 181 TDMVWKVYKKM--------ARIG--------VEANIHVYNVLIHACCKSGDVEKADNLLS 224
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM PD ++Y+ L++++C++ EA + + M + ++ D+V YN++I GFC+ G
Sbjct: 225 EMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEG 284
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA---------------ILVY- 375
M A F+E + + VT+ L++GYCR D+D A ++ Y
Sbjct: 285 RMREAMRLFKE--IRDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYN 342
Query: 376 -------------------NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
N+M K EP+ T LI C + AL + K R+V+
Sbjct: 343 SILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKV-KNRMVE 401
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
GL + +Y LI G C+ +M+ A ++ M+ GF PS YS +DGY + N E
Sbjct: 402 AGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEA 461
Query: 477 ATMLRKE 483
L E
Sbjct: 462 VLKLPDE 468
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 124/243 (51%), Gaps = 3/243 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RP++H L+ ++ + V V+ +MAR+G E + + Y+VL+ C+ + +A+
Sbjct: 162 RPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADN 221
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L EM K V D+ YNT+I +C+ G A M G++ VT+ L++G+C
Sbjct: 222 LLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFC 281
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G + A+ ++ ++ + P T LI C + +AL L+ + GL+PT
Sbjct: 282 KEGRMREAMRLFKEI--RDATPNHVTYTTLIDGYCRLNDLDQALR-LREEMEAQGLYPTV 338
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y +++ LCE G++ +A K+ EM K EP + I+ Y K G+++ A ++
Sbjct: 339 VTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNR 398
Query: 484 MFE 486
M E
Sbjct: 399 MVE 401
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 150/272 (55%), Gaps = 3/272 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + ++R ++ P+V TF+AL+ F +EG + E ++ EM + +P
Sbjct: 304 YGRWSDASRLLSDMIER--KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+YS L+ FC R+ EA++++E M K+ DVV+Y+T+I GFC+ + E FRE
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFRE 421
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G+ ++VT+ L+ G +AGD D A ++ +M G P T L+ LC +
Sbjct: 422 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ +A+ + + + + + PT +Y +I+G+C+ GK+E+ + + KG +P + Y+
Sbjct: 482 LEKAMVVFE-YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
I G+ ++G+ E A L KEM E+ G
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 121/239 (50%), Gaps = 1/239 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P V + ++ G + + +++ EM G P+ +YS L++ C R +A
Sbjct: 251 KLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L +M ++ + DV ++ +I F + G++ AE+ + EM ++ S VT+ L+NG
Sbjct: 311 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C +D A ++ M K P+ + LI C +RV E +++ + + + GL
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFR-EMSQRGLVG 429
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y LI+GL + G + A ++ EMV G P++ Y+ +DG K G +E A ++
Sbjct: 430 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 120/244 (49%), Gaps = 1/244 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +T++ L+ F R V +M +LG EP+ + S L+ +C +R+ EA L
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++M + + V +NT+I G + + A M G + VT+ +VNG C+
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
GD D A ++ N M + EP +I LC + + +AL++ K K G+ P +
Sbjct: 235 GDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETK-GIRPNVVT 293
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI LC G+ +A ++ ++M+ + P + +SA ID ++KEG + A L EM
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 486 ENQV 489
+ +
Sbjct: 354 KRSI 357
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 1/245 (0%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V +PN TFN L+ G + + + M GC+PD +Y V++ C+
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
A L +M +E V+ Y TII G C+ M A F+EM G+ + VT+ L+
Sbjct: 239 LAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+ C G A + +DM + P+ T LI + ++ EA + L +VK +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA-EKLYDEMVKRSI 357
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P+ +Y LI G C +++EA ++ MV K P + YS I G+ K V+
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGME 417
Query: 480 LRKEM 484
L +EM
Sbjct: 418 LFREM 422
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 147/315 (46%), Gaps = 13/315 (4%)
Query: 185 RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF---GLD----SDATAGIGKDV 237
R L+ RG VS + W R + Y+ YRE GL DA A G+ V
Sbjct: 17 RSLVVRGNVATVSPSFSFFWR--RAFSGKTSYD-YREKLSRNGLSELKLDDAVALFGEMV 73
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
K R P++ F+ L+ + F+ V + +M LG + Y+YS+L+ FC +
Sbjct: 74 KS--RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQ 131
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A + +M E ++V ++++ G+C ++ A +M ++G + ++VTF
Sbjct: 132 LPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 191
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++G A+ + + M KG +P+ T V++ LC KR + IL ++ +
Sbjct: 192 LIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLC-KRGDTDLAFILLNKMEQG 250
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
L P Y +I GLC+ M++AL + EM KG P++ YS+ I G A
Sbjct: 251 KLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310
Query: 478 TMLRKEMFENQVRQE 492
+ L +M E ++ +
Sbjct: 311 SRLLSDMIERKINPD 325
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 21/273 (7%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
D ++FE +V + C + LIK + K +++ +++ R + RGL
Sbjct: 378 DEAKQMFEFMVS--KHCFPDVVSYSTLIKGFCKAK---RVDEGMELFREMSQRGLVGNTV 432
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T LI + + EI++E+ SD V PN+ T+N L+ G
Sbjct: 433 TYTTLIQGLFQAGDCDMAQEIFKEMV---SDG-------------VPPNIMTYNTLLDGL 476
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G EK V+ + R EP Y+Y++++ C+ ++ + L+ + K V+ DV
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
VAYNT+I GFC G A+ F+EM G +S + L+ R GD +++ + +
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
M GF + STI ++ L D R LD+L
Sbjct: 597 MRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 629
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 194/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHNLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAXILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM D + + V
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E ++ M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM+ G +PD +Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + + +M R G+ P
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYMP 414
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I ++++S+ LS + T N LI+ + + + ++ +D + G+
Sbjct: 256 RVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 197/426 (46%), Gaps = 33/426 (7%)
Query: 91 FFSF--TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ + S +H+L SY T+IH L +++ A+ +I++ + +F ++
Sbjct: 1 FFTWLSSPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAIL 60
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA------- 201
+T S +VF +I LE + C R+ V TC
Sbjct: 61 ETKGTQRSDIYVFSGIITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMK 117
Query: 202 -----LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVH 248
L+W + + GY F + + G+ D +RP+V
Sbjct: 118 LKYFKLVWGFYE-ESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVV 176
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+FN LM G+ + G + + M G +PD Y+YSVL+ C+E +M + +L++EM
Sbjct: 177 SFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEM 236
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
D + + V + T+I G C+ G + A E +++M + VT+ L+ G C+ GD+
Sbjct: 237 LDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDL 296
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A + ++M KG +P+ T LI C + + A + + R++K + + +Y
Sbjct: 297 KQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFE-YRXRMIKENIRLDDVAYTA 355
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI GLC+EG+ +A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM
Sbjct: 356 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEM---- 411
Query: 489 VRQEDG 494
Q DG
Sbjct: 412 --QRDG 415
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 82/152 (53%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ +D+ EM+ G +PD +Y+ L+ C+E + A
Sbjct: 276 LSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAF 335
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 336 EYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 395
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ GDV + + +M R G+ P T VL+
Sbjct: 396 CKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLM 427
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ +D + G+
Sbjct: 260 RVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDL------IDEMSMKGL-- 311
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 312 --------KPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQE 363
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT+
Sbjct: 364 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTY 423
Query: 356 EHLVNG 361
L+NG
Sbjct: 424 NVLMNG 429
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 191/409 (46%), Gaps = 23/409 (5%)
Query: 98 KSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSA 157
S +H+L SY T+IH L +++ A+ +I+V + +F +++T S
Sbjct: 9 NSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSD 68
Query: 158 PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
+VF LI LE + C + R L V TC ++ + + K +
Sbjct: 69 IYVFSGLITAYLETGFLRDAIECYRLTR---EHKLWVPFDTCRKVLEHLMKLKYFKLVWG 125
Query: 218 IYREVFGLD----------------SDATAGIGKDVKRVVR---VRPNVHTFNALMVGFY 258
Y E+ D + + V + +RP+V ++N LM G+
Sbjct: 126 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 185
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
R G ++ + M G PD Y+YSVL+ C+E +M +A +L++EM K + + V
Sbjct: 186 RLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 245
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+ T+I G C+ G + A E ++ M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 246 TFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 305
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
KG +P+ T LI C + + A + K R+++ + + +Y LI GLC+EG+
Sbjct: 306 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRK-RMIQENIRLDDVAYAALISGLCQEGR 364
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+A K+ EM+ G +P Y+ I+ + K+G+V + L KEM N
Sbjct: 365 SVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRN 413
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 81/150 (54%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++ D+ EM+ G +PD ++Y+ L+ C+E + A +
Sbjct: 277 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEH 336
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C+ G AE+ REM G++ + T+ ++N +C+
Sbjct: 337 RKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCK 396
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 397 KGDVWKGSKLLKEMQRNGHAPSVVTYNVLM 426
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 97/209 (46%), Gaps = 1/209 (0%)
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D Y +S L+ + E +R+A + + R+ + ++ ++ F+
Sbjct: 68 DIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 127
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
E+ G +S F L++ +C+ GD+ A V++ + + G P + L+
Sbjct: 128 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 187
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+ E LK+ ++ G+ P +Y LI GLC+E KM++A ++ EM+ KG P+
Sbjct: 188 GHLDEGFR-LKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVT 246
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ IDG+ K G V+ A + K M +
Sbjct: 247 FTTLIDGHCKNGRVDFAMEIYKRMLSQSL 275
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ L + T N LI+ + + + +++ +D + G+
Sbjct: 259 RVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDL------IDEMSMKGL-- 310
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 311 --------KPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL----DDVAYAALISG 358
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM ++ D Y II FC+ G++ + + +EM +G S
Sbjct: 359 LCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPS 418
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 419 VVTYNVLMNG 428
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 199/425 (46%), Gaps = 31/425 (7%)
Query: 91 FFSF--TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ + S +H+L SY T+IH L +++ A+ +I+V + +F ++
Sbjct: 3 FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLWEAKSLIQVVVSRKGKGSASAVFAAIL 62
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+T S +VF LI LE + C + R V TC ++ + +
Sbjct: 63 ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTR---EHKFWVPFDTCRKVLEHLMK 119
Query: 209 GKGVISGYEIYREVFGLD----------------SDATAGIGKDVKRVVR---VRPNVHT 249
K + Y+E+ D + + V + +RP+V +
Sbjct: 120 LKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N LM G+ R G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + + V + T+I G C+ G + A E +++M + +T+ L+ G C+ GD+
Sbjct: 240 VKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+ ++M KG +P+ T LI C + + A + K ++++ + E +Y L
Sbjct: 300 QVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRK-QMIQENIRLDEVAYTAL 358
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I GLC+EG+ +A K+ EM+ G +P Y+ I+ + K+G+V + L KEM
Sbjct: 359 ISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM----- 413
Query: 490 RQEDG 494
Q DG
Sbjct: 414 -QRDG 417
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 81/150 (54%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++V + EM+ G +PD +Y+ L+ C+E + A +
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEH 339
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M +N+ D VAY +I G C+ G AE+ REM G++ + T+ ++N +C+
Sbjct: 340 RKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCK 399
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 400 KGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 92/190 (48%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ L + T N LI+ + + + + + +D + G+
Sbjct: 262 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHL------IDEMSMKGL-- 313
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 314 --------KPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRL----DEVAYTALISG 361
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM + ++ D Y II FC+ G++ + + +EM G S
Sbjct: 362 LCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 422 VVTYNVLMNG 431
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 158/326 (48%), Gaps = 20/326 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+ ++LI C + +++ V I+ + G+ ST NALI + + E+
Sbjct: 124 YSLNVLINCLCRLNHVD---FAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVEL 180
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+ E+ V+R PNV ++N ++ G + G DV+ +M + GC
Sbjct: 181 FNEM--------------VRR--GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGC 224
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+PD +Y+ ++ C++R + +A + EM D+ + +V YN ++ GFC +G++ A
Sbjct: 225 KPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATR 284
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F+EM V +VT LV+G C+ G V A LV+ M KG EP ST L+ C
Sbjct: 285 LFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYC 344
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+R + EA + + +++ G P SY LI G C+ +M+EA + AEM K P
Sbjct: 345 LQRLMNEAKKVFEI-MIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDT 403
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEM 484
YS + G + G + A + KEM
Sbjct: 404 VTYSTLMQGLCQFGRPKEALNIFKEM 429
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN+ T+NALM G+ + + + V+ M R GC P +SY++L+ FC+ RRM EA+
Sbjct: 329 VEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAK 388
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EM K + D V Y+T++ G C+ G A F+EM G+ + VT+ L++G+
Sbjct: 389 SLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGF 448
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G +D A+ + M K EP +LI + ++ E L +++ G+ PT
Sbjct: 449 CKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKL-EVAKELFSKLFADGIRPT 507
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++Y +IKGL +EG +EA + +M GF P+ Y+ I G+++ + A L
Sbjct: 508 IRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLID 567
Query: 483 EM 484
EM
Sbjct: 568 EM 569
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 148/310 (47%), Gaps = 17/310 (5%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
VD+ + + G V T N +I + + + V E E+ LD
Sbjct: 213 VDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEM--LDRG------------ 258
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ PNV T+N ++ GF G + ++ EM PD + ++L+ C+E + E
Sbjct: 259 --IPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSE 316
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A ++E M +K VE ++ YN ++ G+C M A++ F M G ++ L+N
Sbjct: 317 ARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILIN 376
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G+C++ +D A + +M K P+ T L+ LC R EAL+I K + +GL
Sbjct: 377 GFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFK-EMCSYGLL 435
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y L+ G C+ G ++EALK+ M K EP++ ++ I+G G +E+A L
Sbjct: 436 PNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKEL 495
Query: 481 RKEMFENQVR 490
++F + +R
Sbjct: 496 FSKLFADGIR 505
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 133/264 (50%), Gaps = 3/264 (1%)
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
A + +GK K + + P TFNAL+ G EG ++ +++ EM R G EP+ SY+ +
Sbjct: 142 AVSILGKMFK--LGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTI 199
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ C+ A ++++M + DVV YNTII C+ + A EF EM G+
Sbjct: 200 INGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGI 259
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+ T+ +V+G+C G ++ A ++ +M + P+ T+ +L+ LC + V EA
Sbjct: 260 PPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARL 319
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+ + K G+ P +Y L+ G C + M EA KV M+ +G P + Y+ I+G+
Sbjct: 320 VFETMTEK-GVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGF 378
Query: 469 MKEGNVEMATMLRKEMFENQVRQE 492
K ++ A L EM+ + +
Sbjct: 379 CKSRRMDEAKSLLAEMYHKALNPD 402
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 144/308 (46%), Gaps = 17/308 (5%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+ ++ + ++ RG+ V T N ++ + +++E+ G D
Sbjct: 244 VNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRD---------- 293
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
V P+ T L+ G +EG + V+ M G EP+ +Y+ LM +C +R
Sbjct: 294 ------VMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQR 347
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
M EA+K++E M + V +YN +I GFC+ M A+ EM + +VT+
Sbjct: 348 LMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYS 407
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L+ G C+ G A+ ++ +MC G P T +L+ C + EAL +LK+ K
Sbjct: 408 TLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEK 467
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
L P + LI+G+ GK+E A ++ +++ G P++ Y+ I G +KEG +
Sbjct: 468 -KLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDE 526
Query: 477 ATMLRKEM 484
A L ++M
Sbjct: 527 AYDLFRKM 534
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 129/249 (51%), Gaps = 5/249 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V NV++ N L+ R + + +M +LG P +++ L+ C E +++EA
Sbjct: 119 VTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAV 178
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ EM + E +V++YNTII G C+ G + A + F++M +G + VT+ +++
Sbjct: 179 ELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSL 238
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ V+ A+ ++M +G P T ++ C ++ EA + K V + + P
Sbjct: 239 CKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGR-DVMPD 297
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ L+ GLC+EG + EA V M KG EP++ Y+A +DGY + + A K
Sbjct: 298 TVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEA----K 353
Query: 483 EMFENQVRQ 491
++FE +RQ
Sbjct: 354 KVFEIMIRQ 362
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 124/253 (49%), Gaps = 3/253 (1%)
Query: 239 RVVRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
R+VR+ RP+V F + F ++ + V + +M G + YS +VL+ C
Sbjct: 78 RMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLN 137
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ A + +M + +N +I G C G++ A E F EM G E + +++
Sbjct: 138 HVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYN 197
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
++NG C+ G+ A+ V+ M + G +P+ T +I LC R V +A++ L + ++
Sbjct: 198 TIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFL-SEMLD 256
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G+ P +Y ++ G C G++ EA ++ EMVG+ P + +DG KEG V
Sbjct: 257 RGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSE 316
Query: 477 ATMLRKEMFENQV 489
A ++ + M E V
Sbjct: 317 ARLVFETMTEKGV 329
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 73/150 (48%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T++ L+ GF + G ++ + M EP+ +++L+ ++ A++L
Sbjct: 436 PNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKEL 495
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ ++ + + Y +I G + G A + FR+M G +S ++ ++ G+ +
Sbjct: 496 FSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQ 555
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
D +AI + ++M K F ST ++L+
Sbjct: 556 NQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 56/119 (47%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ PN+ L+ G + G E ++++ ++ G P +Y+V++ +E EA
Sbjct: 468 KLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEA 527
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
L+ +M D + +YN +I GF + + + A EM ++ TF+ L++
Sbjct: 528 YDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 196/425 (46%), Gaps = 31/425 (7%)
Query: 91 FFSF--TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ + S +H+L SY T+IH L +++ A+ +I+V + +F ++
Sbjct: 3 FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASXVFAAIL 62
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+T S +VF LI LE + C + R TC ++ + +
Sbjct: 63 ETKGTQRSDIYVFSGLIXAYLESGFLRDAIECYRLTR---EHKFXXPFDTCRKVLEHLMK 119
Query: 209 GKGVISGYEIYREV------------------FGLDSDATAGIGK-DVKRVVRVRPNVHT 249
K + Y+E+ F D D D +RP+V +
Sbjct: 120 LKYFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVS 179
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N LM G+ R G ++ + M G +PD Y+YSVL+ C+E +M +A +L++EM
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEML 239
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + + V + T+I G C+ G + A E +++M + +T+ L+ G C+ GD+
Sbjct: 240 VKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLK 299
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + +M KG +P+ T LI C + + A + + R+++ + + +Y L
Sbjct: 300 QANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFE-HRXRMIEENIRLDDVAYTAL 358
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I GLC+EG+ +A K+ M+ G +P Y+ I+ + K+G+V + L KEM
Sbjct: 359 ISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEM----- 413
Query: 490 RQEDG 494
Q DG
Sbjct: 414 -QRDG 417
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++ D+ EM+ G +PD +Y+ L+ C+E + A +
Sbjct: 280 PDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEH 339
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M ++N+ D VAY +I G C+ G AE+ R M G++ + T+ ++N +C+
Sbjct: 340 RXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCK 399
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 400 KGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ L + T N LI+ + + + ++ E+ + G+
Sbjct: 262 RVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEM------SMKGL-- 313
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG + + M D +Y+ L++ C+E
Sbjct: 314 --------KPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQE 365
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R +AEK+ M ++ D Y II FC+ G++ + + +EM G S VT+
Sbjct: 366 GRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTY 425
Query: 356 EHLVNG 361
L+NG
Sbjct: 426 NVLMNG 431
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 196/418 (46%), Gaps = 25/418 (5%)
Query: 91 FFSF--TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ + S +H+L SY T+IH L +++ A+ +I V + +F ++
Sbjct: 3 FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVL 62
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+T S +VF LI LE + C + R L V TC ++ + +
Sbjct: 63 ETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTR---EHKLWVPFDTCRKVLEHLMK 119
Query: 209 GKGVISGYEIYREVFGLD----------------SDATAGIGKDVKRVVR---VRPNVHT 249
K + Y E+ D + + V + +RP+V +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N LM G+ R G ++ + M G +PD Y+YSVL+ C+E +M A +L++EM
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEML 239
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + + V + T+I G C+ G + A E +++M + +T+ L+ G C+ GD+
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + ++M KG +P+ T LI C + + A + K R+++ + + +Y L
Sbjct: 300 QAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRK-RMIQENIRLDDVAYTAL 358
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
I GLC+EG+ +A K+ EM+ G +P Y+ I+ + K+G+V + L KEM +
Sbjct: 359 ISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRD 416
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 81/150 (54%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++ D+ EM+ G +PD ++Y+ L+ C+E + A +
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEH 339
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C+ G AE+ REM G++ + T+ ++N +C+
Sbjct: 340 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCK 399
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 400 KGDVWKGSKLLKEMHRDGHAPSVVTYNVLM 429
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 109/250 (43%), Gaps = 44/250 (17%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY-SYSVLMAVFCEERRMREAE 302
R +++ F+ L+ + G +E RL E + + V +++ +
Sbjct: 69 RSDIYVFSGLITAYLESGFLRDA----IECYRLTREHKLWVPFDTCRKVLEHLMKLKYFK 124
Query: 303 KLW---EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+W EE+ + + +N ++ FC+ G++ A+ F + G+ S V++ L+
Sbjct: 125 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 184
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
NGY R GD+D +GF LK+ ++ G+
Sbjct: 185 NGYIRLGDLD-----------EGFR-------------------------LKSAMLASGV 208
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI GLC+E KM+ A ++ EM+ KG P+ ++ IDG+ K G V++A
Sbjct: 209 QPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAME 268
Query: 480 LRKEMFENQV 489
+ K+M +
Sbjct: 269 IYKQMLSQSL 278
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 92/190 (48%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ L + T N LI+ + + + +++ +D + G+
Sbjct: 262 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDL------IDEMSMKGL-- 313
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 314 --------KPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL----DDVAYTALISG 361
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM ++ D Y II FC+ G++ + + +EM G S
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPS 421
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 422 VVTYNVLMNG 431
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 136/534 (25%), Positives = 234/534 (43%), Gaps = 80/534 (14%)
Query: 22 LLSQFSTSSSTPP----SDQSHNLIATVVSLLTHHRSKSRWNHLLSLCR--SGLTPTQFS 75
LL +S+ +S P + +L A ++S+L S+ W SL + LTP+ S
Sbjct: 17 LLKPYSSIASLPQILSLDSEPVDLSAQLLSIL----SRPNWQKHPSLRKLLPSLTPSHVS 72
Query: 76 QIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPA----------- 124
+ +P AL FF++ + KH++ SY+++++IL RARL+G A
Sbjct: 73 SL-FAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSC 131
Query: 125 ---RDVIRV--ALRSPEND------PKLKLFEVLVKTY------------------RECG 155
DV+ V R D P L+ + ++ + +
Sbjct: 132 CSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQIS 191
Query: 156 SAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISG 215
+ F+ ++ ++ N+ + E ++ GL T +LI R KGV +
Sbjct: 192 PNIYTFNAMVNGYCKIGNVVEAEL---YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNA 248
Query: 216 YEIY----------------REVFGLDSDATAG-IGKDVKRVVRVR-----PNVHTFNAL 253
YE++ + GL AG I + +K + P V T+ L
Sbjct: 249 YEVFLIMPQKGCQRNEVSYTNLIHGL---CEAGRINEALKLFADMTEDNCCPTVRTYTVL 305
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ G + +++ EM GCEP+ ++Y+VL+ C+E +M EA K+ EM +K +
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
VV YN +I G+C+ G + A E M + ++ T+ L+ G C+ V A+
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ N M + P T LI C + A +L + + + GL P + +Y I L
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL-SLMNENGLVPDQWTYSVFIDTL 484
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
C+EG++EEA + + KG + + IY+A IDGY K G +++A L + M +
Sbjct: 485 CKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND 538
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 193/459 (42%), Gaps = 65/459 (14%)
Query: 64 LCRSGLTPTQFSQIAL--------GLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHIL 115
+ ++GL P F+ +L G+ N A F K C+ + SY +IH L
Sbjct: 220 IVQAGLHPDTFTYTSLILGHCRNKGVDN----AYEVFLIMPQKG-CQRNEVSYTNLIHGL 274
Query: 116 SRARLIGPARDVIRVALRSPEND--PKLKLFEVLV----------------KTYRECGSA 157
A G + +++ E++ P ++ + VL+ +E G
Sbjct: 275 CEA---GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE 331
Query: 158 PFV--FDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVIS 214
P V + +LI C E K++ ++ + +GL V T NALI + +
Sbjct: 332 PNVHTYTVLIDGLCKE----NKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDD 387
Query: 215 GYEI---------------YREVF-GL-----DSDATAGIGKDVKRVVRVRPNVHTFNAL 253
+EI Y E+ GL A A + K ++R ++ P++ T+N+L
Sbjct: 388 AFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER--KLSPSLITYNSL 445
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ G + E + M G PD ++YSV + C+E R+ EA L++ ++ K V
Sbjct: 446 IHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGV 505
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
+ + V Y +I G+C++G++ A M +S T+ L+ G C+ + A
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ M G +P T +LIGE+ AL + +V G P +Y +
Sbjct: 566 LVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN-HMVSLGYQPDVCTYTAFLHAY 624
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+G +EE V A+M +G P L Y+ IDGY + G
Sbjct: 625 FSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLG 663
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 132/321 (41%), Gaps = 40/321 (12%)
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGK-DVKRVVRVR-------PNVHTFNALM 254
+++ + KGV + IY + D +GK DV + R PN +T+N L+
Sbjct: 496 LFDSVKAKGVKANEVIYTALI----DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
G +E ++ + +M +G +P +Y++L+ ++ A K++ M +
Sbjct: 552 EGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQ 611
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
DV Y + + G + ++ +M G+ VT+ L++GY R G A
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFE--------------ALDI----------- 409
M G +P + +LI L + R+ E ++DI
Sbjct: 672 LKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEI 731
Query: 410 ---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L ++V+ G Y LI G C++ ++EEA + M +G PS +IY++ +D
Sbjct: 732 ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 791
Query: 467 GYMKEGNVEMATMLRKEMFEN 487
K G A L M EN
Sbjct: 792 CCCKLGVYAEAVRLVDAMVEN 812
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 154/392 (39%), Gaps = 53/392 (13%)
Query: 144 FEVL-VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
FE+L + CG ++ LI C L K K+ + ++ ++ R LS + T N+L
Sbjct: 389 FEILDLMESNSCGPNTRTYNELI-CGLCKK--RKVHKAMALLNKMLERKLSPSLITYNSL 445
Query: 203 IWEVSRGKGVISGYEIYREVF--GLDSDA-----------------TAGIGKDVKRVVRV 243
I + + S Y + + GL D AG D + V
Sbjct: 446 IHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGV 505
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+ N + AL+ G+ + G + + M C P+ Y+Y+VL+ C+E++M+EA
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +M V+ VV Y +IG + G A + F M G + T+ ++ Y
Sbjct: 566 LVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYF 625
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G ++ V M +G P+ T VLI A D LK +V G P+
Sbjct: 626 SQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKC-MVDTGCKPSL 684
Query: 424 KSYMFLIKGLCEEGKMEE-----------------------------ALKVQAEMVGKGF 454
LIK L E +M+E ALK+ +MV G
Sbjct: 685 YIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGC 744
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ IY A I G+ ++ +E A L M E
Sbjct: 745 TIDVSIYGALIAGFCQQERLEEAQGLVHHMKE 776
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 142/343 (41%), Gaps = 33/343 (9%)
Query: 154 CGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
C + +++LI+ C E +K++ +V +++ G+ V T LI E+ +
Sbjct: 540 CLPNSYTYNVLIEGLCKE----KKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAF 595
Query: 213 ISGYEIYREV--FGLDSDA-----------TAGIGKDVKRVVR------VRPNVHTFNAL 253
+++ + G D + G+ ++V V+ + P++ T+ L
Sbjct: 596 DHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVL 655
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ G+ R G + D M GC+P Y S+L+ E RM+E R +
Sbjct: 656 IDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET-------RSEIG 708
Query: 314 EHDVVAYNTI-IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
V N++ I + E A + F +M G + L+ G+C+ ++ A
Sbjct: 709 IDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQ 768
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+ + M +G P L+ C EA+ ++ A +V+ GL P +SY L+ G
Sbjct: 769 GLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDA-MVENGLLPLLESYKLLVCG 827
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
L EG E+A V ++ G+ + IDG +K V+
Sbjct: 828 LYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVD 870
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
+E ++ +M GC D Y L+A FC++ R+ EA+ L M+++ + YN+
Sbjct: 729 YEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNS 788
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
++ C++G A A M +G+ +++ LV G G + A V++ + G
Sbjct: 789 LLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCG 848
Query: 383 FEPEGSTIEVLIGELCDKRRVFEA---LDILKAR 413
+ + +VLI L + V E +DI++ +
Sbjct: 849 YNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 882
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 197/425 (46%), Gaps = 31/425 (7%)
Query: 91 FFSF--TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ + S +H+L SY T+IH L +L+ A+ +I V + +F ++
Sbjct: 3 FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQLLSEAKSLIEVVVSRKGKGSASAVFAAVL 62
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+T S +VF LI LE + C + R L V TC ++ + +
Sbjct: 63 ETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTR---EHKLWVPFDTCRKVLEHLMK 119
Query: 209 GKGVISGYEIYREVFGLD----------------SDATAGIGKDVKRVVR---VRPNVHT 249
K + Y E+ D + + V + +RP+V +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N LM G+ R G ++ + M G +PD Y+YSVL+ C+E +M A L++EM
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEML 239
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + + V + T+I G C+ G + A E +++M + +T+ L+ G C+ GD+
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + ++M KG +P+ T LI C + + A + K R+++ + + +Y L
Sbjct: 300 QAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRK-RMIQENIRLDDVAYTAL 358
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I GLC+EG+ +A K+ EM+ G +P Y+ ++ + K+G+V + L KEM
Sbjct: 359 ISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEM----- 413
Query: 490 RQEDG 494
Q DG
Sbjct: 414 -QRDG 417
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 81/150 (54%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++ D+ EM+ G +PD ++Y+ L+ C+E + A +
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEH 339
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C+ G AE+ REM G++ + T+ +VN +C+
Sbjct: 340 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCK 399
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 400 KGDVWKGSKLLKEMQRDGHAPSVVTYNVLM 429
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ L + T N LI+ + + + +++ +D + G+
Sbjct: 262 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDL------IDEMSMKGL-- 313
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 314 --------KPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL----DDVAYTALISG 361
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM ++ D Y I+ FC+ G++ + + +EM G S
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPS 421
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 422 VVTYNVLMNG 431
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 192/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+VF LI LE + C R+ V TC +I + + K +
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGF 123
Query: 219 YREVFGLDSDATAGI----------GKDVKRVVRV---------RPNVHTFNALMVGFYR 259
Y E A+ G ++ V RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M +A L++EM D + + V
Sbjct: 184 IGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +R+M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + + +Y LI LC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRK-RMIKENIRLDDVAYTALISXLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 411
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I R ++S+ L + T N LI+ + + + ++ +D + G+
Sbjct: 256 RVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G + VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNVVT 418
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 197/425 (46%), Gaps = 31/425 (7%)
Query: 91 FFSF--TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ + S +H+L SY T+IH L ++ A+ +++V + +F ++
Sbjct: 3 FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAAIL 62
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+T S +VF LI LE + C + R L V TC ++ + +
Sbjct: 63 ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTR---EHKLWVPFDTCRKVLEYLMK 119
Query: 209 GKGVISGYEIYREVFGLD----------------SDATAGIGKDVKRVVR---VRPNVHT 249
K + Y E+ D + + V + +RP+ +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVS 179
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N LM G+ R G ++ + M G +PD Y+YSVL+ +E +M +A++L++EM
Sbjct: 180 YNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEML 239
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + + V + T+I G C+ G + A E +++M + +T+ L+ G C+ GD+
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + +DM RKG +P+ T LI C + + A + K R+++ + + Y L
Sbjct: 300 QAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRK-RMIQENIRLDDVVYTAL 358
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I GLC+EG+ +A K+ EM+ G P Y+ I+ + K+G+V + L KEM
Sbjct: 359 ISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEM----- 413
Query: 490 RQEDG 494
Q DG
Sbjct: 414 -QRDG 417
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++ D+ +M+R G +PD +Y+ L+ C+E + A +
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEH 339
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D V Y +I G C+ G AE+ REM G+ + T+ ++N +C+
Sbjct: 340 RKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCK 399
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 400 KGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ L + T N LI+ + + + +++ +D + G+
Sbjct: 262 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDL------IDDMSRKGL-- 313
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G +EG AFE + + E RL D Y+ L++
Sbjct: 314 --------KPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRL----DDVVYTALISG 361
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM + D Y II FC+ G++ + + +EM G S
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 422 VVTYNVLMNG 431
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 187/387 (48%), Gaps = 38/387 (9%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+Y T+IH L + +G +R IR+ LRS + C ++ +I
Sbjct: 181 TYGTLIHGLCK---VGNSRAAIRL-LRS--------------MVQKNCEPNVITYNTIID 222
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
C + + + + ++I ++++G+S VST N++I + + + ++ V L
Sbjct: 223 CLFKDRQVNE---ALNIFSEMIAKGISPNVSTYNSIIHGLCK-------FSEWKHVATLM 272
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
++ ++ PNV F L+ +EG DV M + G EPD +Y+
Sbjct: 273 NEMVDS---------KIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYT 323
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
LM C M EA+K+++ M K +V++Y+T+I G+C+I + +A F EM
Sbjct: 324 ALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQR 383
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
+ + VT+ L++G C G + AI ++++M G P+ T +L+ LC R + +A
Sbjct: 384 ELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQA 443
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ +LKA + L P +SY +I G+C G++E A + + + KG P + Y+ I+
Sbjct: 444 MAMLKA-IEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMIN 502
Query: 467 GYMKEGNVEMATMLRKEMFENQVRQED 493
G +G + AT L +EM + +D
Sbjct: 503 GLCLQGLLAEATKLFREMNTDGCSPDD 529
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 146/332 (43%), Gaps = 18/332 (5%)
Query: 158 PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
P V D K + N++ T + + + + S G+ V T +I V G+
Sbjct: 72 PSVVDF-AKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFS 130
Query: 218 IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
+ ++F L +P+ TF L+ G EG + ++ +M G
Sbjct: 131 VLAKIFKLGH----------------QPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
+P+ +Y L+ C+ R A +L M KN E +V+ YNTII + ++ A
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
F EM G+ + T+ +++G C+ + + N+M P L+ L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C + V A D++ +++ G+ P +Y L+ G C +M+EA KV MV KG P+
Sbjct: 295 CKEGMVTIAHDVVDV-MIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPN 353
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ YS I+GY K ++ A L +EM + ++
Sbjct: 354 VISYSTLINGYCKIQRIDKAMYLFEEMCQREL 385
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+N L+ G G ++ EM G PD +Y +L+ C+ R + +A +
Sbjct: 387 PNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAM 446
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + N+ D+ +YN +I G C +GE+ A + F + G+ T+ ++NG C
Sbjct: 447 LKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCL 506
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A ++ +M G P+ T ++ A+ +L+ + + F +
Sbjct: 507 QGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRG--FSADA 564
Query: 425 SYMFLIKGLCEEGKMEEALK 444
S + LI + + +++++K
Sbjct: 565 STITLIVEMLSDDGLDQSVK 584
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 193/432 (44%), Gaps = 59/432 (13%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQ-HKSLCKHSLSSYATIIHILSRARLIGPAR-- 125
LTP+ ++ GL NNP LAL+FF ++ + +LC HS +Y+ ++ LS A+
Sbjct: 102 LTPSIAFEVVRGL-NNPELALKFFQLSRVNLNLC-HSFRTYSFLLRSLSEMGFHESAKAV 159
Query: 126 -DVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIV 184
D + + SP+ V L+ + T VD
Sbjct: 160 YDCMNIDGHSPDAS---------------------VLGFLVSSATDAGKFNIARTWVD-- 196
Query: 185 RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVR 244
G+ + N L+ ++ RG V +RE GL +
Sbjct: 197 ------GVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSC------------ 238
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
+FN L+ G R G +K +++ EM GC PD +Y+ L+ FC + L
Sbjct: 239 ----SFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDL 294
Query: 305 WEEMRDKN-VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+E+ KN + DVV Y +II G+C++G+M +A F M SG++ ++ TF L+NG+
Sbjct: 295 LKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFG 354
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVKFGLF 420
+ GD+ SA +Y +M G P+ T LI C +V +L + L AR L
Sbjct: 355 KVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNAR----NLS 410
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P E ++ L LC+E ++ EA ++ + +Y+ IDG+ K GNV+ A ++
Sbjct: 411 PNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVI 470
Query: 481 RKEMFENQVRQE 492
EM E + + +
Sbjct: 471 LAEMEEKRCKPD 482
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 130/319 (40%), Gaps = 36/319 (11%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C + +Y T+I+ R + D+++ L + P + + ++ Y + G
Sbjct: 268 CSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLG----- 322
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
K+E + ++S G+ T N LI + ++S +Y
Sbjct: 323 ---------------KMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYE 367
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
E+ ++ P++ TF +L+ G R G E+ +W E+ P
Sbjct: 368 EML----------------LLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSP 411
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+ Y++++L C+E R+ EA +++ +++ YN +I GFC+ G + A
Sbjct: 412 NEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVIL 471
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
EM + +T+ L+ G+C G + AI ++N M G P+ T+ LI L
Sbjct: 472 AEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKA 531
Query: 401 RRVFEALDILKARVVKFGL 419
EA I++ F L
Sbjct: 532 GMPNEAYRIMQIASEDFNL 550
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 196/409 (47%), Gaps = 28/409 (6%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
KHS+ SY + HIL AR+ A V++ + S + +F+VL T C VF
Sbjct: 7 KHSVESYCIVAHILFCARMYYDANSVLKEMVLSKAD---CDVFDVLWSTRNVCVPGFGVF 63
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
D L +++ +E+ C ++ + K +CN L+ ++ +++
Sbjct: 64 DALFSVLIDLGMLEEAIQCFSKMKRFR---VFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 120
Query: 222 VFGL--------------------DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
+ G D +A G+ +++K V P+ T+N+++ GF + G
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLV-PDTVTYNSMIDGFGKVG 179
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ + EM + CEPD +Y+ L+ FC+ ++ + + EM+ ++ +VV+Y+
Sbjct: 180 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 239
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
T++ FC+ G M +A +F+ +M G+ + T+ L++ C+ G++ A + N+M +
Sbjct: 240 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 299
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G E T LI LCD R+ EA ++ ++ G+ P SY LI G + M+
Sbjct: 300 GVEWNVVTYTALIDGLCDAERMKEAEELF-GKMDTAGVIPNLASYNALIHGFVKAKNMDR 358
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
AL++ E+ G+G +P L +Y FI G +E A ++ EM E ++
Sbjct: 359 ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 407
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 127/246 (51%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V NV T+ AL+ G ++ E+++ +M G P+ SY+ L+ F + + M
Sbjct: 299 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 358
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +L E++ + ++ D++ Y T I G C + ++ A+ EM G++++S+ + L++
Sbjct: 359 ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMD 418
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
Y ++G+ + + ++M E T VLI LC + V +A+D FGL
Sbjct: 419 AYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ 478
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+ +I GLC++ ++E A + +MV KG P Y++ +DG K+GNV A L
Sbjct: 479 ANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALAL 538
Query: 481 RKEMFE 486
R +M E
Sbjct: 539 RDKMAE 544
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 149/322 (46%), Gaps = 18/322 (5%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
+ E+++ ++ + + G+ +++ NALI + K + E+ E+ G
Sbjct: 317 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG------ 370
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
++P++ + + G E + V EM G + + Y+ LM +
Sbjct: 371 ----------IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 420
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS-GVESS 351
+ E L +EM++ ++E VV + +I G C+ +++A ++F + G++++
Sbjct: 421 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 480
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+ F +++G C+ V++A ++ M +KG P+ + L+ + V EAL L+
Sbjct: 481 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL-ALR 539
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
++ + G+ +Y L+ GL ++++A EM+G+G P + + + + +
Sbjct: 540 DKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYEL 599
Query: 472 GNVEMATMLRKEMFENQVRQED 493
G ++ A L+ + ++Q+ D
Sbjct: 600 GCIDEAVELQSYLMKHQLLTSD 621
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 122/290 (42%), Gaps = 43/290 (14%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF----------------EVL 147
+L+SY +IH +A+ + A +++ L+ P L L+ +V+
Sbjct: 339 NLASYNALIHGFVKAKNMDRALELLN-ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 397
Query: 148 VKTYRECG--SAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWE 205
+ +ECG + ++ L+ + N + +D ++ L + V V T LI
Sbjct: 398 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL---DIEVTVVTFCVLIDG 454
Query: 206 VSRGKGVISGYEIYREV---FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
+ + K V + + + FGL ++A F A++ G ++
Sbjct: 455 LCKNKLVSKAVDYFNRISNDFGLQANAA------------------IFTAMIDGLCKDNQ 496
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
E ++ +M + G PD +Y+ LM ++ + EA L ++M + ++ D++AY +
Sbjct: 497 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 556
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
++ G ++ +A F EM G+ V ++ + G +D A+
Sbjct: 557 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAV 606
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 136/534 (25%), Positives = 234/534 (43%), Gaps = 80/534 (14%)
Query: 22 LLSQFSTSSSTPP----SDQSHNLIATVVSLLTHHRSKSRWNHLLSLCR--SGLTPTQFS 75
LL +S+ +S P + +L A ++S+L S+ W SL + LTP+ S
Sbjct: 17 LLKPYSSIASLPQILSLDSEPVDLSAQLLSIL----SRPNWQKHPSLRKLLPSLTPSHVS 72
Query: 76 QIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPA----------- 124
+ +P AL FF++ + KH++ SY+++++IL RARL+G A
Sbjct: 73 SL-FAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSC 131
Query: 125 ---RDVIRV--ALRSPEND------PKLKLFEVLVKTY------------------RECG 155
DV+ V R D P L+ + ++ + +
Sbjct: 132 CSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQIS 191
Query: 156 SAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISG 215
+ F+ ++ ++ N+ + E ++ GL T +LI R KGV +
Sbjct: 192 PNIYTFNAMVNGYCKIGNVVEAEL---YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNA 248
Query: 216 YEIY----------------REVFGLDSDATAG-IGKDVKRVVRVR-----PNVHTFNAL 253
YE++ + GL AG I + +K + P V T+ L
Sbjct: 249 YEVFLIMPQKGCQRNEVSYTNLIHGL---CEAGRINEALKLFADMTEDNCCPTVRTYTVL 305
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ G + +++ EM GCEP+ ++Y+VL+ C+E +M EA K+ EM +K +
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
VV YN +I G+C+ G + A E M + ++ T+ L+ G C+ V A+
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ N M + P T LI C + A +L + + + GL P + +Y I L
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL-SLMNENGLVPDQWTYSVFIDTL 484
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
C+EG++EEA + + KG + + IY+A IDGY K G +++A L + M +
Sbjct: 485 CKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND 538
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 192/457 (42%), Gaps = 65/457 (14%)
Query: 66 RSGLTPTQFSQIAL--------GLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSR 117
++GL P F+ +L G+ N A F K C+ + SY +IH L
Sbjct: 222 QAGLHPDTFTYTSLILGHCRNKGVDN----AYEVFLIMPQKG-CQRNEVSYTNLIHGLCE 276
Query: 118 ARLIGPARDVIRVALRSPEND--PKLKLFEVLV----------------KTYRECGSAPF 159
A G + +++ E++ P ++ + VL+ +E G P
Sbjct: 277 A---GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPN 333
Query: 160 V--FDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGY 216
V + +LI C E K++ ++ + +GL V T NALI + + +
Sbjct: 334 VHTYTVLIDGLCKE----NKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389
Query: 217 EI---------------YREVF-GLDSD-----ATAGIGKDVKRVVRVRPNVHTFNALMV 255
EI Y E+ GL A A + K ++R ++ P++ T+N+L+
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER--KLSPSLITYNSLIH 447
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G + E + M G PD ++YSV + C+E R+ EA L++ ++ K V+
Sbjct: 448 GQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKA 507
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
+ V Y +I G+C++G++ A M +S T+ L+ G C+ + A +
Sbjct: 508 NEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLV 567
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
M G +P T +LIGE+ AL + +V G P +Y +
Sbjct: 568 AKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN-HMVSLGYQPDVCTYTAFLHAYFS 626
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+G +EE V A+M +G P L Y+ IDGY + G
Sbjct: 627 QGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLG 663
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 177/454 (38%), Gaps = 61/454 (13%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
AL F+ + K C+ ++ +Y +I L + + AR ++ + P + + L
Sbjct: 318 ALNLFNEMKEKG-CEPNVHTYTVLIDGLCKENKMDEARKMLS-EMSEKGLIPSVVTYNAL 375
Query: 148 VKTY------------------RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMS 189
+ Y CG ++ LI C L K K+ + ++ ++
Sbjct: 376 IDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELI-CGLCKK--RKVHKAMALLNKMLE 432
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDA-----------------T 230
R LS + T N+LI + + S Y + + GL D
Sbjct: 433 RKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEE 492
Query: 231 AGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
AG D + V+ N + AL+ G+ + G + + M C P+ Y+Y+VL+
Sbjct: 493 AGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIE 552
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C+E++M+EA L +M V+ VV Y +IG + G A + F M G +
Sbjct: 553 GLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQP 612
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
T+ ++ Y G ++ V M +G P+ T VLI A D L
Sbjct: 613 DVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFL 672
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEE------------------ALKVQAEMVGK 452
K +V G P+ LIK L E +M+E ALK+ +MV
Sbjct: 673 KC-MVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEH 731
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
G + IY A I G+ ++ +E A L M E
Sbjct: 732 GCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKE 765
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 131/311 (42%), Gaps = 31/311 (9%)
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGK-DVKRVVRVR-------PNVHTFNALM 254
+++ + KGV + IY + D +GK DV + R PN +T+N L+
Sbjct: 496 LFDSVKAKGVKANEVIYTALI----DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
G +E ++ + +M +G +P +Y++L+ ++ A K++ M +
Sbjct: 552 EGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQ 611
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
DV Y + + G + ++ +M G+ VT+ L++GY R G A
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFE------------------ALDILKARVVK 416
M G +P + +LI L + R+ E AL + + ++V+
Sbjct: 672 LKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFE-KMVE 730
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G Y LI G C++ ++EEA + M +G PS +IY++ +D K G
Sbjct: 731 HGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAE 790
Query: 477 ATMLRKEMFEN 487
A L M EN
Sbjct: 791 AVRLVDAMVEN 801
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 118/286 (41%), Gaps = 54/286 (18%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P V T+ L+ ++GAF+ V+ M LG +PD +Y+ + + + + E +
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVD 634
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-----------------GL 345
+ +M ++ + D+V Y +I G+ +G RA +F + M L
Sbjct: 635 DVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNL 694
Query: 346 S------------GVESSSVTFEH------------------------LVNGYCRAGDVD 369
S G++S S T E+ L+ G+C+ ++
Sbjct: 695 SHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLE 754
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + + M +G P L+ C EA+ ++ A +V+ GL P +SY L
Sbjct: 755 EAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDA-MVENGLLPLLESYKLL 813
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ GL EG E+A V ++ G+ + IDG +K V+
Sbjct: 814 VCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVD 859
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 7/174 (4%)
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
+E ++ +M GC D Y L+A FC++ R+ EA+ L M+++ + YN+
Sbjct: 718 YEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNS 777
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
++ C++G A A M +G+ +++ LV G G + A V++ + G
Sbjct: 778 LLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCG 837
Query: 383 FEPEGSTIEVLIGELCDKRRVFEA---LDILKARVVKFGLFPTEKSYMFLIKGL 433
+ + +VLI L + V E +DI++ + G P +Y LI+GL
Sbjct: 838 YNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK----GCQPNPLTYSLLIEGL 887
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 205/459 (44%), Gaps = 51/459 (11%)
Query: 35 SDQSHNLIATVVSLLTHHRSKSRWN-----HLLSLCRSGLTPTQFSQIALGLKNNPHLAL 89
+ H L+ + L+ +S WN L L RS L P Q + L L+ + +AL
Sbjct: 64 DESRHPLVREICRLI---ELRSAWNPKLEGELRHLLRS-LKPRQVCAV-LQLQTDERVAL 118
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRV-ALRSPENDPKLKLFEVLV 148
RFF + + +H Y ++ ILS+ +L A+ V+R+ A R E P+ F ++
Sbjct: 119 RFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEA--FGYVM 176
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+Y G K+ + + M+ G+ +S CN I
Sbjct: 177 VSYSRAG--------------------KLRNAMRXLTMMQKAGIEPDLSICNTAI----- 211
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVED 268
++ G + + V L+ ++V + PNV T+N L+ G+ E +
Sbjct: 212 -HVLVMGNRLDKAVRFLER----------MQIVEIXPNVITYNCLIKGYCDLHRLEDAXE 260
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM-RDKNVEHDVVAYNTIIGGF 327
+ EM GC PD SY +M C+E+R++E L E+M +D N+ D V YNT +
Sbjct: 261 LIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHML 320
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
+ G A EF RE V + +V+ +CR G +D A + N+M KG P+
Sbjct: 321 SKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDV 380
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T +I LC +R+V +A +L+ ++ K G P SY L+ GLC+ G EA ++
Sbjct: 381 VTYTSVINGLCQERKVDQAKKMLR-QMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMN 439
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ P+ YS + G+ +EG A L +EM +
Sbjct: 440 MSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIK 478
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 122/244 (50%), Gaps = 1/244 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R R + ++A++ F REG +K +++ EM GC PD +Y+ ++ C+ER++ +A
Sbjct: 340 RFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQA 399
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+K+ +M + + V+Y ++ G C+ G A E +++T+ L++G
Sbjct: 400 KKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHG 459
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ R G A + +M +KGF P I +LI LC + +V EA ++ + + G
Sbjct: 460 FRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFME-QCLNNGCAV 518
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
++ +I G C++ +E AL + +M P + Y+ ID K+G +E AT L
Sbjct: 519 NVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLA 578
Query: 482 KEMF 485
+M
Sbjct: 579 MKML 582
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 115/245 (46%), Gaps = 3/245 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T++ LM GF REG + D+ EM + G P ++L+ C+E ++ EA++
Sbjct: 448 PNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRF 507
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+ + +VV + T+I GFC+ ++ A +M LS VT+ +++ +
Sbjct: 508 MEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGK 567
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G ++ A + M R G+ P T +I + C RV + L +L+ + +
Sbjct: 568 KGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR---QECRT 624
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I+ LC G +E+A K+ +++ + I+ Y+ +G M+ + M
Sbjct: 625 AYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRM 684
Query: 485 FENQV 489
F +
Sbjct: 685 FNRNL 689
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 112/258 (43%), Gaps = 16/258 (6%)
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
KR + RP F +MV + R G M + G EPD + + V
Sbjct: 161 AKRRIERRP--EAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGN 218
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
R+ +A + E M+ + +V+ YN +I G+C++ + A E EM G +++
Sbjct: 219 RLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYY 278
Query: 357 HLVNGYCRAGDVDSAILVYNDMCR-KGFEPEGSTIEVLIGELCDKRRVFEALDILKA--- 412
++ C+ + L+ M + P+ T + L EAL+ L+
Sbjct: 279 TVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEE 338
Query: 413 ---RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
RV K G Y ++ C EG+M++A ++ EM KG P + Y++ I+G
Sbjct: 339 RRFRVDKVG-------YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLC 391
Query: 470 KEGNVEMATMLRKEMFEN 487
+E V+ A + ++M+++
Sbjct: 392 QERKVDQAKKMLRQMYKH 409
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 136/552 (24%), Positives = 231/552 (41%), Gaps = 99/552 (17%)
Query: 26 FSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLS--LCRSGLTPTQFSQIALGLKN 83
FSTS ST +D + I + ++ R W + S L P Q+ + +
Sbjct: 20 FSTSKSTNENDT--HFITHISDIV---RGNLSWKIAFNDPSISSTLKPHHVEQVLINTLH 74
Query: 84 NPHLALRFFSFTQ-HKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLK 142
+ LALRFF+F HK++ H+ +S+A ++H L + +L PA ++ L +DPK
Sbjct: 75 DSKLALRFFNFLGLHKNM-NHTTTSFAILVHALVQNKLFWPANSLLHTLLLRG-SDPKFV 132
Query: 143 L-----------------FEVLVKTYRECG---SAPFVFDLLIKCCL--EVKNIEKI--- 177
F+ LV +Y + A V L++ L EV+ + I
Sbjct: 133 FEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNG 192
Query: 178 --------------------------ETCVDIVRMLM----------------SRGLSVK 195
TC ++R L S +
Sbjct: 193 LLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLS 252
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRVR--------- 244
+ T N LI + +G GV+ E+ + + GL D V RV+
Sbjct: 253 IVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTL-VLGFCRVQQFDDGICLM 311
Query: 245 ---------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
P + L+ G ++G + D+ V++ R G P+ + Y+ L+ C+
Sbjct: 312 NEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKG 371
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ +AE L++ M N+ + V Y+ +I FC+ G + AE +F M G+ + +
Sbjct: 372 EDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPY 431
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+NG+C+ GD+ +A +Y M +G EP +T LI C +V +A + +
Sbjct: 432 NSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNE 491
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K + P+ ++ LI GLC +M EA K+ EMV + +P+ Y+ I+GY K N++
Sbjct: 492 K-EIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMD 550
Query: 476 MATMLRKEMFEN 487
A L ++M N
Sbjct: 551 KAFELLEDMLHN 562
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 163/336 (48%), Gaps = 20/336 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD---SDATAG 232
I++ D+V L G + NALI + +G+ + +Y+ + ++ +D T
Sbjct: 338 NIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYS 397
Query: 233 IGKD--------------VKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
I D R++ +R ++ +N+L+ G + G E ++ +M
Sbjct: 398 ILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINE 457
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G EP +++ L++ +C++ ++ +A KL+ EM +K + V + +I G C EMA A
Sbjct: 458 GLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEA 517
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ F EM ++ + VT+ ++ GYC+A ++D A + DM G P+ T LI
Sbjct: 518 SKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISG 577
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC RV A D + + K L E Y L+ G C +G++ EAL EM+ +G
Sbjct: 578 LCSTGRVSAAKDFID-DLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINM 636
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
L ++ IDG MK+ +++ L K+M++ +R +
Sbjct: 637 DLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPD 672
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 115/226 (50%), Gaps = 11/226 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+ A M G + G ++ ++ +M P+ +Y + +E M+EA L
Sbjct: 706 PNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDL 765
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM K + + YN +I GFC++G + A + EM +G+ +T+ ++ +CR
Sbjct: 766 HHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCR 824
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+GDV +A+ +++ M RKG EP+ +LI C + +A + L+ ++ GL P +
Sbjct: 825 SGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFE-LRNDMLSRGLKPRQI 883
Query: 425 SYM---------FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ FL+ G C G+++ AL++ M+ + + SLE++
Sbjct: 884 LQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLEMW 929
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 143/322 (44%), Gaps = 26/322 (8%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE----------------VFGL-DSDA 229
+++ GL +T LI + V +++YRE ++GL ++
Sbjct: 454 MINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNE 513
Query: 230 TAGIGKDVKRVV--RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
A K +V +++P T+N ++ G+ + +K ++ +M G PD Y+Y
Sbjct: 514 MAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRP 573
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L++ C R+ A+ +++ KN++ + + Y+ ++ G+C G + A EM G
Sbjct: 574 LISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRG 633
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK---RRVF 404
+ V L++G + D+ + M +G P+ +I + ++
Sbjct: 634 INMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSG 693
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
E LD++ V FP +Y + GLC+ G+++ A + +M+ P+ Y F
Sbjct: 694 ECLDLM----VTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCF 749
Query: 465 IDGYMKEGNVEMATMLRKEMFE 486
+D KEGN++ AT L EM +
Sbjct: 750 LDSLTKEGNMKEATDLHHEMLK 771
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 11/282 (3%)
Query: 210 KGVISGYEIYREVF-GLDSDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFEK 265
G++ YR + GL S KD + ++ N ++AL+ G+ +G +
Sbjct: 562 NGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTE 621
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
EM + G D ++VL+ +++ M+ L ++M D+ + D V Y ++I
Sbjct: 622 ALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMID 681
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
+ + G ++ E M + VT+ +NG C+ G++D A ++ M P
Sbjct: 682 AYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISP 741
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
T + L + + EA D L ++K GL +Y LI+G C+ G++ EA KV
Sbjct: 742 NSVTYGCFLDSLTKEGNMKEATD-LHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKV 799
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA-----TMLRK 482
+EM G P YS I + + G+V A TMLRK
Sbjct: 800 LSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRK 841
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 116/238 (48%), Gaps = 2/238 (0%)
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L+ G ++ +++ + +M G PD Y+ ++ + +E +++ + + M +
Sbjct: 644 LIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEK 703
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+VV Y + G C++GE+ RA F +M + + +SVT+ ++ + G++ A
Sbjct: 704 CFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEAT 763
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
++++M KG +T +LI C R+ EA +L + + + G+FP +Y +I
Sbjct: 764 DLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVL-SEMTENGIFPDCITYSTIIYE 821
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
C G + A+++ M+ KG EP ++ I G G ++ A LR +M ++
Sbjct: 822 HCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLK 879
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 217/472 (45%), Gaps = 30/472 (6%)
Query: 19 KPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIA 78
KP + S F+ +S P +++ V ++L+ R + + + L L ++I
Sbjct: 28 KPHISSHFAVPASREPFQA---IVSRVCAILS--RVQWKGSSELKQLSPQLKAHHVAEI- 81
Query: 79 LGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND 138
+ + + ++FF + + KH+++ + ++++ L R R+ PA + + +++ N+
Sbjct: 82 VAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNE 141
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKC---CLEVKNIEKIETCVDIVRMLMSRGLSVK 195
+++ + E F F L C +++ E +E ++ + +++ G+
Sbjct: 142 EEIRR---VADFLNEISGMGFGFSLY-SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPS 197
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
+ T N LI +S+ V I ++F D + P+V T+ +L++
Sbjct: 198 LLTFNTLINILSKKGKVREAELILSQIFQYD----------------LSPDVFTYTSLIL 241
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G R + V+ M + GC+P+ +YS L+ C E R+ EA + EEM +K +E
Sbjct: 242 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEP 301
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
V Y I C I A E M G + T+ L++G R G ++ AI +Y
Sbjct: 302 TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLY 361
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
+ M ++G P T LI ELC R AL I + G ++Y +IKGLC
Sbjct: 362 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW-MEGHGSLANTQTYNEIIKGLCL 420
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
G +E+A+ + +M+ G P++ Y+ I+GY+ +GNV A L M EN
Sbjct: 421 GGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN 472
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 116/243 (47%), Gaps = 1/243 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPNV T+ AL+ G R G E ++ +M + G P+ +Y+ L+ C R A K
Sbjct: 335 RPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALK 394
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ M + YN II G C G++ +A F +M G + VT+ L+NGY
Sbjct: 395 IFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYL 454
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G+V++A + + M G EP+ T L+ K E+ +V+ GL P
Sbjct: 455 TKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF-SKWGKLESASFYFQEMVECGLNPNP 513
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
SY LI G ++GK++ AL + M G P++E Y+A I+G KE A + +
Sbjct: 514 VSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 573
Query: 484 MFE 486
M E
Sbjct: 574 MVE 576
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 117/500 (23%), Positives = 213/500 (42%), Gaps = 51/500 (10%)
Query: 29 SSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLL--SLCRSGLTPTQFS--QIALGLKNN 84
+S PS + N + ++S + K R L+ + + L+P F+ + LG N
Sbjct: 191 NSGIQPSLLTFNTLINILS----KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 246
Query: 85 PHLALRFFSFTQH-KSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL 143
+L L F F + K C + +Y+T+I+ L + A D++ + +P +
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI-EPTVYT 305
Query: 144 FEV----------------LVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVR 185
+ + LV ++ G P V + LI + + K+E + +
Sbjct: 306 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS---GLSRLGKLEVAIGLYH 362
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG----------IGK 235
++ GL T NALI E+ G + +I+ + G S A +G
Sbjct: 363 KMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGG 422
Query: 236 DVKRVVRV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
D+++ + + P V T+N L+ G+ +G + M GCEPD ++Y+
Sbjct: 423 DIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYN 482
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L++ F + ++ A ++EM + + + V+Y +I G + G++ A + M
Sbjct: 483 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM 542
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G + ++ ++NG + A + + M +G P T LI LC R A
Sbjct: 543 GCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFA 602
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
I + K P +Y LI GLC+EGK +EA + EM KG P +++ ID
Sbjct: 603 FKIFH-DMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLID 661
Query: 467 GYMKEGNVEMATMLRKEMFE 486
G++ G ++ A +L + M +
Sbjct: 662 GFVVLGRIDHAFLLLRRMVD 681
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 1/227 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N L+ GF + G E + EM G P+ SY+ L+ ++ ++ A L
Sbjct: 476 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL 535
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + +V +YN +I G + + AE+ +M G+ + +T+ L++G CR
Sbjct: 536 LKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCR 595
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G A +++DM ++ P T LI LC + + EA +IL + + GL P E
Sbjct: 596 NGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA-EILLKEMERKGLAPDEV 654
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
++ LI G G+++ A + MV G +P+ YS + G KE
Sbjct: 655 TFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKE 701
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 1/194 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN ++ AL+ G ++G + + M +GC P+ SY+ ++ +E R EAE
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAE 568
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+ ++M ++ + +V+ Y T+I G C G A + F +M + T+ L+ G
Sbjct: 569 KICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 628
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G D A ++ +M RKG P+ T LI R+ A +L+ R+V G P
Sbjct: 629 CQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLR-RMVDMGCKPN 687
Query: 423 EKSYMFLIKGLCEE 436
++Y L+KGL +E
Sbjct: 688 YRTYSVLLKGLQKE 701
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
E+ R +F E+ G S + L+ + V+ A +Y M G +P T
Sbjct: 143 EIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFN 202
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
LI L K +V EA +++ +++ ++ L P +Y LI G C ++ A V MV
Sbjct: 203 TLINILSKKGKVREA-ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVK 261
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+G +P+ YS I+G EG V+ A + +EM E +
Sbjct: 262 EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 299
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 190/412 (46%), Gaps = 29/412 (7%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+H+L Y T+IH L +++ A+ +I+V + +F + +T S +VF
Sbjct: 10 RHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVF 69
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
LI LE + C + R V TC ++ + + K + Y E
Sbjct: 70 SGLITAYLESGFLRDAIECYRLTR---EHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEE 126
Query: 222 VFGLD----------------SDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGA 262
+ D + + V + +RP+V ++N LM G+ R G
Sbjct: 127 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 186
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
++ + M G +PD Y+YSVL+ C+E +M +A +L++EM K + + V + T
Sbjct: 187 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 246
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M KG
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 306
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+P+ T LI C + + A + K R+++ + E +Y L GLC+EG+ +A
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLDSAFEHRK-RMIQENIRLDEVAYTALXSGLCQEGRSVDA 365
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
K+ EM+ G +P Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 366 EKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM------QRDG 411
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 75/143 (52%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ + EM+ G +PD +Y+ L+ C+E + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAF 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY + G C+ G AE+ REM G++ + T+ ++N +
Sbjct: 332 EHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEF 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
C+ GDV + +M R G P
Sbjct: 392 CKKGDVWKGSKLLKEMQRDGHVP 414
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 24/183 (13%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + + + E+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM------------- 302
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
V ++P+ T+ L+ G +EG AFE + + E RL D +Y+ L +
Sbjct: 303 ---SVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRL----DEVAYTALXSG 355
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM ++ D Y II FC+ G++ + + +EM G S
Sbjct: 356 LCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 415
Query: 352 SVT 354
VT
Sbjct: 416 VVT 418
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 192/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGQGSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLD-----SDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYR 259
+ GY F + + + + V + +RP +FN LM G+ R
Sbjct: 124 YEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIR 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y+YSVL+ C+E +M A +L+ EM D + + V
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKVTYTTLIDGSCKEGDLETAFEYRK-RMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEM------QRDG 411
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ +D + G+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 308 --------KPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 201/415 (48%), Gaps = 40/415 (9%)
Query: 114 ILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY---RECGSAPFVFDLLIKCCLE 170
+L +R G R I +L P+ ++F++L++TY R+ A F L++ +
Sbjct: 59 LLRMSRRRGACRREIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVP 118
Query: 171 VKNIEKI------------ETCVDIVRMLMSRGLSVKVSTCNALI------WEVSRGKGV 212
+ D R++ S V T N ++ E + V
Sbjct: 119 IPAAASNALLAALSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAV 178
Query: 213 ISGYE---IYREVFG----LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYR 259
IS E ++ +V +D+ AG + +V ++P + T+N+++ G R
Sbjct: 179 ISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCR 238
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++K +V+ EM G PD S+++L+ FC + EA K+++EMR + ++ D+V+
Sbjct: 239 SGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVS 298
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
++ +IG F G+M A + REM G+ V + ++ G+CRAG + A+ V ++M
Sbjct: 299 FSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV 358
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
G P+ T L+ LC +RR+ +A +L + + G+ P ++ LI G C EGK+
Sbjct: 359 GCGCLPDVVTYNTLLNGLCKERRLLDAEGLLN-EMRERGVPPDLCTFTTLIHGYCIEGKL 417
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT-----MLRKEMFENQV 489
++AL++ M+ + P + Y+ IDG ++G+++ A M +E+F N V
Sbjct: 418 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV 472
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 164/355 (46%), Gaps = 27/355 (7%)
Query: 142 KLFEVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC 199
K +EV K + G AP V F +LI V IE+ + I + + RG+ + +
Sbjct: 244 KAWEVF-KEMDDFGVAPDVRSFTILIGGFCRVGEIEE---ALKIYKEMRHRGIKPDLVSF 299
Query: 200 NALIWEVSRGKGVISGYEIYREV--FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
+ LI +R + RE+ FGL D + ++ GF
Sbjct: 300 SCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV------------------IYTMVIGGF 341
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
R G V EM GC PD +Y+ L+ C+ERR+ +AE L EMR++ V D+
Sbjct: 342 CRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDL 401
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
+ T+I G+C G++ +A + F M + VT+ L++G CR GD+D A +++D
Sbjct: 402 CTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDD 461
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
M + P T +LI C+K +V +A L + K G+ P +Y +IKG C G
Sbjct: 462 MHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK-GILPNIMTYNSIIKGYCRSG 520
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ + K +M+ P L Y+ I GY+KE + A L M + +V+ +
Sbjct: 521 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 575
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 118/216 (54%), Gaps = 1/216 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+RP++ T+N L+ G R+G +K D+W +M P+ +YS+L+ CE+ ++ +A
Sbjct: 431 RLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 490
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+EM +K + +++ YN+II G+C G +++ ++F ++M ++ V +T+ L++G
Sbjct: 491 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 550
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
Y + + A + N M ++ +P+ T +LI V EA I + K G+ P
Sbjct: 551 YIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK-GIEP 609
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+YM +I G G +EA ++ EM+ +GF P
Sbjct: 610 DRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 136/305 (44%), Gaps = 40/305 (13%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C + +Y T+++ L + R + A ++ +R P L F L+ Y
Sbjct: 362 CLPDVVTYNTLLNGLCKERRLLDAEGLLN-EMRERGVPPDLCTFTTLIHGY--------- 411
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY- 219
C+E K++ + + ++++ L + T N LI + R + +++
Sbjct: 412 -------CIE----GKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWD 460
Query: 220 ----REVFG--------LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREG 261
RE+F +DS G +D + + PN+ T+N+++ G+ R G
Sbjct: 461 DMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSG 520
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
K + +M PD +Y+ L+ + +E +M +A KL M + V+ DVV YN
Sbjct: 521 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYN 580
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
+I GF G + A F +M G+E T+ ++NG+ AG+ A ++++M ++
Sbjct: 581 MLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 640
Query: 382 GFEPE 386
GF P+
Sbjct: 641 GFAPD 645
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P + +L+ + + R+ REA + + + D V A N ++ G A +
Sbjct: 84 PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADA 143
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+R + S E ++ T +V+ YC+A + D V ++M ++ P+ T V++
Sbjct: 144 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 203
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
A+ ++ + V K GL P +Y ++KGLC G ++A +V EM G P +
Sbjct: 204 AGDAEAAMALVDSMVSK-GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 262
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
++ I G+ + G +E A + KEM ++ +
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPD 295
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 217/472 (45%), Gaps = 30/472 (6%)
Query: 19 KPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIA 78
KP + S F+ +S P +++ V ++L+ R + + + L L ++I
Sbjct: 70 KPHISSHFAVPASREPFQA---IVSRVCAILS--RVQWKGSSELKQLSPQLKAHHVAEI- 123
Query: 79 LGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND 138
+ + + ++FF + + KH+++ + ++++ L R R+ PA + + +++ N+
Sbjct: 124 VAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNE 183
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKC---CLEVKNIEKIETCVDIVRMLMSRGLSVK 195
+++ + E F F L C +++ E +E ++ + +++ G+
Sbjct: 184 EEIRR---VADFLNEISGMGFGFSLY-SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPS 239
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
+ T N LI +S+ V I ++F D + P+V T+ +L++
Sbjct: 240 LLTFNTLINILSKKGKVREAELILSQIFQYD----------------LSPDVFTYTSLIL 283
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G R + V+ M + GC+P+ +YS L+ C E R+ EA + EEM +K +E
Sbjct: 284 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEP 343
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
V Y I C I A E M G + T+ L++G R G ++ AI +Y
Sbjct: 344 TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLY 403
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
+ M ++G P T LI ELC R AL I + G ++Y +IKGLC
Sbjct: 404 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW-MEGHGSLANTQTYNEIIKGLCL 462
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
G +E+A+ + +M+ G P++ Y+ I+GY+ +GNV A L M EN
Sbjct: 463 GGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN 514
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 123/257 (47%), Gaps = 23/257 (8%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
PNV ++NA++ G +E F + E + +MA G P+ +Y+ L+ C R + A K
Sbjct: 587 NPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFK 646
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ +M + ++ Y+++I G C+ G+ AE +EM G+ VTF L++G+
Sbjct: 647 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFV 706
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL---C--------------------DK 400
G +D A L+ M G +P T VL+ L C +K
Sbjct: 707 VLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEK 766
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
FE + L AR+ + G PT +Y L+ GLC +G+ EA ++ +M +GF P EI
Sbjct: 767 DVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREI 826
Query: 461 YSAFIDGYMKEGNVEMA 477
Y + + + K V+ A
Sbjct: 827 YYSLLIAHCKNLEVDHA 843
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 118/500 (23%), Positives = 213/500 (42%), Gaps = 51/500 (10%)
Query: 29 SSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLL--SLCRSGLTPTQFS--QIALGLKNN 84
+S PS + N + ++S + K R L+ + + L+P F+ + LG N
Sbjct: 233 NSGIQPSLLTFNTLINILS----KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 288
Query: 85 PHLALRFFSFTQH-KSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL 143
+L L F F + K C + +Y+T+I+ L + A D++ + +P +
Sbjct: 289 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI-EPTVYT 347
Query: 144 FEV----------------LVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVR 185
+ + LV ++ G P V + LI + + K+E + +
Sbjct: 348 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS---GLSRLGKLEVAIGLYH 404
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG----------IGK 235
++ GL T NALI E+ G + +I+ + G S A +G
Sbjct: 405 KMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGG 464
Query: 236 DVKRVVRV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
D+++ + + P V T+N L+ G+ +G + M GCEPD ++Y+
Sbjct: 465 DIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYN 524
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L++ F + ++ A ++EM + + + V+Y T+I G + G++ A M
Sbjct: 525 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEM 584
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G + ++ ++NG + A + + M +G P T LI LC R A
Sbjct: 585 GCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFA 644
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
I + K P +Y LI GLC+EGK +EA + EM KG P +++ ID
Sbjct: 645 FKIFH-DMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLID 703
Query: 467 GYMKEGNVEMATMLRKEMFE 486
G++ G ++ A +L + M +
Sbjct: 704 GFVVLGRIDHAFLLLRRMVD 723
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 124/268 (46%), Gaps = 25/268 (9%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN ++ L+ G ++G + + M +GC P+ SY+ ++ +E R EAE
Sbjct: 551 LNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAE 610
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+ ++M ++ + +V+ Y T+I G C G A + F +M + T+ L+ G
Sbjct: 611 KICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 670
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G D A ++ +M RKG P+ T LI R+ A +L+ R+V G P
Sbjct: 671 CQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLR-RMVDVGCKPN 729
Query: 423 EKSYMFLIKGLCEEG-KMEEALKVQAEMVGK-----------------------GFEPSL 458
++Y L+KGL +E +EE + VQ E V G EP+L
Sbjct: 730 YRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTL 789
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ YS + G ++G A L K+M E
Sbjct: 790 DTYSTLVSGLCRKGRFYEAEQLVKDMKE 817
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 1/227 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N L+ GF + G E + EM G P+ SY+ L+ ++ ++ A L
Sbjct: 518 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSL 577
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M + +V +YN +I G + + AE+ +M G+ + +T+ L++G CR
Sbjct: 578 LERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCR 637
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G A +++DM ++ P T LI LC + + EA +IL + + GL P E
Sbjct: 638 NGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA-EILLKEMERKGLAPDEV 696
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
++ LI G G+++ A + MV G +P+ YS + G KE
Sbjct: 697 TFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKE 743
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 110/241 (45%), Gaps = 25/241 (10%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM------AVFCEERRM 298
P+ TF +L+ GF G + + M +GC+P+ +YSVL+ + EE+
Sbjct: 693 PDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVA 752
Query: 299 REAEKLWE-EMRDKNVEHDVVA-----------------YNTIIGGFCEIGEMARAEEFF 340
+ E ++ +K+V ++V+ Y+T++ G C G AE+
Sbjct: 753 VQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLV 812
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
++M G + L+ +C+ +VD A+ +++ + KGF+ S LI LC
Sbjct: 813 KDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKA 872
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+V EA + + K E + L+ GL +EG+++ +K+ M K F P+++
Sbjct: 873 GQVEEAQALFDNMLEK-EWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQT 931
Query: 461 Y 461
Y
Sbjct: 932 Y 932
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
E+ R +F E+ G S + L+ + V+ A +Y M G +P T
Sbjct: 185 EIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFN 244
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
LI L K +V EA +++ +++ ++ L P +Y LI G C ++ A V MV
Sbjct: 245 TLINILSKKGKVREA-ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVK 303
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+G +P+ YS I+G EG V+ A + +EM E +
Sbjct: 304 EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 341
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + T++ L+ G R+G F + E + +M G PD Y L+ C+ + A K+
Sbjct: 787 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKI 846
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + K + + Y +I C+ G++ A+ F M + + + LV+G +
Sbjct: 847 FHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLK 906
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVL------IGELCDKRRVFEALDILK 411
G++D + + + M K F P T +L IG+ + + + L +LK
Sbjct: 907 EGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKVLK 959
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 132/243 (54%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+V PN TFN L+ GF ++ V+ EM G +P +Y+ L+ C E ++ EA
Sbjct: 298 KVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEA 357
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ L +EM N++ +V+ YN +I G+C+ + A E F +G G+ + +TF L++G
Sbjct: 358 KVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHG 417
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC+ G ++ A L+ M KGF P ST LI C + ++ E ++L + G+
Sbjct: 418 YCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCR-GVKA 476
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI CE+ + ++A ++ EM+ KG +PS Y+ ++GY EGN+ A LR
Sbjct: 477 DTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLR 536
Query: 482 KEM 484
K+M
Sbjct: 537 KQM 539
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 148/298 (49%), Gaps = 17/298 (5%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
E + + + + S+GL V T N+L+ G+ + ++ LD ++ +
Sbjct: 317 ENLSAALKVFEEMQSQGLKPTVVTYNSLV------NGLCNEGKLNEAKVLLDEMLSSNL- 369
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+PNV T+NAL+ G+ ++ E+ +++ + + G P+ +++ L+ +C+
Sbjct: 370 ---------KPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCK 420
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+M EA L + M +K + YN +I GFC G+M + EM GV++ +VT
Sbjct: 421 FGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVT 480
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L++ +C + A + ++M KG +P T +L+ C + + AL+ L+ ++
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALN-LRKQM 539
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
K G + +Y LI+G C +GK+E+A + EM+ KG P+ Y + M++G
Sbjct: 540 EKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG 597
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 128/273 (46%), Gaps = 33/273 (12%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++S L V T NALI + K + E RE+F IGK + PN
Sbjct: 364 MLSSNLKPNVITYNALINGYCKKKLL----EEARELFD-------NIGKQ-----GLTPN 407
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V TFN L+ G+ + G E+ + M G P+ +Y+ L+ FC E +M E + L
Sbjct: 408 VITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLN 467
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
EM+ + V+ D V YN +I +CE E +A EM G++ S +T+ L+NGYC G
Sbjct: 468 EMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEG 527
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++ +A+ + M ++G T VLI C K ++ +A +L + K GL P +Y
Sbjct: 528 NLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEK-GLIPNRTTY 586
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
++ EM+ KGF P +E
Sbjct: 587 EI----------------IKEEMMEKGFLPDIE 603
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 217/472 (45%), Gaps = 30/472 (6%)
Query: 19 KPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIA 78
KP + S F+ +S P +++ V ++L+ R + + + L L ++I
Sbjct: 28 KPHISSHFAVPASREPFQA---IVSRVCAILS--RVQWKGSSELKQLSPQLKAHHVAEI- 81
Query: 79 LGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND 138
+ + + ++FF + + KH+++ + ++++ L R R+ PA + + +++ N+
Sbjct: 82 VAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNE 141
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKC---CLEVKNIEKIETCVDIVRMLMSRGLSVK 195
+++ + E F F L C +++ E +E ++ + +++ G+
Sbjct: 142 EEIRR---VADFLNEISGMGFGFSLY-SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPS 197
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
+ T N LI +S+ V I ++F D + P+V T+ +L++
Sbjct: 198 LLTFNTLINILSKKGKVREAELILSQIFQYD----------------LSPDVFTYTSLIL 241
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G R + V+ M + GC+P+ +YS L+ C E R+ EA + EEM +K +E
Sbjct: 242 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEP 301
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
V Y I C I A E M G + T+ L++G R G ++ AI +Y
Sbjct: 302 TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLY 361
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
+ M ++G P T LI ELC R AL I + G ++Y +IKGLC
Sbjct: 362 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW-MEGHGSLANTQTYNEIIKGLCL 420
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
G +E+A+ + +M+ G P++ Y+ I+GY+ +GNV A L M EN
Sbjct: 421 GGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN 472
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 120/251 (47%), Gaps = 5/251 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN ++ AL+ G ++G + + M +GC P+ SY+ ++ +E R EAE
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAE 568
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+ ++M ++ + +V+ Y T+I G C G A + F +M + T+ L+ G
Sbjct: 569 KICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 628
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G D A M G EP T L+ LC K R +EA ++K + + G P
Sbjct: 629 CQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVK-DMKERGFCPD 683
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ Y L+ C+ +++ ALK+ + KGF+ L IY A I K G VE A L
Sbjct: 684 REIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFD 743
Query: 483 EMFENQVRQED 493
M E + ++
Sbjct: 744 NMLEKEWNADE 754
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 116/243 (47%), Gaps = 1/243 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPNV T+ AL+ G R G E ++ +M + G P+ +Y+ L+ C R A K
Sbjct: 335 RPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALK 394
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ M + YN II G C G++ +A F +M G + VT+ L+NGY
Sbjct: 395 IFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYL 454
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G+V++A + + M G EP+ T L+ K E+ +V+ GL P
Sbjct: 455 TKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF-SKWGKLESASFYFQEMVECGLNPNP 513
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
SY LI G ++GK++ AL + M G P++E Y+A I+G KE A + +
Sbjct: 514 VSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 573
Query: 484 MFE 486
M E
Sbjct: 574 MVE 576
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 119/500 (23%), Positives = 210/500 (42%), Gaps = 55/500 (11%)
Query: 29 SSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLL--SLCRSGLTPTQFS--QIALGLKNN 84
+S PS + N + ++S + K R L+ + + L+P F+ + LG N
Sbjct: 191 NSGIQPSLLTFNTLINILS----KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 246
Query: 85 PHLALRFFSFTQH-KSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL 143
+L L F F + K C + +Y+T+I+ L + A D++ + +P +
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI-EPTVYT 305
Query: 144 FEV----------------LVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVR 185
+ + LV ++ G P V + LI + + K+E + +
Sbjct: 306 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS---GLSRLGKLEVAIGLYH 362
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG----------IGK 235
++ GL T NALI E+ G + +I+ + G S A +G
Sbjct: 363 KMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGG 422
Query: 236 DVKRVVRV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
D+++ + + P V T+N L+ G+ +G + M GCEPD ++Y+
Sbjct: 423 DIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYN 482
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L++ F + ++ A ++EM + + + V+Y +I G + G++ A + M
Sbjct: 483 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM 542
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G + ++ ++NG + A + + M +G P T LI LC R A
Sbjct: 543 GCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFA 602
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
I + K P +Y LI GLC+EGK +EA M G EP+L+ YS +
Sbjct: 603 FKIFH-DMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVS 657
Query: 467 GYMKEGNVEMATMLRKEMFE 486
G ++G A L K+M E
Sbjct: 658 GLCRKGRFYEAEQLVKDMKE 677
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 5/233 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N L+ GF + G E + EM G P+ SY+ L+ ++ ++ A L
Sbjct: 476 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL 535
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + +V +YN +I G + + AE+ +M G+ + +T+ L++G CR
Sbjct: 536 LKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCR 595
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G A +++DM ++ P T LI LC + + EA R+ + G PT
Sbjct: 596 NGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA-----ERMSEIGCEPTLD 650
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y L+ GLC +G+ EA ++ +M +GF P EIY + + + K V+ A
Sbjct: 651 TYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHA 703
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 5/237 (2%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
PNV ++NA++ G +E F + E + +M G P+ +Y+ L+ C R + A K
Sbjct: 545 NPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFK 604
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ +M + ++ Y+++I G C+ G+ AE M G E + T+ LV+G C
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLC 660
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G A + DM +GF P+ L+ C V AL I + K G
Sbjct: 661 RKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAK-GFQLHL 719
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
Y LI LC+ G++EEA + M+ K + +++ +DG +KEG +++ L
Sbjct: 720 SIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKL 776
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 168/374 (44%), Gaps = 39/374 (10%)
Query: 104 SLSSYATIIH-ILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECG---SAPF 159
++ +Y T+I+ L++ + AR + ++ +P + LV + + G SA F
Sbjct: 442 TVVTYNTLINGYLTKGNVNNAAR--LLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 499
Query: 160 VFDLLIKCCLEVKNIE------------KIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
F +++C L + K++ + +++ + G + V + NA+I +S
Sbjct: 500 YFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLS 559
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
+ S+A K V++ + PNV T+ L+ G R G +
Sbjct: 560 KENRF--------------SEAEKICDKMVEQ--GLLPNVITYTTLIDGLCRNGRTQFAF 603
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
++ +M + C P+ Y+YS L+ C+E + EAE+ M + E + Y+T++ G
Sbjct: 604 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGL 659
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C G AE+ ++M G + L+ +C+ +VD A+ +++ + KGF+
Sbjct: 660 CRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHL 719
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
S LI LC +V EA + + K E + L+ GL +EG+++ +K+
Sbjct: 720 SIYRALICALCKAGQVEEAQALFDNMLEK-EWNADEIVWTVLVDGLLKEGELDLCMKLLH 778
Query: 448 EMVGKGFEPSLEIY 461
M K F P+++ Y
Sbjct: 779 IMESKNFTPNIQTY 792
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 45/208 (21%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN++T+++L+ G +EG ++ E M+ +GCEP +YS L++ C + R EAE+L
Sbjct: 616 PNLYTYSSLIYGLCQEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQL 671
Query: 305 WEEMRD------------------KNVE--------HDVVA---------YNTIIGGFCE 329
++M++ KN+E H + A Y +I C+
Sbjct: 672 VKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCK 731
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G++ A+ F M + + + LV+G + G++D + + + M K F P T
Sbjct: 732 AGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQT 791
Query: 390 IEVL------IGELCDKRRVFEALDILK 411
+L IG+ + + + L +LK
Sbjct: 792 YVILGRELSRIGKSIESEPLADKLKVLK 819
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
E+ R +F E+ G S + L+ + V+ A +Y M G +P T
Sbjct: 143 EIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFN 202
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
LI L K +V EA +++ +++ ++ L P +Y LI G C ++ A V MV
Sbjct: 203 TLINILSKKGKVREA-ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVK 261
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+G +P+ YS I+G EG V+ A + +EM E +
Sbjct: 262 EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 299
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 184/393 (46%), Gaps = 20/393 (5%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+H+L SY T+IH+L +++ A+ +I+V + D +FE +++T S +VF
Sbjct: 10 RHTLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQRSDFYVF 69
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
L+ LE + C R+ + V TC ++ + + ++ Y+E
Sbjct: 70 SGLMIAYLESGFVRDAVQCF---RLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKE 126
Query: 222 VFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
V A+ ++ FN LM F +EG + V+ + + G P
Sbjct: 127 VLECGYPAS----------------LYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPS 170
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
S++ L+ + + + E +L M + DV Y+ +I G C+ G++ A E F
Sbjct: 171 VVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFN 230
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM +G+ + VTF L++G+C+ VD A+ +Y M +G P+ T LI LC K
Sbjct: 231 EMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKG 290
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ + D++ ++ GL P + SY LI G C+EG +E AL+++ +M+ + Y
Sbjct: 291 ELKQVHDLIDEMIMN-GLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAY 349
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A I +EG A + +EM ++ ++G
Sbjct: 350 TALISCLCREGRASDAEKMLREMLSVGLKPDNG 382
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
EK++ ++I + ++S+GLS + T N LI+ + + + +++ E+
Sbjct: 255 EKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMI----------- 303
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+ ++P+ ++ L+ G +EG E ++ +M + D +Y+ L++ C
Sbjct: 304 -----MNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCR 358
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E R +AEK+ EM ++ D Y II FC+ + A + REM G VT
Sbjct: 359 EGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLPGVVT 418
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 191/405 (47%), Gaps = 23/405 (5%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+VF LI LE + C R+ V TC +I + + K +
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGF 123
Query: 219 YREVFGLDSDAT----------------AGIGKDVKRVVR---VRPNVHTFNALMVGFYR 259
Y E A+ + + V + +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ + M G +PD Y++SVL+ C+E +M +A +L++EM B + + V
Sbjct: 184 IGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +R+M + +T+ L+ G C+ GD+ + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K R++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRK-RMIKENIRLDDXAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+A K+ EM+ G +P + Y+ I+ + K+G+V + L KEM
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++ D+ EM+ G +PD +Y+ L+ C+E + A +
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEY 333
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D AY +I G C+ G AE+ REM G++ T+ ++N +C+
Sbjct: 334 RKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCK 393
Query: 365 AGDVDSAILVYNDMCRKGFEPEGST 389
GDV + + +M R G+ P T
Sbjct: 394 KGDVWTGSKLLKEMQRXGYXPNXVT 418
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I R ++S+ L + T N LI+ + + + ++ +D + G+
Sbjct: 256 RVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G + VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPNXVT 418
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/515 (22%), Positives = 218/515 (42%), Gaps = 97/515 (18%)
Query: 42 IATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLC 101
I+T+ LL S W+ L R+ P F + L LRFF ++Q +
Sbjct: 20 ISTISELL----SNQHWSELKPHFRT-TKPAIFLDQLFNAGVDSELVLRFFQWSQKEFRI 74
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+ L + ++H+L+ ++ R + +++ ++ +L+ R C +A +
Sbjct: 75 SYGLETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANA-LIT 133
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
D+L+ V N+E I + ++ R + G + +++CN L+ + +G +Y+E
Sbjct: 134 DMLV--LAYVTNLE-IHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKE 190
Query: 222 VFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
+ +KR R++PN+ TFN + G + G K EDV ++ G P+
Sbjct: 191 M--------------IKR--RIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPN 234
Query: 282 CYSYSVLMAVFCEER---RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+Y+ L+ C++ +M A+ + +EM + + + +NT+I GFC+ + A+
Sbjct: 235 IVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKN 294
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F EM G++ + VT+ L+NG G +D AI +++ M G +P T LI C
Sbjct: 295 AFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFC 354
Query: 399 DKRRVFEALDI----------------------------------LKARVVKFGLFPTEK 424
K+ + EA + L ++ G+FP
Sbjct: 355 KKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVS 414
Query: 425 SYMFLIKGL-----------------------------------CEEGKMEEALKVQAEM 449
+Y LI GL C++G+ +A K+ EM
Sbjct: 415 TYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEM 474
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ G +P+ Y+ +DGY EGN++ A +R +M
Sbjct: 475 LNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQM 509
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 181/383 (47%), Gaps = 35/383 (9%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
+L+++ I+ L +A + A DVI +++ P + + L+ + + GSA
Sbjct: 199 NLTTFNIFINGLCKAGKLNKAEDVIE-DIKAWGFSPNIVTYNTLIDGHCKKGSAG----- 252
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
K+ I++ +++ + T N LI + + V++ + E+
Sbjct: 253 ------------KMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEM- 299
Query: 224 GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
+ ++PN+ T+N+L+ G G ++ +W +M LG +P+
Sbjct: 300 ---------------QRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIV 344
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+++ L+ FC+++ ++EA KL++++ ++++ + + +NT+I FC+ G M M
Sbjct: 345 TFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSM 404
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G+ + T+ L+ G CR +V +A + N+M + + T +LIG C
Sbjct: 405 LDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEP 464
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
+A +L ++ G+ P +Y L+ G C EG ++ ALKV+ +M +G ++ Y+
Sbjct: 465 SKAEKLL-GEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNV 523
Query: 464 FIDGYMKEGNVEMATMLRKEMFE 486
I G+ K G +E A L EM E
Sbjct: 524 LIKGFCKTGKLEDANRLLNEMLE 546
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 52/291 (17%)
Query: 171 VKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDAT 230
+ N K++ + + ++ GL + T NALI + K + +++ ++ D
Sbjct: 318 LSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQD---- 373
Query: 231 AGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
+ PN TFN ++ F + G E+ + M G P+ +Y+ L+A
Sbjct: 374 ------------LVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIA 421
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C + +R A+KL EM + ++ DVV YN +IGG+C+ GE ++AE+ EM GV+
Sbjct: 422 GLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKP 481
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ VT+ L++GYC G++ +A+ V R E EG
Sbjct: 482 NHVTYNTLMDGYCMEGNLKAALKV-----RTQMEKEGK---------------------- 514
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+A VV +Y LIKG C+ GK+E+A ++ EM+ KG P+ Y
Sbjct: 515 RANVV---------TYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY 556
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 117/233 (50%), Gaps = 15/233 (6%)
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
F +V+D +++ C P L++ + E + +++EM + ++ ++ +N
Sbjct: 153 FRRVQDYGFKLSLNSCNP-------LLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNI 205
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR---AGDVDSAILVYNDMC 379
I G C+ G++ +AE+ ++ G + VT+ L++G+C+ AG + A + +M
Sbjct: 206 FINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEML 265
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
P T LI C V A + + + + GL P +Y LI GL GK+
Sbjct: 266 ANKICPNEITFNTLIDGFCKDENVLAAKNAFE-EMQRQGLKPNIVTYNSLINGLSNNGKL 324
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+EA+ + +MVG G +P++ ++A I+G+ K+ ++ A +++F++ Q+
Sbjct: 325 DEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEA----RKLFDDIAEQD 373
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 198/425 (46%), Gaps = 31/425 (7%)
Query: 91 FFSF--TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ + S +H+L SY +IH L ++ A+ +I+V + +F ++
Sbjct: 3 FFTWLSSPANSTFRHTLHSYCAMIHFLCSHQMFSEAKSLIQVVVSRKGKGSASAVFAAIL 62
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+T S +VF LI LE+ + +D R+ V TC ++ + +
Sbjct: 63 ETKGTQRSDIYVFSGLITAYLELGFLRD---AIDCYRLTREHKFCVPFDTCRKVLEHLMK 119
Query: 209 GKGVISGYEIYREVFGLDSDAT----------------AGIGKDVKRVVR---VRPNVHT 249
K + Y E+ A+ + + V + +RP+V +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N LM G+ R G ++ + M G PD Y+YSVL+ C+E +M +A KL++EM
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEML 239
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+K + + V + T+I G C+ G + A E +++M + VT+ L+ G C+ GD+
Sbjct: 240 EKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLK 299
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + ++M G +P+ T LI C + + A + K +++ + + +Y L
Sbjct: 300 QAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKM-MIQENIRLDDVAYTAL 358
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I GLC+EG+ +A K+ EM+ G +P Y+ I+ + K+G+V + L KEM
Sbjct: 359 ISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEM----- 413
Query: 490 RQEDG 494
Q DG
Sbjct: 414 -QRDG 417
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 81/150 (54%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+NAL+ G ++G ++ D+ EM+ G +PD +Y+ L+ C+E + A +
Sbjct: 280 PDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEH 339
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C+ G AE+ REM G++ + T+ ++N +C+
Sbjct: 340 RKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCK 399
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 400 KGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 24/189 (12%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
++ ++I + ++S+ L + T NALI+ + + + +++ E+
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEM-------------- 308
Query: 237 VKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+ ++P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 309 --SMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRL----DDVAYTALISGL 362
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C+E R +AEK+ EM ++ D Y II FC+ G++ + + +EM G S
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 422
Query: 353 VTFEHLVNG 361
VT+ L+NG
Sbjct: 423 VTYNVLMNG 431
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 27/356 (7%)
Query: 158 PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
P VFDLLI+ + + K + R+L+ + V S NAL+ +SR E
Sbjct: 87 PQVFDLLIRTYTQSR---KPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQE 143
Query: 218 IYREVFGLDSDATAGI---------------GKDV------KRVVRVRPNVHTFNALMVG 256
YR V DS+ A G D KR V P+V T N L+
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVF--PDVVTHNVLIDA 201
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
+R G + + MA G +P +Y+ ++ C+ RR +A++++ M +V D
Sbjct: 202 RFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPD 261
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
V ++N +IGGFC +GE+ A +F++EM V V+F L+ + R G++D A
Sbjct: 262 VRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLR 321
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
+M G P+G ++IG C + EAL + + +V FG P +Y L+ GLC++
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV-RDEMVGFGCLPDVVTYNTLLNGLCKQ 380
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
++ +A K+ EM +G P L ++ I GY ++GN E A L + ++R +
Sbjct: 381 HRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPD 436
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 135/247 (54%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P + T+N+++ G + F+K ++V+ M + PD S+++L+ FC ++EA
Sbjct: 223 LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAV 282
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K ++EM+ + V DVV+++ +IG F GEM A + REM G+ V + ++ G+
Sbjct: 283 KFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGF 342
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRAG + A+ V ++M G P+ T L+ LC + R+ +A +L + + G+ P
Sbjct: 343 CRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLN-EMEERGVTPD 401
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ LI G C +G E AL++ ++ + P + Y++ IDG ++G++ A L
Sbjct: 402 LCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWD 461
Query: 483 EMFENQV 489
+M ++
Sbjct: 462 DMHAREI 468
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 159/342 (46%), Gaps = 26/342 (7%)
Query: 149 KTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
+T +C AP V F++LI V +++ V + + R ++ V + + LI
Sbjct: 251 RTMDQCSVAPDVRSFNILIGGFCRVGEVKE---AVKFYKEMQHRYVTPDVVSFSCLIGLF 307
Query: 207 SRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
SR + RE+ GL + P+ + ++ GF R G+ +
Sbjct: 308 SRRGEMDHAGAYLREMKGLG----------------LVPDGVIYTMVIGGFCRAGSMSEA 351
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
V EM GC PD +Y+ L+ C++ R+ +AEKL EM ++ V D+ + T+I G
Sbjct: 352 LRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHG 411
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
+C G A + F + + VT+ L++G CR GD+ A +++DM + P
Sbjct: 412 YCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPN 471
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T +LI C+K +V +A L +VK G P ++Y +IKG C G +++ +
Sbjct: 472 HITYSILIDSHCEKGQVEDAFGFLD-EMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFL 530
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA----TMLRKEM 484
+M P L ++ I GY+KE N+ A ++ KEM
Sbjct: 531 QKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 115/222 (51%), Gaps = 13/222 (5%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+RP+V T+N+L+ G R+G K ++W +M P+ +YS+L+ CE+ ++ +A
Sbjct: 432 RLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDA 491
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+EM K ++ YN+II G+C G + + ++F ++M V +TF L++G
Sbjct: 492 FGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHG 551
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFEALDILKARVV 415
Y + ++ A V+N M ++ P+ T ++I G + D RVF+ +
Sbjct: 552 YIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMG------- 604
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
G+ P +YM LI G G ++A ++ EM+ +GF P
Sbjct: 605 DSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 7/254 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P++ TF L+ G+ R+G FE ++ + R PD +Y+ L+ C + + +A
Sbjct: 398 VTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKAN 457
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+LW++M + + + + Y+ +I CE G++ A F EM G + T+ ++ GY
Sbjct: 458 ELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGY 517
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV---FEALDILKARVVKFGL 419
CR+G+V M + P+ T LI + + F +I++ +V+
Sbjct: 518 CRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVR--- 574
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y +I G E+G M++A +V M G EP Y + I+G++ GN + A
Sbjct: 575 -PDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQ 633
Query: 480 LRKEMFENQVRQED 493
L EM +D
Sbjct: 634 LHDEMIHRGFAPDD 647
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 36/240 (15%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P + +L+ + + R+ REA + + + D V A N ++ G A+E
Sbjct: 85 PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEA 144
Query: 340 FREMGLSGVESSSVTFEHLVNGYC-----------------------------------R 364
+R + S E ++ T +V+ YC R
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AGDVD+AI + + M +G +P T ++ LC RR +A ++ + + + + P +
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRT-MDQCSVAPDVR 263
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
S+ LI G C G+++EA+K EM + P + +S I + + G ++ A +EM
Sbjct: 264 SFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREM 323
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 189/403 (46%), Gaps = 29/403 (7%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
+L SY T+IH+L +++ A+ +I+V + +F +++T S +VF
Sbjct: 1 TLDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 60
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
LI LE + C + R V TC ++ + + K + Y E+
Sbjct: 61 LITAYLESGFLRDAXECYRLTR---EHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 117
Query: 224 GLDSDAT----------------AGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFE 264
A+ + + V + +RP+V +FN LM G+ R G +
Sbjct: 118 ECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMD 177
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ + M G +PD Y+YSVL+ C+E +M +A ++++EM DK + + V + T+I
Sbjct: 178 EGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLI 237
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M KG +
Sbjct: 238 DGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK 297
Query: 385 PEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
P+ T LI C D FE + R+++ + + +Y LI GLC+E + +
Sbjct: 298 PDKITYTTLIDGCCKEGDLETAFEH----RKRMIQEXIRLDDVAYTALISGLCQEERYLD 353
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
A KV EM+ G +P Y+ I+ + K+G+V + L KEM
Sbjct: 354 AEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM 396
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 106/250 (42%), Gaps = 44/250 (17%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY-SYSVLMAVFCEERRMREAE 302
R +++ F+ L+ + G + + RL E + + V +++ +
Sbjct: 52 RSDIYVFSGLITAYLESGFLRDAXECY----RLTREHKFWVPFDTCRKVLEHLMKLKYFK 107
Query: 303 KLW---EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+W EE+ + + +N ++ FC+ G++ A+ F + G+ S V+F L+
Sbjct: 108 LVWGFYEEILECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLM 167
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
NGY R GD+D + N M G +P+ T
Sbjct: 168 NGYIRLGDMDEGFRLKNAMHASGVQPDVYT------------------------------ 197
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
Y LI GLC+E KM++A ++ EM+ KG P+ ++ IDG+ K G V++A
Sbjct: 198 ------YSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAME 251
Query: 480 LRKEMFENQV 489
+ K+M +
Sbjct: 252 IYKQMLSQSL 261
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATA-- 231
+++ ++I + ++S+ L + T N LI+ + + + +++ E+ GL D
Sbjct: 245 RVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYT 304
Query: 232 ----GIGKD---------VKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
G K+ KR+++ +R + + AL+ G +E + E V EM +
Sbjct: 305 TLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSV 364
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
G +PD +Y++++ FC++ + KL +EM+
Sbjct: 365 GLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ 397
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 182/362 (50%), Gaps = 24/362 (6%)
Query: 145 EVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
E L+ TY++ GS P VFD+ + +E + + D L++ G+++ +CN +
Sbjct: 26 ERLIYTYKDWGSDPHVFDVFFQVLVEAGLLNEARKFFD---KLLNYGVALSAGSCNLYLT 82
Query: 205 EVSRGKGVISG-YEIYREVFGL----DSDATAGIGKDVKRVVRVR--------------- 244
+S + ++ +++ E L ++++ + + R+ ++R
Sbjct: 83 CLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCI 142
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V ++ ++ G+ G +KV + EM G +P+ Y+YS ++ + C+ ++ E EK+
Sbjct: 143 PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKV 202
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM + V D V Y T+I GFC++G A + F EM + S+ F L+ G
Sbjct: 203 LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSG 262
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G V A ++N+M +KGFEP+ T LI C + +A L ++V+ GL P
Sbjct: 263 SGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAF-FLHNQMVQIGLTPNVV 321
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L GLC+ G+++ A ++ EM KG + ++ Y+ ++G K GN+ A L +EM
Sbjct: 322 TYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEM 381
Query: 485 FE 486
E
Sbjct: 382 KE 383
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 162/317 (51%), Gaps = 17/317 (5%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
++ +++ V +V+ + +GL + T +++I + + V+ G ++ RE+
Sbjct: 157 HVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREM---------- 206
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+KR V P+ + L+ GF + G + ++ EM PD ++S L+
Sbjct: 207 ----MKR--GVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGL 260
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
++ EA+KL+ EM K E D V Y +I G+C++GEM +A +M G+ +
Sbjct: 261 SGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNV 320
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ L +G C++G++D+A + ++MCRKG + ST ++ LC + +A+ +++
Sbjct: 321 VTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLME- 379
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ + GL P +Y L+ + G+M +A ++ EM+ +G +P++ ++ ++G G
Sbjct: 380 EMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSG 439
Query: 473 NVEMATMLRKEMFENQV 489
+E L K M E +
Sbjct: 440 KLEDGERLLKWMLEKGI 456
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 125/244 (51%), Gaps = 1/244 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ + PNV T+ AL G + G + ++ EM R G + + +Y+ ++ C+ + +
Sbjct: 314 IGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQ 373
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A KL EEM++ + D + Y T++ + + GEM +A E REM G++ + VTF L+N
Sbjct: 374 AVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMN 433
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C +G ++ + M KG P +T ++ + C + + + +I + + G+
Sbjct: 434 GLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQ-GVV 492
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y LIKG C+ M+EA + EMV K F + Y+A I G+ K + A L
Sbjct: 493 PDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQL 552
Query: 481 RKEM 484
+EM
Sbjct: 553 FEEM 556
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 101/227 (44%), Gaps = 19/227 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV-----------FG 224
+++T +++ + +GL + +ST N ++ + + ++ ++ E+ +
Sbjct: 335 ELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYT 394
Query: 225 LDSDATAGIGKDVK--RVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
DA G+ VK ++R ++P V TFN LM G G E E + M
Sbjct: 395 TLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEK 454
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G P+ +Y+ +M +C MR + +++ M + V D YN +I G C+ M A
Sbjct: 455 GIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEA 514
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
+EM ++ ++ L+ G+ + + A ++ +M R+G
Sbjct: 515 WFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGL 561
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 94/209 (44%), Gaps = 32/209 (15%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
+++R ++ RGL V T N L ++ +G +D +R++
Sbjct: 411 ELLREMLDRGLQPTVVTFNVL----------------------MNGLCMSGKLEDGERLL 448
Query: 242 R------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ + PN T+N++M + +++ M G PD +Y++L+ C+
Sbjct: 449 KWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKA 508
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R M+EA L +EM +K +YN +I GF + ++ A + F EM G+ +S+ +
Sbjct: 509 RNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIY 568
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
V+ G++++ + ++C + E
Sbjct: 569 NLFVDMNYEEGNMETTL----ELCDEAIE 593
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL-VYNDMCRKGFEPEG 387
E G + A +FF ++ GV S+ + + D+ +L V+++ + G
Sbjct: 51 EAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNT 110
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+ +L+ L ++ EA +L K G P SY +I G C G++++ +++
Sbjct: 111 ESYNILMNSLFRLGKIREAHHLLMRMEFK-GCIPDVVSYTTIIDGYCHVGELQKVVQLVK 169
Query: 448 EMVGKGFEPSLEIYSAFI-----DGYMKEGNVEMATMLRKEMFENQV 489
EM KG +P+L YS+ I G + EG + M+++ +F + V
Sbjct: 170 EMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHV 216
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 201/414 (48%), Gaps = 42/414 (10%)
Query: 115 LSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY---RECGSAPFVFDLLIKCCLEV 171
+SR R G R I +L P+ ++F++L++TY R+ A F L++ + +
Sbjct: 1 MSRRR--GACRREIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPI 58
Query: 172 KNIEKI------------ETCVDIVRMLMSRGLSVKVSTCNALI------WEVSRGKGVI 213
D R++ S V T N ++ E + VI
Sbjct: 59 PAAASNALLAALSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVI 118
Query: 214 SGYE---IYREVFG----LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYRE 260
S E ++ +V +D+ AG + +V ++P + T+N+++ G R
Sbjct: 119 SEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRS 178
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G ++K +V+ EM G PD S+++L+ FC + EA K+++EMR + ++ D+V++
Sbjct: 179 GMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSF 238
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
+ +IG F G+M A + REM G+ V + ++ G+CRAG + A+ V ++M
Sbjct: 239 SCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVG 298
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
G P+ T L+ LC +RR+ +A +L + + G+ P ++ LI G C EGK++
Sbjct: 299 CGCLPDVVTYNTLLNGLCKERRLLDAEGLLN-EMRERGVPPDLCTFTTLIHGYCIEGKLD 357
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT-----MLRKEMFENQV 489
+AL++ M+ + P + Y+ IDG ++G+++ A M +E+F N V
Sbjct: 358 KALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV 411
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 164/355 (46%), Gaps = 27/355 (7%)
Query: 142 KLFEVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC 199
K +EV K + G AP V F +LI V IE+ + I + + RG+ + +
Sbjct: 183 KAWEVF-KEMDDFGVAPDVRSFTILIGGFCRVGEIEE---ALKIYKEMRHRGIKPDLVSF 238
Query: 200 NALIWEVSRGKGVISGYEIYREV--FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
+ LI +R + RE+ FGL D + ++ GF
Sbjct: 239 SCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV------------------IYTMVIGGF 280
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
R G V EM GC PD +Y+ L+ C+ERR+ +AE L EMR++ V D+
Sbjct: 281 CRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDL 340
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
+ T+I G+C G++ +A + F M + VT+ L++G CR GD+D A +++D
Sbjct: 341 CTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDD 400
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
M + P T +LI C+K +V +A L + K G+ P +Y +IKG C G
Sbjct: 401 MHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK-GILPNIMTYNSIIKGYCRSG 459
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ + K +M+ P L Y+ I GY+KE + A L M + +V+ +
Sbjct: 460 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 514
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 117/214 (54%), Gaps = 1/214 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+RP++ T+N L+ G R+G +K D+W +M P+ +YS+L+ CE+ ++ +A
Sbjct: 370 RLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 429
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+EM +K + +++ YN+II G+C G +++ ++F ++M ++ V +T+ L++G
Sbjct: 430 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 489
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
Y + + A + N M ++ +P+ T +LI V EA I + K G+ P
Sbjct: 490 YIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK-GIEP 548
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
+YM +I G G +EA ++ EM+ +G E
Sbjct: 549 DRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKE 582
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P + +L+ + + R+ REA + + + D V A N ++ G A +
Sbjct: 23 PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADA 82
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+R + S E ++ T +V+ YC+A + D V ++M ++ P+ T V++
Sbjct: 83 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 142
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
A+ ++ + V K GL P +Y ++KGLC G ++A +V EM G P +
Sbjct: 143 AGDAEAAMALVDSMVSK-GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 201
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
++ I G+ + G +E A + KEM ++ +
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPD 234
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 115/277 (41%), Gaps = 42/277 (15%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
AL+ F ++ L + + +Y T+I + R + A D+ + S E P + +L
Sbjct: 359 ALQLFDTMLNQRL-RPDIVTYNTLIDGMCRQGDLDKANDLWD-DMHSREIFPNHVTYSIL 416
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
+ ++ E G ++E + ++++G+ + T N++I
Sbjct: 417 IDSHCEKG--------------------QVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 456
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
R V G + +++ V +V P++ T+N L+ G+ +E
Sbjct: 457 RSGNVSKGQKFLQKMM----------------VNKVSPDLITYNTLIHGYIKEDKMHDAF 500
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
+ M + +PD +Y++L+ F ++EA ++E+M K +E D Y ++I G
Sbjct: 501 KLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGH 560
Query: 328 CEIGEMARAEEFFREMGLSGVE----SSSVTFEHLVN 360
G A + EM G E + +V F ++ N
Sbjct: 561 VTAGNSKEAFQLHDEMLQRGKEKRRAAGTVQFVNIQN 597
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 223/494 (45%), Gaps = 78/494 (15%)
Query: 64 LCRSGLTP------------TQFSQIALGLKNNPHLA-LRFFSFTQHKSLCKHSLSSYAT 110
+ +SGL P ++ Q+ L N P + LRFF F + K L ++
Sbjct: 14 ILKSGLQPFKTTPSLLSNFDSRVMQLVLSDPNLPTRSCLRFFDFLRQNPSRKPDLPAHLI 73
Query: 111 IIHILSRARLIGPARDVIRVALRSPE----------------NDPKL--KLFEVLVKTY- 151
+ L RAR ++V++ + N+P + K ++L + Y
Sbjct: 74 LFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVEKFCDMLFRVYM 133
Query: 152 --RECGSAPFVFDLLIK--------CCLE----VKNIEKIETCVDIVRMLMSRGLSVKVS 197
R S+ VFD K C E +K +E CV+ +R ++ G+ ++V
Sbjct: 134 DNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVC 193
Query: 198 TCNALI------WEVSRGKGV-------------------ISGYEIYREVFGLDSDATAG 232
+ A++ EV R K + ++GY ++V G++ + +
Sbjct: 194 SWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVN-EILSL 252
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+ K+V V NV T+ L+ + R E+ E ++ EM + G EPD Y Y+ ++
Sbjct: 253 MEKNV-----VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWN 307
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C+ M+ A L++EM ++ + + Y +I G C+ GEM AE +M GV+ +
Sbjct: 308 CKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNR 367
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
V F L++GYC+ G +D A+ + N M +KGFE + T ++ C R EA +L
Sbjct: 368 VIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLT 427
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ + G+ P S+ LI C+E EA ++ M KG PS+ Y+AFI+ Y K+G
Sbjct: 428 -MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKG 486
Query: 473 NVEMATMLRKEMFE 486
+E A L EM E
Sbjct: 487 KMEEAYKLINEMQE 500
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 9/239 (3%)
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
G DV RV+ FN LM G+ ++G ++ + M + G E D ++ +++ + FC
Sbjct: 362 GVDVNRVI--------FNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFC 413
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
R EA++L M ++ V +VV+++ +I +C+ A A F+ M G S V
Sbjct: 414 RSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVV 473
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ + YC+ G ++ A + N+M +G P+ T LI V AL++
Sbjct: 474 TYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFN-E 532
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ + GL +Y +I GL ++G+ +EA K+ EM +G P IYS+ I K G
Sbjct: 533 MPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 591
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 7/207 (3%)
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+L V+ + R + ++++ R K E D + + G M EF R+M
Sbjct: 126 DMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVD 185
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG---ELCDKRR 402
SG+E ++ +V+G C+ G+V A + +++ KGF+P T L+ E+ D
Sbjct: 186 SGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGG 245
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
V E L +++ VV + + +Y LI+ K+EEA K+ EM+ KG EP + IY+
Sbjct: 246 VNEILSLMEKNVVDYNV----TTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYT 301
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQV 489
+ I+ K GN++ A +L EM E ++
Sbjct: 302 SIINWNCKFGNMKRAFVLFDEMTERRL 328
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+NA + + ++G E+ + EM G PD Y+Y+ L+ + A +L
Sbjct: 470 PSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALEL 529
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM + +VV Y II G + G A + + EM G+ + L+ +
Sbjct: 530 FNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 589
Query: 365 AGDVDSAI 372
G + S +
Sbjct: 590 VGPLVSGL 597
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 89/194 (45%), Gaps = 21/194 (10%)
Query: 147 LVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
L+ T E G AP V F +LI + +N + + +++ +G + V T NA I
Sbjct: 424 LLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARR---LFKVMEKKGKAPSVVTYNAFIE 480
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ + Y++ E+ G+ P+ +T+ +L+ G G +
Sbjct: 481 RYCKKGKMEEAYKLINEM------QERGL----------MPDTYTYTSLIDGERASGNVD 524
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ +++ EM +LG + +Y+V+++ ++ R EA KL++EM + + D Y+++I
Sbjct: 525 RALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 584
Query: 325 GGFCEIGEMARAEE 338
++G + E
Sbjct: 585 ASLHKVGPLVSGLE 598
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 223/494 (45%), Gaps = 78/494 (15%)
Query: 64 LCRSGLTP------------TQFSQIALGLKNNPHLA-LRFFSFTQHKSLCKHSLSSYAT 110
+ +SGL P ++ Q+ L N P + LRFF F + K L ++
Sbjct: 10 ILKSGLQPFKTTPSLLSNFDSRVMQLVLSDPNLPTRSCLRFFDFLRQNPSRKPDLPAHLI 69
Query: 111 IIHILSRARLIGPARDVIRVALRSPE----------------NDPKL--KLFEVLVKTY- 151
+ L RAR ++V++ + N+P + K ++L + Y
Sbjct: 70 LFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVEKFCDMLFRVYM 129
Query: 152 --RECGSAPFVFDLLIK--------CCLE----VKNIEKIETCVDIVRMLMSRGLSVKVS 197
R S+ VFD K C E +K +E CV+ +R ++ G+ ++V
Sbjct: 130 DNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVC 189
Query: 198 TCNALI------WEVSRGKGV-------------------ISGYEIYREVFGLDSDATAG 232
+ A++ EV R K + ++GY ++V G++ + +
Sbjct: 190 SWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVN-EILSL 248
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+ K+V V NV T+ L+ + R E+ E ++ EM + G EPD Y Y+ ++
Sbjct: 249 MEKNV-----VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWN 303
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C+ M+ A L++EM ++ + + Y +I G C+ GEM AE +M GV+ +
Sbjct: 304 CKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNR 363
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
V F L++GYC+ G +D A+ + N M +KGFE + T ++ C R EA +L
Sbjct: 364 VIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLT 423
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ + G+ P S+ LI C+E EA ++ M KG PS+ Y+AFI+ Y K+G
Sbjct: 424 -MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKG 482
Query: 473 NVEMATMLRKEMFE 486
+E A L EM E
Sbjct: 483 KMEEAYKLINEMQE 496
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 9/239 (3%)
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
G DV RV+ FN LM G+ ++G ++ + M + G E D ++ +++ + FC
Sbjct: 358 GVDVNRVI--------FNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFC 409
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
R EA++L M ++ V +VV+++ +I +C+ A A F+ M G S V
Sbjct: 410 RSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVV 469
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ + YC+ G ++ A + N+M +G P+ T LI V AL++
Sbjct: 470 TYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFN-E 528
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ + GL +Y +I GL ++G+ +EA K+ EM +G P IYS+ I K G
Sbjct: 529 MPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 587
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 7/207 (3%)
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+L V+ + R + ++++ R K E D + + G M EF R+M
Sbjct: 122 DMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVD 181
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG---ELCDKRR 402
SG+E ++ +V+G C+ G+V A + +++ KGF+P T L+ E+ D
Sbjct: 182 SGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGG 241
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
V E L +++ VV + + +Y LI+ K+EEA K+ EM+ KG EP + IY+
Sbjct: 242 VNEILSLMEKNVVDYNV----TTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYT 297
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQV 489
+ I+ K GN++ A +L EM E ++
Sbjct: 298 SIINWNCKFGNMKRAFVLFDEMTERRL 324
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+NA + + ++G E+ + EM G PD Y+Y+ L+ + A +L
Sbjct: 466 PSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALEL 525
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM + +VV Y II G + G A + + EM G+ + L+ +
Sbjct: 526 FNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 585
Query: 365 AGDVDSAI 372
G + S +
Sbjct: 586 VGPLVSGL 593
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 89/194 (45%), Gaps = 21/194 (10%)
Query: 147 LVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
L+ T E G AP V F +LI + +N + + +++ +G + V T NA I
Sbjct: 420 LLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARR---LFKVMEKKGKAPSVVTYNAFIE 476
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ + Y++ E+ G+ P+ +T+ +L+ G G +
Sbjct: 477 RYCKKGKMEEAYKLINEM------QERGL----------MPDTYTYTSLIDGERASGNVD 520
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ +++ EM +LG + +Y+V+++ ++ R EA KL++EM + + D Y+++I
Sbjct: 521 RALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 580
Query: 325 GGFCEIGEMARAEE 338
++G + E
Sbjct: 581 ASLHKVGPLVSGLE 594
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 149/272 (54%), Gaps = 3/272 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + ++R ++ P+V TF+AL+ F +EG + E ++ EM + +P
Sbjct: 99 YGRWSDASRLLSDMIER--KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 156
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+YS L+ FC R+ EA++++E M K+ DVV YNT+I GFC+ + E FRE
Sbjct: 157 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 216
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G+ ++VT+ L+ G +AGD D A ++ +M G P T L+ LC +
Sbjct: 217 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 276
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ +A+ + + + + + PT +Y +I+G+C+ GK+E+ + + KG +P + Y+
Sbjct: 277 LEKAMVVFE-YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 335
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
I G+ ++G+ E A L KEM E+ G
Sbjct: 336 TMISGFCRKGSKEEADALFKEMKEDGTLPNSG 367
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 122/239 (51%), Gaps = 1/239 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P V +N ++ G + + +++ EM G P+ +YS L++ C R +A
Sbjct: 46 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 105
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L +M ++ + DV ++ +I F + G++ AE+ + EM ++ S VT+ L+NG
Sbjct: 106 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 165
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C +D A ++ M K P+ T LI C +RV E +++ + + + GL
Sbjct: 166 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR-EMSQRGLVG 224
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y LI+GL + G + A ++ EMV G P++ Y+ +DG K G +E A ++
Sbjct: 225 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 283
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 120/246 (48%), Gaps = 1/246 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P++ T+ ++ G + G + ++ +M + EP Y+ ++ C+ + M +A
Sbjct: 13 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 72
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L++EM K + +VV Y+++I C G + A +M + TF L++ +
Sbjct: 73 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 132
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G + A +Y++M ++ +P T LI C R+ EA + + V K FP
Sbjct: 133 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH-CFPDV 191
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LIKG C+ ++EE ++V EM +G + Y+ I G + G+ +MA + KE
Sbjct: 192 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 251
Query: 484 MFENQV 489
M + V
Sbjct: 252 MVSDGV 257
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 128/273 (46%), Gaps = 21/273 (7%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
D ++FE +V + C ++ LIK + K ++E +++ R + RGL
Sbjct: 173 DEAKQMFEFMVS--KHCFPDVVTYNTLIKGFCKYK---RVEEGMEVFREMSQRGLVGNTV 227
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T N LI + + EI++E+ SD V PN+ T+N L+ G
Sbjct: 228 TYNILIQGLFQAGDCDMAQEIFKEMV---SDG-------------VPPNIMTYNTLLDGL 271
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G EK V+ + R EP Y+Y++++ C+ ++ + L+ + K V+ DV
Sbjct: 272 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 331
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
VAYNT+I GFC G A+ F+EM G +S + L+ R GD +++ + +
Sbjct: 332 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 391
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
M GF + STI ++ L D R LD+L
Sbjct: 392 MRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 424
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 1/212 (0%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M GC+PD +Y V++ C+ A L +M +E V+ YNTII G C+
Sbjct: 7 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
M A F+EM G+ + VT+ L++ C G A + +DM + P+ T
Sbjct: 67 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI + ++ EA + L +VK + P+ +Y LI G C +++EA ++ MV K
Sbjct: 127 LIDAFVKEGKLVEA-EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 185
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P + Y+ I G+ K VE + +EM
Sbjct: 186 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 217
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 95/188 (50%), Gaps = 5/188 (2%)
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L + M K + D+V Y ++ G C+ G+ A +M +E + + +++G C
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ +D A+ ++ +M KG P T LI LC+ R +A +L + +++ + P
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL-SDMIERKINPDV 121
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++ LI +EGK+ EA K+ EMV + +PS+ YS+ I+G+ ++ A K+
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA----KQ 177
Query: 484 MFENQVRQ 491
MFE V +
Sbjct: 178 MFEFMVSK 185
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
M KG +P+ T V++ LC + A ++L ++ + L P Y +I GLC+
Sbjct: 7 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN-KMEQGKLEPGVLIYNTIIDGLCKYK 65
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
M++AL + EM KG P++ YS+ I G A+ L +M E ++ +
Sbjct: 66 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 194/425 (45%), Gaps = 31/425 (7%)
Query: 91 FFSF--TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ + S +H+L SY T+IH L +++ A+ +I+V + +F +
Sbjct: 3 FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIF 62
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+T S +VF LI LE + C + R V TC ++ + +
Sbjct: 63 ETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTR---EHKFWVPFDTCRKVLEHLMK 119
Query: 209 GKGVISGYEIYREVFGLD----------------SDATAGIGKDVKRVVR---VRPNVHT 249
K + Y E+ D I + V + +RP+V +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVS 179
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N LM G+ R G ++ + M G +PD Y+YSVL+ C+E ++ +A +L++EM
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEML 239
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + + V + T+I G C+ G + A E +++M + +T+ L+ G C+ GD+
Sbjct: 240 VKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + ++M KG +P+ T LI C + A + K R+++ + Y L
Sbjct: 300 QAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRK-RMIQENTRLDDVVYTAL 358
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I GLC EG+ +A K+ EM+ G +P Y+ I+ + K+G+V + L KEM
Sbjct: 359 ISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM----- 413
Query: 490 RQEDG 494
Q DG
Sbjct: 414 -QRDG 417
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 78/152 (51%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ + EM+ G +PD +Y+ L+ C++ + A
Sbjct: 278 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAF 337
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N D V Y +I G C G+ AE+ REM G++ + T+ ++N +
Sbjct: 338 EHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEF 397
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ GDV + +M R G P T VL+
Sbjct: 398 CKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 90/190 (47%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + + + +D + G+
Sbjct: 262 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL------IDEMSMKGL-- 313
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G ++G AFE + + E RL D Y+ L++
Sbjct: 314 --------KPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRL----DDVVYTALISG 361
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C E + +AEK+ EM ++ D Y II FC+ G++ + + +EM G S
Sbjct: 362 LCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 422 VVTYNVLMNG 431
>gi|30697337|ref|NP_849849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215314|sp|Q3ECH5.1|PP107_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g66345, mitochondrial; Flags: Precursor
gi|332196377|gb|AEE34498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 214/484 (44%), Gaps = 39/484 (8%)
Query: 11 FSVSKPKPKPQLLS---QFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS 67
+ VS+ P+L+ FS+ ++ P+ Q LI + L +S W L + S
Sbjct: 16 YLVSQSTRSPKLIHGFFSFSSKTNPNPNKQQQILIDYISKSL---QSNDTWETLSTKFSS 72
Query: 68 -GLTPTQFSQIALGLKN--NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPA 124
L+ + I L KN AL FF ++ H +H + SYA IHIL +ARL+ A
Sbjct: 73 IDLSDSLIETILLRFKNPETAKQALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDA 132
Query: 125 RDVIRVAL-RSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDI 183
R +I +L SP P L + L+ TY S P VFDLL++C I +E D+
Sbjct: 133 RALIESSLLNSP---PDSDLVDSLLDTYEISSSTPLVFDLLVQC---YAKIRYLELGFDV 186
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRV 243
+ L G ++ V T N LI S+ K + IY I K R+
Sbjct: 187 FKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYE----------CAIDK------RI 230
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
PN T ++ +EG ++V D+ + C P + L+ EE R+ E+
Sbjct: 231 YPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMS 290
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L + + KN+ D + Y+ ++ + G++ A + F EM G ++S + V C
Sbjct: 291 LLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCC 350
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD---KRRVFEALDILKARVVKFGLF 420
GDV A + ++M G P T LIG + + E +++ R GL
Sbjct: 351 EKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTR----GLM 406
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P+ ++ ++K + + + A ++ + + KGF P YS I G+++ +++ A L
Sbjct: 407 PSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKL 466
Query: 481 RKEM 484
EM
Sbjct: 467 FYEM 470
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 1/226 (0%)
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+EG V+ EM + G + + Y+V + V CE+ ++EAE+L EM + V
Sbjct: 316 KEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDE 375
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+N +IGGF G + E+ M G+ S F +V + +V+ A +
Sbjct: 376 TFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKS 435
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
KGF P+ T LI + + +AL + + + P + + LI GLC GK
Sbjct: 436 IDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYR-KMSPGFEVFRSLIVGLCTCGK 494
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+E K M + EP+ +IY A I + K G+ A + EM
Sbjct: 495 VEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 154/387 (39%), Gaps = 52/387 (13%)
Query: 67 SGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCK----HSLSSYATIIHILSRARL-- 120
S TP F + +L L F F K LC S+ + T+IH S++++
Sbjct: 160 SSSTPLVFDLLVQCYAKIRYLELGFDVF---KRLCDCGFTLSVITLNTLIHYSSKSKIDD 216
Query: 121 -------------IGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKC 167
I P IR+ ++ + +LK EV+ R CG +++
Sbjct: 217 LVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLK--EVVDLLDRICGKRCLP-SVIVNT 273
Query: 168 CLEVKNIE--KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGL 225
L + +E +IE + +++ L+ + + V + +++ ++ ++S +++ E+
Sbjct: 274 SLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQR 333
Query: 226 DSDATAGI----------GKDVKRVVR---------VRPNVHTFNALMVGFYREGAFEKV 266
A + + DVK R V P TFN L+ GF R G EK
Sbjct: 334 GFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKG 393
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ M G P C +++ ++ + + A ++ + DK D Y+ +I G
Sbjct: 394 LEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRG 453
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
F E ++ +A + F EM + F L+ G C G V++ M ++ EP
Sbjct: 454 FIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPN 513
Query: 387 GSTIEVL------IGELCDKRRVFEAL 407
+ L IG+ + RV+ +
Sbjct: 514 ADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ +T ++ C+ G + + + + +C K P L+ + ++ R+ E++ +L
Sbjct: 233 NEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLL 292
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
K ++K + T Y ++ +EG + A KV EM+ +GF + +Y+ F+ +
Sbjct: 293 KRLLMKNMVVDT-IGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCE 351
Query: 471 EGNVEMATMLRKEMFENQVRQED 493
+G+V+ A L EM E+ V D
Sbjct: 352 KGDVKEAERLLSEMEESGVSPYD 374
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 162/300 (54%), Gaps = 17/300 (5%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
+G+ + T N L+ R +G++S E FGL D AG G ++P + T
Sbjct: 253 KGVYADLVTYNTLVNAYCR-RGLVS------EAFGL-VDCMAGKG--------LKPGLFT 296
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+NAL+ G +EG++E+ + V EM +G P+ +++ ++ C + + EAE+++ EM
Sbjct: 297 YNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEML 356
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ V D++++++I+G F GE+ RA +F +M G+ +V + L+NGYCR DV
Sbjct: 357 QRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVS 416
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A+ + N+M +G + T L+ LC + + +A ++ K +V+ G+FP + L
Sbjct: 417 GALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFK-EMVERGVFPDFYTLTTL 475
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I G C++G M +AL + M + +P + Y+ +DG+ K G +E A L +M ++
Sbjct: 476 IHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREI 535
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 144/289 (49%), Gaps = 20/289 (6%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV------------------FGLDSD 228
++ RG + V T N L+ + RGK + E+++E+ + D +
Sbjct: 425 MVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGN 484
Query: 229 ATAGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
T + +R ++P+V T+N LM GF + G EK +++W +M P S+S+
Sbjct: 485 MTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSI 544
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ FC + EA +LW+EM++K ++ +V NTII G+ G +++A +F M G
Sbjct: 545 LINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEG 604
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
V +T+ L+N + + + D A + N+M +G P T ++G R+ EA
Sbjct: 605 VPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAE 664
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+L + K G+ P + +Y LI G + M+EA +V EM+ +GF P
Sbjct: 665 MVLHKMIDK-GINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVP 712
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 116/246 (47%), Gaps = 1/246 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V + P+ + L+ G+ R + EM GC D +Y+ L+ C + + +
Sbjct: 393 VGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDD 452
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A++L++EM ++ V D T+I G+C+ G M +A F M L ++ VT+ L++
Sbjct: 453 ADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMD 512
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G+C+ G+++ A ++ DM + P + +LI C V EA + K G+
Sbjct: 513 GFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEK-GIK 571
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
PT + +IKG G + +A M+ +G P Y+ I+ ++KE N + A L
Sbjct: 572 PTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFL 631
Query: 481 RKEMFE 486
M E
Sbjct: 632 INNMEE 637
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 115/241 (47%), Gaps = 1/241 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+++ NAL+ + G + V+ + + G + Y+ ++++ C++ ++
Sbjct: 188 SINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYL 247
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM +K V D+V YNT++ +C G ++ A M G++ T+ L+NG C+
Sbjct: 248 SEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKE 307
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + A V ++M G P +T ++ E C K V+EA + +++ G+ P S
Sbjct: 308 GSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFN-EMLQRGVVPDLIS 366
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+ ++ G++ AL +M G G P IY+ I+GY + +V A +R EM
Sbjct: 367 FSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMV 426
Query: 486 E 486
E
Sbjct: 427 E 427
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P + T N ++ G+ R G K D M G PDC +Y+ L+ F +E A
Sbjct: 570 IKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAF 629
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L M ++ + ++V YN I+GGF G M AE +M G+ T+ L+NGY
Sbjct: 630 FLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGY 689
Query: 363 CRAGDVDSAILVYNDMCRKGFEPE 386
++ A V+++M ++GF P+
Sbjct: 690 VSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 1/205 (0%)
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
+ +L+ + + R++RE + ++ +R + + A N ++G ++G + A + + +
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFV 216
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
SG + T +VN C+ G +D+ + ++M KG + T L+ C + V
Sbjct: 217 KSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVS 276
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
EA ++ K GL P +Y LI GLC+EG E A +V EM+G G P+ ++
Sbjct: 277 EAFGLVDCMAGK-GLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPM 335
Query: 465 IDGYMKEGNVEMATMLRKEMFENQV 489
+ ++ +V A + EM + V
Sbjct: 336 LVESCRKEDVWEAERVFNEMLQRGV 360
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
VV ++ +I + + ++ E F+ + G S L+ + G VD A VY
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
D + G T+ +++ LC ++ + + + + + + G++ +Y L+ C
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKL-DNVGVYLSEMEEKGVYADLVTYNTLVNAYCRR 272
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
G + EA + M GKG +P L Y+A I+G KEG+ E A + EM
Sbjct: 273 GLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEML 321
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 200/434 (46%), Gaps = 40/434 (9%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI 128
L P ++ L NNPH+ RF+ F++ K +HS +Y + L +A + A +
Sbjct: 67 LNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGMHDLAGQMF 126
Query: 129 RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK------CCLEVKNIEKIETCVD 182
++S P +L LV ++ E G LL++ CC+ V ++ + T V
Sbjct: 127 E-CMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQSYEVEGCCMVVNSL--LNTLVK 183
Query: 183 IVRMLMSRGL---SVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
+ R+ + L ++ +CN + F + G+GK K
Sbjct: 184 LDRVEDAMKLFEEHLRFQSCND------------------TKTFNILIRGLCGVGKAEKA 225
Query: 240 V--------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM-ARLGCEPDCYSYSVLMA 290
V P++ T+N L+ GF + +K +++ ++ + GC PD +Y+ +++
Sbjct: 226 VELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMIS 285
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+C+ +M+EA L ++M + V +N ++ G+ + GEM AEE +M G
Sbjct: 286 GYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFP 345
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
VTF L++GYCR G V+ ++ +M +G P T +LI LC + R+ +A ++L
Sbjct: 346 DVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELL 405
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
++ + P Y +I G C+ GK+ EA+ + EM K +P ++ I G+
Sbjct: 406 -GQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 471 EGNVEMATMLRKEM 484
+G + A + +M
Sbjct: 465 KGRMFEAVSIFHKM 478
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 193/415 (46%), Gaps = 29/415 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + D +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKDSASAVFAAILETRGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-------- 210
+VF LI LE + C R+ V TC ++ + + K
Sbjct: 67 YVFSGLITAYLESGFLRDAIECX---RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 211 ---GVISGYEIYREVFGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYR 259
+ GY F + + G+ D +RP+V +FN LM G+ +
Sbjct: 124 YEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G + + M G +PD Y+YSVL+ C+E +M +A +L++EM D + + V
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ T+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P+ T LI C + + A + K ++K + + +Y LI GLC+EG+
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFEYRKI-MIKENIRLDDVAYTALISGLCQEGRS 362
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A K+ EM+ G + + Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 363 VDAEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEM------QRDG 411
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ +D + G+
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FC+ G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 184/393 (46%), Gaps = 20/393 (5%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+H+L SY T+IH+L +++ A+ +I+V + D +FE +++T S +VF
Sbjct: 10 RHTLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQISDFYVF 69
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
L+ LE + C R+ + V TC ++ + + ++ Y+E
Sbjct: 70 SGLMIAYLESGFVRDAVQCF---RLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKE 126
Query: 222 VFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
V A+ ++ FN LM F +EG + V+ + + G P
Sbjct: 127 VLECGYPAS----------------LYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPS 170
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
S++ L+ + + + E +L M + DV Y+ +I G C+ G++ A E F
Sbjct: 171 VVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFN 230
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM +G+ + VTF L++G+C+ VD A+ +Y M +G P+ T LI LC K
Sbjct: 231 EMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKG 290
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ + D++ ++ GL P + SY LI G C+EG +E AL+++ +M+ + Y
Sbjct: 291 ELKQVHDLIDEMIMN-GLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAY 349
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A I +EG A + +EM ++ ++G
Sbjct: 350 TALISCLCREGRAGDAEKMLREMLSVGLKPDNG 382
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
EK++ ++I + ++S+GLS + T N LI+ + + + +++ E+
Sbjct: 255 EKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMI----------- 303
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+ ++P+ ++ L+ G +EG E ++ +M + D +Y+ L++ C
Sbjct: 304 -----MNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCR 358
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E R +AEK+ EM ++ D Y II FC+ + A + REM G VT
Sbjct: 359 EGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVPGVVT 418
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 196/444 (44%), Gaps = 55/444 (12%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY-RECGSAPFV 160
+H+ SY + + LS ++ + +IR + D +F ++ T C + FV
Sbjct: 98 RHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSN--FV 155
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRM--------------------------------LM 188
FD L+ + + C +VR ++
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEIL 215
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV----------------FGLDSDATAG 232
G KV N LI + + + I+ E+ GL
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275
Query: 233 IGKDVKRVV---RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
G +K+ + R+ P+V T++ L+ G +EG + E ++ EM + G P+ +++ L+
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335
Query: 290 AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
C RR+ A + +M V+ D+V YNT++ G C++G++ +A + EM + G++
Sbjct: 336 DGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMK 395
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
+T+ L++GYC+ GD++SA+ + M +G + LI C RV +A
Sbjct: 396 PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERT 455
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
L+ +V+ G+ P + +Y +I G C++G ++ K+ EM G +P + Y+ ++G
Sbjct: 456 LR-EMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLC 514
Query: 470 KEGNVEMATMLRKEMFENQVRQED 493
K+G ++ A ML + M V +D
Sbjct: 515 KQGQMKNANMLLEAMLNLGVTPDD 538
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 4/195 (2%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D R+V ++P+ T+ L+ G+ +EG E ++ M G D +++ L++ FC +
Sbjct: 387 DEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRD 446
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+R+AE+ EM + ++ D Y +I G+C+ G + + +EM ++G + +T+
Sbjct: 447 GRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITY 506
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+NG C+ G + +A ++ M G P+ T +L+ C + A D+LK R
Sbjct: 507 NVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGK---AEDLLKLRNE 563
Query: 416 KFGLFPTEKSYMFLI 430
K GL Y L+
Sbjct: 564 K-GLIVDYAYYTSLV 577
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 202/430 (46%), Gaps = 48/430 (11%)
Query: 82 KNNPHLALRFFSFT-QHKSLCKHSLSSYATIIHILSRARLIGPAR----DVIRVALRSPE 136
+ N LAL+ F + +++ H+ +Y +IIH LSRAR+ GP D+ + ++ E
Sbjct: 71 QQNLDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCGE 130
Query: 137 NDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEK----IETCV---------DI 183
N +F +++ Y G F I+ ++ N+++ + T + D+
Sbjct: 131 N-----IFINVIRNYGLAGKPDFALRTFIR--IQDFNVQRSVRSLNTLLNAFVQNKRYDL 183
Query: 184 VRMLMSR-----GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK 238
V + G+ V TCN LI + + V S ++ E+ +
Sbjct: 184 VHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMG------------ 231
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
+ PNV T+ ++ G+ G V+ E+ G PD +Y++LM +CE+ R+
Sbjct: 232 ----MIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRL 287
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+A KL ++M + VE + V Y ++ +C+ + A +M SS +
Sbjct: 288 ADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKV 347
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++ C AG ++ A ++ M +K P+ + + LI LC + +V+EA + + G
Sbjct: 348 IDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGE--FERG 405
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
P+ +Y LI G+CE+G++ EA K+ +M+ KG++P+ Y+ I G+ K GN +
Sbjct: 406 AIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGI 465
Query: 479 MLRKEMFENQ 488
+ +EM +N+
Sbjct: 466 RILEEMLDNR 475
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + L+ +EG + ++ E R G P +Y+ L+A CE+ + EA KL
Sbjct: 374 PDNAIMSTLIHWLCKEGKVWEARKLFGEFER-GAIPSLLTYNTLIAGMCEKGELSEAGKL 432
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W++M +K + + YN +I GF +IG EM + + T+ L+ C+
Sbjct: 433 WDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCK 492
Query: 365 AG 366
G
Sbjct: 493 MG 494
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 195/412 (47%), Gaps = 46/412 (11%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C + S+ T+IH + + A ++I N+ K E V TY +
Sbjct: 260 CSPDVVSFNTVIHGFFKQGEVSKACNLI--------NEMVQKGVEPDVVTYNS------I 305
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI--------WEVS----- 207
D L K + ++K E ++R ++ +G+ T A+I W+ S
Sbjct: 306 VDALCK----ARAMDKAEL---VLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFR 358
Query: 208 --RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVR------PNVHTFNALMVGFYR 259
KG+I G + + S G KD + + + P++ +++ L+ G+
Sbjct: 359 KMTSKGLIPGIVTFNSF--MSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYAT 416
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
EG F + +++ MA G +C+ +++L++ + M EA ++ EM+ + V DVV
Sbjct: 417 EGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVT 476
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
Y+T+I FC +G +A A E F +M G+E ++V + L++G+C GD+ A + ++M
Sbjct: 477 YSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMM 536
Query: 380 RKGF-EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
KG P +I LC++ RV +A D+ V+ G PT ++ LI G C GK
Sbjct: 537 SKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNL-VIHIGDRPTIVTFNSLIDGYCLVGK 595
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
ME+A V MV G EP + Y+ + GY K G ++ +L +EM +V+
Sbjct: 596 MEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVK 647
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 127/553 (22%), Positives = 224/553 (40%), Gaps = 113/553 (20%)
Query: 7 KHIIFSVSKPKPKPQLLSQFSTSSSTPPS---DQSHNLIATVVSLLTHHRSKSRWNHLLS 63
+ + S S P P+ QLL + S+SS++P S D +A + + S +HL
Sbjct: 39 RRLFSSSSTPMPRLQLLPRRSSSSTSPTSRCWDPQVAFVAAIARVRAGTFSTDDAHHLFD 98
Query: 64 -LCRSGLTPTQFSQI------------ALGLKNNPHLALRFFSFTQHKSLCKH------- 103
L R G TP + ++ N P L L F+ +C+
Sbjct: 99 ELLRQG-TPVHNPALNGFLAALARAPDSVSCSNGPALVLALFN-----RICREEAGPRVA 152
Query: 104 --SLSSYATIIHILSRARL--IGPA--RDVIRVALRSPENDPKLKLFEVLVKTYRECGSA 157
S+ +Y ++ RAR +GPA ++R LR+ + E
Sbjct: 153 PLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRT-------RTIEA----------- 194
Query: 158 PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
+ +KC K + + VD++ MS ++ IS
Sbjct: 195 ----NTFLKCLCHAK---RTDEAVDVLLHRMS---------------DLGCVPNAISYNT 232
Query: 218 IYREVFGLDS---DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
+ + + G DS +A + + K R P+V +FN ++ GF+++G K ++ EM
Sbjct: 233 VIKSLCG-DSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMV 291
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
+ G EPD +Y+ ++ C+ R M +AE + +M DK VE D + Y II G+ G
Sbjct: 292 QKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWK 351
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
+ + FR+M G+ VTF ++ C+ G A ++ M KG P+ + +L+
Sbjct: 352 ESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILL 411
Query: 395 ------GELCDKRRVFEAL------------DILKARVVKFGLF---------------- 420
G D +F ++ +IL + K G+
Sbjct: 412 HGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVR 471
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y LI C G++ +A++ ++M+ G EP+ +Y + I G+ G++ A L
Sbjct: 472 PDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKEL 531
Query: 481 RKEMFENQVRQED 493
EM + + +
Sbjct: 532 VSEMMSKGIPRPN 544
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 116/231 (50%), Gaps = 1/231 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RP + TFN+L+ G+ G EK V M +G EPD +Y+ L++ +C+ ++ +
Sbjct: 577 RPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLI 636
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+ EM K V+ V Y+ ++ G G + A++ F EM SG T++ L+ G C
Sbjct: 637 LFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLC 696
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R D AI +++ + + + + + +I L RR EA D+ A + GL P
Sbjct: 697 RNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAA-ISTSGLVPNV 755
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+Y +I L +EG +EEA + + M G PS + + I +++G++
Sbjct: 756 STYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDI 806
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 118/244 (48%), Gaps = 7/244 (2%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPN+ F++++ EG DV+ + +G P +++ L+ +C +M +A
Sbjct: 542 RPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFG 601
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ + M +E DVV YNT++ G+C+ G++ FREM V+ ++VT+ +++G
Sbjct: 602 VLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLF 661
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVKFGLF 420
AG +A ++++M G + T ++L+ LC EA+ + L A KF +
Sbjct: 662 HAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDIT 721
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+I L + + EEA + A + G P++ Y I +KEG+VE A +
Sbjct: 722 ILNT----VINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTM 777
Query: 481 RKEM 484
M
Sbjct: 778 FSSM 781
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 128/315 (40%), Gaps = 43/315 (13%)
Query: 98 KSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSA 157
K + + ++ +++IIH L + A DV + + + P + F L+ Y
Sbjct: 538 KGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDR-PTIVTFNSLIDGY------ 590
Query: 158 PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
CL + K+E ++ ++S G+ V T N L+ + + G
Sbjct: 591 ----------CL----VGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLI 636
Query: 218 IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
++RE+ +V+P T++ ++ G + G + ++ EM G
Sbjct: 637 LFREMLH----------------KKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSG 680
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
D +Y +L+ C EA L+ ++ + + D+ NT+I ++ A
Sbjct: 681 TAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEAN 740
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+ F + SG+ + T+ +++ + G V+ A +++ M + G P + +I
Sbjct: 741 DLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII--- 797
Query: 398 CDKRRVFEALDILKA 412
R + + DI+KA
Sbjct: 798 ---RMLLQKGDIVKA 809
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 174/350 (49%), Gaps = 23/350 (6%)
Query: 142 KLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC 199
K F++LV+ RE G +P ++ LI C + IEK + D+ + GL T
Sbjct: 181 KSFDLLVEL-REFGFSPNVVIYTTLIDGCCKKGEIEKAK---DLFFEMGKFGLVANEWTY 236
Query: 200 NALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYR 259
LI + + G+E+Y ++ + V PN+HT+N +M +
Sbjct: 237 TVLIHGLFKNGIKKQGFEMYEKM----------------QEHGVFPNLHTYNCVMNQLCK 280
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
+G + V+ EM G + +Y+ L+ C E + EA ++ ++M+ + +++
Sbjct: 281 DGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLIT 340
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YNT+I GFC + ++ +A R++ G+ S VT+ LV+G+C+ GD A V +M
Sbjct: 341 YNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME 400
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+G +P T +LI + +A+ L++ + + GL P +Y LI G C +G+M
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQ-LRSSMEELGLTPDVHTYSVLIHGFCIKGRM 459
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EA ++ MV K FEP+ IY+ + GY KEG+ A L +EM E ++
Sbjct: 460 NEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKEL 509
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 123/250 (49%), Gaps = 1/250 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
++V +V++F ++ G G EK D+ VE+ G P+ Y+ L+ C++ + +
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A+ L+ EM + + Y +I G + G + E + +M GV + T+ ++N
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMN 276
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
C+ G A V+++M +G T LIG LC + + EA +++ ++ G+
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMD-QMKSDGIN 335
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y LI G C K+ +AL + ++ +G PSL Y+ + G+ K+G+ A +
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395
Query: 481 RKEMFENQVR 490
KEM E ++
Sbjct: 396 VKEMEERGIK 405
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 129/292 (44%), Gaps = 41/292 (14%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
++ +Y T+I L R A +V+ ++S +P L + L+ + CG
Sbjct: 302 NIVTYNTLIGGLCREMKANEANEVMD-QMKSDGINPNLITYNTLIDGF--CG-------- 350
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
+ K+ + + R L SRGLS + T N L+ SG+
Sbjct: 351 ----------VRKLGKALSLCRDLKSRGLSPSLVTYNILV----------SGF------- 383
Query: 224 GLDSDATAGIGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
T+G GK VK + ++P+ T+ L+ F R EK + M LG PD
Sbjct: 384 -CKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPD 442
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
++YSVL+ FC + RM EA +L++ M +K E + V YNT++ G+C+ G RA FR
Sbjct: 443 VHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFR 502
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
EM + + ++ +++ C+ A + M G P S + ++
Sbjct: 503 EMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI 554
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ GF ++G V EM G +P +Y++L+ F M +A
Sbjct: 369 LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L M + + DV Y+ +I GFC G M A F+ M E + V + +V GY
Sbjct: 429 QLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGY 488
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G A+ ++ +M K P ++ +I LC +R+ EA +++ +++ G+ P+
Sbjct: 489 CKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVE-KMIDSGIGPS 547
Query: 423 E 423
+
Sbjct: 548 D 548
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
++ S +E ++N Y ++ +DS+I +N+M KGF P + L+ + +
Sbjct: 91 KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWC 150
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+K L S+ +IKG CE G++E++ + E+ GF P++ IY+ IDG
Sbjct: 151 FFNESKIKVVL--DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGC 208
Query: 469 MKEGNVEMATMLRKEM 484
K+G +E A L EM
Sbjct: 209 CKKGEIEKAKDLFFEM 224
>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1385
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 190/425 (44%), Gaps = 59/425 (13%)
Query: 87 LALRFFSFTQHKSLCK--HSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF 144
LAL+F ++ K + H +T HIL +AR+ G A+ + L + F
Sbjct: 38 LALKFLNWVIKKPNLEINHLTHIISTTTHILVKARMYGYAKTTLSHMLHMDVGFNNV--F 95
Query: 145 EVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
L++TY C S P VFDLLI+ CL +N+ + V+ R++ RG S V TCN ++
Sbjct: 96 GALMETYPFCNSNPAVFDLLIRVCLR-ENM--VGDAVEAFRLMGFRGFSPSVFTCNMVLG 152
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ + + V + ++E+ RV PNV TFN L+ G F+
Sbjct: 153 SLVKDREVDLFWSFFKEMIA----------------NRVSPNVATFNILLNALCERGKFK 196
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV------- 317
+ +M G P +Y+ L+ +C++ R + A +L + M K + DV
Sbjct: 197 SAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLI 256
Query: 318 ----------------------------VAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
+ YNT+I G + G++ A + F EM L +
Sbjct: 257 DDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLL 316
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
+SVT+ L+ G+C G+++ A+ + + M G P T L+ + K F +
Sbjct: 317 PNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGI-SKHAQFGLVSS 375
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
+ R+ G+ SY +I GLC+ G +EEA+++ +M+ P + +S ++G++
Sbjct: 376 VLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFL 435
Query: 470 KEGNV 474
K G V
Sbjct: 436 KTGLV 440
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 126/242 (52%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN + +L+ G +EG + ++ +M G +PD +++VL+ + + +M +
Sbjct: 650 LSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVN 709
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ MR +++ ++ YN ++ G+ + MAR + + EM + G +T+ L+ GY
Sbjct: 710 DILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGY 769
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++G +D A+ + +GF+ + T+ VL+ +LC++ + A D++K ++ G+ P
Sbjct: 770 CKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVK-QLNMLGVTPN 828
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L G +EA + ++ G+ P+ + ++ I G + GNV+ A L+
Sbjct: 829 VDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQD 888
Query: 483 EM 484
EM
Sbjct: 889 EM 890
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 1/248 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N F+ L+ RE + + M G P ++ ++++ ++R + +
Sbjct: 108 NPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFF 167
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM V +V +N ++ CE G+ A R+M +G ++VT+ L+N YC+
Sbjct: 168 KEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKK 227
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G +A + + M KG + T VLI +LC K R + IL+ R+ K ++P E +
Sbjct: 228 GRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILR-RMRKNMVYPNEIT 286
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI GL +EGK+ A KV EM P+ Y+ I G+ GN+E A L M
Sbjct: 287 YNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMV 346
Query: 486 ENQVRQED 493
+ +R +
Sbjct: 347 SHGLRPNE 354
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 145/314 (46%), Gaps = 17/314 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K+ DI+ + SR L ++T N L+ S+ G+ ++Y E+
Sbjct: 704 KMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMI------------ 751
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ P+ T+++L++G+ + G+ + ++ G + DC++ +VL++ CE
Sbjct: 752 ----IHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCER 807
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
++ A L +++ V +V YN++ GF A + +G + F
Sbjct: 808 NEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQF 867
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+ G CR G+V A+ + ++M G +G + +I L R+ EA IL ++
Sbjct: 868 TTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRIL-GIML 926
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ + PT ++ L+ C+EG + +AL++++ M + + Y+ I G +G+++
Sbjct: 927 EMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQ 986
Query: 476 MATMLRKEMFENQV 489
A L +EM + +
Sbjct: 987 AAFKLYEEMEQRDI 1000
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 120/296 (40%), Gaps = 33/296 (11%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
+++ + S+G++ V T N LI ++ R GY I R + R
Sbjct: 235 ELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRM----------------RKN 278
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
V PN T+N L+ G +EG V+ EM+ P+ +Y+ L+ C + EA
Sbjct: 279 MVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEA 338
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L + M + + V Y ++ G + + M + GV +++ +++G
Sbjct: 339 LRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDG 398
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G ++ A+ + +DM + P+ T VL+ +K GL P
Sbjct: 399 LCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGF-----------------LKTGLVP 441
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ LI C+ G ++EAL A M G S + + + G +E A
Sbjct: 442 NRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEA 497
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+ FN L+ + R+G KV D+ M + +Y++L+ + + M
Sbjct: 685 VQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCS 744
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL+ EM D + ++++I G+C+ G + A +F R++ + G + T LV+
Sbjct: 745 KLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKL 804
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C ++ A + + G P T L EA IL A +++ G PT
Sbjct: 805 CERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHA-LLENGYAPT 863
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
K + LI+G+C G ++ A+++Q EM G SA I G + + AT +
Sbjct: 864 CKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILG 923
Query: 483 EMFENQV 489
M E Q+
Sbjct: 924 IMLEMQI 930
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 172/449 (38%), Gaps = 75/449 (16%)
Query: 100 LCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP- 158
LC+ S S+ +I R ++ P + + K+ + + + C P
Sbjct: 259 LCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPN 318
Query: 159 -FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
++ LI NIE+ D+ ++S GL T AL+ +S+
Sbjct: 319 SVTYNTLIFGHCSNGNIEEALRLCDV---MVSHGLRPNEVTYGALLNGISK--------- 366
Query: 218 IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
FGL S + D RV + ++ ++ G + G E+ + +M ++
Sbjct: 367 --HAQFGLVSSVLERMRMDGVRVGHI-----SYTTMIDGLCKNGLLEEAVQLLDDMLKVS 419
Query: 278 CEPDCYSYSVLMAVF-------------------CEERRMREAEKLWEEMRDKNVEHDVV 318
PD ++SVL+ F C+ ++EA + M D
Sbjct: 420 VSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHF 479
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+ ++ FC G + AE F M G+ SSVTF+ +++ Y +GD A V++ M
Sbjct: 480 TSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKM 539
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEA---------------------LDILKAR---- 413
G P T E L+ L + EA + L +R
Sbjct: 540 NSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNL 599
Query: 414 ---------VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF-EPSLEIYSA 463
+V P +Y LI GLC +GKM AL + + KG P+ +Y++
Sbjct: 600 SNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTS 659
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+DG +KEG+ + A + ++M V+ +
Sbjct: 660 LVDGLLKEGHSKAALYMFEDMLNEGVQPD 688
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 119/287 (41%), Gaps = 56/287 (19%)
Query: 241 VRVRPNVHTFNALMVGFYREG-------------------AFEKVEDVWVEMARLGCEPD 281
V V P++ TF+ L+ GF + G ++ + + M + G D
Sbjct: 418 VSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSD 477
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
++ SVL+A FC R+ EAE + M + V ++ II + G+ +A F
Sbjct: 478 HFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFD 537
Query: 342 EMGLSGVESSSVTFEH-----------------------------------LVNGYCRAG 366
+M G S T+E ++ R+G
Sbjct: 538 KMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSG 597
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF-PTEKS 425
++ +A+ + ++M F P+ T LI LC K ++ AL +L R ++ GL P
Sbjct: 598 NLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPAL-LLSGRAIEKGLLSPNPAM 656
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
Y L+ GL +EG + AL + +M+ +G +P ++ +D Y ++G
Sbjct: 657 YTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKG 703
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 107/271 (39%), Gaps = 52/271 (19%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
++ V +R + G V T N L+ ++ + +++ +++
Sbjct: 775 LDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQL-------------- 820
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
++ V PNV T+N+L GF R +F++ + + G P C ++ L+ C
Sbjct: 821 --NMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMG 878
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGG------------------------------ 326
++ A +L +EM+ V VA + II G
Sbjct: 879 NVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFT 938
Query: 327 -----FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
+C+ G +A+A E M V+ + L++G C GD+ +A +Y +M ++
Sbjct: 939 TLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQR 998
Query: 382 GFEPEGSTIEVLIGE-LCDKRRVFEALDILK 411
P S VLI LC + E+ +L+
Sbjct: 999 DIWPNTSIYIVLIDSFLCTGNYIVESEKLLR 1029
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 118/262 (45%), Gaps = 26/262 (9%)
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+D +++ V +A++ G R ++ + M + P +++ LM +C+
Sbjct: 887 QDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCK 946
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E + +A +L M +V+ DV AYN +I G C G++ A + + EM + ++
Sbjct: 947 EGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSI 1006
Query: 355 FEHLVNGYCRAGD--VDSAILVYNDMCRK--GFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ L++ + G+ V+S L+ + R+ + G IE+L E L I
Sbjct: 1007 YIVLIDSFLCTGNYIVESEKLLRDLRTRELMSLDLHGG-IEIL----------NELLMIA 1055
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ ++ L E+S C + K+ ++ K + VG+ +E SA DG +
Sbjct: 1056 RKELIHTRLTSHEQSP-------CSQNKVVDSAKRRLS-VGEITANVIEETSAATDGRIN 1107
Query: 471 EGNVEMATMLRKEMFENQVRQE 492
E E + ML+ ++ EN +QE
Sbjct: 1108 E---EASRMLKLKLEENLWKQE 1126
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 216/471 (45%), Gaps = 34/471 (7%)
Query: 30 SSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHL-- 87
SS P+ +L + + ++L + + R N + LTPT S L NNP+L
Sbjct: 30 SSLSPNSLQQDLPSQIFTILL--QPQWRKNPSFNTLIPSLTPTHLS----SLFNNPNLHP 83
Query: 88 --ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFE 145
AL FF + ++ H++ SY ++ IL R + A +V ++S + + + F
Sbjct: 84 LTALNFFKWIHYQHGFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEAR-FV 142
Query: 146 VLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWE 205
+ + T+ E + ++ L I+++ + + +++ G+ + + N ++
Sbjct: 143 LNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNC---LFKDMLNDGVEPNLISFNTMVNA 199
Query: 206 VSRGKGVISGYEIYREV--FGLDSDATA------GIGK-----DVKRVVRVRP------N 246
+ V+ + + FG D+ G K D +V + P N
Sbjct: 200 HCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRN 259
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
++ L+ GF G ++ +++ +M GC PD +Y+VL+A FCE + EA K +E
Sbjct: 260 EVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFE 319
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
EM + +E +V Y +I FC++G+M E M G+ SS V F L++GYC+ G
Sbjct: 320 EMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRG 379
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++ AI V + M P T LI C K+ + A+ +L ++ + L P +Y
Sbjct: 380 MMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLN-KMYENKLSPNLVTY 438
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
LI GLC+ ++ A ++ M+ GF P + AFID K G VE A
Sbjct: 439 NTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQA 489
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 161/347 (46%), Gaps = 26/347 (7%)
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
LK FE +V E G P V+ + K + K++ ++++ ++ +GL V N
Sbjct: 315 LKFFEEMV----ENGIEPNVYTYTVLIDYFCK-VGKMDEGMEMLSTMLEKGLVSSVVPFN 369
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
ALI GY R G+ DA + D ++ +V PN T+N L+ GF R+
Sbjct: 370 ALI----------DGY-CKR---GMMEDAICVL--DSMKLNKVCPNSRTYNELICGFCRK 413
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
+ ++ + +M P+ +Y+ L+ C+ R + A +L M D +
Sbjct: 414 KSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTF 473
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
I C++G++ +A + F + E++ + L++GYC+A A L++ M
Sbjct: 474 CAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLF 533
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
+G P T VL+ L + +V +A+ ++ + KF PT +Y LI+ + E +
Sbjct: 534 EGCFPNSITFNVLLDGLRKEGKVEDAMSLVDV-MGKFDAKPTVHTYTILIEEILRESDFD 592
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV----EMATMLRKE 483
A +M+ G +P++ Y+AFI Y ++G + EM +++E
Sbjct: 593 RANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEE 639
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 130/309 (42%), Gaps = 69/309 (22%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ L+ F G + + EM G EP+ Y+Y+VL+ FC+ +M E ++
Sbjct: 293 PDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEM 352
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIG--------------------------------- 331
M +K + VV +N +I G+C+ G
Sbjct: 353 LSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCR 412
Query: 332 --EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
M RA +M + + + VT+ L++G C+A VDSA +++ M + GF P+ T
Sbjct: 413 KKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRT 472
Query: 390 IEVLIGELC------DKRRVFEAL----------------------------DILKARVV 415
I LC +VFE+L +L R++
Sbjct: 473 FCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRML 532
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G FP ++ L+ GL +EGK+E+A+ + M +P++ Y+ I+ ++E + +
Sbjct: 533 FEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFD 592
Query: 476 MATMLRKEM 484
A M +M
Sbjct: 593 RANMFLDQM 601
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 110/267 (41%), Gaps = 25/267 (9%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TFN L+ G +EG E + M + +P ++Y++L+ E A
Sbjct: 538 PNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMF 597
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M + +VV Y I +C G + AEE ++ G+ S ++ LVN Y
Sbjct: 598 LDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGC 657
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL--------------------CDKRRV- 403
G +DSA V M G EP T +L+ L D +
Sbjct: 658 IGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIW 717
Query: 404 ----FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
FE + +L ++V+ G P +Y LIKGLC+ + A ++ M G PS
Sbjct: 718 KIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSEN 777
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFE 486
I+++ + K G E A L M E
Sbjct: 778 IHNSLLSSCCKLGMHEEALRLLDSMME 804
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 27/268 (10%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
DV +P VHT+ L+ RE F++ +M GC+P+ +Y+ + +C +
Sbjct: 564 DVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQ 623
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS---- 351
R+ EAE++ +++++ + D Y+ ++ + IG++ A M +G E S
Sbjct: 624 GRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTY 683
Query: 352 SVTFEHLV-NGYCRAG----------DVDSA-----------ILVYNDMCRKGFEPEGST 389
S+ +HL+ Y + G VD+A +++ M +G P +T
Sbjct: 684 SILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNT 743
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
LI LC + A + + + G+ P+E + L+ C+ G EEAL++ M
Sbjct: 744 YSKLIKGLCKVEHLSLAFRLFN-HMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSM 802
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ LE Y + G ++GN E A
Sbjct: 803 MEYNHLAHLESYKLLVCGLFEQGNQEKA 830
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 10/224 (4%)
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G + V + M GCEP +YS+L+ E+ +E L ++ N+ D
Sbjct: 659 GQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGL--DLNSTNISVDN--- 713
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
+I + F +M G + T+ L+ G C+ + A ++N M
Sbjct: 714 ----ANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKE 769
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
G P + L+ C EAL +L + ++++ +SY L+ GL E+G E
Sbjct: 770 SGISPSENIHNSLLSSCCKLGMHEEALRLLDS-MMEYNHLAHLESYKLLVCGLFEQGNQE 828
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+A ++ ++ G+ ++ +DG +++G V+ + LR M
Sbjct: 829 KAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIM 872
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV+T++ L+ G + ++ M G P ++ L++ C+ EA +L
Sbjct: 739 PNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRL 798
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + N + +Y ++ G E G +AEE FR + G V ++ L++G R
Sbjct: 799 LDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVR 858
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
G VD + + M + G T +L EL
Sbjct: 859 KGYVDECSQLRDIMEKTGCRLHSDTHTMLSQEL 891
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 186/402 (46%), Gaps = 23/402 (5%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+H+L SY T+IH L +++ A+ +I V + +F +++T S +VF
Sbjct: 12 RHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQRSDIYVF 71
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
LI LE + C R+ L V TC ++ + + K + Y E
Sbjct: 72 SGLITAYLESGFLRDAIECY---RLTXEHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEE 128
Query: 222 VFGLD----------------SDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGA 262
+ D + + V + +RP+V ++N LM G+ R G
Sbjct: 129 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 188
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
++ + M G PD Y+YSVL+ C+E +M A +L++EM K + + V + T
Sbjct: 189 LDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTT 248
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M KG
Sbjct: 249 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKG 308
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+P+ T LI C + + A + R+++ + + +Y LI GLC+EG+ +A
Sbjct: 309 LKPDKFTYTTLIDGCCKEGDLDTAF-XHRKRMIQENIRLDDVAYTALISGLCQEGRSVDA 367
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
K+ EM+ G P Y+ I+ + K+G+V + L KEM
Sbjct: 368 EKMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 44/250 (17%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY-SYSVLMAVFCEERRMREAE 302
R +++ F+ L+ + G +E RL E + + V +++ +
Sbjct: 65 RSDIYVFSGLITAYLESGFLRDA----IECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFK 120
Query: 303 KLW---EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+W EE+ + + +N ++ FC+ G++ A+ F + G+ S V++ L+
Sbjct: 121 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 180
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
NGY R GD+D +GF LK+ ++ G
Sbjct: 181 NGYIRLGDLD-----------EGFR-------------------------LKSAMLASGX 204
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI GLC+E KM+ A ++ EM+ KG P+ ++ IDG+ K G V++A
Sbjct: 205 XPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAME 264
Query: 480 LRKEMFENQV 489
+ K+M +
Sbjct: 265 IYKQMLSQSL 274
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 173/350 (49%), Gaps = 23/350 (6%)
Query: 142 KLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC 199
K F++LV+ RE G +P ++ LI C + IEK + D+ + GL T
Sbjct: 181 KSFDLLVEL-REFGFSPNVVIYTTLIDGCCKKGEIEKAK---DLFFEMGKFGLVANEWTY 236
Query: 200 NALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYR 259
LI + + G+E+Y ++ + V PN++T+N +M +
Sbjct: 237 TVLIHGLFKNGIKKQGFEMYEKM----------------QEHGVFPNLYTYNCVMNQLCK 280
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
+G + V+ EM G + +Y+ L+ C E + EA K+ ++M+ + +++
Sbjct: 281 DGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLIT 340
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YNT+I GFC +G++ +A R++ G+ S VT+ LV+G+CR GD A + +M
Sbjct: 341 YNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEME 400
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+G +P T +LI + A+ L++ + + GL P +Y LI G C +G+M
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMETAIQ-LRSSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EA ++ MV K EP+ IY+ I GY KEG+ A L ++M E ++
Sbjct: 460 NEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKEL 509
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 7/253 (2%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
++V +V++F ++ G G EK D+ VE+ G P+ Y+ L+ C++ + +
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A+ L+ EM + + Y +I G + G + E + +M GV + T+ ++N
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMN 276
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA---LDILKARVVKF 417
C+ G A V+++M +G T LIG LC + + EA +D +K+ V+
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN- 335
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P +Y LI G C GK+ +AL + ++ +G PSL Y+ + G+ ++G+ A
Sbjct: 336 ---PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGA 392
Query: 478 TMLRKEMFENQVR 490
+ KEM E ++
Sbjct: 393 AKMVKEMEERGIK 405
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 20/253 (7%)
Query: 190 RGLSVKVSTCNALIW---------EVSRGKGVISGYEIYREVFGLDS--DATAGIGKDVK 238
RG+S + T N LI E ++ + Y I + ++ D +GK K
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGK 356
Query: 239 RVVRVR--------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
+ R P++ T+N L+ GF R+G + EM G +P +Y++L+
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
F M A +L M + + DV Y+ +I GFC G+M A F+ M +E
Sbjct: 417 TFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEP 476
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ V + ++ GYC+ G A+ ++ DM K P ++ LI LC +R++ EA D++
Sbjct: 477 NEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLV 536
Query: 411 KARVVKFGLFPTE 423
+ +++ G+ P++
Sbjct: 537 E-KMIDSGIDPSD 548
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 41/292 (14%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
++ +Y T+I L R A V+ ++S +P L + L+ + G
Sbjct: 302 NIVTYNTLIGGLCREMKANEANKVMD-QMKSYVINPNLITYNTLIDGFCSVG-------- 352
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
K+ + + R L SRGLS + T N L+ R KG
Sbjct: 353 ------------KLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCR-KG------------ 387
Query: 224 GLDSDATAGIGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
T+G K VK + ++P+ T+ L+ F R E + M LG PD
Sbjct: 388 -----DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPD 442
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
++YSVL+ FC + +M EA +L++ M +K +E + V YNT+I G+C+ G RA FR
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFR 502
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+M + + ++ +L+ C+ + A + M G +P + ++
Sbjct: 503 DMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLI 554
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
++ S +E ++N Y ++ +DS+I +N+M KGF P + L+ + +
Sbjct: 91 KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWC 150
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+K L S+ +IKG CE G++E++ + E+ GF P++ IY+ IDG
Sbjct: 151 FFNESKIKVVL--DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGC 208
Query: 469 MKEGNVEMATMLRKEM 484
K+G +E A L EM
Sbjct: 209 CKKGEIEKAKDLFFEM 224
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 136/259 (52%), Gaps = 2/259 (0%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
+ DA AG+ K+++ V P V T+ L+ G R G KVE V+ EM R D Y Y
Sbjct: 198 NDDAVAGLLKEMENR-GVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFY 256
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
S ++ +C +R A ++++E VE + Y +I GFC+IG++ AE +M L
Sbjct: 257 SAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQL 316
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
GV + + F +++GYCR G V+ A+ + M + G E + T L LC R+ +
Sbjct: 317 RGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMED 376
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
A +L K G+ P SY LI +EG M EA ++ +M GKG PS+ Y+ I
Sbjct: 377 AKKLLHIMAEK-GVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMI 435
Query: 466 DGYMKEGNVEMATMLRKEM 484
DGY+K G++ A +KEM
Sbjct: 436 DGYIKNGSIREAERFKKEM 454
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 1/220 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N FN ++ G+ R G EK ++ M ++G E D Y+Y+ L C RM +A+KL
Sbjct: 322 NQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLL 381
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M +K V + V+Y T+I + G+M A FR+M G S VT+ +++GY +
Sbjct: 382 HIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKN 441
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + A +M +KG P+ T L+ C +V AL + + + G P +
Sbjct: 442 GSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFE-EMKHRGTKPNVVA 500
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
Y L+ GL +EG+ EEA ++ +M+ G P +YS +
Sbjct: 501 YTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLV 540
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 1/234 (0%)
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
GF + G+ + + E+ R G + Y+ L+ + +R L +EM ++ VE
Sbjct: 157 GFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEP 216
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
V Y ++ G G++++ E + EM V + ++N YCR G+V A V+
Sbjct: 217 TVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVF 276
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
++ G EP T LI C K EA ++L A + G+ + + +I G C
Sbjct: 277 DECVGHGVEPNERTYGALINGFC-KIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCR 335
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G +E+AL+++A M G E + Y+ G + +E A L M E V
Sbjct: 336 HGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 7/204 (3%)
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
S SV++ FC+ + +A L +E+ V + YN+++ + +EM
Sbjct: 150 SASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEM 209
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DK 400
GVE + T+ LV+G RAGD+ VY++M RK + +I C +
Sbjct: 210 ENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNV 269
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
RR E D V G+ P E++Y LI G C+ G++E A + A+M +G + +
Sbjct: 270 RRASEVFD----ECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIV 325
Query: 461 YSAFIDGYMKEGNVEMATMLRKEM 484
++ IDGY + G VE A ++ M
Sbjct: 326 FNTMIDGYCRHGMVEKALEIKAVM 349
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 159/311 (51%), Gaps = 14/311 (4%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ K+ DI+ + RG+S V T N LI + + Y+ +DA I
Sbjct: 176 VGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYK---------ADA---I 223
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
K++ R + PN TFN L+ GF ++ V+ EM R G +P+ +Y+ L+ C
Sbjct: 224 LKEM-RADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLC 282
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
++ EA L ++M + ++ +++ +N ++ GFC+ + +A E F +M G+ +
Sbjct: 283 NNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVT 342
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ L++ YC+ +++ A +Y M KG P+ ST LI LC K + A +++
Sbjct: 343 TYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEM 402
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
K L +Y LI LC +G+M++AL++ EM KG +PS Y+ IDGY KEGN
Sbjct: 403 DTKH-LKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGN 461
Query: 474 VEMATMLRKEM 484
+ A LR +M
Sbjct: 462 LRAALNLRSQM 472
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 125/230 (54%), Gaps = 1/230 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN+ T NAL+ GF + ++ +++ +M + G P+ +Y++L+ +C++ M +A
Sbjct: 302 LKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAF 361
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ M K V DV YN +I G C G++ A EM +++ +T+ L++
Sbjct: 362 ALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSL 421
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G++ A+ + ++MCRKG +P T +I C + + AL+ L++++ K G
Sbjct: 422 CNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALN-LRSQMEKVGRLAN 480
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+Y LIKG C++ K+E+A + EM+ KG P+ Y + M++G
Sbjct: 481 VATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 103/201 (51%), Gaps = 4/201 (1%)
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
+L+ + + R R + ++ D ++ V + N ++ G ++GE+ E ++EM
Sbjct: 98 ILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRR 157
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV--- 403
+E + ++F ++NG C+ G ++ A + DM +G T LI C ++
Sbjct: 158 RIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKM 217
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
++A ILK + G+ P E ++ LI G C++ + A+KV AEM +G +P++ Y++
Sbjct: 218 YKADAILK-EMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNS 276
Query: 464 FIDGYMKEGNVEMATMLRKEM 484
I+G G V AT LR +M
Sbjct: 277 LINGLCNNGKVNEATALRDQM 297
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
E F+ G++ S + L++G + G++ VY +M R+ EP + ++I L
Sbjct: 114 EAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGL 173
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA---EMVGKGF 454
C ++ +A DI++ V+ G+ +Y LI G C+ GK+ + K A EM G
Sbjct: 174 CKVGKLNKAGDIIEDMKVR-GVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGI 232
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
P+ ++ IDG+ K+ NV A + EM V+
Sbjct: 233 CPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVK 268
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 89/192 (46%), Gaps = 21/192 (10%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV-----------F 223
E +E + R+++ +G+ VST N LI + R + + + E+ +
Sbjct: 355 ENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITY 414
Query: 224 GLDSDATAGIGKDVKRVVRV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
+ D+ G ++K+ +R+ +P+ T+N ++ G+ +EG ++ +M
Sbjct: 415 NILIDSLCNKG-EMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQME 473
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
++G + +Y+VL+ FC++ ++ +A L EM +K + + + Y + E G +
Sbjct: 474 KVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVP 533
Query: 335 RAEEFFREMGLS 346
E ++ +S
Sbjct: 534 DIEGHLYKVAVS 545
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 185/394 (46%), Gaps = 29/394 (7%)
Query: 103 HSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFD 162
H L +A H+ G AR ++ A+R P P E + TY+ S P FD
Sbjct: 151 HLLRCFAVAAHLAVLRGGGGAARAILSRAVRFPS--PHRHFVEHYISTYKTFSSDPASFD 208
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
L+ C ++R L G+S CNA++ + + + E+++E+
Sbjct: 209 FLLLCL----------PSAPLLRRLRQYGISPSPEACNAVLSRLPLDEAI----ELFQEL 254
Query: 223 ---------FGLDSDATAGIGKDVKRV---VRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
L + AG KD +++ + P+V T+ L+ G G E +
Sbjct: 255 PHKNVCSYNILLKALCDAGRVKDARQLFDEMASAPDVVTYGILIHGHCALGELENAVKLL 314
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
EM G EP+ Y+ ++A+ C++ + +A ++ E+M + V D Y T++ GFC
Sbjct: 315 DEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNK 374
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G++ A +F EM G+ + VT+ ++NG CRA +++ A + +M + + + T
Sbjct: 375 GDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTY 434
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
VLI C + ++ EA + A +V+ G+ P +Y L GLC++G ++ A ++ EM
Sbjct: 435 TVLIDGYCKRGKMAEAFQMHNA-MVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMS 493
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
KG E + Y++ I+G K G +E A +M
Sbjct: 494 NKGLELNACTYNSLINGLCKAGYLEQAMRTMADM 527
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 133/285 (46%), Gaps = 9/285 (3%)
Query: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVV------RVRPNVHTFNALMVGFYREGAFE 264
GV +Y V L D G D RVV +V + + ++ GF +G
Sbjct: 321 GVEPNATVYTSVVALLCDK--GWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLV 378
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ EM R G D +Y+ ++ C + EAEKL +EM + ++ D V Y +I
Sbjct: 379 SARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLI 438
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G+C+ G+MA A + M GV + VT+ L +G C+ GDV +A + ++M KG E
Sbjct: 439 DGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLE 498
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
T LI LC + +A+ + A + L P +Y LI LC+ G ++ A
Sbjct: 499 LNACTYNSLINGLCKAGYLEQAMRTM-ADMDTACLKPDVYTYTTLIDALCKSGDLDRAHS 557
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ EM+ KG +P++ Y+ ++G+ G VE L M E +
Sbjct: 558 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNI 602
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 3/224 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV T+ AL G ++G + ++ EM+ G E + +Y+ L+ C+ + +A
Sbjct: 462 VTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAM 521
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +M ++ DV Y T+I C+ G++ RA +EM G++ + VT+ L+NG+
Sbjct: 522 RTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGF 581
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA-RVVKFGLFP 421
C +G V+ + + M K P +T L+ + C + + +I K R G P
Sbjct: 582 CMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVG--P 639
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
E +Y LIKG C+ M+EAL EM+ KGF + YSA I
Sbjct: 640 NENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALI 683
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 118/241 (48%), Gaps = 1/241 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+ ++ G R E+ E + EM + D +Y+VL+ +C+ +M EA ++ M
Sbjct: 398 TYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAM 457
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ V +VV Y + G C+ G++ A E EM G+E ++ T+ L+NG C+AG +
Sbjct: 458 VQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYL 517
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A+ DM +P+ T LI LC + A +L+ + K G+ PT +Y
Sbjct: 518 EQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDK-GIKPTIVTYNV 576
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
L+ G C G++E K+ M+ K P+ Y++ + Y E N++ T + K M
Sbjct: 577 LMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRD 636
Query: 489 V 489
V
Sbjct: 637 V 637
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 129/276 (46%), Gaps = 21/276 (7%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGY--EIYREVFGLDSDATAGIG 234
++ +++ + ++GL + T N+LI + + +GY + R + +D+
Sbjct: 482 VQAANELLHEMSNKGLELNACTYNSLINGLCK-----AGYLEQAMRTMADMDTAC----- 531
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
++P+V+T+ L+ + G ++ + EM G +P +Y+VLM FC
Sbjct: 532 --------LKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCM 583
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R+ +KL + M +KN+ + YN+++ +C M E ++ M V + T
Sbjct: 584 SGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENT 643
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ G+C+A ++ A+ +++M +KGF ++ LI L K++ EA ++ +
Sbjct: 644 YNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFH-DM 702
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
K GL Y F I E +E L + E+V
Sbjct: 703 RKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELV 738
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+D AI ++ ++ K + +L+ LCD RV +A + + P +Y
Sbjct: 244 LDEAIELFQELPHKNV----CSYNILLKALCDAGRVKDARQLFD----EMASAPDVVTYG 295
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
LI G C G++E A+K+ EMV G EP+ +Y++ + +G + A + ++M +
Sbjct: 296 ILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQR 355
Query: 488 QV 489
+V
Sbjct: 356 KV 357
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 149/300 (49%), Gaps = 17/300 (5%)
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
E +++ ++ RGL + + N LI + V G+++ E+ V
Sbjct: 459 EEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEM--------------V 504
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
+R ++P+++T+N L+ G G E+ +W E + G PD Y+Y +++ +C+ R
Sbjct: 505 RR--GIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANR 562
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ E EKL++EM +E + V Y T+I +CE G M A +M G+ +S T+
Sbjct: 563 VEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSS 622
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++G G VDSA + ++M ++G P LIG C ++ + IL+ +
Sbjct: 623 LIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSIN- 681
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ P + +Y +I G C+ G M+ A K+ EM KG P Y+A +G+ KEG +E A
Sbjct: 682 NVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEA 741
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 204/512 (39%), Gaps = 113/512 (22%)
Query: 38 SHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQ--IALGLKN-NPHLALRFFSF 94
+ +LI +V S+L++ S + L L L+P +F Q +A+G N NP A FF F
Sbjct: 56 NQSLINSVFSILSNPSFDSSKSKQLLL---HLSPHEFDQCFLAIGSNNVNPRTAFNFFHF 112
Query: 95 TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYREC 154
L PA V V L L V ++
Sbjct: 113 ASET---------------------LFEPAVAVTVVDL----------LIHVYSTQFKHL 141
Query: 155 GSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVIS 214
G VF+L +L ++GL + TCN L+ + + V
Sbjct: 142 GFG-VVFELF--------------------SLLANKGLFPSLKTCNFLLSSLVKANEVKM 180
Query: 215 GYEIYREVF--GLDSDA-----------TAGIGKDVKRVVR------VRPNVHTFNALMV 255
Y+++ + G+ D T G D + R V PNV T+N ++
Sbjct: 181 SYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIH 240
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G + G ++ +M + +P +Y VL+ + R EA + +EM D+
Sbjct: 241 GLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAP 300
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV------- 368
+ V YNT+I G+C IG ++ A + +M +G+ +SVT L+ GYC++ +
Sbjct: 301 NNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLL 360
Query: 369 ----------------------------DSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
DSA+L +M + F+P + +L+ LC
Sbjct: 361 EEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQN 420
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+ EA++ L R+++ G + LI GLCE G EEA K+ EM+ +G
Sbjct: 421 GKQSEAIE-LWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSIS 479
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
Y+ I KEG VE L++EM ++ +
Sbjct: 480 YNTLILACCKEGKVEEGFKLKEEMVRRGIQPD 511
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 180/431 (41%), Gaps = 45/431 (10%)
Query: 66 RSGLTPT--QFSQIALGLKNNPHLALRF-FSFTQHKSLCKHSLSSYATIIHILSRARLIG 122
+ G+ P ++ I GL N L F F K K SL +Y +I+ L +
Sbjct: 225 KVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFD 284
Query: 123 PARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETC 180
A ++K + G AP V++ LI + NI T
Sbjct: 285 EAN--------------------CILKEMSDRGYAPNNVVYNTLIDGYCRIGNIS---TA 321
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
+ I ++S G+S TCN+LI + + + E+ T G V
Sbjct: 322 LQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEML------TGG------GV 369
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ N TF +++ + F+ +EM +P+ ++L++ C+ + E
Sbjct: 370 I----NQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSE 425
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +LW + +K + V N +I G CE G A + +EM G+ S+++ L+
Sbjct: 426 AIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLIL 485
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
C+ G V+ + +M R+G +P+ T +L+ LC+ ++ EA L K G F
Sbjct: 486 ACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEA-GGLWHECKKNGNF 544
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y +I G C+ ++EE K+ EMV E + +Y I Y + GN+ A L
Sbjct: 545 PDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRL 604
Query: 481 RKEMFENQVRQ 491
R +M + Q
Sbjct: 605 RDDMRSRGIPQ 615
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 7/248 (2%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T NAL+ G G+ E+ + EM G D SY+ L+ C+E ++ E KL
Sbjct: 441 NTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLK 500
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EEM + ++ D+ YN ++ G C +G++ A + E +G + T+ +++GYC+A
Sbjct: 501 EEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKA 560
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK---RRVFEALDILKARVVKFGLFPT 422
V+ ++ +M E LI C+ R F D +++R G+ T
Sbjct: 561 NRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSR----GIPQT 616
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI GL G ++ A ++ EM +G P++ Y+A I GY K G + + +
Sbjct: 617 SATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQ 676
Query: 483 EMFENQVR 490
EM N V
Sbjct: 677 EMSINNVH 684
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 112/250 (44%), Gaps = 1/250 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T N L+ + + V+ M G PD Y +S ++ FC R+ +A +L
Sbjct: 160 PSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIEL 219
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M V +VV YN II G C+ G + A +F +M V+ S VT+ L+NG +
Sbjct: 220 FRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVK 279
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D A + +M +G+ P LI C + AL I + ++ G+ P
Sbjct: 280 LERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQI-RDDMISNGISPNSV 338
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ LI+G C+ +ME A + EM+ G + +++ I + + A + EM
Sbjct: 339 TCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEM 398
Query: 485 FENQVRQEDG 494
+ DG
Sbjct: 399 LLRNFKPNDG 408
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+++L+ G G + + EM + G P+ Y+ L+ +C+ +M + + + +EM
Sbjct: 619 TYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEM 678
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
NV + + Y +I G C++G M A + EM G+ +VT+ L NG+C+ G +
Sbjct: 679 SINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKM 738
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLI 394
+ A+ V + M G + T LI
Sbjct: 739 EEALKVCDLMSTGGISLDDITYTTLI 764
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 21/229 (9%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
KLF+ +V E + V+ LI+ E N+ + D +R SRG+ +T ++
Sbjct: 568 KLFQEMVTMKIEQNAV--VYGTLIRAYCENGNMREAFRLRDDMR---SRGIPQTSATYSS 622
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
LI +S V S ++ E+ R + PNV + AL+ G+ + G
Sbjct: 623 LIHGLSNIGLVDSANQLLDEM----------------RKEGLSPNVVCYTALIGGYCKLG 666
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
KV+ + EM+ P+ +Y++++ C+ M+ A KL EM K + D V YN
Sbjct: 667 QMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYN 726
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
+ GFC+ G+M A + M G+ +T+ L++G+ + V S
Sbjct: 727 ALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHKPLTVSS 775
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 192/400 (48%), Gaps = 27/400 (6%)
Query: 105 LSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLL 164
L SY T+IH L +++ A+ +I+V + +F V+++T S +VF L
Sbjct: 1 LHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAVILETKGTQRSDIYVFSGL 60
Query: 165 IKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG 224
I LE + C + R V TC ++ + + K + Y+E+
Sbjct: 61 ITAYLESGFLRDAIECYRLTR---EHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEI-- 115
Query: 225 LDSDATAGI------------GKDVKRVVRV---------RPNVHTFNALMVGFYREGAF 263
L+S A + +D++ V RP+V ++N LM G+ R G
Sbjct: 116 LESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 175
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
++ + M G +PD Y+YSVL+ C+E +M +A +L++EM K + + V + T+
Sbjct: 176 DEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 235
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M KG
Sbjct: 236 IDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGL 295
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
+P+ T LI C + + A + K R+++ + + +Y LI GLC+EG+ +A
Sbjct: 296 KPDKITYTALIDGCCKEGDLDTAFEHRK-RMIQENIRLDDVAYTALISGLCQEGRSVDAE 354
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
K+ EM+ G +P Y+ I+ + K+G+V + L KE
Sbjct: 355 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 394
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 7/212 (3%)
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D Y +S L+ + E +R+A + + R+ ++ ++ F+
Sbjct: 53 DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 112
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG---EL 397
+E+ SG +S F L++ +C+ D+ A V++ + + G P + L+ L
Sbjct: 113 KEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 172
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
D F LK+ + G+ P +Y LI GLC+E KM++A ++ EM+ KG P+
Sbjct: 173 GDLDEGFR----LKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPN 228
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ IDG+ K G V++A + K+M +
Sbjct: 229 GVTFTTLIDGHCKNGRVDLALEIYKQMLSQSL 260
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 186/400 (46%), Gaps = 29/400 (7%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
SY T+IH L +++ A+ +I+V + +F +++T S +VF LI
Sbjct: 2 SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 61
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
LE + C + R V + C ++ + + K + Y+E+
Sbjct: 62 XYLESGFLRDAIECYRLTR---EHKFWVPLDXCRKVLEHLMKLKYFKLVWGFYKEILECG 118
Query: 227 SDATAGIGK----------DVKRVVRV---------RPNVHTFNALMVGFYREGAFEKVE 267
A+ D++ V RP+V +FN LM G+ R G ++
Sbjct: 119 YPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 178
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
+ M G +PD Y+YSVL+ C+E +M +A +L++EM DK + + V + T+I G
Sbjct: 179 RLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGH 238
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ G + A E +++M + +T+ L G C+ GD+ A + ++M KG +P+
Sbjct: 239 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDK 298
Query: 388 STIEVLIGELC---DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
T LI C D FE + R+++ + + Y LI GLC+EG+ +A K
Sbjct: 299 ITYTTLIDGCCKEGDMETAFEH----QKRMIQENIRLDDVVYTALISGLCQEGRSVDAEK 354
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ EM+ G +P+ Y+ I+ + K+G+V + L KEM
Sbjct: 355 MLREMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKEM 394
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 36/170 (21%)
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+N ++ FC+ G++ A+ F + G+ S V+F L+NGY R GD+D + N M
Sbjct: 126 FNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMH 185
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
G +P+ T Y LI GLC+E KM
Sbjct: 186 ASGVQPDVYT------------------------------------YSVLINGLCKESKM 209
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++A ++ EM+ KG P+ ++ IDG+ K G V++A + K+M +
Sbjct: 210 DDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL 259
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATA-- 231
+++ ++I + ++S+ LS + T N L + + + + +++ E+ GL D
Sbjct: 243 RVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYT 302
Query: 232 ----GIGKD---------VKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
G K+ KR+++ +R + + AL+ G +EG E + EM +
Sbjct: 303 TLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSV 362
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
G +P+ +Y++++ FC++ + KL +EM+
Sbjct: 363 GLKPNXGTYTMIINEFCKKGDVWTGSKLLKEMQ 395
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 192/425 (45%), Gaps = 31/425 (7%)
Query: 91 FFSFTQH--KSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ S +H+L SY T+IH L +++ A+ +I+V + +F +
Sbjct: 3 FFTWLSXPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIX 62
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+T S +VF LI LE + C R+ V TC ++ + +
Sbjct: 63 ETXGTQRSDJYVFSGLITAYLESGFLRDAIECY---RLTXEHKFWVPFDTCRKVLEHLMK 119
Query: 209 GKGVISGYEIYREVFGLD----------------SDATAGIGKDVKRVVR---VRPNVHT 249
K + Y E+ D J + V + +RP+V +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVS 179
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N LM G+ R G ++ + M G +PD Y+YSVL+ C+E + +A +L++EM
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEML 239
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + + V + T+I G C+ G + A E +++M + +T+ L+ G C+ GD+
Sbjct: 240 VKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + ++M KG +P+ T LI C + + A + K R+++ Y L
Sbjct: 300 QAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXK-RMIQENXRLDXVXYTAL 358
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I GLC EG+ +A K+ EM+ G +P Y+ I+ + K+G+V + L KEM
Sbjct: 359 ISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM----- 413
Query: 490 RQEDG 494
Q DG
Sbjct: 414 -QRDG 417
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ + EM+ G +PD +Y+ L+ C+E + A
Sbjct: 278 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAF 337
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N D V Y +I G C G AE+ REM G++ + T+ ++N +
Sbjct: 338 EHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEF 397
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ GDV + +M R G P T VL+
Sbjct: 398 CKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + + + +D + G+
Sbjct: 262 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL------IDEMSXKGL-- 313
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G +EG AFE + + E RL D Y+ L++
Sbjct: 314 --------KPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRL----DXVXYTALISG 361
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C E R +AEK+ EM ++ D Y II FC+ G++ + + +EM G S
Sbjct: 362 LCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 422 VVTYNVLMNG 431
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 131/240 (54%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N L+ GF ++ V+ EM R G P+ +Y++L+ C + ++ EA L
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVAL 285
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M ++E +VV +N +I GFC+ + A F +M GV+ +++T+ L++ YC+
Sbjct: 286 RDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCK 345
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G ++ A +YN M +G PE ST LI LC K V A ++ V K L
Sbjct: 346 DGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSK-KLSADVV 404
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI LC++G+ +A+K+ EM KG PS Y+ +DGY +EGN+ A ++R M
Sbjct: 405 TYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRM 464
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 198/425 (46%), Gaps = 26/425 (6%)
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL 143
+P L LR+F+++Q + HSL I++ L+ + R + ++ ++ +
Sbjct: 11 DPELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKYEKDYSVSAI 70
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
F + + + D+L+ V+N+ KI + + G + + +CN L+
Sbjct: 71 FHAISMSGDSFCVNSILADMLVLAF--VRNL-KILRGFEAFKRAGDYGFKLSLISCNPLL 127
Query: 204 WEVSRGKGVISGYEIYREV-----------FGLDSDATAGIGK-----DV---KRVVRVR 244
+ + +YRE+ F + + +GK DV +V V
Sbjct: 128 SGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVS 187
Query: 245 PNVHTFNALMVGFY---REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
PNV T+N L+ G+ R G K + + EM G P+ +Y++L+ FC++ + A
Sbjct: 188 PNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGA 247
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+++ EM+ + + +VV YN +I G C G++ A +M S +E + VT L+NG
Sbjct: 248 MRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLING 307
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C+ V+ AI ++NDM ++G +P T LI C R+ +A L ++ G+FP
Sbjct: 308 FCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAF-ALYNMMIDRGIFP 366
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI GLC +G ++ A + EMV K + Y+ ID K+G A L
Sbjct: 367 EVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLL 426
Query: 482 KEMFE 486
EMFE
Sbjct: 427 DEMFE 431
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 132/245 (53%), Gaps = 4/245 (1%)
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
N L+ G +E +E V+ EM + E + S+++++ C+ ++ A + E+M+
Sbjct: 124 NPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKV 183
Query: 311 KNVEHDVVAYNTIIGGFCE---IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
V +V+ YNT+I G+C+ IG+M +A+ +EM G+ + VT+ L++G+C+ +
Sbjct: 184 WGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDEN 243
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
V A+ V+ +M R+G P T +LI LC +V EA+ L+ ++V L P ++
Sbjct: 244 VSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAV-ALRDQMVSSDLEPNVVTHN 302
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
LI G C+ + EA+ + +M +G +P+ Y+ ID Y K+G +E A L M +
Sbjct: 303 VLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDR 362
Query: 488 QVRQE 492
+ E
Sbjct: 363 GIFPE 367
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 17/217 (7%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN T+ L+ + ++G E ++ M G P+ +Y+ L+A C + ++ A
Sbjct: 329 VDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAAR 388
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EM K + DVV YN +I C+ GE +A + EM G+ S VT+ L++GY
Sbjct: 389 SLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGY 448
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G++ +A++V M RKG + T VLI C K R+ +A +L +++ GL P
Sbjct: 449 CREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLN-EMLERGLVPN 507
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+Y ++ EM+ KGF P +E
Sbjct: 508 RTTYEI----------------IKEEMMEKGFVPDIE 528
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 174/350 (49%), Gaps = 23/350 (6%)
Query: 142 KLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC 199
K F++LV+ RE G +P ++ LI C + IEK + D+ + GL T
Sbjct: 181 KSFDLLVE-LREFGFSPNVVIYTTLIDGCCKRGEIEKAK---DLFFEMGKFGLVANEWTY 236
Query: 200 NALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYR 259
LI + + G+E+Y + + D V PN++T+N +M +
Sbjct: 237 TVLIHGLFKNGIKKQGFEMYEK---MQEDG-------------VFPNLYTYNCVMNQHCK 280
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
+G + ++ EM G + +Y+ L+ C E + EA K+ ++M+ + +++
Sbjct: 281 DGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLIT 340
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YNT+I GFC +G++ +A R++ G+ S VT+ LV+G+C+ GD A V +M
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME 400
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+G +P T +LI + +A+ L++ + + GL P +Y LI G C +G+M
Sbjct: 401 ERGIKPSKITYTILIDTFARMDNMEKAIQ-LRSPMEELGLTPDVHTYSVLIHGFCIKGQM 459
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EA ++ MV K EP+ IY+ + GY KEG+ A L +EM E ++
Sbjct: 460 NEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKEL 509
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 123/250 (49%), Gaps = 1/250 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
++V +V++F ++ G G EK D+ VE+ G P+ Y+ L+ C+ + +
Sbjct: 157 IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEK 216
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A+ L+ EM + + Y +I G + G + E + +M GV + T+ ++N
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
+C+ G A ++++M +G T LIG LC + + EA ++ ++ G+
Sbjct: 277 QHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMD-QMKSDGIN 335
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y LI G C GK+ +AL + ++ +G PSL Y+ + G+ K+G+ A +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395
Query: 481 RKEMFENQVR 490
KEM E ++
Sbjct: 396 VKEMEERGIK 405
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 116/243 (47%), Gaps = 8/243 (3%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + FN L+ +F + + E +++ + D YS+ +++ CE + ++ L
Sbjct: 127 PGSNCFNNLLTFVVGSSSFNQWWRFFNE-SKIKVDLDVYSFGIVIKGCCEAGEIEKSFDL 185
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+R+ +VV Y T+I G C+ GE+ +A++ F EMG G+ ++ T+ L++G +
Sbjct: 186 LVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFK 245
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV---FEALDILKARVVKFGLFP 421
G +Y M G P T ++ + C R F+ D ++ R V +
Sbjct: 246 NGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIV- 304
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI GLC E K EA KV +M G P+L Y+ IDG+ G + A L
Sbjct: 305 ---TYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361
Query: 482 KEM 484
+++
Sbjct: 362 RDL 364
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 129/292 (44%), Gaps = 41/292 (14%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
++ +Y T+I L R A V+ ++S +P L + L+ + CG
Sbjct: 302 NIVTYNTLIGGLCREMKANEANKVMD-QMKSDGINPNLITYNTLIDGF--CG-------- 350
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
+ K+ + + R L SRGLS + T N L+ SG+
Sbjct: 351 ----------VGKLGKALSLCRDLKSRGLSPSLVTYNILV----------SGF------- 383
Query: 224 GLDSDATAGIGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
T+G GK VK + ++P+ T+ L+ F R EK + M LG PD
Sbjct: 384 -CKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPD 442
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
++YSVL+ FC + +M EA +L++ M K +E + V YNT++ G+C+ G RA FR
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFR 502
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
EM + + ++ +++ C+ A + M G +P S + ++
Sbjct: 503 EMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 20/253 (7%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREV-----------FGLDSDATAGIGKDVK 238
RG+S + T N LI + R ++ ++ + D G+GK K
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 239 RVVRVR--------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
+ R P++ T+N L+ GF ++G V EM G +P +Y++L+
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILID 416
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
F M +A +L M + + DV Y+ +I GFC G+M A F+ M +E
Sbjct: 417 TFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEP 476
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ V + +V GYC+ G A+ ++ +M K P ++ +I LC +R+ EA ++
Sbjct: 477 NKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLV 536
Query: 411 KARVVKFGLFPTE 423
+ +++ G+ P++
Sbjct: 537 E-KMIDTGIDPSD 548
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
E+ S +E ++N Y ++ +DS+I +N+M KGF P + L+ + +
Sbjct: 91 ETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWR 150
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+K L S+ +IKG CE G++E++ + E+ GF P++ IY+ IDG
Sbjct: 151 FFNESKIKVDL--DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGC 208
Query: 469 MKEGNVEMATMLRKEM 484
K G +E A L EM
Sbjct: 209 CKRGEIEKAKDLFFEM 224
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 172/343 (50%), Gaps = 30/343 (8%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE------------- 221
++ V +V ++ G + NA+I + + K V ++ ++E
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 222 ---VFGLD-----SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
V GL SDA + +K+ ++ PNV T++AL+ F + G + ++++ EM
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKK--KITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
R+ +PD +YS L+ C R+ EA ++++ M K DVV+YNT+I GFC+ +
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+ FREM G+ S++VT+ L+ G+ +AGDVD A ++ M G P+ T +L
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 394 IGELCDKRRVFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+G LCD + +AL I ++ R + + +Y +I+G+C+ GK+EEA + +
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIV----TYTTVIRGMCKTGKVEEAWSLFCSLS 462
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
KG +P + Y+ + G +G + L +M + + + D
Sbjct: 463 LKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 128/257 (49%), Gaps = 2/257 (0%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
D +GK ++ V+ +R +++TFN ++ F + +M +LG EPD +
Sbjct: 102 DVVISLGKKME-VLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGS 160
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ FC R+ +A L ++M + + D+VAYN II C+ + A +FF+E+ G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ + VT+ LVNG C + A + +DM +K P T L+ +V EA
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++ + +V+ + P +Y LI GLC +++EA ++ MV KG + Y+ I+G
Sbjct: 281 ELFE-EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 468 YMKEGNVEMATMLRKEM 484
+ K VE L +EM
Sbjct: 340 FCKAKRVEDGMKLFREM 356
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 113/232 (48%), Gaps = 5/232 (2%)
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
R+ D++ +M + P ++ L++ + ++ L ++M + +D+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+N +I FC +++ A +M G E VT LVNG+CR V A+ + + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
G++P+ +I LC +RV +A D K + + G+ P +Y L+ GLC +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK-EIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+A ++ ++M+ K P++ YSA +D ++K G V A KE+FE VR
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA----KELFEEMVR 288
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 160/363 (44%), Gaps = 48/363 (13%)
Query: 34 PSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIAL--GLKNNPHL--AL 89
P ++N A + SL R ++ + R G+ P + AL GL N+ A
Sbjct: 188 PDIVAYN--AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVK 149
R S K + + ++ Y+ ++ + + A+++ +R DP + + L+
Sbjct: 246 RLLSDMIKKKITPNVIT-YSALLDAFVKNGKVLEAKELFEEMVRMSI-DPDIVTYSSLIN 303
Query: 150 TYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG 209
CL ++I+ + +++S+G V + N LI +
Sbjct: 304 GL----------------CLH----DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 210 KGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
K V G +++RE+ GL S N T+N L+ GF++ G +K +
Sbjct: 344 KRVEDGMKLFREMSQRGLVS------------------NTVTYNTLIQGFFQAGDVDKAQ 385
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
+ + +M G PD ++Y++L+ C+ + +A ++E+M+ + ++ D+V Y T+I G
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ G++ A F + L G++ VT+ +++G C G + +Y M ++G
Sbjct: 446 CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Query: 388 STI 390
T+
Sbjct: 506 CTL 508
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 215/481 (44%), Gaps = 58/481 (12%)
Query: 40 NLIATVVSLLTHHRSKSRWNHLLS-LCRSGLTPTQFSQIALGLKNN---PHLALRFFSFT 95
+LI +V +++ K WN+LL S LT T Q+ L LK + P FF +
Sbjct: 13 HLIESVCAIIV----KGDWNNLLKPKTASTLTSTTIHQVILHLKQHRYEPFFIFHFFKWA 68
Query: 96 QHKSLCKHSLSSYATIIHILSRARLIGPARDVI-----RVALRSP---------ENDPKL 141
Q HSL S ++IH+L++ R A+ V+ R L SP +DP++
Sbjct: 69 QSIPHYTHSLHSSWSMIHMLTKHRHFKTAQQVLDKMAQREILSSPSVLTSLVRIHDDPEV 128
Query: 142 K--LFEVLVKTY---RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKV 196
+ +V Y + A VF+ + C L+ + C ++ L+ G++
Sbjct: 129 NSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLK----PHLHACTVLMNSLLKDGIT--- 181
Query: 197 STCNALIWEVSR---GKGVISGYEIYREVFGLDSDATAGIGKDVKR---------VVRVR 244
+++W+V + GV+ +Y + S + +DV+R V V
Sbjct: 182 ----SMVWKVYKRMVQDGVVPNIYVYNCLIHACSKS-----RDVERAEFILNEMEVKGVV 232
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ + ++G + V +M R G D SY+ L+ FC+E +MREA ++
Sbjct: 233 PDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRM 292
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ E++D H V Y T+I G+C+ E A M G+ VT+ ++ C
Sbjct: 293 FGEIKDAIPNH--VTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCS 350
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A + ++M + + + T LI C + AL K ++++ GL P
Sbjct: 351 DGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALK-FKTKMLEAGLTPNSF 409
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C+ ++E A ++ M+ GF P+ YS +D Y K+ N + L E
Sbjct: 410 TYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEF 469
Query: 485 F 485
Sbjct: 470 L 470
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 115/247 (46%), Gaps = 3/247 (1%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N H + +++ + + V+ +M+ +P ++ +VLM ++ K++
Sbjct: 129 NSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVY 188
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M V ++ YN +I + ++ RAE EM + GV T+ L+ YC+
Sbjct: 189 KRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKK 248
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G A+ V + M R+G + + LI C + ++ EA+ + +K + P +
Sbjct: 249 GLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGE--IKDAI-PNHVT 305
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI G C+ + EEAL+++ MV KG P + Y++ + +G + A L EM
Sbjct: 306 YTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMS 365
Query: 486 ENQVRQE 492
E +V+ +
Sbjct: 366 ERKVQAD 372
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 98/244 (40%), Gaps = 19/244 (7%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN T+ AL+ GF + E +++ M G P+ +YS ++ +C++
Sbjct: 404 LTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVL 463
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +E K ++ Y +I C+I + AE+ M G+ SV + L Y
Sbjct: 464 ALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSY 523
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR--------V 414
++G+ ++A + +M R+ I V I R F ALD + + V
Sbjct: 524 WKSGNTNAASDMLEEMARRRL-----MITVKI------YRCFSALDASQNKVSQMFWDHV 572
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
V+ GL Y G L V G ++P L++++ + E V
Sbjct: 573 VERGLMSRNTMYKIQQMPFISSGYQRVFLHVFTCHAGTLYKPCLKLFNLISNACDHENQV 632
Query: 475 EMAT 478
E++
Sbjct: 633 EISN 636
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 1/246 (0%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
+ + + PN TFN ++ R G +K +V+ E+ C PD Y+YS LM C+E R+
Sbjct: 162 KSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERI 221
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EA L +EM+ + ++VA+N +I C+ G++ RA + M L G + VT+ L
Sbjct: 222 DEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNAL 281
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
V+G C G ++ A+ + N M P T LI + R + +L + + G
Sbjct: 282 VHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEAR-G 340
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
E Y LI GLC+EGK +A+++ EMVGKG P+ +YSA IDG +EG ++ A
Sbjct: 341 HRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEAR 400
Query: 479 MLRKEM 484
EM
Sbjct: 401 GFLSEM 406
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 185/443 (41%), Gaps = 53/443 (11%)
Query: 78 ALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR--VALRSP 135
A G + P A+ F + CK ++ S+ ++++++ + L A + VA +S
Sbjct: 105 AYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSL 164
Query: 136 ENDPKLKLFEVLVKT------------------YRECGSAPFVFDLLIK-CCLEVKNIEK 176
P F +++K R C + + L+ C E E+
Sbjct: 165 NIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKE----ER 220
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
I+ V ++ + G + N LI + + + ++ +F
Sbjct: 221 IDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMF------------- 267
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
+K V PN T+NAL+ G +G EK + +M C P+ ++ L+ F +
Sbjct: 268 LKGCV---PNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQG 324
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
R + ++ + + + Y+++I G C+ G+ +A E ++EM G +++ +
Sbjct: 325 RASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYS 384
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV- 415
L++G CR G +D A ++M KG+ P T L+ R FEA D KA +V
Sbjct: 385 ALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLM------RGYFEAGDSHKAILVW 438
Query: 416 ----KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
E Y LI GLC++GK EAL V +M+ +G + + YS+ I G+
Sbjct: 439 KEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNA 498
Query: 472 GNVEMATMLRKEMF-ENQVRQED 493
VE L +M + V Q D
Sbjct: 499 NLVEQGLKLFNQMLCQGPVVQPD 521
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 3/226 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TF L+ GF +G V V + G + Y YS L++ C+E + +A +L
Sbjct: 308 PNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMEL 367
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W+EM K + + Y+ +I G C G++ A F EM G +S T+ L+ GY
Sbjct: 368 WKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFE 427
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AGD AILV+ +M +LI LC + EAL + K +++ G+
Sbjct: 428 AGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWK-QMLSRGIKLDVV 486
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKG--FEPSLEIYSAFIDGY 468
+Y +I G C +E+ LK+ +M+ +G +P + Y+ ++ +
Sbjct: 487 AYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAF 532
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 161/372 (43%), Gaps = 15/372 (4%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECG----S 156
C +Y+T++H L + I A ++ ++ P L F VL+ + G +
Sbjct: 201 CAPDNYTYSTLMHGLCKEERIDEAVSLLD-EMQVEGTFPNLVAFNVLISALCKKGDLGRA 259
Query: 157 APFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRG-LSVKVSTCNALIWEVSRGKGVISG 215
A V ++ +K C + T +V L +G L VS N ++ V G
Sbjct: 260 AKLVDNMFLKGC-----VPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFG 314
Query: 216 YEIYREVFGLDSDATAGIGKDVKRVVRV-RPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
I F + A+ G V R R N + +++L+ G +EG F + ++W EM
Sbjct: 315 TLI--NGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMV 372
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
GC P+ YS L+ C E ++ EA EM++K + Y++++ G+ E G+
Sbjct: 373 GKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSH 432
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
+A ++EM + + V + L+NG C+ G A++V+ M +G + + +I
Sbjct: 433 KAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMI 492
Query: 395 GELCDKRRVFEALDILKARVVKFGLF-PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
C+ V + L + + + + P +Y L+ C + + A+ + M+ +G
Sbjct: 493 HGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQG 552
Query: 454 FEPSLEIYSAFI 465
+P F+
Sbjct: 553 CDPDFITCDIFL 564
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+++LM G++ G K VW EMA C + YS+L+ C++ + EA +
Sbjct: 413 PNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMV 472
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG--VESSSVTFEHLVNGY 362
W++M + ++ DVVAY+++I GFC + + + F +M G V+ +T+ L+N +
Sbjct: 473 WKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAF 532
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEV---------------------LIGELCDKR 401
C + AI + N M +G +P+ T ++ L+ L ++
Sbjct: 533 CIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQ 592
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
R A I++ + KF L P ++ +++ +C+ + +A+
Sbjct: 593 RTIGASKIIEVMMHKF-LLPKASTWAMVVQQVCKPKNVRKAI 633
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 195/444 (43%), Gaps = 55/444 (12%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY-RECGSAPFV 160
+H+ SY + + LS ++ + +IR + D +F ++ T C + FV
Sbjct: 98 RHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSN--FV 155
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRM--------------------------------LM 188
FD L+ + + C +VR ++
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEIL 215
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV----------------FGLDSDATAG 232
G KV N LI + + + I+ E+ GL
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275
Query: 233 IGKDVKRVV---RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
G +K+ + R+ P+V T++ L+ G +EG + E ++ EM + G P+ +++ L+
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335
Query: 290 AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
RRM A + +M V+ D+V YNT++ G C++G++ +A + EM + G++
Sbjct: 336 DGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMK 395
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
+T+ L++GYC+ GD++SA+ + M +G + LI C RV +A
Sbjct: 396 PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERT 455
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
L+ +V+ G+ P + +Y +I G C++G ++ K+ EM G +P + Y+ ++G
Sbjct: 456 LR-EMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLC 514
Query: 470 KEGNVEMATMLRKEMFENQVRQED 493
K+G ++ A ML + M V +D
Sbjct: 515 KQGQMKNANMLLEAMLNLGVTPDD 538
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 93/178 (52%), Gaps = 3/178 (1%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D ++V ++P+ T+ L+ G+ +EG E ++ M G D +++ L++ FC +
Sbjct: 387 DEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRD 446
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+R+AE+ EM + ++ D Y +I G+C+ G + + +EM ++G + +T+
Sbjct: 447 GRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITY 506
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
L+NG C+ G + +A ++ M G P+ T +L+ C + A D+LK R
Sbjct: 507 NVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGK---AEDLLKLR 561
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 130/254 (51%), Gaps = 1/254 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V ++ NV T N+L+ G R GAFE VW M + G PD SY L+ + +
Sbjct: 423 VGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFR 482
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A LW ++ + A+NT+I GFC++ +M AEE F M G E VT+ L++
Sbjct: 483 ALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLID 542
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
GYC+ G+V+ A V M ++ P LIG L ++ E +D+L +K GL
Sbjct: 543 GYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLK-GLS 601
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y LI G C+EG++++A +M+ KGF P++ I S + + G ++ A ML
Sbjct: 602 PNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANML 661
Query: 481 RKEMFENQVRQEDG 494
++M V + G
Sbjct: 662 LQKMVNLDVFLDHG 675
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 131/506 (25%), Positives = 216/506 (42%), Gaps = 96/506 (18%)
Query: 73 QFSQ-----IALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDV 127
QFS + L LK NP +L FF +S + +++S+ ++HILSRAR+ R
Sbjct: 57 QFSDYILDSVLLKLKFNPIASLHFFKLASKQSNFRPNVNSHCKLVHILSRARMYDETRSY 116
Query: 128 IR-VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLE---VKN---------- 173
+ + S N L ++ LV+ + + +P VFD+++K E +KN
Sbjct: 117 LNELVTPSKNNYSSLVVWNELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGK 176
Query: 174 ---IEKIETCVDIVRMLMSRGLSVK----------------VSTCNALIWEVSRGKGV-- 212
+ + +C ++ L+ +G S V TC+ ++ + V
Sbjct: 177 LGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNV 236
Query: 213 ---------ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP---------NVHTFNALM 254
G+E+ + D IG D++R V N T L+
Sbjct: 237 AVDFVKEMDYLGFELNVVTYNSLIDGCVSIG-DMERAEMVLKLMGERGILRNKVTLTLLI 295
Query: 255 VGFYREGAFEKVEDVWVEMARL-GCEPDCYSYSVLM-----------AV----------- 291
G+ R+ E+ E V EM R G D Y+Y VL+ AV
Sbjct: 296 KGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGL 355
Query: 292 -------------FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+C+ ++ EAE+L M D ++E + +Y+T++ GFC G + +A
Sbjct: 356 RMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAIS 415
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
+ EM G++S+ VT L+ G CR G + A+ V++ M ++G P+ + L+ L
Sbjct: 416 VYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLF 475
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
F AL L ++ G + ++ +I G C+ KM EA + M GFEP
Sbjct: 476 KMGEFFRAL-ALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDG 534
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEM 484
Y IDGY K GNVE A ++++M
Sbjct: 535 VTYRTLIDGYCKLGNVEEAFKVKEKM 560
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 142/311 (45%), Gaps = 17/311 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K++ V + +++ GL + + CNALI + V + + D
Sbjct: 339 KMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWD--------- 389
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ P ++++ LM GF REG K V+ EM R+G + + +++ L+ C
Sbjct: 390 -------LEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRV 442
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+A +W M + V D V+Y T++ ++GE RA + ++ G S+ F
Sbjct: 443 GAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAF 502
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
++NG+C+ + A +N M GFEP+G T LI C V EA + K ++
Sbjct: 503 NTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKV-KEKME 561
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K + P+ + Y LI GL + K E + + +EM KG P++ Y I G+ EG ++
Sbjct: 562 KEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLD 621
Query: 476 MATMLRKEMFE 486
A +M E
Sbjct: 622 KAFTAYFDMIE 632
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV T+ L+ G+ EG +K + +M G P+ S +++ R+ EA
Sbjct: 600 LSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEAN 659
Query: 303 KLWEEM------------------RDKNVEHDVVA-----------------YNTIIGGF 327
L ++M D N++ +A YN I G
Sbjct: 660 MLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGL 719
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ G++ A++ F + L G + T+ L++GY AG+V+ A + ++M ++G P
Sbjct: 720 CKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNI 779
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI LC + A + +K GL P SY LI G C+ G EAL ++
Sbjct: 780 ITYNALINGLCKSGNLDRAQKLFDKLHLK-GLAPNVISYNILIDGYCKNGNTREALDLRN 838
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+M+ +G PSL YSA I G+ K+G++ AT L EM E
Sbjct: 839 KMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRE 877
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 36/282 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ +N+L+ G ++ +V D+ EM G P+ +Y L+A +C+E R+ +A
Sbjct: 565 ILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAF 624
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV-------------- 348
+ +M +K +V+ + I+ +G + A ++M V
Sbjct: 625 TAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKAD 684
Query: 349 --------------ESS-------SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
ESS SV + + G C++G VD A +++ + +GF P+
Sbjct: 685 DGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDN 744
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI V +A L+ ++K GL P +Y LI GLC+ G ++ A K+
Sbjct: 745 FTYCTLIHGYSAAGNVNDAFS-LRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFD 803
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ KG P++ Y+ IDGY K GN A LR +M + +
Sbjct: 804 KLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGI 845
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
F+ ++ + +G + V+ M +LGC P S + L++ + A +++ +
Sbjct: 150 VFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHI 209
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ DV + ++ +C+ G + A +F +EM G E + VT+ L++G GD+
Sbjct: 210 NRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDM 269
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A +V M +G T+ +LI C + ++ EA +L+ G+ E +Y
Sbjct: 270 ERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGV 329
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI G C KM++A++++ EM+ G +L I +A I+GY K G V A L M +
Sbjct: 330 LIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWD 389
Query: 489 VRQE 492
+ E
Sbjct: 390 LEPE 393
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 112/221 (50%), Gaps = 1/221 (0%)
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
+K+ D E ++ P+ Y++ +A C+ ++ +A+K++ + + D Y T+
Sbjct: 691 QKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTL 750
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I G+ G + A EM G+ + +T+ L+NG C++G++D A +++ + KG
Sbjct: 751 IHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGL 810
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
P + +LI C EALD L+ +++K G+ P+ +Y LI G C++G M +A
Sbjct: 811 APNVISYNILIDGYCKNGNTREALD-LRNKMLKEGISPSLITYSALIYGFCKQGDMGKAT 869
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ EM + ++ + ++G++K G V+ L M
Sbjct: 870 NLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 75/160 (46%), Gaps = 16/160 (10%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++ RGL+ + T NALI + + + +++ D + + PN
Sbjct: 770 MLKRGLAPNIITYNALINGLCKSGNLDRAQKLF----------------DKLHLKGLAPN 813
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V ++N L+ G+ + G + D+ +M + G P +YS L+ FC++ M +A L +
Sbjct: 814 VISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLD 873
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
EMR+ + ++ + ++ G + GE+ + + M ++
Sbjct: 874 EMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMMHIT 913
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 172/343 (50%), Gaps = 30/343 (8%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE------------- 221
++ V +V ++ G + NA+I + + K V ++ ++E
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 222 ---VFGLD-----SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
V GL SDA + +K+ ++ PNV T++AL+ F + G + ++++ EM
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKK--KITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
R+ +PD +YS L+ C R+ EA ++++ M K DVV+YNT+I GFC+ +
Sbjct: 287 VRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+ FREM G+ S++VT+ L+ G+ +AGDVD A ++ M G P+ T +L
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 394 IGELCDKRRVFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+G LCD + +AL I ++ R + + +Y +I+G+C+ GK+EEA + +
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIV----TYTTVIRGMCKTGKVEEAWSLFCSLS 462
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
KG +P + Y+ + G +G + L +M + + + D
Sbjct: 463 LKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 128/257 (49%), Gaps = 2/257 (0%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
D +GK ++ V+ +R +++TFN ++ F + +M +LG EPD +
Sbjct: 102 DVVISLGKKME-VLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGS 160
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ FC R+ +A L ++M + + D+VAYN II C+ + A +FF+E+ G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ + VT+ LVNG C + A + +DM +K P T L+ +V EA
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++ + +V+ + P +Y L+ GLC +++EA ++ MV KG + Y+ I+G
Sbjct: 281 ELFE-EMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 468 YMKEGNVEMATMLRKEM 484
+ K VE L +EM
Sbjct: 340 FCKAKRVEDGMKLFREM 356
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 113/232 (48%), Gaps = 5/232 (2%)
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
R+ D++ +M + P ++ L++ + ++ L ++M + +D+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+N +I FC +++ A +M G E VT LVNG+CR V A+ + + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
G++P+ +I LC +RV +A D K + + G+ P +Y L+ GLC +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK-EIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+A ++ ++M+ K P++ YSA +D ++K G V A KE+FE VR
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA----KELFEEMVR 288
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 160/363 (44%), Gaps = 48/363 (13%)
Query: 34 PSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIAL--GLKNNPHL--AL 89
P ++N A + SL R ++ + R G+ P + AL GL N+ A
Sbjct: 188 PDIVAYN--AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVK 149
R S K + + ++ Y+ ++ + + A+++ +R DP + + LV
Sbjct: 246 RLLSDMIKKKITPNVIT-YSALLDAFVKNGKVLEAKELFEEMVRMSI-DPDIVTYSSLVN 303
Query: 150 TYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG 209
CL ++I+ + +++S+G V + N LI +
Sbjct: 304 GL----------------CLH----DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 210 KGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
K V G +++RE+ GL S N T+N L+ GF++ G +K +
Sbjct: 344 KRVEDGMKLFREMSQRGLVS------------------NTVTYNTLIQGFFQAGDVDKAQ 385
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
+ + +M G PD ++Y++L+ C+ + +A ++E+M+ + ++ D+V Y T+I G
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ G++ A F + L G++ VT+ +++G C G + +Y M ++G
Sbjct: 446 CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Query: 388 STI 390
T+
Sbjct: 506 CTL 508
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 176/371 (47%), Gaps = 52/371 (14%)
Query: 143 LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
+ +VLV TY++ GS + T +V M+ GL+ CN L
Sbjct: 177 VLDVLVDTYKKNGS--------------------VRTAAQVVLMMGDLGLAPTRRCCNGL 216
Query: 203 IWEVSRG---------KGVISGYEIYREVF-----------GLDSDATAGIGKDVKRVVR 242
+ ++ R KG + G I +V+ D DA + ++++R
Sbjct: 217 LKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRR-D 275
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
N T+N ++ G R GA E+ EM G PD ++Y LM C+ R++EA+
Sbjct: 276 CAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAK 335
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM ++ +VV Y T++ GF + G+ A A + EM +GV+ + + +++L+ G
Sbjct: 336 ALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGL 395
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG---ELCDKRRVFEALDILKARVVKFGL 419
C+ G + A + N+M + G P+ T L+ + DK FE L+ ++ G+
Sbjct: 396 CKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMR----NSGI 451
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y +I GLC+ G+ +EA + EM+ +G +P+ +Y+ I G+ KEG++ +A
Sbjct: 452 LPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLAC- 510
Query: 480 LRKEMFENQVR 490
E EN +
Sbjct: 511 ---ESLENMTK 518
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 119/247 (48%), Gaps = 2/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN T+ L+ G+++ EKV + M G +PD + Y +++ M A
Sbjct: 591 LKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 650
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ E+ + D+ Y+++I G C++ +M +A EM G+E V + L++G+
Sbjct: 651 MVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGF 710
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR+GD+ A V++ + KG P T LI C + +A D+ K ++ G+ P
Sbjct: 711 CRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYK-DMLDRGIAPD 769
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y L G + +E+AL + EM +G+ + ++S + G+ K G ++ L
Sbjct: 770 AFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLLH 828
Query: 483 EMFENQV 489
M + ++
Sbjct: 829 VMMDREI 835
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 39/286 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN +T+ ++ G + G ++ ++ EM G +P+ + Y+ L+ +E + A
Sbjct: 451 ILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLAC 510
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ E M NV D+ YN++I G +G + AEE++ ++ G+ T+ L++GY
Sbjct: 511 ESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGY 570
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI----------------------GELCD- 399
C+ +++ A + M G +P T L+ G+ D
Sbjct: 571 CKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDN 630
Query: 400 -----------KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
+ E ++ V K GL P Y LI GLC+ ME+A+ + E
Sbjct: 631 HIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDE 690
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMA-----TMLRKEMFENQV 489
M +G EP + Y+A IDG+ + G++ A ++L K + N V
Sbjct: 691 MAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCV 736
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+PN ++ L+ G + G + + EM ++G PD ++Y LM + A
Sbjct: 381 VQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAF 440
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EMR+ + + Y +I G C+ GE A EM G++ ++ + L+ G+
Sbjct: 441 ELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH 500
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G + A +M + P+ LI L R+ EA + A+V K GL P
Sbjct: 501 SKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYY-AQVQKRGLVPD 559
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E +Y LI G C+ +E+A ++ +M+ G +P+ + Y+ ++GY K + E + + +
Sbjct: 560 EFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQ 619
Query: 483 EMF 485
M
Sbjct: 620 SML 622
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P + +NAL+ GF R G + +V+ + G P+C +Y+ L+ C+ + +A
Sbjct: 696 LEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAF 755
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+++M D+ + D YN + G + ++ +A EM G S+ F LV G+
Sbjct: 756 DLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSL-FSTLVRGF 814
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFEALDILKA---R 413
C+ G + + + M + P T+E +I G+LC+ RVF L KA
Sbjct: 815 CKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSS 874
Query: 414 VVKFGLFPTEKSYMFLIKGLCE 435
+F L T+ LI C+
Sbjct: 875 TDRFSLLFTDMINKGLIPPKCD 896
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 83/246 (33%), Gaps = 65/246 (26%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ +E V ++ + GL + NALI R + R VF DS G+
Sbjct: 678 MADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRA----RNVF--DSILAKGL 731
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV-- 291
PN T+ AL+ G + G D++ +M G PD + Y+VL
Sbjct: 732 ----------LPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCS 781
Query: 292 --------------------------------FCEERRMREAEKLWEEMRDKNVEHDVVA 319
FC+ R++E EKL M D+ + +
Sbjct: 782 DAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQT 841
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+I F + G++ A F E+ SS D L++ DM
Sbjct: 842 VENVITEFGKAGKLCEAHRVFAELQQKKASQSS---------------TDRFSLLFTDMI 886
Query: 380 RKGFEP 385
KG P
Sbjct: 887 NKGLIP 892
>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
barbata]
Length = 429
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 195/418 (46%), Gaps = 25/418 (5%)
Query: 91 FFSF--TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ + S +H+L SY T+IH L +++ A+ +I+V + +F +
Sbjct: 1 FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSAXAVFAAIX 60
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+T +VF LI LE + C + R L V TC ++ + +
Sbjct: 61 ETKGTQRXDIYVFSGLITTYLESGFLRDAIECYRLTR---EHKLRVPFDTCKKVLEHLMK 117
Query: 209 GK--GVISGYEIYREVFGLD--------------SDATAGIGKDVKRVVR---VRPNVHT 249
K ++ G+ G D I + V + +RP+V +
Sbjct: 118 LKYFKLVWGFXXXIXXXGXXXXXXFFNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVS 177
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N LM G+ R G + + M G +PD Y+YSVL+ C+E +M +A +L++EM
Sbjct: 178 YNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 237
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + + V + T+I G C+ G + A E +++M + +T+ L+ G C+ GD+
Sbjct: 238 VKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 297
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + ++M KG + + T LI C + + A + K R+++ + + +Y L
Sbjct: 298 QAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRK-RMIQENIRLDDVAYTAL 356
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
I GLC+EG+ +A K+ EM+ G +P Y+ I+ + K+G+V + L K+M N
Sbjct: 357 ISGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRN 414
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 113/209 (54%), Gaps = 1/209 (0%)
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
+++LM FC++ +R A+ +++ + + VV+YNT++ G+ +G++ M
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
SGV+ T+ L+NG C+ +D A ++++M KG P G T LI C RV
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVD 262
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
A++I K +++ L P +Y LI GLC++G +++A + EM KG + Y+
Sbjct: 263 LAMEIYK-QMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTL 321
Query: 465 IDGYMKEGNVEMATMLRKEMFENQVRQED 493
IDG KEG+++ A RK M + +R +D
Sbjct: 322 IDGCCKEGDLDAAFEHRKRMIQENIRLDD 350
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 94/190 (49%), Gaps = 1/190 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN TF L+ G + G + +++ +M PD +Y+ L+ C++ +++A
Sbjct: 241 LXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 300
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM K ++ D + Y T+I G C+ G++ A E + M + V + L++G
Sbjct: 301 DLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGL 360
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G A + +M G +P+ T ++I E C K V++ +LK + + G P+
Sbjct: 361 CQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLK-DMQRNGHAPS 419
Query: 423 EKSYMFLIKG 432
+Y L+ G
Sbjct: 420 VVTYNVLMNG 429
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 208/414 (50%), Gaps = 21/414 (5%)
Query: 53 RSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHL-ALRFFSFTQHKSLCKHSLSSYATI 111
R+K +N +LS+ S T T + + +NN L A FS H+ + L S++++
Sbjct: 273 RAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGV-SPDLISFSSL 331
Query: 112 IHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEV 171
I + SR + A R +++ P ++ +L+ Y G ++ LE+
Sbjct: 332 IGVSSRNGHLDQALMYFR-DMKTSGLVPDNVIYTILINGYCRNG--------MMSEALEI 382
Query: 172 KNIEKIETC-VDIVRM-LMSRGLSVK--VSTCNALIWEVSRGKGVISGYEIYRE-VFGLD 226
++ + C +D+V + GL K ++ NAL E+ +GV+ + + + G
Sbjct: 383 RDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVE-RGVVPDFCTFTTLIHGHC 441
Query: 227 SDATAGIGKDVKRVV---RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
+ G + ++ ++P++ T+N L+ GF + EK ++W EM P+
Sbjct: 442 KEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHI 501
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
SY++L+ +C + EA +LW+EM K ++ +V NT+I G+C G++++A+EF +M
Sbjct: 502 SYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKM 561
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
GV S+T+ L+NG+ + +D A + N M KG +P+ T V++ C + R+
Sbjct: 562 ISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRM 621
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
EA IL+ ++++ G+ P +Y LI G + ++EA + EM+ +GF P
Sbjct: 622 QEAELILR-KMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 187/410 (45%), Gaps = 70/410 (17%)
Query: 140 KLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC 199
++++ E L+ CG VFDLLI+ ++ + K+ D ++L +G V ++ C
Sbjct: 97 RVEIVESLISMSSTCGVDNLVFDLLIRSYVQAR---KLNEGTDTFKILRRKGFLVSINAC 153
Query: 200 NALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV-------------KRVVRVRP- 245
N+L+ + + V +E+Y E+ A +GI +V ++ V+P
Sbjct: 154 NSLLGGLVKMGWVDLAWEVYNEI------ARSGIELNVYTLNIMVNALCKDHKIDDVKPF 207
Query: 246 -----------NVHTFNALMVGFYREG----AFE-------------------------- 264
++ T+N L+ + REG AFE
Sbjct: 208 LIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCK 267
Query: 265 -----KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
+ + V+ EM +G PD +Y+ L+ C EA+ ++ +M + V D+++
Sbjct: 268 KGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLIS 327
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
++++IG G + +A +FR+M SG+ +V + L+NGYCR G + A+ + + M
Sbjct: 328 FSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKML 387
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+G + ++ LC K+ + +A + L +V+ G+ P ++ LI G C+EG M
Sbjct: 388 EQGCALDVVAYNTILNGLCKKKLLADA-NALFDEMVERGVVPDFCTFTTLIHGHCKEGNM 446
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+AL + M K +P + Y+ IDG+ K +E A L EM ++
Sbjct: 447 GKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKI 496
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 191/412 (46%), Gaps = 29/412 (7%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+H+L SY T+IH L +++ A+ +I+V + +F +++T S +VF
Sbjct: 2 RHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYVF 61
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
LI LE C + R L V TC ++ + + K + Y E
Sbjct: 62 SGLITAYLESGFXRDAIECYRLTR---EHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEE 118
Query: 222 VFGLD----------------SDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGA 262
+ D + + V + +RP+V ++N LM G+ R G
Sbjct: 119 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 178
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
++ + M G +PD Y+YSVL+ C+E +M +A +L++EM K + + V + T
Sbjct: 179 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 238
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G C+ G + A E ++ M + +T+ L+ G C+ GD+ A + ++M KG
Sbjct: 239 LIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 298
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+P+ T LI C + + A + K R+++ + + +Y LI GLC+EG+ +A
Sbjct: 299 LKPDKFTYTTLIDGCCKEGDLDTAFEHRK-RMIQENIRLDDVAYTALISGLCQEGRSVDA 357
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
K+ EM+ +P Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 358 EKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM------QRDG 403
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++ D+ EM+ G +PD ++Y+ L+ C+E + A +
Sbjct: 266 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEH 325
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C+ G AE+ REM ++ + T+ ++N +C+
Sbjct: 326 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCK 385
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 386 KGDVWKGSKLLKEMQRDGHAPSVVTYNVLM 415
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ L + T N LI+ + + + +++ +D + G+
Sbjct: 248 RVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDL------IDEMSMKGL-- 299
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 300 --------KPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL----DDVAYTALISG 347
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM +++ D Y II FC+ G++ + + +EM G S
Sbjct: 348 LCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPS 407
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 408 VVTYNVLMNG 417
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 200/460 (43%), Gaps = 70/460 (15%)
Query: 58 WNHLLS-LCRSGL----------------TPTQFSQIAL--GL--KNNPHLALRFFSFTQ 96
+N LLS LCR+GL P +FS L GL +AL+ F
Sbjct: 115 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 174
Query: 97 HKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGS 156
+ C + +Y+T+I L + + D KLFE + + E
Sbjct: 175 NGD-CPPDVVAYSTLIAGLCKTGRL----------------DEACKLFEKMRENSCEPDV 217
Query: 157 APF--VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVIS 214
F + D L K ++++ ++ + R + V T ++LI + + V
Sbjct: 218 VTFTALMDGLCK-------GDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRD 270
Query: 215 GYEIYREVFGLDSDATAGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
E+++ + +VR + PNV T+N+L+ GF + + EM
Sbjct: 271 AQEVFK-----------------RMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 313
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
GC PD +Y+ L+ C+ R EA +L+ +M+ K DV+ Y+ +IGGFC++ +
Sbjct: 314 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERI 373
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
A F +M V VTF LV GYC AG VD A + +M P+ T L
Sbjct: 374 DMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL 433
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ C R+ EA +LK R+ K G P +Y LI C GK A K+ EMVG G
Sbjct: 434 VDGFCKVGRMVEARRVLK-RMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNG 492
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+P++ Y + I G+ G++E A ++M E R E+
Sbjct: 493 VQPNVITYRSLIGGFCGTGDLEEA----RKMLERLERDEN 528
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 177/361 (49%), Gaps = 27/361 (7%)
Query: 146 VLVKTYRECGSAPFVFD---LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
+L+K +E G AP V ++ C + K ++T + R ++ G + T N L
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTK----VDTAYKLFRQMVENGCMPNLVTYNTL 118
Query: 203 IWEVSRGKGVISGYEIYREVF--GLDSDA------TAGIGKDVKRVVRVR---------- 244
+ + R + YE+ E+ GL D AG+ K K + ++
Sbjct: 119 LSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDC 178
Query: 245 -PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
P+V ++ L+ G + G ++ ++ +M CEPD +++ LM C+ R++EA++
Sbjct: 179 PPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 238
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ E M D+N +V+ Y+++I G C+ G++ A+E F+ M + G+E + VT+ L++G+C
Sbjct: 239 VLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 298
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
VDSA+L+ +M G P+ T LI LC R EA + KF P
Sbjct: 299 MTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF-CNPDV 357
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI G C+ +++ A + +M+ + P + +S ++GY G V+ A L +E
Sbjct: 358 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 417
Query: 484 M 484
M
Sbjct: 418 M 418
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 131/248 (52%), Gaps = 3/248 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V TF+ L+ G+ G + E + EM C PD Y+Y+ L+ FC+ RM EA
Sbjct: 388 VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEAR 447
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ + M + + +VV Y +I FC G+ A + EM +GV+ + +T+ L+ G+
Sbjct: 448 RVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGF 507
Query: 363 CRAGDVDSAILVYNDMCR-KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C GD++ A + + R + + + V++ LC R+ AL++L+A + + G P
Sbjct: 508 CGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEA-IKQSGTPP 566
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEM-VGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
Y+ LI+GLC+ ++ +A++V EM + + P+ E Y A I +EG E A L
Sbjct: 567 RHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANAL 626
Query: 481 RKEMFENQ 488
E+ N+
Sbjct: 627 ADELLGNK 634
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 118/241 (48%), Gaps = 1/241 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N L+ GF + + + EM G P+ +YS ++ FC + ++ A KL
Sbjct: 40 PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKL 99
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M + ++V YNT++ G C G M A E EM G++ +++ L+ G C+
Sbjct: 100 FRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 159
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +D A+ V+ D P+ LI LC R+ EA + + ++ + P
Sbjct: 160 TGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFE-KMRENSCEPDVV 218
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ L+ GLC+ +++EA +V M + P++ YS+ IDG K G V A + K M
Sbjct: 219 TFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM 278
Query: 485 F 485
Sbjct: 279 I 279
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 127/239 (53%), Gaps = 1/239 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV T+ ++ G + + + +M + G P+ ++Y+VL+ FC+ ++ A L
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM++ + +VV Y+T+I GFC ++ A + FR+M +G + VT+ L++G CR
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G +D A + ++M +G +P+ + + L+ LC ++ AL + + P +
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDN-SNGDCPPDVVA 184
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI GLC+ G+++EA K+ +M EP + ++A +DG K ++ A + + M
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
CE + ++++++ C+ R+ EA + +M+ K + YN +I GFC++ ++ RA
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+EM SG+ + VT+ +++G+CR VD+A ++ M G P T L+ L
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122
Query: 398 CDK---RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
C +E LD ++ R GL P + SY L+ GLC+ GK++ ALKV +
Sbjct: 123 CRNGLMDEAYELLDEMRER----GLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDC 178
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
P + YS I G K G ++ A L ++M EN
Sbjct: 179 PPDVVAYSTLIAGLCKTGRLDEACKLFEKMREN 211
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 116/230 (50%), Gaps = 7/230 (3%)
Query: 230 TAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
AG+ D +R++ P+V+T+ +L+ GF + G + V MA+ GC+P+
Sbjct: 404 NAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVV 463
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+Y+ L+ FC + A KL EEM V+ +V+ Y ++IGGFC G++ A + +
Sbjct: 464 TYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERL 523
Query: 344 GLS-GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
++ + +++G CR G + +A+ + + + G P LI LC +
Sbjct: 524 ERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKE 583
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
+ +A+++L+ + P ++Y +I+ L EG+ EEA + E++G
Sbjct: 584 LGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLGN 633
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
E + +T+ +++G C+A + A + M +KG P T VLI C +V A
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+LK + + GL P +Y +I G C + K++ A K+ +MV G P+L Y+ + G
Sbjct: 64 LLK-EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122
Query: 469 MKEGNVEMATMLRKEMFENQVRQE 492
+ G ++ A L EM E ++ +
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPD 146
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 132/242 (54%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN++T+N L+ + R G FE+ ++ EM G + SY+ L+A C ++ +A
Sbjct: 104 VEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAA 163
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL + MR + ++ +N ++ G+ + G+M+ A FF +M +G + S+VT+ L+ G+
Sbjct: 164 KLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGF 223
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRA D+ A +DM +G EP T +LI + + +A +IL A + K GL
Sbjct: 224 CRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEIL-AGMEKAGLEVD 282
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L++ LC EG M++A K+ M KG EPS IY I GY +EG+ A L
Sbjct: 283 AHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIM 342
Query: 483 EM 484
EM
Sbjct: 343 EM 344
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ R RP++ TFN L+ G+ + G + +M G +P +Y++L+A FC
Sbjct: 167 DMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRA 226
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R M A + +M+++ +E V Y +I F M +A E M +G+E + T+
Sbjct: 227 RDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTY 286
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
LV C G++ A ++ M KG EP +++I + ++AL ++
Sbjct: 287 GVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQ 346
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
K GL P SY I+ LC++ K +EA + +M
Sbjct: 347 K-GLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 176/393 (44%), Gaps = 20/393 (5%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+H+L SY T+IH L +++ A+ +I+V + +F +++T S +VF
Sbjct: 8 RHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVF 67
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
LI LE + C + R V + TC ++ + + K + Y+E
Sbjct: 68 SGLITAYLESGFLRDAIECYRLTR---EHKFWVPLDTCRKVLEHLMKLKYFKLVWGFYKE 124
Query: 222 VFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
+ A+ ++ FN LM F +EG + V + + G P
Sbjct: 125 ILECGYPAS----------------LYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPS 168
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
S++ L+ + + E +L M V+ DV Y+ +I G C+ +M A E F
Sbjct: 169 VVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFD 228
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM G+ + VTF L++G+C+ G VD A+ +Y M + P+ T LI LC K
Sbjct: 229 EMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 288
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ +A D++ ++ GL P + +Y LI G C+EG ME A + Q M+ + +Y
Sbjct: 289 ELKQAHDLIDEMSME-GLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVY 347
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+A I G +EG A + +EM ++ G
Sbjct: 348 TALISGLCQEGRSVDAEKMLREMLSVGLKPNTG 380
>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
origanoides]
Length = 431
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 196/425 (46%), Gaps = 31/425 (7%)
Query: 91 FFSF--TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ + S +H+L SY T+IH L ++ A+ +I+V + +F ++
Sbjct: 3 FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASXVFAAIL 62
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+T S +VF LI LE + C + R L V TC ++ + +
Sbjct: 63 ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTR---EHKLWVPFDTCRKVLEYLMK 119
Query: 209 GKGVISGYEIYREVFGLD----------------SDATAGIGKDVKRVVR---VRPNVHT 249
K + Y E+ D + + V + +RP+V +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
N LM G+ R G ++ + M G +PD Y+YSVL+ C+E +M +A + ++EM
Sbjct: 180 XNTLMNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEML 239
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + + V + T+I G C+ G + A+E +++M + +T+ L+ G C+ GD+
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + +DM KG +P+ T LI C + + A + K R+++ + + Y L
Sbjct: 300 QAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRK-RMIQENIRLDDVVYTAL 358
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I GLC+EG+ +A K+ EM+ +P Y+ I+ + K+G+V + L KEM
Sbjct: 359 ISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM----- 413
Query: 490 RQEDG 494
Q DG
Sbjct: 414 -QRDG 417
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 188/407 (46%), Gaps = 29/407 (7%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
SY T+IH L +++ A+ +I+V + +F +V+T S +VF LI
Sbjct: 2 SYCTMIHFLCTQQMLSEAKSLIQVVVSRKGKGSASAVFAAIVETKGTQRSDLYVFSGLIT 61
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
LE + C + R V TC ++ + + K + Y E+
Sbjct: 62 AYLESGFLRDAIECYRLTR---EHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 118
Query: 227 ----------------SDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFEKVE 267
D + + V + +RP+V ++N LM G+ R G ++
Sbjct: 119 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 178
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
+ M G +PD Y+YSVL+ C+E +M +A +L++EM K + + V + T+I G
Sbjct: 179 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 238
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M K +P+
Sbjct: 239 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDK 298
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI C + + A + K R+++ + E +Y LI GLC+EG+ +A K+
Sbjct: 299 ITYTTLIDGCCKEGDLDSAFEHRK-RMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLR 357
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
EM+ G +P Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 358 EMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEM------QRDG 398
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ + EM+ +PD +Y+ L+ C+E + A
Sbjct: 259 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAF 318
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ S T+ ++N +
Sbjct: 319 EHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEF 378
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ GDV + +M R G P T VL+
Sbjct: 379 CKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 410
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 92/190 (48%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + + + E+
Sbjct: 243 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM------------- 289
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+ ++P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 290 ---SMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRL----DEVAYTALISG 342
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM + ++ D Y II FC+ G++ + + +EM G S
Sbjct: 343 LCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 402
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 403 VVTYNVLMNG 412
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 212/473 (44%), Gaps = 50/473 (10%)
Query: 35 SDQSHNLIATVVSLLTHHRSKSRWNHLL--SLCRSGLTPTQFSQIALGLKNNPHLALRFF 92
S +++ +A +V+ +T R K RW L F + + +NN L+LRFF
Sbjct: 54 SRRNYTEMAKIVATIT--REKPRWEQTLVSDFPSFNFADPLFFRELVATQNNVLLSLRFF 111
Query: 93 SFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYR 152
+ C S + L A+ + A+ V +A P++
Sbjct: 112 QWLCTNHDCTPDPISSNMLFEALLDAKAVRAAKMVRDIAGFIPDSAS------------- 158
Query: 153 ECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
+ +KC V IE+ +++ L G+ + + CN+++ +
Sbjct: 159 --------LEQYVKCLCGVGFIEE---AIEVYFQLKEAGIRISIVACNSILSGCLKAGKT 207
Query: 213 ISGYEIYREVF--GLDSDA-TAGIGK------DVKRVVR------------VRPNVHTFN 251
+E Y+E+ G SDA T +G D +V R + P T+N
Sbjct: 208 ELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYN 267
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
L+ GF + + + +V M P Y+Y ++ C+ EA +++ +++D+
Sbjct: 268 KLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDR 327
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
D V Y T+I G CE+G A + + EM G++ ++ T+ +++G ++GD + A
Sbjct: 328 GYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERA 387
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
+YN+MC KG+ T +I ELC + + EA ++ K ++ + G+ +Y LI+
Sbjct: 388 CELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFK-KMSETGIQADAITYNSLIR 446
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G C+EGK++E + + E+V + +PS+ +Y I K+G+ E A L +M
Sbjct: 447 GFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDM 499
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 208/478 (43%), Gaps = 54/478 (11%)
Query: 21 QLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGL-TPTQFSQIAL 79
+LL+QF + P + + LIA ++ S S H + + R+ L T + +I
Sbjct: 249 ELLNQFLKTGLDPGNPTYNKLIAGFCQA-KNYASMSEVLHTM-IARNHLPTIYTYQEIIN 306
Query: 80 GLKNNPHL--ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN 137
GL N A R F+ + + + Y T+IH L G AR +
Sbjct: 307 GLCKNEECLEAYRVFNDLKDRGYAPDRVM-YTTMIHGLCEMGSFGEARKL---------- 355
Query: 138 DPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
FE++ K G P + ++ ++ L+ + E+ ++ + ++G
Sbjct: 356 -----WFEMMDK-----GMQPNAYTYNTMLHGSLKSGDFER---ACELYNEMCNKGYGTT 402
Query: 196 VSTCNALIWEV-SRGKGVISGYEIYREV--FGLDSDATAGIGKDVKRVVRVRPNVHTFNA 252
TCN +I E+ SRGK +E+++++ G+ +DA T+N+
Sbjct: 403 TVTCNKIISELCSRGKSD-EAFEVFKKMSETGIQADAI------------------TYNS 443
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L+ GF +EG ++ ++ E+ +P Y +L+ C++ A++L +M K
Sbjct: 444 LIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKG 503
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ + Y+T++ G + G+ E + E G +++ T +++ C G D A
Sbjct: 504 LHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEAS 563
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
++ M G + + T LI C + +V +++++L V + GL P+ SY LI
Sbjct: 564 EMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQ-GLQPSASSYASLIIQ 622
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
LC+ G E A ++ +MV KG EP + I G K+G M EN+++
Sbjct: 623 LCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIK 680
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 117/248 (47%), Gaps = 1/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + ++ G G+F + +W EM G +P+ Y+Y+ ++ + A +L
Sbjct: 331 PDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACEL 390
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM +K V N II C G+ A E F++M +G+++ ++T+ L+ G+C+
Sbjct: 391 YNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCK 450
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G VD + + N++ + +P S E+LI + C K FEA L + GL P
Sbjct: 451 EGKVDERMNLLNELVAQDPQPSVSLYELLIIKSC-KDGDFEAAKRLLGDMSSKGLHPNAY 509
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y ++ G + G E ++ E KG+ + + I G + A+ + K+M
Sbjct: 510 TYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKM 569
Query: 485 FENQVRQE 492
E ++ +
Sbjct: 570 SETGIKAD 577
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 159 FVFDLLIKCCLEVKNIEKI-----ETCVDIVRMLMSRGLSVKVSTCNALIWEV-SRGKGV 212
+ +D ++ L+ + E + ETC ++G +TCN +I E+ SRGK
Sbjct: 509 YTYDTMLHGSLKSGDFEHVRELYNETC--------NKGYGTTTATCNKIISELCSRGK-- 558
Query: 213 ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
SD + + K + ++ + T+N+L+ GF +EG K ++ E
Sbjct: 559 --------------SDEASEMFKKMSET-GIKADAITYNSLIRGFCKEGKVGKSMNLLNE 603
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
+ G +P SY+ L+ C+ A++LW +M K +E +I G C+ G
Sbjct: 604 LVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGR 663
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLV 359
+ M + ++ FE L
Sbjct: 664 ATEGMDRLMGMLENKIKPKKAAFEDLA 690
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 136/249 (54%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P T+N ++ GF +EG+ V+ EM ++G P+ ++Y+ L+ FC+ M A K+
Sbjct: 571 PTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKV 630
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EM++K +E DV Y +I GFC G+M A + E+ G+ + V + +++G+ +
Sbjct: 631 MDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRK 690
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
++++A+ ++ M +G + LI L + ++ A + L A ++ G+ P
Sbjct: 691 LQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASE-LYAEMLAKGIMPDLI 749
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI GLC +G++E A K+ +M K P++ IY+ I G+ KEGN++ A L EM
Sbjct: 750 TYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEM 809
Query: 485 FENQVRQED 493
+ + +D
Sbjct: 810 LDKGLVPDD 818
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 209/461 (45%), Gaps = 57/461 (12%)
Query: 67 SGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRA-RLIGPAR 125
S LT TQ+ L +N+P AL +F++ K S+ + ++HIL+++ G AR
Sbjct: 60 SFLTQTQYIDTLLNHQNDPQSALSYFTWASQKRGLIKSVDALCVLLHILTKSTETCGKAR 119
Query: 126 DVI-RVALRSPENDPKLKLFEVLVKTYR-ECGSAPFVFDLLIKCCLEVKNIEKIETCVDI 183
+++ R A P + + ++ + R + S VF+ L+ ++ K +I VD
Sbjct: 120 NLLNRFASDDWGPVPSVVVARLIESSRRLDFESDSRVFNYLLNSYVKTK---RINDAVDC 176
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRV 243
L+ + + ++ N + E+ + + ++Y ++ A+ G+ D
Sbjct: 177 FNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKM------ASKGVKGDCA----- 225
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
T + ++ REG E+ E + E G E D +YS+++ C++ A
Sbjct: 226 -----TISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALG 280
Query: 304 LWEEMRDKN-VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EMRDK V H+V+ + +IG + G+M A + EM G + V L+ GY
Sbjct: 281 LLREMRDKGWVPHEVI-FTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGY 339
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGL 419
C+ GD+DSA+ +++ M G P T V+I C + + +E + +K + + +
Sbjct: 340 CKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTV 399
Query: 420 F--------------PTEKSYMF----------------LIKGLCEEGKMEEALKVQAEM 449
F P E S +F L+ LC+EGKM EA + +M
Sbjct: 400 FNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKM 459
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
V KG PS+ Y+ I G+ ++G+++ A + EM E ++
Sbjct: 460 VRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLK 500
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 178/370 (48%), Gaps = 30/370 (8%)
Query: 138 DPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
D L+LF+ + E G P + ++I+ C + N++K +I + ++ +S
Sbjct: 346 DSALELFDKM----NENGICPNNVTYAVIIEWCCKNGNMDK---AYEIYNQMKNKDISPT 398
Query: 196 VSTCNALIWEVSRGKGVISGYEIYRE--------VFGLDSDATAGIGKDVK--------- 238
V N+LI + + +++ E VF +S + + K+ K
Sbjct: 399 VFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNS-LLSWLCKEGKMSEACSIWE 457
Query: 239 RVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
++VR VRP+V ++N +++G ++G + V+VEM G +P+ +YSVLM + ++
Sbjct: 458 KMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKG 517
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
A L++ MR +N+ N II G C+ G + +++ +++ G + +T+
Sbjct: 518 DTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYN 577
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
+++G+ + G V+SA+ VY +MC+ G P T LI C + AL ++ K
Sbjct: 578 CIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNK 637
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G+ Y LI G C +G M A ++ +E+ G P+ +YS+ I G+ K N+E
Sbjct: 638 -GIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEA 696
Query: 477 ATMLRKEMFE 486
A L K M
Sbjct: 697 ALHLHKRMIN 706
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 115/234 (49%), Gaps = 1/234 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ V PNV T+ L+ GF + + V EM G E D Y L+ FC + M
Sbjct: 602 IGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVN 661
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +L E+++ + + V Y+++I GF ++ M A + M G+ + L++
Sbjct: 662 ASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLIS 721
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G + G + A +Y +M KG P+ T VLI LC+K ++ A IL+ K +
Sbjct: 722 GLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKC-MT 780
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
PT Y LI G +EG ++EA ++ EM+ KG P Y ++G +K+GN+
Sbjct: 781 PTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ + L+ G +EG +++ EM G PD +YSVL+ C + ++ A+K+
Sbjct: 712 DLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKIL 771
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E+M K + V YNT+I G + G + A EM G+ T++ LVNG +
Sbjct: 772 EDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKD 831
Query: 366 GDVDSA 371
G++ S
Sbjct: 832 GNLFSG 837
>gi|307136214|gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 653
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 224/487 (45%), Gaps = 57/487 (11%)
Query: 55 KSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHI 114
+ RW L + S LT + ++ +N+P LAL F+++ + + HSL S T++H+
Sbjct: 43 QRRWKFLEQVSPS-LTNSLVCRVVREFRNSPQLALEFYNWVEARDNFSHSLESCCTLVHV 101
Query: 115 LSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNI 174
L +R A ++ + P L++ L+ +Y C S P VFD L++ C ++K++
Sbjct: 102 LVNSRNFNDALSIMESLMLKNGKSP-LEVLGGLMNSYEICNSNPAVFDALVRTCTQLKSV 160
Query: 175 EKIETCVDIVRM--------------------------------LMSRGLSVKVSTCNAL 202
E + +R+ +++ G S V+T N +
Sbjct: 161 EGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFWNMYMEMVASGYSENVNTFNLI 220
Query: 203 IWEVSRGKGVISG---------YEIYREV--FGLDSDATAGIGK-----------DVKRV 240
I+ + + ++ EI+ V F + D + +G+ +V
Sbjct: 221 IYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDKASKMGEMDLALKLTRNTEVISG 280
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V PN+ T+N ++ GF + E ++V EM +LG + + +Y+ L+ + + +
Sbjct: 281 GSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNERTYAPLIDGYARKGSLDV 340
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +L +EM + + D V YN++I GE+ A +M + T+ L
Sbjct: 341 AFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRILPDEFTYSILTK 400
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C +G ++ A+ V+ + + + T +LI + R + A +L + +V+ G+
Sbjct: 401 GLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLSSMIVR-GIK 459
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y L+ G C+EGK+E A+++ + V + +L +Y++ +DG K+G+++ A +L
Sbjct: 460 PDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIDAARLL 519
Query: 481 RKEMFEN 487
++ +N
Sbjct: 520 VDKLQQN 526
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 111/229 (48%), Gaps = 2/229 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ P+ T++ L G G K V + D Y++++L+ + R + A
Sbjct: 387 RILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGA 446
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++L M + ++ D+V Y T++ G C+ G++ A + + + + +S+ V + +++G
Sbjct: 447 KQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDG 506
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G +D+A L+ + + + GF + T L+ C V +A + ++ G
Sbjct: 507 LCKQGSIDAARLLVDKLQQNGF-LDSVTYNTLLHGFCVNGEVEKAFALF-LEMINVGSLV 564
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
SY +I LC+ G +++A+++ M +G P L Y+ I ++K
Sbjct: 565 NIVSYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFVK 613
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 118/243 (48%), Gaps = 2/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ P+ +N+L+ Y EG E+ + +M PD ++YS+L C + +A
Sbjct: 352 RLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKA 411
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++ + ++N+ D +N +I + +A A++ M + G++ VT+ LV G
Sbjct: 412 LRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAG 471
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C+ G +++A+ +Y+ + + ++ LC K+ +A +L ++ + G F
Sbjct: 472 HCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLC-KQGSIDAARLLVDKLQQNG-FL 529
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y L+ G C G++E+A + EM+ G ++ Y+ I+ K G ++ A L
Sbjct: 530 DSVTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELM 589
Query: 482 KEM 484
+ M
Sbjct: 590 RAM 592
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+ N+ +N+++ G ++G+ + + V+ + D +Y+ L+ FC + +A
Sbjct: 494 KSNLVVYNSILDGLCKQGSIDAAR-LLVDKLQQNGFLDSVTYNTLLHGFCVNGEVEKAFA 552
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+ EM + ++V+YN +I C++G + +A E R M G+ +T+ L+ +
Sbjct: 553 LFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFV 612
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
++ D+ I +++ M KG P+ T + L+
Sbjct: 613 KSYGSDNVIELHDYMVLKGAVPDRQTYQSLV 643
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 2/161 (1%)
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
GE + + EM SG + TF ++ C+ + AI V M + P +
Sbjct: 193 GETDKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSF 252
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFG--LFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
++I + + AL + + V G + P +Y +I G C+ ++E A V AE
Sbjct: 253 NMIIDKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAE 312
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
M+ G + + Y+ IDGY ++G++++A L EM E ++
Sbjct: 313 MIKLGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRL 353
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N L+ GF G EK +++EM +G + SY++++ C+ +++A +L M
Sbjct: 533 TYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAM 592
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ + D++ Y T+I F + E M L G T++ LV+
Sbjct: 593 ASQGIVPDLITYTTLITNFVKSYGSDNVIELHDYMVLKGAVPDRQTYQSLVS 644
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 178/373 (47%), Gaps = 45/373 (12%)
Query: 107 SYATIIHILSRARLIGPARDVIRV--ALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLL 164
+Y ++H LS+AR + RD ++V + S + P V+V++
Sbjct: 41 TYTKLVHGLSKARRL---RDAVQVLQEMVSARHVPDNTTLTVVVQSL------------- 84
Query: 165 IKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG 224
CL ++++ ++V ++ RG++ T +AL+ G+ + V
Sbjct: 85 ---CLG----DRVDDARELVEEMLHRGMAANAITYSALV------DGLCKCERLDEAVAL 131
Query: 225 LDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+++ A G P V T+N+++ GF R ++ +M GC PD +
Sbjct: 132 VETMAERGCA----------PTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+ L+ FC+ R + +L E+ + D+V Y+T+I G C+ G + A + F EM
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS 241
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
+ +++T+ L+ GYCRAGD+D AI + M P+ T L+ C R+
Sbjct: 242 CA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLD 298
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+A ++ + ++V L P ++ L+ GLC EG+ME+AL++ E+ +G P++ Y+
Sbjct: 299 DAYELFQ-QMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCV 357
Query: 465 IDGYMKEGNVEMA 477
+DGY K V A
Sbjct: 358 VDGYCKANQVRKA 370
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 165/359 (45%), Gaps = 22/359 (6%)
Query: 147 LVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
LV+T E G AP V ++ +I + +++ + +++ G + T ALI
Sbjct: 131 LVETMAERGCAPTVVTYNSIITGFCRARRVDEAH---GFMEQMVAEGCHPDIITYTALIG 187
Query: 205 EVSRGKGVISGYEIYREV----FGLD----SDATAGIGK--------DVKRVVRVRPNVH 248
+ + V G E+ EV F D S G+ K D+ + P
Sbjct: 188 GFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAI 247
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N+L+ G+ R G ++ + +M C PD +Y+ LM+ FC+ R+ +A +L+++M
Sbjct: 248 TYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQM 307
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ DVV + +++ G C G M A E E+ G + T+ +V+GYC+A V
Sbjct: 308 VANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQV 367
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS-YM 427
A + D +GF P T +L+ C R +AL L + G PT + Y
Sbjct: 368 RKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYA 427
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
++ LC +G+ ++A++ EM+ +G+ P+ ++ + K + A L +EM +
Sbjct: 428 IILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIK 486
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 118/239 (49%), Gaps = 8/239 (3%)
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
+L +G + A E VE EM G + +YS L+ C+ R+ EA L E M +
Sbjct: 82 QSLCLGDRVDDARELVE----EMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAE 137
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
+ VV YN+II GFC + A F +M G +T+ L+ G+C++ DV
Sbjct: 138 RGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGR 197
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
+ + ++ R+GF P+ T +I LC R+ +A+DI + + PT +Y LI
Sbjct: 198 GLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE----EMSCAPTAITYNSLI 253
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G C G M+EA+++ +MV P + Y+ + + K G ++ A L ++M N++
Sbjct: 254 GGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKL 312
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 114/244 (46%), Gaps = 4/244 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+ L+ G + V EM PD + +V++ C R+ +A +L
Sbjct: 37 PDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAREL 96
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EEM + + + + Y+ ++ G C+ + A M G + VT+ ++ G+CR
Sbjct: 97 VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCR 156
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A VD A M +G P+ T LIG C R V L++L V + G P
Sbjct: 157 ARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELL-GEVTRRGFTPDIV 215
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I GLC+ G++ +A+ + EM P+ Y++ I GY + G+++ A L +M
Sbjct: 216 TYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKM 272
Query: 485 FENQ 488
+++
Sbjct: 273 VDDK 276
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 37/240 (15%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG------------- 326
P ++V++ C R+R A ++ +M D + D + Y ++ G
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQV 61
Query: 327 ----------------------FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
C + A E EM G+ ++++T+ LV+G C+
Sbjct: 62 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+D A+ + M +G P T +I C RRV EA ++ ++V G P
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFME-QMVAEGCHPDII 180
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C+ + L++ E+ +GF P + YS IDG K G + A + +EM
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 37/194 (19%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V TF +L+ G EG E ++ E+ R GC P Y+Y+ ++ +C+ ++R+A
Sbjct: 311 KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKA 370
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA------------------------- 336
E+L + R + + V YN ++ G C G +A
Sbjct: 371 EELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIIL 430
Query: 337 ------------EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
+F+ EM G ++ TF +V C+A A + +M + G
Sbjct: 431 DALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHT 490
Query: 385 PEGSTIEVLIGELC 398
P T + ++ C
Sbjct: 491 PGPGTCDAVVSAYC 504
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG--CEPDCYSYSVLMAVFCEERRMREAE 302
PN T+N L+ G R G ++ ++ G C Y++++ C + R +A
Sbjct: 384 PNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAV 443
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +EEM + + T++ C+ + +A E EM G T + +V+ Y
Sbjct: 444 QFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAY 503
Query: 363 CRAGDVDSA 371
CRAG + A
Sbjct: 504 CRAGMIQKA 512
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 145/268 (54%), Gaps = 9/268 (3%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + +++ ++ PN+ TFNAL+ F +EG F + E ++ +M + +PD
Sbjct: 308 YGRWSDASQLLSDMIEK--KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
++Y+ L+ FC R+ +A++++E M K+ DVV YNT+I GFC+ + E FRE
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK-- 400
M G+ +VT+ L+ G GD D+A V+ M G P+ T +L+ LC+
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 401 -RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+ E D ++ +K ++ Y +I+G+C+ GK+++ + + KG +P++
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYI----YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFEN 487
Y+ I G + ++ A L K+M E+
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKED 569
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 2/262 (0%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
D +G+ ++R+ + ++T+N L+ F R + +M +LG EP + S
Sbjct: 102 DVVISLGEKMQRL-EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 160
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ +C +R+ +A L ++M + D + + T+I G + + A M G
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ + VT+ +VNG C+ GD D A+ + N M E + +I LC R V +AL
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++ K K G+ P +Y LI LC G+ +A ++ ++M+ K P+L ++A ID
Sbjct: 281 NLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339
Query: 468 YMKEGNVEMATMLRKEMFENQV 489
++KEG A L +M + +
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSI 361
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 1/251 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ +V FN ++ + + +++ EM G P+ +YS L++ C R +A
Sbjct: 255 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 314
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L +M +K + ++V +N +I F + G+ AE+ + +M ++ T+ LVNG
Sbjct: 315 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 374
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C +D A ++ M K P+ T LI C +RV + ++ + + GL
Sbjct: 375 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR-EMSHRGLVG 433
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI+GL +G + A KV +MV G P + YS +DG G +E A +
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493
Query: 482 KEMFENQVRQE 492
M +++++ +
Sbjct: 494 DYMQKSEIKLD 504
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 155/351 (44%), Gaps = 27/351 (7%)
Query: 140 KLKLFEVLV----KTYR-ECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLS 193
K+K F+V++ K R E + +++LI C C +I + ++ +M G
Sbjct: 97 KMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRR----SQISLALALLGKMMKLGYE 152
Query: 194 VKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNAL 253
+ T ++L+ GK + SDA A + + V+ + RP+ TF L
Sbjct: 153 PSIVTLSSLLNGYCHGKRI--------------SDAVALVDQMVE--MGYRPDTITFTTL 196
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ G + + + M + GC+P+ +Y V++ C+ A L +M +
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI 256
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
E DVV +NTII C+ + A F+EM G+ + VT+ L++ C G A
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ +DM K P T LI + + EA + L ++K + P +Y L+ G
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA-EKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
C ++++A ++ MV K P + Y+ I G+ K VE T L +EM
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 137/306 (44%), Gaps = 31/306 (10%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
KL++ ++K R F ++ L+ C+ ++++ + ++S+ V T N
Sbjct: 351 KLYDDMIK--RSIDPDIFTYNSLVNGFCMH----DRLDKAKQMFEFMVSKDCFPDVVTYN 404
Query: 201 ALIWEVSRGKGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
LI + K V G E++RE+ GL D T+ L+ G +
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTV------------------TYTTLIQGLF 446
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+G + + V+ +M G PD +YS+L+ C ++ +A ++++ M+ ++ D+
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
Y T+I G C+ G++ + F + L GV+ + VT+ +++G C + A + M
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Query: 379 CRKGFEPEGSTIEVLI-GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
G P T LI L D + A I + R + F + S + L+ + +G
Sbjct: 567 KEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR---FVGDASTIGLVANMLHDG 623
Query: 438 KMEEAL 443
+++++
Sbjct: 624 RLDKSF 629
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 155/311 (49%), Gaps = 17/311 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+I+ V+I+ ++SR T N LI + + V + E+ R + + G
Sbjct: 352 EIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVL------TSKG--- 402
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
V P+V TFN+L+ G E +++ EM GC+PD ++YS+L+ C E
Sbjct: 403 -------VLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSE 455
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
RR++EA L +EM +VV YNT+I G C+ + AE+ F +M + GV SSVT+
Sbjct: 456 RRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTY 515
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+NG C++ V+ A + + M +G +P+ T ++ C + + A DI++ +
Sbjct: 516 NTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTL 575
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G P +Y LI GLC+ G+++ A K+ + KG + + Y+ I K +
Sbjct: 576 N-GCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTK 634
Query: 476 MATMLRKEMFE 486
A L +EM E
Sbjct: 635 EAMRLFREMME 645
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 159/346 (45%), Gaps = 39/346 (11%)
Query: 152 RECGSAPFVFDLLI-KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
R+C ++ LI C E +E ++ R+L S+G+ V T N+LI +G
Sbjct: 366 RDCEPNTVTYNTLIGTLCKE----NHVEAATELARVLTSKGVLPDVCTFNSLI----QGL 417
Query: 211 GVISGYEIYREVF------GLDSDA-TAGI-------GKDVKRVVRVRP---------NV 247
+ S EI E+F G D D T I + +K + + NV
Sbjct: 418 CLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNV 477
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
+N L+ G + ED++ +M LG +Y+ L+ C+ +R+ EA +L ++
Sbjct: 478 VVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQ 537
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M + ++ D Y T++ FC+ G++ RA + + M L+G E VT+ L+ G C+AG
Sbjct: 538 MIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGR 597
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
VD A + + KG +I LC ++R EA+ + + + K G P +Y
Sbjct: 598 VDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEK-GDPPDVITYK 656
Query: 428 FLIKGLCE-EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ +GLC G ++EA+ EM+ KG P + G++ EG
Sbjct: 657 IVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSF-----GFLAEG 697
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 132/277 (47%), Gaps = 34/277 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ TFNAL+ G R G ++ ++ M G E D Y+Y+ L++ C+ + EA ++
Sbjct: 300 PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEI 359
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M ++ E + V YNT+IG C+ + A E R + GV TF L+ G C
Sbjct: 360 LHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCL 419
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK-------ARVV-- 415
+ + A+ ++ +M KG +P+ T +LI LC +RR+ EAL +LK AR V
Sbjct: 420 TSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVV 479
Query: 416 -------------------------KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
G+ + +Y LI GLC+ ++EEA ++ +M+
Sbjct: 480 YNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMI 539
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+G +P Y+ + + ++G+++ A + + M N
Sbjct: 540 MEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLN 576
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 164/361 (45%), Gaps = 32/361 (8%)
Query: 126 DVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVR 185
D++R R P++ L LF+ + P VF L++ ++ ++ + ++R
Sbjct: 64 DLLR---RQPDSSSALSLFQ-WASAQPNYSAHPSVFHELLR---QLARAGSFDSMLTLLR 116
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD---VKRVVR 242
+ S + V ST + I+ E + A I ++R
Sbjct: 117 QMHSSKIPVDEST-----------------FLIFLETYATSHHLHAEINPLFLLMERDFA 159
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+ +N + + + VE + +M PD ++++L+ C+ ++R A
Sbjct: 160 VKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAI 219
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ E+M + + D + T++ GF E ++ A M SG E +SV+ LVNG
Sbjct: 220 LMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGL 279
Query: 363 CRAGDVDSAI-LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G ++ A+ +Y + +GF P+ T L+ LC + + L+++ + K G
Sbjct: 280 CKEGRIEEALRFIYEE---EGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEK-GFEL 335
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI GLC+ G+++EA+++ MV + EP+ Y+ I KE +VE AT L
Sbjct: 336 DVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELA 395
Query: 482 K 482
+
Sbjct: 396 R 396
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 162/370 (43%), Gaps = 43/370 (11%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVK-----TYRE-- 153
C+ + +Y T+I L + + A ++ RV L S P + F L++ + RE
Sbjct: 368 CEPNTVTYNTLIGTLCKENHVEAATELARV-LTSKGVLPDVCTFNSLIQGLCLTSNREIA 426
Query: 154 -----------CGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
C F + +LI+ C E +++ + +++ + G + V N
Sbjct: 427 MELFEEMKEKGCDPDEFTYSILIESLCSE----RRLKEALMLLKEMELSGCARNVVVYNT 482
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
LI + + V +I+ D ++ V + T+N L+ G +
Sbjct: 483 LIDGLCKNNRVGDAEDIF----------------DQMEMLGVSRSSVTYNTLINGLCKSK 526
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
E+ + +M G +PD ++Y+ ++ FC++ ++ A + + M E D+V Y
Sbjct: 527 RVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYG 586
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
T+IGG C+ G + A + R + + G+ + + ++ C+ A+ ++ +M K
Sbjct: 587 TLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEK 646
Query: 382 GFEPEGSTIEVLIGELCD-KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
G P+ T +++ LC+ + EA+D +++ G+ P S+ FL +GLC ME
Sbjct: 647 GDPPDVITYKIVFRGLCNGGGPIQEAVD-FTVEMLEKGILPEFPSFGFLAEGLCSLS-ME 704
Query: 441 EALKVQAEMV 450
+ L MV
Sbjct: 705 DTLIQLINMV 714
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 106/221 (47%), Gaps = 4/221 (1%)
Query: 265 KVEDVWVEMAR-LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
++ +++ M R +PD Y+V +++ + +++ E L +M V DV +N +
Sbjct: 146 EINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNIL 205
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I C+ ++ A +M G+ TF L+ G+ DV+ A+ + M G
Sbjct: 206 IRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGC 265
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
E ++ VL+ LC + R+ EAL + + G P + ++ L+ GLC G +++ L
Sbjct: 266 ELTSVSVNVLVNGLCKEGRIEEALRFIYE---EEGFCPDQVTFNALVNGLCRTGHIKQGL 322
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ M+ KGFE + Y++ I G K G ++ A + M
Sbjct: 323 EMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHM 363
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 1/249 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R +PNV T+N ++ ++ + + EM G PD +Y+ ++ FC ++ EA
Sbjct: 231 RGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEA 290
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L++EM +NV D V +N ++ G C+ G ++ A M G E ++ T+ L++G
Sbjct: 291 TRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDG 350
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC +D AI V M KG P S+ +LI C +R+ EA +L K L P
Sbjct: 351 YCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEK-NLTP 409
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y L++GLC+ G+ EAL + EM G P L YS +DG+ K G+++ A L
Sbjct: 410 DTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLL 469
Query: 482 KEMFENQVR 490
KEM E +++
Sbjct: 470 KEMHERRIK 478
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 132/261 (50%), Gaps = 3/261 (1%)
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
A + +GK K + ++P+ TFN L+ G EG ++ ++ EM G EP+ SY+ +
Sbjct: 150 AVSVMGKMFK--LGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTV 207
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ C+ A +++ +M + +VV YNTII C+ + A EF EM G+
Sbjct: 208 INGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGI 267
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
VT+ +++G+C G ++ A ++ +M + P+ T +L+ LC + V EA
Sbjct: 268 PPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARC 327
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+ + K G P +Y L+ G C +M+EA+KV M+GKG P+L Y+ I+GY
Sbjct: 328 VSETMTEK-GAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGY 386
Query: 469 MKEGNVEMATMLRKEMFENQV 489
K + A L EM E +
Sbjct: 387 CKSKRMNEAKRLLSEMSEKNL 407
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +T+NALM G+ ++ V M GC P+ SY++L+ +C+ +RM EA++L
Sbjct: 339 PNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRL 398
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM +KN+ D V Y+T++ G C++G A F+EM SG+ + + L++G+C+
Sbjct: 399 LSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCK 458
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA--LDILKARVVKF---GL 419
G +D A+ + +M + +P +LI R +F A L++ K K G+
Sbjct: 459 HGHLDEALKLLKEMHERRIKPNIILYTILI------RGMFIAGKLEVAKELFSKLSADGI 512
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y +IKGL +EG +EA + +M GF P Y+ I G+++ + A
Sbjct: 513 RPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQ 572
Query: 480 LRKEM 484
L EM
Sbjct: 573 LIDEM 577
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 3/250 (1%)
Query: 239 RVVRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
R+VR+ RP+V F + ++ + + +M G + YS +VL+ C
Sbjct: 86 RMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLS 145
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ A + +M ++ D + +NT+I G C G++ A F EM SG E + +++
Sbjct: 146 HVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYN 205
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
++NG C+ G+ A+ V+ M + +P T +I LC R V EA++ L + +V
Sbjct: 206 TVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFL-SEMVD 264
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G+ P +Y ++ G C G++ EA ++ EMVG+ P ++ +DG KEG V
Sbjct: 265 RGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSE 324
Query: 477 ATMLRKEMFE 486
A + + M E
Sbjct: 325 ARCVSETMTE 334
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 85/175 (48%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ P+ T++ LM G + G + +++ EM G PD +YS+L+ FC+ + EA
Sbjct: 406 NLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEA 465
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KL +EM ++ ++ +++ Y +I G G++ A+E F ++ G+ T+ ++ G
Sbjct: 466 LKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKG 525
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
+ G D A + M GF P+ + V+I + A+ ++ V K
Sbjct: 526 LLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGK 580
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 62/119 (52%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R++PN+ + L+ G + G E ++++ +++ G PD ++Y+V++ +E EA
Sbjct: 476 RIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEA 535
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ + +M D D +YN II GF + + + A + EM + S TF+ L++
Sbjct: 536 YEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 192/421 (45%), Gaps = 55/421 (13%)
Query: 81 LKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPK 140
L NNP + L+F F + H S+Y +I L + L D++ + + +D
Sbjct: 69 LNNNPQVGLKFMEFCRLNFSLIHCFSTYELLIRSLCQMGL----HDLVEMVIGYMRSDGH 124
Query: 141 L---KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
L ++ LV ++ + G FDL K +EV+ G ++S
Sbjct: 125 LIDSRVLGFLVTSFAQAGK----FDLAKKLIIEVQ------------------GEEARIS 162
Query: 198 T--CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
+ N L+ E+ +G V +++E S PN TFN L+
Sbjct: 163 SFVYNYLLNELVKGGKVHEAIFLFKENLAFHSP----------------PNTWTFNILIR 206
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN-VE 314
G R G EK +++ M GC PD +Y+ L++ C+ + A L +E++ +N
Sbjct: 207 GLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCS 266
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
DV+ Y +II GF ++G++ A F EM SG+E + VTF L++G+ + G++ +A +
Sbjct: 267 PDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAM 326
Query: 375 YNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
+ M P+ T LI C D R + D++KAR V P +Y +I
Sbjct: 327 HEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVS----PNIYTYSVIIN 382
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
LC++ ++ EA + ++ P IY+ IDG+ K GNV+ A ++ EM E + R
Sbjct: 383 ALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRP 442
Query: 492 E 492
+
Sbjct: 443 D 443
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 1/203 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P V TFN L+ GF + G E + +MA C PD +++ L+ +C +R
Sbjct: 300 IEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGL 359
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+W+ M+ +NV ++ Y+ II C+ + A + R++ S V + +++G+
Sbjct: 360 KVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGF 419
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+AG+VD A ++ +M K P+ T +LI C K R+ EALDI K +++ G P
Sbjct: 420 CKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFK-KMLAIGCAPD 478
Query: 423 EKSYMFLIKGLCEEGKMEEALKV 445
+ L+ L + GK EA +
Sbjct: 479 NITISSLVACLLKAGKPSEAFHI 501
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 126/312 (40%), Gaps = 36/312 (11%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C + +Y T+I L +A + A D+++ + P + + ++ +R+ G
Sbjct: 229 CLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLG----- 283
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
K+E + ++ G+ V T N LI + +++ ++
Sbjct: 284 ---------------KLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHE 328
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
++ P+V TF +L+ G+ R G VW M P
Sbjct: 329 KMASYSC----------------IPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSP 372
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+ Y+YSV++ C++ R+ EA L +++ +V YN +I GFC+ G + A
Sbjct: 373 NIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIV 432
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
EM VTF L+ G+C G + A+ ++ M G P+ TI L+ L
Sbjct: 433 TEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKA 492
Query: 401 RRVFEALDILKA 412
+ EA I++
Sbjct: 493 GKPSEAFHIVQT 504
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 129/242 (53%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P V TFN L+ G R + V+ ++ EM+ +G +PD Y+Y L+ FC RM A
Sbjct: 216 VQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAV 275
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++ EMRD V + V + T+I C+ G + + +++M + GV V + LVNG
Sbjct: 276 KMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGL 335
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRA ++ +A + +M G +P+ T LI C ++ A+DI K ++ + +
Sbjct: 336 CRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDI-KQKMAEKEVSLD 394
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E +Y LI GL + G+ +A +V EM+ EP Y+ ID + ++G+V+ L K
Sbjct: 395 EVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLK 454
Query: 483 EM 484
EM
Sbjct: 455 EM 456
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 161/358 (44%), Gaps = 44/358 (12%)
Query: 139 PKLKLFEVLVKTYRECG---SAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
P+ +LF VL++ + G SA VFD M R +
Sbjct: 184 PETRLFNVLMRDFVRLGELVSARKVFDE------------------------MRRSVQPT 219
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
V T N LI + R + D DA G+ K++ V V+P+V+T+ AL+
Sbjct: 220 VVTFNTLISGMCRAR---------------DLDAVDGLYKEMSDV-GVKPDVYTYGALIK 263
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
GF R G E ++ EM G P+ ++ L+ C+E + L+++MR + V
Sbjct: 264 GFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMP 323
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
D+VAYN ++ G C + AE EM +G++ VT+ L++G C+ G +D A+ +
Sbjct: 324 DLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIK 383
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
M K + T LI L R +A +L+ +++ L P +Y +I C
Sbjct: 384 QKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLR-EMMEAALEPDNTTYTMVIDAFCR 442
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+G ++ K+ EM KG +P + Y+ ++G K G ++ A ML M V +D
Sbjct: 443 KGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDD 500
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 116/220 (52%), Gaps = 2/220 (0%)
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
++++ G P+ ++VLM F + A K+++EMR ++V+ VV +NT+I G C
Sbjct: 174 YLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCR 232
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
++ + ++EM GV+ T+ L+ G+CR G +++A+ ++N+M G P
Sbjct: 233 ARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVV 292
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
LI C + V +D+ + V+ G+ P +Y L+ GLC ++ A + EM
Sbjct: 293 FTTLIDAHCKEGNVNAGMDLYQDMRVR-GVMPDLVAYNALVNGLCRARNLKAAESIVEEM 351
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G +P Y+ IDG K+G ++MA ++++M E +V
Sbjct: 352 KNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEV 391
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 27/271 (9%)
Query: 152 RECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG 209
R+ G P VF LI + N+ +D+ + + RG+ + NAL+ + R
Sbjct: 282 RDTGVNPNAVVFTTLIDAHCKEGNVN---AGMDLYQDMRVRGVMPDLVAYNALVNGLCRA 338
Query: 210 KGVISGYEIYRE----------------VFGLDSDATAGIGKDVKRVV---RVRPNVHTF 250
+ + + I E + G D + D+K+ + V + T+
Sbjct: 339 RNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTY 398
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
AL+ G + G E V EM EPD +Y++++ FC + ++ KL +EM++
Sbjct: 399 TALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQN 458
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
K + VV YN I+ G C++G+M A+ M GV +T+ L++G C+ G V +
Sbjct: 459 KGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVAN 518
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
+ + + KG P+ + LI EL K+
Sbjct: 519 SEELESS---KGMVPDFAVYTSLISELAKKK 546
>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
javanica]
Length = 431
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 191/418 (45%), Gaps = 25/418 (5%)
Query: 91 FFSF--TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ + S +H+L SY T+IH L ++ A+ +I+V + +F ++
Sbjct: 3 FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIL 62
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+T S +VF LI LE + C + R L V TC ++ + +
Sbjct: 63 ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTR---EHKLWVPFDTCRKVLEHLMK 119
Query: 209 GKGVISGYEIYREVFGLD----------------SDATAGIGKDVKRVVR---VRPNVHT 249
+ + Y E+ D + + V + +RP V +
Sbjct: 120 LRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXS 179
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N LM G+ R G ++ + M G +PD Y+YSVL+ +E M + +L++EM
Sbjct: 180 YNTLMNGYIRLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEML 239
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + + V + T+I G C+ G + A E +++M + +T+ L G C+ GD++
Sbjct: 240 XKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLN 299
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + ++M KG +P+ T LI C + + A + K R+++ + + +Y L
Sbjct: 300 QAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRK-RMIQENIXLDDVAYTAL 358
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
I GLC+EG+ +A K+ EM+ G +P Y+ I+ + K+G+V KEM N
Sbjct: 359 ISGLCQEGRSXDAEKMLREMLSVGLKPDXGTYTMIINEFCKKGDVWKGXKXLKEMQRN 416
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+N L G ++G + + EM+ G +PD ++Y+ L+ C+E + A
Sbjct: 278 LXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAF 337
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +
Sbjct: 338 EHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDXGTYTMIINEF 397
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ GDV +M R G P T VL+
Sbjct: 398 CKKGDVWKGXKXLKEMQRNGHVPXVVTYNVLM 429
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ T+ L+ G +EG + + M + D +Y+ L++ C+E R +AE
Sbjct: 313 LKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAE 372
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+ EM ++ D Y II FC+ G++ + + +EM +G VT+ L+NG
Sbjct: 373 KMLREMLSVGLKPDXGTYTMIINEFCKKGDVWKGXKXLKEMQRNGHVPXVVTYNVLMNG 431
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 179/408 (43%), Gaps = 24/408 (5%)
Query: 87 LALRFFSFT--QHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF 144
LAL+F ++ Q H T HIL RAR+ A+ ++ L+ P + F
Sbjct: 34 LALKFLNWVIKQPNLELNHVTHIICTTTHILVRARMYNFAKTTLKHLLQLPIGLNSV--F 91
Query: 145 EVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
L++TY C S P VFDLLI+ CL + + V ++ RGL+ V TCN ++
Sbjct: 92 GALMETYPICNSNPAVFDLLIRVCLRNR---MVGDAVQTFYLMGFRGLNPSVYTCNMVLG 148
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ + + V + ++ + GI P+V TFN L+ G F+
Sbjct: 149 SLVKEQKVDMFWSFFKGMLA------KGIC----------PDVATFNILLNALCERGKFK 192
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ +M G P +Y+ L+ +C++ R + A +L + M K + DV YN I
Sbjct: 193 NAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFI 252
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
C A+ + M + V + +T+ L++G+ R G ++ A V+++M
Sbjct: 253 DNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLL 312
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P T LI C + EAL ++ +V GL P E +Y L+ GL + +
Sbjct: 313 PNSITYNTLIAGHCTTGNIGEALRLMDV-MVSHGLRPNEVTYGALLNGLYKNAEFGMVSS 371
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ M G S Y+A IDG K G +E A L +M + V +
Sbjct: 372 ILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPD 419
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 35/287 (12%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V P+V TF+ L+ GF+R G +++ +M + G P+ YS L+ +C+ ++E
Sbjct: 414 VSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKE 473
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A + M D N ++ FC G++ AE F M G++ +SVTF+ ++N
Sbjct: 474 ALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIIN 533
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI----------- 409
GY +GD A V++ M G P T L+ LC + EAL
Sbjct: 534 GYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAV 593
Query: 410 -----------------------LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
L +V P +Y LI GLC++GK+ AL +
Sbjct: 594 DNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLS 653
Query: 447 AEMVGKG-FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ + KG P+ +Y++ +DG +K G+ A + +EM V +
Sbjct: 654 GKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPD 700
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 1/221 (0%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M G P Y+ ++++ +E+++ ++ M K + DV +N ++ CE G+
Sbjct: 131 MGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGK 190
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
A R+M SGV ++VT+ L+N YC+ G +A + + M KG + T V
Sbjct: 191 FKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNV 250
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
I LC R + +LK R+ + ++P E +Y LI G EGK+E A KV EM
Sbjct: 251 FIDNLCRDSRSAKGYLLLK-RMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLF 309
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
P+ Y+ I G+ GN+ A L M + +R +
Sbjct: 310 NLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNE 350
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 1/235 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RPN T+ AL+ G Y+ F V + M G SY+ ++ C+ + EA
Sbjct: 346 LRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAV 405
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L ++M +V DVV ++ +I GF +G++ A+E +M +G+ + + + L+ Y
Sbjct: 406 QLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNY 465
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G + A+ Y M G + T VL+ C ++ EA + + + GL P
Sbjct: 466 CKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEA-EYFMNHMSRMGLDPN 524
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
++ +I G G +A V +M G PSL Y + G G++ A
Sbjct: 525 SVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEA 579
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 2/225 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T N L+ F R G E+ E M+R+G +P+ ++ ++ + +A ++++M
Sbjct: 492 TCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKM 551
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ Y ++ G C G + A +FF + +V F + CR+G++
Sbjct: 552 NSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNL 611
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF-PTEKSYM 427
AI + N+M F P+ T LI LC K ++ AL +L + ++ GL P Y
Sbjct: 612 SDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAAL-LLSGKAIEKGLLSPNPAVYT 670
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
L+ GL + G AL + EM+ K EP ++ ID Y ++G
Sbjct: 671 SLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKG 715
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 10/276 (3%)
Query: 224 GLDSDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
GL +A G+ + +R VR + ++ A++ G + G E+ + +M ++ P
Sbjct: 359 GLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNP 418
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D ++SVL+ F ++ A+++ +M + + + Y+T+I +C++G + A +
Sbjct: 419 DVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAY 478
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI---GEL 397
M SG + T LV +CR G ++ A N M R G +P T + +I G
Sbjct: 479 AVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNS 538
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
D + F D + + FG FP+ +Y L+KGLC G + EALK +
Sbjct: 539 GDALKAFSVFDKMNS----FGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVD 594
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
I++ + + GN+ A L EM N ++
Sbjct: 595 NVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDN 630
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 123/251 (49%), Gaps = 2/251 (0%)
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
GK +++ + + PN + +L+ G + G ++ EM EPD +++V++ +
Sbjct: 654 GKAIEKGL-LSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYS 712
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + + + M+ KN+ ++ YN ++ G+ + MAR +++M G
Sbjct: 713 RKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKF 772
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
++ L+ GYC++ D AI + + +G + T +LI + C++ + +A +++K +
Sbjct: 773 SWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVK-Q 831
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+ +F + P +Y L GL +A +V ++ G P+ + Y I+G + GN
Sbjct: 832 MNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGN 891
Query: 474 VEMATMLRKEM 484
++ A L+ EM
Sbjct: 892 IKGAMKLQDEM 902
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 146/307 (47%), Gaps = 25/307 (8%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
DI+ + S+ L ++T N L+ ++ + + +Y+++ +
Sbjct: 722 DILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDM------------------I 763
Query: 242 R--VRPNVHTFNALMVGFYREGAFEKVEDV--WVEMARLGCEPDCYSYSVLMAVFCEERR 297
R P+ ++++L++G+ + +F+ + W+ + G D +++++L+ FCE
Sbjct: 764 RHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLE--GHVIDRFTFNMLITKFCERNE 821
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
M++A +L ++M V +V YN + G + +A + + SG ++ +
Sbjct: 822 MKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYIT 881
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L+NG CR G++ A+ + ++M G + ++ L + +++ A+ +L +++
Sbjct: 882 LINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDL-MLEM 940
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ PT ++ L+ C+E + +AL++++ M + + Y+ I G G++E A
Sbjct: 941 QIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAA 1000
Query: 478 TMLRKEM 484
L +EM
Sbjct: 1001 FKLYEEM 1007
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 2/241 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TF+ ++ G+ G K V+ +M G P ++Y L+ C + EA K
Sbjct: 523 PNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKF 582
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +R D V +NT + C G ++ A EM + + T+ +L+ G C+
Sbjct: 583 FHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCK 642
Query: 365 AGDVDSAILVYNDMCRKG-FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G + +A+L+ KG P + L+ L AL I + + K + P
Sbjct: 643 KGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNK-DVEPDT 701
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++ +I +GK + + + M K +L Y+ + GY K + ML K+
Sbjct: 702 VAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKD 761
Query: 484 M 484
M
Sbjct: 762 M 762
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 78/204 (38%), Gaps = 35/204 (17%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV T+NAL G R F K V + G P Y L+ C ++ A
Sbjct: 837 VIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAM 896
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGG-----------------------------------F 327
KL +EM+ + VA + I+ G +
Sbjct: 897 KLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVY 956
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ +A+A E M V+ V + L++G C GD+++A +Y +M ++ P
Sbjct: 957 CKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNT 1016
Query: 388 STIEVLIGELCDKRRVFEALDILK 411
S VLI C E+ +L+
Sbjct: 1017 SIYIVLIDSFCAGNYQIESEKLLR 1040
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ +++ P V TF LM + +E K ++ M + D +Y+VL++ C
Sbjct: 935 DLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCAN 994
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+ A KL+EEM+ +++ + Y +I FC +E+ R++
Sbjct: 995 GDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDI 1042
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 187/407 (45%), Gaps = 29/407 (7%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
SY T+IH L +++ A+ +I+V + +F +++T S +VF LI
Sbjct: 2 SYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIA 61
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
LE + C + R V TC ++ + + K + Y E+
Sbjct: 62 AYLESGFLRDAIECYRLTR---EHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 118
Query: 227 ----------------SDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFEKVE 267
D + + V + +RP+V ++N LM G+ R G ++
Sbjct: 119 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGF 178
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
+ M G +PD Y+YSVL+ C+E +M +A +L++EM K + + V + T+I G
Sbjct: 179 XLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 238
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M KG +P+
Sbjct: 239 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 298
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI C + + A + K R+++ + E +Y LI G C+EG+ +A K+
Sbjct: 299 ITYTTLINGCCKEGDLDSAFEHRK-RMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLR 357
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
EM+ G +P Y+ I+ + K G+V + L KEM Q DG
Sbjct: 358 EMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEM------QRDG 398
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 80/152 (52%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ + EM+ G +PD +Y+ L+ C+E + A
Sbjct: 259 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAF 318
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N+ D VAY +I G C+ G AE+ REM G++ + T+ ++N +
Sbjct: 319 EHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEF 378
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ GDV + +M R G P T VL+
Sbjct: 379 CKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLM 410
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + + + E+
Sbjct: 243 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM------------- 289
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
V ++P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 290 ---SVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRL----DEVAYTALISG 342
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM ++ D Y II FC+ G++ + +EM G S
Sbjct: 343 XCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPS 402
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 403 VVTYNVLMNG 412
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 221/485 (45%), Gaps = 38/485 (7%)
Query: 28 TSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLK-NNPH 86
++ ++ P+D ++ + L + SK W H S L Q QI L L+ +N
Sbjct: 40 SADASIPNDAVRQIL---IGLRSFGASKFLWGHHFQTLASVLNTHQVDQILLSLRVDNSD 96
Query: 87 LALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEV 146
AL F +++ +HS S+ + H+++R R V+ + + L E+
Sbjct: 97 SALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCEL 156
Query: 147 LVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
L ++R+ V+D+L C E + + ++ + L V ++T N+L++ +
Sbjct: 157 LCNSFRDWDLNNVVWDML-ACAYS--RAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL 213
Query: 207 SRGKGVISGYEIYREVFG-------------LDSDATAGIGKDVKRVVR------VRPNV 247
R ++ +++Y E+ +D +D +R P+V
Sbjct: 214 -RHTDIM--WDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSV 270
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
+FNALM GF + G+ + + + M + G PD YSY++L+ C M EA + +
Sbjct: 271 VSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTND 330
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M + VE D+V YN + GF +G ++ A + + M L+G+ VT+ L+ G+C+ G+
Sbjct: 331 MENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGN 390
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
++ + + M +G + T VL+ LC R+ EA+ +L V GL P +Y
Sbjct: 391 IEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEV-IGLKPDLLTY- 448
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
G +EEA+++ EM K P+ + SA I G ++G + A M + ++
Sbjct: 449 -------SRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKS 501
Query: 488 QVRQE 492
V +E
Sbjct: 502 DVAEE 506
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 165/328 (50%), Gaps = 16/328 (4%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG----KGVISGYEIYREVFGLDSDATA 231
IE + ++S+GL + + T L+ + + + VI +E+ EV GL D
Sbjct: 390 NIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEM--EVIGLKPDLLT 447
Query: 232 GIGKDVKRVV---------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
V+ + R+ PN +A++ G + +GA + + + + + +
Sbjct: 448 YSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEI 507
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
Y++++ + + + EA + ++++ +K + +V +N++I GFC+ G++A A +
Sbjct: 508 ILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDT 567
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
+ + G+ +SVT+ L+NGYC GD+ S + ++M K +P T V++ LC + R
Sbjct: 568 IKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGR 627
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ E++ +LK + GLFP + +Y +I+ C+ +++A ++ +M+ +PS Y+
Sbjct: 628 LHESVQLLKYMYAR-GLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYN 686
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQVR 490
I+G GN++ A L + + +R
Sbjct: 687 VLINGLCVYGNLKDADRLLVTLQDQSIR 714
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 145/310 (46%), Gaps = 22/310 (7%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE------------VFG 224
+E +++ + S+ + C+A+I + KG IS ++Y + ++
Sbjct: 453 VEEAIELYEEMCSKRIYPNSFVCSAIISGLFE-KGAISEAQMYFDSVTKSDVAEEIILYN 511
Query: 225 LDSDATAGIG------KDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+ D A +G + K+++ + P + TFN+L+ GF ++G + + +
Sbjct: 512 IMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVH 571
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G P +Y+ LM +CEE M + EM K ++ + Y ++ G C+ G + +
Sbjct: 572 GLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHES 631
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ + M G+ +T+ ++ +C+A D+ A ++N M + +P T VLI
Sbjct: 632 VQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLING 691
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC + +A D L + + T+ +Y +IK C +G ++ AL +MV +GFE
Sbjct: 692 LCVYGNLKDA-DRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEV 750
Query: 457 SLEIYSAFID 466
S+ YSA I+
Sbjct: 751 SIRDYSAVIN 760
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 94/214 (43%), Gaps = 1/214 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P T+ ++ G +EG + + M G PD +Y+ ++ FC+ +++A
Sbjct: 608 IKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAF 667
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L +M +++ V YN +I G C G + A+ + + + V + ++ +
Sbjct: 668 QLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAH 727
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C GDV +A++ ++ M +GFE +I LC KR + ++ G+ P
Sbjct: 728 CAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLC-KRNLITDAKFFFCMMLTHGIPPD 786
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+ + ++ G ++ A M+ G P
Sbjct: 787 QDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 127/242 (52%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P +N ++ GF +EG +V+ EM +G P +Y+ L+ FC+ + A KL
Sbjct: 505 PTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKL 564
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M+ K ++ D+ AY T+I GFC+ +M A E E+ +G+ + + ++ G+
Sbjct: 565 LNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKN 624
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+V+ AI +Y M +G + T LI L R+ A DI + K G+ P ++
Sbjct: 625 MNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSK-GILPDDR 683
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI GLC +G+ E A K+ +M GK PS+ IY+ I G+ KEGN++ A L EM
Sbjct: 684 AHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEM 743
Query: 485 FE 486
+
Sbjct: 744 LD 745
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 147/307 (47%), Gaps = 17/307 (5%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++++G+S V + N +I R + + ++Y+E+ LD+ T PN
Sbjct: 393 VIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM--LDNGFT--------------PN 436
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
TF LM G++++G E ++ M P + +++ C+ R E L+
Sbjct: 437 AVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFN 496
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+ + + YNTII GF + G + A +REM G+ S+VT+ L++G+C+
Sbjct: 497 KFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGN 556
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++D A+ + NDM RKG + + LI C +R + A ++L + GL P Y
Sbjct: 557 NIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLN-ELRGAGLSPNRFIY 615
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+I G +EEA+ + +MV +G L+ Y++ IDG +K G + A+ + EM
Sbjct: 616 NSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLS 675
Query: 487 NQVRQED 493
+ +D
Sbjct: 676 KGILPDD 682
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 158/380 (41%), Gaps = 66/380 (17%)
Query: 146 VLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
VLV E G P + +LI C + NIEK + + ++G+ V + N+
Sbjct: 284 VLVNEISESGLVPNKVTYSVLIDGCCKNGNIEK---AFEFYSEMKTKGIRSSVYSLNS-- 338
Query: 204 WEVSRGKGVISGY---EIYREVFGLDSDAT-AGIGKDVKRVVRVRPNVHTFNALMVGFYR 259
++ GY + ++ F + +DA +G+ NV TFN L+ +
Sbjct: 339 --------ILEGYLKCQSWQNAFTMFNDALESGLA-----------NVFTFNTLLSWLCK 379
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
EG + ++W E+ G P+ SY+ ++ C + + A K+++EM D + V
Sbjct: 380 EGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVT 439
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA-------------- 365
+ ++ G+ + G++ A F M + + + T ++ G C+A
Sbjct: 440 FTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFV 499
Query: 366 ---------------------GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G+++ A VY +MC G P T LI C +
Sbjct: 500 SQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNID 559
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
AL +L K GL K+Y LI G C+ M+ A ++ E+ G G P+ IY++
Sbjct: 560 LALKLLNDMKRK-GLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSM 618
Query: 465 IDGYMKEGNVEMATMLRKEM 484
I G+ NVE A L K+M
Sbjct: 619 ITGFKNMNNVEEAIDLYKKM 638
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 117/234 (50%), Gaps = 2/234 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V + P+ T+ +L+ GF + + + +M R G + D +Y L+ FC+ R M+
Sbjct: 536 VGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKS 595
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +L E+R + + YN++I GF + + A + +++M G+ T+ L++
Sbjct: 596 AHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLID 655
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G ++G + A ++ +M KG P+ VLI LC+K + A IL+ K +
Sbjct: 656 GLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGK-NMI 714
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK-EGN 473
P+ Y LI G +EG ++EA ++ EM+ +G P Y ++G K +GN
Sbjct: 715 PSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDGN 768
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 2/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P TF +++ +EG + + +M G + + LM +C + +R A L
Sbjct: 226 PPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVL 285
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+ + + + V Y+ +I G C+ G + +A EF+ EM G+ SS + ++ GY +
Sbjct: 286 VNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLK 345
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+A ++ND G T L+ LC + ++ EA ++ + K G+ P
Sbjct: 346 CQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAK-GISPNVV 403
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
SY +I G C + + A KV EM+ GF P+ ++ +DGY K+G++E A + M
Sbjct: 404 SYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM 463
Query: 485 FENQVRQED 493
+ + D
Sbjct: 464 KDANILPTD 472
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 109/220 (49%), Gaps = 10/220 (4%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM G P +++ ++ +E + EA +L ++M + ++ +++ G+C G
Sbjct: 218 EMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQG 277
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A E+ SG+ + VT+ L++G C+ G+++ A Y++M KG ++
Sbjct: 278 NLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLN 337
Query: 392 -VLIGEL-CDK-RRVFEAL-DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+L G L C + F D L++ + F T L+ LC+EGKM EA +
Sbjct: 338 SILEGYLKCQSWQNAFTMFNDALESGLANVFTFNT------LLSWLCKEGKMNEACNLWD 391
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
E++ KG P++ Y+ I G+ ++ N+ A + KEM +N
Sbjct: 392 EVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDN 431
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+E + EAE+ + + + + VE D AY+ + C A REM +G
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
TF ++ + G+V A+ + +DM G + L+ C + + AL +L
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSAL-VLVNE 288
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ + GL P + +Y LI G C+ G +E+A + +EM KG S+ ++ ++GY+K
Sbjct: 289 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLK 345
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 132/242 (54%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN++T+N L+ + R G FE+ ++ EM G + SY+ L+A C ++ +A
Sbjct: 104 VEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAA 163
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL + MR + ++ +N ++ G+ + G+M+ A FF +M +G + S+VT+ L+ G+
Sbjct: 164 KLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGF 223
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRA D+ A +DM +G EP T +LI + + +A +IL A + K GL
Sbjct: 224 CRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEIL-AGMEKAGLEVD 282
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L++ LC EG M++A K+ M KG EPS IY I GY +EG+ A L
Sbjct: 283 AHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIM 342
Query: 483 EM 484
EM
Sbjct: 343 EM 344
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ R RP++ TFN L+ G+ + G + +M G +P +Y++L+A FC
Sbjct: 167 DMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRA 226
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R M A + +M+++ +E V Y +I F M +A E M +G+E + T+
Sbjct: 227 RDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTY 286
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
LV C G++ A ++ M KG EP +++I + ++AL ++
Sbjct: 287 GVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQ 346
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
K GL P SY I+ LC++ K +EA + +M
Sbjct: 347 K-GLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 147/313 (46%), Gaps = 6/313 (1%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR-EVFGLDSDATA 231
N+ I C ++R G + K A I EV G G + Y + G
Sbjct: 133 NVPDIIPCTTLIRGFCRMGKTRKA----AKILEVLEGSGAVPDVITYNVMISGYCKAGEI 188
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
V + V P+V T+N ++ G ++ +V M + C PD +Y++L+
Sbjct: 189 NNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C + + +A KL +EMRD+ DVV YN ++ G C+ G + A +F +M SG + +
Sbjct: 249 TCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+T ++ C G A + DM RKGF P T +LI LC K + A+DIL+
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
++ K G P SY L+ G C+E KM+ A++ MV +G P + Y+ + K+
Sbjct: 369 -KMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 472 GNVEMATMLRKEM 484
G VE A + ++
Sbjct: 428 GKVEDAVEILNQL 440
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 130/252 (51%), Gaps = 6/252 (2%)
Query: 231 AGIGKDVKRVVRVR-----PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
+G+G+ +K + +R P+V T+N L+ G +EG ++ +M GC+P+ ++
Sbjct: 253 SGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
++++ C R +AEKL +M K VV +N +I C G + RA + +M
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPK 372
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G + +S+++ L++G+C+ +D AI M +G P+ T ++ LC +V +
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
A++IL K G P +Y +I GL + GK +A+K+ EM K +P YS+ +
Sbjct: 433 AVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 466 DGYMKEGNVEMA 477
G +EG V+ A
Sbjct: 492 GGLSREGKVDEA 503
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN ++N L+ GF +E ++ + M GC PD +Y+ ++ C++ ++ +A +
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ ++ K ++ YNT+I G + G+ +A + EM ++ ++T+ LV G
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G VD AI +++ R G P T ++ LC R+ A+D L ++ G PTE
Sbjct: 496 REGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFL-VYMINRGCKPTE 554
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
SY LI+GL EG +EAL++ E+ KG
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN L+ R+G + D+ +M + GC+P+ SY+ L+ FC+E++M A +
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M + D+V YNT++ C+ G++ A E ++ G +T+ +++G +
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG AI + ++M K +P+ T L+G L + +V EA+ + G+ P
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH-EFERMGVRPNAV 520
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ ++ GLC+ + + A+ M+ +G +P+ Y+ I+G EG + A L E+
Sbjct: 521 TFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 151/348 (43%), Gaps = 22/348 (6%)
Query: 132 LRSPENDPKLK-LFEVLVKTY-RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMS 189
LRS + KLK EVL + R+C + +LI+ + + +D +R
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMR---D 267
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
RG + V T N L+ G+ + + L+ ++G +PNV T
Sbjct: 268 RGCTPDVVTYNVLV------NGICKEGRLDEAIKFLNDMPSSG----------CQPNVIT 311
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
N ++ G + E + +M R G P ++++L+ C + + A + E+M
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ + ++YN ++ GFC+ +M RA E+ M G VT+ ++ C+ G V+
Sbjct: 372 KHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A+ + N + KG P T +I L + +A+ +L K L P +Y L
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK-DLKPDTITYSSL 490
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ GL EGK++EA+K E G P+ +++ + G K + A
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRA 538
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 98/187 (52%), Gaps = 4/187 (2%)
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ E K E M D++ T+I GFC +G+ +A + + SG +T+
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNV 177
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
+++GYC+AG++++A+ V + R P+ T ++ LCD ++ +A+++L R+++
Sbjct: 178 MISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD-RMLQR 233
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+P +Y LI+ C + + +A+K+ EM +G P + Y+ ++G KEG ++ A
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 478 TMLRKEM 484
+M
Sbjct: 294 IKFLNDM 300
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 114/245 (46%), Gaps = 14/245 (5%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V N H + G EG F+ +E+ M G PD + L+ FC + R+A
Sbjct: 103 VESNNHLRQLVRTGELEEG-FKFLEN----MVYHGNVPDIIPCTTLIRGFCRMGKTRKAA 157
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+ E + DV+ YN +I G+C+ GE+ A M +S VT+ ++
Sbjct: 158 KILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSL 214
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +G + A+ V + M ++ P+ T +LI C V +A+ +L + G P
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLD-EMRDRGCTPD 273
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI-----DGYMKEGNVEMA 477
+Y L+ G+C+EG+++EA+K +M G +P++ ++ + G + +A
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 478 TMLRK 482
MLRK
Sbjct: 334 DMLRK 338
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 120/290 (41%), Gaps = 39/290 (13%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFD- 162
S+ ++ +I+ L R L+G A D++ E PK C ++
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDIL-------EKMPK-----------HGCQPNSLSYNP 384
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
LL C E +K++ ++ + ++SRG + T N ++ + + V EI +
Sbjct: 385 LLHGFCKE----KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ- 439
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
L S + P + T+N ++ G + G K + EM +PD
Sbjct: 440 --LSSKGCS-------------PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+YS L+ E ++ EA K + E V + V +N+I+ G C+ + RA +F
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVY 544
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
M G + + ++ L+ G G A+ + N++C KG S +V
Sbjct: 545 MINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKRSSAEQV 594
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 164/313 (52%), Gaps = 17/313 (5%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
+ + D+ ++S+G+S V T +ALI SG+ ++ DA
Sbjct: 211 KHVNDAFDLYSEMVSKGISPNVVTYSALI----------SGFFTVGQL----KDAIDLFN 256
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
K + + ++P+V+TFN L+ GF ++G ++ + V+ M + G +P+ +Y LM +C
Sbjct: 257 KMI--LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 314
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ + +A+ + M + V D+ +YN +I GFC+I ++ A F+EM + VT
Sbjct: 315 VKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVT 374
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L++G C+ G + A+ + ++M +G P+ T ++ LC +V +A+ +L ++
Sbjct: 375 YNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALL-TKL 433
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
G+ P +Y LI GLC+ G++E+A + +++ KG+ ++ Y+ I G+ +G
Sbjct: 434 KDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLF 493
Query: 475 EMATMLRKEMFEN 487
+ A L +M +N
Sbjct: 494 DEALALLSKMKDN 506
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 133/248 (53%), Gaps = 1/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+PNV ++ ++ G ++ D++ EM G P+ +YS L++ F ++++A
Sbjct: 193 VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAI 252
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ +M +N++ DV +N ++ GFC+ G+M + F M G++ + VT+ L++GY
Sbjct: 253 DLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 312
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +V+ A + M ++G P+ + +LI C ++V EA+++ K K + P
Sbjct: 313 CLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKH-IIPD 371
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI GLC+ GK+ ALK+ EM +G P + YS+ +D K V+ A L
Sbjct: 372 VVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLT 431
Query: 483 EMFENQVR 490
++ + +R
Sbjct: 432 KLKDQGIR 439
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 1/246 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
PN TF L+ G +G + + +G + D Y L+ C+ R A
Sbjct: 124 HPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALD 183
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L + V+ +VV Y+TII G C+ + A + + EM G+ + VT+ L++G+
Sbjct: 184 LLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFF 243
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G + AI ++N M + +P+ T +L+ C ++ E + A ++K G+ P
Sbjct: 244 TVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVF-AMMMKQGIKPNV 302
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ G C ++ +A + M +G P ++ Y+ IDG+ K V+ A L KE
Sbjct: 303 VTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKE 362
Query: 484 MFENQV 489
M +
Sbjct: 363 MHHKHI 368
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 105/200 (52%), Gaps = 3/200 (1%)
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
+G P+ +++ L+ C + ++ +A + + + D V Y T+I G C++GE
Sbjct: 121 MGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRA 180
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A + R + + V+ + V + +++G C+ V+ A +Y++M KG P T LI
Sbjct: 181 ALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 240
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
++ +A+D+ +++ + P ++ L+ G C++GKM+E V A M+ +G +
Sbjct: 241 GFFTVGQLKDAIDLFNKMILE-NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 299
Query: 456 PSLEIYSAFIDGY--MKEGN 473
P++ Y + +DGY +KE N
Sbjct: 300 PNVVTYCSLMDGYCLVKEVN 319
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 17/224 (7%)
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE------IGEMARAEE 338
YS + F + +A L+ + +N + +N I+G + + +++ E
Sbjct: 44 YSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQME 103
Query: 339 F---------FRE-MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
F F+ L G +++TF L+ G C G + A+L ++++ GF+ +
Sbjct: 104 FEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQV 163
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
LI LC ALD+L+ RV + P Y +I G+C++ + +A + +E
Sbjct: 164 GYGTLIHGLCKVGETRAALDLLR-RVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSE 222
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
MV KG P++ YSA I G+ G ++ A L +M ++ +
Sbjct: 223 MVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPD 266
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 166/314 (52%), Gaps = 17/314 (5%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
++ + D+ ++S+G+S V T NALI SG+ I G DAT
Sbjct: 225 VKLVNEAFDLYSEMVSKGISPDVVTYNALI----------SGFCI----VGKMKDATDLF 270
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
K + + PNV+TFN L+ GF +E ++ ++V M + G +PD ++Y+ LM +C
Sbjct: 271 NKMIFE--NINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYC 328
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + +A+ ++ + + V ++ +Y+ +I GFC+I ++ A F+EM + + V
Sbjct: 329 LVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVV 388
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ L++G C+ G + A+ + ++M +G + T ++ LC +V +A+ +L +
Sbjct: 389 TYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALL-TK 447
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+ G+ P +Y L+ GLC+ G++E+A V +++ KG+ + IY+A I G+ G
Sbjct: 448 MKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGL 507
Query: 474 VEMATMLRKEMFEN 487
+ + L +M EN
Sbjct: 508 FDESLDLLSKMEEN 521
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 170/360 (47%), Gaps = 18/360 (5%)
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
L + +L+ + + G P F +L K L++ + T +++ GL +K
Sbjct: 107 LVILSILINCFSQLGQNPLSFSVLAKI-LKMGYEPNVITLTTLIK-----GLCLKGQIHQ 160
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD------VKRV--VRVRPNVHTFNA 252
AL + K V G+ + + +G + +G+ ++RV V+PNV +N
Sbjct: 161 ALQFH---DKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNT 217
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
++ + + D++ EM G PD +Y+ L++ FC +M++A L+ +M +N
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFEN 277
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ +V +N ++ GFC+ + A+ M G++ T+ L++ YC +V+ A
Sbjct: 278 INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAK 337
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
++N + ++G P + ++I C ++V EA+++ K + P +Y LI G
Sbjct: 338 HIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCN-NIIPDVVTYNSLIDG 396
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
LC+ GK+ ALK+ EM +G Y++ +D K V+ A L +M + ++ +
Sbjct: 397 LCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 456
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 149/356 (41%), Gaps = 38/356 (10%)
Query: 100 LCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPF 159
L + ++ Y TII + + +L+ A D+ + S P + + L+ + G
Sbjct: 207 LVQPNVVMYNTIIDSMCKVKLVNEAFDLYS-EMVSKGISPDVVTYNALISGFCIVGKMKD 265
Query: 160 VFDLLIKCCLEV--KNIEKIETCVD-------------IVRMLMSRGLSVKVSTCNAL-- 202
DL K E N+ VD ++ M+M +G+ V T N+L
Sbjct: 266 ATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMD 325
Query: 203 ----IWEVSRGKGV------------ISGYEIYREVFGL--DSDATAGIGKDVKRVVRVR 244
+ EV++ K + I Y I F D + K++ +
Sbjct: 326 RYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEM-HCNNII 384
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N+L+ G + G + EM G D +Y+ ++ C+ ++ +A L
Sbjct: 385 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIAL 444
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M+D+ ++ D+ Y T++ G C+ G + A F ++ + G + ++ G+C
Sbjct: 445 LTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCS 504
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G D ++ + + M G P T E++I L DK +A +L+ + + GLF
Sbjct: 505 HGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITR-GLF 559
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 145/268 (54%), Gaps = 9/268 (3%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + +++ ++ PN+ TFNAL+ F +EG F + E ++ +M + +PD
Sbjct: 270 YGRWSDASQLLSDMIEK--KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 327
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
++Y+ L+ FC R+ +A++++E M K+ DVV YNT+I GFC+ + E FRE
Sbjct: 328 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 387
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK-- 400
M G+ +VT+ L+ G GD D+A V+ M G P+ T +L+ LC+
Sbjct: 388 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 447
Query: 401 -RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+ E D ++ +K ++ Y +I+G+C+ GK+++ + + KG +P++
Sbjct: 448 LEKALEVFDYMQKSEIKLDIYI----YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 503
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFEN 487
Y+ I G + ++ A L K+M E+
Sbjct: 504 TYNTMISGLCSKRLLQEAYALLKKMKED 531
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 2/262 (0%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
D +G+ ++R+ + ++T+N L+ F R + +M +LG EP + S
Sbjct: 64 DVVISLGEKMQRL-EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 122
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ +C +R+ +A L ++M + D + + T+I G + + A M G
Sbjct: 123 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 182
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ + VT+ +VNG C+ GD D A+ + N M E + +I LC R V +AL
Sbjct: 183 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 242
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++ K K G+ P +Y LI LC G+ +A ++ ++M+ K P+L ++A ID
Sbjct: 243 NLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 301
Query: 468 YMKEGNVEMATMLRKEMFENQV 489
++KEG A L +M + +
Sbjct: 302 FVKEGKFVEAEKLYDDMIKRSI 323
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 1/251 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ +V FN ++ + + +++ EM G P+ +YS L++ C R +A
Sbjct: 217 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 276
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L +M +K + ++V +N +I F + G+ AE+ + +M ++ T+ LVNG
Sbjct: 277 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 336
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C +D A ++ M K P+ T LI C +RV + ++ + + GL
Sbjct: 337 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR-EMSHRGLVG 395
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI+GL +G + A KV +MV G P + YS +DG G +E A +
Sbjct: 396 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 455
Query: 482 KEMFENQVRQE 492
M +++++ +
Sbjct: 456 DYMQKSEIKLD 466
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 155/351 (44%), Gaps = 27/351 (7%)
Query: 140 KLKLFEVLV----KTYR-ECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLS 193
K+K F+V++ K R E + +++LI C C +I + ++ +M G
Sbjct: 59 KMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRR----SQISLALALLGKMMKLGYE 114
Query: 194 VKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNAL 253
+ T ++L+ GK + SDA A + + V+ + RP+ TF L
Sbjct: 115 PSIVTLSSLLNGYCHGKRI--------------SDAVALVDQMVE--MGYRPDTITFTTL 158
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ G + + + M + GC+P+ +Y V++ C+ A L +M +
Sbjct: 159 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI 218
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
E DVV +NTII C+ + A F+EM G+ + VT+ L++ C G A
Sbjct: 219 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 278
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ +DM K P T LI + + EA + L ++K + P +Y L+ G
Sbjct: 279 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA-EKLYDDMIKRSIDPDIFTYNSLVNGF 337
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
C ++++A ++ MV K P + Y+ I G+ K VE T L +EM
Sbjct: 338 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 388
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 137/306 (44%), Gaps = 31/306 (10%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
KL++ ++K R F ++ L+ C+ ++++ + ++S+ V T N
Sbjct: 313 KLYDDMIK--RSIDPDIFTYNSLVNGFCMH----DRLDKAKQMFEFMVSKDCFPDVVTYN 366
Query: 201 ALIWEVSRGKGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
LI + K V G E++RE+ GL D T+ L+ G +
Sbjct: 367 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTV------------------TYTTLIQGLF 408
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+G + + V+ +M G PD +YS+L+ C ++ +A ++++ M+ ++ D+
Sbjct: 409 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 468
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
Y T+I G C+ G++ + F + L GV+ + VT+ +++G C + A + M
Sbjct: 469 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 528
Query: 379 CRKGFEPEGSTIEVLI-GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
G P T LI L D + A I + R + F + S + L+ + +G
Sbjct: 529 KEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR---FVGDASTIGLVANMLHDG 585
Query: 438 KMEEAL 443
+++++
Sbjct: 586 RLDKSF 591
>gi|297838283|ref|XP_002887023.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332864|gb|EFH63282.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 539
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 217/482 (45%), Gaps = 41/482 (8%)
Query: 13 VSKPKPKPQLLS---QFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS-G 68
+ KP P+L+ FS+ + P+ Q LI ++ L +S W L + S
Sbjct: 14 IPPSKPSPKLIHGFFSFSSKTIPNPNKQQQILIDSISKSL---QSNDNWETLSTKFSSID 70
Query: 69 LTPTQFSQIALGLKNNPHLA---LRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPAR 125
L+ + I L N+P A L FF ++ H +H + SYA IHIL +ARL+ AR
Sbjct: 71 LSDSLIETILLRF-NSPETAKRALTFFHWSAHTRNLRHGIRSYAVTIHILVKARLLIDAR 129
Query: 126 DVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVR 185
+I +L + L + L+ TY S P VFDLL++C +++ +E ++ +
Sbjct: 130 ALIESSLLNS----SSDLVDSLLDTYVNSSSTPLVFDLLVQCYAKIR---YLELGFEVFK 182
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
L G S+ V T N LI ++ V + IY F +D R+ P
Sbjct: 183 RLCDCGFSLSVITLNTLIHFAAKSNRVDLVWRIYE--FAIDK--------------RIYP 226
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T ++ +EG ++V D+ + C P + L+ EE+R+ E+ L
Sbjct: 227 NETTIRIMISVLCKEGRLKEVVDLLDRIYGKRCLPSVIVNTSLVFRVLEEKRVEESMSLL 286
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ + KN+ DV+ Y+ ++ + G++ A F EM G +++ + V C
Sbjct: 287 KRLLMKNMVVDVIGYSIVVYAKTKKGDLECARNVFDEMIRRGFSANAFVYTAFVRVCCER 346
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLI---GELCDKRRVFEALDILKARVVKFGLFPT 422
GDV+ A + ++M G P T LI + + E +I+ AR GL P+
Sbjct: 347 GDVEEAERLMSEMEDSGVNPYEETFNFLIVGCARFGREEKGLEYCEIMVAR----GLMPS 402
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ ++K L E + A ++ + + KGF P YS I G+++ +++ A L
Sbjct: 403 CSAFNGMVKRLSEIDNVNRANEILTKSIDKGFVPDEHTYSHLIRGFVEGNSIDQALKLFY 462
Query: 483 EM 484
EM
Sbjct: 463 EM 464
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 8/173 (4%)
Query: 214 SGYEIYREVFGLDSDATAGIGKDVK-------RVVR-VRPNVHTFNALMVGFYREGAFEK 265
SG Y E F A G++ K V R + P+ FN ++ +
Sbjct: 362 SGVNPYEETFNFLIVGCARFGREEKGLEYCEIMVARGLMPSCSAFNGMVKRLSEIDNVNR 421
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
++ + G PD ++YS L+ F E + +A KL+ EM + + + ++I
Sbjct: 422 ANEILTKSIDKGFVPDEHTYSHLIRGFVEGNSIDQALKLFYEMEYRKISPGFEVFRSLIV 481
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
G C G++ E++ R M +E ++ +E ++N + + GD +A VYN+M
Sbjct: 482 GLCACGKVEAGEKYLRIMKRRLIEPNADIYEAMINAFQKIGDKTNADKVYNEM 534
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P TFN L+VG R G EK + M G P C +++ ++ E + A
Sbjct: 364 VNPYEETFNFLIVGCARFGREEKGLEYCEIMVARGLMPSCSAFNGMVKRLSEIDNVNRAN 423
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ + DK D Y+ +I GF E + +A + F EM + F L+ G
Sbjct: 424 EILTKSIDKGFVPDEHTYSHLIRGFVEGNSIDQALKLFYEMEYRKISPGFEVFRSLIVGL 483
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
C G V++ M R+ EP E +I
Sbjct: 484 CACGKVEAGEKYLRIMKRRLIEPNADIYEAMIN 516
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 83/206 (40%), Gaps = 34/206 (16%)
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
+ ++ ++ + +I + E F+ + G S +T L++ ++ VD +Y
Sbjct: 159 LVFDLLVQCYAKIRYLELGFEVFKRLCDCGFSLSVITLNTLIHFAAKSNRVDLVWRIYEF 218
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK-------------------------- 411
K P +TI ++I LC + R+ E +D+L
Sbjct: 219 AIDKRIYPNETTIRIMISVLCKEGRLKEVVDLLDRIYGKRCLPSVIVNTSLVFRVLEEKR 278
Query: 412 --------ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
R++ + Y ++ ++G +E A V EM+ +GF + +Y+A
Sbjct: 279 VEESMSLLKRLLMKNMVVDVIGYSIVVYAKTKKGDLECARNVFDEMIRRGFSANAFVYTA 338
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQV 489
F+ + G+VE A L EM ++ V
Sbjct: 339 FVRVCCERGDVEEAERLMSEMEDSGV 364
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 194/433 (44%), Gaps = 45/433 (10%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
AL F + +S C SL +Y +I+ A G A D+ + R +P + L
Sbjct: 29 ALEVFETMKSES-CVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTL 87
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIE-----------------KIETCVDIVRMLMSR 190
+ G+ LL + + KNI K E ++ +M+
Sbjct: 88 ISGLCSSGNTEGARKLLSE--MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAA 145
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSD---------ATAGIGK---- 235
G + V N ++ +R + E+Y+ + G D A IGK
Sbjct: 146 GCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDES 205
Query: 236 ------DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
R PNV TF+ L+ G R G EK +V+ M GC+P+ Y+Y+ L+
Sbjct: 206 LKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLI 265
Query: 290 AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-GLSGV 348
A C ++ +A +L+E+M + D VAYN++I G+C+ G M AE+ +REM G +G+
Sbjct: 266 AGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGL 325
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+ + VTF L++G+C+ G + A + +M KG + T +LI L ++ EAL+
Sbjct: 326 QPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALE 385
Query: 409 ILKA-RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+ K R KF L P S + + GLC+ G +++A V G P+ E + +
Sbjct: 386 VYKQMREKKFLLDPV--SCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSES 443
Query: 468 YMKEGNVEMATML 480
+K G VE A L
Sbjct: 444 LIKLGRVEDAQKL 456
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 172/414 (41%), Gaps = 45/414 (10%)
Query: 98 KSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSA 157
K+ C +Y ++ L++A ++ A +V ++S P L + VL+ + C +
Sbjct: 3 KAKCAIGGDAYDFVVQSLAKAGMLAQALEVFET-MKSESCVPSLVTYNVLINS--RCNAG 59
Query: 158 PF---------------------VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKV 196
F ++ LI N E + +R + ++ V
Sbjct: 60 EFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMR---DKNIAANV 116
Query: 197 STCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVG 256
T +++I + + Y++ E+ + P+V FN +M G
Sbjct: 117 FTYSSIIKSLVKEAKPEESYKVLEEMMAAGCN----------------PDVFAFNGVMQG 160
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM--RDKNVE 314
F R EK +V+ M G +PD SY +L+ + ++ E+ K+ EM R
Sbjct: 161 FARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYV 220
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
+V+ ++T+I G C GE+ +A E F M +G + + T+ L+ G CRA V A +
Sbjct: 221 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQAREL 280
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
+ M + P+ LI C + + EA + + GL PT ++ LI G C
Sbjct: 281 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC 340
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+ GK+ A ++ AEM KG Y I G + ++ A + K+M E +
Sbjct: 341 KLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKK 394
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 8/179 (4%)
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
AY+ ++ + G +A+A E F M S VT+ L+N C AG+ A+ ++ M
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71
Query: 379 CR-KGFEPEGSTIEVLIGELCDKRRVFEALDIL---KARVVKFGLFPTEKSYMFLIKGLC 434
R K EP+ T LI LC A +L + + + +F +Y +IK L
Sbjct: 72 KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVF----TYSSIIKSLV 127
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+E K EE+ KV EM+ G P + ++ + G+ + N+E A + + M E+ + ++
Sbjct: 128 KEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDN 186
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 37/251 (14%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M++ C +Y ++ + + +A +++E M+ ++ +V YN +I C GE
Sbjct: 1 MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60
Query: 333 MARAEEFFREMGLSG-VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+A + F+ M VE T+ L++G C +G+ + A + ++M K T
Sbjct: 61 FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120
Query: 392 VLIGELCDKRRVFEALDIL-----------------------------KAR-----VVKF 417
+I L + + E+ +L KAR +V+
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV--GKGFEPSLEIYSAFIDGYMKEGNVE 475
G P SY LI GL + GK++E+LK+ +EM G+ P++ +S I G + G +E
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELE 240
Query: 476 MATMLRKEMFE 486
A + M E
Sbjct: 241 KALEVFGSMLE 251
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 186/410 (45%), Gaps = 29/410 (7%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
+L SY T+IH L +++ A+ +I+V + +F + +T S +VF
Sbjct: 1 TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSG 60
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
LI LE + C R+ V TC ++ + + K + Y E+
Sbjct: 61 LITAYLESGFLRDAIECY---RLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 117
Query: 224 GLD----------------SDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFE 264
D J + V + +RP+V ++N LM G+ R G +
Sbjct: 118 ECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 177
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ + M G +PD Y+YSVL+ C+E + +A +L++EM K + + V + T+I
Sbjct: 178 EGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLI 237
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M KG +
Sbjct: 238 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLK 297
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P+ T LI C + + A + K R+++ E Y LI GLC EG+ +A K
Sbjct: 298 PDKITYTTLIDGCCKEGDLDSAFEHXK-RMIQENXRLDEVXYTALISGLCXEGRSVDAEK 356
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+ EM+ G +P Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 357 MLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM------QRDG 400
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ + EM+ G +PD +Y+ L+ C+E + A
Sbjct: 261 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAF 320
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N D V Y +I G C G AE+ REM G++ + T+ ++N +
Sbjct: 321 EHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEF 380
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ GDV + +M R G P T VL+
Sbjct: 381 CKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 412
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + + + +D + G+
Sbjct: 245 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL------IDEMSXKGL-- 296
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G +EG AFE + + E RL D Y+ L++
Sbjct: 297 --------KPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRL----DEVXYTALISG 344
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C E R +AEK+ EM ++ D Y II FC+ G++ + + +EM G S
Sbjct: 345 LCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 404
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 405 VVTYNVLMNG 414
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 188/402 (46%), Gaps = 23/402 (5%)
Query: 105 LSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLL 164
L SY T+IH L +++ A+ +I++ + +F +++T S +VF L
Sbjct: 1 LHSYCTMIHFLCTHQMLSEAKSLIQLVVSRKGKGSASVVFATILETKGTQRSDIYVFSGL 60
Query: 165 IKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG 224
I LE + C + R L V TC ++ + + + + Y E+
Sbjct: 61 ITAYLESGFLRDAIECYRLTR---EHKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEILE 117
Query: 225 LD----------------SDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFEK 265
D + + V + +RP+V ++N LM G+ R G ++
Sbjct: 118 CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDE 177
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
+ M G +PD Y+YSVL+ C+E +M +A +L++EM K + + V + T+I
Sbjct: 178 GFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLID 237
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
G C+ G + A E ++ M + +T+ L+ G C+ GD+ A + ++M KG +P
Sbjct: 238 GHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKP 297
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+ T LI C + + A K R+++ + + +Y LI GLC+EG+ +A K+
Sbjct: 298 DKFTYTTLIDGCCKEGDLDTAFKHRK-RMIQENIRLDDVAYTALISGLCQEGQSVDAEKM 356
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
EM+ G +P + Y+ I+ + K+G+V + L KEM N
Sbjct: 357 LREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRN 398
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 80/150 (53%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G + G ++ D+ EM+ G +PD ++Y+ L+ C+E + A K
Sbjct: 262 PDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKH 321
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C+ G+ AE+ REM G++ T+ ++N +C+
Sbjct: 322 RKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCK 381
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 382 KGDVWKGSKLLKEMQRNGHAPSVVTYNVLM 411
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 109/250 (43%), Gaps = 44/250 (17%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY-SYSVLMAVFCEERRMREAE 302
R +++ F+ L+ + G +E RL E + + + ++R +
Sbjct: 51 RSDIYVFSGLITAYLESGFLRDA----IECYRLTREHKLWVPFDTCRKMLEHLMKLRYFK 106
Query: 303 KLW---EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+W EE+ + + +N ++ FC+ G++ A+ F + G+ S V++ L+
Sbjct: 107 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 166
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
NGY R GD+D +GF LK+ ++ G+
Sbjct: 167 NGYIRLGDLD-----------EGFR-------------------------LKSAMLANGV 190
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI GLC+E KM++A ++ EM+ KG P+ ++ IDG+ K G V++A
Sbjct: 191 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAME 250
Query: 480 LRKEMFENQV 489
+ K M +
Sbjct: 251 IYKRMLSQSL 260
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ L + T N LI+ + + + +++ +D + G+
Sbjct: 244 RVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDL------IDEMSMKGL-- 295
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG + M + D +Y+ L++ C+E
Sbjct: 296 --------KPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQE 347
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ +AEK+ EM ++ D+ Y II FC+ G++ + + +EM +G S VT+
Sbjct: 348 GQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTY 407
Query: 356 EHLVNG 361
L+NG
Sbjct: 408 NVLMNG 413
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 139/246 (56%), Gaps = 1/246 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ P+V+TF+ L+ GF ++G ++ ++V M + +PD +YS LM +C + +A
Sbjct: 398 NIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKA 457
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
E ++ M + V +V +YN +I GFC+I + A + F+EM + +T+ L++G
Sbjct: 458 ESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDG 517
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C++G + A+ + ++M +G +P+ T ++ LC K V +A+ +L ++ G+ P
Sbjct: 518 LCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLL-TKLKGQGIRP 576
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y L+KGLC+ GK+E+A KV +++ KG+ + Y+ I G+ +G + A L
Sbjct: 577 DMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALL 636
Query: 482 KEMFEN 487
+M EN
Sbjct: 637 SKMEEN 642
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 129/242 (53%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+V T+++LM G+ K E ++ M+ G + SY++++ FC+ + + EA
Sbjct: 434 IKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAM 493
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL++EM K + DV+ Y+++I G C+ G ++ A E EM G + +T+ +++
Sbjct: 494 KLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDAL 553
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ VD AI + + +G P+ +T +L+ LC ++ +A + + +VK G
Sbjct: 554 CKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVK-GYNLD 612
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I+G C++G +EAL + ++M G P + Y I ++ +MA L +
Sbjct: 613 VYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLR 672
Query: 483 EM 484
EM
Sbjct: 673 EM 674
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 130/250 (52%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+V +N ++ G ++ D++ E PD ++Y+ L++ FC ++++A
Sbjct: 329 VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI 388
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ +M KN+ DV ++ ++ GFC+ G + A+ M ++ VT+ L++GY
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGY 448
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +V+ A ++N M +G + ++I C + V EA+ + K K +FP
Sbjct: 449 CLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHK-QIFPD 507
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI GLC+ G++ AL++ EM +G +P + Y++ +D K+ +V+ A L
Sbjct: 508 VITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLT 567
Query: 483 EMFENQVRQE 492
++ +R +
Sbjct: 568 KLKGQGIRPD 577
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 158/357 (44%), Gaps = 13/357 (3%)
Query: 145 EVLVKTYRECGSAPFVFDLL---------IKCCLEVKNIEKIETCVDIVRMLMS-RGLSV 194
+L+ ++ + G PF F +L +K C + KN+E + IV +L + L +
Sbjct: 149 NILINSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFL 208
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR--VRPNVHTFNA 252
K + L + K +I ++ + + L I ++++ P+ T
Sbjct: 209 KDFLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTT 268
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
+ GF +G + ++ +G D SY L+ C+ + A +L K
Sbjct: 269 FIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKL 328
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
V+ DVV YNTII G C+ + A + + E + T+ L++G+C G + AI
Sbjct: 329 VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI 388
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
++N M K P+ T +L+ C + EA ++L A ++K + P +Y L+ G
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVL-AMMMKQSIKPDVVTYSSLMDG 447
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
C ++ +A + M +G +++ Y+ I+G+ K V+ A L KEM Q+
Sbjct: 448 YCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQI 504
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
E D + T I GFC G++ +A F ++ G V++ L+NG C+ G+ +A+
Sbjct: 260 EPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALE 319
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ K +P+ +I +C + V +A D+ +V K +FP +Y LI G
Sbjct: 320 LLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSK-RIFPDVFTYNALISGF 378
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
C GK+++A+ + +M K P + +S +DG+ K+GN++ A + M + ++ +
Sbjct: 379 CIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 108/233 (46%), Gaps = 20/233 (8%)
Query: 168 CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDS 227
CL V + K E+ I + RG++ V + N +I + K V ++++E+
Sbjct: 449 CL-VNEVNKAES---IFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEM----- 499
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
++ P+V T+++L+ G + G ++ EM G +PD +Y+
Sbjct: 500 -----------HHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNS 548
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
++ C++ + +A L +++ + + D+ Y ++ G C+ G++ A + F ++ + G
Sbjct: 549 ILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKG 608
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
+ ++ G+C G D A+ + + M G P+ T E++I L +K
Sbjct: 609 YNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEK 661
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 69/140 (49%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P++ T+N+++ ++ +K + ++ G PD +Y++L+ C+ ++ +A K
Sbjct: 540 QPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARK 599
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++E++ K DV AY +I GFC+ G A +M +G + T+E ++
Sbjct: 600 VFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLF 659
Query: 364 RAGDVDSAILVYNDMCRKGF 383
+ D A + +M +G
Sbjct: 660 EKDENDMAEKLLREMIMRGL 679
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RP+++T+ L+ G + G E V+ ++ G D Y+Y+V++ FC++ EA
Sbjct: 574 IRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEAL 633
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
L +M + D Y II E E AE+ REM + G+
Sbjct: 634 ALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 133/245 (54%), Gaps = 1/245 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ +V+T+N+L+ G R G +++V M G PD +++++L+ C+E ++ EA+
Sbjct: 1151 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQ 1210
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ E MR K E D++ YNT++ G C +G++ A + F + G++ + ++ L+NGY
Sbjct: 1211 QILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGY 1270
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ +D A + +M KG +P T LIG LC RV A + + G F
Sbjct: 1271 CKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLF-VEMQTCGQFLK 1329
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ GLC+ G +EEA+ + + +P++E++S +DG + G +E A
Sbjct: 1330 LSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 1389
Query: 483 EMFEN 487
E+ +N
Sbjct: 1390 EISKN 1394
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 155/311 (49%), Gaps = 17/311 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++ + + RG+S V T N+LI +SR GL + T +
Sbjct: 1135 RLKEALEFFKEMEGRGISADVYTYNSLIHGLSRA--------------GLWKEVTWFLNL 1180
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
V R P+ TF L+ G +EG + + + M G EPD +Y+ LM C
Sbjct: 1181 MVDR--GFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLV 1238
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
++ +A KL+E + D+ ++ +V +YN +I G+C+ ++ A FF EM G++ S+VT+
Sbjct: 1239 GQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTY 1298
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+ C++G V +A ++ +M G + ST VL+ LC + EA+D+ ++ +
Sbjct: 1299 NTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQS-IK 1357
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K P + + L+ G+C GK+EEA K E+ G EP Y+ I+G +G +
Sbjct: 1358 KTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLS 1417
Query: 476 MATMLRKEMFE 486
A L +M E
Sbjct: 1418 EAVKLLWQMEE 1428
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 158/353 (44%), Gaps = 32/353 (9%)
Query: 140 KLKLFEVLVKTYR---ECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSV 194
KL + + YR + G P + ++LI CC ++ + + + RG
Sbjct: 958 KLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFG---VFGGFLKRGFEP 1014
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALM 254
T L+ V G+ +++ E+ G+ D K T+ L+
Sbjct: 1015 DAVTVTTLVKGVWMENGIPDAVQLFDEM------TKKGLLGDAK----------TYGILI 1058
Query: 255 VGF---YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
G + G K+ E + C+ D ++Y +++ C++ EA ++ EM
Sbjct: 1059 NGLCKARKTGLAIKLH----EKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGA 1114
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
+ DVV Y++++ G C G + A EFF+EM G+ + T+ L++G RAG
Sbjct: 1115 GILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEV 1174
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
N M +GF P+ T +LI LC + +V EA IL+ K G P +Y L+
Sbjct: 1175 TWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHK-GKEPDILTYNTLMN 1233
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
GLC G++E+A K+ + +G + ++ Y+ I+GY K+ ++ A +EM
Sbjct: 1234 GLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEM 1286
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 2/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T L+ G + E ++ EM + G D +Y +L+ C+ R+ A KL
Sbjct: 1014 PDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKL 1073
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+M+ N + DV Y II C+ G A + F EM +G+ V + L++G CR
Sbjct: 1074 HEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR 1132
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A+ + +M +G + T LI L + +++ + +V G P
Sbjct: 1133 FGRLKEALEFFKEMEGRGISADVYTYNSLIHGL-SRAGLWKEVTWFLNLMVDRGFSPDAF 1191
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI GLC+EGK+ EA ++ M KG EP + Y+ ++G G +E AT L + +
Sbjct: 1192 TFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 1251
Query: 485 FENQVR 490
+ ++
Sbjct: 1252 ADRGIK 1257
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 2/228 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P TFN L+ + G + V ++ ++ +G +PD Y+ ++L+ C R + +
Sbjct: 944 PCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGV 1003
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + E D V T++ G + A + F EM G+ + T+ L+NG C+
Sbjct: 1004 FGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCK 1063
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A AI ++ M + + + T ++I LC EALD+ + ++ G+ P
Sbjct: 1064 ARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDALCKDGMTTEALDMF-SEMIGAGILPDVV 1121
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
Y L+ GLC G+++EAL+ EM G+G + Y++ I G + G
Sbjct: 1122 VYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAG 1169
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+N ++ ++G + +R++ G++ T L++ C V V+
Sbjct: 948 TFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGF 1007
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG------ 432
++GFEP+ T+ L+ + + + +A+ + + K GL K+Y LI G
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFD-EMTKKGLLGDAKTYGILINGLCKARK 1066
Query: 433 ----------------------------LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
LC++G EAL + +EM+G G P + +YS+
Sbjct: 1067 TGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 1126
Query: 465 IDGYMKEGNVEMATMLRKEM 484
+DG + G ++ A KEM
Sbjct: 1127 MDGLCRFGRLKEALEFFKEM 1146
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 1/134 (0%)
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
TF HL+ + G + +Y + G +P+ T+ +LI C R +
Sbjct: 948 TFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILI-HCCCSLRAVGCGFGVFGG 1006
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+K G P + L+KG+ E + +A+++ EM KG + Y I+G K
Sbjct: 1007 FLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARK 1066
Query: 474 VEMATMLRKEMFEN 487
+A L ++M N
Sbjct: 1067 TGLAIKLHEKMKGN 1080
>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 211/469 (44%), Gaps = 60/469 (12%)
Query: 68 GLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDV 127
+T + ++ +N+P LAL F + K HS+ S +IH+L ++ A +
Sbjct: 4 NMTCSLVGRVICKFQNSPQLALEFHDWVLEKKSVLHSIESCCVVIHVLVNSKRYDDALFI 63
Query: 128 IRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRML 187
+ + P L++ + L+ +Y C S+P VFD L++ C + I E +++ L
Sbjct: 64 MGNLMNVNGISP-LEVLDALISSYDICKSSPAVFDALVRTCTQ---IGATEGAYEVITKL 119
Query: 188 MSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV-----------FGLDSDATAGIGKD 236
G V V N + + + V +++Y+E+ F L A G+
Sbjct: 120 QLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRL 179
Query: 237 VKRV--------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL-GC--EPDCYSY 285
V+ V + PNV TFN ++ G + GA + + +M + GC +PD +Y
Sbjct: 180 VEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTY 239
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ + FC+ + AE+ +EM K +E +V Y T++ G+ +G + A E+
Sbjct: 240 NSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVE 299
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G+ +SV + +++ GD++ A L+ +DM K P+ T ++I LC + E
Sbjct: 300 KGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNE 359
Query: 406 ALDILK----------------------------------ARVVKFGLFPTEKSYMFLIK 431
A L+ A + GL P ++ LI
Sbjct: 360 AFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLID 419
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
C++GK+E A++V +M+ G +P+L IY++ I+G+ KEG+ + A +L
Sbjct: 420 RHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILL 468
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 2/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +N+++ EG E + +M PD ++YS+++ C + EA K
Sbjct: 304 PNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKF 363
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + + ++ D ++N +I C +A A++ M + G+ VTF L++ +C+
Sbjct: 364 LQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCK 423
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G V++AI VY M + G +P +I K F+ +L + + GLF
Sbjct: 424 DGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFA-KEGSFDPAILLIDTLRRMGLFDV-V 481
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C GK+++A + +EM G S Y+ I+ K G+V A L K M
Sbjct: 482 TYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMM 541
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 2/196 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TF L+ ++G E V+ +M + G +P+ Y+ ++ F +E A L
Sbjct: 409 PDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILL 468
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +R + DVV YNT+I G+C G++ +A F EM SG+ +S VT+ L+N C+
Sbjct: 469 IDTLRRMGL-FDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCK 527
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG V A + M +G P+ T +LI K E +++ V+K G+ P +
Sbjct: 528 AGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLK-GVVPDRQ 586
Query: 425 SYMFLIKGLCEEGKME 440
+Y ++ L +E +E
Sbjct: 587 TYQTMVIPLLQEESVE 602
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 115/243 (47%), Gaps = 2/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ P+ T++ ++ G R G + + + D +S++V++ C + A
Sbjct: 336 RIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGA 395
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++L M + + DVV + T+I C+ G++ A + + +M +G + + + + ++NG
Sbjct: 396 KQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVING 455
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ + G D AIL+ + + R G + T LI C+ ++ +A + + + G+
Sbjct: 456 FAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALF-SEMRNSGILA 513
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ +Y LI LC+ G + +A ++ MV +G P Y+ I + K+ + E L
Sbjct: 514 SHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELH 573
Query: 482 KEM 484
M
Sbjct: 574 DYM 576
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 132/242 (54%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN++T+N L+ + R G FE+ ++ EM G + SY+ L+A C ++ +A
Sbjct: 104 VEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAA 163
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL + MR + ++ +N ++ G+ + G+M+ A FF +M +G + S+VT+ L+ G+
Sbjct: 164 KLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGF 223
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRA D+ A +DM +G EP T +LI + + +A +IL A + K GL
Sbjct: 224 CRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEIL-AGMEKAGLEVD 282
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L++ LC EG M++A K+ M KG EPS IY I GY +EG+ A L
Sbjct: 283 AHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIM 342
Query: 483 EM 484
EM
Sbjct: 343 EM 344
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ R RP++ TFN L+ G+ + G + +M G +P +Y++L+A FC
Sbjct: 167 DMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRA 226
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R M A + +M+++ +E V Y +I F M +A E M +G+E + T+
Sbjct: 227 RDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTY 286
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
LV C G++ A ++ M KG EP +++I + ++AL ++
Sbjct: 287 GVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQ 346
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
K GL P SY I+ LC++ K +EA + +MV G + S I A +D
Sbjct: 347 K-GLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQALLD 396
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 108/278 (38%), Gaps = 42/278 (15%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECG----SAPF--- 159
SY T+I L R + A ++ + +R+ P + F +LV Y + G + PF
Sbjct: 145 SYNTLIAGLCRHGKLWDAAKLLDM-MRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQ 203
Query: 160 -----------VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+++LI +++ + + ++ RGL T LI +R
Sbjct: 204 MKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK---ERGLEPTKVTYTILIDSFAR 260
Query: 209 GKGVISGYEIYR--EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
+ +EI E GL+ DA HT+ L+ EG +
Sbjct: 261 ENHMGKAFEILAGMEKAGLEVDA------------------HTYGVLVRALCMEGNMKDA 302
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
++ M G EP Y +++ + E +A KL EMR K + + +Y I
Sbjct: 303 RKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRV 362
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
C+ + AE +M +G+++S + L++ R
Sbjct: 363 LCKDDKCQEAEALLDDMVRAGLQTSESICQALLDAKAR 400
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 177/389 (45%), Gaps = 44/389 (11%)
Query: 105 LSSYATIIHILSRARLIGPARDVIRVALRS---PENDPKLKLFEVLVKTYRECGSAPFVF 161
LS+Y +++ L +AR + A ++R + P+N + L+ Y G
Sbjct: 251 LSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDN----WTYNSLIYGYSSTG------ 300
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
+ + V + + + S+G+ V T N+L+ + + + R+
Sbjct: 301 --------------QWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDA----RD 342
Query: 222 VFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
VF DS A G D+ ++ ++ G+ +G + +++ M G PD
Sbjct: 343 VF--DSMAMKGQKTDI----------FSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPD 390
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
+ ++VL+ + + + A ++ EMR++ VE DVV Y+T+I C IG+M A E F
Sbjct: 391 SHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFN 450
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
+M GV S T+ L+ G+C GD+ A + M KG P+ +I LC
Sbjct: 451 QMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLG 510
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
RV +A +I + GL P Y L+ G C GKME AL+V MV G +P++ +Y
Sbjct: 511 RVMDAQNIFDF-TISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVY 569
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQVR 490
++GY K G ++ L +E+ ++
Sbjct: 570 GTLVNGYCKVGRIDEGLSLFREILHKGIK 598
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 181/383 (47%), Gaps = 27/383 (7%)
Query: 98 KSLCKHSLSSYATIIHILSRARLIGPARDVIR--VALRSPENDPKLKLFEVLVKTYRECG 155
+ LC+ ++ A I +L R +G DV + L+S +D K + L++ E G
Sbjct: 151 RGLCEAKRTAEALDI-LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGG 209
Query: 156 SA----PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
+ ++ +I + ++ K D+ ++ RG+S +ST N ++ + + +
Sbjct: 210 AVCLPNAVAYNTVIDGFFKEGDVNK---ACDLFNEMVQRGISPDLSTYNCVVNALCKARA 266
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
+ I R++ +D V P+ T+N+L+ G+ G +++ V
Sbjct: 267 MDKAEAILRQM--VDKG--------------VLPDNWTYNSLIYGYSSTGQWKEAVRVSK 310
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
+M G PD + + LMA C+ ++++A +++ M K + D+ +Y ++ G+ G
Sbjct: 311 KMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKG 370
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ E F M G+ S F L+ Y + G +D A +++N+M +G EP+ T
Sbjct: 371 CLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYS 430
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+I LC ++ +A++ +++ G+ P+ +Y FLI+G C G + +A + +M+
Sbjct: 431 TVIAALCRIGKMDDAVEKFN-QMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMN 489
Query: 452 KGFEPSLEIYSAFIDGYMKEGNV 474
KG P + ++ I+ K G V
Sbjct: 490 KGMRPDIGCFNFIINNLCKLGRV 512
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 36/285 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +N ++ GF++EG K D++ EM + G PD +Y+ ++ C+ R M +AE +
Sbjct: 214 PNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAI 273
Query: 305 WEEMRDKNVEHDVVAYNTIIGGF-----------------------------------CE 329
+M DK V D YN++I G+ C+
Sbjct: 274 LRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCK 333
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G++ A + F M + G ++ +++ ++NGY G + ++N M G P+
Sbjct: 334 HGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHI 393
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
VLI K + + I+ + + G+ P +Y +I LC GKM++A++ +M
Sbjct: 394 FNVLIKAYA-KCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQM 452
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+ +G PS+ Y I G+ G++ A L +M +R + G
Sbjct: 453 IDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIG 497
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 156/373 (41%), Gaps = 70/373 (18%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
P +F VL+K Y +CG ++ I + +G+ V T
Sbjct: 389 PDSHIFNVLIKAYAKCG--------------------MLDRATIIFNEMREQGVEPDVVT 428
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
+ +I + R G DA + + + V P++ T++ L+ GF
Sbjct: 429 YSTVIAALCR--------------IGKMDDAVEKFNQMIDQ--GVAPSISTYHFLIQGFC 472
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
G K +D+ ++M G PD ++ ++ C+ R+ +A+ +++ + +V+
Sbjct: 473 THGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVM 532
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
YNT++ G+C +G+M A F M +G++ + V + LVNGYC+ G +D + ++ ++
Sbjct: 533 VYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREI 592
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEA-------------LDILKARVVKFGLFPT--- 422
KG +P + +++ L R A +D +V GLF
Sbjct: 593 LHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCS 652
Query: 423 -EKSYMF-----------------LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
E +F +I G+ + ++EEA + A + G PS+ YS
Sbjct: 653 DEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIM 712
Query: 465 IDGYMKEGNVEMA 477
+ +KEG VE A
Sbjct: 713 MTNLIKEGLVEEA 725
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 17/274 (6%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
D+V +M++G+ + N +I + + V+ I+ D T IG
Sbjct: 482 DLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIF--------DFTISIG------- 526
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ PNV +N LM G+ G E V+ M G +P+ Y L+ +C+ R+ E
Sbjct: 527 -LHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEG 585
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L+ E+ K ++ YN I+ G + G A+ F EM SG+ T+ ++ G
Sbjct: 586 LSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGG 645
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ D AIL++ ++ + + +T+ ++I + RRV EA D+ A + + GL P
Sbjct: 646 LFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLF-ASISRSGLVP 704
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
+ +Y ++ L +EG +EEA + + M G E
Sbjct: 705 SVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCE 738
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 100/245 (40%), Gaps = 39/245 (15%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA- 301
+ P +HT+ LM R + + ++ + G D S L+ CE +R EA
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE--SSSVTFEHLV 359
+ L M DV +Y ++ C + +A+E R M G ++V + ++
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVI 223
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+G+ + GDV+ A ++N+M ++G P+ ST
Sbjct: 224 DGFFKEGDVNKACDLFNEMVQRGISPDLST------------------------------ 253
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
Y ++ LC+ M++A + +MV KG P Y++ I GY G + A
Sbjct: 254 ------YNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVR 307
Query: 480 LRKEM 484
+ K+M
Sbjct: 308 VSKKM 312
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ K+E + + +++S G+ V L+ + + G ++RE+ +
Sbjct: 544 VGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREI----------L 593
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
K +K P+ +N ++ G ++ G + + EM G D Y+YS+++
Sbjct: 594 HKGIK------PSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLF 647
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ EA L++E+ NV+ D+ N +I G +I + A++ F + SG+ S V
Sbjct: 648 KNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVV 707
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFE-PEGSTIEVLIGELCDKRRVFEA 406
T+ ++ + G V+ A +++ M G E P + ++ EL +KR + A
Sbjct: 708 TYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRA 761
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ L++ RA + + + + G + I L+ LC+ +R EALDIL R
Sbjct: 110 TYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHR 169
Query: 414 VVKFGLFPTEKSYMFLIKGLCEE---GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ G P SY ++K LC + G+ +E L++ AE G P+ Y+ IDG+ K
Sbjct: 170 MPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEG-GAVCLPNAVAYNTVIDGFFK 228
Query: 471 EGNVEMATMLRKEMFENQVRQE 492
EG+V A L EM + + +
Sbjct: 229 EGDVNKACDLFNEMVQRGISPD 250
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI-LVYNDMCRKGFEPEGSTIEVLIGEL 397
FF ++ +G+ ++ +L+ G C A A+ ++ + M G P+ + +++ L
Sbjct: 130 FFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSL 189
Query: 398 CDKRRVFEALDILKARVVKFGL-FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
C R+ +A ++L+ + P +Y +I G +EG + +A + EMV +G P
Sbjct: 190 CSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISP 249
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
L Y+ ++ K ++ A + ++M + V ++
Sbjct: 250 DLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDN 286
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 142/251 (56%), Gaps = 2/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV+T+N L+ G E+ V +M GC P+ +Y+ L+A FC + AE
Sbjct: 148 VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAE 207
Query: 303 KLWEEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++ MR++ N + ++V +N+++ G C+ G M A + F EM G+ V++ L++G
Sbjct: 208 RVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSG 267
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC+ G + ++ V+++M ++G P+ T LI C + +A+ ++ A++ + GL
Sbjct: 268 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALV-AQMRERGLRM 326
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
E ++ LI G C++G +++AL EM G +PS+ Y+A I+GY K G +++A L
Sbjct: 327 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 386
Query: 482 KEMFENQVRQE 492
+EM +V+ +
Sbjct: 387 REMEAKRVKPD 397
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 134/242 (55%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TF +L+ + G E+ + +M G + +++ L+ FC++ + +A
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EEMR ++ VV YN +I G+C++G M A E REM V+ VT+ +++GYC+
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G++DSA + M +KG P+ T LI LC+++R+ +A ++ + +++ G+ P E
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE-NMLQLGVQPDEF 469
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C+EG +E+AL + EM+ KG P + YS I+G K + A L ++
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529
Query: 485 FE 486
+
Sbjct: 530 YH 531
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 180/404 (44%), Gaps = 60/404 (14%)
Query: 123 PARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKC-CLEVKNIEKIET 179
PA + + +AL +D L + + G AP + +++L++ C ++E
Sbjct: 119 PAYNAVLLAL----SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCAR----GRLEE 170
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
V +V + G + T N L+ R G + G E R V + + A
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRA-GELDGAE--RVVSLMREEGNA-------- 219
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
+PN+ TFN+++ G + G E V+ EM R G PD SY+ L++ +C+ +
Sbjct: 220 ----KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH 275
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
E+ ++ EM + + DVV + ++I C+ G + +A +M G+ + VTF L+
Sbjct: 276 ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 335
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---------- 409
+G+C+ G +D A+L +M + G +P LI C R+ A ++
Sbjct: 336 DGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK 395
Query: 410 ------------------------LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
L +++K G+ P +Y LI+GLCEE ++ +A ++
Sbjct: 396 PDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 455
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
M+ G +P Y+ IDG+ KEGNVE A L EM V
Sbjct: 456 FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 499
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 161/342 (47%), Gaps = 33/342 (9%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
F LI + N+E+ V +V + RGL + T ALI + KG +
Sbjct: 295 TFTSLIHATCKAGNLEQ---AVALVAQMRERGLRMNEVTFTALIDGFCK-KGFLD----- 345
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
DA + + R ++P+V +NAL+ G+ + G + ++ EM +
Sbjct: 346 --------DALLAV--EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK 395
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +YS +++ +C+ + A +L ++M K V D + Y+++I G CE + A E
Sbjct: 396 PDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 455
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F M GV+ T+ L++G+C+ G+V+ A+ ++++M RKG P+ T VLI L
Sbjct: 456 FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSK 515
Query: 400 KRRVFEA-------------LDILKARVVKFGLFPTE-KSYMFLIKGLCEEGKMEEALKV 445
R EA D +K + E KS + L+KG C +G M+EA KV
Sbjct: 516 SARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKV 575
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
M+ + ++ +YS I G+ + GNV A K+M +
Sbjct: 576 YQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRS 617
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 112/252 (44%), Gaps = 42/252 (16%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V +NA+++ + + M R G P+ Y+Y++L+ C R+ EA +
Sbjct: 116 PSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE---EFFREMGLSGVESSSVTFEHLVNG 361
+MR + V YNT++ FC GE+ AE RE G + + VTF +VNG
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG--NAKPNLVTFNSMVNG 232
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+AG ++ A V+++M R+ GL P
Sbjct: 233 LCKAGRMEGARKVFDEMVRE------------------------------------GLAP 256
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
SY L+ G C+ G + E+L V +EM +G P + +++ I K GN+E A L
Sbjct: 257 DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALV 316
Query: 482 KEMFENQVRQED 493
+M E +R +
Sbjct: 317 AQMRERGLRMNE 328
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 16/230 (6%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+ T+ L+ G +EG EK + EM R G PD +YSVL+ + R +EA
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523
Query: 303 KLWEEMRDKNVEHDVVAYNTI---------------IGGFCEIGEMARAEEFFREMGLSG 347
+L ++ ++ D + Y+ + + GFC G M A++ ++ M
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ + L++G+CR G+V A+ + M R GF P ++ L+ L ++ V EA
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+ ++ + L E S LI +EG ++ + V M G PS
Sbjct: 644 NAIQDLLTCCPLADAEASKA-LIDLNRKEGNVDALIDVLCGMARDGLLPS 692
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 201/460 (43%), Gaps = 70/460 (15%)
Query: 58 WNHLLS-LCRSGL----------------TPTQFSQIAL--GL--KNNPHLALRFFSFTQ 96
+N LLS LCR+GL P +FS L GL +AL+ F
Sbjct: 234 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 293
Query: 97 HKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGS 156
+ C + +Y+T+I L +A + D KLFE + + E
Sbjct: 294 NGD-CPPDVVAYSTLIAGLCKAGRL----------------DEACKLFEKMRENSCEPDV 336
Query: 157 APF--VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVIS 214
F + D L K ++++ ++ + R + V T ++LI + + V
Sbjct: 337 VTFTALMDGLCKG-------DRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRD 389
Query: 215 GYEIYREVFGLDSDATAGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
E+++ + +VR + PNV T+N+L+ GF + + EM
Sbjct: 390 AQEVFK-----------------RMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 432
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
GC PD +Y+ L+ C+ R EA +L+ +M+ K DV+ Y+ +IGGFC++ +
Sbjct: 433 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERI 492
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
A F +M V VTF LV GYC AG VD A + +M P+ T L
Sbjct: 493 DMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL 552
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ C R+ EA +LK R+ K G P +Y LI C GK A ++ EMVG G
Sbjct: 553 VDGFCKVGRMVEARRVLK-RMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNG 611
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+P++ Y + I G+ G++E A +++ E R E+
Sbjct: 612 VQPNVITYRSLIGGFCGTGDLEEA----RKILERLERDEN 647
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 177/361 (49%), Gaps = 27/361 (7%)
Query: 146 VLVKTYRECGSAPFVFD---LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
+L+K +E G AP V ++ C + K ++T + R ++ G + T N L
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTK----VDTAYKLFRQMVENGCMPNLVTYNTL 237
Query: 203 IWEVSRGKGVISGYEIYREVF--GLDSDA------TAGIGKDVKRVVRVR---------- 244
+ + R + YE+ E+ GL D AG+ K K + ++
Sbjct: 238 LSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDC 297
Query: 245 -PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
P+V ++ L+ G + G ++ ++ +M CEPD +++ LM C+ R++EA++
Sbjct: 298 PPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 357
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ E M D+N +V+ Y+++I G C+ G++ A+E F+ M + G+E + VT+ L++G+C
Sbjct: 358 VLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 417
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
VDSA+L+ +M G P+ T LI LC R EA + KF P
Sbjct: 418 MTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF-CNPDV 476
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI G C+ +++ A + +M+ + P + +S ++GY G V+ A L +E
Sbjct: 477 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 536
Query: 484 M 484
M
Sbjct: 537 M 537
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 130/248 (52%), Gaps = 3/248 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V TF+ L+ G+ G + E + EM C PD Y+Y+ L+ FC+ RM EA
Sbjct: 507 VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEAR 566
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ + M + + +VV Y +I FC G+ A EM +GV+ + +T+ L+ G+
Sbjct: 567 RVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGF 626
Query: 363 CRAGDVDSAILVYNDMCR-KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C GD++ A + + R + + + V++ LC R+ AL++L+A + + G P
Sbjct: 627 CGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEA-IKQSGTPP 685
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEM-VGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
Y+ LI+GLC+ ++ +A++V EM + + P+ E Y A I +EG E A L
Sbjct: 686 RHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANAL 745
Query: 481 RKEMFENQ 488
E+ N+
Sbjct: 746 ADELLGNK 753
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 180/402 (44%), Gaps = 41/402 (10%)
Query: 83 NNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLK 142
++P ALRFF + + H++ +Y + L RAR I +++ P P +
Sbjct: 2 SDPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGW-PPGITPNVF 60
Query: 143 LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
+ V+++ + G L K C +++ + G + N +
Sbjct: 61 TYAVVIQGLCKSGD-------LDKAC-------------ELLEEMRESGPVPDAAIYNFV 100
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
I + + + + +R + NV T+ ++ G +
Sbjct: 101 IHALCKARNTAKALDYFRSM-------------------ECEKNVITWTIMIDGLCKANR 141
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
+ + +M + G P+ ++Y+VL+ FC+ ++ A L +EM++ + +VV Y+T
Sbjct: 142 LPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYST 201
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I GFC ++ A + FR+M +G + VT+ L++G CR G +D A + ++M +G
Sbjct: 202 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 261
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+P+ + + L+ LC ++ AL + + P +Y LI GLC+ G+++EA
Sbjct: 262 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDN-SNGDCPPDVVAYSTLIAGLCKAGRLDEA 320
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
K+ +M EP + ++A +DG K ++ A + + M
Sbjct: 321 CKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 362
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 120/247 (48%), Gaps = 4/247 (1%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV+T+N L R ++ + G P+ ++Y+V++ C+ + +A +L
Sbjct: 23 NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EEMR+ D YN +I C+ A+A ++FR M E + +T+ +++G C+A
Sbjct: 83 EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIMIDGLCKA 139
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+ A + M +KG P T VLI C +V A +LK + + GL P +
Sbjct: 140 NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLK-EMKESGLAPNVVT 198
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I G C + K++ A K+ +MV G P+L Y+ + G + G ++ A L EM
Sbjct: 199 YSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMR 258
Query: 486 ENQVRQE 492
E ++ +
Sbjct: 259 ERGLQPD 265
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 116/230 (50%), Gaps = 7/230 (3%)
Query: 230 TAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
AG+ D +R++ P+V+T+ +L+ GF + G + V MA+ GC+P+
Sbjct: 523 NAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVV 582
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+Y+ L+ FC + A +L EEM V+ +V+ Y ++IGGFC G++ A + +
Sbjct: 583 TYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERL 642
Query: 344 GLS-GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
++ + +++G CR G + +A+ + + + G P LI LC +
Sbjct: 643 ERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKE 702
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
+ +A+++L+ + P ++Y +I+ L EG+ EEA + E++G
Sbjct: 703 LGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLGN 752
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 6/212 (2%)
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G + + Y+Y+ L RR+ E + + + +V Y +I G C+ G++ +A
Sbjct: 19 GFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKA 78
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM-CRKGFEPEGSTIEVLIG 395
E EM SG + + +++ C+A + A+ + M C K T ++I
Sbjct: 79 CELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNV----ITWTIMID 134
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
LC R+ EA A++ K G P E +Y LI G C+ K+ A + EM G
Sbjct: 135 GLCKANRLPEATTYF-AKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLA 193
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
P++ YS I G+ ++ V+ A L ++M EN
Sbjct: 194 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVEN 225
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 127/242 (52%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P +N ++ GF +EG +V+ EM +G P +Y+ L+ FC+ + A KL
Sbjct: 387 PTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKL 446
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M+ K ++ D+ AY T+I GFC+ +M A E E+ +G+ + + ++ G+
Sbjct: 447 LNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKN 506
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+V+ AI +Y M +G + T LI L R+ A DI + K G+ P ++
Sbjct: 507 MNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSK-GILPDDR 565
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI GLC +G+ E A K+ +M GK PS+ IY+ I G+ KEGN++ A L EM
Sbjct: 566 AHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEM 625
Query: 485 FE 486
+
Sbjct: 626 LD 627
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 147/307 (47%), Gaps = 17/307 (5%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++++G+S V + N +I R + + ++Y+E+ LD+ T PN
Sbjct: 275 VIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM--LDNGFT--------------PN 318
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
TF LM G++++G E ++ M P + +++ C+ R E L+
Sbjct: 319 AVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFN 378
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+ + + YNTII GF + G + A +REM G+ S+VT+ L++G+C+
Sbjct: 379 KFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGN 438
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++D A+ + NDM RKG + + LI C +R + A ++L + GL P Y
Sbjct: 439 NIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLN-ELRGAGLSPNRFIY 497
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+I G +EEA+ + +MV +G L+ Y++ IDG +K G + A+ + EM
Sbjct: 498 NSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLS 557
Query: 487 NQVRQED 493
+ +D
Sbjct: 558 KGILPDD 564
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 158/380 (41%), Gaps = 66/380 (17%)
Query: 146 VLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
VLV E G P + +LI C + NIEK + + ++G+ V + N+
Sbjct: 166 VLVNEISESGLVPNKVTYSVLIDGCCKNGNIEK---AFEFYSEMKTKGIRSSVYSLNS-- 220
Query: 204 WEVSRGKGVISGY---EIYREVFGLDSDAT-AGIGKDVKRVVRVRPNVHTFNALMVGFYR 259
++ GY + ++ F + +DA +G+ NV TFN L+ +
Sbjct: 221 --------ILEGYLKCQSWQNAFTMFNDALESGLA-----------NVFTFNTLLSWLCK 261
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
EG + ++W E+ G P+ SY+ ++ C + + A K+++EM D + V
Sbjct: 262 EGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVT 321
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA-------------- 365
+ ++ G+ + G++ A F M + + + T ++ G C+A
Sbjct: 322 FTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFV 381
Query: 366 ---------------------GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G+++ A VY +MC G P T LI C +
Sbjct: 382 SQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNID 441
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
AL +L K GL K+Y LI G C+ M+ A ++ E+ G G P+ IY++
Sbjct: 442 LALKLLNDMKRK-GLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSM 500
Query: 465 IDGYMKEGNVEMATMLRKEM 484
I G+ NVE A L K+M
Sbjct: 501 ITGFKNMNNVEEAIDLYKKM 520
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 117/234 (50%), Gaps = 2/234 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V + P+ T+ +L+ GF + + + +M R G + D +Y L+ FC+ R M+
Sbjct: 418 VGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKS 477
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +L E+R + + YN++I GF + + A + +++M G+ T+ L++
Sbjct: 478 AHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLID 537
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G ++G + A ++ +M KG P+ VLI LC+K + A IL+ K +
Sbjct: 538 GLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGK-NMI 596
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK-EGN 473
P+ Y LI G +EG ++EA ++ EM+ +G P Y ++G K +GN
Sbjct: 597 PSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDGN 650
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 2/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P TF +++ +EG + + +M G + + LM +C + +R A L
Sbjct: 108 PPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVL 167
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+ + + + V Y+ +I G C+ G + +A EF+ EM G+ SS + ++ GY +
Sbjct: 168 VNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLK 227
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+A ++ND G T L+ LC + ++ EA ++ + K G+ P
Sbjct: 228 CQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAK-GISPNVV 285
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
SY +I G C + + A KV EM+ GF P+ ++ +DGY K+G++E A + M
Sbjct: 286 SYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM 345
Query: 485 FENQVRQED 493
+ + D
Sbjct: 346 KDANILPTD 354
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 1/228 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ N L+ R+ + ++ +M +G DC++ V++ +E + EAE
Sbjct: 1 MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + + + + VE D AY+ + C A REM +G TF ++
Sbjct: 61 QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G+V A+ + +DM G + L+ C + + AL +L + + GL P
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSAL-VLVNEISESGLVPN 179
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ +Y LI G C+ G +E+A + +EM KG S+ ++ ++GY+K
Sbjct: 180 KVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLK 227
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 116/281 (41%), Gaps = 33/281 (11%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
+V V + T + ++ +EG + E +++ G E D +YS+ + + C +
Sbjct: 33 LVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSG 92
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
A L EMR + ++I + G +A A +M G + L+
Sbjct: 93 YALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLM 152
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK---RRVFEALDILKARVVK 416
GYC G++ SA+++ N++ G P T VLI C + FE +K + ++
Sbjct: 153 KGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIR 212
Query: 417 FGLFPTEK------------------------------SYMFLIKGLCEEGKMEEALKVQ 446
++ ++ L+ LC+EGKM EA +
Sbjct: 213 SSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLW 272
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
E++ KG P++ Y+ I G+ ++ N+ A + KEM +N
Sbjct: 273 DEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDN 313
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A E +M L GV T ++ + G++ A + +G E + + +
Sbjct: 24 ARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVH 83
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
LC K AL +L+ + G P E ++ +I +EG + EAL+++ +MV G
Sbjct: 84 LLCLKPNSGYALSLLR-EMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKS 142
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+L + ++ + GY +GN+ A +L E+ E
Sbjct: 143 MNLAVATSLMKGYCMQGNLRSALVLVNEISE 173
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 136/249 (54%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N+++ GF +EG + V+ EM G P+ +Y+ L+ FC+ R+ A K
Sbjct: 607 PSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKT 666
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EMR+K +E DV AY+ +I GFC+ +M A++ F E+ G+ + + + +++G+
Sbjct: 667 RDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRD 726
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
++++A++ Y M + T LI L + R+ A D+ + K G+ P
Sbjct: 727 LNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSK-GIVPDII 785
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ L+ GLC +G++E A K+ EM K PS+ IY+ I GY +EGN++ A L EM
Sbjct: 786 TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM 845
Query: 485 FENQVRQED 493
+ + +D
Sbjct: 846 LDRGLVPDD 854
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 172/364 (47%), Gaps = 25/364 (6%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAP-FVFDLLIKCCLEVKNIEKIETCVDIVR 185
++R L++P + KLF+ V +CG A F +++++ + K++ ++
Sbjct: 441 LLRGYLKAPLWEEASKLFDEAV----DCGVANIFTYNIMMSWLCKGG---KMDEACSLLD 493
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
++++G+ V + N +I R + ++ ++ D ++P
Sbjct: 494 NMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD----------------LKP 537
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV T++ L+ G +++G EK D++ +M L P ++++ ++ C+ +M EA
Sbjct: 538 NVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKL 597
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ ++ + YN+I+ GF + G + A +REM GV + VT+ L+NG+C++
Sbjct: 598 KNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKS 657
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+D A+ ++M KG E + + LI C KRR E+ L +++ GL P
Sbjct: 658 NRIDLALKTRDEMREKGLELDVTAYSALIDGFC-KRRDMESAQDLFFELLEVGLSPNRIV 716
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I G + ME AL +M+ L Y+ IDG +KEG + A+ L EM
Sbjct: 717 YNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEML 776
Query: 486 ENQV 489
+
Sbjct: 777 SKGI 780
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 151/337 (44%), Gaps = 26/337 (7%)
Query: 136 ENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
+++ L LF+ ++ F F+ +I +V + + D ++ + G
Sbjct: 554 DSEKALDLFDQMLSL--NIAPTDFTFNTIINGLCKVGQMSEAR---DKLKNFLEEGFIPS 608
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATAGIGKDVKRVVRVRPNVHTFNAL 253
T N+++ + + S +YRE+ FG V PNV T+ +L
Sbjct: 609 CMTYNSIVDGFIKEGNIDSALAVYREMCEFG------------------VSPNVVTYTSL 650
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ GF + + EM G E D +YS L+ FC+ R M A+ L+ E+ + +
Sbjct: 651 INGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 710
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
+ + YN++I GF ++ M A ++++M + T+ L++G + G + A
Sbjct: 711 SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASD 770
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+Y +M KG P+ T VL+ LC+K ++ A IL+ K + P+ Y LI G
Sbjct: 771 LYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRK-NMTPSVLIYNTLIAGY 829
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
EG ++EA + EM+ +G P Y I+G K
Sbjct: 830 FREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 866
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 119/544 (21%), Positives = 217/544 (39%), Gaps = 89/544 (16%)
Query: 16 PKPK---PQLLS---QFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLS--LCRS 67
P PK P+ +S F +SS+P S + + T S + + NH++ LC
Sbjct: 54 PNPKANFPEKISPESSFPGNSSSPYPRYSQDTVPT--SQIHQETTPLSQNHVIDALLCHV 111
Query: 68 GLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRA-RLIGPARD 126
N+P ALR+F + + + +Y ++HIL R+ G AR
Sbjct: 112 ---------------NDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARK 156
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGS------APFVFDLLIKCCLEVKNIEKIETC 180
++ + S ++DP +F V C VF+ L+ + IE C
Sbjct: 157 LLNRYV-SGDSDPSPVVF---VDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDC 212
Query: 181 V--------------------------------DIVRMLMSRGLSVKVSTCNALIWEVSR 208
D+ ++ RG+ T + ++ +
Sbjct: 213 FNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLK 272
Query: 209 GKGVISGYEIYREV--FGLDSDATA--------------GIGKDVKRVVRVR---PNVHT 249
V E +RE G+ DA A +G ++ ++ R P+ T
Sbjct: 273 EGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEAT 332
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F +++V +G + + EM G + + LM +C + + A L+ ++
Sbjct: 333 FTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKIT 392
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ + + V Y+ +I G C G + +A E + +M L+G+ S L+ GY +A +
Sbjct: 393 EDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWE 452
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A ++++ G T +++ LC ++ EA +L +V G+ P SY +
Sbjct: 453 EASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLD-NMVNQGMVPNVVSYNDM 510
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I G C +G M+ A V ++M+ + +P++ YS IDG K+G+ E A L +M +
Sbjct: 511 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 570
Query: 490 RQED 493
D
Sbjct: 571 APTD 574
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 196/425 (46%), Gaps = 31/425 (7%)
Query: 91 FFSF--TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ + S +H+L SY T+IH + ++ A+ +I+V + +F ++
Sbjct: 3 FFTWLSSPANSTFRHTLXSYCTMIHFVCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIL 62
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+T S +VF LI LE + C + R + TC ++ + +
Sbjct: 63 ETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTR---EHKFWLPFDTCRKVLEHLMK 119
Query: 209 GKGVISGYEIYREVFGLDSDAT----------------AGIGKDVKRVVR---VRPNVHT 249
K + Y E A+ + + V + +RP+V +
Sbjct: 120 LKYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N LM G+ R G ++ + M G PD Y+YSVL+ C+E +M A +L++EM
Sbjct: 180 YNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEML 239
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + + V + T+I G C+ G + A E +++M + +T+ L+ G C+ GD++
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLN 299
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + ++M KG +P+ T LI C + + A + K R+++ + + +Y L
Sbjct: 300 QAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRK-RMIQENIRLDDVAYTAL 358
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I GLC+EG+ +A K+ EM+ G +P Y+ I+ K+G+V + L KEM
Sbjct: 359 ISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEM----- 413
Query: 490 RQEDG 494
Q DG
Sbjct: 414 -QXDG 417
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G + D+ EM+ G +PD +Y+ L+ C+E + A +
Sbjct: 280 PDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEH 339
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C+ G AE+ REM G++ + T+ ++N C+
Sbjct: 340 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCK 399
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M G P T VL+
Sbjct: 400 KGDVGKGSKLLKEMQXDGHAPSVVTYNVLM 429
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ L + T N LI+ + + + +++ +D + G+
Sbjct: 262 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDL------IDEMSMKGL-- 313
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 314 --------KPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL----DDVAYTALISG 361
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM ++ D Y II C+ G++ + + +EM G S
Sbjct: 362 LCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPS 421
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 422 VVTYNVLMNG 431
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 149/311 (47%), Gaps = 17/311 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+IE V I+ ++SR S T NA+I + + V EI R + + GI
Sbjct: 358 EIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL------TSKGI-- 409
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
P+V TFN+L+ G + D++ EM GC PD ++Y++L+ C
Sbjct: 410 --------LPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSS 461
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R++ EA L +EM +VV YNT+I GFC+ + AEE F EM L GV SVT+
Sbjct: 462 RKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTY 521
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C++ V+ A + + M +G P+ T L+ C + +A DI++ +
Sbjct: 522 NTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQT-MT 580
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G P +Y LI GLC+ G+++ A ++ + KG + Y+ I K
Sbjct: 581 SSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTH 640
Query: 476 MATMLRKEMFE 486
A L +EM +
Sbjct: 641 EAMRLFREMLD 651
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 114/240 (47%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ TF +M G+ G + + +M GC + +VL+ FC++ R+ +A
Sbjct: 236 PDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSF 295
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E + D YNT++ G C+IG A E M L G++ T+ L++G C+
Sbjct: 296 IQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCK 355
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+++ A+ + + M + P T +I LC + RV EA +I + K G+ P
Sbjct: 356 LGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSK-GILPDVC 414
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI+GLC + A+ + EM GKG P Y+ ID +E A L KEM
Sbjct: 415 TFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM 474
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 122/249 (48%), Gaps = 1/249 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RP+ T+N L+ G + G + +V M G +PD Y+Y+ L++ C+ + EA K
Sbjct: 305 RPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVK 364
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ ++M ++ + V YN II C+ + A E R + G+ TF L+ G C
Sbjct: 365 ILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLC 424
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ + SA+ ++ +M KG P+ T +LI LC R++ EAL++LK + G
Sbjct: 425 LSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELN-GCARNV 483
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
Y LI G C+ ++EEA ++ EM +G Y+ IDG K VE A L +
Sbjct: 484 VIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQ 543
Query: 484 MFENQVRQE 492
M +R +
Sbjct: 544 MIMEGLRPD 552
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 100/249 (40%), Gaps = 37/249 (14%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + ++ + G+FE + V EM GCE D + + + + + E +
Sbjct: 95 PSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGI 154
Query: 305 WEEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ M D+ ++ D YN ++ + ++ E
Sbjct: 155 VKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVES------------------------- 189
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
++ M R+ + ST +LI LC +V A+ ++ + +GL P E
Sbjct: 190 ----------AHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAI-LMMEEMPSYGLSPDE 238
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++ +++G E G ++ AL+++ +MV G + + I+G+ K+G ++ A +E
Sbjct: 239 TTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQE 298
Query: 484 MFENQVRQE 492
R +
Sbjct: 299 AVSEGFRPD 307
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 188/402 (46%), Gaps = 23/402 (5%)
Query: 105 LSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLL 164
L SY T+IH L ++ A+ +I+ + +F +++T S +VF L
Sbjct: 1 LHSYCTMIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 60
Query: 165 IKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG 224
I LE + C + R L V TC ++ + + + + Y E+
Sbjct: 61 ITAYLESGFLRDAIECYRLTR---EHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILE 117
Query: 225 LD----------------SDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFEK 265
D + + V + +RP+V ++N LM G+ R G ++
Sbjct: 118 CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDE 177
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
+ M G +PD Y+YSVL+ C+E +M +A +L++EM K + + V + T+I
Sbjct: 178 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLID 237
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
G C+ G + A E +++M + +T+ L+ G C+ GD++ A + ++M KG +P
Sbjct: 238 GHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKP 297
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+ T LI C + + A + K R+++ + + +Y +I GLC+EG+ +A K+
Sbjct: 298 DKFTYTTLIDGCCKEGDLDAAFEHRK-RMIQENIRLDDVAYTAIISGLCQEGRPVDAEKM 356
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
EM+ G +P Y+ I+ + K+G+V + L KEM N
Sbjct: 357 LREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRN 398
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G + + EM+ G +PD ++Y+ L+ C+E + A +
Sbjct: 262 PDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEH 321
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY II G C+ G AE+ REM G++ + T+ ++N +C+
Sbjct: 322 RKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCK 381
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 382 KGDVWKGSKLLKEMQRNGHVPSVXTYNVLM 411
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 44/250 (17%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY-SYSVLMAVFCEERRMREAE 302
R +++ F+ L+ + G +E RL E + + V ++R +
Sbjct: 51 RSDIYVFSGLITAYLESGFLRDA----IECYRLTREHKLWVPFDTCRKVLEHLMKLRYFK 106
Query: 303 KLW---EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+W EE+ + + +N ++ FC+ G++ A+ F + G+ S V++ L+
Sbjct: 107 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 166
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
NGY R GD+D +GF LK+ ++ G+
Sbjct: 167 NGYIRLGDLD-----------EGFR-------------------------LKSAMLASGV 190
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI GLC+E KM++A ++ EM+ KG P+ ++ IDG+ K G V++A
Sbjct: 191 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAME 250
Query: 480 LRKEMFENQV 489
+ K+M +
Sbjct: 251 IYKQMLSQSL 260
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 26/191 (13%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGL-DSDATAGIG 234
+++ ++I + ++S+ L + T N LI+ + + KG ++ + GL D + G+
Sbjct: 244 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCK-KGDLN------QAHGLIDEMSMKGL- 295
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
+P+ T+ L+ G +EG AFE + + E RL D +Y+ +++
Sbjct: 296 ---------KPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRL----DDVAYTAIIS 342
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C+E R +AEK+ EM ++ D Y II FC+ G++ + + +EM +G
Sbjct: 343 GLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVP 402
Query: 351 SSVTFEHLVNG 361
S T+ L+NG
Sbjct: 403 SVXTYNVLMNG 413
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 182/386 (47%), Gaps = 38/386 (9%)
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVK 149
R S + K C + +Y +IH L + + I D +L + +++
Sbjct: 77 RALSHFRGKMWCSPTAFTYCILIHGLCQCQRI----------------DEAYQLLDEMIQ 120
Query: 150 TYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG 209
++C V++ LI + + KI+ ++++M++ R V T +LI +
Sbjct: 121 --KDCHPDAAVYNCLIA---GLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQT 175
Query: 210 KGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDV 269
+ ++ ++ + + P+ +NAL+ G ++ E+V +
Sbjct: 176 NALDEARKLMEKM----------------KESGLTPDTVAYNALLNGLCKQNQLEEVSKL 219
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
EM G EPD +SY+ ++A CE + EA K+ E+M +K DVV YN+++ GFC+
Sbjct: 220 LEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCK 279
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
+ +M AE +M + +T+ L+ G+ RA + A V DM + G P+ T
Sbjct: 280 VSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVT 339
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
L+ LC ++ EA ++L+ V K P +Y L+ GLC+ GK+++A + M
Sbjct: 340 YNCLLDGLCKAGKLEEAHELLEVMVEK-DCAPDVVTYSILVNGLCKLGKVDDARLLLEMM 398
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ +G +P+L ++ IDG+ K G V+
Sbjct: 399 LERGCQPNLVTFNTMIDGFCKAGKVD 424
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 163/345 (47%), Gaps = 28/345 (8%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
K+ E +++ ++CG ++ L+ +V +++ E ++ ++ R + V T
Sbjct: 253 KILEKMIE--KKCGPDVVTYNSLMDGFCKVSKMDEAER---LLEDMVGRRCAPTVITYTT 307
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
LI SR + Y + ++F AGI P++ T+N L+ G + G
Sbjct: 308 LIGGFSRADRLADAYRVMEDMF------KAGIS----------PDLVTYNCLLDGLCKAG 351
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
E+ ++ M C PD +YS+L+ C+ ++ +A L E M ++ + ++V +N
Sbjct: 352 KLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFN 411
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
T+I GFC+ G++ + M VT+ L++GYC+A + A +
Sbjct: 412 TMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------ 465
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G P+ ++ ++ LC +V EA +++ + K G PT Y +I GLC+ + +E
Sbjct: 466 GISPDKASYSSMLEGLCSTGKVEEAQEVMDL-MTKQGCPPTSSHYALIIGGLCDVERGDE 524
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
ALK+ M +G EP+L YS I+G K VE A + M E
Sbjct: 525 ALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLE 569
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 123/242 (50%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ +L+VG + A ++ + +M G PD +Y+ L+ C++ ++ E KL
Sbjct: 160 PDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKL 219
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EEM + E D +YNT++ CE G+ A + +M VT+ L++G+C+
Sbjct: 220 LEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCK 279
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+D A + DM + P T LIG R+ +A +++ + K G+ P
Sbjct: 280 VSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVME-DMFKAGISPDLV 338
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L+ GLC+ GK+EEA ++ MV K P + YS ++G K G V+ A +L + M
Sbjct: 339 TYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMM 398
Query: 485 FE 486
E
Sbjct: 399 LE 400
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 119/243 (48%), Gaps = 7/243 (2%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN+ TFN ++ GF + G ++ V M + C PD +YS L+ +C+ RM++A
Sbjct: 404 QPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFA 463
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ + D +Y++++ G C G++ A+E M G +S + ++ G C
Sbjct: 464 IL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLC 517
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
D A+ + M +G EP T +LI LC +RV +A+++L + K G P
Sbjct: 518 DVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEK-GCVPDV 576
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI G C+ KM+ A + M G EP Y+ I G+ + GNVE A + +
Sbjct: 577 ATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQL 636
Query: 484 MFE 486
M E
Sbjct: 637 MLE 639
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 122/264 (46%), Gaps = 30/264 (11%)
Query: 234 GKDVKRVV--RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
GK +++++ + P+V T+N+LM GF + ++ E + +M C P +Y+ L+
Sbjct: 252 GKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGG 311
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
F R+ +A ++ E+M + D+V YN ++ G C+ G++ A E M
Sbjct: 312 FSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPD 371
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
VT+ LVNG C+ G VD A L+ M +G +P T +I C +V E +L+
Sbjct: 372 VVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLE 431
Query: 412 --------ARVVKF--------------------GLFPTEKSYMFLIKGLCEEGKMEEAL 443
VV + G+ P + SY +++GLC GK+EEA
Sbjct: 432 LMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQ 491
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDG 467
+V M +G P+ Y+ I G
Sbjct: 492 EVMDLMTKQGCPPTSSHYALIIGG 515
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 120/243 (49%), Gaps = 3/243 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P+V T N ++ + + G ++ + ++ C P ++Y +L+ C+ +R+ EA
Sbjct: 54 RFSPDVITHNTILKAYCQIGDLDRALSHF--RGKMWCSPTAFTYCILIHGLCQCQRIDEA 111
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L +EM K+ D YN +I G C++G++ A + M +T+ L+ G
Sbjct: 112 YQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVG 171
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ +D A + M G P+ L+ LC + ++ E +L+ +V+ G P
Sbjct: 172 CCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLE-EMVEAGREP 230
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
SY ++ LCE GK EEA K+ +M+ K P + Y++ +DG+ K ++ A L
Sbjct: 231 DTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLL 290
Query: 482 KEM 484
++M
Sbjct: 291 EDM 293
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 121/242 (50%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P T+ L+ G + ++ + EM + C PD Y+ L+A C+ ++ A +
Sbjct: 90 PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNV 149
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +++ DV+ Y ++I G C+ + A + +M SG+ +V + L+NG C+
Sbjct: 150 LKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCK 209
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
++ + +M G EP+ + ++ LC+ + EA IL+ ++++ P
Sbjct: 210 QNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILE-KMIEKKCGPDVV 268
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L+ G C+ KM+EA ++ +MVG+ P++ Y+ I G+ + + A + ++M
Sbjct: 269 TYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDM 328
Query: 485 FE 486
F+
Sbjct: 329 FK 330
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 161/368 (43%), Gaps = 38/368 (10%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALR---SPE------------NDPKLK--- 142
C ++ +Y T+I SRA + A V+ + SP+ KL+
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAH 357
Query: 143 -LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
L EV+V+ ++C + +L+ + + K++ ++ M++ RG + T N
Sbjct: 358 ELLEVMVE--KDCAPDVVTYSILVN---GLCKLGKVDDARLLLEMMLERGCQPNLVTFNT 412
Query: 202 LIWEVSRGKGVISGY---EIYREVFG----------LDSDATAGIGKDVKRVVRVRPNVH 248
+I + V G+ E+ +EV +D A +D ++ + P+
Sbjct: 413 MIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKA 472
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++++++ G G E+ ++V M + GC P Y++++ C+ R EA K+ + M
Sbjct: 473 SYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVM 532
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
++ E ++ Y+ +I G C+ + A M G T+ L++G+C+ +
Sbjct: 533 SERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKM 592
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D+A + M G EP+ +LI C V +A+++++ + K G P +Y
Sbjct: 593 DAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEK-GCNPDAATYFS 651
Query: 429 LIKGLCEE 436
L++ L E
Sbjct: 652 LMRSLTTE 659
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 136/249 (54%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N+++ GF +EG + V+ EM G P+ +Y+ L+ FC+ R+ A K
Sbjct: 567 PSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKT 626
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EMR+K +E DV AY+ +I GFC+ +M A++ F E+ G+ + + + +++G+
Sbjct: 627 RDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRD 686
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
++++A++ Y M + T LI L + R+ A D+ + K G+ P
Sbjct: 687 LNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSK-GIVPDII 745
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ L+ GLC +G++E A K+ EM K PS+ IY+ I GY +EGN++ A L EM
Sbjct: 746 TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM 805
Query: 485 FENQVRQED 493
+ + +D
Sbjct: 806 LDRGLVPDD 814
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 172/364 (47%), Gaps = 25/364 (6%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAP-FVFDLLIKCCLEVKNIEKIETCVDIVR 185
++R L++P + KLF+ V +CG A F +++++ + K++ ++
Sbjct: 401 LLRGYLKAPLWEEASKLFDEAV----DCGVANIFTYNIMMSWLCKGG---KMDEACSLLD 453
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
++++G+ V + N +I R + ++ ++ D ++P
Sbjct: 454 NMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD----------------LKP 497
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV T++ L+ G +++G EK D++ +M L P ++++ ++ C+ +M EA
Sbjct: 498 NVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKL 557
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ ++ + YN+I+ GF + G + A +REM GV + VT+ L+NG+C++
Sbjct: 558 KNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKS 617
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+D A+ ++M KG E + + LI C KRR E+ L +++ GL P
Sbjct: 618 NRIDLALKTRDEMREKGLELDVTAYSALIDGFC-KRRDMESAQDLFFELLEVGLSPNRIV 676
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I G + ME AL +M+ L Y+ IDG +KEG + A+ L EM
Sbjct: 677 YNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEML 736
Query: 486 ENQV 489
+
Sbjct: 737 SKGI 740
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 154/346 (44%), Gaps = 26/346 (7%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
+I + +++ L LF+ ++ F F+ +I +V + + D ++
Sbjct: 505 LIDGNFKKGDSEKALDLFDQMLSL--NIAPTDFTFNTIINGLCKVGQMSEAR---DKLKN 559
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATAGIGKDVKRVVRVR 244
+ G T N+++ + + S +YRE+ FG V
Sbjct: 560 FLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFG------------------VS 601
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+ +L+ GF + + EM G E D +YS L+ FC+ R M A+ L
Sbjct: 602 PNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDL 661
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ E+ + + + + YN++I GF ++ M A ++++M + T+ L++G +
Sbjct: 662 FFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLK 721
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A +Y +M KG P+ T VL+ LC+K ++ A IL+ K + P+
Sbjct: 722 EGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRK-NMTPSVL 780
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
Y LI G EG ++EA + EM+ +G P Y I+G K
Sbjct: 781 IYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 826
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 115/530 (21%), Positives = 211/530 (39%), Gaps = 83/530 (15%)
Query: 24 SQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLS--LCRSGLTPTQFSQIALGL 81
S F +SS+P S + + T S + + NH++ LC
Sbjct: 28 SSFPGNSSSPYPRYSQDTVPT--SQIHQETTPLSQNHVIDALLCHV-------------- 71
Query: 82 KNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRA-RLIGPARDVIRVALRSPENDPK 140
N+P ALR+F + + + +Y ++HIL R+ G AR ++ + S ++DP
Sbjct: 72 -NDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYV-SGDSDPS 129
Query: 141 LKLFEVLVKTYRECGS------APFVFDLLIKCCLEVKNIEKIETCV------------- 181
+F V C VF+ L+ + IE C
Sbjct: 130 PVVF---VDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVP 186
Query: 182 -------------------DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
D+ ++ RG+ T + ++ + V E +RE
Sbjct: 187 YMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRET 246
Query: 223 --FGLDSDATA--------------GIGKDVKRVVRVR---PNVHTFNALMVGFYREGAF 263
G+ DA A +G ++ ++ R P+ TF +++V +G
Sbjct: 247 KERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNM 306
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
+ + EM G + + LM +C + + A L+ ++ + + + V Y+ +
Sbjct: 307 VEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVL 366
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I G C G + +A E + +M L+G+ S L+ GY +A + A ++++ G
Sbjct: 367 IEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV 426
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
T +++ LC ++ EA +L +V G+ P SY +I G C +G M+ A
Sbjct: 427 A-NIFTYNIMMSWLCKGGKMDEACSLLD-NMVNQGMVPNVVSYNDMILGHCRKGNMDMAS 484
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
V ++M+ + +P++ YS IDG K+G+ E A L +M + D
Sbjct: 485 SVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTD 534
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 134/242 (55%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TF +L+ + G E+ + +M G + +++ L+ FC++ + +A
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EEMR ++ VV YN +I G+C++G M A E REM V+ VT+ +++GYC+
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G++DSA + M +KG P+ T LI LC+++R+ +A ++ + +++ G+ P E
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE-NMLQLGVQPDEF 469
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C+EG +E+AL + EM+ KG P + YS I+G K + A L ++
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529
Query: 485 FE 486
+
Sbjct: 530 YH 531
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 142/251 (56%), Gaps = 2/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV+T+N L+ G E+ V +M GC P+ +Y+ L+A FC + AE
Sbjct: 148 VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAE 207
Query: 303 KLWEEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++ MR++ N + ++V +N+++ G C+ G M A + F EM G+ V++ L++G
Sbjct: 208 RVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSG 267
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC+ G + ++ V+++M ++G P+ T LI C + +A+ ++ A++ + GL
Sbjct: 268 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALV-AQMRERGLRM 326
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
E ++ LI G C++G +++AL EM G +PS+ Y+A I+GY K G +++A L
Sbjct: 327 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 386
Query: 482 KEMFENQVRQE 492
+EM +V+ +
Sbjct: 387 REMEAKRVKPD 397
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 180/404 (44%), Gaps = 60/404 (14%)
Query: 123 PARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKC-CLEVKNIEKIET 179
PA + + +AL +D L + + G AP + +++L++ C ++E
Sbjct: 119 PAYNAVLLAL----SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCAR----GRLEE 170
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
V +V + G + T N L+ R G + G E R V + + A
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRA-GELDGAE--RVVSLMREEGNA-------- 219
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
+PN+ TFN+++ G + G E V+ EM R G PD SY+ L++ +C+ +
Sbjct: 220 ----KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH 275
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
E+ ++ EM + + DVV + ++I C+ G + +A +M G+ + VTF L+
Sbjct: 276 ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 335
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---------- 409
+G+C+ G +D A+L +M + G +P LI C R+ A ++
Sbjct: 336 DGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK 395
Query: 410 ------------------------LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
L +++K G+ P +Y LI+GLCEE ++ +A ++
Sbjct: 396 PDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 455
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
M+ G +P Y+ IDG+ KEGNVE A L EM V
Sbjct: 456 FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 499
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 159/342 (46%), Gaps = 33/342 (9%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
F LI + N+E+ V +V + RGL + T ALI +
Sbjct: 295 TFTSLIHATCKAGNLEQ---AVALVAQMRERGLRMNEVTFTALIDGFCKK---------- 341
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
G DA + + R ++P+V +NAL+ G+ + G + ++ EM +
Sbjct: 342 ----GFLDDALLAV--EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK 395
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +YS +++ +C+ + A +L ++M K V D + Y+++I G CE + A E
Sbjct: 396 PDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 455
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F M GV+ T+ L++G+C+ G+V+ A+ ++++M RKG P+ T VLI L
Sbjct: 456 FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSK 515
Query: 400 KRRVFEA-------------LDILKARVVKFGLFPTE-KSYMFLIKGLCEEGKMEEALKV 445
R EA D +K + E KS + L+KG C +G M+EA KV
Sbjct: 516 SARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKV 575
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
M+ + ++ +YS I G+ + GNV A K+M +
Sbjct: 576 YQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRS 617
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 112/252 (44%), Gaps = 42/252 (16%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V +NA+++ + + M R G P+ Y+Y++L+ C R+ EA +
Sbjct: 116 PSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE---EFFREMGLSGVESSSVTFEHLVNG 361
+MR + V YNT++ FC GE+ AE RE G + + VTF +VNG
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG--NAKPNLVTFNSMVNG 232
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+AG ++ A V+++M R+ GL P
Sbjct: 233 LCKAGRMEGARKVFDEMVRE------------------------------------GLAP 256
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
SY L+ G C+ G + E+L V +EM +G P + +++ I K GN+E A L
Sbjct: 257 DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALV 316
Query: 482 KEMFENQVRQED 493
+M E +R +
Sbjct: 317 AQMRERGLRMNE 328
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 22/237 (9%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+ T+ L+ G +EG EK + EM R G PD +YSVL+ + R +EA
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523
Query: 303 KLWEEMRDKNVEHDVVAYNTI---------------IGGFCEIGEMARAEEFFREMGLSG 347
+L ++ ++ D + Y+ + + GFC G M A++ ++ M
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ + L++G+CR G+V A+ + M R GF P ++ L+ L ++ V EA
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKME--EALKVQAEMVGKGFEPSLEIYS 462
+ ++ + L E S K L + + E + + Q E+ PS+E ++
Sbjct: 644 NAIQDLLTCCPLADAEAS-----KALIDLNRKEGMDYFQAQGEIWYSESSPSVEYWN 695
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 158/293 (53%), Gaps = 6/293 (2%)
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYRE-VFGLDSDATAGIGKDVKRVVR---VRPNVHTF 250
++ A++ ++ G++ Y ++G + G+ +V +R +PNV+++
Sbjct: 368 RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
L+ GF + G ++ +V EM+ G +P+ ++ L++ FC+E R+ EA +++ EM
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
K + DV +N++I G CE+ E+ A R+M GV +++VT+ L+N + R G++
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A + N+M +G + T LI LC V +A + + ++++ G P+ S LI
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE-KMLRDGHAPSNISCNILI 606
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA-TMLRK 482
GLC G +EEA++ Q EMV +G P + +++ I+G + G +E TM RK
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 124/245 (50%), Gaps = 1/245 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN FN L+ F +E + +++ EM R GC+PD Y+++ L++ CE ++ A
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +M + V + V YNT+I F GE+ A + EM G +T+ L+ G
Sbjct: 515 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL 574
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRAG+VD A ++ M R G P + +LI LC V EA++ K V++ G P
Sbjct: 575 CRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR-GSTPD 633
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ LI GLC G++E+ L + ++ +G P ++ + K G V A +L
Sbjct: 634 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLD 693
Query: 483 EMFEN 487
E E+
Sbjct: 694 EGIED 698
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 4/243 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P + TF +M F + + +M + GC P+ Y L+ + R+ EA
Sbjct: 212 KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEA 271
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L EEM D +N +I G C+ + A + M + G +T+ +L+NG
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G VD+A D+ + +PE LI R+ +A +L V +G+ P
Sbjct: 332 LCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI G +EG + AL+V +M KG +P++ Y+ +DG+ K G ++ A +
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 482 KEM 484
EM
Sbjct: 448 NEM 450
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 67/176 (38%), Gaps = 10/176 (5%)
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
H Y +IG GE + +M G+ F ++ Y +AG +
Sbjct: 109 HSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRL 168
Query: 375 YNDM-----CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+M C F+ +E+L+ C K D+L ++ PT ++ +
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIP-----PTLFTFGVV 223
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+K C +++ AL + +M G P+ IY I K V A L +EMF
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279
>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
Length = 410
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 134/242 (55%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN++T+N L+ + R G F+ ++ EM G + SY++L+A C ++++A
Sbjct: 104 VEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAA 163
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+E MR + + +V +N +I G+ + G+M+ A FF +M +G++ S VT+ L+ G+
Sbjct: 164 QLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGF 223
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRA D+ AI ++DM + P T +LIG + + A ++L + + K GL
Sbjct: 224 CRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEML-SEMEKAGLEVD 282
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+SY L+ LC EGKM A K+ M KG +P+ +Y I GY +EG+ A L
Sbjct: 283 VQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIM 342
Query: 483 EM 484
EM
Sbjct: 343 EM 344
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 109/239 (45%), Gaps = 1/239 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V AL+ G + G + V+ M RLG P+ +Y+ L+ + + L
Sbjct: 37 DVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALV 96
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EMR VE ++ YN ++G +C GE A F EM L GV + V++ L+ G CR
Sbjct: 97 GEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRH 156
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + A ++ M R+G P T +LI ++ AL ++ GL P+ +
Sbjct: 157 GKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFN-QMKAAGLQPSVVT 215
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G C + A++ ++M + P+ Y+ I + KE ++ A + EM
Sbjct: 216 YNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEM 274
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 92/224 (41%), Gaps = 36/224 (16%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+V T+N L+ GF R + +M P +Y++L+ F +E M A
Sbjct: 209 LQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAF 268
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ EM +E DV +Y ++ C G+M A + F+ M GV+ ++V ++ ++ GY
Sbjct: 269 EMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGY 328
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
R G A+ + +M + G L P
Sbjct: 329 GREGSSYKALRLIMEMRKSG------------------------------------LIPN 352
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
SY I+ LC EGK +EA + +M G + S I D
Sbjct: 353 VASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESICRVLFD 396
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 111/289 (38%), Gaps = 41/289 (14%)
Query: 107 SYATIIHILSRARLIGPARDVIRV--ALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLL 164
SY +I L R G +D ++ A+R P + F +L+ Y + G
Sbjct: 145 SYNILIAGLCRH---GKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAG--------- 192
Query: 165 IKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG 224
K+ + + + GL V T N LI R + + + ++
Sbjct: 193 -----------KMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDM-- 239
Query: 225 LDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+ R+ P T+ L+ F +E ++ ++ EM + G E D S
Sbjct: 240 --------------KERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQS 285
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y VL+ C E +M A KL++ M K V+ + V Y+ +I G+ G +A EM
Sbjct: 286 YGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMR 345
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
SG+ + ++ + C G A + DM G + S VL
Sbjct: 346 KSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESICRVL 394
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 203/441 (46%), Gaps = 26/441 (5%)
Query: 53 RSKSRWNHLLS--LCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYAT 110
R K W LS L L +I +G ++P L LRFF+F HS +S+
Sbjct: 50 RGKRSWEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCI 109
Query: 111 IIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECG-SAPFVFDLLIKCCL 169
+IH L +A L PA +++ L + F VL Y +C S+ FDLLI+ +
Sbjct: 110 LIHALVKANLFWPASSLLQTLLLRALKPSDV--FNVLFSCYEKCKLSSSSSFDLLIQHYV 167
Query: 170 EVKNIEKIETCVDIVRMLMSR-GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSD 228
+ ++ V + +M++++ L +V T +AL+ + + + E++ ++
Sbjct: 168 RSR---RVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVS---- 220
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
V +RP+V+ + ++ + +++ M GC+ + Y+VL
Sbjct: 221 ------------VGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVL 268
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ C+++++ EA + +++ K+++ DVV Y T++ G C++ E E EM
Sbjct: 269 IDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRF 328
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
S LV G + G ++ A+ + + G P LI LC R+ EA +
Sbjct: 329 SPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA-E 387
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+L R+ K GL P + +Y LI C GK++ AL EMV G + S+ Y++ I+G+
Sbjct: 388 LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH 447
Query: 469 MKEGNVEMATMLRKEMFENQV 489
K G++ A EM ++
Sbjct: 448 CKFGDISAAEGFMAEMINKKL 468
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 3/243 (1%)
Query: 237 VKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
VKRVV V PN+ +NAL+ + F + E ++ M ++G P+ +YS+L+ +FC
Sbjct: 355 VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCR 414
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
++ A EM D ++ V YN++I G C+ G+++ AE F EM +E + VT
Sbjct: 415 RGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVT 474
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ GYC G ++ A+ +Y++M KG P T L+ L + +A+ + +
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN-EM 533
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
++ + P +Y +I+G CEEG M +A + EM KG P Y I G G
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 475 EMA 477
A
Sbjct: 594 SEA 596
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 158/353 (44%), Gaps = 52/353 (14%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
KIE +++V+ ++ G+S + NALI + +G+ ++ D IG
Sbjct: 347 KIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF--------DRMGKIG- 397
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+RPN T++ L+ F R G + EM G + Y Y+ L+ C+
Sbjct: 398 -------LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ AE EM +K +E VV Y +++GG+C G++ +A + EM G+ S TF
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G RAG + A+ ++N+M +P T V+I C++ + +A + LK
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570
Query: 416 KFGLFPTEKSYMFLIKGLC-----------------------------------EEGKME 440
K G+ P SY LI GLC EGK+E
Sbjct: 571 K-GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
EAL V EMV +G + L Y IDG +K + ++ L KEM + ++ +D
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDD 682
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 156/351 (44%), Gaps = 58/351 (16%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI---------WEVSRG 209
+++ +I+ E+K++ + + +++ + + G V + N LI WE
Sbjct: 228 YIYTGVIRSLCELKDLSRAK---EMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGI 284
Query: 210 KGVISGYEIYREV-------FGLDSDATAGIG---KDVKRVVRVRPNVHTFNALMVGFYR 259
K ++G ++ +V +GL IG D +R P+ ++L+ G +
Sbjct: 285 KKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRK 344
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G E+ ++ + G P+ + Y+ L+ C+ R+ EAE L++ M + + V
Sbjct: 345 RGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVT 404
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
Y+ +I FC G++ A F EM +G++ S + L+NG+C+ GD+ +A
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA-------- 456
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
E + E+ +K+ L PT +Y L+ G C +GK+
Sbjct: 457 -----------EGFMAEMINKK-----------------LEPTVVTYTSLMGGYCSKGKI 488
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+AL++ EM GKG PS+ ++ + G + G + A L EM E V+
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK 539
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 9/247 (3%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ GF REG E+ V EM + G + D Y VL+ + + + L +EM
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
D+ ++ D V Y ++I + G+ A + M G + VT+ ++NG C+AG V+
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 370 SAILVYNDMCRKGFEPE----GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
A ++ + M P G +++L D ++ E L ++K GL +
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE----LHNAILK-GLLANTAT 789
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI+G C +G++EEA ++ M+G G P Y+ I+ + +V+ A L M
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 486 ENQVRQE 492
E +R +
Sbjct: 850 EKGIRPD 856
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 3/215 (1%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P+ + S L+ + R A +L+ +M + DV Y +I CE+ +++RA+E
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
M +G + + V + L++G C+ V A+ + D+ K +P+ T L+ LC
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 400 KRRVFEALDILKARV-VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ L+++ + ++F P+E + L++GL + GK+EEAL + +V G P+L
Sbjct: 310 VQEFEIGLEMMDEMLCLRFS--PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+Y+A ID K A +L M + +R D
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPND 402
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 112/220 (50%), Gaps = 11/220 (5%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ + +++ + G F++ +W M GC P+ +Y+ ++ C+ + EAE
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEI---GE--MARAEEFFREMGLSGVESSSVTFEH 357
L +M+ + + V Y G F +I GE M +A E + L G+ +++ T+
Sbjct: 738 VLCSKMQPVSSVPNQVTY----GCFLDILTKGEVDMQKAVELHNAI-LKGLLANTATYNM 792
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L+ G+CR G ++ A + M G P+ T +I ELC + V +A+++ + K
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK- 851
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
G+ P +Y LI G C G+M +A +++ EM+ +G P+
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+N L+ GF R+G E+ ++ M G PDC +Y+ ++ C +++A +LW
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
M +K + D VAYNT+I G C GEM +A E EM G+ ++ T
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE-ERRMREAEK 303
PN T+ A++ G + G + E + +M + P+ +Y + + + E M++A +
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE 774
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L + K + + YN +I GFC G + A E M GV +T+ ++N C
Sbjct: 775 LHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R DV AI ++N M KG P+ LI C + +A + L+ +++ GL P
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE-LRNEMLRQGLIPNN 892
Query: 424 KS 425
K+
Sbjct: 893 KT 894
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 166/333 (49%), Gaps = 20/333 (6%)
Query: 171 VKNIEKIETCVDIVRMLMSRGLSVKVST------CNALIWEVSRGKGVIS-----GYEIY 219
V ++K ET V + + + RG+ V T C + V G V G++
Sbjct: 50 VVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPD 109
Query: 220 REVFGLDSDATAGIGKD------VKR--VVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
+F D IGK +K +V P+V T N+LM G+ +G +KV ++
Sbjct: 110 VVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFH 169
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
M G +PD YSYS+ + +C+ ++ EA +L++EM + V + V YNT+I C+
Sbjct: 170 LMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQAL 229
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
A+ FR+M G+ + + L++G+C+ G++D ++++ +M R+ +P+
Sbjct: 230 RPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYT 289
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
++I +C R+V +A ++L +R++ GL P +Y L+ GLC EG + EAL++ +M
Sbjct: 290 IIINGMCRSRKVKDAKEVL-SRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEE 348
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G P Y+ + G ++ + L EM
Sbjct: 349 DGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEM 381
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 129/270 (47%), Gaps = 3/270 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
FG DA A + + R +P + FN L+ R +E V ++ EM G + +
Sbjct: 18 FGNLDDALASFNRMLDR--NPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNV 75
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+ S+L+ FC + ++ + + + DVV + T+I G C IG+ A +E
Sbjct: 76 CTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKE 135
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
MGL G VT L+ GYC G +D +++ M KG +P+ + + I C +
Sbjct: 136 MGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEK 195
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ EA+++ + G+ P +Y LIK LC+ + +A + +M G P + YS
Sbjct: 196 IDEAMELFDEMSHR-GVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYS 254
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+DG+ K+GN++ +L +EM V+ +
Sbjct: 255 TLLDGFCKQGNLDEMLVLFQEMQRRLVKPD 284
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 101/216 (46%), Gaps = 16/216 (7%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+EKI+ +++ + RG+ T N LI + + ++R++ G+
Sbjct: 193 VEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKM------CACGL 246
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
P++ ++ L+ GF ++G +++ ++ EM R +PD Y++++ C
Sbjct: 247 S----------PDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMC 296
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
R++++A+++ + + ++ DV Y ++ G C G + A FR+M G S
Sbjct: 297 RSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSC 356
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
++ L+ G + D + + + ++M +GF + T
Sbjct: 357 SYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVT 392
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 203/470 (43%), Gaps = 74/470 (15%)
Query: 69 LTPTQFSQIALGLKNN--PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARD 126
L+P +F L LK+N P AL FF F + + SY +IH+L L+ PAR
Sbjct: 82 LSPQEFDSCFLALKSNVNPKTALNFFHFVSETCKFRFTARSYCVLIHLLVGNDLLSPARL 141
Query: 127 V-IRVALRSPENDPKLKLFEVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKI------ 177
+ IR+ D K+ F R A + F+L+ + + VK + +
Sbjct: 142 LLIRLI------DGKVPAFYARNFESRHFEIAQIMADFNLVFEPVIGVKIADLLVHVYST 195
Query: 178 -------ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDAT 230
D+ +L +GL + TC L+ + + + YE+Y D
Sbjct: 196 QFKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVY------DFICL 249
Query: 231 AGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
GI P+VH F+ ++ F + + ++ +M +LG P+ +Y+ ++
Sbjct: 250 GGI----------IPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIH 299
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C+ R+ EA + E+M + V ++ Y+ I G ++ ++ A +EM G
Sbjct: 300 GLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVP 359
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ V + L++GYC+ G++ A+ + +DM KG P T+ LI C ++ +A ++L
Sbjct: 360 NEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVL 419
Query: 411 KARV-------------------VKF---------------GLFPTEKSYMFLIKGLCEE 436
+ + +KF L P + L+ GLC+
Sbjct: 420 EEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKA 479
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
GK EA+++ ++GKGF P++ +A I G K GN++ L ++M E
Sbjct: 480 GKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLE 529
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 148/309 (47%), Gaps = 17/309 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++ + ++R ++ RGL T N LI + V G+E+ E+
Sbjct: 516 NMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEM------------- 562
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
VK+ ++P+++TFN L+ G ++ +W E + G P+ Y+Y V++ +C+
Sbjct: 563 -VKK--GIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKA 619
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
++ E E L E+ K +E + V YN++I +C G M A +M GV S T+
Sbjct: 620 NKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATY 679
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C G VD A + ++M ++G P +IG K ++I+ +
Sbjct: 680 SSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGY-SKLGQMNKVNIVLQEMS 738
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ P + +Y +I G C+ GK +EA K+ EM KG P Y+AF +G KEG VE
Sbjct: 739 SHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVE 798
Query: 476 MATMLRKEM 484
A + EM
Sbjct: 799 EAFKVCDEM 807
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 155/359 (43%), Gaps = 25/359 (6%)
Query: 147 LVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
++K E G P V++ LI ++ NI + + I ++S+G+S T N+LI
Sbjct: 348 VLKEMSELGFVPNEVVYNTLIDGYCKMGNISE---ALKIRDDMLSKGISPNSVTLNSLIQ 404
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDV------------------KRVVR-VRP 245
+ + + E+ G G V + ++R +RP
Sbjct: 405 GFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRP 464
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N L+ G + G + ++W + G P+ + + L+ C+ M+E KL
Sbjct: 465 NDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLL 524
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M ++ + D + YNT+I G C+ G++ E EM G++ TF L++G C A
Sbjct: 525 RDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNA 584
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+D A ++++ + G+ P T V+I C +V E ++L V K L
Sbjct: 585 DKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSK-KLELNSVV 643
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI+ C G M A +++ +M +G S YS+ + G G V+ A L EM
Sbjct: 644 YNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEM 702
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 1/167 (0%)
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
++ + E+ ++ E + + L G+ F ++N +C+ D AI +++ M + G
Sbjct: 227 LLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLG 286
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
P T +I LC R+ EA K ++VK + P+ +Y I GL + K++EA
Sbjct: 287 VAPNVVTYNNIIHGLCKSGRLDEAYR-FKEKMVKEKVSPSLITYSVFINGLIKLEKIDEA 345
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
V EM GF P+ +Y+ IDGY K GN+ A +R +M +
Sbjct: 346 NCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGI 392
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV + ++ G+ + G KV V EM+ P+ ++Y++++ FC+ + +EA KL
Sbjct: 709 PNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKL 768
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
EM +K + D V YN G C+ G++ A + EM V +T+ L++G
Sbjct: 769 LNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 200/413 (48%), Gaps = 33/413 (7%)
Query: 100 LCKHSLSSYATII---HILSRARLIGPARDVIRVALRSPENDPKL--KLFEVLVKTYREC 154
L H L S A + HIL+RARL +R ++ L +P + P L L ++L +
Sbjct: 62 LLSHPLPSSAHLCLAAHILARARLFPHSRSLLS-RLLAPGHHPHLAASLVDLLHRAALAL 120
Query: 155 G----SAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
G + P V D L+ + ++ + VR L + TCN ++ ++R +
Sbjct: 121 GPRRSALPSVVDTLLSLLADRGLLDDAVLALARVRELR---VPPNTRTCNHILLCLARER 177
Query: 211 GVISGYEIYRE-----VFGLD------------SDATAGIGKDVKRVVRVRPNVHTFNAL 253
+ ++ + VF + ++A A + + + + P+V T+N+L
Sbjct: 178 SSELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLAR--MKAIGCSPDVVTYNSL 235
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ G+ + G E+VE + EM GC PD +Y+ L+ FC+ RM A + EM+ + V
Sbjct: 236 IDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGV 295
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
+VV ++T + FC+ G + A + F +M + G++ + VT+ LV+G C+AG +D A++
Sbjct: 296 MANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALV 355
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ N+M ++G T VL+ LC + +V EA D+ + + + G+ E Y LI G
Sbjct: 356 LTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRL-MERAGIRANELLYTTLIHGH 414
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
E AL + +EM KG E + +Y A I G ++ A L +M E
Sbjct: 415 FVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDE 467
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 127/247 (51%), Gaps = 1/247 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV T+ L+ G +EG + EDV+ M R G + Y+ L+ + A L
Sbjct: 368 NVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLL 427
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM+DK +E DV Y +I G C + ++ A+ +M G++ ++V + ++++ +A
Sbjct: 428 SEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKA 487
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
AI + M GF P T L+ LC + EA+ ++V GL P ++
Sbjct: 488 RKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFN-KMVDLGLEPNVQA 546
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y L+ GLC+ G++++A+ + EM+ KG + ++ +DG++K+GN++ A L+ +M
Sbjct: 547 YTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMI 606
Query: 486 ENQVRQE 492
+ ++ +
Sbjct: 607 NSGLQLD 613
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 1/239 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V + AL+ G ++ + + +M G +P+ Y+ +M + R+ EA L
Sbjct: 438 DVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALL 497
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++M D ++V Y ++ G C+ G + A F +M G+E + + LV+G C+
Sbjct: 498 QKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKN 557
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G +D A+L+ ++M KG + L+ + + +A LKA+++ GL
Sbjct: 558 GRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAF-ALKAKMINSGLQLDLYG 616
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y + G C ++EA +V +EM+ G P +Y+ I+ K GN+E A +L+ EM
Sbjct: 617 YTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 42/266 (15%)
Query: 224 GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
GL DA + + R +RV PN T N +++ RE + E ++ ++ P+ +
Sbjct: 142 GLLDDAVLALAR--VRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLP----APNVF 195
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
++++++ C+E + EA L M+ DVV YN++I G+ + GE+ E+ EM
Sbjct: 196 TFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEM 255
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G VT+ LVN +C+ G ++ A + +M R+G
Sbjct: 256 RGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREG--------------------- 294
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
+ A VV F F + C+ G + EA+K+ A+M KG +P+ Y+
Sbjct: 295 ------VMANVVTFSTF---------VDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTC 339
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQV 489
+DG K G ++ A +L EM + V
Sbjct: 340 LVDGTCKAGRLDDALVLTNEMVQQGV 365
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 140/326 (42%), Gaps = 45/326 (13%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+Y ++ L + + A DV R+ R+ +L L+ L+ + FV+
Sbjct: 371 TYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANEL-LYTTLIHGH-------FVY----- 417
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW------EVSRGKGVISGYE--- 217
KN E+ + ++ + +G+ + VS ALIW ++ K +++ +
Sbjct: 418 -----KNSERA---LSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECG 469
Query: 218 ------IYREVFGL------DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEK 265
IY + +S+A A + K + RPN+ T+ AL+ G + G+ ++
Sbjct: 470 LKPNNVIYTNIMDACFKARKESEAIALLQKMMDS--GFRPNIVTYCALVDGLCKAGSIDE 527
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
+ +M LG EP+ +Y+ L+ C+ R+ +A L +EM DK + D V +++
Sbjct: 528 AISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMD 587
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
G + G + A +M SG++ + V G+C + A V ++M G P
Sbjct: 588 GHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITP 647
Query: 386 EGSTIEVLIGELCDKRRVFEALDILK 411
+ LI + C K E IL+
Sbjct: 648 DAVVYNCLINK-CQKLGNMEEAAILQ 672
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 149/272 (54%), Gaps = 3/272 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + ++R ++ PNV TFN+L+ F +EG + E ++ EM + +P+
Sbjct: 288 YGRWSDASRLLSDMLER--KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+Y+ L+ FC R+ EA++++ M K+ DVV YNT+I GFC+ ++ E FR+
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G+ ++VT+ L++G+ +A D D+A +V+ M G P T L+ LC +
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ +A+ + + + K + P +Y + +G+C+ GK+E+ + + KG +P + Y+
Sbjct: 466 LEKAMVVFE-YLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
I G+ K+G E A L +M E+ + G
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 1/233 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RP+V T+++L+ G + + +M P+ +++ L+ F +E ++ EAE
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL++EM ++++ ++V YN++I GFC + A++ F M VT+ L+NG+
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A V + ++ DM R+G T LI A + K ++V G+ P
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK-QMVSDGVHPN 449
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+Y L+ GLC+ GK+E+A+ V + EP + Y+ +G K G VE
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 110/213 (51%), Gaps = 1/213 (0%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
+++ EM G PD ++YS L++ C R +A +L +M ++ + +VV +N++I F
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
+ G++ AE+ F EM ++ + VT+ L+NG+C +D A ++ M K P+
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI C ++V + +++ + + + GL +Y LI G + + A V
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFR-DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+MV G P++ Y+ +DG K G +E A ++
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 121/250 (48%), Gaps = 1/250 (0%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
++ V N++T+N ++ R + +M +LG P + + L+ FC R+
Sbjct: 93 ILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 152
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
EA L ++M + + D V + T++ G + + + A M + G + VT+ ++
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
NG C+ G+ D A+ + N M + E + +I LC R V +AL++ K G+
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK-GI 271
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI LC G+ +A ++ ++M+ + P++ +++ ID + KEG + A
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 480 LRKEMFENQV 489
L EM + +
Sbjct: 332 LFDEMIQRSI 341
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 122/240 (50%), Gaps = 3/240 (1%)
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
A A +GK +K + P++ T N+L+ GF + + +M +G +PD +++ L
Sbjct: 119 ALAILGKMMK--LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTL 176
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ + + EA L E M K + D+V Y +I G C+ GE A +M +
Sbjct: 177 VHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI 236
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
E+ V + +++ C+ VD A+ ++ +M KG P+ T LI LC+ R +A
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+L + +++ + P ++ LI +EGK+ EA K+ EM+ + +P++ Y++ I+G+
Sbjct: 297 LL-SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 153/348 (43%), Gaps = 36/348 (10%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
AL F+ +K + + + +Y+++I L A ++ L N P + F L
Sbjct: 259 ALNLFTEMDNKGI-RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN-PNVVTFNSL 316
Query: 148 VKTYRECGS---APFVFDLLIKCCLEVKNI------------EKIETCVDIVRMLMSRGL 192
+ + + G A +FD +I+ ++ + ++++ I +++S+
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 193 SVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDAT-----------AGIGKDVKR 239
V T N LI + K V+ G E++R++ GL + A + +
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 240 VVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
V + V PN+ T+N L+ G + G EK V+ + + EPD Y+Y+++ C
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ ++ + L+ + K V+ DV+AYNT+I GFC+ G A F +M G S
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
T+ L+ + R GD ++ + +M F + ST ++ L D R
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGR 604
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 1/230 (0%)
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
++ D++ EM + P +S L++ + ++ E+M V H++ YN
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I C +++ A +M G S VT L+NG+C + A+ + + M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
++P+ T L+ L + EA+ +++ VVK G P +Y +I GLC+ G+ + A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
L + +M E + IYS ID K +V+ A L EM +R +
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 187/420 (44%), Gaps = 62/420 (14%)
Query: 83 NNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND---P 139
NNP + +F F++ H S+Y ++L R+ D++ + +D P
Sbjct: 51 NNPKVGFKFLEFSRLNLNVNHCYSTY----NLLMRSLCQMGHHDLVNIVFDYMGSDGHLP 106
Query: 140 KLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS-- 197
KL LV + FD++ K EV+ E V I + + LSV V
Sbjct: 107 DSKLLGFLVTWMAQASD----FDMVKKLLAEVQGKE-----VRINSFVYNNLLSVLVKQN 157
Query: 198 ----------------------TCNALIWEVSRGKGVISGYEIYR--EVFGLDSDATAGI 233
T N LI + R GV +E+++ E FG
Sbjct: 158 QVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFG--------- 208
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM-ARLGCEPDCYSYSVLMAVF 292
P+V T+N L+ G + ++ +++ E+ +R C PD +Y+ +++ F
Sbjct: 209 ---------CLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGF 259
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C+ +M+EA L+EEM ++ +V+ +N +I GF +IG +A AE +R+M +
Sbjct: 260 CKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADV 319
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VTF L++GYCRAG V+ + +N M + P T VLI LC + R+ EA D L
Sbjct: 320 VTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFL-G 378
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
++ + P Y +I G C+ G ++E + EM K +P ++ I G+ +G
Sbjct: 379 QIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKG 438
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 148/323 (45%), Gaps = 28/323 (8%)
Query: 147 LVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
L K Y S P + F++LI+ V +++ ++ + + S G V T N LI
Sbjct: 165 LFKEYLVMQSPPDTWTFNILIRGLCRVGGVDR---AFEVFKDMESFGCLPDVVTYNTLIN 221
Query: 205 EVSRGKGVISGYEIYREVFGLDSDAT---------------AGIGKDVKRVVR------V 243
+ + V G E+++E+ SD + +G K+ + +
Sbjct: 222 GLCKANEVQRGCELFKEIQS-RSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGI 280
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNV TFN L+ GF + G + E ++ +MA C D +++ L+ +C ++ K
Sbjct: 281 QPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLK 340
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
W M+ +NV V Y +I C+ + A +F ++ S + + +++G+C
Sbjct: 341 FWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFC 400
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+AG+VD ++ +M K +P+ T +LI C K R+FEA++I R++ P
Sbjct: 401 KAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFN-RMLATRCAPDN 459
Query: 424 KSYMFLIKGLCEEGKMEEALKVQ 446
+ LI L + G EA +++
Sbjct: 460 ITVNSLISCLLKAGMPNEAYRIR 482
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N LM + G + V V+ M G PD L+ + +KL E+
Sbjct: 75 TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEV 134
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ K V + YN ++ + ++ A F+E + + TF L+ G CR G V
Sbjct: 135 QGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGV 194
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D A V+ DM G P+ T LI LC V ++ K + P +Y
Sbjct: 195 DRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTS 254
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+I G C+ GKM+EA + EM+ G +P++ ++ IDG+ K GN+ A + ++M
Sbjct: 255 IISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKM 310
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 16/236 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K++ ++ +M G+ V T N LI + + +YR++ D A
Sbjct: 264 KMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSA------ 317
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+V TF +L+ G+ R G W M P Y+Y+VL+ C+E
Sbjct: 318 ----------DVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKE 367
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ EA ++++ ++ YN +I GFC+ G + +EM + VTF
Sbjct: 368 NRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTF 427
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
L+ G+C G + AI ++N M P+ T+ LI L EA I K
Sbjct: 428 TILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRK 483
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 163/348 (46%), Gaps = 26/348 (7%)
Query: 141 LKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
LK+ +V+V+ G P F +++++ C + +E+ + I+ ++ RG ++T
Sbjct: 306 LKVMDVMVQE----GHDPDVFTYNIVVNCLCKNGQLEEAKG---ILNQMVDRGCLPDITT 358
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
N LI + G + ++ R+V V V P+V+TFN L+
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQV----------------TVKGVSPDVYTFNILINALC 402
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ G ++ EM GC PD +Y+ L+ C ++ +A L ++M +
Sbjct: 403 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTI 462
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
YNTII G C+ + AEE F +M L G+ +++TF L++G C+ +D A + N M
Sbjct: 463 TYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQM 522
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+G +P T ++ C + + +A DIL+ G +Y LI GLC+ G+
Sbjct: 523 ISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTAN-GFEVDVVTYGTLINGLCKAGR 581
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ ALKV M KG P+ + Y+ + + N+ A L +EM E
Sbjct: 582 TQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 629
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 124/243 (51%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N ++ + G E+ + + +M GC PD +++ L+A C R+ EA L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ K V DV +N +I C++G+ A F EM SG VT+ L++ C
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A+ + DM G T +I LC K R+ EA ++ ++ G+
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ-GISRNAI 497
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI GLC++ K+++A ++ +M+ +G +P+ Y++ + Y K+G+++ A + + M
Sbjct: 498 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557
Query: 485 FEN 487
N
Sbjct: 558 TAN 560
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 146/325 (44%), Gaps = 20/325 (6%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
V++ L+ +E ++ +E+ + + +RG+ V T N L+ K + +++
Sbjct: 148 VYNHLLNVLVEGSKMKLLES---VYSEMGARGIKPDVVTFNTLM------KALCRAHQVR 198
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
V L+ ++ G+ P+ TF LM GF EG+ E V M +GC
Sbjct: 199 TAVIMLEEMSSRGVA----------PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCS 248
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
+ +VL+ +C+ R+ +A ++ E D + YNT + G C+ + A +
Sbjct: 249 ATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKV 308
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
M G + T+ +VN C+ G ++ A + N M +G P+ +T LI LC
Sbjct: 309 MDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCT 368
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
R+ EALD+ + VK G+ P ++ LI LC+ G AL++ EM G P
Sbjct: 369 GNRLEEALDLARQVTVK-GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEV 427
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ ID G + A L K+M
Sbjct: 428 TYNTLIDNLCSLGKLGKALDLLKDM 452
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 124/244 (50%), Gaps = 7/244 (2%)
Query: 245 PNVHTFNALMVGFYRE---GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
P+ T+N + G + G KV DV V+ G +PD ++Y++++ C+ ++ EA
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQE---GHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ + +M D+ D+ +NT+I C + A + R++ + GV TF L+N
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ GD A+ ++ +M G P+ T LI LC ++ +ALD+LK + G
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK-DMESTGCPR 459
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ +Y +I GLC++ ++EEA +V +M +G + ++ IDG K+ ++ A L
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519
Query: 482 KEMF 485
+M
Sbjct: 520 NQMI 523
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 1/274 (0%)
Query: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
GV+ + E L DA I ++ + ++ + +N L+ + +E V+
Sbjct: 110 GVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVY 169
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
EM G +PD +++ LM C ++R A + EEM + V D + T++ GF E
Sbjct: 170 SEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEE 229
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G + A M G ++ VT L+NGYC+ G V+ A+ GFEP+ T
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+ LC V AL ++ +V+ G P +Y ++ LC+ G++EEA + +MV
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDV-MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+G P + ++ I +E A L +++
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 6/242 (2%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMAR--LGCEPDCYSYSVLMAVFCEERRMREAEKL 304
VH+F + + + F+ D+ + + G + D Y+ L+ V E +M+ E +
Sbjct: 112 VHSF---LDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESV 168
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM + ++ DVV +NT++ C ++ A EM GV TF L+ G+
Sbjct: 169 YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVE 228
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +++A+ V M G T+ VLI C RV +AL ++ + G P +
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQI 287
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y + GLC+ + ALKV MV +G +P + Y+ ++ K G +E A + +M
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 485 FE 486
+
Sbjct: 348 VD 349
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 156/377 (41%), Gaps = 46/377 (12%)
Query: 22 LLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFS----QI 77
+L+Q P + LIA +L T +R + + + G++P ++
Sbjct: 343 ILNQMVDRGCLPDITTFNTLIA---ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399
Query: 78 ALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN 137
AL +PHLALR F ++ S C +Y T+I L +G A D+++ +
Sbjct: 400 ALCKVGDPHLALRLFEEMKN-SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG-- 456
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
C + ++ +I + IE+ E D + + +G+S
Sbjct: 457 ----------------CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL---QGISRNAI 497
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T N LI + + K + +E+ ++ + G+ +PN T+N+++ +
Sbjct: 498 TFNTLIDGLCKDKKIDDAFELINQMI------SEGL----------QPNNITYNSILTHY 541
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
++G +K D+ M G E D +Y L+ C+ R + A K+ MR K +
Sbjct: 542 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTP 601
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD-VDSAILVYN 376
AYN ++ + A FREM G ++T++ + G CR G + A
Sbjct: 602 KAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFML 661
Query: 377 DMCRKGFEPEGSTIEVL 393
+M KGF PE S+ +L
Sbjct: 662 EMVDKGFIPEFSSFRML 678
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 153/357 (42%), Gaps = 42/357 (11%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIR---VALRSPE--------------NDP--KL 141
C ++++ T+I L + A D+ R V SP+ DP L
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
+LFE + + C ++ LI + ++ K+ +D+++ + S G T N
Sbjct: 412 RLFEEMKNS--GCTPDEVTYNTLID---NLCSLGKLGKALDLLKDMESTGCPRSTITYNT 466
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
+I + + + E++ ++ D++ + R N TFN L+ G ++
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQM-------------DLQGISR---NAITFNTLIDGLCKDK 510
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ ++ +M G +P+ +Y+ ++ +C++ +++A + E M E DVV Y
Sbjct: 511 KIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYG 570
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
T+I G C+ G A + R M + G+ + + ++ R ++ A+ ++ +M
Sbjct: 571 TLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 630
Query: 382 GFEPEGSTIEVLIGELC-DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
G P+ T +++ LC + EA D + V K G P S+ L +GL G
Sbjct: 631 GEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK-GFIPEFSSFRMLAEGLLNLG 686
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 129/249 (51%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P T+N++M GF +EG+ + EM G P+ +Y+ L+ FC+ A K+
Sbjct: 591 PVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKM 650
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EMR+K +E D+ AY +I GFC+ ++ A F E+ G+ +SV + L++GY
Sbjct: 651 RNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRN 710
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
++++A+ + M +G + T LI L + R+ ALD+ K G+ P
Sbjct: 711 LNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAK-GIIPDII 769
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI GLC +G++E A K+ AEM P++ IY+A I G+ K GN++ A L EM
Sbjct: 770 IYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEM 829
Query: 485 FENQVRQED 493
+ + D
Sbjct: 830 LDKGLTPND 838
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 128/241 (53%), Gaps = 4/241 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE-PDCYSYSVLMAVFCEERRMREAEK 303
P V N+L+ GF + + E+ ++ E + C+ + ++Y+ L++ C+E +M EA
Sbjct: 417 PTVFIVNSLIRGFLKVESREEASKLFDEA--VACDIANIFTYNSLLSWLCKEGKMSEATT 474
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
LW++M DK + V+YN++I G C G + A F +M G++ + +T+ L++GY
Sbjct: 475 LWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYF 534
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ GD + A V++ M + P T + I LC R EA D+LK + V+ G P
Sbjct: 535 KNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLK-KFVEKGFVPVC 593
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y ++ G +EG + AL EM G P++ Y+ I+G+ K N ++A +R E
Sbjct: 594 LTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNE 653
Query: 484 M 484
M
Sbjct: 654 M 654
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 127/242 (52%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV T++ LM G+++ G E V+ M P ++Y++ + C+ R EA+
Sbjct: 519 LKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQ 578
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ ++ +K + YN+I+ GF + G ++ A +REM SGV + +T+ L+NG+
Sbjct: 579 DMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGF 638
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ + D A+ + N+M KG E + + LI C K+ + E L + ++ GL P
Sbjct: 639 CKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDI-ETASWLFSELLDGGLSPN 697
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y LI G ME AL +Q M+G+G L+ Y+ IDG +KEG + +A L
Sbjct: 698 SVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYS 757
Query: 483 EM 484
EM
Sbjct: 758 EM 759
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 118/238 (49%), Gaps = 1/238 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV T+ L+ GF + + + EM G E D +Y L+ FC+++ + A
Sbjct: 624 VSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETAS 683
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ E+ D + + V YN++I G+ + M A + M G+ T+ L++G
Sbjct: 684 WLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGL 743
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G + A+ +Y++M KG P+ VLI LC K ++ A IL A + + + P
Sbjct: 744 LKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKIL-AEMERDSITPN 802
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
Y LI G + G ++EA ++ EM+ KG P+ Y I+G +K GN + ++L
Sbjct: 803 VPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSALKSLL 860
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 126/248 (50%), Gaps = 8/248 (3%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+ L+ + G K D++ +M P + + L+ F + EA KL
Sbjct: 382 PNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKL 441
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++E ++ + + YN+++ C+ G+M+ A +++M G+ + V++ ++ G+CR
Sbjct: 442 FDEAVACDIAN-IFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCR 500
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIG---ELCDKRRVFEALDILKARVVKFGLFP 421
G++D A V++DM G +P T +L+ + D F D R+V + P
Sbjct: 501 QGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFD----RMVDENIVP 556
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
++ +Y I GLC+ G+ EA + + V KGF P Y++ +DG++KEG+V A
Sbjct: 557 SDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAY 616
Query: 482 KEMFENQV 489
+EM E+ V
Sbjct: 617 REMCESGV 624
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/500 (20%), Positives = 198/500 (39%), Gaps = 94/500 (18%)
Query: 67 SGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRA-RLIGPAR 125
S L T L K +P+ AL +F + SL S ++HIL+R+ + A+
Sbjct: 80 SVLARTNVIDTLLSYKRDPYSALTYFKQLECTRGFVRSLDSLCVLLHILTRSSETLKQAQ 139
Query: 126 DVIRVALRSPEND-PKLKLFEVLVKTYR-ECGSAPFVFDLLIKCCLEVKNIEKIETCVDI 183
+++ + P + + + T R + S +++ L+ ++ K+ +
Sbjct: 140 NLLNRFISGDSGPMPNILVDHFIGSTKRFDFDSDIRIYNYLLNSYIKA---NKLNDAIGC 196
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR- 242
L+ + + N L+ + + + E+Y K V++
Sbjct: 197 FNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYE-----------------KMVLKG 239
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V + T + +M ++ E+ + ++E G + D +YS+++ FC+ + A
Sbjct: 240 VHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELAC 299
Query: 303 KLWEEMRDKN-----------------------------------VEHDVVAYNTIIGGF 327
L ++MRDK V+ +VV T++ G+
Sbjct: 300 GLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGY 359
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP-- 385
C+ ++ A EFF +M +G + VT+ L+ C+ G++ A +Y M K P
Sbjct: 360 CKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTV 419
Query: 386 -----------------EGS---------------TIEVLIGELCDKRRVFEALDILKAR 413
E S T L+ LC + ++ EA + +
Sbjct: 420 FIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKM 479
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+ K GL PT+ SY +I G C +G ++ A V ++M+ G +P++ YS +DGY K G+
Sbjct: 480 LDK-GLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGD 538
Query: 474 VEMATMLRKEMFENQVRQED 493
E A + M + + D
Sbjct: 539 TEYAFYVFDRMVDENIVPSD 558
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 121/296 (40%), Gaps = 51/296 (17%)
Query: 43 ATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIAL--GL--KNNPHLALRFFSFTQHK 98
+V S LT +R +C SG++P + L G NN LAL+ + ++K
Sbjct: 607 GSVSSALTAYRE---------MCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNK 657
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
L + +++Y +I + + I A + L + P ++ L+ YR
Sbjct: 658 GL-ELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLS-PNSVIYNSLISGYR------ 709
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
N+ +E +++ + ++ G+S + T LI + + ++ ++
Sbjct: 710 --------------NLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDL 755
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
Y E+ + GI P++ + L+ G +G E + + EM R
Sbjct: 756 YSEM------SAKGI----------IPDIIIYTVLINGLCGKGQLENAQKILAEMERDSI 799
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
P+ Y+ L+A + ++EA +L EM DK + + Y+ +I G + G A
Sbjct: 800 TPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSA 855
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 163/348 (46%), Gaps = 26/348 (7%)
Query: 141 LKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
LK+ +V+V+ G P F +++++ C + +E+ + I+ ++ RG ++T
Sbjct: 306 LKVMDVMVQE----GHDPDVFTYNIVVNCLCKNGQLEEAKG---ILNQMVDRGCLPDITT 358
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
N LI + G + ++ R+V V V P+V+TFN L+
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQV----------------TVKGVSPDVYTFNILINALC 402
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ G ++ EM GC PD +Y+ L+ C ++ +A L ++M +
Sbjct: 403 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTI 462
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
YNTII G C+ + AEE F +M L G+ +++TF L++G C+ +D A + N M
Sbjct: 463 TYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQM 522
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+G +P T ++ C + + +A DIL+ G +Y LI GLC+ G+
Sbjct: 523 ISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTAN-GFEVDVVTYGTLINGLCKAGR 581
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ ALKV M KG P+ + Y+ + + N+ A L +EM E
Sbjct: 582 TQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 629
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 124/243 (51%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N ++ + G E+ + + +M GC PD +++ L+A C R+ EA L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ K V DV +N +I C++G+ A F EM SG VT+ L++ C
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A+ + DM G T +I LC K R+ EA ++ ++ G+
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ-GISRNAI 497
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI GLC++ K+++A ++ +M+ +G +P+ Y++ + Y K+G+++ A + + M
Sbjct: 498 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557
Query: 485 FEN 487
N
Sbjct: 558 TAN 560
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 146/325 (44%), Gaps = 20/325 (6%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
V++ L+ +E ++ +E+ + + +RG+ V T N L+ K + +++
Sbjct: 148 VYNHLLNVLVEGSKMKLLES---VYSEMGARGIKPDVVTFNTLM------KALCRAHQVR 198
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
V L+ ++ G+ P+ TF LM GF EG+ E V M +GC
Sbjct: 199 TAVLMLEEMSSRGVA----------PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCS 248
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
+ +VL+ +C+ R+ +A ++ E D + YNT + G C+ + A +
Sbjct: 249 ATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKV 308
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
M G + T+ +VN C+ G ++ A + N M +G P+ +T LI LC
Sbjct: 309 MDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCT 368
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
R+ EALD+ + VK G+ P ++ LI LC+ G AL++ EM G P
Sbjct: 369 GNRLEEALDLARQVTVK-GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEV 427
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ ID G + A L K+M
Sbjct: 428 TYNTLIDNLCSLGKLGKALDLLKDM 452
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 124/244 (50%), Gaps = 7/244 (2%)
Query: 245 PNVHTFNALMVGFYRE---GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
P+ T+N + G + G KV DV V+ G +PD ++Y++++ C+ ++ EA
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQE---GHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ + +M D+ D+ +NT+I C + A + R++ + GV TF L+N
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ GD A+ ++ +M G P+ T LI LC ++ +ALD+LK + G
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK-DMESTGCPR 459
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ +Y +I GLC++ ++EEA +V +M +G + ++ IDG K+ ++ A L
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519
Query: 482 KEMF 485
+M
Sbjct: 520 NQMI 523
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 1/274 (0%)
Query: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
GV+ + E L DA I ++ + ++ + +N L+ + +E V+
Sbjct: 110 GVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVY 169
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
EM G +PD +++ LM C ++R A + EEM + V D + T++ GF E
Sbjct: 170 SEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEE 229
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G + A M G ++ VT L+NGYC+ G V+ A+ GFEP+ T
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+ LC V AL ++ +V+ G P +Y ++ LC+ G++EEA + +MV
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDV-MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+G P + ++ I +E A L +++
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 6/242 (2%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMAR--LGCEPDCYSYSVLMAVFCEERRMREAEKL 304
VH+F + + + F+ D+ + + G + D Y+ L+ V E +M+ E +
Sbjct: 112 VHSF---LDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESV 168
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM + ++ DVV +NT++ C ++ A EM GV TF L+ G+
Sbjct: 169 YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVE 228
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +++A+ V M G T+ VLI C RV +AL ++ + G P +
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQI 287
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y + GLC+ + ALKV MV +G +P + Y+ ++ K G +E A + +M
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 485 FE 486
+
Sbjct: 348 VD 349
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 156/377 (41%), Gaps = 46/377 (12%)
Query: 22 LLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFS----QI 77
+L+Q P + LIA +L T +R + + + G++P ++
Sbjct: 343 ILNQMVDRGCLPDITTFNTLIA---ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399
Query: 78 ALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN 137
AL +PHLALR F ++ S C +Y T+I L +G A D+++ +
Sbjct: 400 ALCKVGDPHLALRLFEEMKN-SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG-- 456
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
C + ++ +I + IE+ E D + + +G+S
Sbjct: 457 ----------------CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL---QGISRNAI 497
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T N LI + + K + +E+ ++ + G+ +PN T+N+++ +
Sbjct: 498 TFNTLIDGLCKDKKIDDAFELINQMI------SEGL----------QPNNITYNSILTHY 541
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
++G +K D+ M G E D +Y L+ C+ R + A K+ MR K +
Sbjct: 542 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTP 601
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD-VDSAILVYN 376
AYN ++ + A FREM G ++T++ + G CR G + A
Sbjct: 602 KAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFML 661
Query: 377 DMCRKGFEPEGSTIEVL 393
+M KGF PE S+ +L
Sbjct: 662 EMVDKGFIPEFSSFRML 678
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 153/357 (42%), Gaps = 42/357 (11%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIR---VALRSPE--------------NDP--KL 141
C ++++ T+I L + A D+ R V SP+ DP L
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
+LFE + + C ++ LI + ++ K+ +D+++ + S G T N
Sbjct: 412 RLFEEMKNS--GCTPDEVTYNTLID---NLCSLGKLGKALDLLKDMESTGCPRSTITYNT 466
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
+I + + + E++ ++ D++ + R N TFN L+ G ++
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQM-------------DLQGISR---NAITFNTLIDGLCKDK 510
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ ++ +M G +P+ +Y+ ++ +C++ +++A + E M E DVV Y
Sbjct: 511 KIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYG 570
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
T+I G C+ G A + R M + G+ + + ++ R ++ A+ ++ +M
Sbjct: 571 TLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 630
Query: 382 GFEPEGSTIEVLIGELC-DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
G P+ T +++ LC + EA D + V K G P S+ L +GL G
Sbjct: 631 GEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK-GFIPEFSSFRMLAEGLLNLG 686
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 197/425 (46%), Gaps = 31/425 (7%)
Query: 91 FFSF--TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF++ + S +H+L SY T+IH L +++ A+ +I+V + +F ++
Sbjct: 3 FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFATIL 62
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+T S +V LI LE + C + R L V TC ++ + +
Sbjct: 63 ETKGTQRSDIYVLSGLITAYLESGFLRDAIECYRLTR---EHKLWVPFDTCRKVLEHLMK 119
Query: 209 GKGVISGYEIYREVFGLD----------------SDATAGIGKDVKRVVR---VRPNVHT 249
K + Y E+ D + + V + +RP+V +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N LM G+ R G + + M G +PD Y+YSVL+ C+E +M +A +L++EM
Sbjct: 180 YNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + + V + T+I G C+ G + A E +++M + +T+ L+ G + GD+
Sbjct: 240 VKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLK 299
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + ++M KG +P+ T LI C + + A + K R+++ + + +Y L
Sbjct: 300 QAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRK-RMIQENIRLDDVAYTAL 358
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I GLC+EG+ +A K+ EM+ G +P Y+ I+ + K+G+V + L KEM
Sbjct: 359 ISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEM----- 413
Query: 490 RQEDG 494
Q DG
Sbjct: 414 -QRDG 417
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++ D+ EM+ G +PD ++Y L+ C+E + A +
Sbjct: 280 PDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEH 339
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C+ G AE+ REM G++ T+ ++N +C+
Sbjct: 340 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCK 399
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 400 KGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 92/190 (48%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ L + T N LI+ + + + +++ +D + G+
Sbjct: 262 RVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDL------IDEMSMKGL-- 313
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 314 --------KPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRL----DDVAYTALISG 361
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM ++ D Y II FC+ G++ + + +EM G S
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 422 VVTYNVLMNG 431
>gi|449530002|ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cucumis sativus]
Length = 539
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 209/461 (45%), Gaps = 30/461 (6%)
Query: 31 STPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS----GLTPTQFSQIALGLKN--N 84
S P +D+ N ATV S+ + W+ +L R L ++ L + +
Sbjct: 28 SIPVADKLINDDATVNSICDSLTRRQSWD---TLSRKFQFLELNDFLVQKVLLKFQQPVD 84
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPE-NDPKLKL 143
AL FF ++ + H S+ +IHIL +ARL+ AR ++ L+ E N +
Sbjct: 85 AKRALGFFHWSAKRKNFNHGPQSFGIMIHILVKARLVLDARALLESILKKNEGNSFDYSV 144
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
+ L+ +Y GS+PFVFDLL++ C +++ I+ CV L RG S+ + + N LI
Sbjct: 145 VDSLMDSYEVTGSSPFVFDLLVQTCAKLRLID-FALCV--CSHLEERGFSLSLISFNTLI 201
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
V + + ++IY ++ +++ RV PN T ++ +EG
Sbjct: 202 HVVEKSDQNLKVWKIYEQM--------------IRK--RVYPNAITVRIMINSLCKEGKL 245
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
++ D+ + C + L+ EE R+ + L + M KN+ D +AY+ I
Sbjct: 246 QETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGITLLKRMLQKNMVLDDIAYSLI 305
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
+ + G + E F EM G +++S + + +CR G V+ A + +M G
Sbjct: 306 VYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVHCRGGKVEEAHCLMQEMENMGL 365
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
+P T +LI E C E + + ++++ G P+ + I +CE+G +++A
Sbjct: 366 KPYPETFNLLI-EGCAISGHSEEILSMCEKMLERGFLPSCSVFNVAIAKICEKGDVKKAN 424
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ ++ KGF P Y+ I GY K G ++ L EM
Sbjct: 425 ALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEILKLYYEM 465
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 164/387 (42%), Gaps = 50/387 (12%)
Query: 86 HLALRFFSFTQHKSLCKHSLSSYATIIHILSRA---------------RLIGPARDVIRV 130
HL R FS SL S+ T+IH++ ++ + + P +R+
Sbjct: 184 HLEERGFSL---------SLISFNTLIHVVEKSDQNLKVWKIYEQMIRKRVYPNAITVRI 234
Query: 131 ALRSPENDPKLK-LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIE--KIETCVDIVRML 187
+ S + KL+ ++L + + SA L++ CL + +E ++E + +++ +
Sbjct: 235 MINSLCKEGKLQETSDMLNRIHGSRCSA----SLIVNACLIYRILEEGRVEDGITLLKRM 290
Query: 188 MSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNV 247
+ + + + + +++ + + S +E++ E+ +R + +
Sbjct: 291 LQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEM--------------SERGFQANSFI 336
Query: 248 HTFNALMVGFY-REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+T L +G + R G E+ + EM +G +P ++++L+ E + E
Sbjct: 337 YT---LFIGVHCRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCE 393
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+M ++ +N I CE G++ +A + G T+ +L+ GY ++G
Sbjct: 394 KMLERGFLPSCSVFNVAIAKICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKSG 453
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++ + +Y +M + P S LIG LC R+ EA LK V L P Y
Sbjct: 454 EIQEILKLYYEMGARLLSPGVSVFFALIGSLCQSGRLEEAEKYLKI-VKDSSLTPCLSIY 512
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKG 453
LI ++G +AL++ EM+ G
Sbjct: 513 QALILFYLKKGNRAKALELYNEMMFDG 539
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
S+ +++ + + R + +A L E + KN E + Y+ + +
Sbjct: 107 SFGIMIHILVKARLVLDARALLESILKKN-EGNSFDYSVV-------------DSLMDSY 152
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
++G SS F+ LV + +D A+ V + + +GF + LI + +
Sbjct: 153 EVTG--SSPFVFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDQN 210
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
+ I + ++++ ++P + +I LC+EGK++E + + G SL + +
Sbjct: 211 LKVWKIYE-QMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNAC 269
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQVRQED 493
I ++EG VE L K M + + +D
Sbjct: 270 LIYRILEEGRVEDGITLLKRMLQKNMVLDD 299
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 134/240 (55%), Gaps = 4/240 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V ++N ++ GF+ EG +K +++EM G PD +Y+ ++ C+ + + AE +
Sbjct: 191 PDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDV 247
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++M +K V+ + V YNTII G C+ E+ AE F++M GV+ S+VT+ +++G C+
Sbjct: 248 FQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCK 307
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A VD A V+ M +G +P+ T +I LC + + +A + + + K G+ P
Sbjct: 308 AQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDK-GVKPDNL 366
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I GLC+ ++ A V +M+ KG +P+ Y+ I GY+ G E KEM
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 130/249 (52%), Gaps = 5/249 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+N ++ G + ++ EDV+ +M G +P+ +Y+ ++ C+ + + AE
Sbjct: 221 VSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAE 280
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++++M DK V+ V YNTII G C+ + RAE F++M GV+ VT+ +++G
Sbjct: 281 GVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGL 340
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A +D A V+ M KG +P+ T ++I LC + V A + + + K G+ P
Sbjct: 341 CKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDK-GVKPN 399
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI G G+ EE ++ EM EP + Y +D K G A +
Sbjct: 400 NGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEA----R 455
Query: 483 EMFENQVRQ 491
+F++ +R+
Sbjct: 456 SLFDSMIRK 464
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 137/257 (53%), Gaps = 7/257 (2%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDV---WVEMARLGCEPDCYSYSVLMAVFCEERR 297
V R V ++N L+ G E+ ++ V+ C PD SY++++ F E +
Sbjct: 149 VGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQ 208
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ +A L+ EM V DVV YNTII G C+ E+ RAE+ F++M GV+ ++VT+
Sbjct: 209 VDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNT 265
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
+++G C+A +VD A V+ M KG +P T +I LC + V A + + +++
Sbjct: 266 IIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQ-QMIDR 324
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G+ P +Y +I GLC+ +++A V +M+ KG +P Y+ IDG K +V+ A
Sbjct: 325 GVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRA 384
Query: 478 TMLRKEMFENQVRQEDG 494
+ ++M + V+ +G
Sbjct: 385 EGVFQQMIDKGVKPNNG 401
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 122/238 (51%), Gaps = 1/238 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN FN+L+ G +EKVE++++EM G PD ++ ++ C+E R+ EA
Sbjct: 571 VTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEAR 630
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L + M ++ DV++YNT+I G C M A + M +G++ + V++ L++GY
Sbjct: 631 RLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGY 690
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+AG +D+A ++ +M RKG P T ++ L R EA + L ++K +
Sbjct: 691 CKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARE-LYVNMIKSRKLWS 749
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y ++ G C+ +EA K+ + + + ++ IDG K G E A L
Sbjct: 750 ICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDL 807
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 182/406 (44%), Gaps = 49/406 (12%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRS---PENDPKLKLFEVLVKTYRECGSAPFVFDL 163
+Y TII L +A+ I A V + + P+N + +
Sbjct: 332 TYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDN---------------------LTYTI 370
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI--------WE--VSRGKGVI 213
+I + +++++ E + + ++ +G+ T N LI WE V R K +
Sbjct: 371 IIDGLCKAQSVDRAEG---VFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKE-M 426
Query: 214 SGYEIYREVF--GLDSDATAGIGK--------DVKRVVRVRPNVHTFNALMVGFYREGAF 263
S +++ +VF GL D GK D ++P+V + ++ G+ ++GA
Sbjct: 427 SAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
++ D+ M G P+ ++ ++ + + + E ++ +M+ + + +VV Y T+
Sbjct: 487 SEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTL 546
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I C++G + A F +M GV ++V F LV G C + ++ +M +G
Sbjct: 547 IDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGI 606
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
P+ ++ LC + RV EA ++ + V GL P SY LI G C +M+EA+
Sbjct: 607 RPDIVFFNTVLCNLCKEGRVMEARRLIDSMVC-MGLKPDVISYNTLIDGHCFASRMDEAV 665
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
K+ MV G +P++ Y+ + GY K G ++ A L +EM V
Sbjct: 666 KLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGV 711
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 124/248 (50%), Gaps = 5/248 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN FN ++ + + ++V ++++M + G P+ +Y L+ C+ R+ +A
Sbjct: 501 ISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAV 560
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +M ++ V + V +N+++ G C + + + EE F EM G+ V F ++
Sbjct: 561 LQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNL 620
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G V A + + M G +P+ + LI C R+ EA+ +L +V GL P
Sbjct: 621 CKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDG-MVSAGLKPN 679
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY L+ G C+ G+++ A + EM+ KG P +E Y+ ++G + G A +
Sbjct: 680 IVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEA----R 735
Query: 483 EMFENQVR 490
E++ N ++
Sbjct: 736 ELYVNMIK 743
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/441 (20%), Positives = 194/441 (43%), Gaps = 72/441 (16%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND--PKLKLFEVLV---------- 148
C+ + SY T++ L R AR+++ + + ++ P + + +++
Sbjct: 151 CRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVD 210
Query: 149 KTYR---ECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
K Y E G +P V ++ +I + + +++ E D+ + ++ +G+ T N +I
Sbjct: 211 KAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAE---DVFQQMVEKGVKPNNVTYNTII 267
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
+ + + V +++++ + K VK P+ T+N ++ G + A
Sbjct: 268 DGLCKAQEVDMAEGVFQKM----------VDKGVK------PSNVTYNTIIDGLCKAQAV 311
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
++ E V+ +M G +PD +Y+ ++ C+ + + +AE ++++M DK V+ D + Y I
Sbjct: 312 DRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTII 371
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY--------------------- 362
I G C+ + RAE F++M GV+ ++ T+ L++GY
Sbjct: 372 IDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDL 431
Query: 363 --------------CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
C+ G + A +++ M RKG +P + +++ K + E D
Sbjct: 432 EPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHD 491
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+L V G+ P + + +I + ++E + + +M +G P++ Y ID
Sbjct: 492 LLNLMVAN-GISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDAL 550
Query: 469 MKEGNVEMATMLRKEMFENQV 489
K G V+ A + +M V
Sbjct: 551 CKLGRVDDAVLQFNQMINEGV 571
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 10/256 (3%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+V P+ T++ ++ F R G E + + + G D + L+ C+ +R+ EA
Sbjct: 79 KVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEA 138
Query: 302 -EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS----VTFE 356
L +M + VV+YNT++ G C+ A E M + G +SS V++
Sbjct: 139 MHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMM-VDGQDSSCSPDVVSYN 197
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
++NG+ G VD A ++ +M G P+ T +I LC + V A D+ + V K
Sbjct: 198 IVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEK 254
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G+ P +Y +I GLC+ +++ A V +MV KG +PS Y+ IDG K V+
Sbjct: 255 -GVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDR 313
Query: 477 ATMLRKEMFENQVRQE 492
A + ++M + V+ +
Sbjct: 314 AEGVFQQMIDRGVKPD 329
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+V ++N L+ G ++ + M G +P+ SY+ L+ +C+ R+ A
Sbjct: 641 LKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAY 700
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ EM K V V YNTI+ G G + A E + M S S T+ +++G+
Sbjct: 701 CLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGF 760
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ D A ++ +C + + T ++I L R +A+D+ A + GL P+
Sbjct: 761 CKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAA-IPANGLVPS 819
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y + + L EEG +EE + + M G P+ + +A I + G + A
Sbjct: 820 VVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRA 874
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 79/189 (41%), Gaps = 4/189 (2%)
Query: 210 KGVISGYEIYREVF-GLDSDATAGIGKDVK-RVVRVRP--NVHTFNALMVGFYREGAFEK 265
KGV G E Y + GL +++ +++ R ++ T++ ++ GF + F++
Sbjct: 709 KGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDE 768
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
++ + + + D ++++++ + R +A L+ + + VV Y I
Sbjct: 769 AFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAE 828
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
E G + + F M SG +S L+ G++ A + + K F
Sbjct: 829 NLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSL 888
Query: 386 EGSTIEVLI 394
E ST +LI
Sbjct: 889 EASTTSMLI 897
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 163/348 (46%), Gaps = 26/348 (7%)
Query: 141 LKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
LK+ +V+V+ G P F +++++ C + +E+ + I+ ++ RG ++T
Sbjct: 306 LKVMDVMVQE----GHDPDVFTYNIVVNCLCKNGQLEEAKG---ILNQMVDRGCLPDITT 358
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
N LI + G + ++ R+V V V P+V+TFN L+
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQV----------------TVKGVSPDVYTFNILINALC 402
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ G ++ EM GC PD +Y+ L+ C ++ +A L ++M +
Sbjct: 403 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTI 462
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
YNTII G C+ + AEE F +M L G+ +++TF L++G C+ +D A + N M
Sbjct: 463 TYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQM 522
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+G +P T ++ C + + +A DIL+ G +Y LI GLC+ G+
Sbjct: 523 ISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTAN-GFEVDVVTYGTLINGLCKAGR 581
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ ALKV M KG P+ + Y+ + + N+ A L +EM E
Sbjct: 582 TQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 629
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 123/243 (50%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N ++ + G E+ + + +M GC PD +++ L+A C R+ EA L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ K V DV +N +I C++G+ A F EM SG VT+ L++ C
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A+ + DM G T +I LC K R+ EA ++ ++ G+
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ-GISRNAI 497
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI GLC++ K+++A + +M+ +G +P+ Y++ + Y K+G+++ A + + M
Sbjct: 498 TFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557
Query: 485 FEN 487
N
Sbjct: 558 TAN 560
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 146/325 (44%), Gaps = 20/325 (6%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
V++ L+ +E ++ +E+ + + +RG+ V T N L+ K + +++
Sbjct: 148 VYNHLLNVLVEGSKMKLLES---VYSEMGARGIKPDVVTFNTLM------KALCRAHQVR 198
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
V L+ ++ G+ P+ TF LM GF EG+ E V M +GC
Sbjct: 199 TAVLMLEEMSSRGVA----------PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCS 248
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
+ +VL+ +C+ R+ +A ++ E D + YNT + G C+ + A +
Sbjct: 249 ATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKV 308
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
M G + T+ +VN C+ G ++ A + N M +G P+ +T LI LC
Sbjct: 309 MDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCT 368
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
R+ EALD+ + VK G+ P ++ LI LC+ G AL++ EM G P
Sbjct: 369 GNRLEEALDLARQVTVK-GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEV 427
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ ID G + A L K+M
Sbjct: 428 TYNTLIDNLCSLGKLGKALDLLKDM 452
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 124/244 (50%), Gaps = 7/244 (2%)
Query: 245 PNVHTFNALMVGFYRE---GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
P+ T+N + G + G KV DV V+ G +PD ++Y++++ C+ ++ EA
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQE---GHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ + +M D+ D+ +NT+I C + A + R++ + GV TF L+N
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ GD A+ ++ +M G P+ T LI LC ++ +ALD+LK + G
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK-DMESTGCPR 459
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ +Y +I GLC++ ++EEA +V +M +G + ++ IDG K+ ++ A L
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLI 519
Query: 482 KEMF 485
+M
Sbjct: 520 NQMI 523
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 1/274 (0%)
Query: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
GV+ + E L DA I ++ + ++ + +N L+ + +E V+
Sbjct: 110 GVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVY 169
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
EM G +PD +++ LM C ++R A + EEM + V D + T++ GF E
Sbjct: 170 SEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEE 229
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G + A M G ++ VT L+NGYC+ G V+ A+ GFEP+ T
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+ LC V AL ++ +V+ G P +Y ++ LC+ G++EEA + +MV
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDV-MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+G P + ++ I +E A L +++
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 6/242 (2%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMAR--LGCEPDCYSYSVLMAVFCEERRMREAEKL 304
VH+F + + + F+ D+ + + G + D Y+ L+ V E +M+ E +
Sbjct: 112 VHSF---LDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESV 168
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM + ++ DVV +NT++ C ++ A EM GV TF L+ G+
Sbjct: 169 YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVE 228
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +++A+ V M G T+ VLI C RV +AL ++ + G P +
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQI 287
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y + GLC+ + ALKV MV +G +P + Y+ ++ K G +E A + +M
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 485 FE 486
+
Sbjct: 348 VD 349
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 155/377 (41%), Gaps = 46/377 (12%)
Query: 22 LLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFS----QI 77
+L+Q P + LIA +L T +R + + + G++P ++
Sbjct: 343 ILNQMVDRGCLPDITTFNTLIA---ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399
Query: 78 ALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN 137
AL +PHLALR F ++ S C +Y T+I L +G A D+++ +
Sbjct: 400 ALCKVGDPHLALRLFEEMKN-SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG-- 456
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
C + ++ +I + IE+ E D + + +G+S
Sbjct: 457 ----------------CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL---QGISRNAI 497
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T N LI + + K + + + ++ + G+ +PN T+N+++ +
Sbjct: 498 TFNTLIDGLCKDKKIDDAFGLINQMI------SEGL----------QPNNITYNSILTHY 541
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
++G +K D+ M G E D +Y L+ C+ R + A K+ MR K +
Sbjct: 542 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTP 601
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD-VDSAILVYN 376
AYN ++ + A FREM G ++T++ + G CR G + A
Sbjct: 602 KAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFML 661
Query: 377 DMCRKGFEPEGSTIEVL 393
+M KGF PE S+ +L
Sbjct: 662 EMVDKGFIPEFSSFRML 678
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 152/357 (42%), Gaps = 42/357 (11%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIR---VALRSPE--------------NDP--KL 141
C ++++ T+I L + A D+ R V SP+ DP L
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
+LFE + + C ++ LI + ++ K+ +D+++ + S G T N
Sbjct: 412 RLFEEMKNS--GCTPDEVTYNTLID---NLCSLGKLGKALDLLKDMESTGCPRSTITYNT 466
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
+I + + + E++ ++ D++ + R N TFN L+ G ++
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQM-------------DLQGISR---NAITFNTLIDGLCKDK 510
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ + +M G +P+ +Y+ ++ +C++ +++A + E M E DVV Y
Sbjct: 511 KIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYG 570
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
T+I G C+ G A + R M + G+ + + ++ R ++ A+ ++ +M
Sbjct: 571 TLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 630
Query: 382 GFEPEGSTIEVLIGELC-DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
G P+ T +++ LC + EA D + V K G P S+ L +GL G
Sbjct: 631 GEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK-GFIPEFSSFRMLAEGLLNLG 686
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 130/513 (25%), Positives = 226/513 (44%), Gaps = 61/513 (11%)
Query: 16 PKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFS 75
P +L+ + S P+ +S+N++ + L++ + K N + + PT F+
Sbjct: 156 PGQTTRLMLEMRNVYSCEPTFKSYNVVLEI--LVSGNCHKVAANVFYDMLSRKIPPTLFT 213
Query: 76 ----QIALGLKNNPHLALRFF-SFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRV 130
AL N AL T+H C + Y T+IH LS+ + A ++
Sbjct: 214 FGVVMKALCAVNEVDSALSVLRDMTKHG--CVPNSVIYQTLIHSLSKCNRVNEALQLLEE 271
Query: 131 ALRS---PENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRML 187
P+ + + L K R +A V +LI+ T DI
Sbjct: 272 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF----------TPDDITYGY 321
Query: 188 MSRGLSV--KVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
+ GL +V L + + + VI I+ V D + D+ + P
Sbjct: 322 LMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 381
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV------------------ 287
+V T+N+L+ G++++G +V +M GC+P+ YSY++
Sbjct: 382 DVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLL 441
Query: 288 -----------------LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
L++ FC+E R+ EA +++ EM K + DV +N++I G CE+
Sbjct: 442 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 501
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
E+ A R+M GV +++VT+ L+N + R G++ A + N+M +G + T
Sbjct: 502 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITY 561
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
LI LC V +A + + ++++ GL P+ S LI GLC G +EEA++ Q EMV
Sbjct: 562 NSLIKGLCRAGEVDKARSLFE-KMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMV 620
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMA-TMLRK 482
+G P + +++ I+G + G +E TM RK
Sbjct: 621 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 653
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 125/251 (49%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN FN L+ F +E + +++ EM R GC+PD Y+++ L++ CE ++ A
Sbjct: 449 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 508
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +M + V + V YNT+I F GE+ A + EM G +T+ L+ G
Sbjct: 509 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGL 568
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRAG+VD A ++ M R G P + +LI LC V EA++ K V++ G P
Sbjct: 569 CRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLR-GSTPD 627
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ LI GLC G++E+ L + ++ +G P Y+ + K G V A +L
Sbjct: 628 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLD 687
Query: 483 EMFENQVRQED 493
E E+ D
Sbjct: 688 EGIEDGFVPND 698
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 69/180 (38%), Gaps = 10/180 (5%)
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
K H Y +IG GE + +M G+ F ++ Y +AG
Sbjct: 99 KGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQ 158
Query: 371 AILVYNDM-----CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+ +M C F+ +E+L+ C K D+L ++ PT +
Sbjct: 159 TTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIP-----PTLFT 213
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+ ++K LC +++ AL V +M G P+ IY I K V A L +EMF
Sbjct: 214 FGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 273
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 223/494 (45%), Gaps = 53/494 (10%)
Query: 22 LLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTP--TQFSQIAL 79
LL+ + + P + LI+ + R+K+ + +S SG P +S +A
Sbjct: 67 LLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVS---SGFVPDVVTYSILAD 123
Query: 80 GLKNNPHLALRFFSFTQHKSL--CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN 137
GL + F + S C +L +Y T+I L +A +
Sbjct: 124 GLCKRGRID-EAFELVKEMSGNGCTPNLVTYNTLIDGLCKA----------------SKT 166
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLI---KCCLEVKNIEKIETCVDIVRMLMSRGLSV 194
+ +L E LV + G P V I C E +++ + +V ++ RG +
Sbjct: 167 EKAYELLETLVSS----GFVPDVVTYTIIVDGLCKE----GRLDKALKMVEGMLKRGCTP 218
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREVFGLD--SDATAGIG-----------KDVKRVV 241
V T AL+ + R V + I++E+ D +DA A + K+ ++VV
Sbjct: 219 SVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV 278
Query: 242 ---RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
R P + +NALM G+ +EG +++ +V+ +MA GC P+ +Y+++M C+ ++
Sbjct: 279 DGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKV 338
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EA E M DVV+YN II G + + A + +M +G+ +VT+ L
Sbjct: 339 DEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 398
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+ +C+ D A+ + +M + G +P+ T LI L R+ +A +++ +
Sbjct: 399 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 458
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ +Y +I LC+EG +++AL + M G G E + Y+ FID KEG ++ A+
Sbjct: 459 VVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEAS 518
Query: 479 MLRKEMFENQVRQE 492
L EM + +R E
Sbjct: 519 SLLSEM--DTLRDE 530
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 123/243 (50%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+V P+V T+N L+ G + +K ++ EM G PD +++ +M C+ + A
Sbjct: 5 KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 64
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L M ++N YNT+I G C+ + RA+ E SG VT+ L +G
Sbjct: 65 HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADG 124
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G +D A + +M G P T LI LC + +A ++L+ +V G P
Sbjct: 125 LCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLET-LVSSGFVP 183
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y ++ GLC+EG++++ALK+ M+ +G PS+ Y+A ++G + G V+ A +
Sbjct: 184 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 243
Query: 482 KEM 484
KEM
Sbjct: 244 KEM 246
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 123/235 (52%), Gaps = 1/235 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ TFN++M G + G FE+ + MA C P C +Y+ L++ C+++ + A+
Sbjct: 41 VTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAK 100
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +E DVV Y+ + G C+ G + A E +EM +G + VT+ L++G
Sbjct: 101 TLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGL 160
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A + A + + GF P+ T +++ LC + R+ +AL +++ ++K G P+
Sbjct: 161 CKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEG-MLKRGCTPS 219
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y L++GLC G+++EA + EMV K Y + ++GY K + A
Sbjct: 220 VITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA 274
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 1/207 (0%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD ++Y++L+ C+ + +A ++ EM D+ V D V +N+I+ G C+ G+ RA
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
M S T+ L++G C+ +VD A + ++ GF P+ T +L LC
Sbjct: 68 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+ R+ EA +++K + G P +Y LI GLC+ K E+A ++ +V GF P +
Sbjct: 128 RGRIDEAFELVK-EMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVV 186
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFE 486
Y+ +DG KEG ++ A + + M +
Sbjct: 187 TYTIIVDGLCKEGRLDKALKMVEGMLK 213
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M ++ V DV YN +I G C+ + +A E EM GV +VTF +++G C+AG
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+ A + M + P T LI LC ++ V A L V G P +Y
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRA-KTLVDEFVSSGFVPDVVTYS 119
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
L GLC+ G+++EA ++ EM G G P+L Y+ IDG K E A
Sbjct: 120 ILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKA 169
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 7/268 (2%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE-PDCYSYS 286
D GI K++ + V P+ T+N L+ G + ++ EM R GC C +Y+
Sbjct: 409 DDAVGILKNMIKA-GVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 467
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ C+E +++A L + M VE + V YN I C+ G + A EM
Sbjct: 468 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM--- 524
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR-KGFEPEGSTIEVLIGELCDKRRVFE 405
V++ ++ G C+A +D A + +M KG T +LI +R+ E
Sbjct: 525 DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDE 584
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
AL +L+ +V+ G P+ +Y +I LC+ K+++A ++ EM +G S Y+ I
Sbjct: 585 ALTLLEL-MVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLI 643
Query: 466 DGYMKEGNVEMATMLRKEMFENQVRQED 493
G +G + A + +EM + +D
Sbjct: 644 YGLCGQGRGKEALQVLEEMASSDCEIDD 671
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ L++G C+A D A + ++M +G P+ T ++ LC K FE L A
Sbjct: 12 TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLC-KAGKFERAHSLLAV 70
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+ + P+ +Y LI GLC++ ++ A + E V GF P + YS DG K G
Sbjct: 71 MAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGR 130
Query: 474 VEMATMLRKEMFEN 487
++ A L KEM N
Sbjct: 131 IDEAFELVKEMSGN 144
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARL-GCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
++ +++G + ++ + EM + G +++++L+ F + +R+ EA L E
Sbjct: 532 SYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLEL 591
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M + V+ YN +I C++ ++ +A E F EM + G+ +SSV++ L+ G C G
Sbjct: 592 MVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGR 651
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
A+ V +M E + L L + R EA ++L+ K
Sbjct: 652 GKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTKM 701
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y LI GLC+ K ++A ++ EMV +G P +++ +DG K G E A L
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 481 RKEMFENQVR 490
M E R
Sbjct: 68 LAVMAERNCR 77
>gi|449445200|ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cucumis sativus]
Length = 517
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 209/461 (45%), Gaps = 30/461 (6%)
Query: 31 STPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS----GLTPTQFSQIALGLKN--N 84
S P +D+ N ATV S+ + W+ +L R L ++ L + +
Sbjct: 6 SIPVADKLINDDATVNSICDSLTRRQSWD---TLSRKFQFLELNDFLVQKVLLKFQQPVD 62
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPE-NDPKLKL 143
AL FF ++ + H S+ +IHIL +ARL+ AR ++ L+ E N +
Sbjct: 63 AKRALGFFHWSAKRKNFNHGPQSFGIMIHILVKARLVLDARALLESILKKNEGNSFDYSV 122
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
+ L+ +Y GS+PFVFDLL++ C +++ I+ CV L RG S+ + + N LI
Sbjct: 123 VDSLMDSYEVTGSSPFVFDLLVQTCAKLRLID-FALCV--CSHLEERGFSLSLISFNTLI 179
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
V + + ++IY ++ +++ RV PN T ++ +EG
Sbjct: 180 HVVEKSDENLKVWKIYEQM--------------IRK--RVYPNAITVRIMINSLCKEGKL 223
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
++ D+ + C + L+ EE R+ + L + M KN+ D +AY+ I
Sbjct: 224 QETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGITLLKRMLQKNMVLDDIAYSLI 283
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
+ + G + E F EM G +++S + + +CR G V+ A + +M G
Sbjct: 284 VYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVHCRGGKVEEAHCLMQEMENMGL 343
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
+P T +LI E C E + + ++++ G P+ + I +CE+G +++A
Sbjct: 344 KPYPETFNLLI-EGCAISGHSEEILSMCEKMLERGFLPSCSVFNVAIDKICEKGDVKKAN 402
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ ++ KGF P Y+ I GY K G ++ L EM
Sbjct: 403 ALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEILKLYYEM 443
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 164/387 (42%), Gaps = 50/387 (12%)
Query: 86 HLALRFFSFTQHKSLCKHSLSSYATIIHILSRA---------------RLIGPARDVIRV 130
HL R FS SL S+ T+IH++ ++ + + P +R+
Sbjct: 162 HLEERGFSL---------SLISFNTLIHVVEKSDENLKVWKIYEQMIRKRVYPNAITVRI 212
Query: 131 ALRSPENDPKLK-LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIE--KIETCVDIVRML 187
+ S + KL+ ++L + + SA L++ CL + +E ++E + +++ +
Sbjct: 213 MINSLCKEGKLQETSDMLNRIHGSRCSAS----LIVNACLIYRILEEGRVEDGITLLKRM 268
Query: 188 MSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNV 247
+ + + + + +++ + + S +E++ E+ +R + +
Sbjct: 269 LQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEM--------------SERGFQANSFI 314
Query: 248 HTFNALMVGFY-REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+T L +G + R G E+ + EM +G +P ++++L+ E + E
Sbjct: 315 YT---LFIGVHCRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCE 371
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+M ++ +N I CE G++ +A + G T+ +L+ GY ++G
Sbjct: 372 KMLERGFLPSCSVFNVAIDKICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKSG 431
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++ + +Y +M + P S LIG LC R+ EA LK V L P Y
Sbjct: 432 EIQEILKLYYEMGARLLSPGVSVFFALIGSLCQSGRLEEAEKYLKI-VKDSSLTPCLSIY 490
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKG 453
LI ++G +AL++ EM+ G
Sbjct: 491 QALILLYLKKGNRAKALELYNEMMFDG 517
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 21/212 (9%)
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
S+ +++ + + R + +A L E + KN E + Y+ + +
Sbjct: 85 SFGIMIHILVKARLVLDARALLESILKKN-EGNSFDYSVV-------------DSLMDSY 130
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
++G SS F+ LV + +D A+ V + + +GF + LI + +
Sbjct: 131 EVTG--SSPFVFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVV---EKS 185
Query: 404 FEALDILKA--RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
E L + K ++++ ++P + +I LC+EGK++E + + G SL +
Sbjct: 186 DENLKVWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVN 245
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+ I ++EG VE L K M + + +D
Sbjct: 246 ACLIYRILEEGRVEDGITLLKRMLQKNMVLDD 277
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 142/251 (56%), Gaps = 2/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV+T+N L+ G E+ V +M GC P+ +Y+ L+A FC + AE
Sbjct: 6 VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAE 65
Query: 303 KLWEEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++ MR++ N + ++V +N+++ G C+ G M A + F EM G+ V++ L++G
Sbjct: 66 RVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSG 125
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC+ G + ++ V+++M ++G P+ T LI C + +A+ ++ A++ + GL
Sbjct: 126 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALV-AQMRERGLRM 184
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
E ++ LI G C++G +++AL EM G +PS+ Y+A I+GY K G +++A L
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244
Query: 482 KEMFENQVRQE 492
+EM +V+ +
Sbjct: 245 REMEAKRVKPD 255
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 134/241 (55%), Gaps = 1/241 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TF +L+ + G E+ + +M G + +++ L+ FC++ + +A
Sbjct: 149 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 208
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EEMR ++ VV YN +I G+C++G M A E REM V+ VT+ +++GYC+
Sbjct: 209 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 268
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G++DSA + M +KG P+ T LI LC+++R+ +A ++ + +++ G+ P E
Sbjct: 269 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE-NMLQLGVQPDEF 327
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C+EG +E+AL + EM+ KG P + YS I+G K + A L ++
Sbjct: 328 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 387
Query: 485 F 485
+
Sbjct: 388 Y 388
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 134/280 (47%), Gaps = 34/280 (12%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN+ TFN+++ G + G E V+ EM R G PD SY+ L++ +C+ + E+
Sbjct: 78 KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLA 137
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ EM + + DVV + ++I C+ G + +A +M G+ + VTF L++G+C
Sbjct: 138 VFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFC 197
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI-------------- 409
+ G +D A+L +M + G +P LI C R+ A ++
Sbjct: 198 KKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 257
Query: 410 --------------------LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
L +++K G+ P +Y LI+GLCEE ++ +A ++ M
Sbjct: 258 TYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 317
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ G +P Y+ IDG+ KEGNVE A L EM V
Sbjct: 318 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 357
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 194/432 (44%), Gaps = 52/432 (12%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
A R S + + K +L ++ ++++ L +A + AR V +R P + + L
Sbjct: 64 AERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLA-PDVVSYNTL 122
Query: 148 VKTYRECGS----------------APFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMS 189
+ Y + G P V F LI + N+E+ V +V +
Sbjct: 123 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA---VALVAQMRE 179
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
RGL + T ALI + KG + DA + + R ++P+V
Sbjct: 180 RGLRMNEVTFTALIDGFCK-KGFLD-------------DALLAV--EEMRKCGIQPSVVC 223
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+NAL+ G+ + G + ++ EM +PD +YS +++ +C+ + A +L ++M
Sbjct: 224 YNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKML 283
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K V D + Y+++I G CE + A E F M GV+ T+ L++G+C+ G+V+
Sbjct: 284 KKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVE 343
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA-------------LDILKARVVK 416
A+ ++++M RKG P+ T VLI L R EA D +K +
Sbjct: 344 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 403
Query: 417 FGLFPTE-KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
E KS + L+KG C +G M+EA KV M+ + ++ +YS I G+ + GNV
Sbjct: 404 LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 463
Query: 476 MATMLRKEMFEN 487
A K+M +
Sbjct: 464 KALSFHKQMLRS 475
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 115/215 (53%), Gaps = 6/215 (2%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M R G P+ Y+Y++L+ C R+ EA + +MR + V YNT++ FC GE
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 333 MARAE---EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
+ AE RE G + + VTF +VNG C+AG ++ A V+++M R+G P+ +
Sbjct: 61 LDGAERVVSLMREEG--NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVS 118
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
L+ C + E+L + + + + GL P ++ LI C+ G +E+A+ + A+M
Sbjct: 119 YNTLLSGYCKVGCLHESLAVF-SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 177
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+G + ++A IDG+ K+G ++ A + +EM
Sbjct: 178 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 212
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 16/230 (6%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+ T+ L+ G +EG EK + EM R G PD +YSVL+ + R +EA
Sbjct: 322 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 381
Query: 303 KLWEEMRDKNVEHDVVAYNTI---------------IGGFCEIGEMARAEEFFREMGLSG 347
+L ++ ++ D + Y+ + + GFC G M A++ ++ M
Sbjct: 382 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 441
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ + L++G+CR G+V A+ + M R GF P ++ L+ L ++ V EA
Sbjct: 442 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 501
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+ ++ + L E S LI +EG ++ + V M G PS
Sbjct: 502 NAIQDLLTCCPLADAEASKA-LIDLNRKEGNVDALIDVLCGMARDGLLPS 550
>gi|357495705|ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493156|gb|AES74359.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 846
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 133/515 (25%), Positives = 230/515 (44%), Gaps = 75/515 (14%)
Query: 33 PPSDQSHN---LIATVVSLLTHHRS--KSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHL 87
PP+ +N LI+T + + H S ++++ +L L + S++ + +++
Sbjct: 65 PPTHNPNNIVNLISTALKQKSFHLSHFQTQFKTILP----HLGAHEISRVLIRTQSDASS 120
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI--RVALRSPENDPKLKLFE 145
AL FF++ ++ SL +Y I+HIL ++ A ++ + L + +++
Sbjct: 121 ALTFFNWVKNDLRFTLSLQNYCLIVHILGWNQIFDQAMKLLCELIQLNNVNVVSYDDVYK 180
Query: 146 VLVKTYRECGSAPFVFDLLIKCCLEVKNIEK-IETCVDIVRMLMSRGLSVKVSTCNALIW 204
L+ +C P +FD+LIK +++ +EK +ET V V CN L+
Sbjct: 181 CLIDCTEDCNWNPVIFDMLIKAYVKLGMVEKGLETFWKNVE----GSFVPNVVACNCLLN 236
Query: 205 EVSRGKGVISGYEIYREVFGL--------------------DSDATAGIGKDVKRVVRVR 244
+S+ + +E+Y E+ L DSD G + ++
Sbjct: 237 GLSKINYIGECWEVYEEMGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKMEEE-GFE 295
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G+ ++ E ++ M G P+ SYS LM C+E +++EA +L
Sbjct: 296 PDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQL 355
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFC-EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ +M + ++ DVV+YNT+I G+C E G+M EM G+ +VT + GY
Sbjct: 356 FNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYT 415
Query: 364 RAGDVDSAILVYNDM-------------------CRKG-----------------FEPEG 387
R G + SA+ + ++ C++G + PE
Sbjct: 416 REGKLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQDGDYVPEM 475
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
ST L LC V EAL ILK+ + K + +Y +I LC + EA +
Sbjct: 476 STYIKLAESLCSFNNVEEAL-ILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLE 534
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
EMV G P LEI A I+GY +E +V+ A L K
Sbjct: 535 EMVSLGILPDLEIKRALINGYCEENDVDKAVSLLK 569
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 2/218 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ +RP+ T + G+ REG ++ E+ R G + Y L+ C+E R
Sbjct: 398 IGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFA 457
Query: 301 AEKLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
A + +D + ++ Y + C + A EM ++ + T++ ++
Sbjct: 458 ARSFLIRISQDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAII 517
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+ CR A + +M G P+ LI C++ V +A+ +LK +F +
Sbjct: 518 SCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQV 577
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+ TE SY ++K CE G + E +++Q ++V G+ P+
Sbjct: 578 YDTE-SYNAIVKVFCEVGNVAELMELQDKLVKIGYVPN 614
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 110/261 (42%), Gaps = 22/261 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATAGI 233
K++ C ++ ++ G+ TC + +R ++S + E+ FG
Sbjct: 384 KMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQRFG--------- 434
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVF 292
+++ N++ + L+V +EG + +++ G P+ +Y L
Sbjct: 435 -------IKIPENLYDY--LLVALCKEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESL 485
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C + EA L EM K+++ ++ Y II C + + AE EM G+
Sbjct: 486 CSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDL 545
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
L+NGYC DVD A+ + ++ + + ++ C+ V E ++ L+
Sbjct: 546 EIKRALINGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIVKVFCEVGNVAELME-LQD 604
Query: 413 RVVKFGLFPTEKSYMFLIKGL 433
++VK G P + ++I+GL
Sbjct: 605 KLVKIGYVPNSLTCKYVIRGL 625
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 148/304 (48%), Gaps = 17/304 (5%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
RGL V + N LI + V G+ + K V RV P+V T
Sbjct: 171 RGLRPTVVSFNTLISGCCKAGAVEEGFRL----------------KGVMESERVCPDVFT 214
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F+AL+ G +EG ++ ++ EM G P+ +++VL+ C+ ++ A K ++ M
Sbjct: 215 FSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMML 274
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ V D+V YN +I G C++G++ A EM SG+ +TF L++G C+ GD++
Sbjct: 275 AQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDME 334
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
SA+ + M +G E + VLI LC RV +A +L+ ++ G P + +Y +
Sbjct: 335 SALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLR-DMLSAGFKPDDPTYTMV 393
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ C++G + K+ EM G P + Y+A ++G K+G V+ A ML M V
Sbjct: 394 VDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGV 453
Query: 490 RQED 493
D
Sbjct: 454 APND 457
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 136/262 (51%), Gaps = 26/262 (9%)
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
++RVVR+RP V R AF ++E+ G P+ + ++VLM FC+
Sbjct: 112 LRRVVRLRP---------VELERSWAF------YLEVLDSGYPPNFFFFNVLMHGFCKVG 156
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV--- 353
+ A +++E+ + + VV++NT+I G C+ G + EE FR G+ +ES V
Sbjct: 157 GVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAV---EEGFRLKGV--MESERVCPD 211
Query: 354 --TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
TF L+NG C+ G +D L++++MC KG P G T VLI C +V AL +
Sbjct: 212 VFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQ 271
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ + G+ P +Y LI GLC+ G ++EA ++ EM G P ++ IDG K
Sbjct: 272 MMLAQ-GVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKY 330
Query: 472 GNVEMATMLRKEMFENQVRQED 493
G++E A +++ M E + +D
Sbjct: 331 GDMESALEIKRRMVEEGIELDD 352
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 118/249 (47%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN FN LM GF + G V+ E+ + G P S++ L++ C+ + E +L
Sbjct: 140 PNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRL 199
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M + V DV ++ +I G C+ G + F EM G+ + VTF L++G C+
Sbjct: 200 KGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCK 259
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G VD A+ + M +G P+ T LI LC + EA ++ GL P
Sbjct: 260 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSAS-GLRPDRI 318
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI G C+ G ME AL+++ MV +G E ++ I G ++G V A + ++M
Sbjct: 319 TFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDM 378
Query: 485 FENQVRQED 493
+ +D
Sbjct: 379 LSAGFKPDD 387
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K++ + +M++++G+ + T NALI + + + + E+ + +G+
Sbjct: 262 KVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEM------SASGL-- 313
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
RP+ TF L+ G + G E ++ M G E D +++VL++ C +
Sbjct: 314 --------RPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRD 365
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ +AE++ +M + D Y ++ FC+ G + + +EM G VT+
Sbjct: 366 GRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTY 425
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
L+NG C+ G V +A ++ + M G P T +L+
Sbjct: 426 NALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILL 464
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
F L+ G R+G E + +M G +PD +Y++++ FC++ + KL +EM
Sbjct: 354 AFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEM 413
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG-- 366
+ VV YN ++ G C+ G++ A+ M GV + +T+ L+ G+ + G
Sbjct: 414 QSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSS 473
Query: 367 -DVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
DVD ++N KG + ++ L+ E
Sbjct: 474 VDVD----IFNS--EKGLVKDYASYTALVNE 498
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 78/186 (41%), Gaps = 19/186 (10%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
F LI C + ++E + ++I R ++ G+ + LI + R V +
Sbjct: 319 TFTTLIDGCCKYGDME---SALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERML 375
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
R++ +AG +P+ T+ ++ F ++G + EM G
Sbjct: 376 RDML------SAGF----------KPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHV 419
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P +Y+ LM C++ +++ A+ L + M + V + + YN ++ G + G + F
Sbjct: 420 PGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVDIF 479
Query: 340 FREMGL 345
E GL
Sbjct: 480 NSEKGL 485
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 185/410 (45%), Gaps = 29/410 (7%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
+L SY T+IH L +++ A+ +I+V + +F + +T S +VF
Sbjct: 1 TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFSG 60
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
LI LE + C + R V TC ++ + + K + Y E+
Sbjct: 61 LITAYLESGFLRDAIECYRLTR---EHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 117
Query: 224 GLD----------------SDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFE 264
D I + V + +RP+V ++N LM G+ R G +
Sbjct: 118 ECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 177
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ + M G +PD Y+YSVL+ C+E ++ +A +L++EM K + + V + T+I
Sbjct: 178 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLI 237
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M KG +
Sbjct: 238 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLK 297
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P+ T LI C + A + K R+++ + Y LI GLC EG +A K
Sbjct: 298 PDKITYTTLIDGCCKDGDLDTAFEHRK-RMIQENTRLDDVVYTALISGLCREGXSVDAEK 356
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+ EM+ G +P Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 357 MLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM------QRDG 400
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ G ++G ++ + EM+ G +PD +Y+ L+ C++ + A
Sbjct: 261 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAF 320
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +N D V Y +I G C G AE+ REM G++ + T+ ++N +
Sbjct: 321 EHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEF 380
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ GDV + +M R G P T VL+
Sbjct: 381 CKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 412
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + + + +D + G+
Sbjct: 245 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL------IDEMSMKGL-- 296
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G ++G AFE + + E RL D Y+ L++
Sbjct: 297 --------KPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRL----DDVVYTALISG 344
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C E +AEK+ EM ++ D Y II FC+ G++ + + +EM G S
Sbjct: 345 LCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 404
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 405 VVTYNVLMNG 414
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 163/348 (46%), Gaps = 26/348 (7%)
Query: 141 LKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
LK+ +V+V+ G P F +++++ C + +E+ + I+ ++ RG ++T
Sbjct: 214 LKVMDVMVQE----GHDPDVFTYNIVVNCLCKNGQLEEAKG---ILNQMVDRGCLPDITT 266
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
N LI + G + ++ R+V V V P+V+TFN L+
Sbjct: 267 FNTLIAALCTGNRLEEALDLARQV----------------TVKGVSPDVYTFNILINALC 310
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ G ++ EM GC PD +Y+ L+ C ++ +A L ++M +
Sbjct: 311 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTI 370
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
YNTII G C+ + AEE F +M L G+ +++TF L++G C+ +D A + N M
Sbjct: 371 TYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQM 430
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+G +P T ++ C + + +A DIL+ G +Y LI GLC+ G+
Sbjct: 431 ISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTAN-GFEVDVVTYGTLINGLCKAGR 489
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ ALKV M KG P+ + Y+ + + N+ A L +EM E
Sbjct: 490 TQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 537
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 124/243 (51%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N ++ + G E+ + + +M GC PD +++ L+A C R+ EA L
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 286
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ K V DV +N +I C++G+ A F EM SG VT+ L++ C
Sbjct: 287 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 346
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A+ + DM G T +I LC K R+ EA ++ ++ G+
Sbjct: 347 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ-GISRNAI 405
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI GLC++ K+++A ++ +M+ +G +P+ Y++ + Y K+G+++ A + + M
Sbjct: 406 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 465
Query: 485 FEN 487
N
Sbjct: 466 TAN 468
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 132/296 (44%), Gaps = 17/296 (5%)
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVH 248
+RG+ V T N L+ K + +++ V L+ ++ G+ P+
Sbjct: 82 ARGIKPDVVTFNTLM------KALCRAHQVRTAVLMLEEMSSRGVA----------PDET 125
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
TF LM GF EG+ E V M +GC + +VL+ +C+ R+ +A ++
Sbjct: 126 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 185
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
E D + YNT + G C+ + A + M G + T+ +VN C+ G +
Sbjct: 186 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 245
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A + N M +G P+ +T LI LC R+ EALD+ + VK G+ P ++
Sbjct: 246 EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK-GVSPDVYTFNI 304
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LI LC+ G AL++ EM G P Y+ ID G + A L K+M
Sbjct: 305 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 360
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 1/274 (0%)
Query: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
GV+ + E L DA I ++ + ++ + +N L+ + +E V+
Sbjct: 18 GVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVY 77
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
EM G +PD +++ LM C ++R A + EEM + V D + T++ GF E
Sbjct: 78 SEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEE 137
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G + A M G ++ VT L+NGYC+ G V+ A+ GFEP+ T
Sbjct: 138 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 197
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+ LC V AL ++ +V+ G P +Y ++ LC+ G++EEA + +MV
Sbjct: 198 NTFVNGLCQNDHVGHALKVMDV-MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 256
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+G P + ++ I +E A L +++
Sbjct: 257 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 290
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 124/244 (50%), Gaps = 7/244 (2%)
Query: 245 PNVHTFNALMVGFYRE---GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
P+ T+N + G + G KV DV V+ G +PD ++Y++++ C+ ++ EA
Sbjct: 192 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQE---GHDPDVFTYNIVVNCLCKNGQLEEA 248
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ + +M D+ D+ +NT+I C + A + R++ + GV TF L+N
Sbjct: 249 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 308
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ GD A+ ++ +M G P+ T LI LC ++ +ALD+LK + G
Sbjct: 309 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK-DMESTGCPR 367
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ +Y +I GLC++ ++EEA +V +M +G + ++ IDG K+ ++ A L
Sbjct: 368 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 427
Query: 482 KEMF 485
+M
Sbjct: 428 NQMI 431
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 6/242 (2%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMAR--LGCEPDCYSYSVLMAVFCEERRMREAEKL 304
VH+F + + + F+ D+ + + G + D Y+ L+ V E +M+ E +
Sbjct: 20 VHSF---LDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESV 76
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM + ++ DVV +NT++ C ++ A EM GV TF L+ G+
Sbjct: 77 YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVE 136
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +++A+ V M G T+ VLI C RV +AL ++ + G P +
Sbjct: 137 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQI 195
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y + GLC+ + ALKV MV +G +P + Y+ ++ K G +E A + +M
Sbjct: 196 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 255
Query: 485 FE 486
+
Sbjct: 256 VD 257
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 156/377 (41%), Gaps = 46/377 (12%)
Query: 22 LLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFS----QI 77
+L+Q P + LIA +L T +R + + + G++P ++
Sbjct: 251 ILNQMVDRGCLPDITTFNTLIA---ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 307
Query: 78 ALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN 137
AL +PHLALR F ++ S C +Y T+I L +G A D+++ +
Sbjct: 308 ALCKVGDPHLALRLFEEMKN-SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG-- 364
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
C + ++ +I + IE+ E D + + +G+S
Sbjct: 365 ----------------CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL---QGISRNAI 405
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T N LI + + K + +E+ ++ + G+ +PN T+N+++ +
Sbjct: 406 TFNTLIDGLCKDKKIDDAFELINQMI------SEGL----------QPNNITYNSILTHY 449
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
++G +K D+ M G E D +Y L+ C+ R + A K+ MR K +
Sbjct: 450 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTP 509
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD-VDSAILVYN 376
AYN ++ + A FREM G ++T++ + G CR G + A
Sbjct: 510 KAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFML 569
Query: 377 DMCRKGFEPEGSTIEVL 393
+M KGF PE S+ +L
Sbjct: 570 EMVDKGFIPEFSSFRML 586
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 153/357 (42%), Gaps = 42/357 (11%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIR---VALRSPE--------------NDP--KL 141
C ++++ T+I L + A D+ R V SP+ DP L
Sbjct: 260 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 319
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
+LFE + + C ++ LI + ++ K+ +D+++ + S G T N
Sbjct: 320 RLFEEMKNS--GCTPDEVTYNTLID---NLCSLGKLGKALDLLKDMESTGCPRSTITYNT 374
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
+I + + + E++ ++ D++ + R N TFN L+ G ++
Sbjct: 375 IIDGLCKKMRIEEAEEVFDQM-------------DLQGISR---NAITFNTLIDGLCKDK 418
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ ++ +M G +P+ +Y+ ++ +C++ +++A + E M E DVV Y
Sbjct: 419 KIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYG 478
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
T+I G C+ G A + R M + G+ + + ++ R ++ A+ ++ +M
Sbjct: 479 TLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 538
Query: 382 GFEPEGSTIEVLIGELC-DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
G P+ T +++ LC + EA D + V K G P S+ L +GL G
Sbjct: 539 GEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK-GFIPEFSSFRMLAEGLLNLG 594
>gi|449445409|ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
gi|449518107|ref|XP_004166085.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
Length = 578
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 200/436 (45%), Gaps = 39/436 (8%)
Query: 55 KSRWNHLLS-LCRSGLTPTQFSQIALGLK---NNPHLALRFFSFTQHKSLCKHSLSSYAT 110
K WNHLL S LT QI L L + P L+ FF + + KHSL S
Sbjct: 14 KGHWNHLLKPKISSSLTSKSIHQILLRLSFYCSGPSLSWAFFKWVELIPDYKHSLQSSWA 73
Query: 111 IIHILSRARLIGPARDVI-RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCL 169
+I IL+ + A+ ++ ++A + + P + LV +Y + L+ +
Sbjct: 74 MIFILTEHKHFKTAQGLLEKIAHKDFISSPLV--LNALVTSYDNPDVNAHILSWLM---I 128
Query: 170 EVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDA 229
N + + + ++ + G + C L+ +++ +
Sbjct: 129 IYVNCKMPQDAIQVLEYMRLHGFKPNLHACTVLLNSLAKDR------------------L 170
Query: 230 TAGIGKDVKRVVRVR--PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
T + K K+++RV PN+H +N L+ + G EK E + EM PD Y+Y+
Sbjct: 171 TDTVWKSYKKMIRVGVVPNIHIYNVLIHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNT 230
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L++++ + EA + + M V D+V YN++I GFC+ G+M A + FRE +
Sbjct: 231 LISLYSRKSLHYEALCVQDRMERAGVSPDIVTYNSLIYGFCKEGKMREAVKLFRE--IKD 288
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA- 406
V + VT+ L++GYCR D + A+ + M KG +T ++ +LC++ R+ +A
Sbjct: 289 VSPNHVTYTTLIDGYCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDAN 348
Query: 407 --LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
L+ + R V+ P + LI C+ G M+ ALKV+++M+ G + Y A
Sbjct: 349 KLLNEMGERKVE----PDNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKAL 404
Query: 465 IDGYMKEGNVEMATML 480
I G+ ++E A L
Sbjct: 405 IHGFCWVRDMESAKEL 420
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 177/412 (42%), Gaps = 61/412 (14%)
Query: 112 IHILSRARLIG--PARDVIRVALRSPENDPKLKLFEVLVKTYRE---CGSAP--FVFDLL 164
I +L RL G P V L S D +L + + K+Y++ G P ++++L
Sbjct: 140 IQVLEYMRLHGFKPNLHACTVLLNSLAKD---RLTDTVWKSYKKMIRVGVVPNIHIYNVL 196
Query: 165 IKCCLEVKNIEKIETCV---------------DIVRMLMSR-----------------GL 192
I C + ++EK E V + + L SR G+
Sbjct: 197 IHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRMERAGV 256
Query: 193 SVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNA 252
S + T N+LI+ + + +++RE+ KDV PN T+
Sbjct: 257 SPDIVTYNSLIYGFCKEGKMREAVKLFREI------------KDVS------PNHVTYTT 298
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L+ G+ R FE+ + M G +Y+ ++ CEE R+R+A KL EM ++
Sbjct: 299 LIDGYCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERK 358
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
VE D V NT+I +C+IG+M A + +M +G++ S T++ L++G+C D++SA
Sbjct: 359 VEPDNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDMESAK 418
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+ M G P T L+ C+ + +L + K G LI+
Sbjct: 419 ELLFCMLDVGLSPGYCTYSWLVDGYCELGNEGAIISLLDEFLTK-GYCVDLSVCRALIRR 477
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LC + ++ A K+ + M +G IY++ Y K+G + + + EM
Sbjct: 478 LCHQERVGFAEKIYSTMHLRGVSGDSVIYTSLAYAYWKDGKSNLVSEMLSEM 529
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 113/248 (45%), Gaps = 3/248 (1%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N H + LM+ + + V M G +P+ ++ +VL+ ++R K +
Sbjct: 119 NAHILSWLMIIYVNCKMPQDAIQVLEYMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKSY 178
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++M V ++ YN +I C+ G++ +AE+ EM L V T+ L++ Y R
Sbjct: 179 KKMIRVGVVPNIHIYNVLIHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRK 238
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
A+ V + M R G P+ T LI C + ++ EA+ + R +K + P +
Sbjct: 239 SLHYEALCVQDRMERAGVSPDIVTYNSLIYGFCKEGKMREAVKLF--REIK-DVSPNHVT 295
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI G C EEAL++ M KG + Y++ + +EG + A L EM
Sbjct: 296 YTTLIDGYCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMG 355
Query: 486 ENQVRQED 493
E +V ++
Sbjct: 356 ERKVEPDN 363
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 142/251 (56%), Gaps = 12/251 (4%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ +N L+ G+ ++G ++ ++ EM +G EP Y+Y+ L+ FC+E +M+EA
Sbjct: 39 ISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAM 98
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA-EEFFREMGLSGVESSSVTFEHLVNG 361
+L++ M +K E DVV Y+TII G C+ G++ A E F +M G +++V + L+NG
Sbjct: 99 ELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALING 158
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA---LDILKARVVKFG 418
C+ +++ A + +M KG+ P+ T ++ LC +V EA D + +R G
Sbjct: 159 LCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSR----G 214
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
P +Y L+ L +EGK +EA+K+ +++ KG+ P Y++ + G ++ N++ A
Sbjct: 215 YSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA- 273
Query: 479 MLRKEMFENQV 489
+EMF+ V
Sbjct: 274 ---EEMFKKMV 281
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C P+ Y++ V++ FC++ ++R+ KL+E+M D + D + YN +I G+ + G + A
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+ EM G+E S T+ L+N +C+ + A+ ++ M KGFEP+ T +I L
Sbjct: 64 RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C +V EAL++L ++++ G +Y LI GLC++ +E A K+ EM KG+ P
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ + G + G V A M
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSM 210
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 120/242 (49%), Gaps = 2/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +TF ++ F ++G ++ +M G PD Y++L+ + ++ R+ EA +L
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EEM +E + YN+++ FC+ +M A E F+ M G E VT+ +++G C+
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125
Query: 365 AGDVDSAI-LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G V A+ ++++ M +G LI LC + A +L+ K G P
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK-GYVPDN 184
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y ++ GLC GK+ EA + M +G+ P + Y+ +D KEG + A L K+
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244
Query: 484 MF 485
+
Sbjct: 245 VI 246
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 158/335 (47%), Gaps = 23/335 (6%)
Query: 152 RECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
REC + F +++K C + K+ + ++ G+S N LI ++
Sbjct: 2 RECSPNRYTFRVVLKSFCKQ----GKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKG 57
Query: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
V +Y E+ V + P+++T+N+L+ F +E ++ +++
Sbjct: 58 RVDEANRLYEEMVS----------------VGLEPSIYTYNSLLNAFCKETKMKEAMELF 101
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREA-EKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
MA G EPD +YS +++ C+ ++ EA E L+ +M ++ + VAYN +I G C+
Sbjct: 102 KTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCK 161
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
+ RA + EM G ++T+ +++G CR G V A ++ M +G+ P+
Sbjct: 162 DENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVA 221
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
L+ L + + EA+ + K + K G P +Y ++ GL + M+EA ++ +M
Sbjct: 222 YNGLLDALYKEGKTDEAMKLFKDVIAK-GYMPDTVTYNSILLGLARKSNMDEAEEMFKKM 280
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
V G P+ YS + G+ + V+ A + +EM
Sbjct: 281 VASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEM 315
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 160/350 (45%), Gaps = 23/350 (6%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFD---LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSV 194
+ K+K L KT E G P V ++ C K E +E + ++ RG S
Sbjct: 91 ETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEM---LFHKMIERGCSA 147
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALM 254
NALI + + + + Y++ E+ A+ G P+ T+N ++
Sbjct: 148 NTVAYNALINGLCKDENIERAYKLLEEM------ASKG----------YVPDNITYNTIL 191
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
G R G + + + M G PD +Y+ L+ +E + EA KL++++ K
Sbjct: 192 SGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYM 251
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
D V YN+I+ G M AEE F++M SG + T+ +++G+CRA VD A V
Sbjct: 252 PDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKV 311
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
+M + G P+ T +L+ LC V +A ++ + +V G P SY ++ GLC
Sbjct: 312 LEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELF-STMVDNGCAPDIVSYSVVLNGLC 370
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ K+ +A + M+ + P + ++ +DG K G ++ A L +M
Sbjct: 371 KTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQM 420
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 112/210 (53%), Gaps = 1/210 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N++++G R+ ++ E+++ +M GC P+ +YS++++ C +++ +A K+
Sbjct: 252 PDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKV 311
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EEM DVV YN ++ G C+ + +A E F M +G V++ ++NG C+
Sbjct: 312 LEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCK 371
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
V A ++++ M + P+ T +L+ LC ++ EA D+L G P
Sbjct: 372 TNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCS-GCAPDYV 430
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+Y L+ GL ++G+ +A ++ M KGF
Sbjct: 431 AYNTLMNGLRKQGRHIQADRLTQAMKEKGF 460
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 179/413 (43%), Gaps = 66/413 (15%)
Query: 119 RLIGPARDVIRVALRSPENDPKL----KLFEVLVKTYRECGSAP--FVFDLLIKCCLEVK 172
R P R RV L+S KL KLFE ++ G +P +++LI +
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDN----GISPDGIEYNILIDGYAKKG 57
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
+++ + ++S GL + T N+L+ + + E+++ + A G
Sbjct: 58 RVDEANR---LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTM------AEKG 108
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAF-EKVEDVWVEMARLGCEPDCYSYSVLMAV 291
P+V T++ ++ G + G E +E ++ +M GC + +Y+ L+
Sbjct: 109 F----------EPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALING 158
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C++ + A KL EEM K D + YNTI+ G C +G+++ A++FF M G
Sbjct: 159 LCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPD 218
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE------------------------- 386
V + L++ + G D A+ ++ D+ KG+ P+
Sbjct: 219 VVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFK 278
Query: 387 ----------GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
G+T +++ C ++V +A +L+ + K G P +Y L+ GLC+
Sbjct: 279 KMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLE-EMSKIGAVPDVVTYNILLDGLCKT 337
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+++A ++ + MV G P + YS ++G K V A +L M E ++
Sbjct: 338 NLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKL 390
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V TFN LM G + G ++ +D+ +M GC PD +Y+ LM ++ R +A
Sbjct: 389 KLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQA 448
Query: 302 EKLWEEMRDKNVEHD 316
++L + M++K D
Sbjct: 449 DRLTQAMKEKGFLSD 463
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 195/419 (46%), Gaps = 30/419 (7%)
Query: 81 LKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPK 140
L+ NP +L FF F + + ++ SY ++HILSR R+ D R L + K
Sbjct: 78 LRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMY----DETRAYLNQLVDLCK 133
Query: 141 LK-----LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
K +++ LV YRE +P VFD+++K +E K + K + + + G
Sbjct: 134 FKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVE-KGLTK--NALYVFDNMGKCGRIPS 190
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
+ +CN+L+ + + + + +Y+++ V + P+V + ++
Sbjct: 191 LRSCNSLLNNLVKNGETHTAHYVYQQMIR----------------VGIVPDVFMVSIMVN 234
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
F ++G ++ +M LG EP+ +Y L+ + + A+ + + M +K V
Sbjct: 235 AFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR 294
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMG-LSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
+VV Y +I G+C+ +M AE+ R M + + + L++GYCR G +D A+ +
Sbjct: 295 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 354
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
++M R G + LI C + + EA ++ R+V + L P SY L+ G C
Sbjct: 355 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI-TRMVDWNLKPDSYSYNTLLDGYC 413
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
EG EA + +M+ +G EP++ Y+ + G + G + A + M + V ++
Sbjct: 414 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDE 472
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 154/333 (46%), Gaps = 24/333 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALI------WEVSRGKGVIS------------GYE 217
KI+ V ++ ++ GL + CN+LI E+ +GVI+ Y
Sbjct: 347 KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYN 406
Query: 218 IYREVF---GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
+ + G S+A K ++ + P V T+N L+ G R GAF+ +W M
Sbjct: 407 TLLDGYCREGHTSEAFNLCDKMLQE--GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 464
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
+ G PD YS L+ + A LW+++ + + +NT+I G C++G+M
Sbjct: 465 KXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMV 524
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
AEE F +M G +T+ L++GYC+A +V A V M R+ P LI
Sbjct: 525 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLI 584
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
L RR+ E D+L ++ GL P +Y LI G C+EG +++A EM G
Sbjct: 585 SGLFKSRRLVEXTDLLTEMGIR-GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++ I S + G + G ++ A +L ++M ++
Sbjct: 644 SANIIICSTMVSGLYRLGRIDEANLLMQKMVDH 676
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 129/277 (46%), Gaps = 33/277 (11%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+ AL+ G+ +EG +K + EM G + S +++ R+ EA L
Sbjct: 610 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 669
Query: 305 WEEMRDKN--------VEHDV------------------------VAYNTIIGGFCEIGE 332
++M D ++ D+ + YN I G C+ G+
Sbjct: 670 MQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGK 729
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A FF + L G + T+ L++GY AG+VD A + ++M R+G P T
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 789
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI LC V A + ++ + GLFP +Y LI G C+ G M+ A K++ +M+ +
Sbjct: 790 LINGLCKSENVDRAQRLFH-KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEE 848
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G PS+ YSA I+G K G++E + L +M + V
Sbjct: 849 GISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 39/272 (14%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE-------------- 294
TFN ++ G + G + E+++ +M LGC PD +Y L+ +C+
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Query: 295 ---------------------ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
RR+ E L EM + + ++V Y +I G+C+ G +
Sbjct: 569 EREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 628
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+A + EM +G+ ++ + +V+G R G +D A L+ M GF P+
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 688
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+++ ++LD K L P Y I GLC+ GK+++A + + + KG
Sbjct: 689 DIRYAAIQKIADSLD----ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 744
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
F P Y I GY GNV+ A LR EM
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 776
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 1/215 (0%)
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
R A +K+ D E + P+ Y++ +A C+ ++ +A + + + K D
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 750
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
Y T+I G+ G + A EM G+ + VT+ L+NG C++ +VD A +++ +
Sbjct: 751 TYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 810
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+KG P T LI C K +A LK ++++ G+ P+ +Y LI GLC+ G
Sbjct: 811 HQKGLFPNVVTYNTLIDGYC-KIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGD 869
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+E ++K+ +M+ G + L Y + G K N
Sbjct: 870 IERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSN 904
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 79/142 (55%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+ L+ G+ G ++ + EM R G P+ +Y+ L+ C+ + A++L
Sbjct: 747 PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRL 806
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ ++ K + +VV YNT+I G+C+IG M A + +M G+ S VT+ L+NG C+
Sbjct: 807 FHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCK 866
Query: 365 AGDVDSAILVYNDMCRKGFEPE 386
GD++ ++ + N M + G + +
Sbjct: 867 HGDIERSMKLLNQMIKAGVDSK 888
>gi|356517946|ref|XP_003527646.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 511
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 188/425 (44%), Gaps = 39/425 (9%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI 128
LTP+ ++ L PH +F F++HK HS +Y+ ++ L R+ L A+ V+
Sbjct: 36 LTPSLVYEVVDKLSIIPHFGFKFVEFSRHKLHMSHSYLTYSLLLRSLCRSNLHHTAK-VV 94
Query: 129 RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLM 188
+R P +L LV +Y G +++ +++ +
Sbjct: 95 YDWMRCDGQIPDNRLLGFLVSSYAIVG--------------------RLDVSRELLADVQ 134
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVH 248
+ V N L + R V+ ++RE+ L R +P +
Sbjct: 135 CNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRL----------------RYKPVTY 178
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T N L+ G R G ++ + ++ GC PD +Y+ L+ C + A L E+
Sbjct: 179 TVNILIRGLCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRARSLLREV 238
Query: 309 -RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
+ DVV+Y II G+C++ +M F EM SG ++ TF L++G+ + GD
Sbjct: 239 CLNGEFAPDVVSYTMIISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGD 298
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+ SA+ +Y+ M +G P+ +T LI R+V +A+D+ ++ + + + +Y
Sbjct: 299 MASALALYSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMDMWH-KMNEKNIGASLYTYS 357
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
L+ GLC ++ +A + + P IY+ IDGY K GNV+ A + EM N
Sbjct: 358 VLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVN 417
Query: 488 QVRQE 492
+ + +
Sbjct: 418 RCKPD 422
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 1/202 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TFNAL+ GF + G ++ +M GC PD +++ L+ R++ +A +
Sbjct: 281 PNTFTFNALIDGFGKLGDMASALALYSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMDM 340
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W +M +KN+ + Y+ ++ G C + +A + R + S + + +++GYC+
Sbjct: 341 WHKMNEKNIGASLYTYSVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCK 400
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G+VD A + +M +P+ T +LI C K R+ EA+ +++ G P E
Sbjct: 401 SGNVDEANKIVAEMEVNRCKPDKLTFTILIIGHCMKGRMPEAIGFFD-KMLAVGCAPDEI 459
Query: 425 SYMFLIKGLCEEGKMEEALKVQ 446
+ L L + G EA +V+
Sbjct: 460 TVNNLRSCLLKAGMPGEAARVK 481
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 195/419 (46%), Gaps = 30/419 (7%)
Query: 81 LKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPK 140
L+ NP +L FF F + + ++ SY ++HILSR R+ D R L + K
Sbjct: 78 LRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMY----DETRAYLNQLVDLCK 133
Query: 141 LK-----LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
K +++ LV YRE +P VFD+++K +E K + K + + + G
Sbjct: 134 FKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVE-KGLTK--NALYVFDNMGKCGRIPS 190
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
+ +CN+L+ + + + + +Y+++ V + P+V + ++
Sbjct: 191 LRSCNSLLNNLVKNGETHTAHYVYQQMIR----------------VGIVPDVFMVSIMVN 234
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
F ++G ++ +M LG EP+ +Y L+ + + A+ + + M +K V
Sbjct: 235 AFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR 294
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMG-LSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
+VV Y +I G+C+ +M AE+ R M + + + L++GYCR G +D A+ +
Sbjct: 295 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 354
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
++M R G + LI C + + EA ++ R+V + L P SY L+ G C
Sbjct: 355 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI-TRMVDWNLKPDSYSYNTLLDGYC 413
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
EG EA + +M+ +G EP++ Y+ + G + G + A + M + V ++
Sbjct: 414 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDE 472
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 154/333 (46%), Gaps = 24/333 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALI------WEVSRGKGVIS------------GYE 217
KI+ V ++ ++ GL + CN+LI E+ +GVI+ Y
Sbjct: 347 KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYN 406
Query: 218 IYREVF---GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
+ + G S+A K ++ + P V T+N L+ G R GAF+ +W M
Sbjct: 407 TLLDGYCREGHTSEAFNLCDKMLQE--GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 464
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
+ G PD YS L+ + A LW+++ + + +NT+I G C++G+M
Sbjct: 465 KRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMV 524
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
AEE F +M G +T+ L++GYC+A +V A V M R+ P LI
Sbjct: 525 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLI 584
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
L RR+ E D+L ++ GL P +Y LI G C+EG +++A EM G
Sbjct: 585 SGLFKSRRLVEVTDLLTEMGIR-GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++ I S + G + G ++ A +L ++M ++
Sbjct: 644 SANIIICSTMVSGLYRLGRIDEANLLMQKMVDH 676
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 129/277 (46%), Gaps = 33/277 (11%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+ AL+ G+ +EG +K + EM G + S +++ R+ EA L
Sbjct: 610 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 669
Query: 305 WEEMRDKN--------VEHDV------------------------VAYNTIIGGFCEIGE 332
++M D ++ D+ + YN I G C+ G+
Sbjct: 670 MQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGK 729
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A FF + L G + T+ L++GY AG+VD A + ++M R+G P T
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 789
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI LC V A + ++ + GLFP +Y LI G C+ G M+ A K++ +M+ +
Sbjct: 790 LINGLCKSENVDRAQRLFH-KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEE 848
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G PS+ YSA I+G K G++E + L +M + V
Sbjct: 849 GISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 39/272 (14%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE-------------- 294
TFN ++ G + G + E+++ +M LGC PD +Y L+ +C+
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Query: 295 ---------------------ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
RR+ E L EM + + ++V Y +I G+C+ G +
Sbjct: 569 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 628
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+A + EM +G+ ++ + +V+G R G +D A L+ M GF P+
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 688
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+++ ++LD K L P Y I GLC+ GK+++A + + + KG
Sbjct: 689 DIRYAAIQKIADSLD----ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 744
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
F P Y I GY GNV+ A LR EM
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 776
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 109/217 (50%), Gaps = 1/217 (0%)
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
R A +K+ D E + P+ Y++ +A C+ ++ +A + + + K D
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 750
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
Y T+I G+ G + A EM G+ + VT+ L+NG C++ +VD A +++ +
Sbjct: 751 TYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 810
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+KG P T LI C K +A LK ++++ G+ P+ +Y LI GLC+ G
Sbjct: 811 HQKGLFPNVVTYNTLIDGYC-KIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGD 869
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+E ++K+ +M+ G + L Y + GY++ G ++
Sbjct: 870 IERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQ 906
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 1/205 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +N + G + G + + ++ G PD ++Y L+ + + EA +L
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 771
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EM + + ++V YN +I G C+ + RA+ F ++ G+ + VT+ L++GYC+
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 831
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G++D+A + + M +G P T LI LC + ++ +L +++K G+
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLN-QMIKAGVDSKLI 890
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEM 449
Y L++G G+M++ K+ M
Sbjct: 891 EYCTLVQGYIRSGEMQKIHKLYDMM 915
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 78/172 (45%), Gaps = 16/172 (9%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++ RGL + T NALI + + + V ++ ++ G+ PN
Sbjct: 775 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLH------QKGL----------FPN 818
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T+N L+ G+ + G + + +M G P +YS L+ C+ + + KL
Sbjct: 819 VVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLN 878
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+M V+ ++ Y T++ G+ GEM + + + M + + +++++ + +
Sbjct: 879 QMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISHKQV 930
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 216/482 (44%), Gaps = 37/482 (7%)
Query: 43 ATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCK 102
+ +V+ +T ++ W LL L + L+P + N+P L FF++ Q +
Sbjct: 39 SNIVNEITTFLNQKNWESLLPLVSNKLSPDVVHSVITKQVNDPKRLLDFFNWVQFQMGFS 98
Query: 103 HSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRE--------- 153
L S++ + IL +RL A V+ + ++ + L+K+ +E
Sbjct: 99 QKLQSFSILALILCNSRLFSRADSVVNQMIMMSSGGYS-EILDSLIKSCKEFDLNNVNGN 157
Query: 154 ----CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG 209
VF+LLI K + V G V + CN L+ ++ +
Sbjct: 158 ENSNNNDRGVVFELLID---GYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKA 214
Query: 210 K----------GVISG---YEIYREVFGLDSDATAGIGKDVKRVV------RVRPNVHTF 250
G++ +++Y +++ AG K+ KR++ P++ T+
Sbjct: 215 NKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTY 274
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
N ++ G R G ++ ++ M + G D ++YS+L+ F +++R EA+ + EEM
Sbjct: 275 NVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFS 334
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
K ++ VAY +I GF G+ A EM GV+ + T+ LV G C+ GD++
Sbjct: 335 KGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEK 394
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A + N+M G +P+ T +I ++ D+L + + K L PT + +I
Sbjct: 395 ADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLL-SEMKKSNLVPTAYTCGMII 453
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
GLC G +E+A +V MV G +P+ IY+ I G+++EG + A + K M + V+
Sbjct: 454 NGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQ 513
Query: 491 QE 492
+
Sbjct: 514 PD 515
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 212/484 (43%), Gaps = 54/484 (11%)
Query: 34 PSDQSHNLIATVVSLLTHHRSKSRWNHLLS-LCRSGLTPTQFSQIALGLKNNPHLALRFF 92
P Q++N ++ ++ SR LLS + +S L PT ++ G+ N
Sbjct: 409 PDTQTYN---NMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYT---CGMIIN-------- 454
Query: 93 SFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYR 152
LC+H A+ + + + + P + ++ + + + ++K
Sbjct: 455 ------GLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMD 508
Query: 153 ECGSAPFVF---DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG 209
+ G P V ++I C K+E D + ++ RGL V T ALI +
Sbjct: 509 KKGVQPDVLCYNSVIIGLC----KSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKS 564
Query: 210 KGVISGYEIYREVFG-------------LDSDATAGIGKDVKRVVR------VRPNVHTF 250
+ ++E+ G +D G + + R V P+V T+
Sbjct: 565 GEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTY 624
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
+AL+ G R G + ++ E G PD ++Y+ +++ FC++ + +A +L E M
Sbjct: 625 SALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQ 684
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
K + +++ YN +I G C+ GE+ RA E F + G+ ++VT+ +++GYC++G++
Sbjct: 685 KGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSK 744
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A ++++M KG P+ LI + +AL + V K F + S L+
Sbjct: 745 AFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKG--FASTSSLNALM 802
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID-----GYMKEGNVEMATMLRKEMF 485
G C+ GK+ EA ++ +MV K +P Y+ ID G++KE M ++ +
Sbjct: 803 DGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLM 862
Query: 486 ENQV 489
N +
Sbjct: 863 PNAL 866
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 187/418 (44%), Gaps = 20/418 (4%)
Query: 83 NNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN--DPK 140
N L RF++ ++ H + +Y +I+ RA G A++ R+ E P
Sbjct: 215 NKLELFWRFYNGMLEANVL-HDVYTYTHLINAHFRA---GNAKEGKRLLFEMEEKGCSPS 270
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIV--RMLMSRGLSVKVST 198
L + V++ G F+L K ++K D+ +L+ K T
Sbjct: 271 LVTYNVVIGGLCRAGEVDEAFEL-------KKLMDKKGLVADVFTYSILIDGFGKQKRCT 323
Query: 199 CNALIWEVSRGKGVISGYEIYREVF-GLDSDATAGIGKDVKRVVRVRP---NVHTFNALM 254
L+ E KG+ G+ Y + G +G VK + R N+ T+NAL+
Sbjct: 324 EAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALV 383
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
G + G EK + + EM +G +PD +Y+ ++ + +E+ + L EM+ N+
Sbjct: 384 KGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLV 443
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
II G C G + A F M GV+ ++V + L+ G+ + G A+ +
Sbjct: 444 PTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRI 503
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
M +KG +P+ +I LC R++ EA D L +++ GL P +Y LI G C
Sbjct: 504 LKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYL-VEMIERGLKPNVYTYGALIHGYC 562
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ G+M+ A + EM+G G P+ + +A IDGY KEG+ AT + + M V +
Sbjct: 563 KSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPD 620
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 177/407 (43%), Gaps = 30/407 (7%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP-- 158
CK ++ AT I R + P + + KL+ L+ + E G P
Sbjct: 597 CKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDV 656
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI------WEVSR---- 208
F ++ +I + I K + + +G+S + T NALI E+ R
Sbjct: 657 FTYNSIISGFCKQGGIGK---AFQLHEYMCQKGISPNIITYNALINGLCKAGEIERAREL 713
Query: 209 -----GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGF 257
GKG+ Y + +D +G R+ V P+ ++AL+ G
Sbjct: 714 FDGIPGKGLAHNAVTYATI--IDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGC 771
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+EG EK +++E + G S + LM FC+ ++ EA +L E+M DK+V+ D
Sbjct: 772 RKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDH 830
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
V Y +I C+ G + AE+FF +M + +++T+ L++GY AG ++++
Sbjct: 831 VTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDE 890
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
M K EP+G T V+I + + L ++ + K G ++ LI LC +
Sbjct: 891 MIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHV-LIDPLCRKE 949
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ E LKV ++ +G SL S + + K G ++ A + K M
Sbjct: 950 HVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSM 996
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 1/202 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+ NALM GF + G + + +M +PD +Y++L+ C+ ++EAE+ + +M
Sbjct: 797 SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDM 856
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ +N+ + + Y ++ G+ G + F EM +E VT+ +++ + + GD
Sbjct: 857 QKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDH 916
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ + +DM +KG + VLI LC K V E L +L+ ++ + GL + +
Sbjct: 917 VKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLE-KIEEQGLNLSLATCST 975
Query: 429 LIKGLCEEGKMEEALKVQAEMV 450
L++ + GKM+ A +V MV
Sbjct: 976 LVRCFHKAGKMDGAARVLKSMV 997
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 148/373 (39%), Gaps = 50/373 (13%)
Query: 64 LCRSGLTPTQFSQIAL--GLKNNPHL--ALRFFSFTQHKSLCKHSLSSYATIIHILSRAR 119
+C+ G++P + AL GL + A F K L H+ +YATII ++
Sbjct: 682 MCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLA-HNAVTYATIIDGYCKSG 740
Query: 120 LIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIET 179
+ A +LF+ + T + FV+ LI C + N EK
Sbjct: 741 NLSKA----------------FRLFDEM--TLKGVPPDSFVYSALIDGCRKEGNTEK--- 779
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG-------------LD 226
+ + + +G + S+ NAL+ + VI ++ ++ +D
Sbjct: 780 ALSLFLESVQKGFA-STSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILID 838
Query: 227 SDATAGIGKDVKRVV------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
G K+ ++ + PN T+ AL+ G+ G ++ ++ EM EP
Sbjct: 839 YHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEP 898
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDK--NVEHDVVAYNTIIGGFCEIGEMARAEE 338
D ++SV++ +E + KL ++M K NV +V + +I C ++ +
Sbjct: 899 DGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVC--HVLIDPLCRKEHVSEVLK 956
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
++ G+ S T LV + +AG +D A V M R + P+ + + LI
Sbjct: 957 VLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQ 1016
Query: 399 DKRRVFEALDILK 411
D A D LK
Sbjct: 1017 DSTDSENAGDFLK 1029
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 131/248 (52%), Gaps = 1/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ TF L+ G EG ++ +++ EMA P+ ++++L+ V C++ + EA
Sbjct: 152 IQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEAR 211
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++E M +K VE ++ YN ++ G+C EM A + F M G S ++ L+NGY
Sbjct: 212 CVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGY 271
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++ +D A + M K P T L+ LC + EA ++ K ++ G+ P
Sbjct: 272 CKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFK-KMCSSGMLPN 330
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++Y L+ GLC+ G +EEALK+ M + EP + +Y+ I G G +E+A L
Sbjct: 331 LRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFS 390
Query: 483 EMFENQVR 490
++F N +R
Sbjct: 391 KLFANGIR 398
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 129/242 (53%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN++T+NALM G+ V+ M GC P +SYS+L+ +C+ RR+ EA+
Sbjct: 222 VEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAK 281
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +M +K + + V YNT++ G C + A+E F++M SG+ + T+ L++G
Sbjct: 282 ALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGL 341
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G ++ A+ + M + EP+ +LI + ++ E L +++ G+ P+
Sbjct: 342 CKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKL-EVAKELFSKLFANGIRPS 400
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++Y +IKGL +EG +EA K+ +M GF P Y+ I G+++ + A L
Sbjct: 401 VRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLID 460
Query: 483 EM 484
EM
Sbjct: 461 EM 462
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 134/345 (38%), Gaps = 40/345 (11%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
D L S + STC G +S G+D DA A + + +
Sbjct: 27 DFPSFLFSNHHHLNTSTCTKKPSLPQNNGGFVSNNS---NDIGID-DAMASFYRMIH--M 80
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
RP+ + ++ + V + +M G + Y+ ++L+ C + A
Sbjct: 81 NPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFA 140
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ +M ++ D V + T+I G C G + A E F EM ++VTF LV+
Sbjct: 141 VSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDV 200
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC------DKRRVFEAL-------- 407
C+ G V A V+ M KG EP T L+ C D +VFE +
Sbjct: 201 LCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPS 260
Query: 408 -----------------DILKARVVKFG---LFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
D KA + + L P +Y L++GLC + EA ++
Sbjct: 261 VHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFK 320
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+M G P+L YS +DG K G++E A L M E ++ +
Sbjct: 321 KMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPD 365
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 119/263 (45%), Gaps = 22/263 (8%)
Query: 132 LRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRG 191
LR ND K+FE++V + C + + +LI + + I++ + ++ + +
Sbjct: 238 LRLEMNDAS-KVFEIMVG--KGCAPSVHSYSILINGYCKSRRIDEAKA---LLTQMSEKE 291
Query: 192 LSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFN 251
L T N L+ + ++ E+++++ ++G+ PN+ T++
Sbjct: 292 LIPNTVTYNTLMQGLCHASSLLEAQELFKKM------CSSGM----------LPNLRTYS 335
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
L+ G + G E+ + M EPD Y++L+ ++ A++L+ ++
Sbjct: 336 ILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFAN 395
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
+ V YN +I G + G A + FR+M G S ++ ++ G+ + D +A
Sbjct: 396 GIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTA 455
Query: 372 ILVYNDMCRKGFEPEGSTIEVLI 394
I + ++M + F + ST ++L+
Sbjct: 456 IQLIDEMVGRRFSADSSTFKMLL 478
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 199/462 (43%), Gaps = 47/462 (10%)
Query: 31 STPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALR 90
S SD S L ++S R S H L +TP + L N LA R
Sbjct: 34 SVDASDLSKRLCKLIISC----RKASALEHELDHSGVRVTPEIAESVLKHLDNAGMLAYR 89
Query: 91 FFSFT--QHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
FF + Q + +C H++ SY T++ L++ R DV VA+ E ++ F +++
Sbjct: 90 FFEWARKQKRGVCAHTVRSYHTVVTSLAKIRQYQLMWDV--VAIMRKEGVANVETFGIIM 147
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+ Y +K++ V ++ G++ ++ N+L+ + +
Sbjct: 148 RKYARA--------------------QKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALCK 187
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVED 268
K V EI+ ++ R P+ T++ L+ G+ R + K+ +
Sbjct: 188 SKNVRKAQEIFDKMNN-----------------RFSPDAKTYSILLEGWGRAPSLPKMRE 230
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
V+ +M GC+PD +Y +++ C+ R+ EA + ++M + + Y+ ++ +
Sbjct: 231 VYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYG 290
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ A F +M G+ V + L+ +C+ ++A V +DM G P
Sbjct: 291 VDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSR 350
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
T +++ L + EA + ++ + + P +Y +IK CE K+E ALKV
Sbjct: 351 TWNIILNTLISLGKDDEAYRVFRSMIKRCK--PDSDTYTMMIKMFCENDKIEMALKVWKY 408
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
M K F PS+ +S I+G +G V A +L ++M E +R
Sbjct: 409 MRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIR 450
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 22/219 (10%)
Query: 152 RECGSAPFVFDLLIKCCLEVKNIE-KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
R C F++ +L+ ++ +IE V + G+ V NALI + K
Sbjct: 273 RGCQPTTFIYSILV----HTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVK 328
Query: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
+ + + D G G + PN T+N ++ G ++ V+
Sbjct: 329 KFENAFRVM--------DDMQGHG--------ISPNSRTWNIILNTLISLGKDDEAYRVF 372
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
M + C+PD +Y++++ +FCE ++ A K+W+ MR K + ++ +I G C+
Sbjct: 373 RSMIK-RCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDK 431
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
GE+++A +M G+ TF L + G D
Sbjct: 432 GEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKD 470
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 138/252 (54%), Gaps = 6/252 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P + T+N+++ G R G ++K +V+ M G PD S+++L+ FC + EA
Sbjct: 225 IKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEAL 284
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ ++EMR + V DVV+++ +IG F GEM A E+ REM G+ V + ++ G+
Sbjct: 285 RFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGF 344
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRAG + A+ V ++M G P+ T L+ LC +RR+ +A ++L + + G+ P
Sbjct: 345 CRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLN-EMKERGVPPD 403
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT---- 478
++ LI G C +G +E+AL+ + + P + Y+ IDG ++G++ A
Sbjct: 404 LCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWD 463
Query: 479 -MLRKEMFENQV 489
M +E+F N V
Sbjct: 464 DMHSREIFPNHV 475
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 171/372 (45%), Gaps = 31/372 (8%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIV 184
V++ LR+ D ++F + CG AP V F++LI +E+ +
Sbjct: 235 VLKGLLRNGRWDKAREVFRAM----DACGVAPDVRSFNMLIGGFCRAGELEE---ALRFY 287
Query: 185 RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATAGIGKDVKRVVR 242
+ + R ++ V + + LI +R + E RE+ FGL D
Sbjct: 288 KEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGV------------ 335
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ ++ GF R G + V EM GC PD +Y+ L+ C+ERR+ +AE
Sbjct: 336 ------IYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAE 389
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM+++ V D+ + T+I G+C G + +A +FF + + VT+ L++G
Sbjct: 390 ELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGM 449
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR GD+ A +++DM + P T +LI C+K +V A L V K G+ P
Sbjct: 450 CRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNK-GIVPN 508
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +IKG C G + + + +M P L Y+ I GY+KEG + A L K
Sbjct: 509 IMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLK 568
Query: 483 EMFENQVRQEDG 494
M EN+ Q D
Sbjct: 569 IM-ENENVQPDA 579
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 124/250 (49%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T N ++ +R G E + M G +P +Y+ ++ R +A
Sbjct: 190 VFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAR 249
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ M V DV ++N +IGGFC GE+ A F++EM V V+F L+ +
Sbjct: 250 EVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLF 309
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
R G++D A +M G P+G ++IG C + EAL + + +V FG P
Sbjct: 310 TRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRV-RDEMVAFGCLPD 368
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ GLC+E ++ +A ++ EM +G P L ++ I GY ++GN+E A
Sbjct: 369 VVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFD 428
Query: 483 EMFENQVRQE 492
+ + ++R +
Sbjct: 429 TISDQRLRPD 438
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 36/252 (14%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+RP++ T+N L+ G R+G K ++W +M P+ +YS+L+ CE+ ++ A
Sbjct: 434 RLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNA 493
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+EM +K + +++ YN+II G+C G +++ ++F +M V +T+ L++G
Sbjct: 494 FAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHG 553
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
Y + G + A F L I++ V+ P
Sbjct: 554 YVKEGKMHEA--------------------------------FNLLKIMENENVQ----P 577
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y +I G G M+EA V +M +G EP Y + I+G++ GN + + L
Sbjct: 578 DAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLH 637
Query: 482 KEMFENQVRQED 493
EM + + +D
Sbjct: 638 DEMLQKGLAPDD 649
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 144/276 (52%), Gaps = 7/276 (2%)
Query: 217 EIYREVFGLDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVW 270
++Y +D G K+ K V+ ++P V T+N+LM G++ K + ++
Sbjct: 176 DVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIF 235
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
MA+LG PD SYS+L+ FC+ + M EA +L +EM K + +VV Y+++I G C+
Sbjct: 236 NTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKS 295
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G+++ A + EM G + VT+ +++ C+ VD+AI + M +G +P T
Sbjct: 296 GKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTY 355
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+LI LC ++ +A + + +VK G +Y +I+G C++G +EAL + ++M
Sbjct: 356 TILIKGLCQSGKLEDARKVFEDLLVK-GHNLNVYTYTVMIQGFCDKGLFDEALTLLSKME 414
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
G P+ + Y I K+ EMA L EM E
Sbjct: 415 DNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIE 450
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 117/252 (46%), Gaps = 12/252 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ FN ++ + + V + +M G +P+ + ++L+ FC+ + A +
Sbjct: 61 PNIE-FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSV 119
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCE----------IGEMARAEEFFREMGLSGVESSSVT 354
++ + + + NT+I G C +G++ A + F +M L + T
Sbjct: 120 LTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYT 179
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
F LV+G+C+ G V A V M +G +P T L+ ++V +A I +
Sbjct: 180 FTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNT-M 238
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ G+ P +SY LI G C+ M+EA+++ EM K P++ YS+ IDG K G +
Sbjct: 239 AQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKI 298
Query: 475 EMATMLRKEMFE 486
A L EM +
Sbjct: 299 SYALKLVDEMHD 310
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 11/205 (5%)
Query: 290 AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
F + +A L+ + +N + +N I+G + ++M G++
Sbjct: 35 TTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIK 94
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC------DKR-- 401
+ V L+N +C+ G + SA V + + G++P T+ LI LC DK
Sbjct: 95 PNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCI 154
Query: 402 --RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
++ +A+D+ +++ + P ++ L+ G C+EG+++EA V A M+ +G +P +
Sbjct: 155 VGKLKDAVDLFNKMILE-NINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVV 213
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEM 484
Y++ +DGY V A + M
Sbjct: 214 TYNSLMDGYFLVKQVNKAKSIFNTM 238
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV+T+ ++ GF +G F++ + +M GC P+ +Y +++ ++ AEKL
Sbjct: 386 NVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLL 445
Query: 306 EEMRDKNVEHDVVAYNTIIG 325
EM + N + V N +I
Sbjct: 446 CEMIETNFDGRVALTNDLIA 465
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 180/397 (45%), Gaps = 22/397 (5%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
S +H+L SY T+IH L +++ A+ +I++ + +F +++T S
Sbjct: 7 STFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDI 66
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+VF LI LE + C R++ V TC ++ + + K +
Sbjct: 67 YVFSGLITAYLESGFLRDAIECY---RLIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
Y E A+ ++ FN LM F +EG + V+ + +
Sbjct: 124 YEESLECGYPAS----------------LYFFNILMHSFVKEGEIRLAQSVFDAITKWSL 167
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P S++ LM + + + E +L M+ V+ DV Y+ +I G C+ +M A E
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANE 227
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F EM +G+ + VTF L++G+C+ VD A+ +Y M + P+ T LI LC
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
K + +A D++ +K GL P + +Y LI G C+EG +E A + + M+ +
Sbjct: 288 KKGDLKQAQDLIDEMSMK-GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 459 EIYSAFIDGYMKEG-NVEMATMLRKEMFENQVRQEDG 494
Y+A I G +EG +V+ MLR EM ++ E G
Sbjct: 347 VAYTALISGLCQEGRSVDAEKMLR-EMLSVGLKPEIG 382
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ LS + T N LI+ + + + ++ +D + G+
Sbjct: 256 RVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL------IDEMSMKGL-- 307
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+ L+ G +EG E + M + D +Y+ L++ C+E
Sbjct: 308 --------KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R +AEK+ EM ++ ++ Y II FCE G++ + +EM G S VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPSVVT 418
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 162/315 (51%), Gaps = 17/315 (5%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
++++ +D++ + G+ V T N+LI G+ S G SDAT +
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLI------SGLCSS--------GRWSDATRMVS 245
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
KR + P+V TFNAL+ +EG + E+ + EM R +PD +YS+L+ C
Sbjct: 246 CMTKR--EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R+ EAE+++ M K DVV Y+ +I G+C+ ++ + F EM GV ++VT
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ GYCRAG ++ A ++ M G P T VL+ LCD ++ +AL IL A +
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL-ADM 422
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
K G+ +Y +I+G+C+ G++ +A + + +G P + Y+ + G K+G
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482
Query: 475 EMATMLRKEMFENQV 489
A L ++M E+ +
Sbjct: 483 READALFRKMKEDGI 497
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 114/224 (50%), Gaps = 5/224 (2%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
D++ M + P +S L++ + ++ LWE+M+ + H++ N ++ F
Sbjct: 67 DLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C +++ A F +M G E S VTF L+NG+CR V A+ +++ M G++P
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+I LC ++V ALD+L R+ K G+ P +Y LI GLC G+ +A ++ +
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLN-RMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVS 245
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
M + P + ++A ID +KEG V A +E +E +R+
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRVSEA----EEFYEEMIRR 285
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 167/390 (42%), Gaps = 41/390 (10%)
Query: 125 RDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIV 184
R+++R +R + D L LF +V +C P + D + + ++K + + +
Sbjct: 50 REMLRNGIRFMKLDDSLDLFFHMV----QCRPLPSIADF-SRLLSAISKMKKYDVVIYLW 104
Query: 185 RMLMSRGLSVKVSTCNALIWEVSR-----------GKGVISGYEIYREVFG--------- 224
+ G+ + TCN L+ R GK + G+E FG
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 225 ---LDS----DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
D+ D G+G +PNV +N ++ G + + D+ M + G
Sbjct: 165 DRVYDALYMFDQMVGMG--------YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
PD +Y+ L++ C R +A ++ M + + DV +N +I + G ++ AE
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
EF+ EM ++ VT+ L+ G C +D A ++ M KG P+ T +LI
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C ++V + + + + G+ +Y LI+G C GK+ A ++ MV G P+
Sbjct: 337 CKSKKVEHGMKLF-CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ Y+ + G G +E A ++ +M +N
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKN 425
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++S+G V T + LI + K V G +++ E+ + VVR N
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM-------------SQRGVVR---N 360
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
T+ L+ G+ R G E+++ M G P+ +Y+VL+ C+ ++ +A +
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+M+ ++ D+V YN II G C+ GE+A A + + + G+ T+ ++ G + G
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Query: 367 DVDSAILVYNDMCRKGFEPE 386
A ++ M G P
Sbjct: 481 LRREADALFRKMKEDGILPN 500
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 146/313 (46%), Gaps = 6/313 (1%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR-EVFGLDSDATA 231
N+ I C ++R G + K A I E+ G G + Y + G
Sbjct: 133 NVPDIIPCTTLIRGFCRLGKTRKA----AKILEILEGSGAVPDVITYNVMISGYCKAGEI 188
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
V + V P+V T+N ++ G ++ +V M + C PD +Y++L+
Sbjct: 189 NNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C + + A KL +EMRD+ DVV YN ++ G C+ G + A +F +M SG + +
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+T ++ C G A + DM RKGF P T +LI LC K + A+DIL+
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
++ + G P SY L+ G C+E KM+ A++ MV +G P + Y+ + K+
Sbjct: 369 -KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 472 GNVEMATMLRKEM 484
G VE A + ++
Sbjct: 428 GKVEDAVEILNQL 440
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 109/211 (51%), Gaps = 1/211 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN ++N L+ GF +E ++ + M GC PD +Y+ ++ C++ ++ +A +
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ ++ K ++ YNT+I G + G+ +A + EM ++ ++T+ LV G
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G VD AI +++ R G P T ++ LC R+ A+D L ++ G P E
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL-VFMINRGCKPNE 554
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
SY LI+GL EG +EAL++ E+ KG
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN L+ R+G + D+ +M + GC+P+ SY+ L+ FC+E++M A +
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M + D+V YNT++ C+ G++ A E ++ G +T+ +++G +
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG AI + ++M K +P+ T L+G L + +V EA+ + G+ P
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH-EFERMGIRPNAV 520
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ ++ GLC+ + + A+ M+ +G +P+ Y+ I+G EG + A L E+
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 1/234 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNV T N ++ G + E + +M R G P ++++L+ C + + A
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAID 365
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ E+M + + ++YN ++ GFC+ +M RA E+ M G VT+ ++ C
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G V+ A+ + N + KG P T +I L + +A+ +L K L P
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK-DLKPDT 484
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y L+ GL EGK++EA+K E G P+ +++ + G K + A
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ E K E M D++ T+I GFC +G+ +A + + SG +T+
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
+++GYC+AG++++A+ V + R P+ T ++ LCD ++ +A+++L R+++
Sbjct: 178 MISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD-RMLQR 233
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+P +Y LI+ C + + A+K+ EM +G P + Y+ ++G KEG ++ A
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 478 TMLRKEM 484
+M
Sbjct: 294 IKFLNDM 300
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 14/245 (5%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V N H + G EG F+ +E+ M G PD + L+ FC + R+A
Sbjct: 103 VESNNHLRQMVRTGELEEG-FKFLEN----MVYHGNVPDIIPCTTLIRGFCRLGKTRKAA 157
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+ E + DV+ YN +I G+C+ GE+ A M +S VT+ ++
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSL 214
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +G + A+ V + M ++ P+ T +LI C V A+ +L + G P
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD-EMRDRGCTPD 273
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI-----DGYMKEGNVEMA 477
+Y L+ G+C+EG+++EA+K +M G +P++ ++ + G + +A
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 478 TMLRK 482
MLRK
Sbjct: 334 DMLRK 338
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 122/290 (42%), Gaps = 39/290 (13%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFD- 162
S+ ++ +I+ L R L+G A D++ + P++ C ++
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILE---KMPQHG---------------CQPNSLSYNP 384
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
LL C E +K++ ++ + ++SRG + T N ++ + + V EI +
Sbjct: 385 LLHGFCKE----KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ- 439
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
L S + P + T+N ++ G + G K + EM +PD
Sbjct: 440 --LSSKGCS-------------PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+YS L+ E ++ EA K + E + + V +N+I+ G C+ + RA +F
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 544
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
M G + + ++ L+ G G A+ + N++C KG + S +V
Sbjct: 545 MINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 154/295 (52%), Gaps = 15/295 (5%)
Query: 200 NALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYR 259
N +IW + R +I+G+ G S+A + + ++R ++ P+V T+NAL+ F +
Sbjct: 249 NVVIWPLERRTCMINGFCSS----GRWSEAQQLLQEMLERK-KISPDVVTYNALINAFVK 303
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
EG F + E+++ EM G P +YS ++ FC++ R+ AE ++ M K D++
Sbjct: 304 EGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIIT 363
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+NT+I G+C + + EM +G+ ++++T+ L++G+C+ GD+++A + +M
Sbjct: 364 FNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMV 423
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK----------FGLFPTEKSYMFL 429
G P T L+ LCD ++ +AL++ KA G+ P ++Y L
Sbjct: 424 SSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNIL 483
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
I GL EGK EA ++ EM +G P Y++ I G K+ ++ AT + M
Sbjct: 484 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSM 538
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 155/350 (44%), Gaps = 63/350 (18%)
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
ML + +S V T NALI + E+Y E+ GI P
Sbjct: 281 MLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEML------PRGI----------IP 324
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+ T+++++ GF ++ + E ++ MA GC PD +++ L+A +C +R+ + KL
Sbjct: 325 STITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLL 384
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM + + + + Y T+I GFC++G++ A++ +EM SGV + VT L++G C
Sbjct: 385 HEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDN 444
Query: 366 G-----------------DVDSA--------------ILV---------------YNDMC 379
G D+D++ IL+ Y +M
Sbjct: 445 GKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 504
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+G P+ T +I LC + R+ EA + + K P ++ LI G C+ G++
Sbjct: 505 HRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSK-SFSPNVVTFTTLINGYCKAGRV 563
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ L++ EM +G + Y I G+ K GN+ A + +EM + V
Sbjct: 564 DDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGV 613
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 126/232 (54%), Gaps = 9/232 (3%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATAGIGKDVKR 239
D+++ ++S G+ V TCN L+ + + E+++ + +D DA+
Sbjct: 417 DLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNG---- 472
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V P+V T+N L+ G EG F + E+++ EM G PD +Y+ ++ C++ R+
Sbjct: 473 ---VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLD 529
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
EA ++++ M K+ +VV + T+I G+C+ G + E F EMG G+ ++++T+ L+
Sbjct: 530 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 589
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+G+ + G+++ A+ ++ +M G P+ TI ++ L K + A+ +L+
Sbjct: 590 HGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLE 641
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 121/249 (48%), Gaps = 12/249 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P V TF+ L+ G E + D++ +M C+P+ +++ LM C E R+ EA L
Sbjct: 146 PTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVAL 201
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-GLSGVESSSVTFEH-----L 358
+ M + ++ + + Y TI+ G C++G+ A R+M +S ++ + V + +
Sbjct: 202 LDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCM 261
Query: 359 VNGYCRAGDVDSAILVYNDMC-RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
+NG+C +G A + +M RK P+ T LI + + FEA ++ + +
Sbjct: 262 INGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR- 320
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G+ P+ +Y +I G C++ +++ A + M KG P + ++ I GY + V+
Sbjct: 321 GIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDG 380
Query: 478 TMLRKEMFE 486
L EM E
Sbjct: 381 IKLLHEMTE 389
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 25/279 (8%)
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW--VEMARL 276
+ E+ GL+ DA G V+ R P+V F LM R G + V + +EM R+
Sbjct: 53 FHEIKGLE-DAIDLFGDMVRS--RPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRV 109
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
C + YS+++LM FC ++ A + ++ VV ++T++ G C ++ A
Sbjct: 110 PC--NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEA 167
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ F +M + + VTF L+NG CR G V A+ + + M G +P T ++
Sbjct: 168 LDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDG 223
Query: 397 LCDKRRVFEALDIL---------KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+C AL++L K VV ++P E+ +I G C G+ EA ++
Sbjct: 224 MCKMGDTVSALNLLRKMEEVSHIKPNVV---IWPLERRTC-MINGFCSSGRWSEAQQLLQ 279
Query: 448 EMVG-KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
EM+ K P + Y+A I+ ++KEG A L EM
Sbjct: 280 EMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEML 318
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 11/239 (4%)
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
GF+ E D++ +M R P + LM V R+ L +M + V
Sbjct: 52 GFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPC 111
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
+ ++ ++ FC ++ A F ++ G + VTF L++G C + A+ ++
Sbjct: 112 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF 171
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
+ MC+ P T L+ LC + RV EA+ +L R+++ GL P + +Y ++ G+C+
Sbjct: 172 HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLD-RMLEDGLQPNQITYGTIVDGMCK 226
Query: 436 EGKMEEALKVQAEMVG-KGFEPSLEIY-----SAFIDGYMKEGNVEMATMLRKEMFENQ 488
G AL + +M +P++ I+ + I+G+ G A L +EM E +
Sbjct: 227 MGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERK 285
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV TF L+ G+ + G + +++ EM R G + +Y L+ F + + A +
Sbjct: 545 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDI 604
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++EM V D + ++ G E+ RA ++ +S
Sbjct: 605 FQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQMS 646
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 231/518 (44%), Gaps = 63/518 (12%)
Query: 27 STSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSG---LTPTQFSQIALGLKN 83
+++ S PP ++H V+S + + N+ + G + P F ++ +
Sbjct: 36 TSNHSAPPFSETH--FQDVISKSIREKPSNFSNYYWLSHQFGPVIVDPDLFVRVLSSFRT 93
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSP-------- 135
+P +ALR F + + + + S + I+ IL++ L+ A V+ + +
Sbjct: 94 SPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVL 153
Query: 136 -----ENDPKLKLFEVLVKTY------RECGSAPFVFDLLIKCCL--EVKNIEKI----- 177
++ +K+ ++L+ Y +C S VFD +IK L +VKN +I
Sbjct: 154 IGGCVSSEVSVKILDLLIWVYSKKSMVEQCLS---VFDKMIKSRLSPDVKNCNRILRILR 210
Query: 178 -----ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE----------- 221
V++ R + G+ + T N L+ +G V G ++ E
Sbjct: 211 DKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDV 270
Query: 222 -----VFGLDS-----DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
+ GL A IG+ +K ++V + +T+N L+ G++ +G + +
Sbjct: 271 TYNVLINGLSKKGEFEQAKGLIGEMLKTGLKV--SAYTYNPLIYGYFNKGMLAEALSLQE 328
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM G P +Y+ + C+ RM +A + +M N+ DVV+YNT+I G+C +G
Sbjct: 329 EMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLG 388
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ +A F E+ + + VT+ L++G CR G+++ A + +M +G P+ T
Sbjct: 389 NLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYT 448
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+L+ C + A + ++ GL +Y I G + G A +Q EM+
Sbjct: 449 ILVNGSCKMGSLSMAQEFFD-EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLA 507
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
KGF P L IY+ +DG K GN+E A+ L ++M + V
Sbjct: 508 KGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGV 545
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 146/300 (48%), Gaps = 17/300 (5%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
+G S V+T N+ I+ + + G SDA + + + P+V +
Sbjct: 333 KGASPTVATYNSFIYGLCK--------------LGRMSDAMQQLSDMLAN--NLLPDVVS 376
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N L+ G+ R G K ++ E+ + P +Y+ L+ C + + A++L EM
Sbjct: 377 YNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMI 436
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
++ + D+V Y ++ G C++G ++ A+EFF EM G+E S + + G + GD
Sbjct: 437 NEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTS 496
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + +M KGF P+ V++ LC + EA ++L+ ++V G+ P +Y +
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQ-KMVSDGVIPDYVTYTSI 555
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I E G++ + ++ EM+ KG PS+ Y+ I G+ +G +E A + EM E +
Sbjct: 556 IHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGI 615
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 148/341 (43%), Gaps = 52/341 (15%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+++ L V + N LI+ R ++ + ++ E+ R + + P
Sbjct: 365 MLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL----------------RSIYLFPT 408
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ T+N L+ G R+G E + + VEM G PD +Y++L+ C+ + A++ ++
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFD 468
Query: 307 EMRDKNVE-----------------------------------HDVVAYNTIIGGFCEIG 331
EM + +E D++ YN ++ G C++G
Sbjct: 469 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 528
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A E ++M GV VT+ +++ + G + ++ +M KG P T
Sbjct: 529 NLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYT 588
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
VLI K R+ A I + + + G+ P +Y LI GLC+ +M++A AEMV
Sbjct: 589 VLIHGHAGKGRLERAF-IYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVE 647
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
KG P+ Y+ I+ GN + A L K+M + V+ +
Sbjct: 648 KGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPD 688
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 1/218 (0%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
+ + +VG + G + + EM G PD Y+V++ C+ + EA +L ++
Sbjct: 480 YAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 539
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M V D V Y +II E G + + E F EM G+ S VT+ L++G+ G
Sbjct: 540 MVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGR 599
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
++ A + +++M KG P T LI LC RR+ +A + A +V+ G+FP + SY
Sbjct: 600 LERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFF-AEMVEKGIFPNKYSYT 658
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
LI C G +EAL + +M+ +G +P +SA +
Sbjct: 659 ILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 104/203 (51%), Gaps = 1/203 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ +N ++ G + G E+ ++ +M G PD +Y+ ++ E R+R+ ++
Sbjct: 512 PDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREI 571
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM K + VV Y +I G G + RA +F EM G+ + +T+ L+NG C+
Sbjct: 572 FYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCK 631
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+D A + +M KG P + +LI E C+ EAL + K +++ G+ P
Sbjct: 632 VRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYK-QMLDRGVQPDSC 690
Query: 425 SYMFLIKGLCEEGKMEEALKVQA 447
++ L+K L ++ K++ ++++
Sbjct: 691 THSALLKQLGKDCKLQAVRQLES 713
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ T+ +++ G K +++ EM G P +Y+VL+ + R+ A
Sbjct: 545 VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAF 604
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EM++K + +V+ YN++I G C++ M +A FF EM G+ + ++ L+N
Sbjct: 605 IYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINEN 664
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
C G+ A+ +Y M +G +P+ T L+ +L
Sbjct: 665 CNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 102/221 (46%), Gaps = 23/221 (10%)
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
W E ++ G + + ++ + + MR A + E + + N+ H +V + +IGG C
Sbjct: 104 WAE-SQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANM-HRIV--DVLIGG-CV 158
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
E+ S + L+ Y + V+ + V++ M + P+
Sbjct: 159 SSEV-----------------SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKN 201
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
++ L DK + +A+++ + + +FG+ PT +Y L+ C+ GK+++ L + +EM
Sbjct: 202 CNRILRILRDKDLMSKAVEVYRT-MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEM 260
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+G P+ Y+ I+G K+G E A L EM + ++
Sbjct: 261 QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLK 301
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 172/400 (43%), Gaps = 64/400 (16%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
P E + TY+ S P FDLL+ C ++R + G+S
Sbjct: 188 PHRHFVEHYISTYKAFSSDPASFDLLLLCL----------PSAPLLRRVRQYGISPSPEA 237
Query: 199 CNALIWEVSRGKGV----------ISGYEIYREVFGLDSDATAGIGKDVKRV---VRVRP 245
CNA++ + + + + Y I +V AG +D +++ + P
Sbjct: 238 CNAVLSRLPLDEAIELFQGLPDKNVCSYNILLKVL-----CGAGRVEDARQLFDEMASPP 292
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V T+ L+ G+ G E + +M G EP+ Y+ ++A+ C++ R+ +A +
Sbjct: 293 DVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVV 352
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E+M V D Y T++ GFC G++ A +F EM G+ + VT+ L+NG CRA
Sbjct: 353 EDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRA 412
Query: 366 G-----------------DVD------------------SAILVYNDMCRKGFEPEGSTI 390
G DVD A V+N M ++G P T
Sbjct: 413 GELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTY 472
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
L LC + V A ++L K GL +Y LI GLC+ G +++A++ A+M
Sbjct: 473 TALSDGLCKQGDVQAANELLHEMSNK-GLELNACTYNSLINGLCKAGYLDQAMRTMADMD 531
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
G +P + Y+ ID K G ++ A L +EM +N ++
Sbjct: 532 AAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIK 571
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 174/404 (43%), Gaps = 43/404 (10%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
A R+F Q K L ++ Y T+I+ L RA + A V++ L + D + VL
Sbjct: 383 ARRWFDEMQRKGLATDGVT-YTTLINGLCRAGELKEAEKVLQEML-ARRLDVDEVTYTVL 440
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
V Y + G K+ + ++ RG++ V T AL +
Sbjct: 441 VDGYCKRG--------------------KMAEAFQVHNTMVQRGVAPNVVTYTALSDGLC 480
Query: 208 RGKGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEK 265
+ V + E+ E+ GL+ +A T+N+L+ G + G ++
Sbjct: 481 KQGDVQAANELLHEMSNKGLELNAC------------------TYNSLINGLCKAGYLDQ 522
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
+M G +PD Y+Y+ L+ C+ + A L +EM D ++ +V YN ++
Sbjct: 523 AMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMN 582
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
GFC G + ++ M + ++ T+ L+ YC ++ S +Y MC + EP
Sbjct: 583 GFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEP 642
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+T +LI C R + EA +++ G T SY LI+ L ++ K EA K+
Sbjct: 643 NENTYNILIKGHCKARSMKEA-QYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKL 701
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+M +GF ++Y+ +ID E N+E L E+ E +
Sbjct: 702 FHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASI 745
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 143/268 (53%), Gaps = 16/268 (5%)
Query: 225 LDSDATAGIGKDVKRVVRV------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+D+ G K+ K V+ V +PNV T+N L+ G+ + V+ + +G
Sbjct: 280 VDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKH--------VFNAVGLMGV 331
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
PD +SY++++ C+ +R+ EA L++EM KN+ + V YN++I G C+ G ++ A +
Sbjct: 332 TPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWD 391
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI-GEL 397
EM G ++ +T+ L+NG C+ G +D AI + N M +G +P+ T+ +L+ G L
Sbjct: 392 LIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLL 451
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C +R+ A + + + K G P +Y +I G C+EG ++EA +Q++M G P+
Sbjct: 452 CKGKRLKNAQGLFQDLLDK-GYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPN 510
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+ I +++G + A L EM
Sbjct: 511 AITFKIIICALLEKGETDKAEKLLCEMI 538
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 1/237 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+R P + FN ++ F + + V + + +PD ++ ++L+ FC ++
Sbjct: 57 MRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINL 116
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A + ++ + D V T+I G C G++ +A F ++ G V++ L+N
Sbjct: 117 AFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLIN 176
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ G+ +AI + + + EP +I LC ++ V EA ++ VK G+
Sbjct: 177 GVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVK-GIS 235
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y +I G C GK+ EAL EMV K P + IY+ +D KEG V+ A
Sbjct: 236 ANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEA 292
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 26/269 (9%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ T L+ G +G +K ++ G D SY L+ C+ R A +
Sbjct: 130 QPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQ 189
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L + + E +VV YNTII C+ ++ A F EM + G+ ++ VT+ +++G+C
Sbjct: 190 LLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFC 249
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI--------LKARVV 415
G + A+ N+M K P+ L+ L + +V EA ++ LK V+
Sbjct: 250 IVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVI 309
Query: 416 KF------------------GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+ G+ P SY +I LC+ ++EEAL + EM K P+
Sbjct: 310 TYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPN 369
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
Y++ IDG K G + A L EM +
Sbjct: 370 TVTYNSLIDGLCKSGRISYAWDLIDEMHD 398
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 110/241 (45%), Gaps = 28/241 (11%)
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
EP+ Y+ ++ C+ + + EA L+ EM K + +VV Y+ II GFC +G++ A
Sbjct: 200 EPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALG 259
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA---------------ILVYNDMCR--- 380
F EM L + + LV+ + G V A ++ YN +
Sbjct: 260 FLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYA 319
Query: 381 ---------KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
G P+ + ++I LC +RV EAL++ K K + P +Y LI
Sbjct: 320 KHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQK-NMVPNTVTYNSLID 378
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
GLC+ G++ A + EM +G ++ Y++ I+G K G ++ A L +M + ++
Sbjct: 379 GLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQP 438
Query: 492 E 492
+
Sbjct: 439 D 439
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 133/287 (46%), Gaps = 31/287 (10%)
Query: 108 YATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRE--------CGSAPF 159
Y T++ L + + A++V+ V +++ P + + L+ Y + G P
Sbjct: 276 YNTLVDALHKEGKVKEAKNVLAVIVKTCLK-PNVITYNTLIDGYAKHVFNAVGLMGVTPD 334
Query: 160 V--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
V ++++I + I+++E +++ + + + + T N+LI + + + ++
Sbjct: 335 VWSYNIMIN---RLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWD 391
Query: 218 IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
+ E+ A NV T+N+L+ G + G +K + +M G
Sbjct: 392 LIDEMHDRGHHA----------------NVITYNSLINGLCKNGQLDKAIALINKMKDQG 435
Query: 278 CEPDCYSYSVLM-AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
+PD Y+ ++L+ + C+ +R++ A+ L++++ DK +V YN II G C+ G + A
Sbjct: 436 IQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEA 495
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
+M SG +++TF+ ++ G+ D A + +M +G
Sbjct: 496 YALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
+ F +++ + + + + + + K +P+ T+ +LI C ++ A +L +
Sbjct: 64 IQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVL-S 122
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+++K+G P + LIKGLC +G++++AL +++ +GF Y I+G K G
Sbjct: 123 KILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIG 182
Query: 473 NVEMATMLRKEM 484
A L + +
Sbjct: 183 ETRAAIQLLRRI 194
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 196/418 (46%), Gaps = 40/418 (9%)
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF 144
P LA++FF + + KH + SY ++ IL ++ V + L S + P L F
Sbjct: 7 PDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCS-PNLVTF 65
Query: 145 EVLVKTYRECGSA------------------PFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
++L++ + G A ++F++LI + N ++ V +
Sbjct: 66 KILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQ---AVKLFEN 122
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+ S + ++ T N +I + + + E+ E+ +++ + P+
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEM--------------IRKGGKSAPD 168
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ T+N L+ FYR + +M G PD + ++L++ C++ + EA ++ +
Sbjct: 169 IVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILD 228
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M+ DV+ YN+II C G++ A E + M S VTF L++G+C+AG
Sbjct: 229 GMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAG 285
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
+ A+ V +MCR+ P+ T +L+ LC +V A +L+ +V+ G P +Y
Sbjct: 286 MLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLE-EIVRQGYIPDVIAY 344
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
L+ GLC+ G++EEA K+ EM +G + +YS+ + GY + GNV A + EM
Sbjct: 345 TSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEM 402
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 199/461 (43%), Gaps = 72/461 (15%)
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALR-SPENDPKLK 142
NP A++ F S K + +Y T+I L ++ + AR+++ +R ++ P +
Sbjct: 112 NPDQAVKLFE-NMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIV 170
Query: 143 LFEVLVKTY------------RECGSAPFVFDLLIKCCLEVKNIEK---IETCVDIVRML 187
+ L+ + RE A + ++ C + V I K +E ++I+ +
Sbjct: 171 TYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGM 230
Query: 188 MSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNV 247
G V T N++I + V+ EI + + P++
Sbjct: 231 KLAGPVPDVITYNSIIHALCVAGKVVEAAEILK-------------------TMSCSPDL 271
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
TFN L+ GF + G + +V EM R PD +Y++L+ C +++ A L EE
Sbjct: 272 VTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEE 331
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
+ + DV+AY +++ G C+ GE+ A + +EM + G + V + LV+GYCRAG+
Sbjct: 332 IVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGN 391
Query: 368 VDSA---------------ILVYN--------------------DMCRKGFEPEGSTIEV 392
V A + YN D+ +G+ P+ T
Sbjct: 392 VHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNT 451
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI LC RV EA D L + G FP + + ++ GLC G++++A + EM K
Sbjct: 452 LIDGLCKANRVREACD-LADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRK 510
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
P++ +Y++ IDG K ++ A M+ M V +D
Sbjct: 511 RHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDD 551
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 116/247 (46%), Gaps = 6/247 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ TF L+ G + G + + + PD Y ++VL+ ++ +A KL
Sbjct: 60 PNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKL 119
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS--VTFEHLVNGY 362
+E M V+ ++V YNT+I G C+ G + +A E EM G +S+ VT+ L+N +
Sbjct: 120 FENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAF 179
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
RA + A M G P+ T +L+ +C V EAL+IL + G P
Sbjct: 180 YRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLA-GPVPD 238
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I LC GK+ EA ++ M P L ++ +DG+ K G + A + +
Sbjct: 239 VITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLE 295
Query: 483 EMFENQV 489
EM +
Sbjct: 296 EMCRENI 302
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 163/359 (45%), Gaps = 24/359 (6%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+Y +IIH L A + A ++++ SP+ L F L+ + + G P ++L +
Sbjct: 241 TYNSIIHALCVAGKVVEAAEILKTMSCSPD----LVTFNTLLDGFCKAGMLPRALEVLEE 296
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
C E + + T +V L G +V L+ E+ R +G I Y + +D
Sbjct: 297 MCRE-NILPDVITYTILVNGLCRVG---QVQVAFYLLEEIVR-QGYIPDVIAYTSL--VD 349
Query: 227 SDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
+G ++ ++V+ R V +++L+ G+ R G K ++ EM + P
Sbjct: 350 GLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVP 409
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
++Y++++ ++ + +A L ++ + DVV YNT+I G C+ + A +
Sbjct: 410 PLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLA 469
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
EM G + VT +V G CR G VD A + +M RK P LI LC
Sbjct: 470 DEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKS 529
Query: 401 RRVFEA---LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
R+ +A LD ++ + V F +Y LI + G++ EA+ + EMV +GF P
Sbjct: 530 DRMDDACMVLDAMRGQGVALDDF----AYRKLIVSMSHGGRVAEAMAMYDEMVARGFLP 584
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N L+ G + + D+ EMA GC P+ + ++ C R+ +A L
Sbjct: 444 PDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSL 503
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM K +VV Y ++I G C+ M A M GV + L+
Sbjct: 504 VVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSH 563
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
G V A+ +Y++M +GF P+GST + L
Sbjct: 564 GGRVAEAMAMYDEMVARGFLPDGSTSKTL 592
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 195/419 (46%), Gaps = 30/419 (7%)
Query: 81 LKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPK 140
L+ NP +L FF F + + ++ SY ++HILSR R+ D R L + K
Sbjct: 44 LRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMY----DETRAYLNQLVDLCK 99
Query: 141 LK-----LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
K +++ LV YRE +P VFD+++K +E K + K + + + G
Sbjct: 100 FKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVE-KGLTK--NALYVFDNMGKCGRIPS 156
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
+ +CN+L+ + + + + +Y+++ V + P+V + ++
Sbjct: 157 LRSCNSLLNNLVKNGETHTAHYVYQQMIR----------------VGIVPDVFMVSIMVN 200
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
F ++G ++ +M LG EP+ +Y L+ + + A+ + + M +K V
Sbjct: 201 AFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR 260
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMG-LSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
+VV Y +I G+C+ +M AE+ R M + + + L++GYCR G +D A+ +
Sbjct: 261 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 320
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
++M R G + LI C + + EA ++ R+V + L P SY L+ G C
Sbjct: 321 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI-TRMVDWNLKPDSYSYNTLLDGYC 379
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
EG EA + +M+ +G EP++ Y+ + G + G + A + M + V ++
Sbjct: 380 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDE 438
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 154/333 (46%), Gaps = 24/333 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALI------WEVSRGKGVIS------------GYE 217
KI+ V ++ ++ GL + CN+LI E+ +GVI+ Y
Sbjct: 313 KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYN 372
Query: 218 IYREVF---GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
+ + G S+A K ++ + P V T+N L+ G R GAF+ +W M
Sbjct: 373 TLLDGYCREGHTSEAFNLCDKMLQE--GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 430
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
+ G PD YS L+ + A LW+++ + + +NT+I G C++G+M
Sbjct: 431 KRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMV 490
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
AEE F +M G +T+ L++GYC+A +V A V M R+ P LI
Sbjct: 491 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLI 550
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
L RR+ E D+L ++ GL P +Y LI G C+EG +++A EM G
Sbjct: 551 SGLFKSRRLVEVTDLLTEMGIR-GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 609
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++ I S + G + G ++ A +L ++M ++
Sbjct: 610 SANIIICSTMVSGLYRLGRIDEANLLMQKMVDH 642
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+ AL+ G+ +EG +K + EM G + S +++ R+ EA L
Sbjct: 576 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 635
Query: 305 WEEMRDKN--------VEHDV------------------------VAYNTIIGGFCEIGE 332
++M D ++ D+ + YN I G C+ G+
Sbjct: 636 MQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGK 695
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A FF + L G + T+ L++GY AG+VD A + ++M R+G P T
Sbjct: 696 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 755
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI LC V A + ++ + GLFP +Y LI G C+ G M+ A K++ +M+ +
Sbjct: 756 LINGLCKSENVDRAQRLFH-KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEE 814
Query: 453 GFEPSLE 459
G PS++
Sbjct: 815 GISPSIQ 821
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 39/272 (14%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE-------------- 294
TFN ++ G + G + E+++ +M LGC PD +Y L+ +C+
Sbjct: 475 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 534
Query: 295 ---------------------ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
RR+ E L EM + + ++V Y +I G+C+ G +
Sbjct: 535 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 594
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+A + EM +G+ ++ + +V+G R G +D A L+ M GF P+
Sbjct: 595 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 654
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+++ ++LD K L P Y I GLC+ GK+++A + + + KG
Sbjct: 655 DIRYAAIQKIADSLD----ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 710
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
F P Y I GY GNV+ A LR EM
Sbjct: 711 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 742
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 126/279 (45%), Gaps = 33/279 (11%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ +N+L+ G ++ +V D+ EM G P+ +Y L+ +C+E + +A
Sbjct: 539 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 598
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG--------------- 347
+ EM + + +++ +T++ G +G + A ++M G
Sbjct: 599 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRY 658
Query: 348 -----------------VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
+ +++ + + G C+ G VD A ++ + KGF P+ T
Sbjct: 659 AAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTY 718
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
LI V EA L+ +++ GL P +Y LI GLC+ ++ A ++ ++
Sbjct: 719 CTLIHGYSAAGNVDEAFR-LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLH 777
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
KG P++ Y+ IDGY K GN++ A L+ +M E +
Sbjct: 778 QKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGI 816
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 125/501 (24%), Positives = 215/501 (42%), Gaps = 70/501 (13%)
Query: 41 LIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSL 100
L+ LL HR + L S S LTP ++ +P AL F +
Sbjct: 42 LLGRFTRLLLLHRFPAAERLLAS--SSPLTPALLQAALRRVRLDPDAALHLFRLAPSRP- 98
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
SL S+A ++HIL+RAR AR ++ + P +P LF L + YR+ +
Sbjct: 99 ---SLVSHAQLLHILARARRFHDARALL--SSLPPHAEP---LFPHLAEVYRDFTFSAVS 150
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN---------------ALIWE 205
FDLL++ + ++ + +++ + G + +CN A+++
Sbjct: 151 FDLLLRAHADAG---QLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYG 207
Query: 206 VSRGKGVIS-------------------------------GYEIYREVFGLDSDATAGIG 234
R GV+ G E+ + D G+G
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267
Query: 235 --KDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSY 285
+D +R++ + PNV T+ L+ G+ ++G E+ E V EM G D +Y
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAY 327
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+++ +C+ RM +A ++ EMRD + ++ YNT+I G C++G M ++ +EM
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED 387
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G+ ++ L++GYCR G + A + M R G T L+ C + +
Sbjct: 388 VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDD 447
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
AL L ++K G+ P E S L+ GL + GK E+AL + E + +G ++ ++ I
Sbjct: 448 ALR-LWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506
Query: 466 DGYMKEGNVEMATMLRKEMFE 486
+G K G + A L M E
Sbjct: 507 NGLCKIGRMAEAEELLDRMKE 527
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 118/237 (49%), Gaps = 3/237 (1%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N L+ GF A + +W M + G P+ S S L+ + + +A LW+E
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKET 490
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + +V+ +NT+I G C+IG MA AEE M S+T+ L +GYC+ G +
Sbjct: 491 LARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQL 550
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLI-GELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+A + N M GF P I G K+ + ++ + + + GL P +Y
Sbjct: 551 GTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQ--WHKVNDIHSEMSARGLSPNLVTYG 608
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LI G C+EG + EA + EMV G P++ I SA + + KEG V+ A ++ +++
Sbjct: 609 ALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKL 665
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 123/284 (43%), Gaps = 36/284 (12%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
R + N+ +N ++ G + G E+V+ V EM +G PD YSY+ L+ +C E M
Sbjct: 351 RDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSM 410
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
R+A ++ M + + YNT++ GFC + + A + M GV + ++ L
Sbjct: 411 RKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTL 470
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++G +AG + A+ ++ + +G T +I LC R+ EA ++L R+ +
Sbjct: 471 LDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLD-RMKELR 529
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEAL----------------------------------- 443
P +Y L G C+ G++ A
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN 589
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ +EM +G P+L Y A I G+ KEGN+ A L EM N
Sbjct: 590 DIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNN 633
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 182/440 (41%), Gaps = 83/440 (18%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR--VALRSPEN-------- 137
AL + T + L K+ ++ + T+I+ L + + A +++ LR P +
Sbjct: 483 ALNLWKETLARGLAKNVIT-FNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLF 541
Query: 138 DPKLKLFEV-----LVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSR 190
D KL ++ L+ G AP V F+ I K K+ DI + +R
Sbjct: 542 DGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN---DIHSEMSAR 598
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTF 250
GLS + T ALI + + +Y E+ + PNV
Sbjct: 599 GLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNG----------------MNPNVFIC 642
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDC--------------------------YS 284
+ALM FY+EG ++ V ++ + P C
Sbjct: 643 SALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVM 702
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
++V++ C+ R+ +A+ L+E +R+K D Y+++I G G + A M
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML 762
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
+G+ + +T+ L+ G C++G + A+ ++N + KG P G T LI E C + +
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
EA LK ++V EEG MEEA+K+ +M+ +P+ Y
Sbjct: 823 EAFK-LKQKMV-------------------EEGYMEEAIKLLDQMIENNVDPNYITYCTL 862
Query: 465 IDGYMKEGNVEMATMLRKEM 484
I GY+K GN+E + L EM
Sbjct: 863 IHGYIKSGNMEEISKLYDEM 882
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 158/362 (43%), Gaps = 46/362 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI---------------YR 220
K E +++ + ++RGL+ V T N +I + + + E+ YR
Sbjct: 479 KTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYR 538
Query: 221 EVFG----LDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+F L TA + + P+V FN+ + G + + KV D+ EM+
Sbjct: 539 TLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSAR 598
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G P+ +Y L+A +C+E + EA L+ EM + + +V + ++ F + G++ A
Sbjct: 599 GLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA 658
Query: 337 EEFFREM---------GLSGVE-----------------SSSVTFEHLVNGYCRAGDVDS 370
+++ +S +E S++V + ++ G C++G +
Sbjct: 659 NLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIAD 718
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A ++ + K F P+ T LI + EA L+ ++ GL P +Y LI
Sbjct: 719 AKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFS-LRDVMLSAGLTPNIITYNSLI 777
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
GLC+ GK+ A+ + ++ KG P+ Y+ ID Y KEG A L+++M E
Sbjct: 778 YGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYM 837
Query: 491 QE 492
+E
Sbjct: 838 EE 839
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 113/244 (46%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+F+ L+ G +V+ M ++GC P S + L+ + A ++ +M
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
R V D + +C G +A+A EF EM G+E + V + +++ YC G
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT 269
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A + + RKG P T +L+ C R+ EA ++K + E +Y
Sbjct: 270 EDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+I G C+ G+M++A +V+ EM G +L +Y+ I+G K G +E + +EM +
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389
Query: 489 VRQE 492
+R +
Sbjct: 390 MRPD 393
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 16/130 (12%)
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC- 293
+DV + PN+ T+N+L+ G + G + +++ ++ G P+ +Y+ L+ +C
Sbjct: 758 RDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCK 817
Query: 294 ---------------EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
EE M EA KL ++M + NV+ + + Y T+I G+ + G M +
Sbjct: 818 EGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISK 877
Query: 339 FFREMGLSGV 348
+ EM + G+
Sbjct: 878 LYDEMHIRGL 887
>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Brachypodium distachyon]
Length = 968
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 229/508 (45%), Gaps = 69/508 (13%)
Query: 28 TSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHL 87
T + ++H + ++++S+LT HR ++ NH+ +F ++ K + L
Sbjct: 40 TRIGATTTTRAHGVESSIISVLTMHRWET-LNHM---------AYKFGKLD---KGHGKL 86
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR-VALRSPENDPKLKLFEV 146
AL+ S +S + Y IL++A++ A +++ +A+ +F
Sbjct: 87 ALKILSSIVQRSGLERITHIYCMAAQILTQAKMHSQAMSLLKHLAMTGFSCSA---VFSS 143
Query: 147 LVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI--- 203
L+ T C S P VFDLL+ ++ K + ++ + I+ M + G CNA++
Sbjct: 144 LLCTISRCDSNPLVFDLLVNAYVKEKRV--VDASMAILFM-DNCGFKASAHACNAVLNAL 200
Query: 204 WEVSRGK--------GVISGY--EIYREVFGLDSDATAGIGKDVKRVVRVR-----PNVH 248
E+ K G++ + ++ L+S G K K ++ PNV
Sbjct: 201 VEIGESKHVWFFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSLPNVI 260
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N ++ + ++G F+ V +M + G E D Y+Y++++ C+ +R A L + M
Sbjct: 261 TYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRM 320
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
R N+ D YNT+I GF + +M A F EM G++ S T+ L++GYCR G +
Sbjct: 321 RGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTI 380
Query: 369 D---------------------SAIL---------VYNDMCRKGFEPEGSTIEVLIGELC 398
D SA+L VY++M + G P+ T L+ LC
Sbjct: 381 DEALRVLYEMQVAGVKPSEVTYSAMLNGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLC 440
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ +A + + +V +K+ L+ G+C G ++EAL + +MV F P +
Sbjct: 441 KGGHLVQAKEFMSC-IVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDI 499
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFE 486
Y+ + G+ ++G + A +L + M E
Sbjct: 500 HTYTILLSGFCRKGKIVPAVILLQMMLE 527
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 132/275 (48%), Gaps = 37/275 (13%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T NAL++G G+ ++ D+ +M + PD ++Y++L++ FC + ++ A L + M
Sbjct: 466 TLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMM 525
Query: 309 RDKNVEHDVV------------------------------------AYNTIIGGFCEIGE 332
+K + D+V AYN+++ G+ + G+
Sbjct: 526 LEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGK 585
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ + E +M + V + ++ L++G+ + G + +I +Y DM RKG +P T +
Sbjct: 586 LHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRL 645
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI L + A+ L V++ G++P S+ LI E+ +M +AL++ M
Sbjct: 646 LILGLSKHGMIEIAVKFLDKMVLE-GIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWL 704
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
PS + YSA I+G +++ ++ + + ++M E+
Sbjct: 705 YMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVES 739
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 120/255 (47%), Gaps = 3/255 (1%)
Query: 238 KRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
K +VR ++P T+ L++G + G E +M G PD S+ VL+ F E+
Sbjct: 629 KDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEK 688
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
RM +A +L+ M+ + Y+ +I G + + + R+M SG+E +
Sbjct: 689 SRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHY 748
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+N CR GD++ A + +M G P ++ L +V E + I+ ++
Sbjct: 749 IALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGI-IVFCSII 807
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ G+ PT ++ L+ GLC+E K+ +AL +++ M G + + Y+ I G K V
Sbjct: 808 RAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVS 867
Query: 476 MATMLRKEMFENQVR 490
A L +EM +R
Sbjct: 868 DALELYEEMKSKGLR 882
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 138/303 (45%), Gaps = 22/303 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF---GLDSDATAG 232
KI V +++M++ +GL + T L+ + + V + +++E+ G+ +D A
Sbjct: 514 KIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIA- 572
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+N++M G+ + G KVE +M + P+ SY++LM
Sbjct: 573 -----------------YNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGH 615
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
++ + + L+++M K ++ V Y +I G + G + A +F +M L G+
Sbjct: 616 IKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDR 675
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
++F+ L+N + + A+ ++N M P T +I L K + + D+L+
Sbjct: 676 LSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLR- 734
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+V+ GL P Y+ LI C G + A +++ EM G P+ S+ + G K G
Sbjct: 735 DMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCG 794
Query: 473 NVE 475
VE
Sbjct: 795 KVE 797
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 117/255 (45%), Gaps = 5/255 (1%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
+V V+P+ T++A++ G E AF V+ M + GC PD Y+Y L+ C+ +
Sbjct: 391 QVAGVKPSEVTYSAMLNGSVHE-AFS----VYDNMEKYGCSPDVYTYRNLLRGLCKGGHL 445
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+A++ + D N ++ G C G + A + +M T+ L
Sbjct: 446 VQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTIL 505
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++G+CR G + A+++ M KG P+ T L+ L + +V A + + + K G
Sbjct: 506 LSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEG 565
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
++ +Y ++ G + GK+ + +M P+ Y+ + G++K+G++ +
Sbjct: 566 MYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSI 625
Query: 479 MLRKEMFENQVRQED 493
L K+M ++ +
Sbjct: 626 YLYKDMVRKGIKPTN 640
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T++A++ G R+ + DV +M G EP Y L+ C + A +L
Sbjct: 708 PSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRL 767
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EEM + VA ++I+ G + G++ F + +G+ + TF L++G C+
Sbjct: 768 KEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCK 827
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ A+ + + M G + + T VLI LC + V +AL++ + K GL P
Sbjct: 828 EAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSK-GLRPNVT 886
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+Y L + + G+ E K+ ++ +G PS
Sbjct: 887 TYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPS 919
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 85/213 (39%), Gaps = 2/213 (0%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C+ + + +L+ + +E+R+ +A M + + A N ++ EIGE
Sbjct: 151 CDSNPLVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVW 210
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
F +E + T ++N C G++ A + + M + P T ++
Sbjct: 211 FFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKM-KSCSLPNVITYNTILHWY 269
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
K R A+ +L+ + K G+ +Y +I LC+ + A + M G P
Sbjct: 270 VKKGRFKAAMCVLE-DMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPD 328
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
Y+ I G+ E + +A + EM ++
Sbjct: 329 ECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLK 361
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 131/569 (23%), Positives = 235/569 (41%), Gaps = 115/569 (20%)
Query: 24 SQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQ--IALGL 81
+ FST++ T +QS N + + SLL + W L+ S P + + + L +
Sbjct: 30 NSFSTNADT---NQSDNTVKEITSLL----KQKNWQFLI---ESSPLPNKLNPDVVFLVI 79
Query: 82 KNN----PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN 137
K N P FF++ +++ +LS+++ + IL + L G A +V+ + +
Sbjct: 80 KQNQVIDPKRLHGFFNWVNSRTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDT--R 137
Query: 138 DPKLKLFEVLVKTYRECGSAPFV-----FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGL 192
+P +K+ + ++K Y+E + F++LI + + V + +
Sbjct: 138 NPHVKILDSIIKCYKEINGSSSSSSVVVFEILIDI---YRKKGFLNEAVSVFLGAKTNEF 194
Query: 193 SVKVSTCNALIWEVSRGKGVISGYEIYREVFGL---DSDATAGIGKDVKRVVRVR----- 244
V ++ CN+L ++ +G V +++Y+ + G D + RV +V
Sbjct: 195 IVGLACCNSLSKDLLKGNRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHV 254
Query: 245 ----------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
PN+ T++ ++ G R G ++ ++ MA G PD Y Y+ L+ FC
Sbjct: 255 LFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCR 314
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF--------------------------- 327
++R E + + +EM ++ D VAY +I GF
Sbjct: 315 QKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFT 374
Query: 328 --------CEIGEMARAEEFFREMGLSGVESSSVTFEHL--------------------- 358
C+IG++ +AE+ F EM + G++ T+ L
Sbjct: 375 YYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIK 434
Query: 359 --------------VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
VNG C GD+ A ++ +M G +P ++ L + R
Sbjct: 435 KENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFE 494
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
EA+ IL + GL P Y +I G C+ GKMEE EM+ KG +P++ Y AF
Sbjct: 495 EAIKILGVMKDQ-GLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAF 553
Query: 465 IDGYMKEGNVEMATMLRKEMFENQVRQED 493
I GY + G ++ A EM ++ + D
Sbjct: 554 IHGYCRAGEMQAAERSFIEMLDSGIAPND 582
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 156/327 (47%), Gaps = 24/327 (7%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
++ LI+ +V+N+EK +++ + L+ C A++ + + E++
Sbjct: 409 TYNCLIEGYYKVQNMEK---AYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELF 465
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
+E+ ++PN+ + ++ G +EG FE+ + M G
Sbjct: 466 QEMISWG----------------LKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLS 509
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD + Y+ ++ FC+ +M E + EM K ++ +V Y I G+C GEM AE
Sbjct: 510 PDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERS 569
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F EM SG+ + V L++GYC+ G+ A + M +G P+ T VLI L
Sbjct: 570 FIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSK 629
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
++ EA+ + + ++ GL P +Y LI LC+EG ++ A ++ +M KG P++
Sbjct: 630 NGKLQEAMGVF-SELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIV 688
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFE 486
Y+A I+G K G + A +E+F+
Sbjct: 689 TYNALINGLCKLGEIAKA----RELFD 711
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 119/236 (50%), Gaps = 1/236 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+++ N T+ AL+ G + G EK ED++ EM +G +PD +Y+ L+ + + + M +A
Sbjct: 367 KIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKA 426
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L E++ +N+ + I+ G C G++ RA E F+EM G++ + V + +V G
Sbjct: 427 YELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKG 486
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ G + AI + M +G P+ +I C ++ E L + K GL P
Sbjct: 487 LVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAK-GLKP 545
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y I G C G+M+ A + EM+ G P+ I + IDGY K+GN A
Sbjct: 546 NVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKA 601
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 130/247 (52%), Gaps = 2/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T + L+ G + G ++ V+ E+ G PD ++Y+ L++ C+E ++ A
Sbjct: 613 VLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAF 672
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L ++M K + ++V YN +I G C++GE+A+A E F + G+ +SVT+ ++ GY
Sbjct: 673 ELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGY 732
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++ ++ A +++ M G P+ LI C +AL + +V+ G+ T
Sbjct: 733 CKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLG-MVEEGIAST 791
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ LI G + GK+ EA ++ +MV P+ Y+ I+ + GN++ A L
Sbjct: 792 P-AFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFM 850
Query: 483 EMFENQV 489
EM + V
Sbjct: 851 EMQKRNV 857
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 37/282 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEM----------------------------- 273
++PNV+T+ A + G+ R G + E ++EM
Sbjct: 543 LKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAF 602
Query: 274 ARLGCE------PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
A+ C PD ++SVL+ + +++EA ++ E+ DK + DV Y ++I
Sbjct: 603 AKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNL 662
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ G++ A E +M G+ + VT+ L+NG C+ G++ A +++ + KG
Sbjct: 663 CKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNS 722
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T +I C + EA + + G+ P Y LI G C+ G E+AL +
Sbjct: 723 VTYSTIIAGYCKSANLTEAFQLFHGMKL-VGVPPDSFVYCALIDGCCKAGNTEKALSLFL 781
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
MV +G S ++A IDG+ K G + A L ++M +N +
Sbjct: 782 GMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHI 822
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 139/315 (44%), Gaps = 18/315 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K++ + + L+ +GL V T +LI + + + + +E++ D GI
Sbjct: 632 KLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELH------DDMCKKGI-- 683
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
PN+ T+NAL+ G + G K +++ + G + +YS ++A +C+
Sbjct: 684 --------NPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKS 735
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ EA +L+ M+ V D Y +I G C+ G +A F M G+ +S+ F
Sbjct: 736 ANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAF 794
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G+ + G + A + DM P T +LI C + EA + L +
Sbjct: 795 NALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEA-EQLFMEMQ 853
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K + P +Y L+ G G+ E + EMV +G +P +S +D ++KEGN
Sbjct: 854 KRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWI 913
Query: 476 MATMLRKEMFENQVR 490
A L +M V
Sbjct: 914 KALKLVDDMLSEGVN 928
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 249 TFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
FNAL+ GF++ G A++ VED M P+ +Y++L+ C ++EAE+L
Sbjct: 793 AFNALIDGFFKLGKLIEAYQLVED----MVDNHITPNHVTYTILIEYHCTVGNIKEAEQL 848
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM+ +NV +V+ Y +++ G+ IG + F EM G++ + + +V+ + +
Sbjct: 849 FMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLK 908
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ A+ + +DM +G + +LI LC + E L +L V K G +
Sbjct: 909 EGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLD-EVEKQGSKLSLA 967
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMV 450
+ L+ G+ +EAL+V MV
Sbjct: 968 TCGTLVCCFHRAGRTDEALRVLESMV 993
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 117/246 (47%), Gaps = 2/246 (0%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
++V V P+ + AL+ G + G EK +++ M G +++ L+ F + ++
Sbjct: 749 KLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKL 807
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EA +L E+M D ++ + V Y +I C +G + AE+ F EM V + +T+ L
Sbjct: 808 IEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSL 867
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++GY R G ++++M +G +P+ V++ + +AL ++ + + G
Sbjct: 868 LHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSE-G 926
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ + Y LI LC+ + E LKV E+ +G + SL + + + G + A
Sbjct: 927 VNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEAL 986
Query: 479 MLRKEM 484
+ + M
Sbjct: 987 RVLESM 992
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 156/391 (39%), Gaps = 55/391 (14%)
Query: 34 PSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFS 93
P Q+H+++ + L + + + L GL P F+ +L + N +
Sbjct: 615 PDVQTHSVL--IHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSL-ISNLCKEGDLKAA 671
Query: 94 FTQHKSLCKHSLS----SYATIIHILSRARLIGPARD-------------------VIRV 130
F H +CK ++ +Y +I+ L + I AR+ +I
Sbjct: 672 FELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAG 731
Query: 131 ALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLM 188
+S +LF + + G P FV+ LI C + N EK + + ++
Sbjct: 732 YCKSANLTEAFQLFHGM----KLVGVPPDSFVYCALIDGCCKAGNTEK---ALSLFLGMV 784
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG-------------LDSDATAGIGK 235
G++ NALI + +I Y++ ++ ++ T G K
Sbjct: 785 EEGIA-STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIK 843
Query: 236 DVKRVV------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
+ +++ V PNV T+ +L+ G+ R G ++ ++ EM G +PD ++SV++
Sbjct: 844 EAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMV 903
Query: 290 AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
+E +A KL ++M + V Y +I C+ ++ + E+ G +
Sbjct: 904 DAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSK 963
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
S T LV + RAG D A+ V M R
Sbjct: 964 LSLATCGTLVCCFHRAGRTDEALRVLESMVR 994
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 125/501 (24%), Positives = 215/501 (42%), Gaps = 70/501 (13%)
Query: 41 LIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSL 100
L+ LL HR + L S S LTP ++ +P AL F +
Sbjct: 42 LLGRFTRLLLLHRFPAAERLLAS--SSPLTPALLQAALRRVRLDPDAALHLFRLAPSRP- 98
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
SL S+A ++HIL+RAR AR ++ + P +P LF L + YR+ +
Sbjct: 99 ---SLVSHAQLLHILARARRFHDARALL--SSLPPHAEP---LFPHLAEVYRDFTFSAVS 150
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN---------------ALIWE 205
FDLL++ + ++ + +++ + G + +CN A+++
Sbjct: 151 FDLLLRAHADAG---QLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYG 207
Query: 206 VSRGKGVIS-------------------------------GYEIYREVFGLDSDATAGIG 234
R GV+ G E+ + D G+G
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267
Query: 235 --KDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSY 285
+D +R++ + PNV T+ L+ G+ ++G E+ E V EM G D +Y
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAY 327
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+++ +C+ RM +A ++ EMRD + ++ YNT+I G C++G M ++ +EM
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED 387
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G+ ++ L++GYCR G + A + M R G T L+ C + +
Sbjct: 388 VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDD 447
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
AL L ++K G+ P E S L+ GL + GK E+AL + E + +G ++ ++ I
Sbjct: 448 ALR-LWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506
Query: 466 DGYMKEGNVEMATMLRKEMFE 486
+G K G + A L M E
Sbjct: 507 NGLCKIGRMAEAEELLDRMKE 527
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 193/440 (43%), Gaps = 64/440 (14%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR--VALRSPEN-------- 137
AL + T + L K+ ++ + T+I+ L + + A +++ LR P +
Sbjct: 483 ALNLWKETLARGLAKNVIT-FNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLF 541
Query: 138 DPKLKLFEV-----LVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSR 190
D KL ++ L+ G AP V F+ I K K+ DI + +R
Sbjct: 542 DGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN---DIHSEMSAR 598
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTF 250
GLS + T ALI + + +Y E+ + PNV
Sbjct: 599 GLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNG----------------MNPNVFIC 642
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDC--------------------------YS 284
+ALM FY+EG ++ V ++ + P C
Sbjct: 643 SALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVM 702
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
++V++ C+ R+ +A+ L+E +R+K D Y+++I G G + A M
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML 762
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
+G+ + +T+ L+ G C++G + A+ ++N + KG P G T LI E C + +
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
EA LK ++V+ G+ PT +Y LI GLC +G MEEA+K+ +M+ +P+ Y
Sbjct: 823 EAFK-LKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTL 881
Query: 465 IDGYMKEGNVEMATMLRKEM 484
I GY+K GN+E + L EM
Sbjct: 882 IHGYIKSGNMEEISKLYDEM 901
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 118/237 (49%), Gaps = 3/237 (1%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N L+ GF A + +W M + G P+ S S L+ + + +A LW+E
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKET 490
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + +V+ +NT+I G C+IG MA AEE M S+T+ L +GYC+ G +
Sbjct: 491 LARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQL 550
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLI-GELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+A + N M GF P I G K+ + ++ + + + GL P +Y
Sbjct: 551 GTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQ--WHKVNDIHSEMSARGLSPNLVTYG 608
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LI G C+EG + EA + EMV G P++ I SA + + KEG V+ A ++ +++
Sbjct: 609 ALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKL 665
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 123/284 (43%), Gaps = 36/284 (12%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
R + N+ +N ++ G + G E+V+ V EM +G PD YSY+ L+ +C E M
Sbjct: 351 RDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSM 410
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
R+A ++ M + + YNT++ GFC + + A + M GV + ++ L
Sbjct: 411 RKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTL 470
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++G +AG + A+ ++ + +G T +I LC R+ EA ++L R+ +
Sbjct: 471 LDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLD-RMKELR 529
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEAL----------------------------------- 443
P +Y L G C+ G++ A
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN 589
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ +EM +G P+L Y A I G+ KEGN+ A L EM N
Sbjct: 590 DIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNN 633
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 127/272 (46%), Gaps = 27/272 (9%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V FN+ + G + + KV D+ EM+ G P+ +Y L+A +C+E + EA L
Sbjct: 567 PSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNL 626
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM---------GLSGVE------ 349
+ EM + + +V + ++ F + G++ A +++ +S +E
Sbjct: 627 YFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISH 686
Query: 350 -----------SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
S++V + ++ G C++G + A ++ + K F P+ T LI
Sbjct: 687 VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCA 746
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ EA L+ ++ GL P +Y LI GLC+ GK+ A+ + ++ KG P+
Sbjct: 747 ASGSIDEAFS-LRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNG 805
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
Y+ ID Y KEG A L+++M E ++
Sbjct: 806 ITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQ 837
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 113/244 (46%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+F+ L+ G +V+ M ++GC P S + L+ + A ++ +M
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
R V D + +C G +A+A EF EM G+E + V + +++ YC G
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT 269
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A + + RKG P T +L+ C R+ EA ++K + E +Y
Sbjct: 270 EDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+I G C+ G+M++A +V+ EM G +L +Y+ I+G K G +E + +EM +
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389
Query: 489 VRQE 492
+R +
Sbjct: 390 MRPD 393
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 1/208 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N ++ G + G + ++ + PD ++YS L+ + EA L + M
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML 762
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ +++ YN++I G C+ G+++RA F ++ G+ + +T+ L++ YC+ G
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + M +G +P T +LI LC + + EA+ +L ++++ + P +Y L
Sbjct: 823 EAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLD-QMIENNVDPNYITYCTL 881
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPS 457
I G + G MEE K+ EM +G P+
Sbjct: 882 IHGYIKSGNMEEISKLYDEMHIRGLLPT 909
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 86/151 (56%)
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+DV + PN+ T+N+L+ G + G + +++ ++ G P+ +Y+ L+ +C+
Sbjct: 758 RDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCK 817
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E + EA KL ++M ++ ++ V+ Y+ +I G C G M A + +M + V+ + +T
Sbjct: 818 EGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYIT 877
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
+ L++GY ++G+++ +Y++M +G P
Sbjct: 878 YCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 186/407 (45%), Gaps = 29/407 (7%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
SY T+IH L + + A+ +I V + +F +++T S +VF LI
Sbjct: 2 SYCTMIHFLCTHQXLSEAKSLIEVVVSRKGKGSASAVFAAVLETXGNQRSDIYVFSGLIT 61
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
LE + C + R L V TC ++ + + K + Y E+
Sbjct: 62 AYLESGFLRDAIECYRLTR---EHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 118
Query: 227 ----------------SDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFEKVE 267
D + + V + +RP+V ++N LM G+ R G ++
Sbjct: 119 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 178
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
+ M G +PD Y+YSVL+ C+E +M A L++EM K + + V + T+I G
Sbjct: 179 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGH 238
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ G + A E +++M + +T+ L+ G C+ GD+ A + ++M KG +P+
Sbjct: 239 CKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 298
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI C + + A + K R+++ + + +Y LI GLC+EG+ +A K+
Sbjct: 299 FTYTTLIDGCCKEGDLDTAFEHRK-RMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 357
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
EM+ G +P Y+ ++ + K+G+V + L KEM Q DG
Sbjct: 358 EMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEM------QRDG 398
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 81/150 (54%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++ D+ EM+ G +PD ++Y+ L+ C+E + A +
Sbjct: 261 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEH 320
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C+ G AE+ REM G++ + T+ +VN +C+
Sbjct: 321 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCK 380
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 381 KGDVWKGSKLLKEMQRDGHAPSVVTYNVLM 410
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ L + T N LI+ + + + +++ +D + G+
Sbjct: 243 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDL------IDEMSMKGL-- 294
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 295 --------KPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL----DDVAYTALISG 342
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM ++ D Y I+ FC+ G++ + + +EM G S
Sbjct: 343 LCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPS 402
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 403 VVTYNVLMNG 412
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 231/518 (44%), Gaps = 63/518 (12%)
Query: 27 STSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSG---LTPTQFSQIALGLKN 83
+++ S PP ++H V+S + + N+ + G + P F ++ +
Sbjct: 36 TSNHSAPPFSETH--FQDVISKSIREKPSNFSNYYWLSHQFGPVIVDPDLFVRVLSSFRT 93
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSP-------- 135
+P +ALR F + + + + S + I+ IL++ L+ A V+ + +
Sbjct: 94 SPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVL 153
Query: 136 -----ENDPKLKLFEVLVKTY------RECGSAPFVFDLLIKCCL--EVKNIEKI----- 177
++ +K+ ++L+ Y +C S VFD +IK L +VKN +I
Sbjct: 154 IGGCVSSEVSVKILDLLIWVYSKKSMVEQCLS---VFDKMIKSRLSPDVKNCNRILRILR 210
Query: 178 -----ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE----------- 221
V++ R + G+ + T N L+ +G V G ++ E
Sbjct: 211 DKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDV 270
Query: 222 -----VFGLDS-----DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
+ GL A IG+ +K ++V + +T+N L+ G++ +G + +
Sbjct: 271 TYNVLINGLSKKGEFEQAKGLIGEMLKTGLKV--SAYTYNPLIYGYFNKGMLAEALSLQE 328
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM G P +Y+ + C+ RM +A + +M N+ DVV+YNT+I G+C +G
Sbjct: 329 EMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLG 388
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ +A F E+ + + VT+ L++G CR G+++ A + +M +G P+ T
Sbjct: 389 NLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYT 448
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+L+ C + A + ++ GL +Y I G + G A +Q EM+
Sbjct: 449 ILVNGSCKMGSLSMAQEFFD-EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLA 507
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
KGF P L IY+ +DG K GN+E A+ L ++M + V
Sbjct: 508 KGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGV 545
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 146/300 (48%), Gaps = 17/300 (5%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
+G S V+T N+ I+ + + G SDA + + + P+V +
Sbjct: 333 KGASPTVATYNSFIYGLCK--------------LGRMSDAMQQLSDMLAN--NLLPDVVS 376
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N L+ G+ R G K ++ E+ + P +Y+ L+ C + + A++L EM
Sbjct: 377 YNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMI 436
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
++ + D+V Y ++ G C++G ++ A+EFF EM G+E S + + G + GD
Sbjct: 437 NEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTS 496
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + +M KGF P+ V++ LC + EA ++L+ ++V G+ P +Y +
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQ-KMVSDGVIPDYVTYTSI 555
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I E G++ + ++ EM+ KG PS+ Y+ I G+ +G +E A + EM E +
Sbjct: 556 IHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGI 615
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 148/341 (43%), Gaps = 52/341 (15%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+++ L V + N LI+ R ++ + ++ E+ R + + P
Sbjct: 365 MLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL----------------RSIYLFPT 408
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ T+N L+ G R+G E + + VEM G PD +Y++L+ C+ + A++ ++
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFD 468
Query: 307 EMRDKNVE-----------------------------------HDVVAYNTIIGGFCEIG 331
EM + +E D++ YN ++ G C++G
Sbjct: 469 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 528
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A E ++M GV VT+ +++ + G + ++ +M KG P T
Sbjct: 529 NLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYT 588
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
VLI K R+ A I + + + G+ P +Y LI GLC+ +M++A AEMV
Sbjct: 589 VLIHGHAGKGRLERAF-IYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVE 647
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
KG P+ Y+ I+ GN + A L K+M + V+ +
Sbjct: 648 KGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPD 688
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 1/218 (0%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
+ + +VG + G + + EM G PD Y+V++ C+ + EA +L ++
Sbjct: 480 YAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 539
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M V D V Y +II E G + + E F EM G+ S VT+ L++G+ G
Sbjct: 540 MVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGR 599
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
++ A + +++M KG P T LI LC RR+ +A + A +V+ G+FP + SY
Sbjct: 600 LERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFF-AEMVEKGIFPNKYSYT 658
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
LI C G +EAL + +M+ +G +P +SA +
Sbjct: 659 ILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 100/196 (51%), Gaps = 1/196 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ +N ++ G + G E+ ++ +M G PD +Y+ ++ E R+R+ ++
Sbjct: 512 PDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREI 571
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM K + VV Y +I G G + RA +F EM G+ + +T+ L+NG C+
Sbjct: 572 FYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCK 631
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+D A + +M KG P + +LI E C+ EAL + K +++ G+ P
Sbjct: 632 VRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYK-QMLDRGVQPDSC 690
Query: 425 SYMFLIKGLCEEGKME 440
++ L+K L ++ K++
Sbjct: 691 THSALLKQLGKDCKLQ 706
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ T+ +++ G K +++ EM G P +Y+VL+ + R+ A
Sbjct: 545 VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAF 604
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EM++K + +V+ YN++I G C++ M +A FF EM G+ + ++ L+N
Sbjct: 605 IYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINEN 664
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
C G+ A+ +Y M +G +P+ T L+ +L
Sbjct: 665 CNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 102/221 (46%), Gaps = 23/221 (10%)
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
W E ++ G + + ++ + + MR A + E + + N+ H +V + +IGG C
Sbjct: 104 WAE-SQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANM-HRIV--DVLIGG-CV 158
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
E+ S + L+ Y + V+ + V++ M + P+
Sbjct: 159 SSEV-----------------SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKN 201
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
++ L DK + +A+++ + + +FG+ PT +Y L+ C+ GK+++ L + +EM
Sbjct: 202 CNRILRILRDKDLMSKAVEVYRT-MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEM 260
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+G P+ Y+ I+G K+G E A L EM + ++
Sbjct: 261 QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLK 301
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 133/245 (54%), Gaps = 1/245 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ +V+T+N+L+ G R G +++V M G PD +++++L+ C+E ++ EA+
Sbjct: 212 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQ 271
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ E M K E D++ YNT++ G C +G++ A + F + G++ + ++ L+NGY
Sbjct: 272 QILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGY 331
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ +D A ++ +M KG +P T LIG LC RV A + + G F
Sbjct: 332 CKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLF-VEMQTCGQFLK 390
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ GLC+ G +EEA+ + + +P++E++S +DG + G +E A
Sbjct: 391 LSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 450
Query: 483 EMFEN 487
E+ +N
Sbjct: 451 EISKN 455
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 161/328 (49%), Gaps = 20/328 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK-----------GVISGYEIYREVFG 224
+++ ++ + + RG+S V T N+LI +SR V G+ F
Sbjct: 196 RLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFT 255
Query: 225 LDSDATAGIGK--DVKRVVRV------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+ D GK + ++++ + P++ T+N LM G G E ++ +A
Sbjct: 256 ILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADR 315
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G + + +SY++L+ +C+++++ EA +L+EEMR K ++ V YNT+IG C+ G + A
Sbjct: 316 GIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTA 375
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
++ F EM G T+ L++G C+ G ++ AI ++ + + +P +L+
Sbjct: 376 QKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDG 435
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+C ++ EA + K GL P +Y LI GLC +G + EA+K+ +M KG P
Sbjct: 436 MCRAGKLEEAWKQFD-EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLP 494
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ I +KE + A L +EM
Sbjct: 495 DSITFNVIIQNLLKENEIHEAIQLLEEM 522
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 142/321 (44%), Gaps = 31/321 (9%)
Query: 188 MSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDA-TAGI----------- 233
+ RG T L+ V G+ +++ E+ GL DA T GI
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128
Query: 234 GKDVKRVVRVRPN----VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
G +K +++ N V T+ ++ ++G + D++ EM G PD YS LM
Sbjct: 129 GLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188
Query: 290 AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
C R++EA + ++EM + + DV YN++I G G F M G
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC------DKRRV 403
+ TF L++G C+ G V A + M KG EP+ T L+ LC D ++
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
FE+ L R +K +F SY LI G C++ K++EA ++ EM KG +PS Y+
Sbjct: 309 FES---LADRGIKLNVF----SYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNT 361
Query: 464 FIDGYMKEGNVEMATMLRKEM 484
I + G V A L EM
Sbjct: 362 LIGALCQSGRVRTAQKLFVEM 382
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 2/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T L+ G + E ++ EM G D +Y +L+ C+ R+ A KL
Sbjct: 75 PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL 134
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+M+ N + DV Y II C+ G A + F EM +G+ V + L++G CR
Sbjct: 135 HEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR 193
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A+ + +M +G + T LI L + +++ + +V G P
Sbjct: 194 FGRLKEALEFFKEMEGRGISADVYTYNSLIHGL-SRAGLWKEVTWFLNLMVDRGFSPDAF 252
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI GLC+EGK+ EA ++ M KG EP + Y+ ++G G +E AT L + +
Sbjct: 253 TFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 312
Query: 485 FENQVR 490
+ ++
Sbjct: 313 ADRGIK 318
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 184/427 (43%), Gaps = 57/427 (13%)
Query: 87 LALRFFSFT-QHKSLCKHSLSSYATII-HILSRARLIGPARDVIRVALRSPENDPKLKLF 144
LAL+F + + L + L+ I H+L +ARL G A+ +++ + +N LF
Sbjct: 34 LALKFLKWVIKQPGLEPNHLTHILGITTHVLVKARLYGYAKSILKHL--AQKNSGSNFLF 91
Query: 145 EVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
VL+ TY C S P VFDLLI+ L + V+ ++ RG V TCN ++
Sbjct: 92 GVLMDTYPLCSSNPAVFDLLIRVYLRQG---MVGHAVNTFSSMLIRGFKPSVYTCNMIMA 148
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ + + ++++ RV PNV +FN L+ +G +
Sbjct: 149 SMVKNCRAHLVWSFFKQML----------------TSRVCPNVSSFNILISVLCVQGKLK 192
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
K ++ M R G P SY+ L++ C++ R + A L M K ++ DV YN I
Sbjct: 193 KAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFI 252
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
C A+ ++M + + V++ L+NG+ + G + A V+N+M
Sbjct: 253 DSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLS 312
Query: 385 PEGSTIEVLIGELCDKRRVFEAL---DILKARVVK----------FGLFPTEK------- 424
P T +LI C EAL D+++A V+ GL+ + K
Sbjct: 313 PNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNI 372
Query: 425 --------------SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
S+ +I GLC G ++EA ++ EM G P + +S I+G+ K
Sbjct: 373 LERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCK 432
Query: 471 EGNVEMA 477
GN+ A
Sbjct: 433 VGNINKA 439
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P++ TF+ L+ GF + G K ++V ++ R G P+ +S L+ C+ + EA
Sbjct: 416 VHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAM 475
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K + M D N+++ CE G++ AEEF + G+ +SVTF+ ++NGY
Sbjct: 476 KFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGY 535
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
GD A V++ M G P T L+ LC + +EA +LK ++ L
Sbjct: 536 ANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLK-KLHCIPLAVD 594
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY LI + + G + EA+++ EM+ P Y+ + G ++EG + A +
Sbjct: 595 TISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLG 654
Query: 483 EMFENQV 489
+ + ++
Sbjct: 655 RLMQKEI 661
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 1/249 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
DV VRPN T L+ G Y+ F+ ++ +C S++V++ C
Sbjct: 339 DVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRN 398
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ EA +L EM V D++ ++ +I GFC++G + +A+E ++ G ++V F
Sbjct: 399 GLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIF 458
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+ C+ G+V A+ Y M G + T L+ LC+ ++ EA + L +
Sbjct: 459 STLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLH-HIS 517
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ GL P ++ +I G G A V M+ G PS Y + + K N
Sbjct: 518 RIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFW 577
Query: 476 MATMLRKEM 484
A L K++
Sbjct: 578 EARKLLKKL 586
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 121/267 (45%), Gaps = 3/267 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
S+ G+ D + P V F+ L+ + R+G + + M G +P Y+ +
Sbjct: 87 SNFLFGVLMDTYPLCSSNPAV--FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCN 144
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++MA + R +++M V +V ++N +I C G++ +A M +
Sbjct: 145 MIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERN 204
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G + V++ L++ C+ G A+++ + M KG + + T + I LC R +
Sbjct: 205 GYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQG 264
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+LK K + P E SY LI G +EGK+ A +V EM+ P+L Y+ I+
Sbjct: 265 YLVLKKMRNKM-ITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILIN 323
Query: 467 GYMKEGNVEMATMLRKEMFENQVRQED 493
GY GN E A + M N VR +
Sbjct: 324 GYCINGNFEEALRVLDVMEANDVRPNE 350
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 127/319 (39%), Gaps = 52/319 (16%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
+G+ V T N I + R GY + +++ R + PN +
Sbjct: 239 KGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKM----------------RNKMITPNEVS 282
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N L+ GF +EG V+ EM L P+ +Y++L+ +C EA ++ + M
Sbjct: 283 YNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVME 342
Query: 310 DKNV------------------EHDV-----------------VAYNTIIGGFCEIGEMA 334
+V + DV +++ +I G C G +
Sbjct: 343 ANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLD 402
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
A + EM GV +TF L+NG+C+ G+++ A V + + R+GF P LI
Sbjct: 403 EAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLI 462
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
C V+EA+ A + G + L+ LCE GK+ EA + + G
Sbjct: 463 YNSCKVGNVYEAMKFYAAMNLN-GQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGL 521
Query: 455 EPSLEIYSAFIDGYMKEGN 473
P+ + I+GY G+
Sbjct: 522 VPNSVTFDCIINGYANVGD 540
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/383 (20%), Positives = 157/383 (40%), Gaps = 64/383 (16%)
Query: 153 ECGS--APFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
CG +PF + L+K + +N + +++ L L+V + N LI E+S+
Sbjct: 553 SCGHHPSPFTYGSLLKVLCKGQNFWEAR---KLLKKLHCIPLAVDTISYNTLIVEISKSG 609
Query: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
++ ++ E+ + + P+ +T+ ++ G REG ++ +
Sbjct: 610 NLLEAVRLFEEMIQNN----------------ILPDSYTYTCILSGLIREG---RLVCAF 650
Query: 271 VEMARLGCEPDCYSYSVLMAVFCE----ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ + RL + S++ F + + + A L++EM +K + D++A N+I G
Sbjct: 651 IFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDG 710
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
+ +G++ A + V + TF L++GY R D+ S +YN M R GF P
Sbjct: 711 YSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPN 770
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV- 445
T LI LC+ + + +LK + + + ++ LI+ CE +++ + +
Sbjct: 771 RLTYHSLILGLCNHGMLELGIKMLKMFIAESSTID-DLTFNMLIRKCCEINDLDKVIDLT 829
Query: 446 ----------------------------------QAEMVGKGFEPSLEIYSAFIDGYMKE 471
EM+ KGF P+ + Y + +
Sbjct: 830 HNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRV 889
Query: 472 GNVEMATMLRKEMFENQVRQEDG 494
G+++ A L+ +M + +D
Sbjct: 890 GDIQGAFKLKDQMVALGISLDDA 912
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 121/281 (43%), Gaps = 7/281 (2%)
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
+ GY +VF A++ I K R V PN+ TFN L+ G+ R ++
Sbjct: 707 ITDGYSRMGKVF----SASSLISK--TRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYN 760
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
M R G P+ +Y L+ C + K+ + ++ D + +N +I CEI
Sbjct: 761 LMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEIN 820
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
++ + + M + V T + + + R + + ++M +KGF P
Sbjct: 821 DLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYC 880
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
++ +C + A LK ++V G+ + + +++GL GK+EEA+ + M+
Sbjct: 881 TMMKRMCRVGDIQGAFK-LKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLR 939
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
P+ ++ + + K+ N + A L+ M +V+ +
Sbjct: 940 MKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLD 980
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
A++ G G E+ + M R+ P +++ LM VFC++ +EA L M
Sbjct: 916 AMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHY 975
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
V+ D+VAYN +I C G++ A +F+ E+ G+ + T+ LV+ V
Sbjct: 976 RVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRG 1035
Query: 372 ILVYNDMCRKGF 383
+V D+ +G
Sbjct: 1036 EIVLKDLNDRGL 1047
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/116 (20%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 237 VKRVVRVR--PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
++R++R++ P TF LM F ++ F++ ++ + M + D +Y+VL++ C
Sbjct: 934 LQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCA 993
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ A +EE++ K + ++ Y ++ ++R E +++ G+ S
Sbjct: 994 NGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVS 1049
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 146/277 (52%), Gaps = 34/277 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V +++ L+ GF G +++ + ++ EM G +PD ++SVL+ C+E ++ EA+KL
Sbjct: 270 PDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKL 329
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M + + +++ YN++I GFC +G++ A E F M G+E +++ L+NGYC+
Sbjct: 330 LEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCK 389
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFEALDI--LKARVVK 416
V A+ +YN+M + G P +T L+ G++ D +++F + + A
Sbjct: 390 TWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQI 449
Query: 417 FG-----------------LFPTEKSYMF---------LIKGLCEEGKMEEALKVQAEMV 450
+G LF KSY F LI GLC+ GK+E A ++ ++
Sbjct: 450 YGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLS 509
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+G +P + Y+ I G+ K G V+ A +L ++M EN
Sbjct: 510 QEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEEN 546
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 228/480 (47%), Gaps = 47/480 (9%)
Query: 13 VSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHH----------RSKSRWNHLL 62
+ P KP L S ST SST PS I S THH R + ++H L
Sbjct: 7 LPSPSFKPNL-SPLSTHSSTIPSS-----IPQTSS--THHPNPILPAAFNREEISFHHPL 58
Query: 63 SL----CRSG-LTPTQ-FSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILS 116
SL C++G +T Q F L ++++P + F+ L K ++ Y+ + + +
Sbjct: 59 SLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFN-RLLGGLAK--INHYSQLFSLYN 115
Query: 117 RARLIGPARDVIRVALRSPENDPKLKLFEVL--VKTYRECGSAPFV--FDLLIK-CCLEV 171
RL G + D+ +++ + ++ E L + G P V + LIK C+E
Sbjct: 116 EMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCME- 174
Query: 172 KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA 231
+I + + G + T LI + + V ++++E+ +DA+
Sbjct: 175 ---HRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEML---NDAS- 227
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+ V +P V T++ ++ G + G ++ ++++ EM G PD SYS L+
Sbjct: 228 ------QYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHG 281
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
FC + +++ L++EM D+ V+ D+V ++ +I C+ G++ A++ M G+ +
Sbjct: 282 FCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPN 341
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+T+ L++G+C GD++SA ++ M KG EP+ + LI C +V EA++ L
Sbjct: 342 LITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMN-LY 400
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+++ G P +Y L+KGL ++GK+ +A K+ M G + +IY F+DG K
Sbjct: 401 NEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKN 460
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 7/251 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + +FN L+ G + + ++ ++ EM G PD ++ S+L C R+ EA
Sbjct: 89 PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAA 148
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + +VV Y T+I G C ++ A F M G ++VT+ L+ G C+
Sbjct: 149 MAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQ 208
Query: 365 AGDVDSAILVY----NDMCRKGF--EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
G+V+ A+ ++ ND + G +P T ++I LC R EA ++ + + G
Sbjct: 209 TGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQ-G 267
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ P SY LI G C GK +++ + EMV +G +P + +S ID KEG V A
Sbjct: 268 MIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAK 327
Query: 479 MLRKEMFENQV 489
L + M + +
Sbjct: 328 KLLEVMIQRGI 338
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 36/264 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN+ T+N+L+ GF G ++++ M G EPD SY+ L+ +C+ +++EA
Sbjct: 338 IVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAM 397
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV--------- 353
L+ EM +V Y T++ G + G++ A++ F M GV ++S
Sbjct: 398 NLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGL 457
Query: 354 --------------------------TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
+ L++G C+AG +++A ++ + ++G +P+
Sbjct: 458 CKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDV 517
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T ++I C +V A +IL ++ + G P +Y L+ G CE K+EE +K+
Sbjct: 518 VTYNIMIHGFCKVGQVDNA-NILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLH 576
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKE 471
+MV K P+ + +D K+
Sbjct: 577 KMVQKDVSPNAASCTIVVDMLCKD 600
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 102/197 (51%), Gaps = 1/197 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+ L+ G +++G + ++ M G + Y + + C+ + EA +L
Sbjct: 410 PNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMEL 469
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ E++ N + ++ Y+ +I G C+ G++ A E F ++ G++ VT+ +++G+C+
Sbjct: 470 FNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCK 529
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G VD+A +++ M G P+ L+ C+ ++ E + +L ++V+ + P
Sbjct: 530 VGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLH-KMVQKDVSPNAA 588
Query: 425 SYMFLIKGLCEEGKMEE 441
S ++ LC++ K ++
Sbjct: 589 SCTIVVDMLCKDEKYKK 605
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Query: 328 CEIGEMA--RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
C+ G + +A FF M S +F L+ G + +YN+M G P
Sbjct: 65 CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+ T+ +L LC+ RV EAL + A +++ G P +Y LIKGLC E ++ EA ++
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAM-AGILRRGYIPNVVTYTTLIKGLCMEHRISEATRL 183
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
M G P+ Y I G + GNV +A L KEM +
Sbjct: 184 FLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLND 225
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 132/244 (54%), Gaps = 1/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV T+++LM G+ + + ++ M GC+PD +SY++L+ +C+ +R+ EA+
Sbjct: 363 VEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAK 422
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ EM + + D+V+YNT+I G C++G + A + F+ M +G T+ L++G+
Sbjct: 423 QLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGF 482
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G + A ++ M +P +LI +C R + EA + V+ GL P
Sbjct: 483 CKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQ-GLQPN 541
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ Y +I GLC+EG ++EAL+ M G P+ Y+ I G+++ + A L
Sbjct: 542 VQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIG 601
Query: 483 EMFE 486
EM E
Sbjct: 602 EMRE 605
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 160/319 (50%), Gaps = 23/319 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++ +DI + ++G+S + T N+LI + + +RE + ++ +
Sbjct: 277 RVNEALDIFSYMKAKGISPNIFTYNSLIQG-------LCNFSRWREASAMLNEMMS---- 325
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ + PN+ TF+ L+ F +EG + V M +G EP+ +YS LM + +
Sbjct: 326 -----LNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQ 380
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ EA KL++ M K + DV +YN +I G+C+ + A++ F EM G+ V++
Sbjct: 381 AEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSY 440
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C+ G + A ++ +M G P+ T +L+ C + + +A + +A
Sbjct: 441 NTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS 500
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ L P Y LI +C+ ++EA K+ +E+ +G +P+++IY+ I+G KEG ++
Sbjct: 501 TY-LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLD 559
Query: 476 MATMLRKEMFENQVRQEDG 494
A E F N +EDG
Sbjct: 560 EAL----EAFRNM--EEDG 572
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 154/344 (44%), Gaps = 24/344 (6%)
Query: 147 LVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
L K G +P + +LI C + +++++ ++ ++ GL + + T N LI
Sbjct: 144 LSKQMELAGLSPDTYTLHMLINCFFQ---LQRVDLGFSVLAKIIKLGLQLTIVTFNTLIN 200
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAF 263
+ + E++ ++ V R +P+VHT+ ++ G + G
Sbjct: 201 GLCKVGKFGQAVELFDDM-----------------VARGYQPDVHTYTTIINGLCKIGET 243
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
++ +M GC+PD +YS ++ C++RR+ EA ++ M+ K + ++ YN++
Sbjct: 244 VAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSL 303
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I G C A EM + + VTF L+N +C+ G+V A V M G
Sbjct: 304 IQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGV 363
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
EP T L+ + V EA + + K G P SY LI G C+ ++ EA
Sbjct: 364 EPNVVTYSSLMNGYSLQAEVVEARKLFDVMITK-GCKPDVFSYNILINGYCKAKRIGEAK 422
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++ EM+ +G P + Y+ IDG + G + A L K M N
Sbjct: 423 QLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTN 466
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 120/248 (48%), Gaps = 21/248 (8%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
KLF+V++ + C F +++LI + K I + + + ++ +GL+ + + N
Sbjct: 388 KLFDVMIT--KGCKPDVFSYNILINGYCKAKRIGEAK---QLFNEMIHQGLTPDIVSYNT 442
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
LI + + + +++++ + T G P++ T++ L+ GF ++G
Sbjct: 443 LIDGLCQLGRLREAHDLFKNML------TNG----------NLPDLCTYSILLDGFCKQG 486
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
K ++ M +P+ Y++L+ C+ R ++EA KL+ E+ + ++ +V Y
Sbjct: 487 YLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYT 546
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
TII G C+ G + A E FR M G + ++ ++ G+ + D A+ + +M K
Sbjct: 547 TIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREK 606
Query: 382 GFEPEGST 389
GF + +T
Sbjct: 607 GFVADVAT 614
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 204/460 (44%), Gaps = 35/460 (7%)
Query: 32 TPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSG---LTPTQFSQIALGLKNNPHLA 88
TPP ++H V+S + + N+ + G + P F ++ + +P +A
Sbjct: 347 TPPFSETH--FQDVISKSIREKPSNFSNYYWLSHQFGPVIVDPDLFVRVLSSFRTSPRMA 404
Query: 89 LRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
LR F + + + + S + I+ IL++ L+ A V+ + N ++ +VL+
Sbjct: 405 LRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVI----NANMHRIVDVLI 460
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+ + DLLI +E C+ + ++ LS V CN I + R
Sbjct: 461 GGCVSSEVSVKILDLLIWV---YSKKSMVEQCLSVFDKMIKSRLSPDVKNCNR-ILRILR 516
Query: 209 GKGVIS-GYEIYREV--FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEK 265
K ++S E+YR + FG ++P + T+N L+ + + G ++
Sbjct: 517 DKDLMSKAVEVYRTMGEFG------------------IKPTIVTYNTLLDSYCKGGKVQQ 558
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
D+ EM R GC P+ +Y+VL+ ++ +A+ L EM ++ YN +I
Sbjct: 559 GLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIY 618
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
G+ G +A A EM L G + T+ + G C+ G + A+ +DM P
Sbjct: 619 GYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLP 678
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+ + LI C + +A +L + LFPT +Y L+ GLC +G++E A ++
Sbjct: 679 DVVSYNTLIYGYCRLGNLMKAF-LLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQL 737
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+ EM+ +G P + Y+ ++G K G++ MA EM
Sbjct: 738 KVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 777
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 1/203 (0%)
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
+L+ V+ ++ + + ++++M + DV N I+ + M++A E +R MG
Sbjct: 475 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 534
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G++ + VT+ L++ YC+ G V + + ++M R+G P T VLI L K+ FE
Sbjct: 535 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGL-SKKGEFEQ 593
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L ++K GL + +Y LI G +G + EAL +Q EMV KG P++ Y++FI
Sbjct: 594 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIY 653
Query: 467 GYMKEGNVEMATMLRKEMFENQV 489
G K G + A +M N +
Sbjct: 654 GLCKLGRMSDAMQQLSDMLANNL 676
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 16/222 (7%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
+G S V+T N+ I+ + + G SDA + + + P+V +
Sbjct: 639 KGASPTVATYNSFIYGLCK--------------LGRMSDAMQQLSDMLAN--NLLPDVVS 682
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N L+ G+ R G K ++ E+ + P +Y+ L+ C + + A++L EM
Sbjct: 683 YNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMI 742
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
++ + D+V Y ++ G C++G ++ A+EFF EM G+E S + + G + GD
Sbjct: 743 NEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTS 802
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
A + +M KGF P+ V++ LC + EA ++L+
Sbjct: 803 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQ 844
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 102/221 (46%), Gaps = 23/221 (10%)
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
W E ++ G + + ++ + + MR A + E + + N+ H +V + +IGG C
Sbjct: 410 WAE-SQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANM-HRIV--DVLIGG-CV 464
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
E+ S + L+ Y + V+ + V++ M + P+
Sbjct: 465 SSEV-----------------SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKN 507
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
++ L DK + +A+++ + + +FG+ PT +Y L+ C+ GK+++ L + +EM
Sbjct: 508 CNRILRILRDKDLMSKAVEVYRT-MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEM 566
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+G P+ Y+ I+G K+G E A L EM + ++
Sbjct: 567 QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLK 607
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 51/193 (26%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+++ L V + N LI+ R ++ + ++ E+ R + + P
Sbjct: 671 MLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL----------------RSIYLFPT 714
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ T+N L+ G R+G E + + VEM G PD +Y++L+ C+ + A++ ++
Sbjct: 715 IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFD 774
Query: 307 EMRDKNVE-----------------------------------HDVVAYNTIIGGFCEIG 331
EM + +E D++ YN ++ G C++G
Sbjct: 775 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 834
Query: 332 EMARAEEFFREMG 344
+ A E ++ G
Sbjct: 835 NLEEASELLQKDG 847
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 139/263 (52%), Gaps = 10/263 (3%)
Query: 233 IGKDVKRVVRV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
+G ++++V+++ +PN++T+N++++ + G + E V EM G PD
Sbjct: 22 LGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTV 81
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
Y+ L+ FC+ ++ A KL++EM + + D +AY +I G C G+M A++ F +M
Sbjct: 82 VYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKM 141
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
GVE VT+ L++GYC++G+++ A ++N M + G P T L LC +V
Sbjct: 142 FSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQV 201
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
A ++L K GL +Y L+ GLC+ G + +A+K+ EM G P ++
Sbjct: 202 DTANELLHEMCGK-GLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTT 260
Query: 464 FIDGYMKEGNVEMATMLRKEMFE 486
+D Y K G + A L +EM +
Sbjct: 261 LMDAYCKTGEMVKAHELLREMLD 283
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 132/240 (55%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V +++ ++ G+ G +KV + EM G +P+ Y+Y+ ++ + C+ ++ +AE++
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM ++ + D V Y T+I GFC++G + A + F EM + + + ++ G CR
Sbjct: 68 LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A V+N M +G EP+ T LI C + +A L ++V+ GL P
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFS-LHNQMVQSGLTPNVV 186
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L GLC+ G+++ A ++ EM GKG + ++ Y++ ++G K GN+ A L +EM
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 142/268 (52%), Gaps = 12/268 (4%)
Query: 231 AGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+G D +RV+R + P+ + L+ GF + G + ++ EM + PD +
Sbjct: 58 SGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIA 117
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+ ++ C +M EA+K++ +M + VE D V Y T+I G+C+ GEM +A +M
Sbjct: 118 YTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMV 177
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
SG+ + VT+ L +G C+ G VD+A + ++MC KG + T L+ LC +
Sbjct: 178 QSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIR 237
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+A+ +++ V G++P ++ L+ C+ G+M +A ++ EM+ +G +P++ ++
Sbjct: 238 QAVKLMEEMEVA-GMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVL 296
Query: 465 IDGYMKEGNVE-----MATMLRKEMFEN 487
++G+ G +E +A ML K + N
Sbjct: 297 MNGFCMSGMLEDGERLLAWMLEKGIMPN 324
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 126/280 (45%), Gaps = 36/280 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV T+ AL G + G + ++ EM G + + +Y+ L+ C+ +R+A
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL EEM + D + + T++ +C+ GEM +A E REM G++ + +TF L+NG+
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +G ++ + M KG P +T L+ + C + + +I K + G+ P
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCAR-GVMPD 359
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE--------------------------- 455
+Y LIKG C+ M+EA + EM KGF
Sbjct: 360 SNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFE 419
Query: 456 --------PSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
EIY+ F+D EGN+E A L E EN
Sbjct: 420 EMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIEN 459
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 115/208 (55%), Gaps = 1/208 (0%)
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G PD SYS ++ +C +++ KL +EM+ K ++ ++ YN+II C+ G++ A
Sbjct: 5 GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
E REM G+ +V + L++G+C+ G++ +A ++++M ++ P+ +I
Sbjct: 65 ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC ++ EA D + ++ G+ P E +Y LI G C+ G+ME+A + +MV G P
Sbjct: 125 LCRCGKMMEA-DKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ Y+A DG K G V+ A L EM
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEM 211
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 34/179 (18%)
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G V++ ++NGYC G++ + + +M KG +P T +I LC +
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 403 VFEALDILKARV------------------VKFG----------------LFPTEKSYMF 428
V +A +L+ + K G + P +Y
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+I GLC GKM EA KV +M +G EP Y+ IDGY K G +E A L +M ++
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQS 179
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 233/546 (42%), Gaps = 98/546 (17%)
Query: 8 HIIFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS 67
H+ + S P+ +PQ +S P S + T+ +L+ SK N LLS
Sbjct: 26 HLRYFCSDPQEQPQ--------NSRPRSRNASKTAKTIANLIN---SKPFSNGLLSSLLI 74
Query: 68 GLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDV 127
++ T + L L +P ALRFF +TQ K H+ SY ++ IL R R + AR+
Sbjct: 75 TISKTTVLR-TLRLIKDPSKALRFFKWTQQKGF-SHTPESYFIMLEILGRERNLNVARNF 132
Query: 128 IRVALRSPENDPKL--KLFEVLVKTYRECG----------------SAPFV--FDLLIKC 167
+ + + KL + F L+++Y E G +P V F+ L+
Sbjct: 133 LFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSI 192
Query: 168 CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDS 227
L+ + D ML + G+S T N LI + V G+ +RE+ +
Sbjct: 193 LLKRGRTNMAKEVYD--EMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNC 250
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL--GCEPDCYSY 285
DA +V T+N L+ G R G ++ M + G P+ +Y
Sbjct: 251 DA----------------DVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTY 294
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-G 344
+ L+ +C ++ + EA + EEM + ++ +++ YNT++ G CE ++ + ++ M
Sbjct: 295 TTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKS 354
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK---- 400
G + TF +++ +C AG++D A+ V+ M + + ++ LI LC K
Sbjct: 355 DGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYD 414
Query: 401 --RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG----- 453
++F+ L + + KFG P SY + + LCE GK ++A +V +++ +G
Sbjct: 415 MAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQ 474
Query: 454 -----------------------------FEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
F P +EIY IDG++++ +L KE
Sbjct: 475 SYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDK----PLLAKET 530
Query: 485 FENQVR 490
E ++
Sbjct: 531 LEKMLK 536
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 184/402 (45%), Gaps = 29/402 (7%)
Query: 112 IHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEV 171
IH L ++ A+ +++V + +F +++T S +VF LI LE
Sbjct: 1 IHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLES 60
Query: 172 KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD----- 226
+ C + R L V TC ++ + + K + Y E+
Sbjct: 61 GFLRDAIECYXLTR---KHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASL 117
Query: 227 -----------SDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
D + + V + +RP+ ++N LM G+ R G ++ +
Sbjct: 118 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSA 177
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M G +PD Y+YSVL+ C+E +M +A++L++EM K + + V + T+I G C+ G
Sbjct: 178 MLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 237
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A E +++M + +T+ L+ G C+ GD+ A + +DM RKG +P+ T
Sbjct: 238 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTT 297
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI C + + A + K R+++ + + Y LI GLC+EG+ +A K+ EM+
Sbjct: 298 LIDGCCKEGVLVSAFEHRK-RLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSV 356
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
G P Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 357 GLNPDTGTYTMIINEFCKKGDVWKGSKLLKEM------QRDG 392
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 79/150 (52%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++ D+ +M+R G +PD +Y+ L+ C+E + A +
Sbjct: 255 PDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEH 314
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + +N+ D V Y +I G C+ G AE+ REM G+ + T+ ++N +C+
Sbjct: 315 RKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCK 374
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + +M R G P T VL+
Sbjct: 375 KGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 404
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ L + T N LI+ + + + +++ +D + G+
Sbjct: 237 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDL------IDDMSRKGL-- 288
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+P+ T+ L+ G +EG AFE + + E RL D Y+ L++
Sbjct: 289 --------KPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRL----DDVVYTALISG 336
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM + D Y II FC+ G++ + + +EM G S
Sbjct: 337 LCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 396
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 397 VVTYNVLMNG 406
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 206/459 (44%), Gaps = 51/459 (11%)
Query: 35 SDQSHNLIATVVSLLTHHRSKSRWN-----HLLSLCRSGLTPTQFSQIALGLKNNPHLAL 89
S+ H ++ V L++ +S WN +L L RS L P + L +++ +AL
Sbjct: 127 SEFRHPIVREVCRLIS---LRSNWNPKFEENLRHLLRS-LNPRLVCAV-LRSQDDERIAL 181
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSP-ENDPKLKLFEVLV 148
FF + + +H Y T++ ILS+ RL AR ++R+ R E P+ F ++
Sbjct: 182 DFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEA--FSYVM 239
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+Y G + + I+ ++ G+ +S CN I+ +
Sbjct: 240 VSYSRAGM--------------------LRNALRILTLMQKAGVEPDLSICNTAIYVL-- 277
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVED 268
+ G ++ + + L+ AGI P++ ++N L+ G+ + +
Sbjct: 278 ----VKGNKLEKALRFLERMKVAGI----------EPDIVSYNCLIKGYCDVHRIDDALE 323
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM-RDKNVEHDVVAYNTIIGGF 327
+ EM GC PD SY +MA C++R++ E ++L E M ++ N+ D V YNT+I
Sbjct: 324 LIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYAL 383
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
+ G A F RE G V + +V+ +C+ ++D A + DM KG P+
Sbjct: 384 SKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDV 443
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T +I C ++ EA +L+ ++ K G P +Y L+ GLC GK EA ++
Sbjct: 444 VTYTAIIDGFCRVGKIDEAKKMLQ-QMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMIN 502
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ P+ YSA + G +EG + A L +EM E
Sbjct: 503 VSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIE 541
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 3/245 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T++A+M G REG + D+ EM G P+ ++L+ C + + A+K
Sbjct: 511 PNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKY 570
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EE K +VV + ++I GFC+IG++ A +M LS ++T+ L + +
Sbjct: 571 LEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGK 630
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+D A + M KG +P T +I C RV + + +L+ + + P +
Sbjct: 631 KSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIAR---QPFKT 687
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y +I+ LC G EEA K+ +++ + + I+ Y+ +GN A + +M
Sbjct: 688 VYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVACQM 747
Query: 485 FENQV 489
F +
Sbjct: 748 FRRNL 752
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 110/240 (45%), Gaps = 2/240 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
F+ +MV + R G + M + G EPD + + V + ++ +A + E M
Sbjct: 234 AFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERM 293
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ +E D+V+YN +I G+C++ + A E EM G V++ ++ C+ V
Sbjct: 294 KVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKV 353
Query: 369 DSAILVYNDMCRK-GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+ + +M + P+ T LI L +AL L+ K G + Y
Sbjct: 354 EEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEK-GFHIDKVGYS 412
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++ C+ +++A + +M KG P + Y+A IDG+ + G ++ A + ++M+++
Sbjct: 413 AVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKH 472
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 130/243 (53%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN+ TFN ++ G R+G ++ +V VEM+R G PD +Y+ L+ +C+E +A
Sbjct: 49 LEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQAL 108
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EM + +VV Y ++I C+ G + RA EFF +M + G+ + T+ ++NG+
Sbjct: 109 VLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGF 168
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G +D A V N+M R GF P T LI C R+ EA+ +L+ V K G+ P
Sbjct: 169 AQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGK-GVLPD 227
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY +I G +++ A +++ EM+GK P YS+ I G ++ + A + +
Sbjct: 228 VVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQ 287
Query: 483 EMF 485
EM
Sbjct: 288 EML 290
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 113/215 (52%), Gaps = 1/215 (0%)
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+ EM R GC P+ +Y+ ++ +C+ +R EA M K +E +++ +N II G C
Sbjct: 6 FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G + E EM G VT+ LVNGYC+ G+ A++++ +M R G P T
Sbjct: 66 DGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVT 125
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
LI +C + A++ V+ GL P E++Y +I G ++G ++EA +V EM
Sbjct: 126 YTSLINSMCKAGNLNRAMEFFDQMHVR-GLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
GF PS+ Y+A I+G+ G +E A L ++M
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDM 219
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 131/255 (51%), Gaps = 16/255 (6%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+NAL+ G G E+ + +M G PD SYS +++ F + + A ++
Sbjct: 191 PSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQM 250
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM K+V D V Y+++I G CE + A + F+EM + T+ L+N YC+
Sbjct: 251 KVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCK 310
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE- 423
GD++ A+ ++++M +KGF P+ T VLI L + R EA +L ++ P+
Sbjct: 311 EGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLL-LKLFYDDSIPSAV 369
Query: 424 --------------KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
KS + L+KG C +G M+EA +V M+ K +P+ IY+ I G+
Sbjct: 370 TYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHC 429
Query: 470 KEGNVEMATMLRKEM 484
+ GNV A L KEM
Sbjct: 430 RIGNVLKAYKLYKEM 444
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 126/245 (51%), Gaps = 1/245 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+N ++ G+ + ++ M G EP+ ++++++ C + R++E ++
Sbjct: 16 PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM K D V YNT++ G+C+ G +A EM +G+ + VT+ L+N C+
Sbjct: 76 LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 135
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG+++ A+ ++ M +G P T +I + + EA +L + + G P+
Sbjct: 136 AGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN-EMTRSGFIPSIV 194
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C G+MEEA+ + +MVGKG P + YS I G+ + ++ A ++ EM
Sbjct: 195 TYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEM 254
Query: 485 FENQV 489
V
Sbjct: 255 IGKSV 259
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 98/182 (53%), Gaps = 1/182 (0%)
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ ++EM +VV YNT+I G+C++ A F R MGL G+E + +TF ++NG
Sbjct: 4 RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G + V +M RKG+ P+ T L+ C + +AL +L A +V+ GL P
Sbjct: 64 CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQAL-VLHAEMVRNGLSPN 122
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI +C+ G + A++ +M +G P+ Y+ I+G+ ++G ++ A +
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182
Query: 483 EM 484
EM
Sbjct: 183 EM 184
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 182/440 (41%), Gaps = 58/440 (13%)
Query: 64 LCRSGLTPTQFSQIAL----GLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRAR 119
+ R+GL+P + +L N + A+ FF + LC + +Y TII+ ++
Sbjct: 114 MVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNE-RTYTTIINGFAQQG 172
Query: 120 LIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIET 179
L+ A V+ RS P + + L+ + C L ++E
Sbjct: 173 LLDEAYRVLNEMTRSGF-IPSIVTYNALINGH---------------CVLG-----RMEE 211
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
+ +++ ++ +G+ V + + +I +R + + +++ E+ IGK V
Sbjct: 212 AIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEM----------IGKSV-- 259
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
P+ T+++L+ G + + D++ EM + PD ++Y+ L+ +C+E +
Sbjct: 260 ----LPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLN 315
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE--- 356
+A L +EM K D V YN +I G + A ++ S+VT+
Sbjct: 316 KALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLI 375
Query: 357 ------------HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
LV G+C G +D A V+ M K +P + V+I C V
Sbjct: 376 ENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVL 435
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+A + K +V P + + L+K L EG E +V +++ E+
Sbjct: 436 KAYKLYK-EMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVL 494
Query: 465 IDGYMKEGNVEMATMLRKEM 484
++ KEGN++M L EM
Sbjct: 495 VEINQKEGNMDMVFNLLTEM 514
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 165/332 (49%), Gaps = 27/332 (8%)
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
L+ C ++ + + V I ++ +GL + ++T NALI + GK + E+ R +
Sbjct: 444 LMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTM 503
Query: 223 F--GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
G++ D N+ T+N ++ G ++ E+ + +M R G +P
Sbjct: 504 VNKGMELD-----------------NI-TYNIMIQGCCKDSKIEEALKLRDDMIRKGFKP 545
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D Y ++ ++ +C+ +M EA L +M+ + V+ DVV+Y TII G+C+ ++ +A E+
Sbjct: 546 DAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYL 605
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
E+ G++ ++V + L+ GY R G++ AI V + M G +P T L+ +C
Sbjct: 606 NELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHA 665
Query: 401 RRVFEALDIL---KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
V EA + + ++ G+ Y +I+GLC+ GKM+EA+ EM + P+
Sbjct: 666 GLVDEAKTMFEQSRKNSIEVGVV----GYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPN 721
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
Y+ + Y K GN E A+ L EM + +
Sbjct: 722 KITYTTLMYAYCKSGNNEEASKLFDEMVSSGI 753
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 2/229 (0%)
Query: 250 FNALMVGFY-REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
FN+++ G R G E V + EM + G +P+ + C+ RR +EA +W +M
Sbjct: 409 FNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKM 468
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+K + ++ N +I G CE M A E R M G+E ++T+ ++ G C+ +
Sbjct: 469 LEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKI 528
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A+ + +DM RKGF+P+ +I CD ++ EAL +L ++ G+ P SY
Sbjct: 529 EEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIE-GVQPDVVSYGT 587
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+I G C+ +++A + E++ G +P+ IY+A I GY + GN+ A
Sbjct: 588 IIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGA 636
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 163/384 (42%), Gaps = 63/384 (16%)
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR------------- 208
DLLI C+ + VD +L SR S V TCNAL+ ++R
Sbjct: 159 DLLINTCVTSSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDE 218
Query: 209 ------------------------GKGVISGYEIYREV-------------FGLDSDATA 231
GK V G++I ++ + L DA
Sbjct: 219 MRDCKTVTPNGYSYTSMIKALCKVGK-VDDGFKILSDLIHAGLQQSAGAVPYNLLMDALC 277
Query: 232 GIGKDVKRVVRVR---------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
G+ V +R++ P++ TF L+ G R F +V + EM LG P+
Sbjct: 278 KSGR-VDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNE 336
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+ L+ C + EA +L++EM K ++ V YN I C+ GEM RAE E
Sbjct: 337 VICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEE 396
Query: 343 MGLSGVESSSVTFEHLVNGYC-RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
M +G+ S F +V G R G ++S + + ++M ++G +P + + +LC R
Sbjct: 397 MLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGR 456
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
R EA+ I ++++ GL + LI GLCE M+ A +V MV KG E Y
Sbjct: 457 RHQEAVGIW-LKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITY 515
Query: 462 SAFIDGYMKEGNVEMATMLRKEMF 485
+ I G K+ +E A LR +M
Sbjct: 516 NIMIQGCCKDSKIEEALKLRDDMI 539
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN +NAL+ G+ R G V M +G +P +Y LM C + EA+
Sbjct: 613 LKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAK 672
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++E+ R ++E VV Y +I G C+IG+M A +F EM + + +T+ L+ Y
Sbjct: 673 TMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAY 732
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C++G+ + A ++++M G P+ + L+
Sbjct: 733 CKSGNNEEASKLFDEMVSSGIVPDNVSYNTLV 764
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD-KNVEHDVVA 319
G+ D + ++ P + + L+ + K+++EMRD K V + +
Sbjct: 172 GSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYS 231
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSS--VTFEHLVNGYCRAGDVDSAILVYND 377
Y ++I C++G++ + ++ +G++ S+ V + L++ C++G VD AI +
Sbjct: 232 YTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGR 291
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
M P T +LI L R E +L+ + G+ P E LI C +G
Sbjct: 292 MEESRVAPSMVTFGILINGLKRSDRFGEVGALLR-EMEGLGITPNEVICNELIDWHCRKG 350
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
EA+++ EMV K + + Y+ KEG +E A + +EM + G
Sbjct: 351 HFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSG 407
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 84/174 (48%), Gaps = 13/174 (7%)
Query: 200 NALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK-DVKRVVRVRPNVHTFNALMVGFY 258
NA+I+ +I GY G + + + IG D + ++P T+ +LM
Sbjct: 616 NAVIY-----NALIGGY-------GRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMC 663
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
G ++ + ++ + + E Y++++ C+ +M EA +EEMR +++ + +
Sbjct: 664 HAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKI 723
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
Y T++ +C+ G A + F EM SG+ +V++ LV G+ + +D AI
Sbjct: 724 TYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAI 777
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ ++ G + G ++ + + EM P+ +Y+ LM +C+ EA KL++EM
Sbjct: 690 YTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMV 749
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+ D V+YNT++ GF ++ + +A E E+
Sbjct: 750 SSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEI 783
>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55840-like [Cucumis sativus]
Length = 1079
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 184/427 (43%), Gaps = 57/427 (13%)
Query: 87 LALRFFSFT-QHKSLCKHSLSSYATII-HILSRARLIGPARDVIRVALRSPENDPKLKLF 144
LAL+F + + L + L+ I H+L RARL G A+ +++ + +N LF
Sbjct: 34 LALKFLKWVIKQPGLEPNHLTHILGITTHVLVRARLYGYAKSILKHL--AQKNSGSNFLF 91
Query: 145 EVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
VL+ TY C S P VFDLLI+ L + V+ ++ RG V TCN ++
Sbjct: 92 GVLMDTYPLCSSNPAVFDLLIRVYLRQG---MVGHAVNTFSSMLIRGFKPSVYTCNMIMA 148
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ + + ++++ RV PNV +FN L+ +G +
Sbjct: 149 SMVKNCRAHLVWXFFKQML----------------TSRVCPNVSSFNILISVLCVQGKLK 192
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
K ++ M R G P SY+ L++ C++ R + A L M K ++ DV YN I
Sbjct: 193 KAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFI 252
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
C A+ ++M + + V++ L+NG+ + G + A V+N+M
Sbjct: 253 DSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLS 312
Query: 385 PEGSTIEVLIGELCDKRRVFEA---LDILKARVVK----------FGLFPTEK------- 424
P T +LI C EA LD+++A V+ GL+ + K
Sbjct: 313 PNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNI 372
Query: 425 --------------SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
S+ +I GLC G ++EA ++ EM G P + +S I+G+ K
Sbjct: 373 LERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCK 432
Query: 471 EGNVEMA 477
GN+ A
Sbjct: 433 VGNLNKA 439
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P++ TF+ L+ GF + G K ++V ++ R G P+ +S L+ C+ + E
Sbjct: 416 VYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGM 475
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K + M D N+++ CE G++ AEEF + G+ +SVTF+ ++NGY
Sbjct: 476 KFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGY 535
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
GD A V++ M G P T L+ LC + +EA +LK ++ L
Sbjct: 536 ANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLK-KLHCIPLAVD 594
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY LI + + G + EA+++ EM+ P Y+ + G ++EG + A +
Sbjct: 595 TISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLG 654
Query: 483 EMFENQV 489
+ + ++
Sbjct: 655 RLMQKEI 661
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 121/267 (45%), Gaps = 3/267 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
S+ G+ D + P V F+ L+ + R+G + + M G +P Y+ +
Sbjct: 87 SNFLFGVLMDTYPLCSSNPAV--FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCN 144
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++MA + R +++M V +V ++N +I C G++ +A M +
Sbjct: 145 MIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERN 204
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G + V++ L++ C+ G A+++ + M KG + + T + I LC R +
Sbjct: 205 GYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQG 264
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+LK K + P E SY LI G +EGK+ A +V EM+ P+L Y+ I+
Sbjct: 265 YLVLKKMRNKM-ITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILIN 323
Query: 467 GYMKEGNVEMATMLRKEMFENQVRQED 493
GY GN E A L M N VR +
Sbjct: 324 GYCINGNFEEALRLLDVMEANDVRPNE 350
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/383 (20%), Positives = 157/383 (40%), Gaps = 64/383 (16%)
Query: 153 ECGS--APFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
CG +PF + L+K + +N + +++ L L+V + N LI E+S+
Sbjct: 553 SCGHHPSPFTYGSLLKVLCKGQNFWEAR---KLLKKLHCIPLAVDTISYNTLIVEISKSG 609
Query: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
++ ++ E+ + + P+ +T+ ++ G REG ++ +
Sbjct: 610 NLLEAVRLFEEMIQNN----------------ILPDSYTYTCILSGLIREG---RLVCAF 650
Query: 271 VEMARLGCEPDCYSYSVLMAVFCE----ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ + RL + S++ F + + + A L++EM +K + D++A N+I G
Sbjct: 651 IFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDG 710
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
+ +G++ A + V + TF L++GY R D+ S +YN M R GF P
Sbjct: 711 YSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPN 770
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV- 445
T LI LC+ + + +LK + + + ++ LI+ CE +++ + +
Sbjct: 771 RLTYHSLILGLCNHGMLELGIKMLKMFIAESSTID-DLTFNMLIRKCCEINDLDKVIDLT 829
Query: 446 ----------------------------------QAEMVGKGFEPSLEIYSAFIDGYMKE 471
EM+ KGF P+ + Y + +
Sbjct: 830 HNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRV 889
Query: 472 GNVEMATMLRKEMFENQVRQEDG 494
G+++ A L+ +M + +D
Sbjct: 890 GDIQGAFKLKDQMVALGISLDDA 912
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 121/281 (43%), Gaps = 7/281 (2%)
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
+ GY +VF A++ I K R V PN+ TFN L+ G+ R ++
Sbjct: 707 ITDGYSRMGKVF----SASSLISK--TRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYN 760
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
M R G P+ +Y L+ C + K+ + ++ D + +N +I CEI
Sbjct: 761 LMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEIN 820
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
++ + + M + V T + + + R + + ++M +KGF P
Sbjct: 821 DLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYC 880
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
++ +C + A LK ++V G+ + + +++GL GK+EEA+ + M+
Sbjct: 881 TMMKRMCRVGDIQGAFK-LKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLR 939
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
P+ ++ + + K+ N + A L+ M +V+ +
Sbjct: 940 MKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLD 980
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
A++ G G E+ + M R+ P +++ LM VFC++ +EA L M
Sbjct: 916 AMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHY 975
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
V+ D+VAYN +I C G++ A +F+ E+ G+ + T+ LV+ V
Sbjct: 976 RVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRG 1035
Query: 372 ILVYNDMCRKGF 383
+V D+ +G
Sbjct: 1036 EIVLKDLNDRGL 1047
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/116 (20%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 237 VKRVVRVR--PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
++R++R++ P TF LM F ++ F++ ++ + M + D +Y+VL++ C
Sbjct: 934 LQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCA 993
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ A +EE++ K + ++ Y ++ ++R E +++ G+ S
Sbjct: 994 NGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVS 1049
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 172/356 (48%), Gaps = 26/356 (7%)
Query: 155 GSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
G AP F ++ +I C + +E+ T + + RGL T A I S+ +
Sbjct: 414 GVAPDIFCYNAIISCLSKAGKMEEAST---YLLEIQGRGLKPDAVTFGAFILGYSKTGKM 470
Query: 213 ISGYEIYREVFG-------------LDSDATAGIGKDVKRVVR------VRPNVHTFNAL 253
+ + E+ ++ AG + + R V P+V T +A
Sbjct: 471 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 530
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ G + G ++ V+ E+ G PD ++YS L++ FC++ + +A +L +EM K +
Sbjct: 531 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 590
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
++ YN ++ G C+ G++ RA + F M G+E SVT+ +++GYC++ +V A
Sbjct: 591 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 650
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
++++M KG +P L+ C + + +A+++ + + K F T S+ LI G
Sbjct: 651 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG--FATTLSFNTLIDGY 708
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
C+ K++EA ++ EM+ K P Y+ ID + K G +E A +L KEM E +
Sbjct: 709 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 764
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 212/489 (43%), Gaps = 50/489 (10%)
Query: 25 QFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRW--NHLLSLCRSGLTPTQFSQIALGLK 82
+FSTS+ P+ ++ N + L + K+ +H+ S + Q +G
Sbjct: 28 EFSTST---PTSETLNFSQQISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQNQVG-- 82
Query: 83 NNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLK 142
+P L FF ++Q + L S++ + L + L G A V+ +R+P + +
Sbjct: 83 -DPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSI- 140
Query: 143 LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDI------------------V 184
L VL GS+P VFD+LI K + ++ ++ +
Sbjct: 141 LDSVLFWFRNYGGSSPVVFDILID---SYKRMGMLDEAANVFFVAKNDSILISLIRCNSL 197
Query: 185 RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATA------GIGK- 235
R + +GL T + + R K + + E+ GL D A G +
Sbjct: 198 RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMRE 257
Query: 236 -DVKRVVRVRP---------NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
D+ V+R++ N+ T+N L+ G + G EK ++ M LGC+P+ ++
Sbjct: 258 GDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTF 317
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+L+ +C E M A +L +EM +N+ V+Y +I G C +++ A + +M
Sbjct: 318 CLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF 377
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
SG++ + V + L+ GY G ++ A + + M G P+ +I L ++ E
Sbjct: 378 SGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEE 437
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
A L + GL P ++ I G + GKM EA K EM+ G P+ +Y+ I
Sbjct: 438 ASTYL-LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 496
Query: 466 DGYMKEGNV 474
+G+ K GN+
Sbjct: 497 NGHFKAGNL 505
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 153/313 (48%), Gaps = 18/313 (5%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
+ I R L + G+ V TC+A I + + V +++ E+ +
Sbjct: 509 LSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL----------------KE 552
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ P+V T+++L+ GF ++G EK ++ EM G P+ + Y+ L+ C+ ++
Sbjct: 553 KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR 612
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A KL++ M +K +E D V Y+T+I G+C+ +A A F EM GV+ S + LV+
Sbjct: 613 ARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVH 672
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ GD++ A+ ++ +M +KGF S LI C ++ EA + + + K +
Sbjct: 673 GCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAK-QIM 730
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y +I C+ GKMEEA + EM + Y++ + GY K G L
Sbjct: 731 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 790
Query: 481 RKEMFENQVRQED 493
++M V+ ++
Sbjct: 791 FEKMVAKGVKPDE 803
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 132/244 (54%), Gaps = 1/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV ++ L++G+ EG E+ + M+ G PD + Y+ +++ + +M EA
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 439
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
E++ + ++ D V + I G+ + G+M A ++F EM G+ ++ + L+NG+
Sbjct: 440 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 499
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+AG++ A+ ++ + G P+ T I L RV EAL + + + + GL P
Sbjct: 500 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF-SELKEKGLVPD 558
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI G C++G++E+A ++ EM KG P++ IY+A +DG K G+++ A L
Sbjct: 559 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 618
Query: 483 EMFE 486
M E
Sbjct: 619 GMPE 622
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 122/236 (51%), Gaps = 1/236 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+FN L+ G+ + ++ ++ EM PD +Y+ ++ C+ +M EA L++EM
Sbjct: 700 SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 759
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+++N+ D V Y +++ G+ ++G+ + F +M GV+ VT+ ++ +C+ ++
Sbjct: 760 QERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNL 819
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A + +++ KG +G+ ++LI LC + + EA +L + + GL P+ +
Sbjct: 820 VEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLD-EMGELGLKPSLAACST 878
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
L++ E GKM+EA +V + G P ++G + + + E A L K++
Sbjct: 879 LVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 934
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 121/261 (46%), Gaps = 24/261 (9%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
FV++ L+ C + ++EK +++ R ++ +G + +S N LI + + ++
Sbjct: 665 FVYNALVHGCCKEGDMEK---AMNLFREMLQKGFATTLSF-NTLIDGYCKSCKIQEASQL 720
Query: 219 YREVFG-------------LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYR 259
++E+ +D AG ++ + + + + T+ +LM G+ +
Sbjct: 721 FQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNK 780
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G +V ++ +M G +PD +Y +++ C+E + EA KL +E+ K +
Sbjct: 781 LGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI 840
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
++ +I C+ ++ A + EMG G++ S LV + AG +D A V+ +
Sbjct: 841 HDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVK 900
Query: 380 RKGFEPEGST-IEVLIGELCD 399
G P+ +T I+++ G L D
Sbjct: 901 SLGLVPDTTTLIDLVNGNLND 921
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 135/261 (51%), Gaps = 4/261 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
G ++AT+ + + R V PN TF L+ G +EG + V+ M G EPD
Sbjct: 259 LGQLNEATSLFKQMIGR--NVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDA 316
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
Y+YS LM +C + +M EA+KL++ M K V YN +I G C+ + A+ E
Sbjct: 317 YTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSE 376
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M + +VT+ L+ G+C+AG A ++ +MC G P+ T +L+ LC
Sbjct: 377 MYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGH 436
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ EA +LKA + + + P Y LI+G+C GK+E A ++ + + KG +PS+ Y+
Sbjct: 437 LDEAFRLLKA-MQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYT 495
Query: 463 AFIDGYMKEG-NVEMATMLRK 482
I G +KEG + E M RK
Sbjct: 496 VMISGLLKEGLSNEACEMFRK 516
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 124/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+ ++ G + G + +M GC+PD +Y+ ++ C++RR EA
Sbjct: 174 PSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYF 233
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM D+ + +VV Y++I+ GFC +G++ A F++M V ++VTF LV+G C+
Sbjct: 234 FSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCK 293
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A V+ M G EP+ T L+ C + ++ EA + V K G P+ +
Sbjct: 294 EGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGK-GFAPSVR 352
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G C+ ++ EA + +EM + P YS + G+ + G ++A L KEM
Sbjct: 353 VYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEM 412
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 130/242 (53%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ +T++ALM G+ + ++ + ++ M G P Y++L+ C+ RR+ EA+
Sbjct: 312 VEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAK 371
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EM D+++ D V Y+T++ GFC+ G A++ F+EM G+ S+T+ L++G
Sbjct: 372 TLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGL 431
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G +D A + M EP +LI +C+ ++ A ++ VK G+ P+
Sbjct: 432 CKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVK-GIQPS 490
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I GL +EG EA ++ +MV G P+ Y+ I G+++ G+ A L +
Sbjct: 491 VVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIE 550
Query: 483 EM 484
EM
Sbjct: 551 EM 552
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 132/258 (51%), Gaps = 3/258 (1%)
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
A + +GK K + ++P TF L+ G + ++ E+ ++G P +Y+ +
Sbjct: 125 AFSALGKMFK--LGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTI 182
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ C+ A +L ++M +K + DVVAYNT+I C+ A FF EM G+
Sbjct: 183 IKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGI 242
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+ VT+ +++G+C G ++ A ++ M + P T +L+ LC + + EA
Sbjct: 243 PPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARR 302
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+ + + + G+ P +Y L+ G C + +M+EA K+ MVGKGF PS+ +Y+ I+G+
Sbjct: 303 VFEM-MTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGH 361
Query: 469 MKEGNVEMATMLRKEMFE 486
K + A L EM++
Sbjct: 362 CKSRRLNEAKTLLSEMYD 379
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 122/245 (49%), Gaps = 5/245 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV T+++++ GF G + ++ +M P+ ++++L+ C+E + EA
Sbjct: 242 IPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEAR 301
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++E M + VE D Y+ ++ G+C +M A++ F M G S + L+NG+
Sbjct: 302 RVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGH 361
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++ ++ A + ++M + P+ T L+ C R A + K + +GL P
Sbjct: 362 CKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFK-EMCSYGLLPD 420
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ GLC+ G ++EA ++ M EP + IY+ I G G +E A +
Sbjct: 421 SITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAA----R 476
Query: 483 EMFEN 487
E+F N
Sbjct: 477 ELFSN 481
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 134/298 (44%), Gaps = 10/298 (3%)
Query: 197 STCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVG 256
ST N ++ G G S Y V +DA A + + +R P V FN L+
Sbjct: 26 STTNISPSSITNG-GFCSNYNNLHSV----ADAVASFNQLLG--IRPLPPVVVFNKLLGS 78
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR--MREAEKLWEEMRDKNVE 314
++ + V + +M P+ Y+ ++L+ C R + A +M ++
Sbjct: 79 LVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQ 138
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
V + T++ G C ++ A + F E+G G S +T+ ++ G C+ G +A+ +
Sbjct: 139 PTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQL 198
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
M KG +P+ +I LC RR EA+ + +V G+ P +Y ++ G C
Sbjct: 199 LKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFF-SEMVDQGIPPNVVTYSSILHGFC 257
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
G++ EA + +M+G+ P+ ++ +DG KEG + A + + M EN V +
Sbjct: 258 NLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPD 315
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 1/222 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V +N L+ G + + + + EM PD +YS LM FC+ R + A+KL
Sbjct: 349 PSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKL 408
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++EM + D + Y+ ++ G C+ G + A + M S +E + L+ G C
Sbjct: 409 FKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCN 468
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +++A +++++ KG +P T V+I L + EA ++ + VV G P
Sbjct: 469 FGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVN-GCLPNSC 527
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+Y I+G G A+++ EMVG+GF + +D
Sbjct: 528 TYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 56/119 (47%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P++ +N L+ G G E +++ + G +P +Y+V+++ +E EA
Sbjct: 451 KIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEA 510
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+++ +M + YN I GF G+ + A EM G + S TF+ L++
Sbjct: 511 CEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 200/407 (49%), Gaps = 41/407 (10%)
Query: 106 SSYATIIHILSRARLIGPARDVIRVALRSPEN--DPKLKLFEVLVKTYRECGSAPFVFDL 163
+++ T+I+ L + A V+ VA R EN P + + +V + G DL
Sbjct: 136 TTFNTLINGLCLESKVSEA--VVLVA-RMVENGCQPNVVTYNSIVNGICKSGDTSLALDL 192
Query: 164 LIKCCLEVKNIEK-----------------IETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
L K ++ +N++ I+ + + + + ++G+ + T N+L+ +
Sbjct: 193 LRK--MDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGL 250
Query: 207 SRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
+ G ++ +++ ++ PNV TFN L+ F +EG ++
Sbjct: 251 CKAGKWNDGVQLLKDMTSR----------------KIIPNVITFNVLIDVFVKEGKLQEA 294
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+++ EM G P+ +Y+ LM +C + R+ EA + + M N D+V + ++I G
Sbjct: 295 NELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKG 354
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
+C++ + + FR++ G+ +++VT+ LV G+C++G ++ A ++ +M G P+
Sbjct: 355 YCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPD 414
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T +L+ LCD ++ +AL+I + + K + Y +I+G+C+ GK+E+A +
Sbjct: 415 VMTYGILLDGLCDNGKLEKALEIFE-DLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLF 473
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+ KG +P++ Y+ I G K+G++ A +L ++M E+ D
Sbjct: 474 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPND 520
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 7/234 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARL---GCEPDCYSYSVLMAVFCEERRMREA 301
P+ TFN L+ G E KV + V +AR+ GC+P+ +Y+ ++ C+ A
Sbjct: 133 PDTTTFNTLINGLCLE---SKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLA 189
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L +M ++NV+ DV Y+TII C G + A F+EM G++SS VT+ LV G
Sbjct: 190 LDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGG 249
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+AG + + + DM + P T VLI + ++ EA ++ K + K G+ P
Sbjct: 250 LCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITK-GISP 308
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+Y L+ G C + ++ EA + MV P + +++ I GY K V+
Sbjct: 309 NTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVD 362
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 80/149 (53%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T++ L+ GF + G E E+++ EM LG PD +Y +L+ C+ ++ +A +++
Sbjct: 379 NTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIF 438
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E+++ + D+V Y II G C+ G++ A F + GV+ + +T+ +++G C+
Sbjct: 439 EDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 498
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
G + A ++ M G EP T LI
Sbjct: 499 GSLSEANILLRKMEEDGNEPNDCTYNTLI 527
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 1/185 (0%)
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A L++EM +V ++ G + +F ++M L+G+ + T ++
Sbjct: 48 DAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMI 107
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
N +CR A V + + G+EP+ +T LI LC + +V EA+ +L AR+V+ G
Sbjct: 108 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAV-VLVARMVENGC 166
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y ++ G+C+ G AL + +M + + + YS ID ++G ++ A
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226
Query: 480 LRKEM 484
L KEM
Sbjct: 227 LFKEM 231
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 7/225 (3%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
D++ EM R P +S + ++ ++M + H++ N +I F
Sbjct: 51 DLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCF 110
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C + A ++ G E + TF L+NG C V A+++ M G +P
Sbjct: 111 CRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNV 170
Query: 388 STIEVLIGELCDKRRVFEALDILKA---RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
T ++ +C ALD+L+ R VK +F +Y +I LC +G ++ A+
Sbjct: 171 VTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVF----TYSTIIDSLCRDGCIDAAIS 226
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ EM KG + SL Y++ + G K G L K+M ++
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKI 271
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 117/256 (45%), Gaps = 21/256 (8%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
+ +++V+ C F LIK +VK +++ + + R + RGL T +
Sbjct: 331 NMLDLMVRN--NCSPDIVTFTSLIKGYCKVK---RVDEGMKLFRKISKRGLVANTVTYSI 385
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
L+ + + E+++E+ L V P+V T+ L+ G G
Sbjct: 386 LVQGFCQSGKLEIAEELFQEMVSLG----------------VLPDVMTYGILLDGLCDNG 429
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
EK +++ ++ + D Y++++ C+ ++ +A L+ + K V+ +V+ Y
Sbjct: 430 KLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 489
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
+I G C+ G ++ A R+M G E + T+ L+ + R GD+ ++ + +M
Sbjct: 490 VMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC 549
Query: 382 GFEPEGSTIEVLIGEL 397
GF + S+I+++I L
Sbjct: 550 GFSADASSIKMVIDML 565
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK----GFEPEGSTIE 391
A + F+EM S S V F +G + + D C+K G T+
Sbjct: 49 AIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVL----DFCKKMELNGIAHNIYTLN 104
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
++I C + A +L +V+K G P ++ LI GLC E K+ EA+ + A MV
Sbjct: 105 IMINCFCRCCKTCFAYSVL-GKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVE 163
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
G +P++ Y++ ++G K G+ +A L ++M E V+ +
Sbjct: 164 NGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKAD 204
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 196/447 (43%), Gaps = 46/447 (10%)
Query: 66 RSGLTPTQFSQIALGL----KNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLI 121
++GL+P F+ +L L N+ + A + F+ +K C+ + SY TIIH L A I
Sbjct: 242 QAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG-CRRNEVSYTTIIHGLCEAGRI 300
Query: 122 GPARDVIRVALRSPENDPKLKLFEVLVKTY------------------RECGSAPFVFDL 163
+ + +R + P ++ + V++ R C + +
Sbjct: 301 DEGISLFK-KMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTV 359
Query: 164 LIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
++ C E K++ I+ +M +GL V T NALI RG E E+
Sbjct: 360 MVDAMCKE----RKLDESRRILNEMMEKGLVPSVVTYNALI----RGYCEEGRIEAALEI 411
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
GL RPN T+N L+ GF + K + +M P
Sbjct: 412 LGLMESNNC------------RPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSL 459
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+Y+ L+ V C+ A KL + +++ + D Y+ I C+ M A + F
Sbjct: 460 VTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNS 519
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
+ G++++ V + L++G+C+AG +D AI + M + P ST LI +C + +
Sbjct: 520 LKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGK 579
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
V E L +++ + K G+ PT +Y LI+ + EG + A +V +MV G +P + Y+
Sbjct: 580 VQEGLSMVE-NMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYT 638
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQV 489
AFI Y GNV+ A + M E V
Sbjct: 639 AFIHTYCTSGNVKEAEGMMARMIEAGV 665
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 130/520 (25%), Positives = 217/520 (41%), Gaps = 83/520 (15%)
Query: 33 PPSD-QSHNLIATVVSLLTHHRSKSRWNHLLSLCR--SGLTPTQFSQIALGLKN-NPHLA 88
PP D SH+ + S+L+H +W S + L+P+ S + + NP++A
Sbjct: 51 PPDDLSSHHFL----SILSH----PKWQRHPSFQKLIPNLSPSHVSSLFNNHPDLNPNIA 102
Query: 89 LRFF-SFTQHKSLCKHSLSSYATIIHILSRARLIGPAR-------------DVIRVAL-- 132
L+FF S K KH++ S++ ++ IL L G D IR L
Sbjct: 103 LQFFNSLPLIKPGFKHTVKSHSFLLKILIPNNLFGVGEKIRISMIKACVSVDDIRFLLDF 162
Query: 133 ----RSPENDPKLKLFEVLVKTYRECG---SAPFVFDLLIKCCLE------VKNIEKIET 179
+ND K KL V++Y E + + D + + E V NI + T
Sbjct: 163 LRQMNRDDNDIKFKLS---VRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNT 219
Query: 180 CVD-------------IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE----- 221
V+ V + GLS T +LI R V S Y+++
Sbjct: 220 MVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG 279
Query: 222 -----------VFGLDSDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFEKVE 267
+ GL G + + +R P V T+ ++ + +
Sbjct: 280 CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGM 339
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
D++ EM CEP+ ++Y+V++ C+ER++ E+ ++ EM +K + VV YN +I G+
Sbjct: 340 DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGY 399
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
CE G + A E M + + T+ L+ G+ + V A+ + + M P
Sbjct: 400 CEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSL 459
Query: 388 STIEVLIGELCDK---RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
T LI C ++ LD+LK GL P + +Y I LC+ +MEEA
Sbjct: 460 VTYNSLIHVQCKAGHFDSAYKLLDLLKEN----GLVPDQWTYSVFIDTLCKSKRMEEACD 515
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ + KG + + +Y+A IDG+ K G ++ A L + M
Sbjct: 516 LFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERM 555
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 121/253 (47%), Gaps = 1/253 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
++ + +V ++N L++ R ++++ V+ EM P+ Y+ + ++ + + + E
Sbjct: 173 IKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVE 232
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A ++ + D Y ++I G+C ++ A + F M G + V++ +++
Sbjct: 233 ANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIH 292
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C AG +D I ++ M P T V+I L R E +D+ + +
Sbjct: 293 GLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFN-EMRERSCE 351
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y ++ +C+E K++E+ ++ EM+ KG PS+ Y+A I GY +EG +E A +
Sbjct: 352 PNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEI 411
Query: 481 RKEMFENQVRQED 493
M N R +
Sbjct: 412 LGLMESNNCRPNE 424
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N+L+ G +EG ++ + M+++G +P +Y++L+ E A ++
Sbjct: 562 PNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRV 621
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M + DV Y I +C G + AE M +GV S+T+ L++ Y R
Sbjct: 622 FNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYER 681
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
G A V M G +P LI
Sbjct: 682 LGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 16/184 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
KI+ + ++ + S ST N+LI+ V + V G + + + +G
Sbjct: 544 KIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENM--------SKMG- 594
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
V+P V T+ L+ REG F+ V+ +M G +PD Y+Y+ + +C
Sbjct: 595 -------VKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTS 647
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
++EAE + M + V D + Y +I + +G A + M +G + S +
Sbjct: 648 GNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIW 707
Query: 356 EHLV 359
+L+
Sbjct: 708 NNLI 711
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 183/383 (47%), Gaps = 42/383 (10%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPEN--DPKLKLFEVLVKTYRECGSAPFVFDLL 164
SY T+IH L + +G R + + R N P + ++ ++ +
Sbjct: 192 SYGTLIHGLCK---VGETRAALDLLQRVDGNLVQPNVVMYNTIIDS-------------- 234
Query: 165 IKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG 224
+ ++ + D+ ++S+G+S V T +ALI SG+ I G
Sbjct: 235 ------MCKVKLVNEAFDLFSEMVSKGISPDVVTYSALI----------SGFCI----LG 274
Query: 225 LDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
DA K + + ++P+V+TFN L+ F ++G ++ + V+ M + G +P+ +
Sbjct: 275 KLKDAIDLFNKMI--LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVT 332
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+ LM +C + + +A+ ++ M V D+ +Y+ +I GFC+I + A F+EM
Sbjct: 333 YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMH 392
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
+ VT+ L++G ++G + A+ + + M +G P T ++ LC +V
Sbjct: 393 RKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVD 452
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+A+ +L K G P +Y LIKGLC+ GK+E+A KV +++ KG+ + Y+
Sbjct: 453 KAIALLTKFKDK-GFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIM 511
Query: 465 IDGYMKEGNVEMATMLRKEMFEN 487
I G+ EG A L +M +N
Sbjct: 512 IQGFCVEGLFNEALALLSKMEDN 534
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 176/364 (48%), Gaps = 21/364 (5%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM-LMSRGLSVKVS 197
P L +L+ + + G PF F + K I K+ D + +S+GL +K
Sbjct: 118 PNLVNCNILINCFCQLGLIPFAFSVFAK-------ILKMGYVPDTITFTTLSKGLCLKGQ 170
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD------VKRV--VRVRPNVHT 249
A ++ K V G+ + +G +G+ ++RV V+PNV
Sbjct: 171 IQQAFLF---HDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVM 227
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N ++ + + D++ EM G PD +YS L++ FC ++++A L+ +M
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+N++ DV +N ++ FC+ G+M + F M G++ + VT+ L++GYC +V+
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A ++N M + G P+ + ++I C ++ EA+++ K K + P +Y L
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRK-NIIPDVVTYSSL 406
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I GL + G++ AL++ +M +G P++ Y++ +D K V+ A L + F+++
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTK-FKDKG 465
Query: 490 RQED 493
Q D
Sbjct: 466 FQPD 469
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 124/250 (49%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN+ N L+ F + G V+ ++ ++G PD +++ L C + ++++A
Sbjct: 116 IKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAF 175
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ D ++Y T+I G C++GE A + + + + V+ + V + +++
Sbjct: 176 LFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSM 235
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ V+ A ++++M KG P+ T LI C ++ +A+D+ +++ + P
Sbjct: 236 CKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILE-NIKPD 294
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ L+ C++GKM+E V M+ +G +P+ Y++ +DGY V A +
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFN 354
Query: 483 EMFENQVRQE 492
M + V +
Sbjct: 355 TMAQGGVNPD 364
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 110/247 (44%), Gaps = 1/247 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N ++++ F+ + ++ + R P + ++ ++ + + L
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++M + ++ ++V N +I FC++G + A F ++ G ++TF L G C
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + A L ++ + GF + + LI LC ALD+L+ RV + P
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQ-RVDGNLVQPNVVM 227
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I +C+ + EA + +EMV KG P + YSA I G+ G ++ A L +M
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287
Query: 486 ENQVRQE 492
++ +
Sbjct: 288 LENIKPD 294
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN+ T+N+++ + +K + + G +PD +YS+L+ C+ ++ +A
Sbjct: 431 VPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDAR 490
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++E++ K DV AY +I GFC G A +M +G + T+E ++
Sbjct: 491 KVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSL 550
Query: 363 CRAGDVDSAILVYNDMCRKG 382
+ + D A + +M +G
Sbjct: 551 FKKDENDMAEKLLREMIARG 570
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P++ T++ L+ G + G E V+ ++ G D Y+Y++++ FC E EA
Sbjct: 467 QPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALA 526
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
L +M D D Y II + E AE+ REM G+
Sbjct: 527 LLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 135/250 (54%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV+T+N L+ G ++ V +M GC+P+ +Y+ L+A FC + AE
Sbjct: 153 VAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAE 212
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L + MR+ ++ ++V +N+++ G C+ G M A + F EM G+ V++ LV GY
Sbjct: 213 RLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGY 272
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G A+ V+ +M RKG P+ T LI +C + A+ +++ + + GL
Sbjct: 273 CKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVR-EMRERGLQMN 331
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E ++ LI G C++G +++AL EM +PS+ Y+A I+GY G ++ A L +
Sbjct: 332 EITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVR 391
Query: 483 EMFENQVRQE 492
EM V+ +
Sbjct: 392 EMEAKGVKPD 401
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 164/354 (46%), Gaps = 23/354 (6%)
Query: 154 CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVI 213
C ++ L+ +++ E VD++R GL + T N+++ + + +
Sbjct: 188 CDPNAVTYNTLVAAFCRAGEVDRAERLVDMMR---EGGLKPNLVTFNSVVNGICKAGRME 244
Query: 214 SGYEIYREVF--GLDSDATA-----------GIGKDVKRVVR------VRPNVHTFNALM 254
+++ E+ GL D + G + V + P+V TF +L+
Sbjct: 245 DARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLI 304
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
+ G E+ + EM G + + +++ L+ FC++ + +A EMR ++
Sbjct: 305 HVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQ 364
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
VV YN +I G+C +G M A E REM GV+ VT+ +++ YC+ GD SA +
Sbjct: 365 PSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQL 424
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
M G P+ T LI LC+++R+ +A +L ++ GL P E +Y LI G C
Sbjct: 425 NQQMLENGVLPDAITYSSLIRVLCEEKRLGDA-HVLFKNMISLGLQPDEVTYTSLIDGHC 483
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+EG +E AL + EMV G P + YS I+G K + A L +++ +
Sbjct: 484 KEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEE 537
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 131/245 (53%), Gaps = 1/245 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N L+ F R G ++ E + M G +P+ +++ ++ C+ RM +A K+
Sbjct: 190 PNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKV 249
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++EM + + D V+YNT++GG+C++G A F EM G+ VTF L++ C+
Sbjct: 250 FDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCK 309
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG+++ A+ + +M +G + T LI C K + +AL ++ + + + P+
Sbjct: 310 AGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR-EMRQCRIQPSVV 368
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G C G+M+EA ++ EM KG +P + YS + Y K G+ A L ++M
Sbjct: 369 CYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQM 428
Query: 485 FENQV 489
EN V
Sbjct: 429 LENGV 433
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 132/246 (53%), Gaps = 2/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V +NA+++ + + + M G P+ Y+Y++L+ C +EA +
Sbjct: 121 PSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+MR + + V YNT++ FC GE+ RAE M G++ + VTF +VNG C+
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG ++ A V+++M ++G P+G + L+G C EAL + A + + G+ P
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVF-AEMTRKGIMPDVV 298
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI +C+ G +E A+ + EM +G + + ++A IDG+ K+G ++ A + +EM
Sbjct: 299 TFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREM 358
Query: 485 FENQVR 490
+ +++
Sbjct: 359 RQCRIQ 364
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 153/331 (46%), Gaps = 42/331 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+E V +VR + RGL + T ALI + + RE+
Sbjct: 312 NLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREM------------- 358
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R R++P+V +NAL+ G+ G ++ ++ EM G +PD +YS +++ +C+
Sbjct: 359 ---RQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKN 415
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
A +L ++M + V D + Y+++I CE + A F+ M G++ VT+
Sbjct: 416 GDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTY 475
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G+C+ G+V+ A+ ++++M + G P+ T VLI L R EA +L
Sbjct: 476 TSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLL----- 530
Query: 416 KFGLFPTE--------------------KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
F L+ E KS + L+KG C +G M EA KV ++ + +
Sbjct: 531 -FKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWN 589
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+YS I G+ +EGNV A K+M +
Sbjct: 590 LDGSVYSVLIHGHCREGNVMKALSFHKQMLQ 620
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 122/283 (43%), Gaps = 51/283 (18%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+V T++ ++ + + G + +M G PD +YS L+ V CEE+R+ +A
Sbjct: 398 VKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAH 457
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++ M ++ D V Y ++I G C+ G + RA EM +GV VT+ L+NG
Sbjct: 458 VLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGL 517
Query: 363 ----------------------------------CRAGDVDSAILVYNDMCRKGFEPE-- 386
CR ++ S + + C KG E
Sbjct: 518 SKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEAD 577
Query: 387 --------------GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
GS VLI C + V +AL K ++++ G P S + LI+G
Sbjct: 578 KVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHK-QMLQCGFAPNSTSTISLIRG 636
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
L E+G + EA +V +++ E A ID +KEGNV+
Sbjct: 637 LFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVD 679
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 87/232 (37%), Gaps = 51/232 (21%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL-------------- 288
++P+ T+ +L+ G +EG E+ + EM + G PD +YSVL
Sbjct: 468 LQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQ 527
Query: 289 ------------------------------------MAVFCEERRMREAEKLWEEMRDKN 312
+ FC + M EA+K+++ + D+N
Sbjct: 528 RLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRN 587
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
D Y+ +I G C G + +A F ++M G +S + L+ G G V A
Sbjct: 588 WNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEAD 647
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
V + + + LI + V LD+L + + GL P+ +
Sbjct: 648 QVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHG-MARDGLLPSPR 698
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 215/494 (43%), Gaps = 105/494 (21%)
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVK 149
FF ++ K L SY+ + L + LI A +++ L++ + P L++ + LV+
Sbjct: 105 NFFHWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRK--PPLEILDSLVR 162
Query: 150 TYRECGSAPF-VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
YRE G + VFD+ I + + + + + +S G + CN L+ ++ +
Sbjct: 163 CYREFGGSNLTVFDIFID---KFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLK 219
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRV------------------------R 244
+ ++ +V+G S A I DV V +
Sbjct: 220 ANMM----GLFWKVYG--SMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECK 273
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+NA + G + GA ++ +V M G PD ++Y++L+ FC+++R +EA+ +
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333
Query: 305 WEEM--------------------RDKNVEH---------------DVVAYNTIIGGFCE 329
+E M ++ N+E +VV YN +IGG +
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
GEMA+A F EM ++G+E + T+ L++GY ++ D+ A + +M + P T
Sbjct: 394 AGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT 453
Query: 390 IEVLIGELC---DKRRVFEALD----------------ILKARV---------------V 415
VLI LC D ++ E LD ++KA V +
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMI 513
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G+ P Y LI GLC K+EEA + +M KG +P+ Y AFI+ Y K G ++
Sbjct: 514 ANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQ 573
Query: 476 MATMLRKEMFENQV 489
+A K+M + +
Sbjct: 574 VAERYFKDMLSSGI 587
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 166/351 (47%), Gaps = 23/351 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
F + LI ++ NIE+ + I +++RGL + V T NA+I +++ + +
Sbjct: 347 FTYTALIDGFIKEGNIEE---ALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSL 403
Query: 219 YREVF--GLDSDA------------TAGIGKDVKRVVRVR-----PNVHTFNALMVGFYR 259
+ E+ G++ D + + K + + ++ P+ T++ L+ G
Sbjct: 404 FNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCH 463
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
+K +V +M R G +P+ + Y L+ + +E R A +L + M V D+
Sbjct: 464 SSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFC 523
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YN +I G C ++ A+ +MG G++ ++ T+ +N Y ++G++ A + DM
Sbjct: 524 YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML 583
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
G P +LI CD EAL K + K GL P ++Y +I L + GK
Sbjct: 584 SSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEK-GLIPDIRAYSAIIHSLSKNGKT 642
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+EA+ V + + G P + +Y++ I G+ KEG++E A+ L EM N +
Sbjct: 643 KEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGIN 693
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 127/252 (50%), Gaps = 3/252 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+PNV + L+ + +E +E ++ M G PD + Y+ L+ C +++ EA+
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAK 541
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +M +K ++ + Y I + + GE+ AE +F++M SG+ ++V + L+ G+
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGH 601
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G+ A+ + M KG P+ +I L + EA+ + + +K G+ P
Sbjct: 602 CDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF-LKFLKTGVVPD 660
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID--GYMKEGNVEMATML 480
Y LI G C+EG +E+A ++ EM+ G P++ +Y+ I+ GY K GN+ A L
Sbjct: 661 VFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKL 720
Query: 481 RKEMFENQVRQE 492
EM + +
Sbjct: 721 FDEMISKGISPD 732
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 168/380 (44%), Gaps = 63/380 (16%)
Query: 145 EVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
EVL + R G P F++ LIK ++ + E +++++++++ G+ + N L
Sbjct: 472 EVLDQMIRN-GVKPNVFMYGTLIKAYVQE---SRYEMAIELLKIMIANGVLPDLFCYNCL 527
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
I + R K V + ++ GI +PN HT+ A + + + G
Sbjct: 528 IIGLCRAKKVEEAKMLLVDM------GEKGI----------KPNAHTYGAFINLYSKSGE 571
Query: 263 FEKVEDVWVEMARLG---------------CE--------------------PDCYSYSV 287
+ E + +M G C+ PD +YS
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSA 631
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
++ + + +EA ++ + V DV YN++I GFC+ G++ +A + + EM +G
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691
Query: 348 VESSSVTFEHLVN--GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
+ + V + L+N GYC++G++ A ++++M KG P+G +LI + + +
Sbjct: 692 INPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEK 751
Query: 406 ALDIL-KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
AL + +A+ G S LI C+ GK+ EA ++ +MV K P++ Y+
Sbjct: 752 ALSLFHEAQQKSVGSLSAFNS---LIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTIL 808
Query: 465 IDGYMKEGNVEMATMLRKEM 484
ID Y K +E A L +M
Sbjct: 809 IDAYGKAEMMEEAEQLFLDM 828
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 115/254 (45%), Gaps = 5/254 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF--CEERRMRE 300
V P+V +N+L+ GF +EG EK ++ EM G P+ Y+ L+ + C+ + E
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTE 716
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A KL++EM K + D Y +I G + G + +A F E V S S F L++
Sbjct: 717 AFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLID 775
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
+C+ G V A +++DM K P T +LI + K + E + L + +
Sbjct: 776 SFCKHGKVIEARELFDDMVDKKLTPNIVTYTILI-DAYGKAEMMEEAEQLFLDMETRNII 834
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG-NVEMATM 479
P +Y L+ + G + + + +M +G Y Y KEG ++E +
Sbjct: 835 PNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKL 894
Query: 480 LRKEMFENQVRQED 493
L K + E ++D
Sbjct: 895 LNKSLVEGIKLEDD 908
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 170/375 (45%), Gaps = 46/375 (12%)
Query: 105 LSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFD 162
+ +Y+ IIH LS+ G ++ + V L+ + + G P F+++
Sbjct: 626 IRAYSAIIHSLSKN---GKTKEAMGVFLK-----------------FLKTGVVPDVFLYN 665
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI--WEVSRGKGVISGYEIYR 220
LI + +IEK D ++ G++ + N LI + + + ++++
Sbjct: 666 SLISGFCKEGDIEKASQLYD---EMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFD 722
Query: 221 EVF--GLDSDA------TAGIGK--DVKRVV--------RVRPNVHTFNALMVGFYREGA 262
E+ G+ D G GK ++++ + + ++ FN+L+ F + G
Sbjct: 723 EMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGK 782
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
+ +++ +M P+ +Y++L+ + + M EAE+L+ +M +N+ + + Y +
Sbjct: 783 VIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTS 842
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
++ + +IG + F++M G+ ++ + + + YC+ G A+ + N +G
Sbjct: 843 LLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEG 902
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+ E + LI LC ++++ L++L + + K L + K+ L+ G + G +EA
Sbjct: 903 IKLEDDVFDALIFHLCKEKQISTVLELL-SEMGKEELSLSSKTCNTLLLGFYKSGNEDEA 961
Query: 443 LKVQAEMVGKGFEPS 457
KV M G+ P+
Sbjct: 962 SKVLGVMQRLGWVPT 976
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 124/246 (50%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV ++ ++ G+ +G + D++ M G PD Y+++VL+ + + +A +
Sbjct: 357 PNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMII 416
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EMRD V+ DVV Y T+I C IG+M A E F +M GV + L+ G+C
Sbjct: 417 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT 476
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A + +++ G + +I LC RV +A +I V GL PT
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL-TVNVGLHPTAV 535
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y L+ G C GKME+AL+V MV G EP+ +Y ++GY K G ++ L +EM
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595
Query: 485 FENQVR 490
+ ++
Sbjct: 596 LQKGIK 601
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+++TFN L+ + G +K ++ EM G +PD +Y ++A C +M +A
Sbjct: 390 IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 449
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + +M D+ V D AY+ +I GFC G + +A+E E+ +G+ V F ++N
Sbjct: 450 EKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G V A +++ G P +L+ C ++ +AL + A +V G+ P
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA-MVSAGIEPN 568
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ Y L+ G C+ G+++E L + EM+ KG +PS +Y+ IDG + G A +
Sbjct: 569 DVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 628
Query: 483 EMFENQV 489
EM E+ +
Sbjct: 629 EMTESGI 635
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 127/250 (50%), Gaps = 3/250 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG--CEPDCYSYSVLMAVFCEERRMREAE 302
P+V +++ L+ +G + +D+ MA G C PD +YS ++ F +E + +A
Sbjct: 180 PDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKAC 239
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++EM + + D V Y++++ C+ M +AE F R+M GV ++ T+ +L+ GY
Sbjct: 240 DLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGY 299
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G A+ V+ +M R P+ T+ +L+G LC ++ EA D+ +K G P
Sbjct: 300 SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK-GQNPN 358
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY ++ G +G + + + M+G G P + ++ I Y G ++ A ++
Sbjct: 359 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFN 418
Query: 483 EMFENQVRQE 492
EM ++ V+ +
Sbjct: 419 EMRDHGVKPD 428
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 137/309 (44%), Gaps = 17/309 (5%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
D+ +++ G++ + T N LI + + I+ E+ R
Sbjct: 380 DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM----------------RDH 423
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
V+P+V T+ ++ R G + + + +M G PD Y+Y L+ FC + +A
Sbjct: 424 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA 483
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++L E+ + + D+V +++II C++G + A+ F G+ ++V + L++G
Sbjct: 484 KELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDG 543
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC G ++ A+ V++ M G EP L+ C R+ E L + + + K G+ P
Sbjct: 544 YCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQK-GIKP 602
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ Y +I GL E G+ A EM G + Y+ + G K + A L
Sbjct: 603 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLF 662
Query: 482 KEMFENQVR 490
KE+ V+
Sbjct: 663 KELRAMNVK 671
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 132/291 (45%), Gaps = 11/291 (3%)
Query: 210 KGVISGYEIYRE-VFGLDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGA 262
KGV+ Y ++G S G K+ RV + + P+V T + LM + G
Sbjct: 283 KGVLPNNWTYNNLIYGYSS---TGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK 339
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
++ DV+ MA G P+ +SY++++ + + + + L++ M + D+ +N
Sbjct: 340 IKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNV 399
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I + G + +A F EM GV+ VT+ ++ CR G +D A+ +N M +G
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 459
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
P+ LI C + +A +++ + ++ G+ + +I LC+ G++ +A
Sbjct: 460 VAPDKYAYHCLIQGFCTHGSLLKAKELI-SEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 518
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+ V G P+ +YS +DGY G +E A + M + D
Sbjct: 519 QNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPND 569
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 36/278 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM------ 298
P+V ++ ++ GF++EG K D++ EM + G PD +YS ++ C+ R M
Sbjct: 217 PDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAF 276
Query: 299 -----------------------------REAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+EA ++++EMR ++ DVV + ++G C+
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G++ A + F M + G + ++ ++NGY G + +++ M G P+ T
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 396
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
VLI + + +A+ I + G+ P +Y +I LC GKM++A++ +M
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFN-EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ +G P Y I G+ G++ A L E+ N
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN 493
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 132/293 (45%), Gaps = 17/293 (5%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
+++ +M+ G+ + + +++I + + V+ I+ D T +G
Sbjct: 485 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF--------DLTVNVG------- 529
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ P ++ LM G+ G EK V+ M G EP+ Y L+ +C+ R+ E
Sbjct: 530 -LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L+ EM K ++ + YN II G E G A+ F EM SG+ + T+ ++ G
Sbjct: 589 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRG 648
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ D AI ++ ++ + T+ +I + RRV EA D+ A + + GL P
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLF-ASISRSGLVP 707
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+Y +I L +EG +EEA + + M G EP + + + +K+ +
Sbjct: 708 CVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 760
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
R + V+ N+ T N ++ G ++ E+ +D++ ++R G P +YS+++ +E +
Sbjct: 666 RAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLV 725
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EAE ++ M++ E D N ++ + E+ RA + LS ++ + + EHL
Sbjct: 726 EEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAY-----LSKIDERNFSLEHL 780
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 75/168 (44%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+N ++ G ++ F++ ++ E+ + + + + + ++A + RR+ EA+ L+
Sbjct: 638 NKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLF 697
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ + VV Y+ +I + G + AE+ F M +G E S H+V +
Sbjct: 698 ASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKK 757
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
++ A + + + F E T +L+ K E + L A+
Sbjct: 758 NEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFLPAK 805
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 145/275 (52%), Gaps = 9/275 (3%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + +++ ++ PN+ TFNAL+ F +EG F + E + +M + +PD
Sbjct: 233 YGRWSDASQLLSDMIEK--KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDI 290
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
++Y+ L+ FC R+ +A++++E M K+ D+ YNT+I GFC+ + E FRE
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 350
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK-- 400
M G+ +VT+ L+ G GD D+A V+ M G P+ T +L+ LC+
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 401 -RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+ E D ++ +K ++ Y +I+G+C+ GK+++ + + KG +P++
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYI----YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
Y+ I G + ++ A L K+M E+ + G
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 128/262 (48%), Gaps = 2/262 (0%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
D +G+ ++R+ + N++T+N L+ F R + +M +LG EP + S
Sbjct: 27 DLVISLGEKMQRL-GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 85
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ +C +R+ +A L ++M + D + + T+I G + + A M G
Sbjct: 86 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ + VT+ +VNG C+ GD+D A + N M E + +I LC R V +AL
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++ K K G+ P +Y LI LC G+ +A ++ ++M+ K P+L ++A ID
Sbjct: 206 NLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 468 YMKEGNVEMATMLRKEMFENQV 489
++KEG A L +M + +
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSI 286
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 123/272 (45%), Gaps = 24/272 (8%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAG 232
++++ + ++S+ + T N LI + K V G E++RE+ GL D
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV-- 361
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
T+ L+ G + +G + + V+ +M G PD +YS+L+
Sbjct: 362 ----------------TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C ++ +A ++++ M+ ++ D+ Y T+I G C+ G++ + F + L GV+ +
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI-GELCDKRRVFEALDILK 411
VT+ +++G C + A + M G P+ T LI L D + A I +
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 525
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
R + F + S + L+ + +G+++++
Sbjct: 526 MRSCR---FVGDASTIGLVANMLHDGRLDKSF 554
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%)
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
K + F+ + L ++ + G+ +Y LI C ++ AL + +M+ G+EPS+
Sbjct: 22 KMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIV 81
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
S+ ++GY + A L +M E R +
Sbjct: 82 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 114
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 189/410 (46%), Gaps = 29/410 (7%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
+L SY T+IH L +++ A+ +I+ + +F +++T S VF
Sbjct: 1 TLHSYCTMIHFLCTHQMLSEAKSLIQFVVSRKGKGSASAVFAAILETKGTQRSDIXVFSG 60
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
LI LE + C + R V TC ++ + + K + Y+E+
Sbjct: 61 LITAYLESGFLRDAIECYRLTR---EHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYQEIL 117
Query: 224 GLDSDAT----------------AGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFE 264
A+ + + V + +RP+V ++N LM G+ R G +
Sbjct: 118 ECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLD 177
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ + M G +PD Y+YSVL+ C+E +M EA +L++EM + V + T+I
Sbjct: 178 EGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLI 237
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G C+ G + A E +++M + +T+ L+ G C+ GB+ A ++ +M KG +
Sbjct: 238 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXK 297
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P+ T LI C + + A + K R+++ + + +Y LI GLC+EG+ +A K
Sbjct: 298 PDKITYTTLIDGCCKEGDLDTAFEHRK-RMIQENIRLDDVAYTALISGLCQEGRSVDAEK 356
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+ EM+ G +P Y+ I+ + K+G+V + L KEM Q DG
Sbjct: 357 MLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEM------QRDG 400
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G ++G ++ + EM+ G +PD +Y+ L+ C+E + A +
Sbjct: 263 PDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEH 322
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ D VAY +I G C+ G AE+ REM G + + T+ ++N +C+
Sbjct: 323 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCK 382
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
GDV + + +M R G P T VL+
Sbjct: 383 KGDVWTGSKLLKEMQRDGHVPSVVTYNVLM 412
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 24/190 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++I + ++S+ L + T N LI+ + + + + + E+
Sbjct: 245 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEM------------- 291
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+ +P+ T+ L+ G +EG AFE + + E RL D +Y+ L++
Sbjct: 292 ---SLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL----DDVAYTALISG 344
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+E R +AEK+ EM + D Y II FC+ G++ + +EM G S
Sbjct: 345 LCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPS 404
Query: 352 SVTFEHLVNG 361
VT+ L+NG
Sbjct: 405 VVTYNVLMNG 414
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 199/411 (48%), Gaps = 29/411 (7%)
Query: 87 LALRFFSFT-QHKSL-CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF 144
LAL+F ++ Q L +H + HIL RARL A+ +++ S +F
Sbjct: 27 LALKFLNWVIQQPGLELRHLTHMLSITTHILVRARLYENAKSILKHL--SQMGVGSKSVF 84
Query: 145 EVLVKTYRECGSAPFVFDLLIKCCLEVKNI-EKIETCVDIVRMLMSRGLSVKVSTCNALI 203
L+ TY C S P VFDLLI+ L + + +ET R++ RG + V TCN L+
Sbjct: 85 GALMNTYPLCKSNPSVFDLLIRVYLREGMVGDALET----FRLMGIRGFNPSVYTCNMLL 140
Query: 204 WEVSRGKGVISGYEIYREV-----------FGLDSDATAGIGKDVKRVVRVR-------- 244
++ + + V + + ++E+ F + + GK K ++
Sbjct: 141 GKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYV 200
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N ++ + ++G ++ ++ +M G E D +Y++L+ C+ R + L
Sbjct: 201 PSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLL 260
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++MR + + + + YN+II GF + G++ A F+EM + + + VT+ L++G+C
Sbjct: 261 LKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCH 320
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ + A+ + M G +P + L+ LC + FE + R+ G+
Sbjct: 321 DGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAK-FELSKSILERMRMNGMIVGCI 379
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+Y +I GLC G + E++K+ +M+ G P + +S I+G+ + G ++
Sbjct: 380 AYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIK 430
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 129/262 (49%), Gaps = 3/262 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
G+ S + G + + + P+V F+ L+ + REG + + M G P
Sbjct: 76 MGVGSKSVFGALMNTYPLCKSNPSV--FDLLIRVYLREGMVGDALETFRLMGIRGFNPSV 133
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
Y+ ++L+ +ER++ ++EM + V DV +N +I C G++ +A ++
Sbjct: 134 YTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKK 193
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M SG S VT+ ++N YC+ G +A+ + + M KG E + T +L+ +LC R
Sbjct: 194 MEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNR 253
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ +LK ++ K + P E +Y +I G +EGK+ A ++ EM P+ Y+
Sbjct: 254 SAKGYLLLK-KMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYN 312
Query: 463 AFIDGYMKEGNVEMATMLRKEM 484
A IDG+ +GN E A + + M
Sbjct: 313 ALIDGHCHDGNFEQALTILEMM 334
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 35/280 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V TF+ L+ GF R G + V+++ +M + G P+ Y+ L+ +C+ + EA
Sbjct: 409 VVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAF 468
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++ M + + N ++ C+ G++ AE FF M G +S+TF+ ++NGY
Sbjct: 469 KVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGY 528
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC------DKRRVFEALDILKARV-- 414
+G+ A ++++M + G P T L+ LC + +R+ + L + + V
Sbjct: 529 GNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDT 588
Query: 415 --------------------------VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
V+ + P +Y + GL GKM AL
Sbjct: 589 VTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGN 648
Query: 449 MVGKG-FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++GKG P +Y+ F+DG + G + A ++M +N
Sbjct: 649 LLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKN 688
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN +++AL+ G R FE + + M G C +Y+ ++ C + E+ K
Sbjct: 340 KPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVK 399
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L ++M V DVV ++ +I GFC +G++ +E +M +G+ +S+ + L+ YC
Sbjct: 400 LLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYC 459
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ GDV A VY M R G++ VL+ LC +V A + + K G P
Sbjct: 460 KTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVA-EYFFHHMSKIGNVPNS 518
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++ +I G G +A + EM+ G PS Y + + G + A L +
Sbjct: 519 ITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDK 578
Query: 484 M 484
+
Sbjct: 579 L 579
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 154/388 (39%), Gaps = 21/388 (5%)
Query: 118 ARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKI 177
AR + P + + + KLK L+K E G P V K +
Sbjct: 161 ARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKK-GRY 219
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE---------------- 221
+ ++++ + S+G+ T N L+ ++ + GY + ++
Sbjct: 220 KAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSI 279
Query: 222 VFGLDSDATAGIGKDVKR---VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+ G + G + + ++ + PN T+NAL+ G +G FE+ + M G
Sbjct: 280 INGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGP 339
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+P+ SYS L+ C + ++ + E MR + +AY +I G C G + + +
Sbjct: 340 KPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVK 399
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
+M GV VTF L+NG+CR G + + + M + G P LI C
Sbjct: 400 LLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYC 459
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
V EA + A + + G L+ LC++GK+ A M G P+
Sbjct: 460 KTGDVVEAFKVYVA-MSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNS 518
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ I+GY GN A + EM +
Sbjct: 519 ITFDCIINGYGNSGNGLKAFSMFDEMIK 546
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 150/386 (38%), Gaps = 50/386 (12%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
AL F + LC L + I++ SR + A D+ + P L + +L
Sbjct: 678 ALYFCEDMEKNGLCA-DLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNIL 736
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
+ Y + KN+ K C ++ ++M G+ TC++LI
Sbjct: 737 LHGYAK-----------------KKNLSK---CSNLYNIMMRTGIFPDKLTCHSLI---- 772
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFE 264
G A +G + + + V + TFN L++ +
Sbjct: 773 ---------------LGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVG 817
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
K D+ M PD ++ +++V ++E+ L EM ++ D Y ++
Sbjct: 818 KAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALV 877
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
C +G + A + EM G+ S V LV G + G V+ A LV + M RK
Sbjct: 878 NRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLI 937
Query: 385 PEGSTIEVLIGELCDKRRVFEAL---DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
P +T L+ C + EAL D + VK + +Y LI GLC +G +
Sbjct: 938 PTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVI----AYNVLISGLCADGDVAS 993
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDG 467
ALK+ E+ +G P++ Y ID
Sbjct: 994 ALKLYKEIKQRGLWPNMTTYCILIDA 1019
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 175/427 (40%), Gaps = 46/427 (10%)
Query: 98 KSLCKHSLSSYATIIHILSRARLIG------PARDVIRVALRSPENDPKLKLFEVLVKTY 151
LC+H+ + IL R R+ G +I R+ + +KL + ++K
Sbjct: 351 NGLCRHA--KFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKD- 407
Query: 152 RECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG 209
G P V F +LI V I+ ++ +I+ + GL+ LI+ +
Sbjct: 408 ---GVVPDVVTFSVLINGFCRVGKIKNVK---EIICKMYKAGLAPNSIIYTTLIYNYCKT 461
Query: 210 KGVISGYEIYREVFGLDSDAT--------AGIGKDVK------------RVVRVRPNVHT 249
V+ +++Y + + DA + + KD K ++ V PN T
Sbjct: 462 GDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNV-PNSIT 520
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F+ ++ G+ G K ++ EM + G P ++Y L+ C + +EA++L +++
Sbjct: 521 FDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLH 580
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
D V YNTI+ + G + A F EM V S T+ + G R G +
Sbjct: 581 YIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMV 640
Query: 370 SAILVYNDMCRKG-FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+A+ Y ++ KG PE + L + AL + + K GL +
Sbjct: 641 AALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCE-DMEKNGLCADLIATNV 699
Query: 429 LIKGLCEEGKMEEALKVQAEM-VGKGFEPSLEIYSAFIDGYMKEGNVEMAT-----MLRK 482
++ G GKM +A + M G PSL Y+ + GY K+ N+ + M+R
Sbjct: 700 ILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRT 759
Query: 483 EMFENQV 489
+F +++
Sbjct: 760 GIFPDKL 766
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 112/244 (45%), Gaps = 1/244 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ + P++ T+N L+ G+ ++ K +++ M R G PD + L+ FC+ +
Sbjct: 724 ITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDV 783
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
KL ++M V D +N +I +CE E+ +A + M L + T + +++
Sbjct: 784 GLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIIS 843
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
R V + L+ ++M +G P+ L+ +C + A LK + G+
Sbjct: 844 VLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFK-LKDEMEALGIS 902
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+ + L++GL + GK+EEA V M+ K P++ ++ + + + ++ A L
Sbjct: 903 SGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKL 962
Query: 481 RKEM 484
+ M
Sbjct: 963 KDTM 966
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 163/314 (51%), Gaps = 17/314 (5%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
++ + D+ ++S+G+S V T +ALI SG+ I G +DA
Sbjct: 209 VKLVNEAFDLYSEMVSKGISPDVVTYSALI----------SGFCI----LGKLNDAIGLF 254
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
K + + P+V+TF+ L+ GF +EG ++ ++V M + G +PD +Y LM +C
Sbjct: 255 NKMISE--EINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYC 312
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+++ +A+ ++ M V +V +YN +I GFC+I ++ A F+EM + V
Sbjct: 313 LVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVV 372
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ L++G C++G + A+ + ++M +G + T ++ LC +V +A+ +L +
Sbjct: 373 TYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALL-TK 431
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+ G+ P +Y LI GLC+ G++++A + +++ KG+ ++ Y+ I G+
Sbjct: 432 MKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDL 491
Query: 474 VEMATMLRKEMFEN 487
+ A L +M +N
Sbjct: 492 FDKALALLSKMEDN 505
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 165/360 (45%), Gaps = 18/360 (5%)
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
L F +L+ + + G F F + ++K I + +GL +K
Sbjct: 91 LVTFNILINCFSQLGHTHFSFSVFANI------LKKGYEPNAITLTTLIKGLCLKGQIHQ 144
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD------VKRV--VRVRPNVHTFNA 252
AL + K V G+ + + +G + +G+ ++RV V+PNV +N
Sbjct: 145 ALHF---HDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNT 201
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
++ + + D++ EM G PD +YS L++ FC ++ +A L+ +M +
Sbjct: 202 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEE 261
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ DV ++ ++ GFC+ G + A+ M G++ VT+ L++GYC V+ A
Sbjct: 262 INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAK 321
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
++N M + G + ++I C ++V EA+++ K K + P +Y LI G
Sbjct: 322 SIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCK-NIIPDVVTYNSLIDG 380
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
LC+ GK+ ALK+ EM +G Y++ +D K V+ A L +M + ++ +
Sbjct: 381 LCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 440
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 129/291 (44%), Gaps = 4/291 (1%)
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN--VHTFNALMVGFYREG 261
++ K +IS +Y ++ D + R++ + P + F ++ +
Sbjct: 12 FQFPNPKFIIST-SLYSQLHHHHQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKIN 70
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
++ + EM G D ++++L+ F + + ++ + K E + +
Sbjct: 71 CYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLT 130
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
T+I G C G++ +A F ++ G + V + L+NG C+ G +A+ + + K
Sbjct: 131 TLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGK 190
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
+P +I +C + V EA D+ V K G+ P +Y LI G C GK+ +
Sbjct: 191 LVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK-GISPDVVTYSALISGFCILGKLND 249
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
A+ + +M+ + P + +S +DG+ KEG V+ A + M + ++ +
Sbjct: 250 AIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPD 300
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 125/240 (52%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + FN + G + G + V+ M L PD ++++L+A C+ +A L
Sbjct: 530 PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASAL 589
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EEM KN++ DV+ + +I G C+ G++ A + MG GV + VT+ LV+G C+
Sbjct: 590 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 649
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G ++ A +M G P+ T L+ LC R +AL ++ + + FG P
Sbjct: 650 SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLV-SELKSFGWDPDTV 708
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L+ GL + G+ E+A+ V EMVGKG P + Y+ ID K G++E A L +M
Sbjct: 709 TYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDM 768
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 196/425 (46%), Gaps = 37/425 (8%)
Query: 65 CRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPA 124
C+ L P+ + I L N L +F+ + KH++ S+ +++L ++ A
Sbjct: 71 CKGRLHPSVAAAILAQLDGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKA 130
Query: 125 RDVIRVALRSPENDPKLKLFEVLVK-TYRECGSAP-----FVFDLLIKCCLEVKNIEKIE 178
D+ R L P P + L++ TY+ G F + NI
Sbjct: 131 IDLFRSRL-PPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSSRSVADYNIVLQS 189
Query: 179 TC--------VDIVRMLMSR-GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDA 229
C ++I R M+R G++ + T N +I + + + +G E++ E+
Sbjct: 190 LCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL------- 242
Query: 230 TAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
V+R P+V T+N L+ + G E+ + +M+ C P+ +YSVL+
Sbjct: 243 -------VER--GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLI 293
Query: 290 AVFCEERRMREAEKLWEEMRDK--NVEHDVVAYNTIIGGFCEIGEMARAEEFFREM--GL 345
C+ R+ EA +L +EM K +V +++ YN+ + G C+ A A E R + G
Sbjct: 294 NGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS 353
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
V +VTF L++G C+ G +D A V++DM G+ P T L+ LC ++
Sbjct: 354 LRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMER 413
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
A ++++ V K G+ P +Y L+ C+ +++EAL++ M +G P++ +++ I
Sbjct: 414 AHAMIESMVDK-GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSII 472
Query: 466 DGYMK 470
DG K
Sbjct: 473 DGLCK 477
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 126/254 (49%), Gaps = 6/254 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++P+V TF AL+ G + G E D+ M LG P+ +Y+ L+ C+ R+ EA
Sbjct: 597 NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEA 656
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ EEM D + Y +++ C A + E+ G + +VT+ LV+G
Sbjct: 657 CQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDG 716
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVKFG 418
++G + AI V +M KG P+ T LI LC + EA + + +RV +
Sbjct: 717 LWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRC- 775
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE--PSLEIYSAFIDGYMKEGNVEM 476
P +Y LI GLC+ G+++EA ++ EM+ K + P++ Y++F+DG K+ +
Sbjct: 776 CVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAE 835
Query: 477 ATMLRKEMFENQVR 490
A L + + + +R
Sbjct: 836 ACELMRSLRDGSLR 849
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 122/263 (46%), Gaps = 28/263 (10%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+RV P+ TF+ L+ G + G ++ +V+ +M G P+ +Y+VLM C+ +M
Sbjct: 848 LRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMER 907
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A + E M DK V DV+ Y+ ++ FC+ + A E M G + VTF +++
Sbjct: 908 AHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIID 967
Query: 361 GYCRAGDVDSAILVYNDMCRK-GFEPEGSTIEVLIGEL---------------------- 397
G C++ A +++DM K G P+ T LI L
Sbjct: 968 GLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTY 1027
Query: 398 ---CDKRRVFEALDILKA--RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
C + + D+ +A R+++ L P + ++ LI G C+ G E+A + EMV K
Sbjct: 1028 AFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 1087
Query: 453 GFEPSLEIYSAFIDGYMKEGNVE 475
+P + + A IDG K G VE
Sbjct: 1088 NLQPDVMTFGALIDGLCKAGQVE 1110
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 133/275 (48%), Gaps = 11/275 (4%)
Query: 229 ATAGIGKDVKRVV-------RVRPNVHTFNALMVGFYREGAFEKVEDVW-VEMARLGCEP 280
AT G DV+R + +V +N ++ R G + +++ EMAR G P
Sbjct: 155 ATYKAGGDVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAP 214
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+Y+ ++ C+ + +L+EE+ ++ DVV YNT+I C+ G++ A
Sbjct: 215 TIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLH 274
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE--PEGSTIEVLIGELC 398
+M + VT+ L+NG C+ G +D A + +M RK + P T + LC
Sbjct: 275 GDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLC 334
Query: 399 DKRRVFEALDILKA-RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+ EA +++++ R + P ++ LI GLC+ G+++EA V +M+ G+ P+
Sbjct: 335 KQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPN 394
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ Y+A ++G K +E A + + M + V +
Sbjct: 395 VITYNALVNGLCKADKMERAHAMIESMVDKGVTPD 429
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 143/309 (46%), Gaps = 20/309 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ ++++ + SRG + V T N++I + + ++++
Sbjct: 445 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMF---------------D 489
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ + P+ T+ L+ G +R G + E + M +PD Y+++ + +
Sbjct: 490 DMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNCCINGLSKL 545
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ A +++ M + + D V +N +I G C+ G +A F EM ++ +TF
Sbjct: 546 GDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTF 605
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C+AG V++A + + M G P T L+ LC R+ EA L+ +V
Sbjct: 606 GALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE-EMV 664
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G P +Y L+ LC + ++AL++ +E+ G++P Y+ +DG K G E
Sbjct: 665 SSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTE 724
Query: 476 MATMLRKEM 484
A + +EM
Sbjct: 725 QAITVLEEM 733
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 8/257 (3%)
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM--ARLGCEPDCYSYSVLMAVFCE 294
+++ V PN+ T+N+ + G ++ + ++ + L PD ++S L+ C+
Sbjct: 807 MRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCK 866
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ EA ++++M +VV YN ++ G C+ +M RA M GV +T
Sbjct: 867 CGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVIT 926
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ LV+ +C+A VD A+ + + M +G P T +I LC + EA +
Sbjct: 927 YSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMT 986
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+K GL P + +Y LI GL G +A + M +P ++ I+G K G+V
Sbjct: 987 LKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGLSKLGDV 1042
Query: 475 EMAT--MLRKEMFENQV 489
A ML E+ ++V
Sbjct: 1043 SRALHRMLELELVPDKV 1059
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 14/170 (8%)
Query: 245 PNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
PNV TFN+++ G + AF+ +D+ + + G PD +Y L+ +
Sbjct: 957 PNVVTFNSIIDGLCKSDQSGEAFQMFDDMTL---KHGLAPDKITYCTLIDGLFRTGWAGQ 1013
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
AE L + M D D A+N I G ++G+++RA E+ L VTF L+
Sbjct: 1014 AEVLLDAMPDP----DTYAFNCCINGLSKLGDVSRALHRMLELELV---PDKVTFNILIA 1066
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
G C+AG+ + A ++ +M K +P+ T LI LC +V DI+
Sbjct: 1067 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 22/194 (11%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
++ ++++ + SRG + V T N++I + + SG E F + D T G
Sbjct: 940 VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQ--SG-----EAFQMFDDMTLKHG-- 990
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
+ P+ T+ L+ G +R G + E + M +PD Y+++ +
Sbjct: 991 ------LAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGL---S 1037
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
++ + + M + + D V +N +I G C+ G +A F EM ++ +TF
Sbjct: 1038 KLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFG 1097
Query: 357 HLVNGYCRAGDVDS 370
L++G C+AG V++
Sbjct: 1098 ALIDGLCKAGQVEA 1111
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 166/384 (43%), Gaps = 56/384 (14%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
D L++FE +VK R+ + + C I+K +T + R ++ +G S
Sbjct: 131 DLALEVFEKIVKNGRKPDVVTYTIIIHGVC-----KIKKFDTAIQFWRDMIHKGFSPDNK 185
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
C A++ + G+ V YE+ DV + RV+ + +NAL+ GF
Sbjct: 186 ACGAIVVGLCDGRKVDLAYELI---------------IDVMKSGRVKLSTLVYNALISGF 230
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH-- 315
R G +K + + M R GCEPD +Y+V + FC+E + +A+KL + M +E
Sbjct: 231 CRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDV 290
Query: 316 ---------------------------------DVVAYNTIIGGFCEIGEMARAEEFFRE 342
DVV+YNTII FC+IG+ A + F E
Sbjct: 291 YSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEE 350
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
MG G+ VTF + + G + A + + M G P+ +I LC +
Sbjct: 351 MGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGK 410
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
V A I +V+ G+ P S+ LI G C+ ++ EA+ + EM +G P Y
Sbjct: 411 VEMAHSIF-CDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYK 469
Query: 463 AFIDGYMKEGNVEMATMLRKEMFE 486
I G ++E + +A M+ +M +
Sbjct: 470 LIIGGLIEEKKISIACMVWGQMMD 493
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 128/278 (46%), Gaps = 37/278 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ FN + + EG + +V+ ++ + G +PD +Y++++ C+ ++ A +
Sbjct: 112 PDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQF 171
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG-VESSSVTFEHLVNGYC 363
W +M K D A I+ G C+ ++ A E ++ SG V+ S++ + L++G+C
Sbjct: 172 WRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFC 231
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
RAG +D A + + M R G EP+ T V + CD+ + +A +LK + + G+ P
Sbjct: 232 RAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKL-MERSGIEPDV 290
Query: 424 KSYMFLIKGLCEE-----------------------------------GKMEEALKVQAE 448
SY L+KG+C+ G A K+ E
Sbjct: 291 YSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEE 350
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
M KG P + ++ FI ++ +G+ +A L +M E
Sbjct: 351 MGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTE 388
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 8/226 (3%)
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
F+ + +M G ++YS + C+ + ++L +M N D+ A+N
Sbjct: 60 FDLANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNI 119
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+ G + A E F ++ +G + VT+ +++G C+ D+AI + DM KG
Sbjct: 120 YLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKG 179
Query: 383 FEPEGSTIEVLIGELCDKRRVFEA----LDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
F P+ ++ LCD R+V A +D++K+ VK Y LI G C G+
Sbjct: 180 FSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTL----VYNALISGFCRAGR 235
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+++A +++ M G EP L Y+ F++ + E ++ A L K M
Sbjct: 236 IDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLM 281
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 77/152 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V TF + F +G+F + + +M +G PDC Y+ ++ C+ ++ A
Sbjct: 356 IPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAH 415
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ +M ++ + DV+++N +I GFC+ ++ A + EM G VT++ ++ G
Sbjct: 416 SIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGL 475
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
+ A +V+ M KGF + + + LI
Sbjct: 476 IEEKKISIACMVWGQMMDKGFTLDRAIAQTLI 507
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 95/222 (42%), Gaps = 17/222 (7%)
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y +A + + + +A ++++EM N + YN IG A ++ +MG
Sbjct: 12 YRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMG 71
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G SS T+ + G C+ + + +DM P+ + + L + R+
Sbjct: 72 TRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRID 131
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
AL++ + ++VK G P +Y +I G+C+ K + A++ +M+ KGF P + A
Sbjct: 132 LALEVFE-KIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAI 190
Query: 465 IDGY----------------MKEGNVEMATMLRKEMFENQVR 490
+ G MK G V+++T++ + R
Sbjct: 191 VVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCR 232
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ + ++ + G E ++ +M G PD S++ L+ FC+ R+ EA
Sbjct: 391 LSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAM 450
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L+EEM+++ D V Y IIGG E +++ A + +M G + L+ G
Sbjct: 451 HLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRG 509
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 200/464 (43%), Gaps = 43/464 (9%)
Query: 23 LSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLK 82
+ ++S STPP Z +++ S+W H + LTP S + L
Sbjct: 57 FNSLASSESTPPITZE---------VISKSVLSSQW-HFIEQVSPNLTPALISNVLYNLC 106
Query: 83 NNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGP--ARDVIRVALRSPENDPK 140
+ P L F H L H L + + + ++ ARL P A +++ + + +
Sbjct: 107 SKPQLV---SDFIHH--LHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMETRIATNR 161
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
E+ + R + VFDLL K++ + + + G V + N
Sbjct: 162 ELFDELTLSRDRLSVKSSIVFDLLEG---------KLKKAREFIGFMEGLGFKPNVVSYN 212
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
+I S +G I G R + D RV + P+ +T+ +L+ G +E
Sbjct: 213 TIIHGYS-SRGNIEGA---RRIL------------DAMRVKGIEPDSYTYGSLISGMCKE 256
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G E+ ++ +M +G P+ +Y+ L+ +C + + A +EM K + V Y
Sbjct: 257 GRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTY 316
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
N ++ G M A++ +EM G+ ++T+ L+NGY R G+ A ++N+M
Sbjct: 317 NLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLS 376
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
KG EP T LI L + R+ EA D+ + +++ G+ P + +I G C G +E
Sbjct: 377 KGIEPTHVTYTSLIYVLSRRNRMKEADDLFE-KILDQGVSPDVIMFNAMIDGHCANGNVE 435
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
A + EM K P ++ + G +EG VE A ML EM
Sbjct: 436 RAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 479
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 179/383 (46%), Gaps = 24/383 (6%)
Query: 102 KHSLSSYATIIH-ILSRARLIGPAR--DVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
K ++ SY TIIH SR + G R D +RV P++ L + K R A
Sbjct: 205 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR-LEEAS 263
Query: 159 FVFDLLIKCCLEVKNIEKIETCVD--IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGY 216
+FD +++ L V N T +D + + R S + KG++
Sbjct: 264 GLFDKMVEIGL-VPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK---------KGIMPSV 313
Query: 217 EIYRE-VFGLDSDATAGIGKDVKRVVRVR---PNVHTFNALMVGFYREGAFEKVEDVWVE 272
Y V L + G D+ + +R + P+ T+N L+ G+ R G ++ D+ E
Sbjct: 314 STYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNE 373
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M G EP +Y+ L+ V RM+EA+ L+E++ D+ V DV+ +N +I G C G
Sbjct: 374 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGN 433
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ RA +EM V VTF L+ G CR G V+ A ++ ++M +G +P+ +
Sbjct: 434 VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNT 493
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI + + +A + + ++ G PT +Y LIK LC+ + + A ++ EMV K
Sbjct: 494 LISGYGRRGDIKDAFXV-RDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 552
Query: 453 GFEPSLEIYSAFIDGYMKEGNVE 475
G P Y + I+G GNV+
Sbjct: 553 GISPDDSTYLSLIEGM---GNVD 572
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 36/159 (22%)
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G++ +A EF M G + + V++ +++GY G+++ A + + M KG EP+ T
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT- 245
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
Y LI G+C+EG++EEA + +MV
Sbjct: 246 -----------------------------------YGSLISGMCKEGRLEEASGLFDKMV 270
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G P+ Y+ IDGY +G++E A R EM + +
Sbjct: 271 EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGI 309
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 34/280 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV +FN ++ + G ++ +V+ EMA CEPD ++Y LM C+E R+ EA
Sbjct: 184 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 243
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM+ + V +N +I G C+ G+M R + M L G + VT+ ++NG
Sbjct: 244 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGL 303
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA---------- 412
C G +D A+ + + M P T LI L + R + + +L +
Sbjct: 304 CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 363
Query: 413 ---RVVKFGLFPTEKS---------------------YMFLIKGLCEEGKMEEALKVQAE 448
+ GLF EKS Y LI GLC EGK++EA ++ E
Sbjct: 364 YAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCE 423
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
MV KG P+ YS+ I G+ K GN + A + KEM +N
Sbjct: 424 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNN 463
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N ++ G +G +K + M C P+ +Y L+ ++ R + L
Sbjct: 291 PNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHL 350
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ ++ + AY+T+I G + + A +++M G + + V + L++G CR
Sbjct: 351 LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCR 410
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +D A + +M KG P T LI +A+ + K + K P E
Sbjct: 411 EGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWK-EMAKNNCVPNEI 469
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI GLCE+GK+ EA+ + M+G+G P + YS+ I G G+VE+ L EM
Sbjct: 470 CYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEM 529
Query: 485 F 485
Sbjct: 530 L 530
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN+ ++AL+ G REG ++ +++ EM GC P+ ++YS L+ F + ++A +
Sbjct: 395 QPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIR 454
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+W+EM N + + Y+ +I G CE G++ A + M G+ V + +++G C
Sbjct: 455 VWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLC 514
Query: 364 RAGDVDSAILVYNDM-CRKG-FEPEGSTIEVLIGELCDKRRVFEALDILKA 412
AG V+ + ++N+M C++ +P+ T +L+ LC + + A+D+L +
Sbjct: 515 NAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNS 565
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 112/229 (48%), Gaps = 1/229 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N + ++ L+ G ++E E+ +W +M GC+P+ YS L+ C E ++ EA+++
Sbjct: 362 NEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEIL 421
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM +K + Y+++I GF + G +A ++EM + + + + L++G C
Sbjct: 422 CEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCED 481
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK-FGLFPTEK 424
G + A++++ M +G P+ +I LC+ V L + + + P
Sbjct: 482 GKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVV 541
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+Y L++ LC++ + A+ + M+ +G P L + F++ ++ N
Sbjct: 542 TYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLN 590
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 3/197 (1%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWE--EMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
C S++ ++ V +E A + +E N+ +V+++N +I C++G + R
Sbjct: 147 CRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDR 206
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A E FREM + E T+ L++G C+ +D A+L+ ++M +G P T VLI
Sbjct: 207 AIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLIN 266
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
LC K + ++ +K G P E +Y +I GLC +GK+++A+ + MV
Sbjct: 267 GLCKKGDMVRVTKLVDNMFLK-GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCV 325
Query: 456 PSLEIYSAFIDGYMKEG 472
P+ Y I+G +K+G
Sbjct: 326 PNDVTYGTLINGLVKQG 342
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 118/252 (46%), Gaps = 12/252 (4%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK---LW 305
TF +L+ + G F + V+ M R E + + VF + EK L+
Sbjct: 82 TFYSLIENYANSGDFGTLFQVFDRMKR---ERRVFIEKNFILVFRAYGKAHLPEKAIELF 138
Query: 306 EEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG---VESSSVTFEHLVNG 361
M D+ V ++N+++ + G RA EF+ E G+ G + + ++F ++
Sbjct: 139 GRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFY-ECGVGGKTNISPNVLSFNLVIKA 197
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G VD AI V+ +M + EP+ T L+ LC + R+ EA+ +L ++ G FP
Sbjct: 198 MCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIE-GCFP 256
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ ++ LI GLC++G M K+ M KG P+ Y+ I+G +G ++ A L
Sbjct: 257 SSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLL 316
Query: 482 KEMFENQVRQED 493
M ++ D
Sbjct: 317 DRMVASKCVPND 328
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 132/532 (24%), Positives = 229/532 (43%), Gaps = 78/532 (14%)
Query: 26 FSTSSS---TPP---SDQSHNLIATVVSLLTHHRSKSRWNHLLSL--CRSGLTPTQFSQI 77
FS++S+ TPP SD SH L ++S+L SK W + SL +TP+ S +
Sbjct: 20 FSSTSTLLHTPPEAESDPSH-LPHHLLSIL----SKPNWQNNPSLKSLLPAITPSHVSSL 74
Query: 78 ALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN 137
L +PH AL+F + KH++ SYA+++ ++ +++ +I ++ +
Sbjct: 75 -FSLNLDPHTALQFSYWISQTPNFKHNVDSYASLLTLIDHHKIVSDVPKIIVSMIKCCYS 133
Query: 138 DP-------------KLKLFEVLVKTYRE-------------------------CGSAPF 159
P K + ++ +K Y E +
Sbjct: 134 APDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIY 193
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
F+L+I ++ +++ + + ++ GLS T + I R K V S + ++
Sbjct: 194 TFNLMINVYCKMGFVKEAK---QFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVF 250
Query: 220 RE------------VFGLDSDATAG-IGKDVKRVVRVR-----PNVHTFNALMVGFYREG 261
E + GL AG I + V VR++ PNV+T+ AL+ G R+
Sbjct: 251 EEMPNRNEVSYNQLIHGL---CEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN 307
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
K + EM PD +Y+ L+A C + A +L M+++ + D Y
Sbjct: 308 V-HKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYG 366
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
I C+ + A F + GV ++ + + L++GYC+ G VD A ++ M K
Sbjct: 367 CFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSK 426
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
P T LI LC + EAL + ++VK GL PT ++ LI + ++G ++
Sbjct: 427 NCSPNAYTFNALIHGLCSAGNLKEALSLFD-QMVKMGLKPTVYTFNILIGRMLKQGDFDD 485
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
A K +M+ G +P Y+AFI+ Y G V+ A + +M E V +D
Sbjct: 486 AHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDD 537
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 124/242 (51%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N+L+ G R G + + M G PD +Y + C+ R+ EA +L
Sbjct: 325 PDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRL 384
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ + ++ V +V+ Y+ +I G+C++G++ A F +M ++ TF L++G C
Sbjct: 385 FDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCS 444
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG++ A+ +++ M + G +P T +LIG + + +A L+ +++ G P +
Sbjct: 445 AGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQ-KMMSSGEKPVAR 503
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y I+ C GK++EA + +M +G P Y++ I Y K G A + K M
Sbjct: 504 TYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSM 563
Query: 485 FE 486
F+
Sbjct: 564 FD 565
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 107/249 (42%), Gaps = 28/249 (11%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +TFNAL+ G G ++ ++ +M ++G +P Y++++L+ ++ +A K
Sbjct: 430 PNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKC 489
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M + YN I +C G++ AE+ +M GV T+ L+ Y +
Sbjct: 490 LQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGK 549
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA------------------ 406
G SA V M EP T LI +L DKR V E
Sbjct: 550 LGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGS 609
Query: 407 -------LDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
DI L + K G P K Y LI G+C+ + ALK+ +M +G P
Sbjct: 610 NMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISP 669
Query: 457 SLEIYSAFI 465
S +++A I
Sbjct: 670 SEMVFNAVI 678
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 156/375 (41%), Gaps = 53/375 (14%)
Query: 143 LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVD-IVRMLMSRGLSVKVSTCNA 201
LFE ++ + C + F+ LI N+++ + D +V+M GL V T N
Sbjct: 419 LFEKMLS--KNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKM----GLKPTVYTFNI 472
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
LI + + ++ +++ ++G +P T+NA + + G
Sbjct: 473 LIGRMLKQGDFDDAHKCLQKMM------SSG----------EKPVARTYNAFIEVYCSAG 516
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
++ ED+ V+M G PD ++Y+ L+ + + A + + M D + E +
Sbjct: 517 KVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFL 576
Query: 322 TII---------------------GGFCEI--GEMARAEEF------FREMGLSGVESSS 352
++I F ++ M + EF F EM G S
Sbjct: 577 SLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDS 636
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
+E L++G C+ ++ A+ + + M ++G P +I C ++ EA +I++
Sbjct: 637 KCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVED 696
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ G P + LI GL EEG+ E V ++ G G+ + IDG +K+G
Sbjct: 697 MICS-GHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQG 755
Query: 473 NVEMATMLRKEMFEN 487
VE + L +EM +N
Sbjct: 756 LVEEFSQLFEEMEKN 770
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 7/174 (4%)
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
F+ V +++ EM + GC PD Y L++ C+ + A KL ++M+ + + + +N
Sbjct: 617 FDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNA 676
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH---LVNGYCRAGDVDSAILVYNDMC 379
+I C++ + A +M SG S EH L+ G G+ + V+ +
Sbjct: 677 VISCCCKLQKYGEAANIVEDMICSG---HSPQLEHCKTLICGLYEEGETERGNSVFKKLR 733
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
G+ + ++LI + K+ + E L + K G + ++Y L + L
Sbjct: 734 GCGYNDDEIAWKILIDGML-KQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 126/243 (51%), Gaps = 5/243 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+NAL+ G G + ++ M + G PD +Y+ L+ FC+ + EA K+
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ + DVV YN +I GFC+ ++ A+ + M + VT+ LVNG C+
Sbjct: 68 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC-DKRRVFEALDILKARVVKFGLFPTE 423
G VD A ++ D KGF P T LI LC + R V EAL + V+K G P
Sbjct: 128 NGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLF-GSVLKQGYEPEV 183
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI GL +E ++ EA ++ + +V G EP Y+ FIDG K G VE A ++ K+
Sbjct: 184 PTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKD 243
Query: 484 MFE 486
M E
Sbjct: 244 MDE 246
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 154/310 (49%), Gaps = 20/310 (6%)
Query: 181 VDIVRMLM-SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
VD RML+ +G S V T + LI SG + RE+ G+ S+A G +K+
Sbjct: 131 VDEARMLIVDKGFSPNVITYSTLI----------SG--LCRELRGV-SEALKLFGSVLKQ 177
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
P V T+N L+ G +E + +++ + + G EPD +Y+V + C+ R+
Sbjct: 178 --GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 235
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A + ++M +K DVV++N +I G C+ + AE M G ++++F L+
Sbjct: 236 DALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 295
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR---RVFEALDILKARVVK 416
G CRAG A+ + +M ++G +P T +L+ LC R R+ EA+ + A + K
Sbjct: 296 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEK 355
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G P +Y LI GL + GK+++A ++ M KG P++ Y++ I G V+
Sbjct: 356 -GRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDE 414
Query: 477 ATMLRKEMFE 486
A L M E
Sbjct: 415 ALELFVAMVE 424
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 114/226 (50%), Gaps = 4/226 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+ + G + G E + +M GC PD S++ ++ C+E+R+ EAE
Sbjct: 214 LEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAE 273
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L M K + +++NT+I G C G+ +A F+EM GV+ + VT+ LV+G
Sbjct: 274 VLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGL 333
Query: 363 CRA---GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
C+A G + AI +++ M KG P+ T LI L ++ +A +L A K G
Sbjct: 334 CKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK-GC 392
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
P +Y LI GLC K++EAL++ MV KG P Y I
Sbjct: 393 IPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 132/282 (46%), Gaps = 40/282 (14%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N L+ GF + G ++ ++ + G PD +Y+ L+ FC+ ++ EA+++
Sbjct: 43 PDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRI 102
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +N+ DVV YN+++ G C+ G + A + G S + +T+ L++G CR
Sbjct: 103 LQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFS---PNVITYSTLISGLCR 159
Query: 365 A-GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
V A+ ++ + ++G+EPE T +LI L + RV EA ++ +VK GL P
Sbjct: 160 ELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSG-LVKHGLEPDA 218
Query: 424 KSYMFLIKGLCEEG-----------------------------------KMEEALKVQAE 448
+Y I GLC+ G +++EA + +
Sbjct: 219 ITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSG 278
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
M KG P+ ++ I G + G + A KEM + V+
Sbjct: 279 MEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVK 320
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 243 VRPNVHTFNALMVGFYR---EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V+P V T+N L+ G + EG ++ ++ M G PD +YS L+ + ++
Sbjct: 319 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLD 378
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A +L M K +V YN++I G C + ++ A E F M G ++T+ ++
Sbjct: 379 DARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
Query: 360 N 360
+
Sbjct: 439 S 439
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 164/334 (49%), Gaps = 20/334 (5%)
Query: 154 CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVI 213
C + + L++ + + E+ + + R + ++G S V + + LI + RG+ V
Sbjct: 48 CVPNTYTYGYLLRSLCQAQRFEEARS---VFRGMAAQGCSPNVFSYSILIAGLCRGQKVD 104
Query: 214 SGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
E+ E+ +D +PNV T+ +L+ G + G ++ D++ M
Sbjct: 105 EAAELLNEM--IDGGH--------------QPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
GC PD Y+VL+ F ++ M EA +L+EEM +K V YN+++ GF GE
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
R + F++M G + TF +L++G+C+ GD+ A ++ +M G P+ + L
Sbjct: 209 GRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTL 268
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
I +C K + EA +L+ +++ G+ P SY LI G + G ++ A+K+ E+ G
Sbjct: 269 IRGMCSKGKPHEAQRLLR-EMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
EP YS ID + G V A ++ K+M N
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIAN 361
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 152/305 (49%), Gaps = 22/305 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE---------VFGLD 226
K++ VD+ ++ RG N LI S+ + Y ++ E VF +
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196
Query: 227 SDATA-----------GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
S + + KD+ R V PN+ TFN L+ GF + G + +++EM
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCV-PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
LGC PD SY+ L+ C + + EA++L EM V D+V+YN +I G+ + G +
Sbjct: 256 LGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A + F E+ SG+E + ++ +++ CRAG V +A +V+ DM G P+ + + L+
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVI 375
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
LC R+ E+ ++ +A +VKF P Y L+ LC+ + ++ ++ E+ +GF
Sbjct: 376 GLCRGERLTESCELFQA-MVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFS 434
Query: 456 PSLEI 460
P +EI
Sbjct: 435 PDVEI 439
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 116/236 (49%), Gaps = 1/236 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++N L+ + G + V + +M GC P+ Y+Y L+ C+ +R EA ++ M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ +V +Y+ +I G C ++ A E EM G + + VT+ L++G C+ G +
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A+ +++ M +G P+G VLI K + EA + + + K G PT +Y
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK-GCIPTVFTYNS 197
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
L+ G +G+ + +M+ +G P++ ++ +DG+ K G++ A L EM
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 1/173 (0%)
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
H ++YN ++ + G + +M +G ++ T+ +L+ C+A + A
Sbjct: 14 NHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARS 73
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
V+ M +G P + +LI LC ++V EA ++L ++ G P +Y L+ GL
Sbjct: 74 VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLN-EMIDGGHQPNVVTYGSLLSGL 132
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
C+ GK++EA+ + + MV +G P +Y+ IDG+ K+G++ A L +EM E
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLE 185
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 142/263 (53%), Gaps = 3/263 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
DAT + KR + P+V TFNAL+ +EG + E+++ EM R +PD +YS
Sbjct: 238 DDATRMVSCMTKR--EIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYS 295
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
+L+ C R+ EAE+++ M K DVV Y+ +I G+C+ ++ + F EM
Sbjct: 296 LLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
GV ++VT+ L+ GYCRAG ++ A ++ M G P T VL+ LCD ++ +A
Sbjct: 356 GVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKA 415
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L IL A + K G+ +Y +I+G+C+ G++ +A + + KG P + Y+A +
Sbjct: 416 LVIL-ADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMML 474
Query: 467 GYMKEGNVEMATMLRKEMFENQV 489
G K+G A L ++M E+ +
Sbjct: 475 GLYKKGLRGEADALFRKMKEDGI 497
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 1/244 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ T N L+ F R +M +LG EPD ++ L+ FC R+ +A ++
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMF 174
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M + E +VV YNTII G C+ ++ A + M + G+ +VT+ L++G C +
Sbjct: 175 DRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNS 234
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G D A + + M ++ P+ T LI + R+ EA + L +++ L P +
Sbjct: 235 GRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEE-LYEEMIRRSLDPDIVT 293
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI GLC +++EA ++ MV KG P + YS I+GY K VE L EM
Sbjct: 294 YSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 486 ENQV 489
+ V
Sbjct: 354 QRGV 357
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 157/360 (43%), Gaps = 22/360 (6%)
Query: 125 RDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIV 184
R+++R +R + D L LF +V +C P + D + + ++K + + +
Sbjct: 50 REMLRNGIRYMKLDDSLDLFFHMV----QCRPLPSIADF-SRLLSAISKMKKYDVVIYLW 104
Query: 185 RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVR 244
+ G+ + TCN L+ R + S A + +GK +K +
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQL--------------SLALSFLGKMMK--LGHE 148
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ TF +L+ GF R ++ M +G EP+ Y+ ++ C+ +++ A L
Sbjct: 149 PDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M + D V YN++I G C G A M + TF L++ +
Sbjct: 209 LNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A +Y +M R+ +P+ T +LI LC R+ EA + V K G FP
Sbjct: 269 EGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSK-GCFPDVV 327
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C+ K+E +K+ EM +G + Y+ I GY + G + +A + K M
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWM 387
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 113/224 (50%), Gaps = 5/224 (2%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
D++ M + P +S L++ + ++ LWE+M+ + H++ N ++ F
Sbjct: 67 DLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C +++ A F +M G E VTF L+NG+CR + A+ +++ M G+EP
Sbjct: 127 CRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNV 186
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+I LC ++V ALD+L V G+ P +Y LI GLC G+ ++A ++ +
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEVD-GIRPDAVTYNSLISGLCNSGRWDDATRMVS 245
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
M + P + ++A ID +KEG + A +E++E +R+
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRISEA----EELYEEMIRR 285
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++S+G V T + LI + K V G +++ E+ + VVR N
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM-------------SQRGVVR---N 360
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
T+ L+ G+ R G E+++ M G P+ +Y+VL+ C+ ++ +A +
Sbjct: 361 TVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+M+ ++ D+V YN II G C+ GE+A A + + + L G+ T+ ++ G + G
Sbjct: 421 DMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKG 480
Query: 367 DVDSAILVYNDMCRKGFEPE 386
A ++ M G P
Sbjct: 481 LRGEADALFRKMKEDGILPN 500
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 1/142 (0%)
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
S F L++ + D I ++ M G T +L+ C ++ AL L
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+++K G P ++ L+ G C ++ +AL + MV G+EP++ IY+ IDG K
Sbjct: 140 -GKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198
Query: 471 EGNVEMATMLRKEMFENQVRQE 492
V+ A L M + +R +
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPD 220
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 124/242 (51%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ V T+ L+ G KVE V EM D Y Y+ ++ +C +R A
Sbjct: 198 IEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRAS 257
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++++E +E + Y +I GFC+IG+M AE +M GV + + F +++GY
Sbjct: 258 EVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGY 317
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G VD+A+ V M + G E + T L LC R+ EA +L + K G+ P
Sbjct: 318 CRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEK-GVPPN 376
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI C+EG M EA ++ EM GKG PS+ Y+ +DGY+K+G++ A RK
Sbjct: 377 YVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRK 436
Query: 483 EM 484
EM
Sbjct: 437 EM 438
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 20/334 (5%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
+ +L+ +I K+E VD ++ ++ ++ V A+I R V E++
Sbjct: 204 TYTILVDSLSTAGDISKVEAVVDEMK---AKNVAGDVYLYTAVINAYCRAGNVRRASEVF 260
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
E G + PN T+ L+ GF + G E E + +M G
Sbjct: 261 DECVGNG----------------IEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVG 304
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
+ ++ ++ +C + + A K+ M +E DV YNT+ G C + MA A+
Sbjct: 305 HNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTL 364
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
M GV + VT+ L++ +C+ GD+ A ++ +M KG P T V++
Sbjct: 365 LHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIK 424
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
K + EA + + + K GL P +Y L+ G C GK++ ALK+ EM +G EP++
Sbjct: 425 KGSIREA-ERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVV 483
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
Y+A I G KEG E A L +M + + +D
Sbjct: 484 AYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDD 517
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 118/241 (48%), Gaps = 9/241 (3%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
FN ++ G+ R+G + V M ++G E D Y+Y+ L C RM EA+ L M
Sbjct: 310 FNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMI 369
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+K V + V Y T+I C+ G+M A FREM G S VT+ +++GY + G +
Sbjct: 370 EKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIR 429
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A +M +KG P+ T L+ C +V AL + + + G P +Y L
Sbjct: 430 EAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFE-EMKHRGTEPNVVAYTAL 488
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I GL +EG+ EEA ++ +M+ G P +YSA + G + N RK++ Q+
Sbjct: 489 ISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV-GSLHTDN-------RKDIHHKQI 540
Query: 490 R 490
+
Sbjct: 541 K 541
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 1/188 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V+T+N L G R + + + M G P+ +Y+ L+++ C+E M EA +L+
Sbjct: 341 DVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLF 400
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM K VV YN ++ G+ + G + AE F +EM G+ T+ LV+G+C
Sbjct: 401 REMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVN 460
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G VD A+ ++ +M +G EP LI L + R EA + ++K GL P +
Sbjct: 461 GKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYD-DMLKAGLTPDDSL 519
Query: 426 YMFLIKGL 433
Y L+ L
Sbjct: 520 YSALVGSL 527
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
SV++ FC+ R+ +A L +EM V + + YN+++ + + AR +E M
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRR 402
G+E++ T+ LV+ AGD+ V ++M K + +I C + RR
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRR 255
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
E D V G+ P E++Y LI G C+ G+ME A + A+M G+G + I++
Sbjct: 256 ASEVFD----ECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFN 311
Query: 463 AFIDGYMKEGNVEMATMLRKEM 484
IDGY ++G V+ A ++ M
Sbjct: 312 TMIDGYCRQGMVDNALKVKAAM 333
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 1/234 (0%)
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
GF + G + + EM R G + Y+ L+ + + ++L E M + +E
Sbjct: 141 GFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGGIEA 200
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
V Y ++ G++++ E EM V + ++N YCRAG+V A V+
Sbjct: 201 TVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVF 260
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
++ G EP T VLI C K EA ++L A + G+ + + +I G C
Sbjct: 261 DECVGNGIEPNERTYGVLINGFC-KIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCR 319
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+G ++ ALKV+A M G E + Y+ G + + A L M E V
Sbjct: 320 QGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGV 373
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN T+ L+ +EG + ++ EMA G P +Y+V+M + ++ +REAE
Sbjct: 373 VPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAE 432
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +EM K + DV Y +++ G C G++ A + F EM G E + V + L++G
Sbjct: 433 RFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGL 492
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL-CDKRR 402
+ G + A +Y+DM + G P+ S L+G L D R+
Sbjct: 493 AKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRK 533
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 12/165 (7%)
Query: 331 GEMARAEEFF-REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G++A A R +G S + +V+G+C++G VD A + ++M R G
Sbjct: 110 GQLADAAAILTRALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALC 169
Query: 390 IEVLIGELC-----DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
L+ C D RV E L+I++ G+ T +Y L+ L G + +
Sbjct: 170 YNSLLD--CYVRRKDDARVQELLEIME----NGGIEATVGTYTILVDSLSTAGDISKVEA 223
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
V EM K + +Y+A I+ Y + GNV A+ + E N +
Sbjct: 224 VVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGI 268
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 145/275 (52%), Gaps = 9/275 (3%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + +++ ++ PN+ TFNAL+ F +EG F + E + +M + +PD
Sbjct: 232 YGRWSDASQLLSDMIEK--KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDI 289
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
++Y+ L+ FC R+ +A++++E M K+ D+ YNT+I GFC+ + E FRE
Sbjct: 290 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 349
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK-- 400
M G+ +VT+ L+ G GD D+A V+ M G P+ T +L+ LC+
Sbjct: 350 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 409
Query: 401 -RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+ E D ++ +K ++ Y +I+G+C+ GK+++ + + KG +P++
Sbjct: 410 LEKALEVFDYMQKSEIKLDIYI----YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 465
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
Y+ I G + ++ A L K+M E+ + G
Sbjct: 466 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 500
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 156/347 (44%), Gaps = 20/347 (5%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
D + LF +VK+ R S F F+ L+ ++K + + + + +M M G +
Sbjct: 24 DDAIGLFGGMVKS-RPLPSI-FEFNKLLSAIAKMKKFDLVISLALLGKM-MKLGYEPSIV 80
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T ++L+ GK + SDA A + + V+ + RP+ TF L+ G
Sbjct: 81 TLSSLLNGYCHGKRI--------------SDAVALVDQMVE--MGYRPDTITFTTLIHGL 124
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ + + M + GC+P+ +Y V++ C+ + A L +M +E DV
Sbjct: 125 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 184
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
V +NTII C+ + A F+EM G+ + VT+ L++ C G A + +D
Sbjct: 185 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 244
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
M K P T LI + + EA + L ++K + P +Y LI G C
Sbjct: 245 MIEKKINPNLVTFNALIDAFVKEGKFVEA-EKLHDDMIKRSIDPDIFTYNSLINGFCMHD 303
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++++A ++ MV K P L+ Y+ I G+ K VE T L +EM
Sbjct: 304 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 350
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 123/272 (45%), Gaps = 24/272 (8%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAG 232
++++ + ++S+ + T N LI + K V G E++RE+ GL D
Sbjct: 303 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV-- 360
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
T+ L+ G + +G + + V+ +M G PD +YS+L+
Sbjct: 361 ----------------TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 404
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C ++ +A ++++ M+ ++ D+ Y T+I G C+ G++ + F + L GV+ +
Sbjct: 405 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 464
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI-GELCDKRRVFEALDILK 411
VT+ +++G C + A + M G P+ T LI L D + A I +
Sbjct: 465 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 524
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
R + F + S + L+ + +G+++++
Sbjct: 525 MRSCR---FVGDASTIGLVANMLHDGRLDKSF 553
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 132/245 (53%), Gaps = 1/245 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN++T+N L+ + R G F+ ++ EM G + SY++L+A C ++++A
Sbjct: 104 VEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAV 163
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+E MR + + +V +N +I G+ + G+MA A FF +M +G+ S VT+ L+ G+
Sbjct: 164 QLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGF 223
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR D+ A+ + DM +G P T +LI + + A +L + + K GL
Sbjct: 224 CRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMML-SEMEKAGLEVD 282
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+SY L+ LC EGKM A K+ M KG +P+ +Y I GY +EG+ A L
Sbjct: 283 VQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIM 342
Query: 483 EMFEN 487
EM +N
Sbjct: 343 EMRKN 347
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 1/226 (0%)
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ G + V+ M RLG P+ +Y+ L+ + L+ EMR VE ++
Sbjct: 50 QSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLY 109
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
YN +IG +C GE A F EM + GV + V++ L+ G CR + A+ ++ M
Sbjct: 110 TYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAM 169
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
R+G P T +LI ++ AL ++ GL P+ +Y LI G C
Sbjct: 170 RREGIRPSIVTFNLLIDGYGKAGKMANALHFFN-QMKAAGLPPSVVTYNELICGFCRVRD 228
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ A++ +M +G P+ Y+ I + KE ++ A M+ EM
Sbjct: 229 IARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEM 274
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 36/223 (16%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N L+ GF R + +++M G P +Y++L+A F +E M A +
Sbjct: 211 PSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMM 270
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM +E DV +Y ++ C G+M A + F+ M L GV+ +SV ++ ++ GY R
Sbjct: 271 LSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGR 330
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G A+ + +M + G P
Sbjct: 331 EGSSYKALRLIMEMRKNGL------------------------------------IPNVA 354
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
SY I+ LC EGK +EA + +M G + S I +D
Sbjct: 355 SYCLTIRLLCNEGKCQEAEALIDDMEHAGLQTSETICRILLDA 397
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 97/197 (49%), Gaps = 1/197 (0%)
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D + + L+ V C+ + EA ++++ M V + V Y +I G+ G F
Sbjct: 37 DVAACTALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALF 96
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
EM GVE + T+ L+ +CR G+ SA L++++M KG + +LI LC
Sbjct: 97 AEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRH 156
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
++ +A+ + +A + + G+ P+ ++ LI G + GKM AL +M G PS+
Sbjct: 157 SKLKDAVQLFEA-MRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVT 215
Query: 461 YSAFIDGYMKEGNVEMA 477
Y+ I G+ + ++ A
Sbjct: 216 YNELICGFCRVRDIARA 232
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Query: 235 KDVKRVVR---------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
+D+ R VR + P T+ L+ F +E ++ + EM + G E D SY
Sbjct: 227 RDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSY 286
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
VL+ C E +M A KL++ M K V+ + V Y+ +I G+ G +A EM
Sbjct: 287 GVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRK 346
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
+G+ + ++ + C G A + +DM G + + +L+
Sbjct: 347 NGLIPNVASYCLTIRLLCNEGKCQEAEALIDDMEHAGLQTSETICRILL 395
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/468 (24%), Positives = 215/468 (45%), Gaps = 34/468 (7%)
Query: 24 SQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKN 83
S ++T++S PPS T L + ++ S+W H + LTP+ S L
Sbjct: 23 SLYTTTTSAPPSPP-----ITETKFLEYIQT-SQW-HFIKHLAPNLTPSLLSSTLPTLHQ 75
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL 143
NP L S C L++ + IL R P+ +++ L + P +
Sbjct: 76 NPILVETLLSHLHRHPHCL-DLNTRCITLCILYRLPSPKPSFHILQPILHT--TTPTVIF 132
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
E+ + R VFDLL+ + + ++ C+++++ + K TCN+L+
Sbjct: 133 NELSLARNRLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMK---ENEIIPKTETCNSLL 189
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
+ + + + +Y E+ ++ ++ ++ TFN ++ REG +
Sbjct: 190 SLLLKLNKIKMAWFVYEEMVKMN----------------IKSSIVTFNIMINILCREGKW 233
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
+K +D M G +P+ +Y+ ++ +C + A K+++ M+DKN++ D YN+
Sbjct: 234 KKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSF 293
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I C+ + A ++ SG+ ++VT+ L++G C GD+D A ++M +G
Sbjct: 294 ISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGI 353
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
T +LI L ++R+ EA D++K K G+ P +Y I G C G ++AL
Sbjct: 354 VASVFTYNLLIHALFLEKRIEEAEDMIKEMREK-GVEPDVVTYNIQINGYCRCGNAKKAL 412
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
+ EMV K P++E Y++ ID + K + A +E F+ +++
Sbjct: 413 SLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEA----EEKFKKSIKE 456
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 155/322 (48%), Gaps = 23/322 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+IE ++ L+ GL T NALI + KG + YR D GI
Sbjct: 302 RIEEASGVLCKLLESGLVPNAVTYNALI-DGCCNKGDLDKAFAYR-----DEMMNRGIVA 355
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+V T+N L+ + E E+ ED+ EM G EPD +Y++ + +C
Sbjct: 356 ----------SVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRC 405
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
++A L++EM +KN+ V Y ++I F + M+ AEE F++ G+ + F
Sbjct: 406 GNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMF 465
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA---LDILKA 412
L++G+C G++D A + +M P+ T L+ C +R+V EA LD +K
Sbjct: 466 NALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKE 525
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
R G+ P SY LI G + G M++AL+V EM+ GF+P+L Y+A I GY K G
Sbjct: 526 R----GIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIG 581
Query: 473 NVEMATMLRKEMFENQVRQEDG 494
+ A L +EM + +D
Sbjct: 582 EADHAEELLREMQSKGITPDDS 603
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 147/317 (46%), Gaps = 22/317 (6%)
Query: 153 ECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
E G P ++ LI C +++K D +M+RG+ V T N LI + K
Sbjct: 315 ESGLVPNAVTYNALIDGCCNKGDLDKAFAYRD---EMMNRGIVASVFTYNLLIHALFLEK 371
Query: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
+ ++ +E+ R V P+V T+N + G+ R G +K ++
Sbjct: 372 RIEEAEDMIKEM----------------REKGVEPDVVTYNIQINGYCRCGNAKKALSLF 415
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
EM P +Y+ L+ VF + RM EAE+ +++ + + D++ +N +I G C
Sbjct: 416 DEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVN 475
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G + RA + +EM + V VTF L+ GYCR V+ A + ++M +G +P+ +
Sbjct: 476 GNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISY 535
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
LI + + +AL++ ++ G PT +Y LI+G + G+ + A ++ EM
Sbjct: 536 NTLISGYSKRGDMKDALEVFD-EMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQ 594
Query: 451 GKGFEPSLEIYSAFIDG 467
KG P Y I+
Sbjct: 595 SKGITPDDSTYLYVIEA 611
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 1/189 (0%)
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++EEM N++ +V +N +I C G+ +A++F M + GV+ + VT+ ++NGYC
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G ++A ++ M K +P+ T I LC +RR+ EA +L ++++ GL P
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVL-CKLLESGLVPNA 322
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI G C +G +++A + EM+ +G S+ Y+ I E +E A + KE
Sbjct: 323 VTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKE 382
Query: 484 MFENQVRQE 492
M E V +
Sbjct: 383 MREKGVEPD 391
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 150/331 (45%), Gaps = 32/331 (9%)
Query: 61 LLSLCRSGLTPTQFSQIAL--GLKNNPHL--ALRFFSFTQHKSLCKHSLSSYATIIHILS 116
L L SGL P + AL G N L A + ++ + S+ +Y +IH L
Sbjct: 310 LCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVA-SVFTYNLLIHALF 368
Query: 117 RARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP---FVFDLLIKCCLEVKN 173
+ I A D+I+ +R +P + + + + Y CG+A +FD +++ KN
Sbjct: 369 LEKRIEEAEDMIK-EMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVE-----KN 422
Query: 174 IE-KIETCVDIVRMLMSRGL------SVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
I +ET ++ + R K S ++ ++ +I G+ + +
Sbjct: 423 IRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNI---- 478
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
D + K++ +V P+ TFN LM G+ RE E+ + + EM G +PD SY+
Sbjct: 479 -DRAFQLLKEMDNA-KVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYN 536
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L++ + + M++A ++++EM + ++ YN +I G+ +IGE AEE REM
Sbjct: 537 TLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSK 596
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
G+ T+ +++ D LV ND
Sbjct: 597 GITPDDSTYLYVIEAMKTNDD-----LVEND 622
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 127/248 (51%), Gaps = 1/248 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ PNV F+ ++ +EG DV M + G EPD +Y+ LM C M EA
Sbjct: 703 KIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEA 762
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+++ M K +V +YN +I G+C+I M +A +M L G+ + +VT+ L++G
Sbjct: 763 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 822
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C G + AI ++++M G P+ T +L+ LC + EA+ +LKA + L
Sbjct: 823 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA-IEGSNLDA 881
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y I G+C G++E A + + + KG +P + Y+ I G K G ++ A L
Sbjct: 882 DILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLF 941
Query: 482 KEMFENQV 489
++M EN +
Sbjct: 942 RKMDENDI 949
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 216/471 (45%), Gaps = 57/471 (12%)
Query: 33 PPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS----GLTPTQFSQIALGLKNNPHLA 88
PPS N + T ++ HH + LLSL R G+ P ++ +A+ + + HL
Sbjct: 42 PPSTVDFNRLLTSIAKTKHHST------LLSLSRQMDSFGIPPDVYT-LAIVINSLCHLN 94
Query: 89 LRFFSFTQHKSLCK----HSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF 144
F+F+ + K +++ T+I L IG A L LF
Sbjct: 95 RVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEA----------------LHLF 138
Query: 145 EVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
+ ++ G P V + LI + + + + +I ++++G+S + T N+L
Sbjct: 139 DKMIGE----GFQPNVVTYGTLINGLCKDRQVTE---AFNIFSEMITKGISPNIVTYNSL 191
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
I G+ E ++ V L ++ ++ P+V T N ++ +EG
Sbjct: 192 I------HGLCKLCE-WKHVTTLMNEMVDS---------KIMPDVFTLNTVVDALCKEGM 235
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
+ DV M G EP+ +Y+ LM C + A K+++ M K+ +V++YNT
Sbjct: 236 VAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNT 295
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G+C+I + +A F EM + ++VT+ L++G C G + AI ++++M +G
Sbjct: 296 LINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 355
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
P+ T L LC R + +A+ +LKA + P + Y ++ G+C G++E+A
Sbjct: 356 QIPDLVTYRTLSDYLCKNRHLDKAMALLKA-IEGSNWDPDIQIYTTILDGMCRAGELEDA 414
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+ + + KG +P++ Y+ I G K+G + A+ L EM +N D
Sbjct: 415 RDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 465
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 14/241 (5%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+V T+ LM G + M G PD ++Y+ L+ C +
Sbjct: 648 QPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCNLCEWKHVTT 694
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L EM + + +VV ++T++ C+ G +A A + M GVE VT+ L++G+C
Sbjct: 695 LLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHC 754
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
++D A+ V++ M KG P + +LI C +R+ +A+ +L+ ++ GL
Sbjct: 755 LRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ-GLIADT 813
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI GLC G+++ A+ + EMV G P L Y +D K ++ A +L K
Sbjct: 814 VTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA 873
Query: 484 M 484
+
Sbjct: 874 I 874
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 5/245 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N+L+ ++ V + EM P+ +S ++ C+E + A
Sbjct: 669 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 728
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M + VE DVV Y ++ G C EM A + F M G + ++ L+NGY
Sbjct: 729 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 788
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ +D A+ + M +G + T LI LC R+ A+ + +V G P
Sbjct: 789 CQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH-EMVASGQIPD 847
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ LC+ + EA+ + + G + + +Y+ IDG + G +E A +
Sbjct: 848 LVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAA----R 903
Query: 483 EMFEN 487
++F N
Sbjct: 904 DLFSN 908
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 23/262 (8%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ F L+ + + V + +M G PD Y+ ++L+ FC RR+ A +
Sbjct: 579 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 638
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCE----------------------IGEMARAEEFFRE 342
++ + DVV Y T++ G C+ + E E
Sbjct: 639 LAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNE 698
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M S + + V F +V+ C+ G + A V + M ++G EP+ T L+ C +
Sbjct: 699 MVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE 758
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ EA+ + V K G P +SY LI G C+ +M++A+ + +M +G Y+
Sbjct: 759 MDEAVKVFDTMVHK-GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYN 817
Query: 463 AFIDGYMKEGNVEMATMLRKEM 484
I G G ++ A L EM
Sbjct: 818 TLIHGLCHVGRLQHAIALFHEM 839
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 123/288 (42%), Gaps = 33/288 (11%)
Query: 182 DIVRMLMSRGLSVKVSTCNAL-------------------------IWEVSRGKGVISGY 216
D+V M++ RG+ V T NAL + V +I+GY
Sbjct: 241 DVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGY 300
Query: 217 EIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+ V D + +++ R + PN T+N L+ G G + ++ EM
Sbjct: 301 CKIQSV-----DKAMYLFEEMSRQ-ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVAR 354
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G PD +Y L C+ R + +A L + + N + D+ Y TI+ G C GE+ A
Sbjct: 355 GQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDA 414
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ F + G++ + T+ +++G C+ G + A ++++M + G P T ++
Sbjct: 415 RDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRG 474
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
+++L+ + + F + S L+ G+ + +++++K
Sbjct: 475 FLRNNEALRTIELLEEMLARG--FSVDVSTTTLLVGMLSDDGLDQSVK 520
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 110/287 (38%), Gaps = 90/287 (31%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
D+V M++ RG+ V T AL
Sbjct: 729 DVVDMMIKRGVEPDVVTYTAL--------------------------------------- 749
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
M G ++ V+ M GC P+ SY++L+ +C+ +RM +A
Sbjct: 750 ------------MDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKA 797
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L E+M + + D V YNT+I G C +G + A F EM SG VT+ L++
Sbjct: 798 MGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 857
Query: 362 YCR---------------AGDVDSAILVYN----DMCRKGFEPEGSTIEVLIGELCDKRR 402
C+ ++D+ ILVYN MCR GEL R
Sbjct: 858 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA-------------GELEAARD 904
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
+F L GL P ++Y +I GLC+ G ++EA K+ +M
Sbjct: 905 LFSNLS-------SKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 1/195 (0%)
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ EA + M K V +N ++ + + R+M G+ T
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
++N C VD A + + G +P+ +T LI LC + ++ EAL + +++
Sbjct: 86 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFD-KMIGE 144
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P +Y LI GLC++ ++ EA + +EM+ KG P++ Y++ I G K +
Sbjct: 145 GFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHV 204
Query: 478 TMLRKEMFENQVRQE 492
T L EM ++++ +
Sbjct: 205 TTLMNEMVDSKIMPD 219
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 118/325 (36%), Gaps = 68/325 (20%)
Query: 217 EIYREVFGLDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVW 270
+IY + LD AG +D + + ++PNV T+N ++ G ++G + ++
Sbjct: 396 QIYTTI--LDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLF 453
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
EM + GC P+ +Y+++ F +L EEM + DV ++G +
Sbjct: 454 SEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDD 513
Query: 331 G----------------------------------------------EMARAEEFFREMG 344
G + A F M
Sbjct: 514 GLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRML 573
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
S+V F L+ + + + + M G P+ T+ +LI C RR+
Sbjct: 574 HMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLG 633
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
A +L A+++K G P +Y L+ GLC +M+ KG P + Y++
Sbjct: 634 YAFSVL-AKLLKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYNSL 679
Query: 465 IDGYMKEGNVEMATMLRKEMFENQV 489
I + T L EM +++
Sbjct: 680 IHALCNLCEWKHVTTLLNEMVNSKI 704
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 35/141 (24%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA------- 301
T+N L+ G G + ++ EM G PD +Y +L+ C+ + EA
Sbjct: 815 TYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAI 874
Query: 302 ----------------------------EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
L+ + K ++ DV YN +I G C+ G +
Sbjct: 875 EGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLL 934
Query: 334 ARAEEFFREMGLSGVESSSVT 354
A + FR+M + + S+S +
Sbjct: 935 DEANKLFRKMDENDIWSNSTS 955
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 190/429 (44%), Gaps = 29/429 (6%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI 128
L ++ +I LKN P+LA FF+ + +H++ +YA +I +L R RL + ++
Sbjct: 61 LNTSRVVEIFYNLKNEPNLAWSFFTQLKESGF-QHNVDTYAALIRVLCRWRLERKLQSLL 119
Query: 129 RVALRSPENDPKLK---LFEVL-----VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETC 180
+ S E+ LF+VL V D+L+K + V ++
Sbjct: 120 SEIVGSKESVLGFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDE---A 176
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
+D + RG + +CN L+ + + IYR + KR+
Sbjct: 177 IDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHL---------------KRL 221
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ PN +T+ + R+G FE+ DV+ EM G P+ + S + C +R
Sbjct: 222 -GLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDL 280
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ +R N D AY +I GFC ++ AE+ F +M G+ + L++
Sbjct: 281 GYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIH 340
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
YC+AG++ A+ ++NDM G + + ++ LC+ E +D K G+F
Sbjct: 341 AYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFK-EFRDSGIF 399
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
E Y ++ LC+ GK+EEA+++ EM G+ + Y+ I GY +G + A +
Sbjct: 400 LDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNM 459
Query: 481 RKEMFENQV 489
+EM E +
Sbjct: 460 FEEMKERGI 468
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 118/240 (49%), Gaps = 5/240 (2%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N ++ + G E+ ++ EM D Y+ L+A +C + ++ +A+ ++EEM+
Sbjct: 405 YNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMK 464
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
++ +E D+V YN ++GGF G A E +G G++ +S T ++ G C AG V
Sbjct: 465 ERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVK 524
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A N + K E ++ C +A ++ +R+ K G+ +KS L
Sbjct: 525 EAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELF-SRLSKQGILVKKKSCFKL 579
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ LC EG+ ++AL + M+ EP+ +Y I + ++G+++ A ++ + E +
Sbjct: 580 LSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGI 639
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 14/252 (5%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ ++A++ G+ + K +++ +++ G S L++ C E +A L E
Sbjct: 538 LENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLE 597
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M +VE + + Y +IG FC G+M RA+ F + G+ +T+ ++NGYCR
Sbjct: 598 RMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVN 657
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLI-GELCDKRRVFEALDILK-------------A 412
+ A ++NDM +G +P+ T V++ G ++ +L K +
Sbjct: 658 CLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWS 717
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ + G+ P Y LI C+ +++A+ + EM+ +G +P + Y+A + G
Sbjct: 718 EMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRG 777
Query: 473 NVEMATMLRKEM 484
+++ A L EM
Sbjct: 778 DMDRAITLVNEM 789
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 122/251 (48%), Gaps = 5/251 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ +V + L+ G+ +G ++++ EM G EPD +Y++L+ F +EA
Sbjct: 432 RMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEA 491
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L + + + ++ + +N II G C G++ AE F + +E+ S +V+G
Sbjct: 492 LELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSA----MVDG 547
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC+A A +++ + ++G + + L+ LC + +AL IL R++ + P
Sbjct: 548 YCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKAL-ILLERMLALDVEP 606
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ Y LI C +G M+ A V +V +G P + Y+ I+GY + + A +
Sbjct: 607 NQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIF 666
Query: 482 KEMFENQVRQE 492
+M E ++ +
Sbjct: 667 NDMKERGIKPD 677
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM------------- 289
+ P+V T+ ++ G+ R + D++ +M G +PD +Y+V++
Sbjct: 639 ITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARS 698
Query: 290 ---AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
+ EE +M +A W EM++ ++ DVV Y +I C+ + A + EM
Sbjct: 699 LQFSKGSEEEKM-DASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIAR 757
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G++ VT+ L++ C GD+D AI + N+M KG EP+ + VL
Sbjct: 758 GLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVL------------H 805
Query: 407 LDILKARVVKF 417
ILKAR V+F
Sbjct: 806 RGILKARKVQF 816
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 107/213 (50%), Gaps = 16/213 (7%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN + L+ F R+G ++ + V+ + G PD +Y++++ +C +REA
Sbjct: 604 VEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREAR 663
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIG-EMAR--------------AEEFFREMGLSG 347
++ +M+++ ++ DV+ Y ++ G ++ +MAR A F+ EM G
Sbjct: 664 DIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMG 723
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
++ V + L++ +C+ ++ AI +Y++M +G +P+ T L+ C + + A+
Sbjct: 724 IKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAI 783
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
++ K G+ P ++ L +G+ + K++
Sbjct: 784 TLVNEMSFK-GIEPDSRAMSVLHRGILKARKVQ 815
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L+ EG ++K + M L EP+ Y L+ FC + M+ A+ +++ + ++
Sbjct: 579 LLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERG 638
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG------ 366
+ DV+ Y +I G+C + + A + F +M G++ +T+ +++G+ +
Sbjct: 639 ITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARS 698
Query: 367 ----------DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
+D++ +++M G +P+ VLI C + +A+++ + +
Sbjct: 699 LQFSKGSEEEKMDASPF-WSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIAR 757
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
GL P +Y L+ C G M+ A+ + EM KG EP S G +K V+
Sbjct: 758 -GLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARKVQ 815
>gi|297805650|ref|XP_002870709.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316545|gb|EFH46968.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 608
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 225/484 (46%), Gaps = 42/484 (8%)
Query: 18 PKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTP----TQ 73
PKP L ++ P Q+ N I V+ +HR S L L P +
Sbjct: 24 PKPILNPLYNLL----PQTQNPNKIVDVICSTLNHRDHSVLLPNLRDEVKSLIPHLGYPE 79
Query: 74 FSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPAR----DVIR 129
S++ L +++ AL FF + + + ++ +Y ++HIL+ ++ A ++I
Sbjct: 80 ISRVLLRFQSDASRALTFFKWVKFDLGKRPNVGNYCLLLHILASSKKFPLAMQFLCELIE 139
Query: 130 VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMS 189
+ + E D +F VLV EC P VFD+L+K L+ + +E R ++
Sbjct: 140 LTSKKEEED----VFSVLVSASDECNWDPVVFDMLVKGYLK---LGLVEDGFSTFRKVID 192
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
G V V TCN L+ + + + +++Y +V V + PN +T
Sbjct: 193 SGFRVSVVTCNHLLNGLLKLDLMEDCWQVY----------------NVMCRVGIHPNTYT 236
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
FN L F + +V+D +M G EPD +Y+ L++ +C R++EA L++ M
Sbjct: 237 FNILTNVFCNNSNYGEVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMY 296
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ V D+V Y ++I G C+ G + A + F M G++ +++ L+ YC+ G +
Sbjct: 297 RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQ 356
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD-ILKARVVKFGLFPTEKSYMF 428
+ + ++M P+ T +V++ + R+ A++ +++ R +K + P E F
Sbjct: 357 QSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLAAVNFVVELRRLKV-IIPIEVC-DF 414
Query: 429 LIKGLCEEGKMEEALKVQAEMVGK--GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM-F 485
LIK LC+EGK A K E + K G E E Y+ I+ +E A +L+ ++
Sbjct: 415 LIKSLCQEGK-PFAAKHLLERISKEEGHEAKPETYNNLIESLCCCDAIEEALVLKGKLKN 473
Query: 486 ENQV 489
+NQV
Sbjct: 474 QNQV 477
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 4/152 (2%)
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+Y+ L+ C + EA L +++++N DV Y +IG C IG AE EM
Sbjct: 447 TYNNLIESLCCCDAIEEALVLKGKLKNQNQVLDVKTYRALIGCLCRIGRNREAESLMAEM 506
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSA--ILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
S V+ S+ LVN YC+ D D A +L + M + F + + L+ LC+
Sbjct: 507 LDSEVKPDSIICGALVNRYCKELDFDKAESLLSFFAMEFRIF--DTLSYNSLVNALCETG 564
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
++ + L+ R+ + G P + +LI+ L
Sbjct: 565 SGYDKVLDLQERMQRLGFVPNSLTCKYLIQVL 596
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 132/282 (46%), Gaps = 34/282 (12%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ PNV +FN ++ + G ++ +V+ EMA CEPD ++Y LM C+E R+ E
Sbjct: 166 TNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDE 225
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L +EM+ + V +N +I G C+ G+M R + M L G + VT+ ++N
Sbjct: 226 AVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIIN 285
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA-------- 412
G C G +D A+ + + M P T LI L + R + + +L +
Sbjct: 286 GLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHA 345
Query: 413 -----RVVKFGLFPTEKS---------------------YMFLIKGLCEEGKMEEALKVQ 446
+ GLF EKS Y LI GLC EGK++EA ++
Sbjct: 346 NEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEIL 405
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
EMV KG P+ YS+ I G+ K GN + A + KEM +N
Sbjct: 406 CEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNN 447
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N ++ G +G +K + M C P+ +Y L+ ++ R + L
Sbjct: 275 PNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHL 334
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ ++ + AY+T+I G + + A +++M G + + V + L++G CR
Sbjct: 335 LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCR 394
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +D A + +M KG P T LI +A+ + K + K P E
Sbjct: 395 EGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWK-EMAKNNCVPNEI 453
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI GLCE+GK+ EA+ + M+G+G P + YS+ I G G+VE+ L EM
Sbjct: 454 CYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEM 513
Query: 485 F 485
Sbjct: 514 L 514
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN+ ++AL+ G REG ++ +++ EM GC P+ ++YS L+ F + ++A +
Sbjct: 379 QPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIR 438
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+W+EM N + + Y+ +I G CE G++ A + M G+ V + +++G C
Sbjct: 439 VWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLC 498
Query: 364 RAGDVDSAILVYNDM-CRKG-FEPEGSTIEVLIGELCDKRRVFEALDILKA 412
AG V+ + ++N+M C++ +P+ T +L+ LC + + A+D+L +
Sbjct: 499 NAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNS 549
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 112/229 (48%), Gaps = 1/229 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N + ++ L+ G ++E E+ +W +M GC+P+ YS L+ C E ++ EA+++
Sbjct: 346 NEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEIL 405
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM +K + Y+++I GF + G +A ++EM + + + + L++G C
Sbjct: 406 CEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCED 465
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK-FGLFPTEK 424
G + A++++ M +G P+ +I LC+ V L + + + P
Sbjct: 466 GKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVV 525
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+Y L++ LC++ + A+ + M+ +G P L + F++ ++ N
Sbjct: 526 TYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLN 574
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 3/197 (1%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWE--EMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
C S++ ++ V +E A + +E N+ +V+++N +I C++G + R
Sbjct: 131 CRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDR 190
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A E FREM + E T+ L++G C+ +D A+L+ ++M +G P T VLI
Sbjct: 191 AIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLIN 250
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
LC K + ++ +K G P E +Y +I GLC +GK+++A+ + MV
Sbjct: 251 GLCKKGDMVRVTKLVDNMFLK-GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCV 309
Query: 456 PSLEIYSAFIDGYMKEG 472
P+ Y I+G +K+G
Sbjct: 310 PNDVTYGTLINGLVKQG 326
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 19/293 (6%)
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
R K +S YE D+ I K ++ + TF +L+ + G F +
Sbjct: 32 RSKTTLSPYES-------DAPIPDQIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLF 84
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK---LWEEMRDK-NVEHDVVAYNTI 323
V+ M R E + + VF + EK L+ M D+ V ++N++
Sbjct: 85 QVFDRMKR---ERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSV 141
Query: 324 IGGFCEIGEMARAEEFFREMGLSG---VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
+ + G RA EF+ E G+ G + + ++F ++ C+ G VD AI V+ +M
Sbjct: 142 LNVIIQEGLFHRALEFY-ECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAI 200
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
+ EP+ T L+ LC + R+ EA+ +L ++ G FP+ ++ LI GLC++G M
Sbjct: 201 QKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIE-GCFPSSVTFNVLINGLCKKGDMV 259
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
K+ M KG P+ Y+ I+G +G ++ A L M ++ D
Sbjct: 260 RVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPND 312
>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 203/471 (43%), Gaps = 63/471 (13%)
Query: 55 KSRWNHLL------SLCRSGLTPTQFSQIAL-GLKNNPHLALRFFSFTQHKSLCKHSLSS 107
K W ++L L +S +T S+++L P L+ FF +T KHSL S
Sbjct: 23 KGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYGGPSLSWSFFIWTDSLPSSKHSLQS 82
Query: 108 YATIIHILSRARLIGPARDVI-RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+I IL++ + A ++ ++A R + P L L ++ + VF L+
Sbjct: 83 SWKMILILTKHKHFKTAHQLLDKLAQRELLSSP-LVLRSLVGGVSEDPEDVSHVFSWLM- 140
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
+ I + + + S GL + C L+ + + + + ++I++++ L
Sbjct: 141 --IYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLG 198
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
V N+H +N L+ + G EK E + EM G PD ++Y+
Sbjct: 199 ----------------VVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYN 242
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L++V+C++ EA + + M V ++V YN+ I GF G M A FRE+
Sbjct: 243 TLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-D 301
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
V ++ VT+ L++GYCR D+D A+ + M +GF P T ++ +LC+ R+ EA
Sbjct: 302 DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREA 361
Query: 407 LDIL----------------------------------KARVVKFGLFPTEKSYMFLIKG 432
+L K ++++ GL SY LI G
Sbjct: 362 NRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHG 421
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
C+ ++E A + M+ KGF P YS +DG+ + + T L +E
Sbjct: 422 FCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 2/246 (0%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
H F+ LM+ + + G V+ ++ G +P + +VL+ ++R K++++
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M V ++ YN ++ + G+ +AE+ EM GV T+ L++ YC+
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
A+ V + M R G P T I + R+ EA + R +K + +Y
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF--REIKDDVTANHVTYT 311
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
LI G C ++EAL+++ M +GF P + Y++ + ++G + A L EM
Sbjct: 312 TLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK 371
Query: 488 QVRQED 493
++ ++
Sbjct: 372 KIEPDN 377
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 202/427 (47%), Gaps = 43/427 (10%)
Query: 88 ALRFFSFTQHKSLCKHS-LSSYATIIHILSRARLIGPARDVIRVALR------SPEN--- 137
A R F + L K + L S++ +IH+L+ A AR +I+ + P N
Sbjct: 91 AFRLFETSSISRLSKTTDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLRRYSEPTNISH 150
Query: 138 ----------DPKLKL--FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVR 185
PK + F +L+ + E G +F+ + E++ + C+ I+
Sbjct: 151 RLFNALEDIQSPKFSIGVFSLLIMEFLEMG----LFEDALWVSREMRCSPDSKACLAILN 206
Query: 186 MLMSRGL--SVKVSTCNALIWEVSRGKGVISGYEIYREVF------GLDSDATAGIGKDV 237
L+ R SV V +++ +G++ IY +F G S + D
Sbjct: 207 GLVRRRRFDSVWVD------YQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLL--DE 258
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
+ V+PNV+ + + RE E+ E ++ M G P+ Y+YS ++ +C+
Sbjct: 259 MTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGN 318
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+R+A L++E+ + +VV + T++ GFC+ E+ A F M GV+ + +
Sbjct: 319 LRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNC 378
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++G C++G++ A+ + ++M P+ T +LI LC + R+ EA + L R+
Sbjct: 379 LIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEA-NRLFQRMKNE 437
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+FP+ +Y LI G C+E +E+AL + +EM G EP++ +S IDGY K N++ A
Sbjct: 438 RIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAA 497
Query: 478 TMLRKEM 484
L EM
Sbjct: 498 MGLYFEM 504
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 140/303 (46%), Gaps = 17/303 (5%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
K+E + ++ G+ + T +A+I + + Y +Y+E+
Sbjct: 282 NKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEIL----------- 330
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
V + PNV F L+ GF + ++V M + G +P+ Y Y+ L+ C+
Sbjct: 331 -----VAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCK 385
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
M EA L EM N+ DV Y +I G C +A A F+ M + SSVT
Sbjct: 386 SGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVT 445
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L++G+C+ +++ A+ + ++M G EP T LI C R + A+ +
Sbjct: 446 YNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMT 505
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+K G+ P +Y LI +E M+EAL++ ++M+ G P+ ++ +DG+ KEG +
Sbjct: 506 IK-GIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL 564
Query: 475 EMA 477
A
Sbjct: 565 SDA 567
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 116/206 (56%), Gaps = 1/206 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN++ +N L+ G + G + + EM L PD ++Y++L+ C E R+ EA
Sbjct: 369 VDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEAN 428
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L++ M+++ + V YN++I GFC+ + +A + EM SGVE + +TF L++GY
Sbjct: 429 RLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGY 488
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ ++ +A+ +Y +M KG P+ T LI + + EAL L + +++ G+ P
Sbjct: 489 CKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALR-LYSDMLEAGIHPN 547
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAE 448
+ ++ L+ G +EG++ +A+ E
Sbjct: 548 DHTFACLVDGFWKEGRLSDAIDFYLE 573
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 94/219 (42%), Gaps = 24/219 (10%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
IE +D+ + S G+ + T + LI + + + + +Y E+
Sbjct: 458 NIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEM------------- 504
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+K +V P+V T+ L+ ++E ++ ++ +M G P+ ++++ L+ F +E
Sbjct: 505 TIKGIV---PDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKE 561
Query: 296 RRMREAEKLWEEMRDKNVEHDVV--------AYNTIIGGFCEIGEMARAEEFFREMGLSG 347
R+ +A + E +V + +I G C+ G + RA FF +M G
Sbjct: 562 GRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGG 621
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
V ++ ++ + R + ++++ DM + G P
Sbjct: 622 VTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPN 660
>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 208/457 (45%), Gaps = 30/457 (6%)
Query: 55 KSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHI 114
+ RWN L + LT S++ +N P L L F+++ K HSL ++IH+
Sbjct: 67 QRRWN-FLEKNLASLTNALVSRVVCEFRNTPQLVLEFYNWVGEKKSVLHSLEISCSVIHV 125
Query: 115 LSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNI 174
L +R A ++ + P L++ E L +Y C S VFD L++ C ++
Sbjct: 126 LVNSRRYDDALSLMGNLMTVNGLSP-LEVLEALNNSYGICESNHAVFDALVRACTQIG-- 182
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATA- 231
+ C ++++ L G V + N + + + + + +Y+E+ +G +
Sbjct: 183 ATVGAC-EVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTF 241
Query: 232 -----GIGKDVK---------RVVR--VRPNVHTFNALMVGFYREG----AFEKVEDVWV 271
+ KD K R+++ + PNV TFN ++ G + G A + V + +
Sbjct: 242 NVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEI 301
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
M+ +P+ +Y+ L+ FC+ + AE+L EM ++E +V Y T+I G+ G
Sbjct: 302 -MSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAG 360
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A EM G+ +SV + +++ GDVD A LV+ DM K + T
Sbjct: 361 CLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCS 420
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+L LC + AL L +V++ L S+ LI LC+ A ++ A M
Sbjct: 421 ILTRGLCRNGYITTALKFLN-QVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYV 479
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+G P + + IDG+ KEGN+E A + +M + +
Sbjct: 480 RGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGE 516
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 8/243 (3%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +N++M Y EG + V+ +M+ D ++ S+L C + A K
Sbjct: 379 PNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKF 438
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ + N+ D ++N +I C+ A A + M + G+ VTF L++G+C+
Sbjct: 439 LNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCK 498
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA---LDILKARVVKFGLFP 421
G+++SA+ VY+ M + +P +I LC V A +D+L+ + GL
Sbjct: 499 EGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQ----RMGLVD 554
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
T +Y LI G GK ++A K+ M G S Y+ I K G V+ A L
Sbjct: 555 T-ITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELM 613
Query: 482 KEM 484
M
Sbjct: 614 TMM 616
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 116/246 (47%), Gaps = 39/246 (15%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+H +N + + + V+ EM G + +++V++ C++ +++EA ++
Sbjct: 203 IHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFY 262
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL---SGVESSSVTFEHLVNGYC 363
+ + +VV +N ++ G C++G+M A + R+M + ++ +SVT+ L++G+C
Sbjct: 263 RILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFC 322
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G + A + N+M + EP
Sbjct: 323 KIGGITVAEELRNEMMKIDIEP------------------------------------NV 346
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++Y +I+G G +EEAL++ EMV +G P+ +Y++ + EG+V+ A+++ +
Sbjct: 347 RTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTD 406
Query: 484 MFENQV 489
M + Q+
Sbjct: 407 MSDKQI 412
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TF L+ G +EG E V+ +M + +P+ Y+ ++ C++ + A L
Sbjct: 484 PDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSL 543
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ ++ + D + YNT+I G+ G+ +A + M +G+ +SS T+ ++ C+
Sbjct: 544 VDVLQRMGLV-DTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCK 602
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVL---IGELCDKRRVFEALDILKARVVKFGLFP 421
G V A + M G P+ T L I + C V E D + + G+ P
Sbjct: 603 FGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLK----GVVP 658
Query: 422 TEKSYMFLIKGLCEE 436
+ +Y ++ L +E
Sbjct: 659 DKLTYENIVSPLLQE 673
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN+ +N+++ G ++G + + + R+G D +Y+ L+ + + +A K
Sbjct: 518 KPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGL-VDTITYNTLINGYFNCGKFDKAFK 576
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L M++ + YNT+I C+ G + A+E M L GV ++T+ LV
Sbjct: 577 LSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININ 636
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+ + I +++ M KG P+ T E ++ L
Sbjct: 637 KNCSAEEVIELHDYMVLKGVVPDKLTYENIVSPL 670
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 215/494 (43%), Gaps = 105/494 (21%)
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVK 149
FF ++ K L SY+ + L + LI A +++ L++ + P L++ + LV+
Sbjct: 105 NFFYWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRK--PPLEILDSLVR 162
Query: 150 TYRECGSAPF-VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
YRE G + VFD+ I + + + + + +S G + CN L+ ++ +
Sbjct: 163 CYREFGGSNLTVFDIFID---KFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLK 219
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRV------------------------R 244
+ ++ +V+G S A I DV V +
Sbjct: 220 ANMM----GLFWKVYG--SMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECK 273
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+NA + G + GA ++ +V M G PD ++Y++L+ FC+++R +EA+ +
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333
Query: 305 WEEM--------------------RDKNVEH---------------DVVAYNTIIGGFCE 329
+E M ++ N+E +VV YN +IGG +
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
GEMA+A F EM ++G+E + T+ L++GY ++ D+ A + +M + P T
Sbjct: 394 AGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT 453
Query: 390 IEVLIGELC---DKRRVFEALD----------------ILKARV---------------V 415
VLI LC D ++ E LD ++KA V +
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMI 513
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G+ P Y LI GLC K+EEA + +M KG +P+ Y AFI+ Y K G ++
Sbjct: 514 ANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQ 573
Query: 476 MATMLRKEMFENQV 489
+A K+M + +
Sbjct: 574 VAERYFKDMLSSGI 587
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 166/351 (47%), Gaps = 23/351 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
F + LI ++ NIE+ + I +++RGL + V T NA+I +++ + +
Sbjct: 347 FTYTALIDGFIKEGNIEE---ALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSL 403
Query: 219 YREVF--GLDSDA------------TAGIGKDVKRVVRVR-----PNVHTFNALMVGFYR 259
+ E+ GL+ D + + K + + ++ P+ T++ L+ G
Sbjct: 404 FNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCH 463
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
+K +V +M R G +P+ + Y L+ + +E R A +L + M V D+
Sbjct: 464 SSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFC 523
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YN +I G C ++ A+ +MG G++ ++ T+ +N Y ++G++ A + DM
Sbjct: 524 YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML 583
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
G P +LI CD EAL K + K GL P ++Y +I L + GK
Sbjct: 584 SSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEK-GLIPDIRAYSAIIHSLSKNGKT 642
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+EA+ V + + G P + +Y++ I G+ KEG++E A+ L EM N +
Sbjct: 643 KEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGIN 693
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 131/241 (54%), Gaps = 4/241 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ ++A++ + G ++ V+++ + G PD + Y+ L++ FC+E + +A +L
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQL 683
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++EM + ++V YNT+I G C++GE+ +A E F E+ + VT+ +++GYC+
Sbjct: 684 YDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCK 743
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL-KARVVKFGLFPTE 423
+G++ A ++++M KG P+G +LI + + +AL + +A+ G
Sbjct: 744 SGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAF 803
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
S LI C+ GK+ EA ++ +MV K P++ Y+ ID Y K +E A L +
Sbjct: 804 NS---LIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLD 860
Query: 484 M 484
M
Sbjct: 861 M 861
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 125/247 (50%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+PNV + L+ + +E +E ++ M G PD + Y+ L+ C +++ EA+
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAK 541
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +M +K ++ + Y I + + GE+ AE +F++M SG+ ++V + L+ G+
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGH 601
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G+ A+ + M KG P+ +I L + EA+ + + +K G+ P
Sbjct: 602 CDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF-LKFLKTGVVPD 660
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y LI G C+EG +E+A ++ EM+ G P++ +Y+ I+G K G V A L
Sbjct: 661 VFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFD 720
Query: 483 EMFENQV 489
E+ E +
Sbjct: 721 EIEEKDL 727
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 123/242 (50%), Gaps = 2/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V +N+L+ GF +EG EK ++ EM G P+ Y+ L+ C+ + +A
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAR 716
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L++E+ +K++ DVV Y+TII G+C+ G + A + F EM G+ + L++G
Sbjct: 717 ELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGC 776
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G+++ A+ ++++ +K S LI C +V EA ++ V K L P
Sbjct: 777 GKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDK-KLTPN 834
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI + MEEA ++ +M + P+ Y++ + Y + GN L K
Sbjct: 835 IVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFK 894
Query: 483 EM 484
+M
Sbjct: 895 DM 896
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 169/385 (43%), Gaps = 63/385 (16%)
Query: 145 EVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
EVL + R G P F++ LIK ++ + E +++++++++ G+ + N L
Sbjct: 472 EVLDQMIRN-GVKPNVFMYGTLIKAYVQE---SRYEMAIELLKIMIANGVLPDLFCYNCL 527
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
I + R K V + ++ GI +PN HT+ A + + + G
Sbjct: 528 IIGLCRAKKVEEAKMLLVDM------GEKGI----------KPNAHTYGAFINLYSKSGE 571
Query: 263 FEKVEDVWVEMARLG---------------CE--------------------PDCYSYSV 287
+ E + +M G C+ PD +YS
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSA 631
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
++ + + +EA ++ + V DV YN++I GFC+ G++ +A + + EM +G
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ + V + L+NG C+ G+V A +++++ K P+ T +I C + EA
Sbjct: 692 INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAF 751
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+ + K G+ P Y LI G +EG +E+AL + E K SL +++ ID
Sbjct: 752 KLFDEMISK-GISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDS 809
Query: 468 YMKEGNVEMATMLRKEMFENQVRQE 492
+ K G V A +E+F++ V ++
Sbjct: 810 FCKHGKVIEA----RELFDDMVDKK 830
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 174/410 (42%), Gaps = 76/410 (18%)
Query: 105 LSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFD 162
+ +Y+ IIH LS+ G ++ + V L+ + + G P F+++
Sbjct: 626 IRAYSAIIHSLSKN---GKTKEAMGVFLK-----------------FLKTGVVPDVFLYN 665
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
LI + +IEK D ++ G++ + N LI + + V E++ E+
Sbjct: 666 SLISGFCKEGDIEKASQLYD---EMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEI 722
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+ K +V P+V T++ ++ G+ + G + ++ EM G PD
Sbjct: 723 -------------EEKDLV---PDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDG 766
Query: 283 YSYSVLMA----------------------------------VFCEERRMREAEKLWEEM 308
Y Y +L+ FC+ ++ EA +L+++M
Sbjct: 767 YIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDM 826
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
DK + ++V Y +I + + M AE+ F +M + +++T+ L+ Y + G+
Sbjct: 827 VDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNR 886
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
I ++ DM +G + V+ C + + EAL +L +V+ G+ + +
Sbjct: 887 FKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVE-GIKLEDDVFDA 945
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
LI LC+E ++ L++ +EM + S + + + G+ K GN + A+
Sbjct: 946 LIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEAS 995
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 107/212 (50%), Gaps = 1/212 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ FN+L+ F + G + +++ +M P+ +Y++L+ + + M EAE+L+
Sbjct: 799 SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLF 858
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M +N+ + + Y +++ + +IG + F++M G+ ++ + + + YC+
Sbjct: 859 LDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKE 918
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G A+ + N +G + E + LI LC ++++ L++L + + K L + K+
Sbjct: 919 GKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELL-SEMGKEELSLSSKT 977
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
L+ G + G +EA KV M G+ P+
Sbjct: 978 CNTLLLGFYKSGNEDEASKVLGVMQRLGWVPT 1009
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 72/144 (50%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ PN T+ +L++ + + G K+ ++ +M G D +Y V+ + +C+E + EA
Sbjct: 865 NIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEA 924
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KL + + ++ + ++ +I C+ +++ E EMG + SS T L+ G
Sbjct: 925 LKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLG 984
Query: 362 YCRAGDVDSAILVYNDMCRKGFEP 385
+ ++G+ D A V M R G+ P
Sbjct: 985 FYKSGNEDEASKVLGVMQRLGWVP 1008
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 172/356 (48%), Gaps = 26/356 (7%)
Query: 155 GSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
G AP F ++ +I C + +E+ T + + RGL T A I S+ +
Sbjct: 503 GVAPDIFCYNAIISCLSKAGKMEEAST---YLLEIQGRGLKPDAVTFGAFILGYSKTGKM 559
Query: 213 ISGYEIYREVFG-------------LDSDATAGIGKDVKRVVR------VRPNVHTFNAL 253
+ + E+ ++ AG + + R V P+V T +A
Sbjct: 560 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAF 619
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ G + G ++ V+ E+ G PD ++YS L++ FC++ + +A +L +EM K +
Sbjct: 620 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 679
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
++ YN ++ G C+ G++ RA + F M G+E SVT+ +++GYC++ +V A
Sbjct: 680 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 739
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
++++M KG +P L+ C + + +A+++ + + K F T S+ LI G
Sbjct: 740 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG--FATTLSFNTLIDGY 797
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
C+ K++EA ++ EM+ K P Y+ ID + K G +E A +L KEM E +
Sbjct: 798 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 853
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 192/420 (45%), Gaps = 24/420 (5%)
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL 143
+P L FF ++Q + L S++ + L + L G A V+ +R+P + + L
Sbjct: 85 DPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSI-L 143
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
VL GS+P VFD+LI K + ++ ++ + + + + + CN+L+
Sbjct: 144 DSVLFWFRNYGGSSPVVFDILID---SYKRMGMLDEAANVFFVAKNDSILISLIRCNSLL 200
Query: 204 ------------WEVSRGK-GVISGYEIYREVFGLDSDATAGIGKDVKRVV------RVR 244
W+V G G+++Y + + + G + KRV+ +
Sbjct: 201 KDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLN 260
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++ ++ G + G ++ ++ M G P+ Y+Y+++ A C +RM EA+
Sbjct: 261 PNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLT 320
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EEM+ ++ D A + +I GF G++ M G+ + +T+ L++G C+
Sbjct: 321 FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK 380
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G ++ A + M G +P T +LI C + + AL++L + K L P+
Sbjct: 381 FGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLD-EMEKRNLVPSAV 439
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
SY +I GLC + A K+ +M G +P++ +YS I Y EG +E A L M
Sbjct: 440 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGM 499
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 153/313 (48%), Gaps = 18/313 (5%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
+ I R L + G+ V TC+A I + + V +++ E+ +
Sbjct: 598 LSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL----------------KE 641
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ P+V T+++L+ GF ++G EK ++ EM G P+ + Y+ L+ C+ ++
Sbjct: 642 KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR 701
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A KL++ M +K +E D V Y+T+I G+C+ +A A F EM GV+ S + LV+
Sbjct: 702 ARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVH 761
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ GD++ A+ ++ +M +KGF S LI C ++ EA + + + K +
Sbjct: 762 GCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAK-QIM 819
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y +I C+ GKMEEA + EM + Y++ + GY K G L
Sbjct: 820 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 879
Query: 481 RKEMFENQVRQED 493
++M V+ ++
Sbjct: 880 FEKMVAKGVKPDE 892
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 131/244 (53%), Gaps = 1/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV ++ L++ + EG E+ + M+ G PD + Y+ +++ + +M EA
Sbjct: 469 LKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 528
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
E++ + ++ D V + I G+ + G+M A ++F EM G+ ++ + L+NG+
Sbjct: 529 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 588
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+AG++ A+ ++ + G P+ T I L RV EAL + + + + GL P
Sbjct: 589 FKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF-SELKEKGLVPD 647
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI G C++G++E+A ++ EM KG P++ IY+A +DG K G+++ A L
Sbjct: 648 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 707
Query: 483 EMFE 486
M E
Sbjct: 708 GMPE 711
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 161/344 (46%), Gaps = 24/344 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
F++ L+I+ +V +I++ V++ R + +GL T + + R K +
Sbjct: 264 FIYSLVIEGMCQVGDIDE---AVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLT 320
Query: 219 YREV--FGLDSDATA------GIGK--DVKRVVRVRP---------NVHTFNALMVGFYR 259
+ E+ GL D A G + D+ V+R++ N+ T+N L+ G +
Sbjct: 321 FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK 380
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G EK ++ M LGC+P+ ++ +L+ +C E M A +L +EM +N+ V+
Sbjct: 381 FGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 440
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
Y +I G C +++ A + +M SG++ + V + L+ Y G ++ A + + M
Sbjct: 441 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMS 500
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
G P+ +I L ++ EA L + GL P ++ I G + GKM
Sbjct: 501 CSGVAPDIFCYNAIISCLSKAGKMEEASTYL-LEIQGRGLKPDAVTFGAFILGYSKTGKM 559
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV-EMATMLRK 482
EA K EM+ G P+ +Y+ I+G+ K GN+ E ++ R+
Sbjct: 560 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRR 603
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 122/236 (51%), Gaps = 1/236 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+FN L+ G+ + ++ ++ EM PD +Y+ ++ C+ +M EA L++EM
Sbjct: 789 SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 848
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+++N+ D V Y +++ G+ ++G+ + F +M GV+ VT+ ++ +C+ ++
Sbjct: 849 QERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNL 908
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A + +++ KG +G+ ++LI LC + + EA +L + + GL P+ +
Sbjct: 909 VEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLD-EMGELGLKPSLAACNT 967
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
L++ E GKM+EA +V + G P ++G + + + E A L K++
Sbjct: 968 LVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 1023
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 121/261 (46%), Gaps = 24/261 (9%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
FV++ L+ C + ++EK +++ R ++ +G + +S N LI + + ++
Sbjct: 754 FVYNALVHGCCKEGDMEK---AMNLFREMLQKGFATTLSF-NTLIDGYCKSCKIQEASQL 809
Query: 219 YREVFG-------------LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYR 259
++E+ +D AG ++ + + + + T+ +LM G+ +
Sbjct: 810 FQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNK 869
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G +V ++ +M G +PD +Y +++ C+E + EA KL +E+ K +
Sbjct: 870 LGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI 929
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
++ +I C+ ++ A + EMG G++ S LV + AG +D A V+ +
Sbjct: 930 HDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVK 989
Query: 380 RKGFEPEGST-IEVLIGELCD 399
G P+ +T I+++ G L D
Sbjct: 990 SLGLVPDTTTLIDLVNGNLND 1010
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 17/154 (11%)
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY----NDMCRKGFEPEGSTIEVLI 394
+FR G SS V F+ L++ Y R G +D A V+ ND S ++ L+
Sbjct: 149 WFRNYG----GSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLL 204
Query: 395 GELCDKRRVFEAL--DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
C +F + +L A++ F ++ +Y +L+ LC+ G + A +V EM K
Sbjct: 205 K--CGMMELFWKVYNGMLDAKM-GFDVY----TYTYLVGALCKTGDLRGAKRVLIEMDEK 257
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
G P+ IYS I+G + G+++ A L++ M E
Sbjct: 258 GLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGE 291
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 135/249 (54%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P T+N ++ G+ +EGA + E V+ EM R P+ +Y+ L+ FC+ +M A K+
Sbjct: 569 PTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKM 628
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M+ K +E D+ Y T+I GFC++ +M A +FF ++ G+ +++ + +++ Y
Sbjct: 629 HDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRN 688
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
++++A+ ++ +M + LI L + ++ ALD+ + + G+ P
Sbjct: 689 LNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCR-GIVPDIF 747
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI GLC G++E A K+ EM G P++ +Y+ I G+ KEGN++ A L EM
Sbjct: 748 MYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEM 807
Query: 485 FENQVRQED 493
+ + +D
Sbjct: 808 LDKGLVPDD 816
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY----------------- 283
V V PNV F+ L+ + G EK +++ M +G +P +
Sbjct: 356 VGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLEN 415
Query: 284 -----------------SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+Y++++ CE ++ EA LW++M K + +V+YN +I G
Sbjct: 416 AYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILG 475
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
C+ G M A E + SG++ +++T+ L+ G + GD + A +++ M G P
Sbjct: 476 HCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPT 535
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T +I LC RV EA D L +K PT +Y +I G +EG ++ A V
Sbjct: 536 DYTFNSIINGLCKVGRVSEARDKLNT-FIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVY 594
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
EM P++ Y++ I+G+ K +++A + +M
Sbjct: 595 REMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDM 632
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 170/406 (41%), Gaps = 75/406 (18%)
Query: 141 LKLFEVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
L+LF+ +V E G P V F +LI+ C ++ N+EK ++ + GL V
Sbjct: 347 LRLFDEVV----EVGVTPNVAIFSVLIEWCSKIGNVEKAN---ELYTRMKCMGLQPTVFI 399
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV----------------- 241
N L+ + + + Y + LD GI V +
Sbjct: 400 LNFLLKGFRKQNLLENAYLL------LDGAVENGIASVVTYNIVLLWLCELGKVNEACNL 453
Query: 242 -------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+ P++ ++N +++G ++G + +V + G +P+ +Y++LM +
Sbjct: 454 WDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFK 513
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR------------------- 335
+ A ++++M + +N+II G C++G ++
Sbjct: 514 KGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMT 573
Query: 336 ----------------AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
AE +REM S + + +T+ L+NG+C++ +D A+ +++DM
Sbjct: 574 YNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMK 633
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
RKG E + + LI C + + A +++++ GL P Y +I M
Sbjct: 634 RKGLELDITVYATLIAGFCKMQDMENACKFF-SKLLEVGLTPNTIVYNIMISAYRNLNNM 692
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
E AL + EM+ L+IY++ IDG +KEG + A L EM
Sbjct: 693 EAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEML 738
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 1/225 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV T+ +L+ GF + + + +M R G E D Y+ L+A FC+ + M A
Sbjct: 602 ISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENAC 661
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K + ++ + + + + YN +I + + M A +EM + + + L++G
Sbjct: 662 KFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGL 721
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G + A+ +Y++M +G P+ VLI LC+ ++ A ILK + + PT
Sbjct: 722 LKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILK-EMDGNNITPT 780
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
Y LI G +EG ++EA ++ EM+ KG P Y ++G
Sbjct: 781 VLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 177/447 (39%), Gaps = 58/447 (12%)
Query: 82 KNNPHLALRFFSFTQHKSLCKHSLSSYATIIHIL-SRARLIGPARDVIRVALRSPENDPK 140
K +P ALRFF + K + ++ IL S G A+ ++ +
Sbjct: 72 KADPRSALRFFKQVETKGGFAKTADVLCLLLQILASNPETHGDAKHLLNKYVFGDSAPAA 131
Query: 141 LKLFEVLVKTYRECG---SAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
L E+LV+ G S VF+ L+ + KI V+ R ++ G+ V
Sbjct: 132 KVLVELLVECAERYGFKLSDSRVFNYLL---ISYVRANKITEAVECFRAMLEDGVVPWVP 188
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
N L+ + R V + ++ E+ +R R+ + +T LM
Sbjct: 189 FVNVLLTAMIRRNMVEDAHRLFDEM--------------AER--RIYGDCYTLQVLMRAC 232
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G F + E + + A G + D SYS+++ C + A KL E +
Sbjct: 233 LKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSE 292
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
Y +IG +G A EM S V + L+ GYC GDV+SA+ ++++
Sbjct: 293 GTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDE 352
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG----- 432
+ G P + VLI E C K E + L R+ GL PT FL+KG
Sbjct: 353 VVEVGVTPNVAIFSVLI-EWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQN 411
Query: 433 -----------------------------LCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
LCE GK+ EA + +M+GKG PSL Y+
Sbjct: 412 LLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNH 471
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQVR 490
I G+ K+G ++ A + + E+ ++
Sbjct: 472 MILGHCKKGCMDDAHEVMNGIIESGLK 498
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 75/154 (48%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V + PN +N ++ + E ++ EM D Y+ L+ +E ++
Sbjct: 670 VGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSF 729
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L+ EM + + D+ YN +I G C G++ A + +EM + + + + + L+
Sbjct: 730 ALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIA 789
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
G+ + G++ A ++++M KG P+ +T ++L+
Sbjct: 790 GHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILV 823
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 152/338 (44%), Gaps = 52/338 (15%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVIS-GYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
++ RGL V T N LI R +G ++ E++ ++ D P
Sbjct: 177 MLRRGLVPSVVTYNTLI-NACRFQGTVAKAQEVWDQMVAQQID----------------P 219
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV T+ ++ EG E ++ M G +P+ Y+Y+VLM+ C+ + A L+
Sbjct: 220 NVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLY 279
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+E+ + + V + T+I GFC+ + A+ F EM GV + + L++G R+
Sbjct: 280 QELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRS 339
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA------------- 412
G+ A+ +Y +M R G P+ T +++ LCD ++ A L+
Sbjct: 340 GNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAY 399
Query: 413 ---------------------RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
R+ + G+ P SY LI G + GKM+ A+ + EMV
Sbjct: 400 NALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVA 459
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
KG EP++ Y+A I G+ K G ++ A L KEM EN +
Sbjct: 460 KGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGI 497
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 124/258 (48%), Gaps = 7/258 (2%)
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
V R +R P + NA++ G + +++ EM R G P +Y+ L+ +
Sbjct: 141 VFRRLRTLPALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQG 200
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ +A+++W++M + ++ +VV Y T+I CE G + AE F M +G++ + T+
Sbjct: 201 TVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYN 260
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L++G+C+ DV+SA+++Y ++ + G P LI C +R EA + + +
Sbjct: 261 VLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMF-LEMPR 319
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
FG+ PT Y L+ G G +EAL + EM G P S + G G + +
Sbjct: 320 FGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHV 379
Query: 477 ATMLRKEMFENQVRQEDG 494
A + + QEDG
Sbjct: 380 ADRFLQGV------QEDG 391
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 112/222 (50%), Gaps = 1/222 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P V +N+LM G +R G ++ ++ EM RLG PD ++ S+++ C+ +M A+
Sbjct: 322 VAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVAD 381
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + +++ V + AYN +I +C IG + A M G+E + V++ L++G+
Sbjct: 382 RFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGH 441
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G + A+ +Y +M KG EP T LI + A + K +++ G+ P
Sbjct: 442 SKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHK-EMIENGISPN 500
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+ L+ GLC E +++EA++ E G ++S F
Sbjct: 501 AITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNF 542
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV T+ AL+ G + G + + EM G P+ + SVL+ C E R++EA
Sbjct: 462 IEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAV 521
Query: 303 KLWEE-----------------MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ E + ++ + + V Y T+I G G+ A + F M
Sbjct: 522 RFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRK 581
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
SG+ S T+ L+ G C G V +A+++Y DM + G +P IE
Sbjct: 582 SGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPTRYKIE 627
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 161/317 (50%), Gaps = 20/317 (6%)
Query: 187 LMSRGLSVKVSTCNALIW------EVSRGKGVIS-------GYEIYREVFGLDSDATAGI 233
+ ++G+S V T LI+ ++ G+++ +Y +D+ G
Sbjct: 225 MTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284
Query: 234 GKDVKRVVRV------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
K+ K V+ V +P+V T++ LM G++ +K + V+ M+ +G PD +SY++
Sbjct: 285 VKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTI 344
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ FC+ + + EA L++EM KN+ +V Y+++I G C+ G ++ + EM G
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG 404
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ ++ +T+ L++G C+ G +D AI ++N M +G P T +L+ LC R+ +A
Sbjct: 405 IPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQ 464
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+ + + K G Y +I G C++G +EEAL + ++M G P+ + I+
Sbjct: 465 EAFQDLLTK-GYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINA 523
Query: 468 YMKEGNVEMATMLRKEM 484
K+ + A L ++M
Sbjct: 524 LFKKDENDKAEKLLRQM 540
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 161/360 (44%), Gaps = 18/360 (5%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
P L +L+ + G F F +L K +K + T I + +GL +K
Sbjct: 92 PDLITLNILINCFCHMGQITFGFSVLAKI---LKRGYQPHT---ITFTTLIKGLCLKGQV 145
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG--KDVKRVVR------VRPNVHTF 250
AL + K + G + + +G + IG + ++VR +PNV +
Sbjct: 146 NKALHFH---DKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMY 202
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
N ++ + + ++ EM G D +Y+ L+ FC +++EA L EM
Sbjct: 203 NTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVL 262
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
K + +V YN ++ C+ G++ A+ M + V+ +T+ L++GY ++
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKK 322
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A V+N M G P+ + +LI C + V EAL++ K K + P +Y LI
Sbjct: 323 AQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQK-NMVPGIVTYSSLI 381
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
GLC+ G++ + EM +G ++ Y++ IDG K G+++ A L +M + +R
Sbjct: 382 DGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIR 441
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 115/252 (45%), Gaps = 1/252 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+R P + FN ++ F + + + + G +PD + ++L+ FC ++
Sbjct: 53 MRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITF 112
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ ++ + + + + T+I G C G++ +A F ++ G++ V++ L+N
Sbjct: 113 GFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLIN 172
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ GD AI + + + +P +I LC + V EA + K G+
Sbjct: 173 GVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAK-GIS 231
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y LI G C K++EA+ + EMV K P++ Y+ +D KEG V+ A +
Sbjct: 232 ADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNV 291
Query: 481 RKEMFENQVRQE 492
M + V+ +
Sbjct: 292 LAVMLKACVKPD 303
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 16/173 (9%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+I D++ + RG+ V T N+LI G+ + R + + GI
Sbjct: 389 RISYVWDLIDEMRDRGIPANVITYNSLI------DGLCKNGHLDRAIALFNKMKDQGI-- 440
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
RP TF L+ G + G + ++ + ++ G D Y Y+V++ C++
Sbjct: 441 --------RPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQ 492
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ EA + +M + + V ++ II + E +AE+ R+M G+
Sbjct: 493 GLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545
>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 194/440 (44%), Gaps = 62/440 (14%)
Query: 55 KSRWNHLL------SLCRSGLTPTQFSQIAL-GLKNNPHLALRFFSFTQHKSLCKHSLSS 107
K W ++L L +S + S+++L P L+ F+S+T CKHSL S
Sbjct: 23 KGNWKNILKHKVDSGLLKSSIITQVISELSLYSGYGGPSLSWSFYSWTDSLPSCKHSLQS 82
Query: 108 YATIIHILSRARLIGPARDVI-----RVALRSP----------ENDPKL--KLFEVLVKT 150
+I IL++ A ++ R L SP DP++ +F L+
Sbjct: 83 SWKMILILTKHNHFKTAHQLLDKLSQRELLSSPLVLRSLVGGVSEDPEVLSHVFSWLMIF 142
Query: 151 YRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
Y + G I + + +MS GL + C L+ + + +
Sbjct: 143 YAKSG--------------------MINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKER 182
Query: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
+ ++I++++ L V N+H +N L+ + G EK E +
Sbjct: 183 LTDTVWKIFKKMVKLG----------------VVANIHVYNVLVHACSKSGDSEKAEKLL 226
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
EM G PD ++Y+ L++V+C++ EA + + M V D+V YN++I GF
Sbjct: 227 SEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSRE 286
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G M A FR++ V ++ VT+ L++GYCR D+D A+ + M +GF P T
Sbjct: 287 GRMREATRLFRKIK-GVVMANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTY 345
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
++ +LC+ R+ EA +L VK + P + LI C+ M A+KV+ +M+
Sbjct: 346 NSILRKLCEDGRIREANRLLTEMSVK-KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMI 404
Query: 451 GKGFEPSLEIYSAFIDGYMK 470
G + + Y A I G+ K
Sbjct: 405 ESGLKLDMYSYKALIHGFCK 424
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 114/246 (46%), Gaps = 2/246 (0%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
H F+ LM+ + + G V+ ++ G +P + +VL+ +ER K++++
Sbjct: 134 HVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKERLTDTVWKIFKK 193
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M V ++ YN ++ + G+ +AE+ EM GV T+ L++ YC+
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
A+ V + M R G P+ T LI + R+ EA + R +K + +Y
Sbjct: 254 HFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLF--RKIKGVVMANHVTYT 311
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
LI G C ++EAL+++ M +GF P + Y++ + ++G + A L EM
Sbjct: 312 TLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVK 371
Query: 488 QVRQED 493
++ ++
Sbjct: 372 KIEPDN 377
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 125/242 (51%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P V T+ L+ G KVE V+ EM D Y YS ++ +C +R A
Sbjct: 209 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 268
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++++E +E + Y +I GFC+IG+M AE +M + GV + + F +++GY
Sbjct: 269 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 328
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR VD A+ + M + G E + T L L R+ EA ++L+ + K G+ P
Sbjct: 329 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEK-GVRPN 387
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY LI C EG M EA ++ EM G G EPSL Y+ +DGY+K+G++ A +K
Sbjct: 388 HVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKK 447
Query: 483 EM 484
EM
Sbjct: 448 EM 449
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 113/220 (51%), Gaps = 1/220 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N FN ++ G+ R+ +K ++ + M ++G E D Y+Y+ L RM EA+ L
Sbjct: 317 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 376
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M +K V + V+Y T+I C G+M A FREM +G E S VT+ +++GY +
Sbjct: 377 RIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKK 436
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + A +M +KG P+ + L+ C +V AL + + + + G P +
Sbjct: 437 GSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFE-EMKQRGSKPNLVA 495
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
Y LI GL +EG+ EEA ++ M+G G P +YSA +
Sbjct: 496 YTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 156/350 (44%), Gaps = 22/350 (6%)
Query: 147 LVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
++K G P V + +L+ ++I K+E + + S+ LS V +++I
Sbjct: 200 MLKVMENEGIEPTVGTYTILVDGLSAARDITKVEA---VFEEMKSKNLSGDVYFYSSVIN 256
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
R V E++ E G + PN HT+ AL+ GF + G E
Sbjct: 257 AYCRAGNVRRASEVFDECVGNG----------------IEPNEHTYGALINGFCKIGQME 300
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
E + +M G + ++ ++ +C + + +A ++ M +E DV YNT+
Sbjct: 301 AAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLA 360
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G M A+ R M GV + V++ L++ +C GD+ A ++ +M G E
Sbjct: 361 CGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAE 420
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P T V++ K + EA + K + K GL P SY L+ G C GK++ AL+
Sbjct: 421 PSLVTYNVMMDGYIKKGSIREA-ERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALR 479
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+ EM +G +P+L Y+A I G KEG E A L M + + +D
Sbjct: 480 LFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDA 529
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 1/235 (0%)
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G+ + G + EM R G + + Y+ L+ + E+ ++ + M ++ +E
Sbjct: 152 GYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEP 211
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
V Y ++ G ++ + E F EM + + ++N YCRAG+V A V+
Sbjct: 212 TVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVF 271
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
++ G EP T LI C K EA ++L + G+ + + +I G C
Sbjct: 272 DECVGNGIEPNEHTYGALINGFC-KIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 330
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+ +++AL+++ M G E + Y+ G + ++ A L + M E VR
Sbjct: 331 KNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVR 385
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 7/197 (3%)
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
S SV++ +C+ R+ A +L +EM V+ + + YN+++ + + R E + M
Sbjct: 145 SASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVM 204
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DK 400
G+E + T+ LV+G A D+ V+ +M K + +I C +
Sbjct: 205 ENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNV 264
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
RR E D V G+ P E +Y LI G C+ G+ME A + +M +G + +
Sbjct: 265 RRASEVFD----ECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIV 320
Query: 461 YSAFIDGYMKEGNVEMA 477
++ IDGY ++ V+ A
Sbjct: 321 FNTMIDGYCRKNMVDKA 337
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 205/427 (48%), Gaps = 43/427 (10%)
Query: 88 ALRFFSFTQHKSLCK-HSLSSYATIIHILSRARLIGPARDVIRVALR------SPEN--- 137
A + F + + K + L S++ +IH+L+ A AR +I+ + P N
Sbjct: 57 AFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSH 116
Query: 138 ----------DPKLKL--FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVR 185
PK + F +L+ + E G +F+ + E+K + C+ I+
Sbjct: 117 RLFNALEDIQSPKFSIGVFSLLIMEFLEMG----LFEEALWVSREMKCSPDSKACLSILN 172
Query: 186 MLMSRGL--SVKVSTCNALIWEVSRGKGVISGYEIYREVF------GLDSDATAGIGKDV 237
L+ R SV V +++ +G++ IY +F GL S + D
Sbjct: 173 GLVRRRRFDSVWVD------YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLL--DE 224
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
+ ++PNV+ + ++ R+ E+ E ++ M + G P+ Y+YS ++ +C+
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGN 284
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+R+A L++E+ + +VV + T++ GFC+ E+ A F M GV+ + +
Sbjct: 285 VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNC 344
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++G+C++G++ A+ + ++M P+ T +LI LC + +V EA + L ++
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA-NRLFQKMKNE 403
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+FP+ +Y LI G C+E ME+AL + +EM G EP++ +S IDGY +++ A
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 478 TMLRKEM 484
L EM
Sbjct: 464 MGLYFEM 470
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 148/316 (46%), Gaps = 19/316 (6%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
K+E + ++ G+ + T +A+I + V Y +Y+E+
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL----------- 296
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
V + PNV F L+ GF + ++V M + G +P+ Y Y+ L+ C+
Sbjct: 297 -----VAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
M EA L EM N+ DV Y +I G C ++A A F++M + SS T
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSAT 411
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L++GYC+ +++ A+ + ++M G EP T LI C+ R + A+ +
Sbjct: 412 YNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT 471
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+K G+ P +Y LI +E M+EAL++ ++M+ G P+ ++ +DG+ KEG +
Sbjct: 472 IK-GIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL 530
Query: 475 EMATMLRKEMFENQVR 490
+A +E NQ R
Sbjct: 531 SVAIDFYQE--NNQQR 544
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 136/282 (48%), Gaps = 36/282 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN++ +N L+ G + G + + EM L PD ++Y++L+ C E ++ EA
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEAN 394
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+++M+++ + YN++I G+C+ M +A + EM SGVE + +TF L++GY
Sbjct: 395 RLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGY 454
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C D+ +A+ +Y +M KG P+ T LI + + EAL L + +++ G+ P
Sbjct: 455 CNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR-LYSDMLEAGIHPN 513
Query: 423 EKSY-----------------------------------MFLIKGLCEEGKMEEALKVQA 447
+ ++ LI+GLC+ G + A + +
Sbjct: 514 DHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFS 573
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+M G P + Y + + G+++E + ML+ +M + +
Sbjct: 574 DMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 615
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN+ TF+ L+ G+ + ++ EM G PD +Y+ L+ +E M+EA
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEAL 499
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ +M + + + + ++ GF + G ++ A +F++E + V F L+ G
Sbjct: 500 RLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGL 559
Query: 363 CRAGDVDSAILVYNDMCRKGFEPE-GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G + A ++DM G P+ S + +L G L ++R+ + + +L+ ++K G+ P
Sbjct: 560 CQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHL-QEKRITDTM-MLQCDMIKTGILP 617
Query: 422 T 422
Sbjct: 618 N 618
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 172/356 (48%), Gaps = 26/356 (7%)
Query: 155 GSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
G AP F ++ +I C + +E+ T + + RGL T A I S+ +
Sbjct: 215 GVAPDIFCYNAIISCLSKAGKMEEAST---YLLEIQGRGLKPDAVTFGAFILGYSKTGKM 271
Query: 213 ISGYEIYREVFG-------------LDSDATAGIGKDVKRVVR------VRPNVHTFNAL 253
+ + E+ ++ AG + + R V P+V T +A
Sbjct: 272 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 331
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ G + G ++ V+ E+ G PD ++YS L++ FC++ + +A +L +EM K +
Sbjct: 332 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 391
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
++ YN ++ G C+ G++ RA + F M G+E SVT+ +++GYC++ +V A
Sbjct: 392 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 451
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
++++M KG +P L+ C + + +A+++ + + K F T S+ LI G
Sbjct: 452 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG--FATTLSFNTLIDGY 509
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
C+ K++EA ++ EM+ K P Y+ ID + K G +E A +L KEM E +
Sbjct: 510 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 565
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 132/244 (54%), Gaps = 1/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV ++ L++G+ EG E+ + M+ G PD + Y+ +++ + +M EA
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
E++ + ++ D V + I G+ + G+M A ++F EM G+ ++ + L+NG+
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+AG++ A+ ++ + G P+ T I L RV EAL + + + + GL P
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF-SELKEKGLVPD 359
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI G C++G++E+A ++ EM KG P++ IY+A +DG K G+++ A L
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 419
Query: 483 EMFE 486
M E
Sbjct: 420 GMPE 423
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 158/341 (46%), Gaps = 36/341 (10%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDA------TAG 232
+ I R L + G+ V TC+A I + + V +++ E+ GL D +G
Sbjct: 310 LSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 369
Query: 233 IGK--DVKRVVR---------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
K +V++ + PN+ +NAL+ G + G ++ ++ M G EPD
Sbjct: 370 FCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPD 429
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
+YS ++ +C+ + EA L+ EM K V+ YN ++ G C+ G+M +A FR
Sbjct: 430 SVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFR 489
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM G +++++F L++GYC++ + A ++ +M K P+ T +I C
Sbjct: 490 EMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAG 548
Query: 402 RVFEALDILKA----------------RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
++ EA + K ++V G+ P E +Y +I C+E + EA K+
Sbjct: 549 KMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 608
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ E+VGKG I+ I K ++ A+ L EM E
Sbjct: 609 RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 649
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 118/240 (49%), Gaps = 1/240 (0%)
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
KDV + N+ T+N L+ G + G EK ++ M LGC+P+ ++ +L+ +C
Sbjct: 68 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 127
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E M A +L +EM +N+ V+Y +I G C +++ A + +M SG++ + V
Sbjct: 128 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 187
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ GY G ++ A + + M G P+ +I L ++ EA L +
Sbjct: 188 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL-LEI 246
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
GL P ++ I G + GKM EA K EM+ G P+ +Y+ I+G+ K GN+
Sbjct: 247 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 306
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 1/234 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +T+ + G R + + + EM + G +PD + S L+ F E + E ++
Sbjct: 8 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 67
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + +++ YN +I G C+ G+M +A E + M G + +S TF L+ GYCR
Sbjct: 68 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 127
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
++ A+ + ++M ++ P + +I LC + + A +L+ ++ GL P
Sbjct: 128 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE-KMTFSGLKPNVV 186
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
Y LI G EG++EEA ++ M G P + Y+A I K G +E A+
Sbjct: 187 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 1/212 (0%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M G P+ Y+Y+++ A C +RM EA+ +EEM+ ++ D A + +I GF G+
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ M G+ + +T+ L++G C+ G ++ A + M G +P T +
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI C + + AL++L + K L P+ SY +I GLC + A K+ +M
Sbjct: 121 LIEGYCREHNMGRALELLD-EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G +P++ +YS I GY EG +E A L M
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGM 211
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 128/259 (49%), Gaps = 19/259 (7%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+ +NAL+ G +EG EK +++ EM + G S++ L+ +C+ +++EA
Sbjct: 461 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATT-LSFNTLIDGYCKSCKIQEAS 519
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG-----------------L 345
+L++EM K + D V Y T+I C+ G+M A F+EM
Sbjct: 520 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVA 579
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
GV+ VT+ ++ +C+ ++ A + +++ KG +G+ ++LI LC + + E
Sbjct: 580 KGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTE 639
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
A +L + + GL P+ + L++ E GKM+EA +V + G P +
Sbjct: 640 ASKLLD-EMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLV 698
Query: 466 DGYMKEGNVEMATMLRKEM 484
+G + + + E A L K++
Sbjct: 699 NGNLNDTDSEDARNLIKQL 717
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 96/225 (42%), Gaps = 30/225 (13%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+FN L+ G+ + ++ ++ EM PD +Y+ ++ C+ +M EA L++EM
Sbjct: 501 SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 560
Query: 309 RDKN-----------------VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
+++N V+ D V Y +I C+ + A + E+ G+ +
Sbjct: 561 QERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTK 620
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFE 405
+ L+ C+ D+ A + ++M G +P + L+ G++ + RVFE
Sbjct: 621 GTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFE 680
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
V GL P + + L+ G + E+A + ++V
Sbjct: 681 G-------VKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 114/259 (44%), Gaps = 38/259 (14%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
FV++ L+ C + ++EK +++ R ++ +G + +S N LI + + ++
Sbjct: 466 FVYNALVHGCCKEGDMEK---AMNLFREMLQKGFATTLSF-NTLIDGYCKSCKIQEASQL 521
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL-- 276
++E+ I K ++ P+ T+ ++ + G E+ ++ EM
Sbjct: 522 FQEM----------IAK------QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 565
Query: 277 ---------------GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
G +PD +Y +++ C+E + EA KL +E+ K + ++
Sbjct: 566 IVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHD 625
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
+I C+ ++ A + EMG G++ S LV + AG +D A V+ +
Sbjct: 626 LLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSL 685
Query: 382 GFEPEGST-IEVLIGELCD 399
G P+ +T I+++ G L D
Sbjct: 686 GLVPDTTTLIDLVNGNLND 704
>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
[Oryza sativa Japonica Group]
Length = 580
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 196/423 (46%), Gaps = 40/423 (9%)
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR------VALRSPEND 138
PH ALR F + + + + +S A ++ L+++R+ AR V VA+ + +
Sbjct: 126 PHDALRVFDHMRAREVVPDAHASSA-LLTALAKSRMTATARKVFDQMTRAGVAMNTHVYN 184
Query: 139 PKLK---------LFEVLVKTYRECGSAP---FVFDLLIKCCLEVKNIEKIETCVDIVRM 186
L L E L+ T + P F F+ +I K ++ CV
Sbjct: 185 AMLHVCLKAGDAALAESLM-TRMDAAGVPLDRFSFNTVIALYCR-KGMQYEAMCVR--ER 240
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+ ++G+ V T N+LI + + + V ++ RE+ A AG+ P+
Sbjct: 241 MENQGVKADVVTWNSLIHGLCKERRVKEASQLLREM------AMAGVA----------PD 284
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
T+ L+ G+ R G E+ + EM +G P +Y+ ++ CE+ +M+E L
Sbjct: 285 HVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLN 344
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
EM ++ V+ D V NT+I +C+ G+M A + R M SG++ T++ LV+G+C+A
Sbjct: 345 EMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAK 404
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++D A +M GF P S + ++ LC+K L I ++K G P + Y
Sbjct: 405 ELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAI-PDELMKRGFPPDKAVY 463
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI+ LC++G ++ A V EM GKG E +Y+ Y+ G A + EM +
Sbjct: 464 RSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAK 523
Query: 487 NQV 489
Q+
Sbjct: 524 KQL 526
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD ++ S L+ + R A K++++M V + YN ++ + G+ A AE
Sbjct: 143 PDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCLKAGDAALAESL 202
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
M +GV +F ++ YCR G A+ V M +G + + T LI LC
Sbjct: 203 MTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCK 262
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+RRV EA +L+ + G+ P +Y L+ G C G +EEA+K++ EM G P +
Sbjct: 263 ERRVKEASQLLR-EMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVA 321
Query: 460 IYSAFI-----DGYMKEGNVEMATMLRKEMFENQVRQE 492
Y+A + DG MKE NV L EM E +V+ +
Sbjct: 322 TYNAILRKLCEDGKMKEVNV-----LLNEMDERKVQAD 354
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 158/322 (49%), Gaps = 22/322 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE---------VFGLD 226
K++ VD+ ++ RG N LI S+ + Y ++ E VF +
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196
Query: 227 SDATA-----------GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
S + + KD+ R V PN+ TFN L+ GF + G + +++EM
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCV-PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
LGC PD SY+ LM C + + EA++L EM V D+V+YN +I G+ + G +
Sbjct: 256 LGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A + F E+ SG+E + ++ +++ CRAG V +A +V+ DM G P+ + + L+
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVI 375
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
LC R+ E+ ++ +A +VKF P Y L+ LC+ + ++ ++ E+ +GF
Sbjct: 376 GLCRGERLTESCELFQA-MVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFS 434
Query: 456 PSLEIYSAFIDGYMKEGNVEMA 477
P +EI ++ + + E A
Sbjct: 435 PDVEISKVILETLRRSDDKEAA 456
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 164/334 (49%), Gaps = 20/334 (5%)
Query: 154 CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVI 213
C + + L++ + + E+ + + R + ++G S V + + LI + RG+ V
Sbjct: 48 CVPNTYTYGYLLRSLCQAQRFEEARS---VFRGMAAQGCSPNVFSYSILIAGLCRGQKVD 104
Query: 214 SGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
E+ E+ +D +PNV T+ +L+ G + G ++ D++ M
Sbjct: 105 EAAELLNEM--IDGGH--------------QPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
GC PD Y+VL+ F ++ M EA +L+EEM +K V YN+++ GF GE
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
R + F++M G + TF +L++G+C+ GD+ A ++ +M G P+ + L
Sbjct: 209 GRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTL 268
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ +C K + EA +L+ +++ G+ P SY LI G + G ++ A+K+ E+ G
Sbjct: 269 MRGMCSKGKPHEAQRLLR-EMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
EP YS ID + G V A ++ K+M N
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIAN 361
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 116/236 (49%), Gaps = 1/236 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++N L+ + G + V + +M GC P+ Y+Y L+ C+ +R EA ++ M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ +V +Y+ +I G C ++ A E EM G + + VT+ L++G C+ G +
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A+ +++ M +G P+G VLI K + EA + + + K G PT +Y
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK-GCIPTVFTYNS 197
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
L+ G +G+ + +M+ +G P++ ++ +DG+ K G++ A L EM
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 1/173 (0%)
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
H ++YN ++ + G + +M +G ++ T+ +L+ C+A + A
Sbjct: 14 NHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARS 73
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
V+ M +G P + +LI LC ++V EA ++L ++ G P +Y L+ GL
Sbjct: 74 VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLN-EMIDGGHQPNVVTYGSLLSGL 132
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
C+ GK++EA+ + + MV +G P +Y+ IDG+ K+G++ A L +EM E
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLE 185
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 134/243 (55%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN+L+ G+ + G ++VE + EM R GC+ D +Y+ L+ FC+ RM A
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGY 280
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M+ + V +VV ++T + FC+ G + A + F +M + G+ + T+ L++G C+
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG +D AI++ ++M R+G T VL+ LC +R+V EA D+L+ + K G+ E
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM-MEKAGVRANEL 399
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G E+AL + +EM KG E + +Y A I G ++ A L +M
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459
Query: 485 FEN 487
E+
Sbjct: 460 DES 462
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 127/247 (51%), Gaps = 1/247 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV T+ L+ G +E + EDV M + G + Y+ L+ + +A L
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM++K +E D+ Y +I G C + ++ A+ +M SG+E + + + +++ ++
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G V AI + + GF+P T LI LC + EA+ ++ GL P ++
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFN-KMRDLGLDPNVQA 540
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y L+ GLC+ G + EA+++ EMV KG +Y+A +DGY+K+GN+ A L+ +M
Sbjct: 541 YTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMI 600
Query: 486 ENQVRQE 492
++ ++ +
Sbjct: 601 DSGLQLD 607
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 138/270 (51%), Gaps = 7/270 (2%)
Query: 224 GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
GL DA + + R +RV PN T N +++ R+ + V ++ ++ P+ +
Sbjct: 136 GLLDDAVRAVAR--VRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP----APNVF 189
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
++++++ C+E + EA L+ M++ DVV +N++I G+ + GE+ E+ EM
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
SG ++ VT+ L+N +C+ G +++A + M R+G T + C + V
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
EA+ + V+ G+ E +Y LI G C+ G++++A+ + EMV +G ++ Y+
Sbjct: 310 REAMKLFAQMRVR-GMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+DG KE V A + + M + VR +
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANE 398
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 1/239 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ + AL+ G ++ + + +M G EP+ Y+ +M + ++ EA +
Sbjct: 432 DISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAML 491
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+++ D + +V+ Y +I G C+ G + A F +M G++ + + LV+G C+
Sbjct: 492 QKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKN 551
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G ++ A+ ++N+M KG + L+ + + +A LKA+++ GL
Sbjct: 552 GCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAF-ALKAKMIDSGLQLDLFC 610
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y I G C M EA +V +EM+G G P +Y+ I Y K GN+E A L+ EM
Sbjct: 611 YTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 126/235 (53%), Gaps = 1/235 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V NV TF+ + F +EG + ++ +M G + ++Y+ L+ C+ R+ +A
Sbjct: 289 VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAI 348
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM + V +VV Y ++ G C+ ++A AE+ R M +GV ++ + + L++G+
Sbjct: 349 VLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGH 408
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ + A+ + ++M KG E + S LI LC+ ++ EA +L ++ + GL P
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLL-TKMDESGLEPN 467
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
Y ++ + GK+ EA+ + +++ GF+P++ Y A IDG K G+++ A
Sbjct: 468 YIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEA 522
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 27/249 (10%)
Query: 137 NDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSV 194
N KL + L+ E G P ++ ++ C + K+ + +++ ++ G
Sbjct: 445 NVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSG---KVPEAIAMLQKILDSGFQP 501
Query: 195 KVSTCNALIWEVSRGKGV---ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFN 251
V T ALI + + + IS + R++ GLD PNV +
Sbjct: 502 NVITYCALIDGLCKAGSIDEAISHFNKMRDL-GLD------------------PNVQAYT 542
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
AL+ G + G + ++ EM G D Y+ L+ + ++ + +A L +M D
Sbjct: 543 ALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDS 602
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
++ D+ Y I GFC + M A E F EM G+ + L++ Y + G+++ A
Sbjct: 603 GLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEA 662
Query: 372 ILVYNDMCR 380
I + ++M R
Sbjct: 663 ISLQDEMER 671
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 130/242 (53%), Gaps = 5/242 (2%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N+L+ G G +++V + +M R +PD Y++++L+ C+E R+ EA+ + M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + D+V YN ++ G+C + A E F M G+E + + L++GYC+ V
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D A++++ ++C K P ++ LI LC+ R+ +L + P +Y
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLD-EMHGSAQPPDVVTYNI 410
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI LC+EG++ EAL V M+ KG +P++ Y+A +DGY NV +A K++F
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVA----KDIFNRM 466
Query: 489 VR 490
V+
Sbjct: 467 VK 468
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 126/242 (52%), Gaps = 2/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+PN+ T+NA+M G+ +D++ M + G EPD +Y+VL+ +C+ + EA
Sbjct: 436 VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAI 495
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++EMR KN+ D+ +YN++I G C +G + +E EM SG +T+ L++ +
Sbjct: 496 VLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAF 555
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ D AI ++ + +G P+ T ++ LC ++ A D LK ++ G P
Sbjct: 556 CKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALK-HLLMHGCSPN 613
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++Y LI LC++G EA+ + ++M P + I ++ + A LR+
Sbjct: 614 VQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLRE 673
Query: 483 EM 484
EM
Sbjct: 674 EM 675
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P++ T+NALM G+ + +++ M + G EPD +Y+VL+ +C+ + + EA
Sbjct: 297 KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMV 356
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L++E+ +KN+ + +YN++I G C G ++ ++ EM S VT+ L++ C
Sbjct: 357 LFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALC 416
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G + A+ V M +KG +P T ++ C + V A DI R+VK GL P
Sbjct: 417 KEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN-RMVKSGLEPDI 475
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI G C+ ++EA+ + EM K P + Y++ IDG G + L E
Sbjct: 476 LNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDE 535
Query: 484 M 484
M
Sbjct: 536 M 536
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 129/250 (51%), Gaps = 3/250 (1%)
Query: 237 VKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+ ++VR V P+ +TFN L+ +EG + + V M++ G +PD +Y+ LM +C
Sbjct: 253 LTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCS 312
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ EA +L+ M + +E DV+ YN +I G+C+ + A F+E+ + + +
Sbjct: 313 RENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIAS 372
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L++G C +G + + ++M P+ T +LI LC + R+ EAL +L +
Sbjct: 373 YNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVL-VMM 431
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+K G+ P +Y ++ G C + A + MV G EP + Y+ I+GY K V
Sbjct: 432 MKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMV 491
Query: 475 EMATMLRKEM 484
+ A +L KEM
Sbjct: 492 DEAIVLFKEM 501
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 122/241 (50%), Gaps = 1/241 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN+ TFN ++ GF G K D + G D ++Y L+ + +++ A
Sbjct: 122 QPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALH 181
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +EM +V+ ++V Y+ +I G C+ G ++ A ++G G+ +VT+ L++G C
Sbjct: 182 LLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCC 241
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G + M R+ +P+ T +LI LC + R+ EA +L A + K G P
Sbjct: 242 SVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVL-AMMSKRGEKPDI 300
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L++G C + EA ++ MV +G EP + Y+ IDGY K V+ A +L KE
Sbjct: 301 VTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKE 360
Query: 484 M 484
+
Sbjct: 361 L 361
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 153/368 (41%), Gaps = 34/368 (9%)
Query: 123 PARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLL---IKCCLEVKNIEKIET 179
P + L+S P + F +L+ Y F F LL +K + N+ T
Sbjct: 72 PTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQ-PNLVTFNT 130
Query: 180 CV-------------DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
+ D + L+++G T LI +S+ + + + +E+
Sbjct: 131 IINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM---- 186
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
V+PN+ ++AL+ G ++G + ++ G D +Y+
Sbjct: 187 ------------EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYN 234
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L+ C R +E +L +M +NV+ D +N +I C+ G + A+ M
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKR 294
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G + VT+ L+ GYC +V A ++N M ++G EP+ VLI C + V EA
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEA 354
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ + K K L PT SY LI GLC G++ K+ EM G P + Y+ ID
Sbjct: 355 MVLFKELCNK-NLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILID 413
Query: 467 GYMKEGNV 474
KEG +
Sbjct: 414 ALCKEGRI 421
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 140/303 (46%), Gaps = 18/303 (5%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
E + ++ ++ RGL V N LI + K V +++E+
Sbjct: 314 ENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN---------- 363
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
K +V P + ++N+L+ G G V+ + EM PD +Y++L+ C+
Sbjct: 364 ---KNLV---PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E R+ EA + M K V+ ++V YN ++ G+C + A++ F M SG+E +
Sbjct: 418 EGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILN 477
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+NGYC+ VD AI+++ +M K P+ ++ LI LC+ R+ ++L +
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLD-EM 536
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
G P +Y L+ C+ ++A+ + ++V +G P A +D K +
Sbjct: 537 CDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKL 595
Query: 475 EMA 477
+MA
Sbjct: 596 KMA 598
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 125/290 (43%), Gaps = 40/290 (13%)
Query: 238 KRVVRVRPNVHT--FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R+VRV P T F+ L+ R G + ++ ++ G P ++++L+ + +
Sbjct: 44 NRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQ 103
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
A L + + ++V +NTII GFC G + +A +F + + G T+
Sbjct: 104 SHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTY 163
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI------ 409
L+NG + G + +A+ + +M + +P LI LC V +AL +
Sbjct: 164 GTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGE 223
Query: 410 ----------------------------LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
L ++V+ + P + ++ LI LC+EG++ E
Sbjct: 224 RGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILE 283
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
A V A M +G +P + Y+A ++GY NV A +E+F V++
Sbjct: 284 AQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEA----RELFNRMVKR 329
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 102/239 (42%), Gaps = 4/239 (1%)
Query: 258 YREGAFEKVEDV---WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
++ F V+D + M R+ P + L+ A L+ +++ K +
Sbjct: 28 HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
+ + +I + A A + SG + + VTF ++NG+C G + A+
Sbjct: 88 PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
++ +G+ + T LI L ++ AL +L+ + K + P Y LI GLC
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQ-EMEKSSVQPNLVMYSALIDGLC 206
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
++G + +AL + +++ +G Y++ IDG G + T L +M V +D
Sbjct: 207 KDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDD 265
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 130/329 (39%), Gaps = 48/329 (14%)
Query: 30 SSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIAL----GLKNNP 85
S+ PP ++N++ + +L R L+ + + G+ P + A+ L+NN
Sbjct: 399 SAQPPDVVTYNIL--IDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNV 456
Query: 86 HLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFE 145
++A F+ KS + + +Y +I+ + ++ A V+ +R P + +
Sbjct: 457 NVAKDIFN-RMVKSGLEPDILNYNVLINGYCKTEMVDEAI-VLFKEMRHKNLIPDIASYN 514
Query: 146 VLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWE 205
L+ G P V +LL + C G S V T N L+
Sbjct: 515 SLIDGLCNLGRIPHVQELLDEMC--------------------DSGQSPDVITYNILLDA 554
Query: 206 VSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEK 265
+ + ++R++ V + P+ +T +A++ + +
Sbjct: 555 FCKTQPFDKAISLFRQI-----------------VEGIWPDFYTNHAIVDNLCKGEKLKM 597
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
ED + GC P+ +Y++L+ C++ EA L +M D + D + + IIG
Sbjct: 598 AEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIG 657
Query: 326 GFCEIGEMARAEEFFREM---GLSGVESS 351
+ E +AE+ EM GL +E S
Sbjct: 658 VLLQRNETDKAEKLREEMIARGLVNIEKS 686
>gi|357144033|ref|XP_003573143.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g38730-like [Brachypodium distachyon]
Length = 599
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 158/334 (47%), Gaps = 50/334 (14%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+ +RGL+ C AL+ ++R + + ++++ E+ AG+ N
Sbjct: 137 MRARGLAPDAHACTALLTALARARMTATAHKVFNEM------GRAGVAM----------N 180
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
H +NA++ + + E + M G D +S++ ++A++ + EA + E
Sbjct: 181 THVYNAMLHVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALYVRKGMQYEAMCVRE 240
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M+D+ VE D+V +NT+I G C+ G M A + +M + VE +VT+ LV+GYCR G
Sbjct: 241 RMQDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIG 300
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL---------------- 410
DV A+ + +M G P +T +I +LC+ ++ E +L
Sbjct: 301 DVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCN 360
Query: 411 ------------------KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
K R+++ GL + +Y LI G C+ +++EA + EM+G+
Sbjct: 361 TLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALFEMMGR 420
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
GF P+ ++S +DG+ K+ N + ++ E+ +
Sbjct: 421 GFSPNYSVFSWLVDGFCKKNNTDAVLLIPDELIK 454
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 126/247 (51%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ T+ L+ G+ R G + + EM G P +Y+ ++ CE+ +M+E
Sbjct: 282 VEPDTVTYTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVN 341
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EM + V+ D V NT+I + + G+M A + + M SG++ T++ L++G+
Sbjct: 342 GLLSEMDGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGF 401
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A ++D A +M +GF P S L+ C K +A+ ++ ++K GL P
Sbjct: 402 CKAKELDEAKEALFEMMGRGFSPNYSVFSWLVDGFCKKNNT-DAVLLIPDELIKRGLPPD 460
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ Y LI+ LC++G ++ A KV +M GKG E +Y+ ++ G V A+ +
Sbjct: 461 KSVYRSLIRRLCKKGLVDLAQKVLHQMQGKGLEVDCLVYATLAYAHLTAGKVAAASDILN 520
Query: 483 EMFENQV 489
EM Q+
Sbjct: 521 EMARKQM 527
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 6/250 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V ++ L + V+ +M G PD ++ + L+ R A K+
Sbjct: 109 PHVPSWLLLALSHSHSARPHDAARVFDQMRARGLAPDAHACTALLTALARARMTATAHKV 168
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM V + YN ++ + + RAE M +GV +F ++ Y R
Sbjct: 169 FNEMGRAGVAMNTHVYNAMLHVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALYVR 228
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G A+ V M +G EP+ T +I LC + R+ EA L+ ++ + P
Sbjct: 229 KGMQYEAMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEAAQ-LRTDMIAAAVEPDTV 287
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI-----DGYMKEGNVEMATM 479
+Y L+ G C G + EA+K++ EM G P + Y+A I DG MKE N ++ M
Sbjct: 288 TYTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEM 347
Query: 480 LRKEMFENQV 489
+++ + V
Sbjct: 348 DGRKVQADHV 357
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 16/180 (8%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+ + +M GL + T ALI + K + E E+ G
Sbjct: 378 VKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALFEMMGRG---------------- 421
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN F+ L+ GF ++ + V + E+ + G PD Y L+ C++ + A+
Sbjct: 422 FSPNYSVFSWLVDGFCKKNNTDAVLLIPDELIKRGLPPDKSVYRSLIRRLCKKGLVDLAQ 481
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+ +M+ K +E D + Y T+ G++A A + EM + + + L Y
Sbjct: 482 KVLHQMQGKGLEVDCLVYATLAYAHLTAGKVAAASDILNEMARKQMSVTPQIYNCLCTSY 541
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 167/357 (46%), Gaps = 22/357 (6%)
Query: 152 RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV-SRGK 210
R C P ++ ++++ + V +++ L RG ++ V CN ++ V +G
Sbjct: 144 RGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGG 203
Query: 211 GVISGYEIYREV---FGLDSDATA--------------GIGKDV-KRVVRV--RPNVHTF 250
V + R++ FG D D + G +D+ + +VRV PNV TF
Sbjct: 204 SVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTF 263
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
N L+ R G FE+V V +M GC PD Y+ ++ C+E + A ++ + M
Sbjct: 264 NTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPS 323
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
++ +VV YNT++ G C +AEE EM + VTF LV+ +C+ G V
Sbjct: 324 YGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYR 383
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
I + M G P+ T +I C + + EA+ +LK+ + G P SY ++
Sbjct: 384 VIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKS-MAACGCRPNTISYTIVL 442
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
KGLC + +A + ++M+ +G P+ ++ I+ K+G VE A L K+M N
Sbjct: 443 KGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLN 499
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 7/243 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ ++ GF +EG ++ + MA GC P+ SY++++ C R +AE L
Sbjct: 398 PDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDL 457
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M ++ + V +NT+I C+ G + +A E ++M L+G +++ +++G +
Sbjct: 458 MSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGK 517
Query: 365 AGDVDSAILVYNDMCRKGFEPEG---STIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
AG D A+ + N M KG P S+I + + RV + D ++ ++
Sbjct: 518 AGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIR----S 573
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y +I LC+ G + A++ A MV G P+ Y+ I G EG V+ A +
Sbjct: 574 DAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEML 633
Query: 482 KEM 484
E+
Sbjct: 634 TEL 636
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 6/258 (2%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR--- 297
V V PN +T+ ++ G V EM R GC P Y V++ C
Sbjct: 109 VPVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGG 168
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG-EMARAEEFFREMGLS-GVESSSVTF 355
R A ++ +++ + DV N ++ C+ G + A R++ S G + V++
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
++ G C A + +M R G P T LIG LC + +FE + + A++V
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLC-RNGLFERVHQVLAQMV 287
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G P + Y ++ G+C+EG +E A ++ M G +P++ Y+ + G E
Sbjct: 288 DHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWE 347
Query: 476 MATMLRKEMFENQVRQED 493
A L EMF+N +D
Sbjct: 348 QAEELLAEMFDNDCPLDD 365
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ +++ ++ G + G ++ ++ M G P+ YS + + +E R+ ++
Sbjct: 503 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQM 562
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ ++D + D V YN +I C+ G RA EF M SG + T+ L+ G
Sbjct: 563 FDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLAS 622
Query: 365 AGDVDSAILVYNDMCRKG 382
G V A + ++C KG
Sbjct: 623 EGFVKEAQEMLTELCSKG 640
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 194/404 (48%), Gaps = 47/404 (11%)
Query: 106 SSYATIIHILSRARLIGPARDVIRVALRSPEN--DPKLKLFEVLVKTYRECGSAPFVFDL 163
+++ T+I+ L L G + + R EN P + + +V G FD+
Sbjct: 159 TTFNTLINGLC---LEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDM 215
Query: 164 LIKCCLEVKNIEK-----------------IETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
L K +E +N++ I+ + + + + ++G+ V T N+L+ +
Sbjct: 216 LRK--MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 207 SRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
+ G + +++ V R + PNV TFN L+ F +EG ++
Sbjct: 274 CKAGKWNDGALLLKDM--------------VSR--EIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+++ EM G P+ +Y+ LM +C + R+ EA + + M D+V + ++I G
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
+C + + + FR + G+ +++VT+ LV G+C++G + A ++ +M G P+
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 387 GSTIEVLIGELCDKRRVFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
T +L+ LCD ++ +AL+I L+ + G+ Y +I+G+C+ GK+E+A
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV----MYTTIIEGMCKGGKVEDAW 493
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ + KG +P++ Y+ I G K+G++ A +L ++M E+
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 1/224 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ TFN L+ G EG K + M GC+PD +Y+ ++ C A +
Sbjct: 156 PDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDM 215
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M ++NV+ DV Y+TII C G + A F+EM G++SS VT+ LV G C+
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG + L+ DM + P T VL+ + ++ EA ++ K + + G+ P
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNII 334
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+Y L+ G C + ++ EA + MV P + +++ I GY
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 124/243 (51%), Gaps = 1/243 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N++T N ++ F R V ++ +LG EPD +++ L+ C E ++ +A L
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLV 181
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M + + D+V YN+I+ G C G+ + A + R+M V++ T+ +++ CR
Sbjct: 182 DRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G +D+AI ++ +M KG + T L+ LC + + +LK V + + P +
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVIT 300
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+ L+ +EGK++EA ++ EM+ +G P++ Y+ +DGY + + A + M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 486 ENQ 488
N+
Sbjct: 361 RNK 363
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 79/150 (52%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
N T++ L+ GF + G + E+++ EM G PD +Y +L+ C+ ++ +A ++
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E+++ ++ +V Y TII G C+ G++ A F + GV+ + +T+ +++G C+
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
G + A ++ M G P T LI
Sbjct: 521 KGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 7/224 (3%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
++ EM R P +S + ++ +++ + H++ N +I FC
Sbjct: 75 LFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ A ++ G E + TF L+NG C G V A+++ + M G +P+
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMV 194
Query: 389 TIEVLIGELC---DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
T ++ +C D F+ L ++ R VK +F +Y +I LC +G ++ A+ +
Sbjct: 195 TYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVF----TYSTIIDSLCRDGCIDAAISL 250
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EM KG + S+ Y++ + G K G +L K+M ++
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 78/155 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+ L+ G G EK +++ ++ + + Y+ ++ C+ ++ +A
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ + K V+ +V+ Y +I G C+ G ++ A R+M G + T+ L+ +
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
R GD+ ++ + +M GF + S+I+++I L
Sbjct: 554 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 377 DMCRK----GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
D C++ G T+ ++I C + A +L +V+K G P ++ LI G
Sbjct: 109 DFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL-GKVMKLGYEPDTTTFNTLING 167
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
LC EGK+ +A+ + MV G +P + Y++ ++G + G+ +A + ++M E V+ +
Sbjct: 168 LCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKAD 227
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 199/418 (47%), Gaps = 46/418 (11%)
Query: 114 ILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY---RECGSAPFVFDLLIKCCLE 170
+L +R G +R I +L + P+ ++F++L++TY R+ A F LL+ +
Sbjct: 60 LLRMSRRRGASRREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVP 119
Query: 171 VKNIEKIETCV------------DIVRMLMSRGLSVKVSTCNALI------WEVSRGKGV 212
V + R+++S V T N ++ E + V
Sbjct: 120 VPASASNALLAALSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTV 179
Query: 213 ISGYE---IYREVFG----LDSDATAGIGKDVKRVVRV---------RPNVHTFNALMVG 256
IS E ++ +V +D+ AG DV + + +P + TFN+++ G
Sbjct: 180 ISEMEKRCVFPDVVTHNVLIDARFRAG---DVDAAIALVDSMANKGLKPGIVTFNSVLKG 236
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
+ F+K ++V+ M + PD S+++L+ FC + EA K ++EM+ + V D
Sbjct: 237 LCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPD 296
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
VV+++ +IG F G+M A + REM G+ V + ++ G+CRAG + A+ V +
Sbjct: 297 VVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRD 356
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
+M G P+ T L+ LC + R+ +A ++L + + G+ P ++ LI G C +
Sbjct: 357 EMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLN-EMKERGVTPDLCTFTTLIHGYCRD 415
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT-----MLRKEMFENQV 489
G E+AL++ ++ + P + Y++ IDG ++G++ A M +E+F N V
Sbjct: 416 GNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHV 473
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 154/351 (43%), Gaps = 58/351 (16%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
++ + +V + ++GL + T N+++ + + + E++R +D + A
Sbjct: 208 VDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFR---AMDQCSVA----- 259
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
P+V +FN L+ GF R G E+ + EM + G PD S+S L+ +F
Sbjct: 260 --------PDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRG 311
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA-------------------- 336
+M A EM+ + D V Y +IGGFC G M+ A
Sbjct: 312 KMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYN 371
Query: 337 ---------------EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
EE EM GV TF L++GYCR G+ + A+ +++ + +
Sbjct: 372 TLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQ 431
Query: 382 GFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
P+ LI +C D + E D + AR + FP +Y LI CE+G+
Sbjct: 432 RLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREI----FPNHVTYSILIDSHCEKGQ 487
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+EEA EMV KG P++ Y++ I GY + GNV+ ++M ++ +
Sbjct: 488 VEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNI 538
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 163/341 (47%), Gaps = 28/341 (8%)
Query: 153 ECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS-RG 209
+C AP V F++LI V +E+ + + + RG++ V + + LI S RG
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVEE---AMKFYKEMQQRGVTPDVVSFSCLIGLFSTRG 311
Query: 210 KGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDV 269
K D A +++K + V P+ + ++ GF R G+ + V
Sbjct: 312 K----------------MDHAAAYLREMKGLGLV-PDGVIYTMVIGGFCRAGSMSEALRV 354
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
EM LGC PD +Y+ L+ C++ R+ +AE+L EM+++ V D+ + T+I G+C
Sbjct: 355 RDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCR 414
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G +A + F + + V + L++G CR GD+ A +++DM + P T
Sbjct: 415 DGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVT 474
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
+LI C+K +V EA L V K G P +Y +IKG C G +++ + +M
Sbjct: 475 YSILIDSHCEKGQVEEAFGFLDEMVSK-GNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKM 533
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMA----TMLRKEMFE 486
+ P L ++ I GY+KE N+ A ++ KEM +
Sbjct: 534 MQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQ 574
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 167/356 (46%), Gaps = 27/356 (7%)
Query: 158 PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
P VFDLLI+ + + K + R+L+ + V S NAL+ +SR E
Sbjct: 87 PQVFDLLIRTYTQSR---KPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEE 143
Query: 218 IYREVFGLDSDATAG---------------------IGKDVKRVVRVRPNVHTFNALMVG 256
YR V DS+ A I + KR V P+V T N L+
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVF--PDVVTHNVLIDA 201
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
+R G + + MA G +P +++ ++ C+ RR +A++++ M +V D
Sbjct: 202 RFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPD 261
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
V ++N +IGGFC +GE+ A +F++EM GV V+F L+ + G +D A
Sbjct: 262 VRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLR 321
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
+M G P+G ++IG C + EAL + + +V G P +Y L+ GLC++
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV-RDEMVGLGCLPDVVTYNTLLNGLCKQ 380
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
++ +A ++ EM +G P L ++ I GY ++GN E A L + ++R +
Sbjct: 381 HRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPD 436
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 122/254 (48%), Gaps = 7/254 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P++ TF L+ G+ R+G FEK ++ + PD +Y+ L+ C + + +A
Sbjct: 398 VTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKAN 457
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+LW++M + + + V Y+ +I CE G++ A F EM G + +T+ ++ GY
Sbjct: 458 ELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGY 517
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV---FEALDILKARVVKFGL 419
CR+G+V M + P+ T LI + + F +I++ +V+
Sbjct: 518 CRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQ--- 574
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y +I G E+G MEEA +V +M G EP Y + I+G++ GN + A
Sbjct: 575 -PDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQ 633
Query: 480 LRKEMFENQVRQED 493
L EM +D
Sbjct: 634 LHDEMMHRGFAPDD 647
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 117/216 (54%), Gaps = 1/216 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+RP+V +N+L+ G R+G K ++W +M P+ +YS+L+ CE+ ++ EA
Sbjct: 432 RLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEA 491
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+EM K +++ YN+II G+C G + + ++F ++M + +TF L++G
Sbjct: 492 FGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHG 551
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
Y + ++ A V+N M ++ +P+ T ++I ++ + EA + K ++ G+ P
Sbjct: 552 YIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFK-KMGASGIEP 610
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+YM LI G G +EA ++ EM+ +GF P
Sbjct: 611 DRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 196/423 (46%), Gaps = 40/423 (9%)
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR------VALRSPEND 138
PH ALR F + + + + +S A ++ L+++R+ AR V VA+ + +
Sbjct: 218 PHDALRVFDHMRAREVVPDAHASSA-LLTALAKSRMTATARKVFDQMTRAGVAMNTHVYN 276
Query: 139 PKLK---------LFEVLVKTYRECGSAP---FVFDLLIKCCLEVKNIEKIETCVDIVRM 186
L L E L+ T + P F F+ +I K ++ CV
Sbjct: 277 AMLHVCLKAGDAALAESLM-TRMDAAGVPLDRFSFNTVIALYCR-KGMQYEAMCVR--ER 332
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+ ++G+ V T N+LI + + + V ++ RE+ A AG+ P+
Sbjct: 333 MENQGVKADVVTWNSLIHGLCKERRVKEASQLLREM------AMAGVA----------PD 376
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
T+ L+ G+ R G E+ + EM +G P +Y+ ++ CE+ +M+E L
Sbjct: 377 HVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLN 436
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
EM ++ V+ D V NT+I +C+ G+M A + R M SG++ T++ LV+G+C+A
Sbjct: 437 EMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAK 496
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++D A +M GF P S + ++ LC+K L I ++K G P + Y
Sbjct: 497 ELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAI-PDELMKRGFPPDKAVY 555
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI+ LC++G ++ A V EM GKG E +Y+ Y+ G A + EM +
Sbjct: 556 RSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAK 615
Query: 487 NQV 489
Q+
Sbjct: 616 KQL 618
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD ++ S L+ + R A K++++M V + YN ++ + G+ A AE
Sbjct: 235 PDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCLKAGDAALAESL 294
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
M +GV +F ++ YCR G A+ V M +G + + T LI LC
Sbjct: 295 MTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCK 354
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+RRV EA +L+ + G+ P +Y L+ G C G +EEA+K++ EM G P +
Sbjct: 355 ERRVKEASQLLREMAMA-GVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVA 413
Query: 460 IYSAFI-----DGYMKEGNVEMATMLRKEMFENQVRQE 492
Y+A + DG MKE NV L EM E +V+ +
Sbjct: 414 TYNAILRKLCEDGKMKEVNV-----LLNEMDERKVQAD 446
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 128/239 (53%), Gaps = 1/239 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV+ FN L+ GF + G K D++ M R PDC SY+ ++ C+ +R+ EA++L+
Sbjct: 128 NVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELF 187
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM+ + + V ++ +I GFC+ G++ EM G+E + L++G+C
Sbjct: 188 KEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSK 247
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
GD++ ++N+M RK P T L+ LC K++ EA +L + + P +
Sbjct: 248 GDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDT-MTGCKVRPDVVA 306
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y L GL + G+ +A+KV MV +G EP+ Y+A I+G KEG V+ A + + M
Sbjct: 307 YTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETM 365
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 178/352 (50%), Gaps = 25/352 (7%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+ F+LL+K + + K +D+ M+ L + N +I + +GK ++ E+
Sbjct: 130 YNFNLLLKGFCQSGDSHK---AMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKEL 186
Query: 219 YREV------------------FGLDSDATAGIG--KDVKRVVRVRPNVHTFNALMVGFY 258
++E+ F + D G G ++++++ + +V ++AL+ GF
Sbjct: 187 FKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKM-GLEGDVFVYSALISGFC 245
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+G E+ ++++ EM R P+ +YS LM C++++ +EA ++ + M V DVV
Sbjct: 246 SKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVV 305
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
AY + G + G + A + M G E ++VT+ ++NG C+ G VD A+ + M
Sbjct: 306 AYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETM 365
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK-FGLFPTEKSYMFLIKGLCEEG 437
+KG +P+ T L+ LC ++ EA+D+L + K F + P ++ +I+ LC++
Sbjct: 366 AKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQR 425
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ A +V MV +GF ++ Y+ IDGY+ G + A L K+ ++ +
Sbjct: 426 RLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGI 477
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 189/433 (43%), Gaps = 45/433 (10%)
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL 143
+ H A+ F + L +S Y T+I+ L + + + A+++ + ++ E P
Sbjct: 144 DSHKAMDLFCMMKRNCLIPDCVS-YNTVINGLCKGKRLVEAKELFK-EMKGGECKPNSVT 201
Query: 144 FEVLVKTYRECGSAP------------------FVFDLLIKCCLEVKNIEKIETCVDIVR 185
F L+ + + G FV+ LI +IE+ + ++
Sbjct: 202 FSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGK---ELFN 258
Query: 186 MLMSRGLSVKVSTCNALI--------W-EVSRGKGVISGYEIYREVFGL----DSDATAG 232
++ + ++ V T + L+ W E ++ ++G ++ +V D + G
Sbjct: 259 EMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNG 318
Query: 233 IGKDVKRVVRV------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
D +V+ + PN T+NA++ G +EG + + MA+ G +PD +YS
Sbjct: 319 RASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYS 378
Query: 287 VLMAVFCEERRMREAEKLWEEMRDK--NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
L+ C ++ EA L + K +++ DV A+N +I C+ + A+ + M
Sbjct: 379 TLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMV 438
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G S+ VT+ L++GY AG + A+ ++ D G P +T VLI LC + +
Sbjct: 439 ERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLS 498
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
A + + G PT Y L+ LC E +E+A + EM +P + ++
Sbjct: 499 IAKGLFNKKRAS-GTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNII 557
Query: 465 IDGYMKEGNVEMA 477
IDG +K G+VE A
Sbjct: 558 IDGTLKAGDVESA 570
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 130/282 (46%), Gaps = 36/282 (12%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVW-VEMAR-LGCEPDCYSYSVLMAVFCEERRMREA 301
+P+V T++ L+ G G ++ D+ + M++ +PD +++++++ C++RR+R A
Sbjct: 371 KPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHA 430
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++++ M ++ ++V YN +I G+ G++ +A E +++ SG+ ++ T+ L+NG
Sbjct: 431 KRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLING 490
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK--------AR 413
C+ + A ++N G P S L+ LC + V +A ++ +
Sbjct: 491 LCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPD 550
Query: 414 VVKFGLF--------------------------PTEKSYMFLIKGLCEEGKMEEALKVQA 447
VV F + P ++ LI + G+++EA +
Sbjct: 551 VVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYE 610
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
MV G P ++ + + GY +G E + ++M + V
Sbjct: 611 RMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDV 652
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 130/282 (46%), Gaps = 21/282 (7%)
Query: 174 IEKIETCVDIVRMLMSRGLSVK--VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA 231
+ KI+ VD++ +LMS+ +K V N +I E+ + + + +Y +
Sbjct: 387 VGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTM--------- 437
Query: 232 GIGKDVKRVVRVRP-NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
V R P N+ T+N L+ G+ G K ++W + G P+ +Y+VL+
Sbjct: 438 --------VERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLIN 489
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C+ + + A+ L+ + R V YNT++ C + +A F+EM + +
Sbjct: 490 GLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDP 549
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
V+F +++G +AGDV+SA + +M P+ T +LI ++ EA +
Sbjct: 550 DVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLY 609
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
+ R+V G P + L+KG +GK E+ + + +M K
Sbjct: 610 E-RMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADK 650
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 122/296 (41%), Gaps = 52/296 (17%)
Query: 197 STCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVG 256
S+CN LI + + K Y V + S + V V P + +AL+
Sbjct: 60 SSCNTLIDNLRKAKH-------YDHVISVHSKMAS---------VSVFPCFTSLSALIES 103
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
F V + + G + Y++++L+ FC+ +A L+ M+ + D
Sbjct: 104 FVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPD 163
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
V+YNT+I G C+ + A+E F+EM + +SVTF L++G+C+ GDV+ +
Sbjct: 164 CVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLE 223
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
+M + G E + VF Y LI G C +
Sbjct: 224 EMEKMGLEGD----------------VF--------------------VYSALISGFCSK 247
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
G +E ++ EM+ K P++ YS ++ K+ + A + M +VR +
Sbjct: 248 GDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPD 303
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 112/271 (41%), Gaps = 22/271 (8%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI--------------- 203
F F+L+I+ E+ ++ + ++ RG + T N LI
Sbjct: 412 FAFNLVIQ---ELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALEL 468
Query: 204 WEVSRGKGVISGYEIYREVF-GLDSDATAGIGKDV---KRVVRVRPNVHTFNALMVGFYR 259
W+ + G+ Y + GL I K + KR RP V +N LM R
Sbjct: 469 WKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCR 528
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
E + E+ +++ EM +PD S+++++ + + A++L EM + N+ D +
Sbjct: 529 ESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNIT 588
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
++ +I F ++G++ A + M G +V F+ L+ GY G + + + M
Sbjct: 589 FSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMA 648
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
K + ++ LC+ + + IL
Sbjct: 649 DKDVVLDSKLTSTILACLCNMSKDVDIEKIL 679
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 135/253 (53%), Gaps = 10/253 (3%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V T+NAL+ F +EG F + E+++ EM G P+ +YS ++ FC++ R+ A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
E ++ M K +++ +NT+I G+C + E EM +G+ + + T+ L++G
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK---------- 411
+ GD+++A+ + +M G P+ T + L+ LCD ++ +AL++ K
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
A G+ P ++Y LI GL EGK EA ++ EM +G P YS+ IDG K+
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Query: 472 GNVEMATMLRKEM 484
++ AT + M
Sbjct: 560 SRLDEATQMFDSM 572
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 132/259 (50%), Gaps = 1/259 (0%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
D+ + + + ++ V + PNV ++A++ ++G ++++ EM G PD ++Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ ++ FC R +AE+L +EM ++ + DVV YN +I F + G+ AEE + EM
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G+ +++T+ +++G+C+ +D+A ++ M KG P T LI C +R+ +
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+++L + + GL +Y LI G G + AL + EM+ G P + +
Sbjct: 414 GMELLH-EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472
Query: 466 DGYMKEGNVEMATMLRKEM 484
DG G ++ A + K M
Sbjct: 473 DGLCDNGKLKDALEMFKVM 491
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 125/238 (52%), Gaps = 5/238 (2%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ + +D+++ ++S GL + TC+ L+ + + E+++ + D A
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS- 501
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
V P+V T+N L+ G EG F + E+++ EM G PD +YS ++ C
Sbjct: 502 ----HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
++ R+ EA ++++ M K+ +VV + T+I G+C+ G + E F EMG G+ ++++
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
T+ L+ G+ + G+++ A+ ++ +M G P+ TI ++ L K + A+ +L+
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 154/353 (43%), Gaps = 63/353 (17%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+++ ++ R +S V T NALI + E+Y E+ GI
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML------PRGI--------- 356
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN T+++++ GF ++ + E ++ MA GC P+ +++ L+ +C +R+ +
Sbjct: 357 -IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM + + D YNT+I GF +G++ A + +EM SG+ VT + L++G
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Query: 363 CRAG-----------------DVDSA--------------ILV---------------YN 376
C G D+D++ IL+ Y
Sbjct: 476 CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE 535
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
+M +G P+ T +I LC + R+ EA + + K P ++ LI G C+
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK-SFSPNVVTFTTLINGYCKA 594
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G++++ L++ EM +G + Y I G+ K GN+ A + +EM + V
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 117/251 (46%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P+V F LM R + V ++ +M R D YS+++L+ FC ++ A
Sbjct: 74 RPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFA 133
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ ++ + DVV +NT++ G C ++ A F +M + + VTF L+NG
Sbjct: 134 LSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNG 193
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
CR G + A+ + + M G +P T ++ +C K AL++L+ + P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y +I LC++G+ +A + EM KG P L Y++ I G+ G A L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313
Query: 482 KEMFENQVRQE 492
+EM E ++ +
Sbjct: 314 QEMLERKISPD 324
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 139/345 (40%), Gaps = 38/345 (11%)
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
F +L+K + C PF K I K+ GL V T N L+
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGK-------ITKL-------------GLHPDVVTFNTLL 156
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
+ V ++ ++F RPNV TF LM G REG
Sbjct: 157 HGLCVEDRVSEALNLFHQMFE----------------TTCRPNVVTFTTLMNGLCREGRI 200
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD-KNVEHDVVAYNT 322
+ + M G +P +Y ++ C++ A L +M + ++ +VV Y+
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSA 260
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
II C+ G + A+ F EM G+ T+ ++ G+C +G A + +M +
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
P+ T LI + + FEA ++ + + G+ P +Y +I G C++ +++ A
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ M KG P+L ++ IDGY ++ L EM E
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET 424
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 139/301 (46%), Gaps = 41/301 (13%)
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAG--------IGK 235
++ ++G S + T N LI K + G E+ E+ GL +D T +
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444
Query: 236 DVKRVVRVR---------PNVHTFNALMVGFYREGAFEKVEDVWVEMARL---------- 276
D+ + + P++ T + L+ G G + +++ M +
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504
Query: 277 -GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G EPD +Y++L++ E + EAE+L+EEM + + D + Y+++I G C+ +
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A + F MG + VTF L+NGYC+AG VD + ++ +M R+G T LI
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI- 623
Query: 396 ELCDKRRVFE---ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL----KVQAE 448
C R+V ALDI + ++ G++P + ++ GL + +++ A+ K+Q
Sbjct: 624 --CGFRKVGNINGALDIFQ-EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680
Query: 449 M 449
M
Sbjct: 681 M 681
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 2/238 (0%)
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L GF+ E D++ +M R P + LM V R L+++M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ D+ ++ +I FC ++ A F ++ G+ VTF L++G C V A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+++ M P T L+ LC + R+ EA+ +L R+++ GL PT+ +Y ++ G
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD-RMMEDGLQPTQITYGTIVDG 228
Query: 433 LCEEGKMEEALKVQAEMVG-KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+C++G AL + +M P++ IYSA ID K+G A L EM E +
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 135/253 (53%), Gaps = 10/253 (3%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V T+NAL+ F +EG F + E+++ EM G P+ +YS ++ FC++ R+ A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
E ++ M K +++ +NT+I G+C + E EM +G+ + + T+ L++G
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK---------- 411
+ GD+++A+ + +M G P+ T + L+ LCD ++ +AL++ K
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
A G+ P ++Y LI GL EGK EA ++ EM +G P YS+ IDG K+
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Query: 472 GNVEMATMLRKEM 484
++ AT + M
Sbjct: 560 SRLDEATQMFDSM 572
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 132/259 (50%), Gaps = 1/259 (0%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
D+ + + + ++ V + PNV ++A++ ++G ++++ EM G PD ++Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ ++ FC R +AE+L +EM ++ + DVV YN +I F + G+ AEE + EM
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G+ +++T+ +++G+C+ +D+A ++ M KG P T LI C +R+ +
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+++L + + GL +Y LI G G + AL + EM+ G P + +
Sbjct: 414 GMELLH-EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472
Query: 466 DGYMKEGNVEMATMLRKEM 484
DG G ++ A + K M
Sbjct: 473 DGLCDNGKLKDALEMFKVM 491
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 125/238 (52%), Gaps = 5/238 (2%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ + +D+++ ++S GL + TC+ L+ + + E+++ + D A
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS- 501
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
V P+V T+N L+ G EG F + E+++ EM G PD +YS ++ C
Sbjct: 502 ----HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
++ R+ EA ++++ M K+ +VV + T+I G+C+ G + E F EMG G+ ++++
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
T+ L+ G+ + G+++ A+ ++ +M G P+ TI ++ L K + A+ +L+
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 154/353 (43%), Gaps = 63/353 (17%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+++ ++ R +S V T NALI + E+Y E+ GI
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML------PRGI--------- 356
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN T+++++ GF ++ + E ++ MA GC P+ +++ L+ +C +R+ +
Sbjct: 357 -IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM + + D YNT+I GF +G++ A + +EM SG+ VT + L++G
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Query: 363 CRAG-----------------DVDSA--------------ILV---------------YN 376
C G D+D++ IL+ Y
Sbjct: 476 CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE 535
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
+M +G P+ T +I LC + R+ EA + + K P ++ LI G C+
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK-SFSPNVVTFTTLINGYCKA 594
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G++++ L++ EM +G + Y I G+ K GN+ A + +EM + V
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 116/251 (46%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P+V F LM R + V ++ +M R D YS+++L+ FC ++ A
Sbjct: 74 RPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFA 133
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ ++ + DVV + T++ G C ++ A F +M + + VTF L+NG
Sbjct: 134 LSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNG 193
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
CR G + A+ + + M G +P T ++ +C K AL++L+ + P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y +I LC++G+ +A + EM KG P L Y++ I G+ G A L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313
Query: 482 KEMFENQVRQE 492
+EM E ++ +
Sbjct: 314 QEMLERKISPD 324
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 2/245 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPNV TF LM G REG + + M G +P +Y ++ C++ A
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240
Query: 304 LWEEMRD-KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +M + ++ +VV Y+ II C+ G + A+ F EM G+ T+ ++ G+
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +G A + +M + P+ T LI + + FEA ++ + + G+ P
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPN 359
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I G C++ +++ A + M KG P+L ++ IDGY ++ L
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419
Query: 483 EMFEN 487
EM E
Sbjct: 420 EMTET 424
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 139/301 (46%), Gaps = 41/301 (13%)
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAG--------IGK 235
++ ++G S + T N LI K + G E+ E+ GL +D T +
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444
Query: 236 DVKRVVRVR---------PNVHTFNALMVGFYREGAFEKVEDVWVEMARL---------- 276
D+ + + P++ T + L+ G G + +++ M +
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504
Query: 277 -GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G EPD +Y++L++ E + EAE+L+EEM + + D + Y+++I G C+ +
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A + F MG + VTF L+NGYC+AG VD + ++ +M R+G T LI
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI- 623
Query: 396 ELCDKRRVFE---ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL----KVQAE 448
C R+V ALDI + ++ G++P + ++ GL + +++ A+ K+Q
Sbjct: 624 --CGFRKVGNINGALDIFQ-EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680
Query: 449 M 449
M
Sbjct: 681 M 681
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 2/238 (0%)
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L GF+ E D++ +M R P + LM V R L+++M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ D+ ++N +I FC ++ A F ++ G+ VTF L++G C V A+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+++ M P T L+ LC + R+ EA+ +L R+++ GL PT+ +Y ++ G
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD-RMMEDGLQPTQITYGTIVDG 228
Query: 433 LCEEGKMEEALKVQAEMVG-KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+C++G AL + +M P++ IYSA ID K+G A L EM E +
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 135/253 (53%), Gaps = 10/253 (3%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V T+NAL+ F +EG F + E+++ EM G P+ +YS ++ FC++ R+ A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
E ++ M K +++ +NT+I G+C + E EM +G+ + + T+ L++G
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK---------- 411
+ GD+++A+ + +M G P+ T + L+ LCD ++ +AL++ K
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
A G+ P ++Y LI GL EGK EA ++ EM +G P YS+ IDG K+
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Query: 472 GNVEMATMLRKEM 484
++ AT + M
Sbjct: 560 SRLDEATQMFDSM 572
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 132/259 (50%), Gaps = 1/259 (0%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
D+ + + + ++ + + PNV ++A++ ++G ++++ EM G PD ++Y
Sbjct: 234 DTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ ++ FC R +AE+L +EM ++ + DVV YN +I F + G+ AEE + EM
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G+ +++T+ +++G+C+ +D+A ++ M KG P T LI C +R+ +
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+++L + + GL +Y LI G G + AL + EM+ G P + +
Sbjct: 414 GMELLH-EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472
Query: 466 DGYMKEGNVEMATMLRKEM 484
DG G ++ A + K M
Sbjct: 473 DGLCDNGKLKDALEMFKVM 491
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 125/238 (52%), Gaps = 5/238 (2%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ + +D+++ ++S GL + TC+ L+ + + E+++ + D A
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS- 501
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
V P+V T+N L+ G EG F + E+++ EM G PD +YS ++ C
Sbjct: 502 ----HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
++ R+ EA ++++ M K+ +VV + T+I G+C+ G + E F EMG G+ ++++
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
T+ L+ G+ + G+++ A+ ++ +M G P+ TI ++ L K + A+ +L+
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 154/353 (43%), Gaps = 63/353 (17%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+++ ++ R +S V T NALI + E+Y E+ GI
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML------PRGI--------- 356
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN T+++++ GF ++ + E ++ MA GC P+ +++ L+ +C +R+ +
Sbjct: 357 -IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM + + D YNT+I GF +G++ A + +EM SG+ VT + L++G
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Query: 363 CRAG-----------------DVDSA--------------ILV---------------YN 376
C G D+D++ IL+ Y
Sbjct: 476 CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE 535
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
+M +G P+ T +I LC + R+ EA + + K P ++ LI G C+
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK-SFSPNVVTFTTLINGYCKA 594
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G++++ L++ EM +G + Y I G+ K GN+ A + +EM + V
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P+V F LM R + V ++ +M R D YS+++L+ FC ++ A
Sbjct: 74 RPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFA 133
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ ++ + DVV +NT++ G C ++ A F +M + + VTF L+NG
Sbjct: 134 LSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNG 193
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
CR G + A+ + + M G +P T ++ +C ALD+L+ + P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIP 253
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y +I LC++G+ +A + EM KG P L Y++ I G+ G A L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313
Query: 482 KEMFENQVRQE 492
+EM E ++ +
Sbjct: 314 QEMLERKISPD 324
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 138/345 (40%), Gaps = 38/345 (11%)
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
F +L+K + C PF K I K+ GL V T N L+
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGK-------ITKL-------------GLHPDVVTFNTLL 156
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
+ V ++ ++F RPNV TF LM G REG
Sbjct: 157 HGLCVEDRVSEALNLFHQMFE----------------TTCRPNVVTFTTLMNGLCREGRI 200
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD-KNVEHDVVAYNT 322
+ + M G +P +Y ++ C+ A L +M + ++ +VV Y+
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSA 260
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
II C+ G + A+ F EM G+ T+ ++ G+C +G A + +M +
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
P+ T LI + + FEA ++ + + G+ P +Y +I G C++ +++ A
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ M KG P+L ++ IDGY ++ L EM E
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET 424
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 139/301 (46%), Gaps = 41/301 (13%)
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAG--------IGK 235
++ ++G S + T N LI K + G E+ E+ GL +D T +
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444
Query: 236 DVKRVVRVR---------PNVHTFNALMVGFYREGAFEKVEDVWVEMARL---------- 276
D+ + + P++ T + L+ G G + +++ M +
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504
Query: 277 -GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G EPD +Y++L++ E + EAE+L+EEM + + D + Y+++I G C+ +
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A + F MG + VTF L+NGYC+AG VD + ++ +M R+G T LI
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI- 623
Query: 396 ELCDKRRVFE---ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL----KVQAE 448
C R+V ALDI + ++ G++P + ++ GL + +++ A+ K+Q
Sbjct: 624 --CGFRKVGNINGALDIFQ-EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680
Query: 449 M 449
M
Sbjct: 681 M 681
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 2/238 (0%)
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L GF+ E D++ +M R P + LM V R L+++M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ D+ ++ +I FC ++ A F ++ G+ VTF L++G C V A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+++ M P T L+ LC + R+ EA+ +L R+++ GL PT+ +Y ++ G
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD-RMMEDGLQPTQITYGTIVDG 228
Query: 433 LCEEGKMEEALKVQAEMVG-KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+C+ G AL + +M P++ IYSA ID K+G A L EM E +
Sbjct: 229 MCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 194/456 (42%), Gaps = 43/456 (9%)
Query: 37 QSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFT- 95
+ +L + L+ R S H L +TP ++ L N LA RFF +
Sbjct: 34 DASDLAKRLCKLIISCRKASAVEHELDHSGVRVTPEVAERVLERLDNAGMLAYRFFEWAR 93
Query: 96 -QHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYREC 154
Q + C H++ SY T++ L++ R DV VA+ E ++ F ++++ Y
Sbjct: 94 RQKRGGCAHTVRSYHTVVASLAKIRQYQLMWDV--VAVMRKEGVANVETFSIIMRKYARA 151
Query: 155 GSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVIS 214
+K + V ++ G++ ++ N+L+ + + K V
Sbjct: 152 --------------------QKFDEAVYTFNIMERYGVAHNLAAFNSLLGALCKSKNVRK 191
Query: 215 GYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
EI+ ++ R P+ T++ L+ G+ R K+ +V+ +M
Sbjct: 192 AQEIFDKMNN-----------------RFSPDAKTYSILLEGWGRAPNLPKMREVYSDML 234
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
GC+PD +Y +++ C+ R+ EA + ++M + + Y+ ++ + +
Sbjct: 235 AAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIE 294
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
A F +M G+ V + LV +C+ D+A V +DM G P T +++
Sbjct: 295 DAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNIIL 354
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
L + EA + + + + P +Y +IK CE K+E ALKV M K F
Sbjct: 355 NTLISLGKDDEAYRVFRNMIKRCK--PDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQF 412
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
PS+ +S I+G +G V A +L ++M E +R
Sbjct: 413 LPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIR 448
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN T+N ++ G ++ V+ M + C+PD +Y++++ +FCE ++ A
Sbjct: 343 ISPNSRTWNIILNTLISLGKDDEAYRVFRNMIK-RCKPDSDTYTMMIKMFCENDKIEMAL 401
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
K+W+ MR K + ++ +I G C+ GE+++A +M G+ TF L
Sbjct: 402 KVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKL 457
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 135/253 (53%), Gaps = 10/253 (3%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V T+NAL+ F +EG F + E+++ EM G P+ +YS ++ FC++ R+ A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
E ++ M K +++ +NT+I G+C + E EM +G+ + + T+ L++G
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK---------- 411
+ GD+++A+ + +M G P+ T + L+ LCD ++ +AL++ K
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
A G+ P ++Y LI GL EGK EA ++ EM +G P YS+ IDG K+
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Query: 472 GNVEMATMLRKEM 484
++ AT + M
Sbjct: 560 SRLDEATQMFDSM 572
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 132/259 (50%), Gaps = 1/259 (0%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
D+ + + + ++ V + PNV ++A++ ++G ++++ EM G PD ++Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ ++ FC R +AE+L +EM ++ + DVV YN +I F + G+ AEE + EM
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G+ +++T+ +++G+C+ +D+A ++ M KG P T LI C +R+ +
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+++L + + GL +Y LI G G + AL + EM+ G P + +
Sbjct: 414 GMELLH-EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472
Query: 466 DGYMKEGNVEMATMLRKEM 484
DG G ++ A + K M
Sbjct: 473 DGLCDNGKLKDALEMFKVM 491
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 125/238 (52%), Gaps = 5/238 (2%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ + +D+++ ++S GL + TC+ L+ + + E+++ + D A
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS- 501
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
V P+V T+N L+ G EG F + E+++ EM G PD +YS ++ C
Sbjct: 502 ----HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
++ R+ EA ++++ M K+ +VV + T+I G+C+ G + E F EMG G+ ++++
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
T+ L+ G+ + G+++ A+ ++ +M G P+ TI ++ L K + A+ +L+
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 154/353 (43%), Gaps = 63/353 (17%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+++ ++ R +S V T NALI + E+Y E+ GI
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML------PRGI--------- 356
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN T+++++ GF ++ + E ++ MA GC P+ +++ L+ +C +R+ +
Sbjct: 357 -IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM + + D YNT+I GF +G++ A + +EM SG+ VT + L++G
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Query: 363 CRAG-----------------DVDSA--------------ILV---------------YN 376
C G D+D++ IL+ Y
Sbjct: 476 CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE 535
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
+M +G P+ T +I LC + R+ EA + + K P ++ LI G C+
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK-SFSPNVVTFTTLINGYCKA 594
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G++++ L++ EM +G + Y I G+ K GN+ A + +EM + V
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 117/251 (46%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P+V F LM R + V ++ +M R D YS+++L+ FC ++ A
Sbjct: 74 RPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFA 133
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ ++ + DVV +NT++ G C ++ A F +M + + VTF L+NG
Sbjct: 134 LSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNG 193
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
CR G + A+ + + M G +P T ++ +C K AL++L+ + P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y +I LC++G+ +A + EM KG P L Y++ I G+ G A L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313
Query: 482 KEMFENQVRQE 492
+EM E ++ +
Sbjct: 314 QEMLERKISPD 324
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 151/362 (41%), Gaps = 23/362 (6%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
++ V +R D + L++ + + C + F +LIKC + K+ +
Sbjct: 85 LMGVVVRMERPDLVISLYQKMERKQIRCDI--YSFTILIKC---FCSCSKLPFALSTFGK 139
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
L GL V T N L+ + V ++ ++F RPN
Sbjct: 140 LTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE----------------TTCRPN 183
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V TF LM G REG + + M G +P +Y ++ C++ A L
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243
Query: 307 EMRD-KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M + ++ +VV Y+ II C+ G + A+ F EM G+ T+ ++ G+C +
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G A + +M + P+ T LI + + FEA ++ + + G+ P +
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTIT 362
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I G C++ +++ A + M KG P+L ++ IDGY ++ L EM
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422
Query: 486 EN 487
E
Sbjct: 423 ET 424
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 139/301 (46%), Gaps = 41/301 (13%)
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAG--------IGK 235
++ ++G S + T N LI K + G E+ E+ GL +D T +
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444
Query: 236 DVKRVVRVR---------PNVHTFNALMVGFYREGAFEKVEDVWVEMARL---------- 276
D+ + + P++ T + L+ G G + +++ M +
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504
Query: 277 -GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G EPD +Y++L++ E + EAE+L+EEM + + D + Y+++I G C+ +
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A + F MG + VTF L+NGYC+AG VD + ++ +M R+G T LI
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI- 623
Query: 396 ELCDKRRVFE---ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL----KVQAE 448
C R+V ALDI + ++ G++P + ++ GL + +++ A+ K+Q
Sbjct: 624 --CGFRKVGNINGALDIFQ-EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680
Query: 449 M 449
M
Sbjct: 681 M 681
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 2/238 (0%)
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L GF+ E D++ +M R P + LM V R L+++M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ D+ ++ +I FC ++ A F ++ G+ VTF L++G C V A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+++ M P T L+ LC + R+ EA+ +L R+++ GL PT+ +Y ++ G
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD-RMMEDGLQPTQITYGTIVDG 228
Query: 433 LCEEGKMEEALKVQAEMVG-KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+C++G AL + +M P++ IYSA ID K+G A L EM E +
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 200/434 (46%), Gaps = 39/434 (8%)
Query: 69 LTPTQFSQI--ALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARD 126
L+P+QF Q+ ++GLK NP L FF F + + ++ SY T+I +L R++ I PAR
Sbjct: 71 LSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIRSKFIPPARL 130
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPF-------------VFDLLIKC-CLEVK 172
++ + N P L L K + E +A F FDLLI + +
Sbjct: 131 LLIRLIDG--NLPVLNLDSE--KFHIEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQFR 186
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
N+ VD+ +L +G + TCN L+ + + + +E EVF + S+
Sbjct: 187 NL-GFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKA----NEFEKCCEVFRVMSEGAC- 240
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
P+V +F ++ + G E +++++M +LG P+ +Y+ ++
Sbjct: 241 ------------PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGL 288
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C+ R+ A +L E+M K V+ ++ Y +I G ++ + EM SG +
Sbjct: 289 CQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNV 348
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
V F +L++GYC+ G+++ A+ + + M K P T+ L+ C ++ A + L+
Sbjct: 349 VVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALE- 407
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
++ GL + ++ LC++ + A + M+ + F PS + + + G K+G
Sbjct: 408 EILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDG 467
Query: 473 NVEMATMLRKEMFE 486
AT L + E
Sbjct: 468 KHLEATELWFRLLE 481
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+NAL++GF EG E + EM + G +PD Y+Y+ L+ C ++ +A KLW+E
Sbjct: 525 TYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEF 584
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + ++ Y ++ G+C+ + E F E+ +E +S+ + ++ +C+ G+V
Sbjct: 585 KASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNV 644
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+A+ + +M KG P +T LI +C+ V +A ++ + K G P Y
Sbjct: 645 AAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLID-EMRKEGFVPNVVCYTA 703
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI G C+ G+M+ A EM+ P+ Y+ IDGY K GN+E A L +M E+
Sbjct: 704 LIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESG 763
Query: 489 V 489
+
Sbjct: 764 I 764
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 141/302 (46%), Gaps = 17/302 (5%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
IV+ ++ RGL + T NALI V + + E+ KR
Sbjct: 510 IVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM--------------TKR--G 553
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+++T+N L+ G G + +W E G + ++Y ++M +C+ R+ + E
Sbjct: 554 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVE 613
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ E+ K +E + + YN II C+ G +A A + M G+ + T+ L++G
Sbjct: 614 NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGV 673
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G V+ A + ++M ++GF P LIG C K + + ++ F + P
Sbjct: 674 CNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYC-KLGQMDTAESTWLEMISFNIHPN 732
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ +Y +I G C+ G ME+A + +M G P + Y+ +G+ K +++ A +
Sbjct: 733 KFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCD 792
Query: 483 EM 484
+M
Sbjct: 793 QM 794
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 181/417 (43%), Gaps = 40/417 (9%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
+L +Y +I+ L + V+ + S N P + +F L+ Y + G+ L
Sbjct: 312 NLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFN-PNVVVFNNLIDGYCKMGNIEGA--L 368
Query: 164 LIKCCLEVKNI-----------------EKIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
IK + KNI ++IE + + ++S GLS+ C +++ +
Sbjct: 369 KIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWL 428
Query: 207 SRGKGVISGYEIYREVFG--------LDSDATAGIGKDVKRVVRVR-----------PNV 247
+ S + + + L + G+ KD K + +
Sbjct: 429 CKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASK 488
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
T NAL+ G G + + EM G D +Y+ L+ FC E ++ +L EE
Sbjct: 489 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 548
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M + ++ D+ YN ++ G C +G++ A + + E SG+ S+ T+ ++ GYC+A
Sbjct: 549 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 608
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
++ ++N++ K E ++I C V AL +L+ K G+ P +Y
Sbjct: 609 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK-GILPNCATYS 667
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LI G+C G +E+A + EM +GF P++ Y+A I GY K G ++ A EM
Sbjct: 668 SLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM 724
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 109/249 (43%), Gaps = 2/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T N L+ + FEK +V+ M+ C PD +S++ ++ C+ +M A +L
Sbjct: 207 PSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKMENAIEL 265
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M + +VV YN II G C+ G + A E +M + GV+ + T+ L+NG +
Sbjct: 266 FMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIK 325
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D V ++M GF P LI C + AL I + K + PT
Sbjct: 326 LNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISK-NITPTSV 384
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ L++G C+ ++E A E++ G + + + K+ A K M
Sbjct: 385 TLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMM 444
Query: 485 FENQVRQED 493
R D
Sbjct: 445 LSRNFRPSD 453
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN T+++L+ G G E + + EM + G P+ Y+ L+ +C+ +M AE
Sbjct: 659 ILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAE 718
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
W EM N+ + Y +I G+C++G M +A +M SG+ VT+ L NG+
Sbjct: 719 STWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGF 778
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+A D+D+A V + M +G + T L+
Sbjct: 779 CKANDMDNAFKVCDQMATEGLPVDEITYTTLV 810
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 203 IWEVSRGKGVISGYEIYREVF------GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVG 256
+ E + KG++ Y + GL DA I D R PNV + AL+ G
Sbjct: 650 LLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLI--DEMRKEGFVPNVVCYTALIGG 707
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
+ + G + E W+EM P+ ++Y+V++ +C+ M +A L +M++ + D
Sbjct: 708 YCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPD 767
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
VV YN + GFC+ +M A + +M G+ +T+ LV+G+
Sbjct: 768 VVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 135/253 (53%), Gaps = 10/253 (3%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V T+NAL+ F +EG F + E+++ EM G P+ +YS ++ FC++ R+ A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
E ++ M K +++ +NT+I G+C + E EM +G+ + + T+ L++G
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK---------- 411
+ GD+++A+ + +M G P+ T + L+ LCD ++ +AL++ K
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
A G+ P ++Y LI GL EGK EA ++ EM +G P YS+ IDG K+
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Query: 472 GNVEMATMLRKEM 484
++ AT + M
Sbjct: 560 SRLDEATQMFDSM 572
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 132/259 (50%), Gaps = 1/259 (0%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
D+ + + + ++ V + PNV ++A++ ++G ++++ EM G PD ++Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ ++ FC R +AE+L +EM ++ + DVV YN +I F + G+ AEE + EM
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G+ +++T+ +++G+C+ +D+A ++ M KG P T LI C +R+ +
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+++L + + GL +Y LI G G + AL + EM+ G P + +
Sbjct: 414 GMELLH-EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472
Query: 466 DGYMKEGNVEMATMLRKEM 484
DG G ++ A + K M
Sbjct: 473 DGLCDNGKLKDALEMFKVM 491
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 125/238 (52%), Gaps = 5/238 (2%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ + +D+++ ++S GL + TC+ L+ + + E+++ + D A
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS- 501
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
V P+V T+N L+ G EG F + E+++ EM G PD +YS ++ C
Sbjct: 502 ----HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
++ R+ EA ++++ M K+ +VV + T+I G+C+ G + E F EMG G+ ++++
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
T+ L+ G+ + G+++ A+ ++ +M G P+ TI ++ L K + A+ +L+
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 154/353 (43%), Gaps = 63/353 (17%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+++ ++ R +S V T NALI + E+Y E+ GI
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML------PRGI--------- 356
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN T+++++ GF ++ + E ++ MA GC P+ +++ L+ +C +R+ +
Sbjct: 357 -IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM + + D YNT+I GF +G++ A + +EM SG+ VT + L++G
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Query: 363 CRAG-----------------DVDSA--------------ILV---------------YN 376
C G D+D++ IL+ Y
Sbjct: 476 CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE 535
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
+M +G P+ T +I LC + R+ EA + + K P ++ LI G C+
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK-SFSPNVVTFTTLINGYCKA 594
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G++++ L++ EM +G + Y I G+ K GN+ A + +EM + V
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 118/251 (47%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P+V F LM R + V ++ +M R D YS+++L+ FC ++ A
Sbjct: 74 RPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFA 133
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ ++ + DVV + T++ G C ++ A +FF +M + + VTF L+NG
Sbjct: 134 LSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNG 193
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
CR G + A+ + + M G +P T ++ +C K AL++L+ + P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y +I LC++G+ +A + EM KG P L Y++ I G+ G A L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313
Query: 482 KEMFENQVRQE 492
+EM E ++ +
Sbjct: 314 QEMLERKISPD 324
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 2/245 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPNV TF LM G REG + + M G +P +Y ++ C++ A
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240
Query: 304 LWEEMRD-KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +M + ++ +VV Y+ II C+ G + A+ F EM G+ T+ ++ G+
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +G A + +M + P+ T LI + + FEA ++ + + G+ P
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPN 359
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I G C++ +++ A + M KG P+L ++ IDGY ++ L
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419
Query: 483 EMFEN 487
EM E
Sbjct: 420 EMTET 424
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 139/301 (46%), Gaps = 41/301 (13%)
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAG--------IGK 235
++ ++G S + T N LI K + G E+ E+ GL +D T +
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444
Query: 236 DVKRVVRVR---------PNVHTFNALMVGFYREGAFEKVEDVWVEMARL---------- 276
D+ + + P++ T + L+ G G + +++ M +
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504
Query: 277 -GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G EPD +Y++L++ E + EAE+L+EEM + + D + Y+++I G C+ +
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A + F MG + VTF L+NGYC+AG VD + ++ +M R+G T LI
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI- 623
Query: 396 ELCDKRRVFE---ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL----KVQAE 448
C R+V ALDI + ++ G++P + ++ GL + +++ A+ K+Q
Sbjct: 624 --CGFRKVGNINGALDIFQ-EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680
Query: 449 M 449
M
Sbjct: 681 M 681
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 2/238 (0%)
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L GF+ E D++ +M R P + LM V R L+++M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ D+ ++N +I FC ++ A F ++ G+ VTF L++G C V A+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
++ M P T L+ LC + R+ EA+ +L R+++ GL PT+ +Y ++ G
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD-RMMEDGLQPTQITYGTIVDG 228
Query: 433 LCEEGKMEEALKVQAEMVG-KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+C++G AL + +M P++ IYSA ID K+G A L EM E +
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 131/241 (54%), Gaps = 1/241 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN++T+ L+ GF ++G E+ + EM G + Y+ L++ C+ ++ EA
Sbjct: 414 KPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALD 473
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ EM K + D+ +N++I G C + EM A +R+M L GV ++SVTF L++ +
Sbjct: 474 MFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFL 533
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G++ A+ + NDM +G + T LI LC V + L + + + K GL P+
Sbjct: 534 RRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRK-GLTPSI 592
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+ LI G C GK+ AL+ +M+ +GF P + Y++ I+G K G ++ A L ++
Sbjct: 593 ITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEK 652
Query: 484 M 484
+
Sbjct: 653 L 653
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TF+ L+ G ++G F ++ +M GC+P+ +Y++L+ FC++ ++ EA +
Sbjct: 380 PDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLI 439
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM K + V YN +I C+ G++ A + F EM G + TF L+ G CR
Sbjct: 440 LREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCR 499
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+++ A+ +Y DM +G T LI + + EAL ++ + + G E
Sbjct: 500 VDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFR-GCPLDEI 558
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LIK LC+ G +E+ L + EM+ KG PS+ + I+G+ G V A ++M
Sbjct: 559 TYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDM 618
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 172/373 (46%), Gaps = 38/373 (10%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+++T+++ L + L G A +++ + + P L + +L+ + + G
Sbjct: 384 TFSTLVNGLCKKGLFGSALELVN-DMDAKGCKPNLNTYTILIDGFCKKG----------- 431
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
++E I+R ++++G S+ NALI + + + +++ E+
Sbjct: 432 ---------QLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEM---- 478
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
++ G +P++ TFN+L+ G R E ++ +M G + +++
Sbjct: 479 --SSKG----------CKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFN 526
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L+ F ++EA KL +M + D + YN +I C+ G + + F EM
Sbjct: 527 TLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRK 586
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+ S +T L+NG+C AG V +A+ DM +GF P+ T LI LC + R+ EA
Sbjct: 587 GLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEA 646
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L++ + ++ G+ P +Y LI LC EG ++A + V GF P+ ++ +
Sbjct: 647 LNLFE-KLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVY 705
Query: 467 GYMKEGNVEMATM 479
+ K+ N E T+
Sbjct: 706 NFGKQSNSEGQTI 718
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 4/243 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN +TF +M + + +M + GC P+ Y L+ + R+ EA
Sbjct: 206 VSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEAL 265
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL EEM DV +NT+I GFC + + + M L G + +T+ +L++G
Sbjct: 266 KLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGL 325
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ +D A + K P L+ R+ EA + +++ G P
Sbjct: 326 CKTCRIDEA----QALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPD 381
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ L+ GLC++G AL++ +M KG +P+L Y+ IDG+ K+G +E A ++ +
Sbjct: 382 VFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILR 441
Query: 483 EMF 485
EM
Sbjct: 442 EML 444
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 119/241 (49%), Gaps = 2/241 (0%)
Query: 245 PNVHTFNALMVGFYREGAF-EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
PNV FN L+ GF R G E V+ +M G PD +++S L+ C++ A +
Sbjct: 344 PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +M K + ++ Y +I GFC+ G++ A REM G ++V + L++ C
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALC 463
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G + A+ ++ +M KG +P+ T LI LC + +AL + + V++ G+
Sbjct: 464 KHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLE-GVIANS 522
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++ LI G+++EALK+ +M+ +G Y+ I K G VE L +E
Sbjct: 523 VTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEE 582
Query: 484 M 484
M
Sbjct: 583 M 583
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 10/176 (5%)
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
H Y +I + +M G+ F ++ Y RAG A +
Sbjct: 102 HSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRL 161
Query: 375 YNDM-----CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
DM C F ++VL+ C D+L G+ P + ++ +
Sbjct: 162 LLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSK-----GVSPNDYTFGLV 216
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+K LC +++ A + +M G P+ IY ID K V+ A L +EMF
Sbjct: 217 MKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMF 272
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 134/243 (55%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN+L+ G+ + G ++VE + EM R GC+ D +Y+ L+ FC+ RM A
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGY 280
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M+ + V +VV ++T + FC+ G + A + F +M + G+ + T+ L++G C+
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG +D AI++ ++M R+G T VL+ LC +R+V EA D+L+ + K G+ E
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM-MEKAGVRANEL 399
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G E+AL + +EM KG E + +Y A I G ++ A L +M
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459
Query: 485 FEN 487
E+
Sbjct: 460 DES 462
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 127/247 (51%), Gaps = 1/247 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV T+ L+ G +E + EDV M + G + Y+ L+ + +A L
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM++K +E D+ Y +I G C + ++ A+ +M SG+E + + + +++ ++
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G V AI + + GF+P T LI LC + EA+ ++ GL P ++
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFN-KMRDLGLDPNVQA 540
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y L+ GLC+ G + EA+++ EMV KG +Y+A +DGY+K+GN+ A L+ +M
Sbjct: 541 YTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMI 600
Query: 486 ENQVRQE 492
++ ++ +
Sbjct: 601 DSGLQLD 607
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 138/270 (51%), Gaps = 7/270 (2%)
Query: 224 GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
GL DA + + R +RV PN T N +++ R+ + V ++ ++ P+ +
Sbjct: 136 GLLDDAVRAVAR--VRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP----APNVF 189
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
++++++ C+E + EA L+ M++ DVV +N++I G+ + GE+ E+ EM
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
SG ++ VT+ L+N +C+ G +++A + M R+G T + C + V
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
EA+ + V+ G+ E +Y LI G C+ G++++A+ + EMV +G ++ Y+
Sbjct: 310 REAMKLFAQMRVR-GMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+DG KE V A + + M + VR +
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANE 398
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 1/239 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ + AL+ G ++ + + +M G EP+ Y+ +M + ++ EA +
Sbjct: 432 DISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAML 491
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+++ D + +V+ Y +I G C+ G + A F +M G++ + + LV+G C+
Sbjct: 492 QKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKN 551
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G ++ A+ ++N+M KG + L+ + + +A LKA+++ GL
Sbjct: 552 GCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAF-ALKAKMIDSGLQLDLFC 610
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y I G C M EA +V +EM+G G P +Y+ I Y K GN+E A L+ EM
Sbjct: 611 YTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 126/235 (53%), Gaps = 1/235 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V NV TF+ + F +EG + ++ +M G + ++Y+ L+ C+ R+ +A
Sbjct: 289 VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAI 348
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM + V +VV Y ++ G C+ ++A AE+ R M +GV ++ + + L++G+
Sbjct: 349 VLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGH 408
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ + A+ + ++M KG E + S LI LC+ ++ EA +L ++ + GL P
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLL-TKMDESGLEPN 467
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
Y ++ + GK+ EA+ + +++ GF+P++ Y A IDG K G+++ A
Sbjct: 468 YIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEA 522
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 27/249 (10%)
Query: 137 NDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSV 194
N KL + L+ E G P ++ ++ C + K+ + +++ ++ G
Sbjct: 445 NVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSG---KVPEAIAMLQKILDSGFQP 501
Query: 195 KVSTCNALIWEVSRGKGV---ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFN 251
V T ALI + + + IS + R++ GLD PNV +
Sbjct: 502 NVITYCALIDGLCKAGSIDEAISHFNKMRDL-GLD------------------PNVQAYT 542
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
AL+ G + G + ++ EM G D Y+ L+ + ++ + +A L +M D
Sbjct: 543 ALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDS 602
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
++ D+ Y I GFC + M A E F EM G+ + L++ Y + G+++ A
Sbjct: 603 GLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEA 662
Query: 372 ILVYNDMCR 380
I + ++M R
Sbjct: 663 ISLQDEMER 671
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 134/243 (55%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN+L+ G+ + G ++VE + EM R GC+ D +Y+ L+ FC+ RM A
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGY 280
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M+ + V +VV ++T + FC+ G + A + F +M + G+ + T+ L++G C+
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG +D AI++ ++M R+G T VL+ LC +R+V EA D+L+ + K G+ E
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM-MEKAGVRANEL 399
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G E+AL + +EM KG E + +Y A I G ++ A L +M
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459
Query: 485 FEN 487
E+
Sbjct: 460 DES 462
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 140/272 (51%), Gaps = 23/272 (8%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V NV TF+ + F +EG + ++ +M G + ++Y+ L+ C+ R+ +A
Sbjct: 289 VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAI 348
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM + V +VV Y ++ G C+ ++A AE+ R M +GV ++ + + L++G+
Sbjct: 349 VLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGH 408
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ + A+ + ++M KG E + S LI LC+ ++ EA +L ++ + GL P
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLL-TKMDESGLEPN 467
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP--------------------SLE--I 460
Y ++ + GK+ EA+ + +++ GF+P SL+ +
Sbjct: 468 YIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVV 527
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
Y+A +DGY+K+GN+ A L+ +M ++ ++ +
Sbjct: 528 YTALLDGYLKQGNLHDAFALKAKMIDSGLQLD 559
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 21/241 (8%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV T+ L+ G +E + EDV M + G + Y+ L+ + +A L
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM++K +E D+ Y +I G C + ++ A+ +M SG+E + + + +++ ++
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIE---VLIGELCDK-----RRVFEALD--------- 408
G V AI + + GF+P + L E+ K + V+ AL
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 541
Query: 409 ----ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
LKA+++ GL Y I G C M EA +V +EM+G G P +Y+
Sbjct: 542 HDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCL 601
Query: 465 I 465
I
Sbjct: 602 I 602
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 43/101 (42%)
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G + ++ EM G D Y+ L+ + ++ + +A L +M D ++ D+
Sbjct: 503 NGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFC 562
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
Y I GFC + M A E F EM G+ + L+
Sbjct: 563 YTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLIT 603
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/180 (18%), Positives = 74/180 (41%), Gaps = 22/180 (12%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR-------- 297
++ + AL+ G ++ + + +M G EP+ Y+ +M + +
Sbjct: 432 DISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAML 491
Query: 298 --------------MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+ EA +L+ EM K + D V Y ++ G+ + G + A +M
Sbjct: 492 QKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKM 551
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
SG++ + ++G+C + A V+++M G P+ + LI ++ + R +
Sbjct: 552 IDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLITQIPEIREL 611
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 182/394 (46%), Gaps = 44/394 (11%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C+ + +Y TII+ L + A +++ + P + + ++ ++R+
Sbjct: 199 CRPDVYTYTTIINGLCKIGETAAAAGLLK-KMEEAGCQPNVVTYSTIIDSHRK------- 250
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
++ +DI + +G+S + T N+LI + + ++
Sbjct: 251 -------------DRRVNEALDIFSYMKVKGISPDIFTYNSLIQG-------LCNFSQWK 290
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
E L ++ R + + P++ TFN L+ +EG + + V M +G EP
Sbjct: 291 EASALLNEM---------RSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEP 341
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D +YS LM + + EA KL++ M K + DV +YN +I G+C++ + A++ F
Sbjct: 342 DVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLF 401
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
EM G+ ++V++ L++G C+ G + A ++ +M G P T +L+ C +
Sbjct: 402 NEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQ 461
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+A + +A + P Y LI +C+ G + +A K+ +E+ KG +P+ +I
Sbjct: 462 GYFGKAFRLFRAMQSTYSK-PNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQI 520
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
Y+ I+G KEG ++ A E F N +EDG
Sbjct: 521 YTTIINGLCKEGLLDEAL----EAFRNM--EEDG 548
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 151/344 (43%), Gaps = 24/344 (6%)
Query: 147 LVKTYRECGSAPFVFDL--LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI- 203
L K G +P ++ L LI C ++++++ ++ ++ GL + T LI
Sbjct: 120 LTKQMELAGLSPNIYTLSILINC---FSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLIN 176
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
W GK + + L D A RP+V+T+ ++ G + G
Sbjct: 177 WLCKVGK--------FAQAMELFDDMVAR---------GCRPDVYTYTTIINGLCKIGET 219
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
+ +M GC+P+ +YS ++ ++RR+ EA ++ M+ K + D+ YN++
Sbjct: 220 AAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSL 279
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I G C + A EM + VTF LV+ C+ G V A V M G
Sbjct: 280 IQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGV 339
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
EP+ T L+ + V EA + A + K G P SY LI G C+ +++EA
Sbjct: 340 EPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK-GCKPDVFSYNILINGYCKVKRIDEAK 398
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++ EM+ +G P+ Y+ I G + G++ A L K M N
Sbjct: 399 QLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTN 442
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 114/243 (46%), Gaps = 2/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAF-EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
P + F L+ + G + + V + +M G P+ Y+ S+L+ F +R+ A
Sbjct: 95 PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFS 154
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ ++ ++ +V + T+I C++G+ A+A E F +M G T+ ++NG C
Sbjct: 155 VLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLC 214
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G+ +A + M G +P T +I RRV EALDI VK G+ P
Sbjct: 215 KIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVK-GISPDI 273
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI+GLC + +EA + EM P + ++ +D KEG V A + K
Sbjct: 274 FTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKT 333
Query: 484 MFE 486
M E
Sbjct: 334 MTE 336
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 113/242 (46%), Gaps = 21/242 (8%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
KLF+ ++ + C F +++LI +VK I++ + + ++ +GL+ + N
Sbjct: 364 KLFDAMIT--KGCKPDVFSYNILINGYCKVKRIDEAK---QLFNEMIHQGLTPNNVSYNT 418
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
LI + + + +++ + T G PN+ T++ L+ GF ++G
Sbjct: 419 LIHGLCQLGSLREARNLFKNMH------TNG----------NLPNLFTYSILLDGFCKQG 462
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
F K ++ M +P+ Y++L+ C+ +R+A KL+ E+ K ++ + Y
Sbjct: 463 YFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYT 522
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
TII G C+ G + A E FR M G +++ ++ G+ D A+ + +M K
Sbjct: 523 TIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDK 582
Query: 382 GF 383
GF
Sbjct: 583 GF 584
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 93/230 (40%), Gaps = 38/230 (16%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
A + F+ H+ L +++S Y T+IH L + + AR++ + + + N P L + +L
Sbjct: 397 AKQLFNEMIHQGLTPNNVS-YNTLIHGLCQLGSLREARNLFK-NMHTNGNLPNLFTYSIL 454
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
+ + + G F L R + S + N LI +
Sbjct: 455 LDGFCKQGYFGKAFRLF--------------------RAMQSTYSKPNLVMYNILIDAMC 494
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
+ + +++ E+F V ++PN + ++ G +EG ++
Sbjct: 495 KSGNLRDARKLFSELF----------------VKGLQPNAQIYTTIINGLCKEGLLDEAL 538
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ + M GC PD SY+V++ F + A +L EMRDK DV
Sbjct: 539 EAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADV 588
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 131/243 (53%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+V T+N LM G+ +K + V+ M+ +G PD ++Y++L+ FC+ + + EA
Sbjct: 548 VKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEAL 607
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++EM KN+ D V Y++++ G C+ G ++ + EM G + +T+ L++G
Sbjct: 608 NLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGL 667
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G +D AI ++N M +G P T +L+ LC R+ +A ++ + + K G
Sbjct: 668 CKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTK-GYHLD 726
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y +I G C++G +EEAL + ++M G P+ + I+ K+ + A L +
Sbjct: 727 VYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLR 786
Query: 483 EMF 485
+M
Sbjct: 787 QMI 789
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 146/307 (47%), Gaps = 45/307 (14%)
Query: 216 YEIYREVFGLDSDATA-GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
Y++ E +GL S+ T GI DV T++ L+ GF G ++ + EM
Sbjct: 460 YQLVSEAYGLFSEMTVKGISADVV----------TYSTLIYGFCIVGKLKEAIGLLNEMV 509
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
PD +Y++L+ +E +++EA+ + M V+ DV YNT++ G+ + E+
Sbjct: 510 LKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVK 569
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
+A+ F M L GV T+ L+NG+C++ VD A+ ++ +M +K P+ T L+
Sbjct: 570 KAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLV 629
Query: 395 GELCDKRRVFEALDILK--------ARVVKF--------------------------GLF 420
LC R+ D++ A V+ + G+
Sbjct: 630 DGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIR 689
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P ++ L+ GLC+ G++++A +V +++ KG+ + IY+ I G+ K+G +E A +
Sbjct: 690 PNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTM 749
Query: 481 RKEMFEN 487
+M EN
Sbjct: 750 LSKMEEN 756
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 156/353 (44%), Gaps = 27/353 (7%)
Query: 159 FVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI------WEVSRG-- 209
F ++LI C C ++ +I ++ ++ RG T N LI +V +
Sbjct: 343 FTLNILINCFC----HMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALH 398
Query: 210 ---KGVISGYEIYREVFGLDSDATAGIGKDVKRVVRV---------RPNVHTFNALMVGF 257
K + G+++ + + + IG D + +++ +PNV ++ ++
Sbjct: 399 FHDKLLAQGFQLNQVSYATLINGVCKIG-DTRGAIKLLRKIDGRLTKPNVEMYSTIIDAL 457
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ + ++ EM G D +YS L+ FC +++EA L EM K + DV
Sbjct: 458 CKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDV 517
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
Y ++ + G++ A+ M + V+ T+ L+NGY +V A V+N
Sbjct: 518 RTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNA 577
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
M G P+ T +LI C + V EAL++ K K + P +Y L+ GLC+ G
Sbjct: 578 MSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQK-NMVPDTVTYSSLVDGLCKSG 636
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
++ + EM +G + Y++ IDG K G+++ A L +M + +R
Sbjct: 637 RISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIR 689
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 35/284 (12%)
Query: 243 VRPNVHTFNALMVGF------------YREG---------AFEKVEDVWVEMA------- 274
V P+VH++N ++ GF ++E F K+ D + +M
Sbjct: 269 VTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVS 328
Query: 275 ---RL---GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
RL G +PD ++ ++L+ FC ++ + ++ + V NT+I G C
Sbjct: 329 LSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLC 388
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
G++ +A F ++ G + + V++ L+NG C+ GD AI + + + +P
Sbjct: 389 LKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVE 448
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
+I LC + V EA + VK G+ +Y LI G C GK++EA+ + E
Sbjct: 449 MYSTIIDALCKYQLVSEAYGLFSEMTVK-GISADVVTYSTLIYGFCIVGKLKEAIGLLNE 507
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
MV K P + Y+ +D KEG V+ A + M + V+ +
Sbjct: 508 MVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPD 551
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 153/379 (40%), Gaps = 61/379 (16%)
Query: 152 RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS---- 207
++C S PF ++N++ + ++ ++ RG T N LI +
Sbjct: 26 KDCDSPPFFLPP------SIQNVDD-AVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQ 78
Query: 208 -------RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR---------VRPNVHTFN 251
K + G+++ + + + IG D + ++ +PNV +N
Sbjct: 79 VKEALHFHDKLLAQGFQLNQVSYATLINGVCRIG-DTRAAIKFLRKIDGRLAKPNVEMYN 137
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
++ + + ++ EM G + +YS L+ FC +++EA L M K
Sbjct: 138 TIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLK 197
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
+ +V YN ++ C+ G++ A+ M + V+S+ +T+ L++GY +V A
Sbjct: 198 TINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKA 257
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK-------ARVVKF------- 417
V+N M G P+ + ++I C +RV +AL++ K +++F
Sbjct: 258 QHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSF 317
Query: 418 -------------------GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
G+ P + LI C G++ V A+++ +G+ PS
Sbjct: 318 AKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPST 377
Query: 459 EIYSAFIDGYMKEGNVEMA 477
+ I G +G V+ A
Sbjct: 378 VTLNTLIKGLCLKGQVKKA 396
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
D V NT+I G C G++ A F ++ G + + V++ L+NG CR GD +AI
Sbjct: 62 DTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFL 121
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
+ + +P +I LC + V EA + VK G+ +Y LI G C
Sbjct: 122 RKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVK-GISANVVTYSTLIYGFCI 180
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
GK++EAL + MV K P++ Y+ +D KEG V+ A + M + V+
Sbjct: 181 VGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSN 237
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 35/209 (16%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+VHT+ L+ GF + ++ +++ EM + PD +YS L+ C+ R+
Sbjct: 583 VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVW 642
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG- 361
L +EMRD+ DV+ YN++I G C+ G + +A F +M G+ ++ TF L++G
Sbjct: 643 DLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGL 702
Query: 362 ----------------------------------YCRAGDVDSAILVYNDMCRKGFEPEG 387
+C+ G ++ A+ + + M G P
Sbjct: 703 CKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNA 762
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVK 416
T +++I L K +A +L+ + +
Sbjct: 763 VTFDIIINALFKKDENDKAEKLLRQMIAR 791
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
Query: 242 RVRP-NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
R +P +V T+N+L+ G + G +K ++ +M G P+ +++++L+ C+ R+++
Sbjct: 651 RGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKD 710
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A+++++++ K DV YN +I G C+ G + A +M +G ++VTF+ ++N
Sbjct: 711 AQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIIN 770
Query: 361 GYCRAGDVDSAILVYNDMCRKGF 383
+ + D A + M +G
Sbjct: 771 ALFKKDENDKAEKLLRQMIARGL 793
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+++K G P + LIKGLC +G+++EAL +++ +GF+ + Y+ I+G +
Sbjct: 52 TKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRI 111
Query: 472 GNVEMAT-MLRK 482
G+ A LRK
Sbjct: 112 GDTRAAIKFLRK 123
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 129/246 (52%), Gaps = 1/246 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ PNV + N ++ +EG + DV M + G EPD +Y+ LM C M EA
Sbjct: 226 KIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEA 285
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+++ M +VV+YNT+I G+C+I + +A F EM + +++T+ L++G
Sbjct: 286 VKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHG 345
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C G + AI ++N+M G P T +L+ LC R+ EA+ +LKA + L P
Sbjct: 346 LCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKA-IEGSNLDP 404
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ Y I G+C G +E A + + + +G +P + ++ I G K G ++ A+ L
Sbjct: 405 DVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLF 464
Query: 482 KEMFEN 487
+EM EN
Sbjct: 465 REMDEN 470
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 149/314 (47%), Gaps = 21/314 (6%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ KI +D+ ++ G V T L+ + + + + ++ E+ I
Sbjct: 139 VGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEM----------I 188
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
K + P++ T+N+L+ ++ V + EM + P+ S ++++ C
Sbjct: 189 AKGIS------PDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALC 242
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+E ++ EA + + M VE DVV Y ++ G C EM A + F M +G + V
Sbjct: 243 KEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVV 302
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
++ L+NGYC+ +D A+ ++ +MCR+ P T LI LC R+ +A+ +
Sbjct: 303 SYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFN-E 361
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+V G P +Y L+ LC+ ++ EA+ + + G +P +++Y+ IDG + G+
Sbjct: 362 MVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGD 421
Query: 474 VEMATMLRKEMFEN 487
+E A +++F N
Sbjct: 422 LEAA----RDLFSN 431
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 121/276 (43%), Gaps = 36/276 (13%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ TF L+ G G + DV+ +M G +P+ +Y LM C++R++ EA
Sbjct: 123 QPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALN 182
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS----------------- 346
L+ EM K + D+ YN++I C + E EM S
Sbjct: 183 LFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALC 242
Query: 347 ------------------GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
GVE VT+ L++G+C ++D A+ V++ M R G
Sbjct: 243 KEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVV 302
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
+ LI C +R+ +A+ + + + + L P +Y LI GLC G++++A+ + E
Sbjct: 303 SYNTLINGYCKIQRIDKAMYLFE-EMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNE 361
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
MV G P+L YS +D K + A L K +
Sbjct: 362 MVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAI 397
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 116/243 (47%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + F L+ + + V + +M G PD Y+ ++++ FC R+ A +
Sbjct: 54 PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ + D + T++ G C +G++ A + F +M G + + VT+ L+NG C+
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ A+ ++++M KG P+ T LI LC+ ++ + L +VK + P
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCE-WKHVTTLLNEMVKSKIMPNVV 232
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
S ++ LC+EGK+ EA V M+ G EP + Y+A +DG+ ++ A + M
Sbjct: 233 SLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMM 292
Query: 485 FEN 487
N
Sbjct: 293 VRN 295
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 123/250 (49%), Gaps = 5/250 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V+T ++ F + V ++ +LG +PD +++ L+ C ++ EA
Sbjct: 87 IPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEAL 146
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++++M + + +VV Y T++ G C+ ++ A F EM G+ T+ L++
Sbjct: 147 DVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHAL 206
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C + + N+M + P ++ +++ LC + +V EA D++ +++ G+ P
Sbjct: 207 CNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDM-MIQGGVEPD 265
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G C +M+EA+KV MV G ++ Y+ I+GY K ++ A L
Sbjct: 266 VVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYL-- 323
Query: 483 EMFENQVRQE 492
FE RQE
Sbjct: 324 --FEEMCRQE 331
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 2/200 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T++ L+ G G + ++ EM G P+ +YS+L+ C+ R+ EA L
Sbjct: 334 PNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMAL 393
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + N++ DV YN I G C G++ A + F + G++ T ++ G C+
Sbjct: 394 LKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCK 453
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +D A ++ +M G G T + L + A+ +L+ + + G
Sbjct: 454 RGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLAR-GFSADVS 512
Query: 425 SYMFLIKGLCEEGKMEEALK 444
+ L+K L ++G +++++K
Sbjct: 513 TTALLVKMLSDDG-LDQSVK 531
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 127/249 (51%), Gaps = 2/249 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P V TFN LM G + + MA+ G PD Y+Y M C+ R+++A
Sbjct: 275 VPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAV 334
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++EEMR++ V + V + T+I C+ G +A E REM G+++ V + L NG
Sbjct: 335 EMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGL 394
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR D+ +A + +M G +P+ T LI C + + A++ +K + G+
Sbjct: 395 CRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAME-MKQEMSDEGVALD 453
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E +Y LI GL + G+ ++ ++ EM+ G EP Y+ ID + K +V+ L K
Sbjct: 454 EVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLK 513
Query: 483 EMFENQVRQ 491
EM +N+ R+
Sbjct: 514 EM-QNKGRK 521
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 144/296 (48%), Gaps = 20/296 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+I+ V++ + RG++ LI + V +G E++RE+ AT GI
Sbjct: 329 RIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREM------ATRGIKT 382
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ +NAL G R + D+ EM G +PD +Y+ L+ FC+E
Sbjct: 383 DLV----------AYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKE 432
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ A ++ +EM D+ V D V Y T+I G + G +E EM +G+E + T+
Sbjct: 433 GELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTY 492
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++ +C+ DV + + +M KG +P T V++ C ++ A D+L ++
Sbjct: 493 TMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNA-DMLLNAML 551
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
G+ P + +Y L+ G C+ GK+ +A ++++ KG +Y++ I+ ++K+
Sbjct: 552 NIGVCPDDITYNILLDGHCKHGKVRDAEELKS---AKGMVSDFGLYTSLINEFVKK 604
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 136/302 (45%), Gaps = 18/302 (5%)
Query: 181 VDIVRMLMSR-GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
+ +R LM++ G++ V T A + + + + E++ E+ R
Sbjct: 298 ANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEM----------------R 341
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V PN F L+ +EG ++ EMA G + D +Y+ L C R ++
Sbjct: 342 ERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLK 401
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
A + EEMR+ ++ D V Y T+I GFC+ GE+ A E +EM GV VT+ L+
Sbjct: 402 AANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLI 461
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+G ++G + + +M G EP+ +T ++I C V +LK K G
Sbjct: 462 SGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNK-GR 520
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y ++ G C G+M+ A + M+ G P Y+ +DG+ K G V A
Sbjct: 521 KPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEE 580
Query: 480 LR 481
L+
Sbjct: 581 LK 582
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 36/247 (14%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P FN LM R G +++ EM R G P +++ LM+ C+ + A
Sbjct: 240 VPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSAN 299
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L M V DV Y + G C+ G + A E F EM GV ++V F L++ +
Sbjct: 300 ALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAH 359
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G+V + + ++ +M +G +K +V
Sbjct: 360 CKEGNVAAGLELHREMATRG---------------------------IKTDLV------- 385
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L GLC ++ A + EM G +P Y+ IDG+ KEG ++MA +++
Sbjct: 386 --AYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQ 443
Query: 483 EMFENQV 489
EM + V
Sbjct: 444 EMSDEGV 450
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 83/157 (52%), Gaps = 1/157 (0%)
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A F+ ++ +GV + F L+ R+G + SA ++++M R+G P T L+
Sbjct: 228 AYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMS 287
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
+C K + + L+ + K G+ P +Y ++GLC+ G++++A+++ EM +G
Sbjct: 288 GMC-KASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVN 346
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
P+ +++ ID + KEGNV L +EM ++ +
Sbjct: 347 PNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTD 383
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 131/247 (53%), Gaps = 2/247 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ +++ L+ G+ EG F + +++ MA G +C+ ++L++ + M EA +
Sbjct: 370 PDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLV 429
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM+ + V +VV Y+T+I FC +G +A A E F +M G+E ++ + L++G+C
Sbjct: 430 FTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCM 489
Query: 365 AGDVDSAILVYNDMCRKGFE-PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
GD+ A ++M KG P +I LC + RV +A D+ V+ G PT
Sbjct: 490 HGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNL-VIHIGDRPTI 548
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++ LI G C GKME+A V MV G EP + + + GY K G ++ +L +E
Sbjct: 549 VTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFRE 608
Query: 484 MFENQVR 490
M +V+
Sbjct: 609 MLHKKVK 615
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 121/243 (49%), Gaps = 2/243 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N H N L+ + G ++ V+ EM G P+ +YS L++ FC R+ +A + +
Sbjct: 406 NCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKF 465
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF-EHLVNGYCR 364
+M +E + Y+++I GFC G++ +A+EF EM G+ ++ F +++ C
Sbjct: 466 SQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCI 525
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G V A V+N + G P T LI C ++ +A +L A +V G+ P
Sbjct: 526 EGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDA-MVSVGIEPDVV 584
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ L+ G C+ GK+++ L + EM+ K +P+ Y+ +DG ++ G A + EM
Sbjct: 585 TNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEM 644
Query: 485 FEN 487
++
Sbjct: 645 IDS 647
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 116/231 (50%), Gaps = 1/231 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RP + TFN+L+ G+ G EK V M +G EPD + + L++ +C+ ++ +
Sbjct: 545 RPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLI 604
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+ EM K V+ V YN ++ G G + A++ F EM SG T++ L+ G C
Sbjct: 605 LFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLC 664
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R D AI +++ + + + + + +I L RR EA D+ A + GL P
Sbjct: 665 RNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAA-ISTSGLVPNV 723
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+Y +I+ L +EG +EEA + + M G PS + + I +++G++
Sbjct: 724 STYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDI 774
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 7/244 (2%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPN+ F++++ EG +DV+ + +G P +++ L+ +C +M +A
Sbjct: 510 RPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFG 569
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ + M +E DVV NT++ G+C+ G++ FREM V+ ++VT+ +++G
Sbjct: 570 VLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLL 629
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVKFGLF 420
RAG +A ++++M G + T ++L+ LC EA+ + L A KF +
Sbjct: 630 RAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDIT 689
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+I L + + EEA + A + G P++ Y I +KEG+VE A +
Sbjct: 690 ILNT----MINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTM 745
Query: 481 RKEM 484
M
Sbjct: 746 FSSM 749
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 131/325 (40%), Gaps = 43/325 (13%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
A F S K L + ++ +++IIH L + A+DV + + + P + F L
Sbjct: 496 AKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDR-PTIVTFNSL 554
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
+ Y CL + K+E ++ ++S G+ V T N L+
Sbjct: 555 IDGY----------------CL----VGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYC 594
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
+ + G ++RE+ +V+P T+N ++ G R G +
Sbjct: 595 KSGKIDDGLILFREMLH----------------KKVKPTTVTYNIVLDGLLRAGRTSAAK 638
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
++ EM G D +Y +L+ C EA L+ ++ + + D+ NT+I
Sbjct: 639 KMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINAL 698
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
++ A + F + SG+ + T+ ++ + G V+ A +++ M + G P
Sbjct: 699 YKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSS 758
Query: 388 STIEVLIGELCDKRRVFEALDILKA 412
+ +I R + + DI+KA
Sbjct: 759 RLLNDII------RMLLQKGDIVKA 777
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 41/246 (16%)
Query: 242 RVRP-NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
RV P V T+ LM R + + R G + + + C +R E
Sbjct: 118 RVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDE 177
Query: 301 A-EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS--VTFEH 357
A + L M + + D ++YNT+I C A + + M G S V+F
Sbjct: 178 AVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNT 237
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
+++G+ + G+V A ++N+M +KG P+ T
Sbjct: 238 VIHGFFKQGEVSKACNLFNEMVQKGVVPDVGT---------------------------- 269
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN-VEM 476
Y ++ LC+ M++A V +MV KG EP Y+A I GY G+ E
Sbjct: 270 --------YNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKES 321
Query: 477 ATMLRK 482
A M RK
Sbjct: 322 AKMFRK 327
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 2/143 (1%)
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ L++ CRA D + R G + + LC +R EA+D+L R
Sbjct: 126 TYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHR 185
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG--FEPSLEIYSAFIDGYMKE 471
+ + P SY +IK LC + + +EAL + M +G P + ++ I G+ K+
Sbjct: 186 MSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 245
Query: 472 GNVEMATMLRKEMFENQVRQEDG 494
G V A L EM + V + G
Sbjct: 246 GEVSKACNLFNEMVQKGVVPDVG 268
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 148/314 (47%), Gaps = 8/314 (2%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
+I + C ++R G + K + I E+ G + Y + G +
Sbjct: 138 DIPDVIACTSLIRGFCRSGKTRKATR----IMEILENSGAVPDVITYNVLIG-GYCKSGE 192
Query: 233 IGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
I K ++ + R V P+V T+N ++ G ++ +V + C PD +Y++L+
Sbjct: 193 IDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIE 252
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C + + +A KL +EMR K + DVV YN +I G C+ G + A +F M L G +
Sbjct: 253 ATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQP 312
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ +T ++ C G A + DM RKG P T +LI LC KR + A+D+L
Sbjct: 313 NVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVL 372
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ ++ K G P SY L+ G C+E KM+ A++ MV +G P + Y+ + K
Sbjct: 373 E-KMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCK 431
Query: 471 EGNVEMATMLRKEM 484
+G + A + ++
Sbjct: 432 DGKADAAVEILNQL 445
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 1/223 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN L+ R+ + DV +M + GC P+ SY+ L+ FC+E++M A +
Sbjct: 347 PSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEY 406
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M + D+V YNT++ C+ G+ A E ++ G +T+ +++G +
Sbjct: 407 LEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTK 466
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A + +M RKG +P+ T L+ L + +V EA+ I + + P+
Sbjct: 467 VGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFH-DMEGLSIKPSAV 525
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+Y ++ GLC+ + A+ A MV KG +P+ Y+ I+G
Sbjct: 526 TYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 1/210 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N L+ GF +E ++ + M GC PD +Y+ L+ C++ + A ++
Sbjct: 382 PNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEI 441
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ K ++ YNT+I G ++G+ A E EM G++ +T+ L+ G
Sbjct: 442 LNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGC 501
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G VD AI +++DM +P T ++ LC ++ A+D L A +V+ G PT+
Sbjct: 502 EGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFL-AYMVEKGCKPTKA 560
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+Y LI+G+ +EG EEAL++ E+ +GF
Sbjct: 561 TYTILIEGIADEGLAEEALELLNELCSRGF 590
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ E K E M + DV+A ++I GFC G+ +A + SG +T+
Sbjct: 123 LEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNV 182
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L+ GYC++G++D A+ V R P+ T ++ LCD ++ EA+++L R ++
Sbjct: 183 LIGGYCKSGEIDKALQVLE---RMSVAPDVVTYNTILRSLCDSGKLKEAMEVLD-RQMQR 238
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+P +Y LI+ C + + +A+K+ EM KG +P + Y+ I+G KEG ++ A
Sbjct: 239 ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEA 298
Query: 478 TMLRKEM 484
M
Sbjct: 299 IKFLNNM 305
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
R G E+ M G PD + + L+ FC + R+A ++ E + + D
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
V+ YN +IGG+C+ GE+ +A + M V VT+ ++ C +G + A+ V +
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLD 233
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
++ P+ T +LI C+ V +A+ +L + K G P +Y LI G+C+E
Sbjct: 234 RQMQRECYPDVITYTILIEATCNDSGVGQAMKLLD-EMRKKGCKPDVVTYNVLINGICKE 292
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG---NVE--MATMLRK 482
G+++EA+K M G +P++ ++ + G + E +A MLRK
Sbjct: 293 GRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRK 343
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 133/295 (45%), Gaps = 39/295 (13%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C S+ ++ +I+ L R RL+G A DV+ E PK C
Sbjct: 345 CSPSVVTFNILINFLCRKRLLGRAIDVL-------EKMPK-----------HGCMPNSLS 386
Query: 161 FD-LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
++ LL C E +K++ ++ + +++SRG + T N L+ + + + EI
Sbjct: 387 YNPLLHGFCQE----KKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEIL 442
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
+ L S + P + T+N ++ G + G E ++ EM R G +
Sbjct: 443 NQ---LSSKGCS-------------PVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLK 486
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +YS L+ E ++ EA K++ +M +++ V YN I+ G C+ + +RA +F
Sbjct: 487 PDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDF 546
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
M G + + T+ L+ G G + A+ + N++C +GF + S +V +
Sbjct: 547 LAYMVEKGCKPTKATYTILIEGIADEGLAEEALELLNELCSRGFVKKSSAEQVAV 601
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 1/244 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+N L+ G R GA E+ +M G PD ++Y L+ C+ RR EA+ L
Sbjct: 256 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 315
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM ++ +VV Y +I GF G A + +EM +GV+ + +T+++LV G C+
Sbjct: 316 DEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKM 375
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G +D A L+ M R P+ T ++I +A +L + + G+ P +
Sbjct: 376 GQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLL-SEMENAGISPNVYT 434
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I GLC+ G+ E+A + EM KG +P+ +Y+ I GY +EGNV +A + +M
Sbjct: 435 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 494
Query: 486 ENQV 489
+ V
Sbjct: 495 KVNV 498
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 151/339 (44%), Gaps = 20/339 (5%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV--ISGYEIYREVFGLDSDA-- 229
+ + +T ++ + RG + T N LI + R V G++ E +GL D
Sbjct: 235 VREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFT 294
Query: 230 ----TAGIGK-----------DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
G+ K D ++PNV + L+ GF REG ++ + EM
Sbjct: 295 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 354
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
G +P+ +Y L+ C+ +M A L ++M + D + YN II G
Sbjct: 355 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 414
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
A EM +G+ + T+ +++G C++G+ + A + +M KG +P LI
Sbjct: 415 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 474
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
C + V A +I ++ K + P Y LI GL + G++EE+ K A+M +G
Sbjct: 475 SGYCREGNVSLACEIFD-KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGL 533
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
P+ YS I GY+K G++E A L + M + ++ D
Sbjct: 534 LPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 572
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 124/251 (49%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+PN T++ L+ G + G ++ + +M R PD +Y++++ ++A
Sbjct: 358 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAF 417
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM + + +V Y+ +I G C+ GE +A + EM G++ ++ + L++GY
Sbjct: 418 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 477
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G+V A +++ M + P+ LI L RV E+ A++ + GL P
Sbjct: 478 CREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF-AQMQERGLLPN 536
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E +Y LI G + G +E A ++ M+ G +P+ IY ++ Y K ++E + K
Sbjct: 537 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 596
Query: 483 EMFENQVRQED 493
M + V ++
Sbjct: 597 SMLDQGVMLDN 607
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 128/270 (47%), Gaps = 36/270 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV+T++ ++ G + G EK D+ EM G +P+ + Y+ L++ +C E + A
Sbjct: 428 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 487
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++++M NV D+ YN++I G ++G + + ++F +M G+ + T+ L++GY
Sbjct: 488 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 547
Query: 363 CRAGDVDSAILVYNDMCRKGFEP------------------------------EGSTIE- 391
+ GD++SA + M G +P +G ++
Sbjct: 548 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 607
Query: 392 ----VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+LI L + A +L + K G P Y LI GLC+ E+A +
Sbjct: 608 RIYGILIHNLSSSGNMEAAFRVLSG-IEKNGSVPDVHVYSSLISGLCKTADREKAFGILD 666
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
EM KG +P++ Y+A IDG K G++ A
Sbjct: 667 EMSKKGVDPNIVCYNALIDGLCKSGDISYA 696
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 109/225 (48%), Gaps = 2/225 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ G E V + + G PD + YS L++ C+ +A + +EM
Sbjct: 610 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 669
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K V+ ++V YN +I G C+ G+++ A F + G+ + VT+ L++G C+ GD+
Sbjct: 670 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 729
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+A +YN+M G P+ VL + +A+ +++ ++ + S+ L
Sbjct: 730 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG--HASISSFNNL 787
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ G C+ GKM+E LK+ ++G+G P+ I G + G +
Sbjct: 788 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 832
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 11/246 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T++ L+ G+ + G E E + M G +P+ Y L+ + + + +
Sbjct: 535 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 594
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT-----FEHLV 359
++ M D+ V D Y +I G M E FR LSG+E + + L+
Sbjct: 595 FKSMLDQGVMLDNRIYGILIHNLSSSGNM---EAAFRV--LSGIEKNGSVPDVHVYSSLI 649
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+G C+ D + A + ++M +KG +P LI LC + A ++ + + K GL
Sbjct: 650 SGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK-GL 708
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI G C+ G + A + EM+ G P +YS G G++E A
Sbjct: 709 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 768
Query: 480 LRKEMF 485
L +EMF
Sbjct: 769 LIEEMF 774
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+VH +++L+ G + EK + EM++ G +P+ Y+ L+ C+ + A +
Sbjct: 640 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 699
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + K + + V Y ++I G C++G+++ A + EM +G+ + + L G
Sbjct: 700 FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSS 759
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AGD++ A+ + +M +G S+ L+ C + ++ E L +L ++ GL P
Sbjct: 760 AGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHV-IMGRGLVPNAL 817
Query: 425 SYMFLIKGLCEEGKMEEALKVQAE-------------------MVGKGFEPSLEIYSAFI 465
+ +I GL E GK+ E + E M+ +G P L++ I
Sbjct: 818 TIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMI 876
Query: 466 DGYMKEGNVEMATMLR 481
+ KEGN++ A MLR
Sbjct: 877 RDHCKEGNLDKALMLR 892
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 122/255 (47%), Gaps = 7/255 (2%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V P+++ +N+L+ G + G E+ + +M G P+ ++YS L+ + + +
Sbjct: 496 VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLES 555
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
AE+L + M D ++ + V Y ++ + + ++ + F+ M GV + + L++
Sbjct: 556 AEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIH 615
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKF 417
+G++++A V + + + G P+ LI LC D+ + F LD + K
Sbjct: 616 NLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILD----EMSKK 671
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G+ P Y LI GLC+ G + A V ++ KG P+ Y++ IDG K G++ A
Sbjct: 672 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 731
Query: 478 TMLRKEMFENQVRQE 492
L EM + +
Sbjct: 732 FYLYNEMLATGITPD 746
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 2/233 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN + L+ +++ EKV + M G D Y +L+ M A
Sbjct: 568 LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAF 627
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ + DV Y+++I G C+ + +A EM GV+ + V + L++G
Sbjct: 628 RVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 687
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++GD+ A V+N + KG P T LI C + A L ++ G+ P
Sbjct: 688 CKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF-YLYNEMLATGITPD 746
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
Y L G G +E+A+ + EM +G S+ ++ +DG+ K G ++
Sbjct: 747 AFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQ 798
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 18/229 (7%)
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA--YNTI 323
+++VW R G PD +ER ++ + + VE + +
Sbjct: 184 LQEVWEGAGRRGGRPD------------DERSGHGSQ---HSVLQRAVEGSAARGRHGSA 228
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
+ +C++ E A++ EM G ++VT+ L+ G CR+G V+ A DM G
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
P+G T LI LC RR EA +L L P Y LI G EG +EA
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCA-ELKPNVVVYANLIDGFMREGNADEAF 347
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
K+ EMV G +P+ Y + G K G ++ A++L K+M + R +
Sbjct: 348 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 396
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 54/269 (20%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN+ +NAL+ G + G +V+ + G P+C +Y+ L+ C+ + A
Sbjct: 673 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 732
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ EM + D Y+ + G G++ +A EM L G S S +F +LV+G+
Sbjct: 733 YLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGF 791
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL----------KA 412
C+ G + + + + + +G P TIE +I L + ++ E I A
Sbjct: 792 CKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAA 851
Query: 413 R--------VVKFGLFPTE----------------------------------KSYMFLI 430
R ++ G P + SY+ ++
Sbjct: 852 RHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIV 911
Query: 431 KGLCEEGKMEEALKVQAEMVGKG-FEPSL 458
LC +GK+ EAL + EM +G +P+L
Sbjct: 912 DNLCRKGKLSEALNLLKEMDKRGNLQPTL 940
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 173/362 (47%), Gaps = 20/362 (5%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVD-IVRMLMSRGLSVKV 196
+P L +L+ + G F F +L K I K+ + I+ + +GL +K
Sbjct: 164 EPDLVTLSILINCFCHLGQMAFSFSVLGK-------ILKLGYQPNTIILTTLMKGLCLKG 216
Query: 197 STCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD--VKRVVRV------RPNVH 248
+L + K V G+++ + +G + IG+ +++R+ RP+V
Sbjct: 217 EVKKSLHF---HDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVV 273
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+N ++ G ++ + D + EM G PD +YS L+ FC ++ A L EM
Sbjct: 274 MYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEM 333
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
KN+ DV Y +I C+ G++ A+ M GV+ + VT+ L++GYC G+V
Sbjct: 334 TLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEV 393
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+A +++ M + P + ++I LC + V EA+++L+ + K + P +Y
Sbjct: 394 HNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHK-NVVPNTVTYNS 452
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI GLC+ G++ AL + E+ +G + Y++ +DG K N++ A L +M E
Sbjct: 453 LIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERG 512
Query: 489 VR 490
++
Sbjct: 513 IQ 514
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 149/305 (48%), Gaps = 17/305 (5%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
+ ++RM+ R V N +I + + K V Y+ Y E+ + GI
Sbjct: 257 IKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEM------NSRGI------- 303
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
P+V T++ L+ GF G + EM PD Y+Y++L+ C+E +++E
Sbjct: 304 ---FPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKE 360
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A+ L M + V+ +VV Y+T++ G+C +GE+ A++ F M + V S ++ ++N
Sbjct: 361 AKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMIN 420
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ VD A+ + +M K P T LI LC R+ ALD++K + G
Sbjct: 421 GLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMK-ELHHRGQP 479
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y L+ GLC+ +++A+ + +M +G +P+ Y+A IDG K ++ A L
Sbjct: 480 ADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKL 539
Query: 481 RKEMF 485
+ +
Sbjct: 540 FQHIL 544
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 134/275 (48%), Gaps = 7/275 (2%)
Query: 217 EIYREVFGLDSDATAGIGKDVKRVVRV------RPNVHTFNALMVGFYREGAFEKVEDVW 270
++Y +D+ G K+ K ++ V +PNV T++ LM G+ G + ++
Sbjct: 341 DVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIF 400
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
M + P SY++++ C+ + + EA L EM KNV + V YN++I G C+
Sbjct: 401 HAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKS 460
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G + A + +E+ G + +T+ L++G C+ ++D AI ++ M +G +P T
Sbjct: 461 GRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTY 520
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
LI LC R+ A + + +VK G +Y +I GLC+EG ++EAL ++++M
Sbjct: 521 TALIDGLCKGARLKNAQKLFQHILVK-GCCIDVYTYNVMIGGLCKEGMLDEALAMKSKME 579
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
G P + I ++ + A L EM
Sbjct: 580 DNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMI 614
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 1/251 (0%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
++R P++ F ++ + F + +M G EPD + S+L+ FC +M
Sbjct: 125 LMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMA 184
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+ + ++ + + + T++ G C GE+ ++ F ++ G + + V++ L+
Sbjct: 185 FSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLL 244
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
NG C+ G+ AI + + + P+ +I LC + V EA D + G+
Sbjct: 245 NGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYD-FYTEMNSRGI 303
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
FP +Y LI G C G++ A + EM K P + Y+ ID KEG ++ A
Sbjct: 304 FPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKN 363
Query: 480 LRKEMFENQVR 490
L M + V+
Sbjct: 364 LLGVMTKEGVK 374
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 102/221 (46%), Gaps = 16/221 (7%)
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
V + N +I + +GK V + RE+ K VV PN T+N+L+
Sbjct: 412 VCSYNIMINGLCKGKSVDEAMNLLREMLH-------------KNVV---PNTVTYNSLID 455
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G + G D+ E+ G D +Y+ L+ C+ + + +A L+ +M+++ ++
Sbjct: 456 GLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQP 515
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
+ Y +I G C+ + A++ F+ + + G T+ ++ G C+ G +D A+ +
Sbjct: 516 NKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMK 575
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
+ M G P+ T E++I L +K +A +L + K
Sbjct: 576 SKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 616
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 118/243 (48%), Gaps = 23/243 (9%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
++F +V+T E + ++++I + K++++ ++++R ++ + + T N+
Sbjct: 398 QIFHAMVQT--EVNPSVCSYNIMINGLCKGKSVDE---AMNLLREMLHKNVVPNTVTYNS 452
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP-NVHTFNALMVGFYRE 260
LI + + + S ++ +E+ R +P +V T+ +L+ G +
Sbjct: 453 LIDGLCKSGRITSALDLMKELHH-----------------RGQPADVITYTSLLDGLCKN 495
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
+K ++++M G +P+ Y+Y+ L+ C+ R++ A+KL++ + K DV Y
Sbjct: 496 QNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTY 555
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
N +IGG C+ G + A +M +G +VTFE ++ + D A + ++M
Sbjct: 556 NVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIA 615
Query: 381 KGF 383
KG
Sbjct: 616 KGL 618
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F M L S + F ++ + +AI + M KG EP+ T+ +LI C
Sbjct: 120 FNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCH 179
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
++ + +L +++K G P L+KGLC +G+++++L ++V +GF+ +
Sbjct: 180 LGQMAFSFSVL-GKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQV 238
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
Y ++G K G A L + M E++ + D
Sbjct: 239 SYGTLLNGLCKIGETRCAIKLLR-MIEDRSTRPD 271
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/525 (23%), Positives = 227/525 (43%), Gaps = 66/525 (12%)
Query: 5 ILKH--IIFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLL 62
IL+H I S + P LS F+ +S+T S L +L S+W H +
Sbjct: 9 ILRHRISILSGAGYYPTAARLSSFAQTSTTTES----QLPPITSEVLLESIKSSQW-HFI 63
Query: 63 SLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIG 122
L P+ S L L P LA F+F H L + I ++S+
Sbjct: 64 EHVTDKLIPSLVSTTLLSLVKTPDLA---FNFVNHIDLRCLDFQTQCLAIAVVSKLSSPK 120
Query: 123 PARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVD 182
+++ + + +N + E+++ R + +FD +++ +++ +++ C
Sbjct: 121 SVTQLLKEVVSTRKNSVRDLFDELVLAHDRLQTKSTILFDFMVRFYCQLRMVDEAIECFY 180
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+++ +G K TCN ++ +SR + + + Y +++ ++
Sbjct: 181 LMK---EKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRME---------------- 221
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ NV+TFN ++ +EG +K + M G +P +Y+ L+ + R+ A
Sbjct: 222 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGAR 281
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EM+ K + D+ YN I+ C G RA E REM G+ SV++ L+ G
Sbjct: 282 MIISEMKSKGFQPDLQTYNPILSWMCNEG---RASEVLREMKGIGLVPDSVSYNILIRGC 338
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTI----------------EVLIGELCDKRRVFEA 406
GD+++A ++M ++G P T E+LI E+ +K V ++
Sbjct: 339 SNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 398
Query: 407 L-------------DILKA-----RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
+ D KA ++ G+ PT+ +Y LI LC K EA ++ +
Sbjct: 399 VTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEK 458
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+VGKG +P L + + +DG+ GN++ A L KEM + +D
Sbjct: 459 VVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDD 503
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 151/345 (43%), Gaps = 57/345 (16%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALI-WEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
+IE I+ + S+G + T N ++ W + G+ E+ RE+ GIG
Sbjct: 276 RIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRAS----EVLREM--------KGIG 323
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+ P+ ++N L+ G G E EM + G P Y+Y+ L+
Sbjct: 324 --------LVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 375
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E ++ AE L E+R+K + D V YN +I G+C+ G+ +A EM G++ + T
Sbjct: 376 ENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFT 435
Query: 355 FEHLV-----------------------------------NGYCRAGDVDSAILVYNDMC 379
+ L+ +G+C G++D A + +M
Sbjct: 436 YTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMD 495
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
R +P+ T L+ LC + + EA +++ + + G+ P SY LI G ++G
Sbjct: 496 RMNIDPDDVTYNCLMRGLCGEGKFEEARELM-GEMKRRGIKPDHISYNTLISGYSKKGDT 554
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ A V+ EM+ GF P+L Y+A + G K + E+A L +EM
Sbjct: 555 KHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREM 599
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 1/225 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N ++ G+ + G +K + EM G +P ++Y+ L+ V C + REA++L+E++
Sbjct: 400 TYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKV 459
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
K ++ D+V NT++ G C G M RA +EM ++ VT+ L+ G C G
Sbjct: 460 VGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKF 519
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A + +M R+G +P+ + LI K A I++ ++ G PT +Y
Sbjct: 520 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF-IVRDEMLSLGFNPTLLTYNA 578
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
L+KGL + E A ++ EM +G P+ + + I+ K N
Sbjct: 579 LLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKSDN 623
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 6/243 (2%)
Query: 195 KVSTCNALIWEVSRGKGVI---SGYEIYREVFGLDSDATAGIG-KDVKRVVRVRPNVHTF 250
K+ LI E+ R KG++ Y I + DA D ++P T+
Sbjct: 378 KIEAAEILIREI-REKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTY 436
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
+L+ R + ++++ ++ G +PD + LM C M A L +EM
Sbjct: 437 TSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDR 496
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
N++ D V YN ++ G C G+ A E EM G++ +++ L++GY + GD
Sbjct: 497 MNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKH 556
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A +V ++M GF P T L+ L K + E + L + G+ P + S+ +I
Sbjct: 557 AFIVRDEMLSLGFNPTLLTYNALLKGL-SKNQDGELAEELLREMKSEGIVPNDSSFCSVI 615
Query: 431 KGL 433
+ +
Sbjct: 616 EAM 618
>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
Length = 626
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 225/493 (45%), Gaps = 46/493 (9%)
Query: 27 STSSSTP-----PSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSG--------LTPTQ 73
S S S P P +Q+ N ++ + S R N L+L ++ L +
Sbjct: 44 SISLSNPLYSFLPENQNPNNFVNLI-----YSSLKRDNTQLTLLQNDDIKGLIHHLGANE 98
Query: 74 FSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALR 133
S++ L +++ AL FF++ ++ K S +Y I+H+L+ ++ A + L
Sbjct: 99 ISRVLLRCQSDSVSALTFFNWVKNDLGLKPSTLNYCLILHVLAWSKEFEQAMKFL-TELI 157
Query: 134 SPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNI-EKIETCVDIVRMLMSRGL 192
D +F+ L ++C P +FDLL+K ++ I E T + I+ + G
Sbjct: 158 LLVKDTDEDVFQCLFLCCQDCNWDPIIFDLLLKAYVKAGMIKEGFRTFMQILEV----GY 213
Query: 193 SVKVSTCNALI------------WEV--SRGK-GVISG---YEIYREVFGLDSDATAGIG 234
V CN L+ W V G+ GVI + I +F D D +
Sbjct: 214 VPSVIACNYLLNGLLKSNHIHLCWHVYGEMGRVGVIPNSYTFNILTHLFCKDGDIDK-MN 272
Query: 235 KDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
++++ P++ T+N L+ G+ G ++ M R PD SY+ LM
Sbjct: 273 DFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGL 332
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C+E R+REA +L M + + DVV+YNT+I G+C+ G+M ++ EM +G+ S
Sbjct: 333 CKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGNGIFPDS 392
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
T L+ GY + G + SA+ + ++ + G + L+ LC++ R F A +L+
Sbjct: 393 FTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLE- 451
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
R+ + G P + Y LI+ LC+ + +AL ++AE+V P+L Y A I + G
Sbjct: 452 RMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMG 511
Query: 473 NVEMATMLRKEMF 485
A L +EM
Sbjct: 512 RSIEAEKLMEEML 524
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 1/212 (0%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C D + +L+ + + ++E + + ++ + V+A N ++ G + +
Sbjct: 178 CNWDPIIFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCW 237
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+ EMG GV +S TF L + +C+ GD+D M +GFEP+ T LI
Sbjct: 238 HVYGEMGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGY 297
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C + R+ +A + + + + + P SY L+ GLC+EG++ EA ++ MV +G P
Sbjct: 298 CGRGRLSDAFYLYRI-MYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPD 356
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ Y+ I GY KEG + + L EM N +
Sbjct: 357 VVSYNTLICGYCKEGKMLESKSLLYEMIGNGI 388
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 129/291 (44%), Gaps = 21/291 (7%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
++ ++ RGL+ V + N LI + ++ + E+ G GI
Sbjct: 344 LLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIG------NGI--------- 388
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE--PDCYSYSVLMAVFCEERRMRE 300
P+ T L+ G+ +EG ++ VE+ + G PD Y Y L+A CEE R
Sbjct: 389 -FPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDY--LVASLCEEDRPFA 445
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A+ L E M + V YN +I C+ +A A E+ + + + +T++ L+
Sbjct: 446 AKTLLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIR 505
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
CR G A + +M G +P+ +I C ++ +A +L +F +F
Sbjct: 506 CLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIF 565
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+E SY L++ +CE+G + + +++Q M+ GF P+ IDG K
Sbjct: 566 DSE-SYSTLVRIVCEDGDVAKFMELQERMLKVGFAPNSLTCKYMIDGLRKN 615
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 187/410 (45%), Gaps = 30/410 (7%)
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF 144
P AL FF + + +H+ S+A ++H+LSR R ++ L + +++
Sbjct: 70 PATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVS 129
Query: 145 EVLVKTYRECGSA-----PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC 199
++ R GSA P ++ ++ + + E + L+ GL T
Sbjct: 130 ADAIQAIRRTGSARLALSPKCYNFALR---SLARFDMTEYMGRVYSQLVQDGLLPDTVTY 186
Query: 200 NALIWEVSRGKGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
N +I + + + + +R + GL+ P T NAL++G+
Sbjct: 187 NTMIKSYCKEGDLTTAHRCFRLLLEGGLE------------------PETFTCNALVLGY 228
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
R G K +++ M +GC+ + YSY++L+ CE + +REA L+ M+ +V
Sbjct: 229 CRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNV 288
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
A+ +I G C+ G + A F M +GV S +T+ ++ GY + G ++ A+ +
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 348
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
M + G P+ T LI LCD++ E + L VK G PT ++ LI G C
Sbjct: 349 MEKNGCHPDDWTYNTLIYGLCDQKT--EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAE 406
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
K ++AL+++ +M+ + L+++ I+ +K+ ++ A L E+ N
Sbjct: 407 KFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISAN 456
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 121/234 (51%), Gaps = 4/234 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN T+N+LM G ++ K + +M + G P+ +Y+ L+ C+E A +
Sbjct: 494 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFR 553
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+E M ++ D AY + C+ G RAEE + + GV + V + L++G+
Sbjct: 554 LFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDGFS 610
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+AG+ D A + M +G P+ T VL+ LC ++R+ EAL IL ++ G+ T
Sbjct: 611 KAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR-GIKCTI 669
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI + EGK + A ++ EM G +PS Y+ FI+ Y KEG +E A
Sbjct: 670 FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDA 723
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 116/266 (43%), Gaps = 50/266 (18%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ GF + G + + M GC PD Y+YSVL+ C+++R+ EA + ++M
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ ++ + AY +I G+ A+ + EM SG + S+ T+ +N YC+ G ++
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLI---GELCDKRRVFEA-------------------- 406
A + M R+G P+ T +LI G + R F
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781
Query: 407 ------------------------LDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
LDI L R+VK GL PT +Y LI G C+ G++
Sbjct: 782 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 841
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFI 465
EEA + M GKG P+ +IY+ I
Sbjct: 842 EEACLLLDHMCGKGLSPNEDIYTLLI 867
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 121/270 (44%), Gaps = 37/270 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+NA++VG+ + G + M + GC PD ++Y+ L+ C+++ EAE
Sbjct: 319 VVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAE 377
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFC---------------------------------- 328
+L + VV + +I G+C
Sbjct: 378 ELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSL 437
Query: 329 -EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
+ + A+E E+ +G+ + +T+ +++GYC++G VD A+ V M R G +P
Sbjct: 438 IKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNA 497
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T L+ L +++ +A+ +L ++ K G+ P +Y L++G C+E + A ++
Sbjct: 498 WTYNSLMYGLVKDKKLHKAMALL-TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFE 556
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
M G +P Y+ D K G E A
Sbjct: 557 MMEQNGLKPDEHAYAVLTDALCKAGRAEEA 586
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 17/260 (6%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ + + L+ REG + + ++ EM G +P +Y+V + +C+E R+ +AE
Sbjct: 665 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 724
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF----EHL 358
L +M + V DVV YN +I G +G + RA + M + E + T+ +HL
Sbjct: 725 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 784
Query: 359 VNG---YCRAGD---------VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
+ G Y R+ D +D + M + G P +T LI C R+ EA
Sbjct: 785 LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 844
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+L K GL P E Y LIK C+ E+AL + M GF+P LE Y +
Sbjct: 845 CLLLDHMCGK-GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVV 903
Query: 467 GYMKEGNVEMATMLRKEMFE 486
G EG+ E L ++ E
Sbjct: 904 GLCNEGDFEKVKSLFCDLLE 923
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 5/221 (2%)
Query: 274 ARLGCEPDCYSYSVL-MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
ARL P CY++++ +A F M +++ ++ + D V YNT+I +C+ G+
Sbjct: 142 ARLALSPKCYNFALRSLARFDMTEYM---GRVYSQLVQDGLLPDTVTYNTMIKSYCKEGD 198
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A FR + G+E + T LV GYCR G++ A ++ M G + + +
Sbjct: 199 LTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTI 258
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI LC+ + V EAL +L + + G P +++ FLI GLC+ G++ +A + M
Sbjct: 259 LIQGLCEAKCVREAL-VLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQN 317
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
G PS+ Y+A I GY K G + A +++ M +N +D
Sbjct: 318 GVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDD 358
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 120/306 (39%), Gaps = 66/306 (21%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P V TF L+ G+ F+ + +M C+ D + L+ ++ R++EA++L
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS------------ 352
E+ + +V+ Y +II G+C+ G++ A E + M G + ++
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509
Query: 353 -----------------------VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
+T+ L+ G C D D+A ++ M + G +P+
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569
Query: 390 IEVLIGELCDKRRVFEALDI-------------------------------LKARVVKFG 418
VL LC R EA L R++ G
Sbjct: 570 YAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 629
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
P +Y L+ LC++ ++ EAL + +M +G + ++ Y+ ID ++EG + A
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 689
Query: 479 MLRKEM 484
+ EM
Sbjct: 690 RMYNEM 695
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 237 VKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
++R+V+ + P V T+++L+ GF + G E+ + M G P+ Y++L+ C+
Sbjct: 813 LERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCD 872
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ +A M + + + +Y ++ G C G+ + + F ++ G V
Sbjct: 873 TKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVA 932
Query: 355 FEHLVNGYCRAGDVD 369
++ L +G +AG VD
Sbjct: 933 WKILNDGLLKAGYVD 947
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 3/144 (2%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M + G P +YS L+A FC+ R+ EA L + M K + + Y +I C+
Sbjct: 816 MVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKF 875
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+A F M G + ++ LV G C GD + ++ D+ G+ + ++
Sbjct: 876 FEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKI 935
Query: 393 LIGELCDKRRV---FEALDILKAR 413
L L V F+ L I++ R
Sbjct: 936 LNDGLLKAGYVDICFQMLSIMEKR 959
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 133/243 (54%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ PNV F+ ++ +EG + DV M + G EP+ +Y+ LM C M EA
Sbjct: 264 KIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEA 323
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+++ M K DVV+Y+T+I G+C+I + +A F EM + ++VT+ L++G
Sbjct: 324 VKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHG 383
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C G + AI ++++M +G P+ + +L+ LC RR+ EA+ +LKA + + P
Sbjct: 384 LCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA-IEGSNMDP 442
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ Y +I G+C G++E A + + + KG P++ Y+ I+G ++G + A+ L
Sbjct: 443 DIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLF 502
Query: 482 KEM 484
EM
Sbjct: 503 GEM 505
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 121/251 (48%), Gaps = 6/251 (2%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN+ TFN L+ G EG +V ++ +M G +P+ +Y L+ C+ A +
Sbjct: 126 QPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIR 185
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L M N + DVV Y +II C+ ++ +A F EM G+ S T+ L++ C
Sbjct: 186 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALC 245
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ + N+M P ++ LC + +V EA D++ ++K G+ P
Sbjct: 246 NLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDM-MIKRGVEPNV 304
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT----- 478
+Y L+ G C +M+EA+KV MV KGF P + YS I+GY K +E A
Sbjct: 305 VTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEE 364
Query: 479 MLRKEMFENQV 489
M RKE+ N V
Sbjct: 365 MCRKELIPNTV 375
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 124/245 (50%), Gaps = 5/245 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N+L+ ++ V + EM P+ +S ++ C+E ++ EA
Sbjct: 230 ISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAH 289
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M + VE +VV YN ++ G C EM A + F M G V++ L+NGY
Sbjct: 290 DVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGY 349
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ ++ A+ ++ +MCRK P T L+ LC R+ +A+ + V + G P
Sbjct: 350 CKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTR-GQIPD 408
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY L+ LC+ +++EA+ + + G +P ++IY+ IDG + G +E A +
Sbjct: 409 FVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAA----R 464
Query: 483 EMFEN 487
++F N
Sbjct: 465 DLFSN 469
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 120/241 (49%), Gaps = 1/241 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+V + +++ ++ + +++ EM G P ++Y+ L+ C +
Sbjct: 196 QPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTA 255
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L EM + + +VV ++T++ C+ G++ A + M GVE + VT+ L++G+C
Sbjct: 256 LLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHC 315
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
++D A+ V++ M KGF P+ + LI C +R+ +A+ + + K L P
Sbjct: 316 LRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRK-ELIPNT 374
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ GLC G++++A+ + EMV +G P Y +D K ++ A L K
Sbjct: 375 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 434
Query: 484 M 484
+
Sbjct: 435 I 435
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 111/230 (48%), Gaps = 1/230 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ F L++ + + V + +M G P+ Y+ ++L+ FC +R+ A +
Sbjct: 57 PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ + ++ +NT+I G C G++ F +M G + + VT+ L+NG C+
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +AI + M + +P+ +I LC R+V +A ++ + ++ G+ P+
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF-SEMIHQGISPSIF 235
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+Y LI LC + + + EMV P++ I+S +D KEG V
Sbjct: 236 TYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKV 285
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 128/294 (43%), Gaps = 32/294 (10%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK--- 238
D+V M++ RG+ V T NAL+ G + S + +VF D+ G DV
Sbjct: 290 DVVDMMIKRGVEPNVVTYNALM----DGHCLRSEMDEAVKVF--DTMVCKGFAPDVVSYS 343
Query: 239 -------RVVRVR---------------PNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
++ R+ PN T++ LM G G + ++ EM
Sbjct: 344 TLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTR 403
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G PD SY +L+ C+ RR+ EA L + + N++ D+ Y +I G C GE+ A
Sbjct: 404 GQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAA 463
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ F + G+ + T+ ++NG C+ G + A ++ +M RKG+ P G T ++
Sbjct: 464 RDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRG 523
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+ +L+ + + G + L++ L ++G + ++ +E +
Sbjct: 524 FLRNNETLRGIQLLQEMLAR-GFSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 576
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G P T+ +LI C +R+ A +L A+++K G P ++ LI+GLC EGK+ E
Sbjct: 89 GIPPNIYTLNILINSFCHLQRLGFAFSVL-AKILKLGHQPNIATFNTLIRGLCVEGKIGE 147
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
L + +M+G+GF+P++ Y I+G K G+ A L + M
Sbjct: 148 VLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM 190
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 130/242 (53%), Gaps = 5/242 (2%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N+L+ G G +++V + +M R +PD Y++++L+ C+E R+ EA+ + M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + D+V YN ++ G+C + A E F M G+E + + L++GYC+ V
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D A++++ ++C K P ++ LI LC+ R+ +L + P +Y
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLD-EMHGSAQPPDVVTYNI 410
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI LC+EG++ EAL V M+ KG +P++ Y+A +DGY NV +A K++F
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVA----KDIFNRM 466
Query: 489 VR 490
V+
Sbjct: 467 VK 468
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 126/242 (52%), Gaps = 2/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+PN+ T+NA+M G+ +D++ M + G EPD +Y+VL+ +C+ + EA
Sbjct: 436 VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAI 495
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++EMR KN+ D+ +YN++I G C +G + +E EM SG +T+ L++ +
Sbjct: 496 VLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAF 555
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ D AI ++ + +G P+ T ++ LC ++ A D LK ++ G P
Sbjct: 556 CKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALK-HLLMHGCSPN 613
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++Y LI LC++G EA+ + ++M P + I ++ + A LR+
Sbjct: 614 VQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLRE 673
Query: 483 EM 484
EM
Sbjct: 674 EM 675
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P++ T+NALM G+ + +++ M + G EPD +Y+VL+ +C+ + + EA
Sbjct: 297 KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMV 356
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L++E+ +KN+ + +YN++I G C G ++ ++ EM S VT+ L++ C
Sbjct: 357 LFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALC 416
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G + A+ V M +KG +P T ++ C + V A DI R+VK GL P
Sbjct: 417 KEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN-RMVKSGLEPDI 475
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI G C+ ++EA+ + EM K P + Y++ IDG G + L E
Sbjct: 476 LNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDE 535
Query: 484 M 484
M
Sbjct: 536 M 536
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 129/250 (51%), Gaps = 3/250 (1%)
Query: 237 VKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+ ++VR V P+ +TFN L+ +EG + + V M++ G +PD +Y+ LM +C
Sbjct: 253 LTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCS 312
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ EA +L+ M + +E DV+ YN +I G+C+ + A F+E+ + + +
Sbjct: 313 RENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIAS 372
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L++G C +G + + ++M P+ T +LI LC + R+ EAL +L +
Sbjct: 373 YNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVL-VMM 431
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+K G+ P +Y ++ G C + A + MV G EP + Y+ I+GY K V
Sbjct: 432 MKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMV 491
Query: 475 EMATMLRKEM 484
+ A +L KEM
Sbjct: 492 DEAIVLFKEM 501
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 122/241 (50%), Gaps = 1/241 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN+ TFN ++ GF G K D + G D ++Y L+ + +++ A
Sbjct: 122 QPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALH 181
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +EM +V+ ++V Y+ +I G C+ G ++ A ++G G+ +VT+ L++G C
Sbjct: 182 LLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCC 241
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G + M R+ +P+ T +LI LC + R+ EA +L A + K G P
Sbjct: 242 SVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVL-AMMSKRGEKPDI 300
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L++G C + EA ++ MV +G EP + Y+ IDGY K V+ A +L KE
Sbjct: 301 VTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKE 360
Query: 484 M 484
+
Sbjct: 361 L 361
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 151/359 (42%), Gaps = 34/359 (9%)
Query: 132 LRSPENDPKLKLFEVLVKTYRECGSAPFVFDLL---IKCCLEVKNIEKIETCV------- 181
L+S P + F +L+ Y F F LL +K + N+ T +
Sbjct: 81 LQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQ-PNLVTFNTIINGFCING 139
Query: 182 ------DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
D + L+++G T LI +S+ + + + +E+
Sbjct: 140 MIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM------------- 186
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
V+PN+ ++AL+ G ++G + ++ G D +Y+ L+ C
Sbjct: 187 ---EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSV 243
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R +E +L +M +NV+ D +N +I C+ G + A+ M G + VT+
Sbjct: 244 GRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTY 303
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+ GYC +V A ++N M ++G EP+ VLI C + V EA+ + K
Sbjct: 304 NALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN 363
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
K L PT SY LI GLC G++ K+ EM G P + Y+ ID KEG +
Sbjct: 364 K-NLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRI 421
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 140/303 (46%), Gaps = 18/303 (5%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
E + ++ ++ RGL V N LI + K V +++E+
Sbjct: 314 ENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN---------- 363
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
K +V P + ++N+L+ G G V+ + EM PD +Y++L+ C+
Sbjct: 364 ---KNLV---PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E R+ EA + M K V+ ++V YN ++ G+C + A++ F M SG+E +
Sbjct: 418 EGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILN 477
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+NGYC+ VD AI+++ +M K P+ ++ LI LC+ R+ ++L +
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLD-EM 536
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
G P +Y L+ C+ ++A+ + ++V +G P A +D K +
Sbjct: 537 CDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKL 595
Query: 475 EMA 477
+MA
Sbjct: 596 KMA 598
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 125/290 (43%), Gaps = 40/290 (13%)
Query: 238 KRVVRVRPNVHT--FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R+VRV P T F+ L+ R G + ++ ++ G P ++++L+ + +
Sbjct: 44 NRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQ 103
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
A L + + ++V +NTII GFC G + +A +F + + G T+
Sbjct: 104 SHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTY 163
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI------ 409
L+NG + G + +A+ + +M + +P LI LC V +AL +
Sbjct: 164 GTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGE 223
Query: 410 ----------------------------LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
L ++V+ + P + ++ LI LC+EG++ E
Sbjct: 224 RGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILE 283
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
A V A M +G +P + Y+A ++GY NV A +E+F V++
Sbjct: 284 AQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEA----RELFNRMVKR 329
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 102/239 (42%), Gaps = 4/239 (1%)
Query: 258 YREGAFEKVEDV---WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
++ F V+D + M R+ P + L+ A L+ +++ K +
Sbjct: 28 HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
+ + +I + A A + SG + + VTF ++NG+C G + A+
Sbjct: 88 PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
++ +G+ + T LI L ++ AL +L+ + K + P Y LI GLC
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQ-EMEKSSVQPNLVMYSALIDGLC 206
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
++G + +AL + +++ +G Y++ IDG G + T L +M V +D
Sbjct: 207 KDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDD 265
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 129/327 (39%), Gaps = 48/327 (14%)
Query: 30 SSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIAL----GLKNNP 85
S+ PP ++N++ + +L R L+ + + G+ P + A+ L+NN
Sbjct: 399 SAQPPDVVTYNIL--IDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNV 456
Query: 86 HLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFE 145
++A F+ KS + + +Y +I+ + ++ A V+ +R P + +
Sbjct: 457 NVAKDIFN-RMVKSGLEPDILNYNVLINGYCKTEMVDEAI-VLFKEMRHKNLIPDIASYN 514
Query: 146 VLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWE 205
L+ G P V +LL + C G S V T N L+
Sbjct: 515 SLIDGLCNLGRIPHVQELLDEMC--------------------DSGQSPDVITYNILLDA 554
Query: 206 VSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEK 265
+ + ++R++ V + P+ +T +A++ + +
Sbjct: 555 FCKTQPFDKAISLFRQI-----------------VEGIWPDFYTNHAIVDNLCKGEKLKM 597
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
ED + GC P+ +Y++L+ C++ EA L +M D + D + + IIG
Sbjct: 598 AEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIG 657
Query: 326 GFCEIGEMARAEEFFREM---GLSGVE 349
+ E +AE+ EM GL +E
Sbjct: 658 VLLQRNETDKAEKLREEMIARGLVNIE 684
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 153/337 (45%), Gaps = 50/337 (14%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++ RG+ V T N LI V E++ ++ V R ++ PN
Sbjct: 169 MLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQM--------------VAR--QIDPN 212
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T+ +++ EG E ++ M G P+ Y+Y+VLM+ C+ + A L++
Sbjct: 213 VITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQ 272
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
E+ + + + V + T+I GFC+ + A++ FR+M GV + + L++G R+G
Sbjct: 273 ELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSG 332
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA-------------- 412
D A+ +Y +M R G P+ T +++ LCD ++ A L+
Sbjct: 333 DAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYN 392
Query: 413 --------------------RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
R+ + G+ P SY LI G + GKM+ A+ + EMV K
Sbjct: 393 ALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAK 452
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G EP++ Y+A I G+ K G ++ A KEM EN +
Sbjct: 453 GIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGI 489
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 1/253 (0%)
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
V R + P + NA++ G + +++ EM R G P +Y+ L+ +
Sbjct: 133 VFRRLWTLPALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQG 192
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ +A+++W++M + ++ +V+ Y ++I CE G + AE F M +G+ + T+
Sbjct: 193 AVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYN 252
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L++G+C+ DV+SA ++Y ++ G P LI C +R EA D+ + + +
Sbjct: 253 VLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFR-DMPR 311
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
FG+ PT Y L+ G G +EAL + EM G P S + G G +++
Sbjct: 312 FGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQV 371
Query: 477 ATMLRKEMFENQV 489
A + + E+ V
Sbjct: 372 AARFLEGVREDGV 384
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 136/293 (46%), Gaps = 20/293 (6%)
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATA------GIGK-----DV 237
G+ T N L+ +G V S + +Y+E+ GL +A G K +
Sbjct: 243 GMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEA 302
Query: 238 KRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
K + R V P V +N+LM G +R G ++ ++ EM RLG PD ++ S+++
Sbjct: 303 KDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRG 362
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+ +++ A + E +R+ V + AYN +I +C G + A M GVE +
Sbjct: 363 LCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPN 422
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
V++ L++G+ + G + A+ +Y +M KG EP T LI + A K
Sbjct: 423 VVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHK 482
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+++ G+ P + L+ GLC E ++++A++ E G + +S F
Sbjct: 483 -EMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNF 534
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 110/236 (46%), Gaps = 4/236 (1%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
L++ + G ++ V+ + L P C + ++ + RR R A +L++EM
Sbjct: 113 ALGVLVIALSQMGLLDEALYVFRRLWTLPALPAC---NAVLDGLVKARRSRCAWELFDEM 169
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + VV YNT+I G +A+A+E + +M ++ + +T+ ++ C G +
Sbjct: 170 LRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCI 229
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A +++ M G P T VL+ C V A +L ++ GL P +
Sbjct: 230 GDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAF-VLYQELLNSGLIPNAVVFTT 288
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LI G C+ + EA + +M G P++ +Y++ +DG + G+ + A L +EM
Sbjct: 289 LIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEM 344
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV T+ AL+ G + G + EM G P+ + SVL+ C E R+++A
Sbjct: 454 IEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAV 513
Query: 303 KLWEE-----------------MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ E ++ + + Y T+I G G+ A + F M
Sbjct: 514 RFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRK 573
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
SG+ S S T+ L+ G C G V +A+++Y DM + G +P
Sbjct: 574 SGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 133/243 (54%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ PNV F+ ++ +EG + DV M + G EP+ +Y+ LM C M EA
Sbjct: 273 KIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEA 332
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+++ M K DVV+Y+T+I G+C+I + +A F EM + ++VT+ L++G
Sbjct: 333 VKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHG 392
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C G + AI ++++M +G P+ + +L+ LC RR+ EA+ +LKA + + P
Sbjct: 393 LCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA-IEGSNMDP 451
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ Y +I G+C G++E A + + + KG P++ Y+ I+G ++G + A+ L
Sbjct: 452 DIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLF 511
Query: 482 KEM 484
EM
Sbjct: 512 GEM 514
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 121/251 (48%), Gaps = 6/251 (2%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN+ TFN L+ G EG +V ++ +M G +P+ +Y L+ C+ A +
Sbjct: 135 QPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIR 194
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L M N + DVV Y +II C+ ++ +A F EM G+ S T+ L++ C
Sbjct: 195 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALC 254
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ + N+M P ++ LC + +V EA D++ ++K G+ P
Sbjct: 255 NLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDM-MIKRGVEPNV 313
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT----- 478
+Y L+ G C +M+EA+KV MV KGF P + YS I+GY K +E A
Sbjct: 314 VTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEE 373
Query: 479 MLRKEMFENQV 489
M RKE+ N V
Sbjct: 374 MCRKELIPNTV 384
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 124/245 (50%), Gaps = 5/245 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N+L+ ++ V + EM P+ +S ++ C+E ++ EA
Sbjct: 239 ISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAH 298
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M + VE +VV YN ++ G C EM A + F M G V++ L+NGY
Sbjct: 299 DVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGY 358
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ ++ A+ ++ +MCRK P T L+ LC R+ +A+ + V + G P
Sbjct: 359 CKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTR-GQIPD 417
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY L+ LC+ +++EA+ + + G +P ++IY+ IDG + G +E A +
Sbjct: 418 FVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAA----R 473
Query: 483 EMFEN 487
++F N
Sbjct: 474 DLFSN 478
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 120/241 (49%), Gaps = 1/241 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+V + +++ ++ + +++ EM G P ++Y+ L+ C +
Sbjct: 205 QPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTA 264
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L EM + + +VV ++T++ C+ G++ A + M GVE + VT+ L++G+C
Sbjct: 265 LLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHC 324
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
++D A+ V++ M KGF P+ + LI C +R+ +A+ + + K L P
Sbjct: 325 LRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRK-ELIPNT 383
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ GLC G++++A+ + EMV +G P Y +D K ++ A L K
Sbjct: 384 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 443
Query: 484 M 484
+
Sbjct: 444 I 444
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 111/230 (48%), Gaps = 1/230 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ F L++ + + V + +M G P+ Y+ ++L+ FC +R+ A +
Sbjct: 66 PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ + ++ +NT+I G C G++ F +M G + + VT+ L+NG C+
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +AI + M + +P+ +I LC R+V +A ++ + ++ G+ P+
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF-SEMIHQGISPSIF 244
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+Y LI LC + + + EMV P++ I+S +D KEG V
Sbjct: 245 TYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKV 294
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 128/294 (43%), Gaps = 32/294 (10%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK--- 238
D+V M++ RG+ V T NAL+ G + S + +VF D+ G DV
Sbjct: 299 DVVDMMIKRGVEPNVVTYNALM----DGHCLRSEMDEAVKVF--DTMVCKGFAPDVVSYS 352
Query: 239 -------RVVRVR---------------PNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
++ R+ PN T++ LM G G + ++ EM
Sbjct: 353 TLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTR 412
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G PD SY +L+ C+ RR+ EA L + + N++ D+ Y +I G C GE+ A
Sbjct: 413 GQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAA 472
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ F + G+ + T+ ++NG C+ G + A ++ +M RKG+ P G T ++
Sbjct: 473 RDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRG 532
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+ +L+ + + G + L++ L ++G + ++ +E +
Sbjct: 533 FLRNNETLRGIQLLQEMLAR-GFSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 585
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G P T+ +LI C +R+ A +L A+++K G P ++ LI+GLC EGK+ E
Sbjct: 98 GIPPNIYTLNILINSFCHLQRLGFAFSVL-AKILKLGHQPNIATFNTLIRGLCVEGKIGE 156
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
L + +M+G+GF+P++ Y I+G K G+ A L + M
Sbjct: 157 VLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM 199
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 130/246 (52%), Gaps = 1/246 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V F+ ++ +EG + DV M G EP+ +Y+ LM C + M EA
Sbjct: 272 KIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEA 331
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+++ M +V++YNT+I G+C+I M +A F EM + ++VT+ L++G
Sbjct: 332 VKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHG 391
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C G + AI ++++M G P+ +T +L+ LC K + EA+ +LK + + P
Sbjct: 392 LCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT-IEGSNMDP 450
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ Y +I G+C G++E A + + + KG P++ Y+ I+G + G ++ A L
Sbjct: 451 DIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLF 510
Query: 482 KEMFEN 487
EM N
Sbjct: 511 MEMDGN 516
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 1/250 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ + V PNV T+NALM G + ++ V+ M G P+ SY+ L+ +C+
Sbjct: 301 DMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKI 360
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+RM +A L+EEM K + + V YNT++ G C +G + A F EM G T+
Sbjct: 361 QRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATY 420
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++ C+ +D A+ + + +P+ ++I +C + A DI
Sbjct: 421 RILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSS 480
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K GL P ++Y +I GLC G ++EA K+ EM G G P Y+ G ++
Sbjct: 481 K-GLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEAL 539
Query: 476 MATMLRKEMF 485
A L +EM
Sbjct: 540 RAIQLLQEML 549
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 124/245 (50%), Gaps = 5/245 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+ +L+ ++ V + +M PD +S ++ C+E ++ EA
Sbjct: 238 ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAH 297
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M + VE +VV YN ++ G C EM A + F M +G + +++ L+NGY
Sbjct: 298 DVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGY 357
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ +D A ++ +MC+K P T L+ LC R+ +A+ + +V G P
Sbjct: 358 CKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFH-EMVAHGQIPD 416
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ LC++ ++EA+ + + G +P ++IY+ IDG + G +E A +
Sbjct: 417 LATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAA----R 472
Query: 483 EMFEN 487
++F N
Sbjct: 473 DIFSN 477
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 121/241 (50%), Gaps = 1/241 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+V + +++ ++ + +++ +M G PD ++Y+ L+ C +
Sbjct: 204 QPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTT 263
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +M + + DVV ++T++ C+ G++ A + M + GVE + VT+ L++G+C
Sbjct: 264 LLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHC 323
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
++D A+ V++ M G+ P + LI C +R+ +A + + K L P
Sbjct: 324 LQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQK-ELIPNT 382
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ GLC G++++A+ + EMV G P L Y +D K+ +++ A L K
Sbjct: 383 VTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 442
Query: 484 M 484
+
Sbjct: 443 I 443
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ TF L+ G EG ++ +M G +P+ +Y L+ C+ A
Sbjct: 133 LQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAI 192
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L M N + DVV Y +II C+ ++ A F +M G+ T+ L++
Sbjct: 193 RLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSL 252
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C + + N M P+ ++ LC + ++ EA D++ +++ G+ P
Sbjct: 253 CNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIR-GVEPN 311
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G C + +M+EA+KV MV G+ P++ Y+ I+GY K ++ AT L +
Sbjct: 312 VVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFE 371
Query: 483 EMFENQV 489
EM + ++
Sbjct: 372 EMCQKEL 378
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 110/233 (47%), Gaps = 1/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ FN L+ + + V + +M G PD Y+ ++L+ FC R A +
Sbjct: 65 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ ++ D + T+I G C G++ A F +M G + + VT+ L+NG C+
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ ++AI + M + +P+ +I LC R+V EA ++ +++V G+ P
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLF-SKMVGQGISPDIF 243
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI LC + + + +M+ P + I+S +D KEG + A
Sbjct: 244 TYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEA 296
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 2/200 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N LM G G + ++ EM G PD +Y +L+ C++ + EA L
Sbjct: 380 PNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMAL 439
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + N++ D+ Y +I G C GE+ A + F + G+ + T+ ++NG CR
Sbjct: 440 LKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCR 499
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +D A ++ +M G P+G T + L + A+ +L+ + + G
Sbjct: 500 RGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLAR-GFSADVS 558
Query: 425 SYMFLIKGLCEEGKMEEALK 444
+ L++ LC++ K+++++K
Sbjct: 559 TTTLLVEMLCDD-KLDQSVK 577
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
S+V F L+ + + + N M G P+ T+ +LI C R A +L
Sbjct: 66 STVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVL 125
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
A+++K GL P ++ LI+GLC EGK+ +AL + +M+G+GF+P++ Y I+G K
Sbjct: 126 -AKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184
Query: 471 EGNVEMATMLRKEM 484
GN A L + M
Sbjct: 185 VGNTNAAIRLLRSM 198
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RPNV T+ ++ G R G ++ +++EM GC PD +Y+ + + + A
Sbjct: 483 LRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAI 542
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+L +EM + DV ++ C+
Sbjct: 543 QLLQEMLARGFSADVSTTTLLVEMLCD 569
>gi|356509602|ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 598
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 185/425 (43%), Gaps = 40/425 (9%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI 128
LTP+ ++ L + P+L +F F +HK HS +Y+ ++ L R+ L A+ V+
Sbjct: 36 LTPSLVYEVVNRL-HIPNLGFKFVEFCRHKLHMSHSYLTYSLLLRSLCRSNLHHTAK-VV 93
Query: 129 RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLM 188
+R P +L LV +Y G +++ +++ +
Sbjct: 94 YDWMRCDGQIPDNRLLGFLVWSYAIVG--------------------RLDVSRELLADVQ 133
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVH 248
+ V N L + R V+ ++RE+ L R +P +
Sbjct: 134 CNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRL----------------RYKPVTY 177
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T N LM G R G ++ + ++ GC PD +Y+ L+ C + A L +E+
Sbjct: 178 TVNILMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEV 237
Query: 309 -RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
+ DVV+Y TII G+C+ +M F EM SG ++ TF L+ G+ + GD
Sbjct: 238 CLNGEFAPDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGD 297
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+ SA+ +Y M +G P+ +T LI +V +A+D+ K + T ++
Sbjct: 298 MASALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDK-NIGATLYTFS 356
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
L+ GLC ++ +A + + P IY+ IDGY K GNV+ A + EM N
Sbjct: 357 VLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVN 416
Query: 488 QVRQE 492
+ + +
Sbjct: 417 RCKPD 421
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 1/202 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TFNAL+ GF + G ++ +M GC PD +++ L+ + ++ +A +
Sbjct: 280 PNTFTFNALIGGFGKLGDMASALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDM 339
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W +M DKN+ + ++ ++ G C + +A + R + S + + +++GYC+
Sbjct: 340 WHKMNDKNIGATLYTFSVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCK 399
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G+VD A + +M +P+ T +LI C K R+ EA+ I +++ G P E
Sbjct: 400 SGNVDEANKIVAEMEVNRCKPDKLTFTILIIGHCMKGRMPEAIGIFH-KMLAVGCAPDEI 458
Query: 425 SYMFLIKGLCEEGKMEEALKVQ 446
+ L L + G EA +V+
Sbjct: 459 TVNNLRSCLLKAGMPGEAARVK 480
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 124/242 (51%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P V T+ L+ G KVE V+ EM D Y YS ++ +C +R A
Sbjct: 209 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 268
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++++E +E + Y +I GFC+IG+M AE +M + GV + + F +++GY
Sbjct: 269 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 328
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR VD A+ + M + G E + T L L R+ EA ++L+ + K G+ P
Sbjct: 329 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEK-GVRPN 387
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY LI C EG M EA ++ EM G G EPSL Y+ +DGY+K+G++ A +
Sbjct: 388 HVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKN 447
Query: 483 EM 484
EM
Sbjct: 448 EM 449
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 114/220 (51%), Gaps = 1/220 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N FN ++ G+ R+ +K ++ + M ++G E D Y+Y+ L RM EA+ L
Sbjct: 317 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 376
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M +K V + V+Y T+I C G+M A FREM +G E S VT+ +++GY +
Sbjct: 377 RIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKK 436
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + A N+M +KG P+ + L+ C +V AL + + + + G P +
Sbjct: 437 GSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFE-EMKQRGSKPNLVA 495
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
Y LI GL +EG+ EEA ++ M+G G P +YSA +
Sbjct: 496 YTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 156/350 (44%), Gaps = 22/350 (6%)
Query: 147 LVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
++K G P V + +L+ ++I K+E + + S+ LS V +++I
Sbjct: 200 MLKVMENEGIEPTVGTYTILVDGLSAARDITKVEA---VFEEMKSKNLSGDVYFYSSVIN 256
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
R V E++ E G + PN HT+ AL+ GF + G E
Sbjct: 257 AYCRAGNVRRASEVFDECVGNG----------------IEPNEHTYGALINGFCKIGQME 300
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
E + +M G + ++ ++ +C + + +A ++ M +E DV YNT+
Sbjct: 301 AAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLA 360
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G M A+ R M GV + V++ L++ +C GD+ A ++ +M G E
Sbjct: 361 CGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAE 420
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P T V++ K + EA + K + K GL P SY L+ G C GK++ AL+
Sbjct: 421 PSLVTYNVMMDGYIKKGSIREA-ERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALR 479
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+ EM +G +P+L Y+A I G KEG E A L M + + +D
Sbjct: 480 LFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDA 529
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 1/235 (0%)
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G+ + G + EM R G + + Y+ L+ + E+ ++ + M ++ +E
Sbjct: 152 GYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEP 211
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
V Y ++ G ++ + E F EM + + ++N YCRAG+V A V+
Sbjct: 212 TVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVF 271
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
++ G EP T LI C K EA ++L + G+ + + +I G C
Sbjct: 272 DECVGNGIEPNEHTYGALINGFC-KIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 330
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+ +++AL+++ M G E + Y+ G + ++ A L + M E VR
Sbjct: 331 KNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVR 385
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 7/197 (3%)
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
S SV++ +C+ R+ A +L +EM V+ + + YN+++ + + R E + M
Sbjct: 145 SASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVM 204
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DK 400
G+E + T+ LV+G A D+ V+ +M K + +I C +
Sbjct: 205 ENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNV 264
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
RR E D V G+ P E +Y LI G C+ G+ME A + +M +G + +
Sbjct: 265 RRASEVFD----ECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIV 320
Query: 461 YSAFIDGYMKEGNVEMA 477
++ IDGY ++ V+ A
Sbjct: 321 FNTMIDGYCRKNMVDKA 337
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 157/304 (51%), Gaps = 17/304 (5%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
+G+ V T ++LI + G ++ RE+ G + + P+V T
Sbjct: 303 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN----------------IIPDVVT 346
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F+AL+ F +EG + ++++ EM G PD +Y+ L+ FC+E + EA ++++ M
Sbjct: 347 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 406
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K E D+V Y+ +I +C+ + FRE+ G+ +++T+ LV G+C++G ++
Sbjct: 407 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 466
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+A ++ +M +G P T +L+ LCD + +AL+I + ++ K + Y +
Sbjct: 467 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE-KMQKSRMTLGIGIYNII 525
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I G+C K+++A + + KG +P + Y+ I G K+G++ A ML ++M E+
Sbjct: 526 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 585
Query: 490 RQED 493
+D
Sbjct: 586 TPDD 589
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 127/245 (51%), Gaps = 5/245 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ +V ++ ++ ++G+F+ ++ EM G + D +YS L+ C + + +
Sbjct: 269 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 328
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+ EM +N+ DVV ++ +I F + G++ A+E + EM G+ ++T+ L++G
Sbjct: 329 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 388
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C+ + A +++ M KG EP+ T +LI C +RV + + + + + GL P
Sbjct: 389 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR-EISSKGLIP 447
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y L+ G C+ GK+ A ++ EMV +G PS+ Y +DG G + A
Sbjct: 448 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL--- 504
Query: 482 KEMFE 486
E+FE
Sbjct: 505 -EIFE 508
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 123/247 (49%), Gaps = 5/247 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ TF+ L+ GF EG + + M + PD + S L+ C + R+ EA L
Sbjct: 167 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 226
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + + D V Y ++ C+ G A A + FR+M +++S V + +++ C+
Sbjct: 227 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 286
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G D A+ ++N+M KG + + T LIG LC+ + + +L+ + + + P
Sbjct: 287 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVV 345
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI +EGK+ EA ++ EM+ +G P Y++ IDG+ KE + A +M
Sbjct: 346 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN----QM 401
Query: 485 FENQVRQ 491
F+ V +
Sbjct: 402 FDLMVSK 408
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 124/258 (48%), Gaps = 3/258 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
S+A A + + V+ ++ RP++ T + L+ G +G + + M G +PD +Y
Sbjct: 186 SEAVALVDRMVE--MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 243
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ C+ A L+ +M ++N++ VV Y+ +I C+ G A F EM +
Sbjct: 244 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 303
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+++ VT+ L+ G C G D + +M + P+ T LI + ++ EA
Sbjct: 304 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 363
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
++ + + G+ P +Y LI G C+E + EA ++ MV KG EP + YS I+
Sbjct: 364 KELYNEMITR-GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 422
Query: 467 GYMKEGNVEMATMLRKEM 484
Y K V+ L +E+
Sbjct: 423 SYCKAKRVDDGMRLFREI 440
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 117/278 (42%), Gaps = 34/278 (12%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P FN L R ++ V M G E D Y+ ++++ +C ++++ A
Sbjct: 94 RPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFA 153
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ E D + ++T++ GFC G ++ A M VT L+NG
Sbjct: 154 FSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLING 213
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI--------LKAR 413
C G V A+++ + M GF+P+ T ++ LC ALD+ +KA
Sbjct: 214 LCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 273
Query: 414 VVKF--------------------------GLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
VV++ G+ +Y LI GLC +GK ++ K+
Sbjct: 274 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 333
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
EM+G+ P + +SA ID ++KEG + A L EM
Sbjct: 334 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 371
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 51/260 (19%)
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
+++S+G + T + LI + K V G ++RE+ ++ G+ P
Sbjct: 404 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI------SSKGL----------IP 447
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+N L++GF + G ++++ EM G P +Y +L+ C+ + +A +++
Sbjct: 448 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 507
Query: 306 EEMR-----------------------------------DKNVEHDVVAYNTIIGGFCEI 330
E+M+ DK V+ DVV YN +IGG C+
Sbjct: 508 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 567
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G ++ A+ FR+M G T+ L+ + + S++ + +M GF + STI
Sbjct: 568 GSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 627
Query: 391 EVLIGELCDKRRVFEALDIL 410
+++I L D+R LD+L
Sbjct: 628 KMVIDMLSDRRLDKSFLDML 647
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 1/194 (0%)
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
++ +A L+E M + +N + + F + M L+G+E T
Sbjct: 79 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
++N YCR + A V + G+EP+ T L+ C + RV EA+ ++ R+V+
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD-RMVE 197
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
P + LI GLC +G++ EAL + MV GF+P Y ++ K GN +
Sbjct: 198 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 257
Query: 477 ATMLRKEMFENQVR 490
A L ++M E ++
Sbjct: 258 ALDLFRKMEERNIK 271
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 161/317 (50%), Gaps = 20/317 (6%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDA--- 229
++ V +V ++ G + NA+I + + + V + ++E+ G+ +
Sbjct: 169 NRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTY 228
Query: 230 --------TAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
+G D R++R + PNV T++AL+ F + G + ++++ EM R
Sbjct: 229 TALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVR 288
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
+ +PD +YS L+ C R+ EA ++++ M K DVV+YNT+I GFC+ +
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVED 348
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
+ FR+M G+ +++VT+ L+ G+ + GDVD A ++ M G P+ T +L+G
Sbjct: 349 GMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLG 408
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
LCD + +AL I + + K + +Y +I+G+C+ GK+E+A + + KG +
Sbjct: 409 GLCDNGLLEKALVIFED-MQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLK 467
Query: 456 PSLEIYSAFIDGYMKEG 472
P + Y+ + G +G
Sbjct: 468 PDIVTYTTMMSGLCTKG 484
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 130/257 (50%), Gaps = 2/257 (0%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
D +GK ++ V+ +R +++TFN ++ F V +M +LG EPD +
Sbjct: 102 DVVISLGKKME-VLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGS 160
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ FC R+ +A L ++M + D+VAYN II C+ + A +FF+E+G G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKG 220
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ + VT+ LVNG C +G + A + DM ++ P T L+ +V EA
Sbjct: 221 IRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+I + +V+ + P +Y LI GLC +++EA ++ MV KG P + Y+ I+G
Sbjct: 281 EIFE-EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLING 339
Query: 468 YMKEGNVEMATMLRKEM 484
+ K VE L ++M
Sbjct: 340 FCKAKRVEDGMKLFRKM 356
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 5/223 (2%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
+++ EM + P ++ L++ + ++ L ++M + +D+ +N +I F
Sbjct: 71 NLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 130
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C +++ A +M G E VT LVNG+CR V A+ + + M G+ P+
Sbjct: 131 CCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDI 190
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+I LC RRV +ALD K + + G+ P +Y L+ GLC G+ +A ++
Sbjct: 191 VAYNAIIDSLCKTRRVNDALDFFK-EIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLR 249
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+M+ + P++ YSA +D ++K G V A KE+FE VR
Sbjct: 250 DMIKRKITPNVITYSALLDAFVKNGKVLEA----KEIFEEMVR 288
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 111/223 (49%), Gaps = 16/223 (7%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
++I+ + +++S+G V + N LI + K V G +++R++ + G+
Sbjct: 309 DRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKM------SQRGLV 362
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
N T+N L+ GF++ G +K ++ + +M G PD ++Y++L+ C+
Sbjct: 363 N----------NTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCD 412
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ +A ++E+M+ ++ D+V Y T+I G C+ G++ A F + L G++ VT
Sbjct: 413 NGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVT 472
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+ +++G C G +Y M ++G S + + G++
Sbjct: 473 YTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSMLCLGDGDI 515
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 185/390 (47%), Gaps = 44/390 (11%)
Query: 120 LIGPARDVIRVALRSPEN--DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEK- 176
L G + + + R EN P + + +V G DLL K +E +N++
Sbjct: 160 LEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK--MEERNVKAD 217
Query: 177 ----------------IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
I+ + + + + ++G+ V T N+L+ + + G + +
Sbjct: 218 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 277
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
++ + + PNV TFN L+ F +EG ++ +++ EM G P
Sbjct: 278 DMVSRE----------------IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 321
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+ +Y+ LM +C + R+ EA + + M D+V + ++I G+C + + + F
Sbjct: 322 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 381
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
R + G+ +++VT+ LV G+C++G + A ++ +M G P+ T +L+ LCD
Sbjct: 382 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 441
Query: 401 RRVFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
++ +AL+I L+ + G+ Y +I+G+C+ GK+E+A + + KG +P+
Sbjct: 442 GKLEKALEIFEDLQKSKMDLGIV----MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 497
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ Y+ I G K+G++ A +L ++M E+
Sbjct: 498 VMTYTVMISGLCKKGSLSEANILLRKMEED 527
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 1/224 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ TFN L+ G + EG + + M GC+PD +Y+ ++ C A L
Sbjct: 146 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 205
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M ++NV+ DV Y+TII C G + A F+EM G++SS VT+ LV G C+
Sbjct: 206 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 265
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG + L+ DM + P T VL+ + ++ EA ++ K + + G+ P
Sbjct: 266 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNII 324
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+Y L+ G C + ++ EA + MV P + +++ I GY
Sbjct: 325 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 368
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 79/149 (53%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T++ L+ GF + G + E+++ EM G PD +Y +L+ C+ ++ +A +++
Sbjct: 392 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 451
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E+++ ++ +V Y TII G C+ G++ A F + GV+ + +T+ +++G C+
Sbjct: 452 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 511
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
G + A ++ M G P T LI
Sbjct: 512 GSLSEANILLRKMEEDGNAPNDCTYNTLI 540
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 97/224 (43%), Gaps = 7/224 (3%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
++ EM R P +S + ++ +++ + H++ N +I FC
Sbjct: 65 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 124
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ A ++ G E + TF L+ G G V A+++ + M G +P+
Sbjct: 125 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 184
Query: 389 TIEVLIGELCDKRRVFEALDILKA---RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
T ++ +C ALD+L+ R VK +F +Y +I LC +G ++ A+ +
Sbjct: 185 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF----TYSTIIDSLCRDGCIDAAISL 240
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EM KG + S+ Y++ + G K G +L K+M ++
Sbjct: 241 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 284
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 114/255 (44%), Gaps = 21/255 (8%)
Query: 143 LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
+ +++V+ +C F LIK VK +++ + + R + RGL T + L
Sbjct: 345 MLDLMVRN--KCSPDIVTFTSLIKGYCMVK---RVDDGMKVFRNISKRGLVANAVTYSIL 399
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
+ + + E+++E+ V P+V T+ L+ G G
Sbjct: 400 VQGFCQSGKIKLAEELFQEMVSHG----------------VLPDVMTYGILLDGLCDNGK 443
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
EK +++ ++ + + Y+ ++ C+ ++ +A L+ + K V+ +V+ Y
Sbjct: 444 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 503
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G C+ G ++ A R+M G + T+ L+ + R GD+ ++ + +M G
Sbjct: 504 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 563
Query: 383 FEPEGSTIEVLIGEL 397
F + S+I+++I L
Sbjct: 564 FSADASSIKMVIDML 578
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK----GFEPEGSTIEVLI 394
F+EM S S V F + R + + D C++ G T+ ++I
Sbjct: 65 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVL----DFCKQLELNGIAHNIYTLNIMI 120
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
C + A +L +V+K G P ++ LIKGL EGK+ EA+ + MV G
Sbjct: 121 NCFCRCCKTCFAYSVL-GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+P + Y++ ++G + G+ +A L ++M E V+ +
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 217
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 216/496 (43%), Gaps = 72/496 (14%)
Query: 33 PPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS----GLTPTQFSQIALGLKNNPHLA 88
PPS N + T ++ HH + LLSL R G+ P ++ +A+ + + HL
Sbjct: 67 PPSTVDFNRLLTSIAKTKHHST------LLSLSRQMDSFGIPPDVYT-LAIVINSLCHLN 119
Query: 89 LRFFSFTQHKSLCK----HSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF 144
F+F+ + K +++ T+I L IG A L LF
Sbjct: 120 RVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEA----------------LHLF 163
Query: 145 EVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
+ ++ G P V + LI +V N + ++R + V + L
Sbjct: 164 DKMIGE----GFQPNVVTYGTLINGLCKVGNTS---AAIRLLRSMEQGNCQPNVVVFSTL 216
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV----------------KRVV----- 241
I + + + V + I+ E+ T GI ++ K V
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMI------TKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNE 270
Query: 242 ----RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
++ P+V T N ++ +EG + DV M G EP+ +Y+ LM C
Sbjct: 271 MVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNE 330
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A K+++ M K+ +V++YNT+I G+C+I + +A F EM + ++VT+
Sbjct: 331 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 390
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++G C G + AI ++++M +G P+ T L LC R + +A+ +LKA +
Sbjct: 391 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA-IEGS 449
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P + Y ++ G+C G++E+A + + + KG +P++ Y+ I G K+G + A
Sbjct: 450 NWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEA 509
Query: 478 TMLRKEMFENQVRQED 493
+ L EM +N D
Sbjct: 510 SKLFSEMNKNGCSPND 525
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 120/525 (22%), Positives = 219/525 (41%), Gaps = 87/525 (16%)
Query: 9 IIFSVSKPKPKPQLLS--QFSTSSSTPPSDQSHNLIATVVSLLTH-HRSKSRWNHLLSLC 65
++ S++K K LLS + S PP + +A V++ L H +R ++ L +
Sbjct: 76 LLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYT---LAIVINSLCHLNRVDFAFSALAKIL 132
Query: 66 RSGLTP--TQFSQIALGLKNNPHL--ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLI 121
+ G P T F+ + GL + AL F + + ++ +Y T+I+ L + +
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF-QPNVVTYGTLINGLCK---V 188
Query: 122 GPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCV 181
G IR+ LRS E C VF LI + + + +
Sbjct: 189 GNTSAAIRL-LRSMEQG--------------NCQPNVVVFSTLIDSLCKDRQVTE---AF 230
Query: 182 DIVRMLMSRGLSVKVSTCNALI--------WE-VSRGKGVISGYEIYREVFGLDSDATA- 231
+I ++++G+S + T N+LI W+ V+ + +I +VF L++ A
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290
Query: 232 ---GIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
G+ + VV V PNV T+NALM G + V+ M C +
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
SY+ L+ +C+ + + +A L+EEM + + + V YNT+I G C +G + A F E
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410
Query: 343 MGLSGVESSSVTFEHL-----------------------------------VNGYCRAGD 367
M G VT+ L ++G CRAG+
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
++ A +++++ KG +P T ++I LC + + EA + + + K G P + +Y
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLF-SEMNKNGCSPNDCTYN 529
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ +G + +++ EM+ +GF + + + +G
Sbjct: 530 LITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 123/288 (42%), Gaps = 33/288 (11%)
Query: 182 DIVRMLMSRGLSVKVSTCNAL-------------------------IWEVSRGKGVISGY 216
D+V M++ RG+ V T NAL + V +I+GY
Sbjct: 301 DVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGY 360
Query: 217 EIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+ V D + +++ R + PN T+N L+ G G + ++ EM
Sbjct: 361 CKIQSV-----DKAMYLFEEMSRQ-ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVAR 414
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G PD +Y L C+ R + +A L + + N + D+ Y TI+ G C GE+ A
Sbjct: 415 GQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDA 474
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ F + G++ + T+ +++G C+ G + A ++++M + G P T ++
Sbjct: 475 RDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRG 534
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
+++L+ + + F + S L+ G+ + +++++K
Sbjct: 535 FLRNNEALRTIELLEEMLARG--FSVDVSTTTLLVGMLSDDGLDQSVK 580
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 1/188 (0%)
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ EA + M K V +N ++ + + R+M G+ T
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
++N C VD A + + G +P+ +T LI LC + ++ EAL + +++
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFD-KMIGE 169
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P +Y LI GLC+ G A+++ M +P++ ++S ID K+ V A
Sbjct: 170 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA 229
Query: 478 TMLRKEMF 485
+ EM
Sbjct: 230 FNIFSEMI 237
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 216/496 (43%), Gaps = 72/496 (14%)
Query: 33 PPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS----GLTPTQFSQIALGLKNNPHLA 88
PPS N + T ++ HH + LLSL R G+ P ++ +A+ + + HL
Sbjct: 67 PPSTVDFNRLLTSIAKTKHHST------LLSLSRQMDSFGIPPDVYT-LAIVINSLCHLN 119
Query: 89 LRFFSFTQHKSLCK----HSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF 144
F+F+ + K +++ T+I L IG A L LF
Sbjct: 120 RVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEA----------------LHLF 163
Query: 145 EVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
+ ++ G P V + LI +V N + ++R + V + L
Sbjct: 164 DKMIGE----GFQPNVVTYGTLINGLCKVGNTS---AAIRLLRSMEQGNCQPNVVVFSTL 216
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV----------------KRVV----- 241
I + + + V + I+ E+ T GI ++ K V
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMI------TKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNE 270
Query: 242 ----RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
++ P+V T N ++ +EG + DV M G EP+ +Y+ LM C
Sbjct: 271 MVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNE 330
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A K+++ M K+ +V++YNT+I G+C+I + +A F EM + ++VT+
Sbjct: 331 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 390
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++G C G + AI ++++M +G P+ T L LC R + +A+ +LKA +
Sbjct: 391 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA-IEGS 449
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P + Y ++ G+C G++E+A + + + KG +P++ Y+ I G K+G + A
Sbjct: 450 NWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEA 509
Query: 478 TMLRKEMFENQVRQED 493
+ L EM +N D
Sbjct: 510 SKLFSEMNKNGCSPND 525
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 120/525 (22%), Positives = 219/525 (41%), Gaps = 87/525 (16%)
Query: 9 IIFSVSKPKPKPQLLS--QFSTSSSTPPSDQSHNLIATVVSLLTH-HRSKSRWNHLLSLC 65
++ S++K K LLS + S PP + +A V++ L H +R ++ L +
Sbjct: 76 LLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYT---LAIVINSLCHLNRVDFAFSALAKIL 132
Query: 66 RSGLTP--TQFSQIALGLKNNPHL--ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLI 121
+ G P T F+ + GL + AL F + + ++ +Y T+I+ L + +
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF-QPNVVTYGTLINGLCK---V 188
Query: 122 GPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCV 181
G IR+ LRS E C VF LI + + + +
Sbjct: 189 GNTSAAIRL-LRSMEQG--------------NCQPNVVVFSTLIDSLCKDRQVTE---AF 230
Query: 182 DIVRMLMSRGLSVKVSTCNALI--------WE-VSRGKGVISGYEIYREVFGLDSDATA- 231
+I ++++G+S + T N+LI W+ V+ + +I +VF L++ A
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290
Query: 232 ---GIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
G+ + VV V PNV T+NALM G + V+ M C +
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
SY+ L+ +C+ + + +A L+EEM + + + V YNT+I G C +G + A F E
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410
Query: 343 MGLSGVESSSVTFEHL-----------------------------------VNGYCRAGD 367
M G VT+ L ++G CRAG+
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
++ A +++++ KG +P T ++I LC + + EA + + + K G P + +Y
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLF-SEMNKNGCSPNDCTYN 529
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ +G + +++ EM+ +GF + + + +G
Sbjct: 530 LITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 123/288 (42%), Gaps = 33/288 (11%)
Query: 182 DIVRMLMSRGLSVKVSTCNAL-------------------------IWEVSRGKGVISGY 216
D+V M++ RG+ V T NAL + V +I+GY
Sbjct: 301 DVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGY 360
Query: 217 EIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+ V D + +++ R + PN T+N L+ G G + ++ EM
Sbjct: 361 CKIQSV-----DKAMYLFEEMSRQ-ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVAR 414
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G PD +Y L C+ R + +A L + + N + D+ Y TI+ G C GE+ A
Sbjct: 415 GQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDA 474
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ F + G++ + T+ +++G C+ G + A ++++M + G P T ++
Sbjct: 475 RDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRG 534
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
+++L+ + + F + S L+ G+ + +++++K
Sbjct: 535 FLRNNEALRTIELLEEMLARG--FSVDVSTTTLLVGMLSDDGLDQSVK 580
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 1/188 (0%)
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ EA + M K V +N ++ + + R+M G+ T
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
++N C VD A + + G +P+ +T LI LC + ++ EAL + +++
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFD-KMIGE 169
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P +Y LI GLC+ G A+++ M +P++ ++S ID K+ V A
Sbjct: 170 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA 229
Query: 478 TMLRKEMF 485
+ EM
Sbjct: 230 FNIFSEMI 237
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 155/326 (47%), Gaps = 20/326 (6%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATA------- 231
V ++ + ++G ++ CN ++ + V + R++ FG ++D +
Sbjct: 166 VRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225
Query: 232 --------GIGKDVKRVVRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
+ + + +VRV PN+ TFN L+ R G FE+V +V +M+ GC PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
Y+ ++ C+E + A ++ M ++ +VV YNT++ G C AEE
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM VTF LV+ +C+ G VD I + M G P+ T +I C +
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ EA+ +LK+ + G P SY ++KGLC G+ +A ++ ++M+ +G P+ +
Sbjct: 406 LIDEAVMLLKS-MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTF 464
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFEN 487
+ I+ K+G VE A L K+M N
Sbjct: 465 NTLINFLCKKGLVEQAIELLKQMLVN 490
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV +N ++ G +++ E++ EM + C D ++++L+ FC+ +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L E+M DV+ Y T+I GFC+ G + A + M G + ++V++ ++ G
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C AG A + + M ++G P T LI LC K V +A+++LK +V G P
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPD 495
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY +I GL + GK EEAL++ MV KG P+ IYS+ +EG V +
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555
Query: 483 EMFENQVRQE 492
+ + +R +
Sbjct: 556 NIKDTTIRSD 565
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 7/256 (2%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V PN +TF ++ G G +V EM+ GC P Y V++ C R
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ ++ E M K D N ++ CE G + A R++ G E+ V++ ++
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 361 GYC---RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
G C R GDV+ + ++M R P T LIG LC + +FE + + A++ +
Sbjct: 225 GLCMAKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLC-RNGLFERVHEVLAQMSEH 280
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P + Y +I G+C+EG +E A ++ M G +P++ Y+ + G + A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340
Query: 478 TMLRKEMFENQVRQED 493
L EMF+ +D
Sbjct: 341 EELLSEMFQKDCPLDD 356
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 146/330 (44%), Gaps = 26/330 (7%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD---SDATAGI 233
+E +I+ + S GL V N ++ + + E+ E+F D D T I
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 234 GKD-------VKRVVRV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
D V RV+ + P+V T+ ++ GF +EG ++ + M+ G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C+P+ SY++++ C R +AE+L +M + + V +NT+I C+ G + +A
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG---STIEVLI 394
E ++M ++G +++ +++G +AG + A+ + N M KG P S+I +
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+V + D +K ++ Y +I LC+ + + A+ A MV G
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIR----SDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P+ Y+ I G EG + A L E+
Sbjct: 598 MPNESTYTMLIKGLASEGLAKEAQELLSEL 627
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 103/210 (49%), Gaps = 1/210 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN ++ ++ G G + E++ +M + GC P+ +++ L+ C++ + +A +
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L ++M D+++Y+T+I G + G+ A E M G+ +++ + +
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G V+ I +++++ + +I LC + A+D A +V G P E
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFF-AYMVSNGCMPNE 601
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+Y LIKGL EG +EA ++ +E+ +G
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 86/235 (36%), Gaps = 68/235 (28%)
Query: 317 VVAYNTIIGGFCEIGE--------------------------------MARAEEFFREMG 344
VVAYN ++ G+C G+ +A A E EM
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G + ++ CR+G +++ V M KG + +++ +C++ V
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKG-------------------------------- 432
EA+ +L+ ++ FG SY ++KG
Sbjct: 199 EAVGLLR-KLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257
Query: 433 ---LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LC G E +V A+M G P + +Y+ IDG KEG++E+A + M
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 207/469 (44%), Gaps = 37/469 (7%)
Query: 54 SKSRWNH--LLSLCRSGLTPTQFSQIALGLK-NNPHLALRFFSFTQHKSLCKHSLSSYAT 110
+K W H L S +TP +I +GL+ NN L +RFF + +S + L
Sbjct: 50 NKPNWEHDKTLKSLASHMTPHLAGKI-IGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQ 108
Query: 111 IIHILSRARLIGPARDVIRVALRSPENDPK--LKLFEVLVKTYRECG---SAPFVFDLLI 165
++ +L L G A+ + + ++ E+ +KL L E G S P LL+
Sbjct: 109 LLGVLVSRDLFGVAQKAVVLLIQECEDSENGVVKLMGAL-DGMTELGFRLSYPCYSTLLM 167
Query: 166 KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY-----R 220
CL N+ + V R +++ G + ++ + + G + E++ R
Sbjct: 168 --CLAKLNMGFVAFLV--YRRMVNEGFVLGGIDYRTVVNALCK-NGFVQAAEMFCCKVLR 222
Query: 221 EVFGLDSDATAGI------GKDVKRVVRV----------RPNVHTFNALMVGFYREGAFE 264
FGLD+ + D+ RV RPN T++ L+ G G E
Sbjct: 223 LGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLE 282
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ + EM GC+P +Y+VL+ C+ +A K+ +EM K +V Y +I
Sbjct: 283 EAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILI 342
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
C G++ A FR+M G+ +TF L+NGYC+ G V SA + + M + +
Sbjct: 343 DRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCK 402
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P T L+ LC + ++A +L+ RVV GL P +Y L+ G C+EG++ A
Sbjct: 403 PNIRTYNELMEGLCRVSKSYKAFLLLR-RVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 461
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+ M G EP ++A IDG K G +E A + M + + ++
Sbjct: 462 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDE 510
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 169/407 (41%), Gaps = 37/407 (9%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
A R F + C+ + +Y+ +IH L A + A ++ + P + + VL
Sbjct: 248 AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQ-LKQEMVEKGCQPSTRTYTVL 306
Query: 148 VKTYRECGSAPFVFDLL----IKCCLEVKNIE-------------KIETCVDIVRMLMSR 190
+K + G +L K C V N+ KIE + R ++
Sbjct: 307 IKAKCDIGMTDKAMKMLDEMATKAC--VPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 364
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTF 250
GL + T NALI + V+S +++ V +PN+ T+
Sbjct: 365 GLCPGIITFNALINGYCKEGWVVSAFQLL----------------SVMEKGNCKPNIRTY 408
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
N LM G R K + + G PD +Y++L+ FC+E ++ A ++ M
Sbjct: 409 NELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 468
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
+E D + +I G C++G + +A M G+ VTF L++G+C+ G
Sbjct: 469 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKD 528
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
++ +M T + L ++ EA +L +++K+GL P+ ++ LI
Sbjct: 529 VCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAML-GKMMKYGLVPSVVTHTILI 587
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+G C G+ +LK+ M G P++ Y+ I+G G VE A
Sbjct: 588 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA 634
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 121/242 (50%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNVHT+ L+ REG E+ V+ +M + G P +++ L+ +C+E + A +L
Sbjct: 333 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 392
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M N + ++ YN ++ G C + + +A R + +G+ VT+ LV+G+C+
Sbjct: 393 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 452
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G ++ A ++N M G EP+G T LI LC R+ +A IL +VK G+ E
Sbjct: 453 EGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGIL-GSMVKKGISLDEV 511
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI G C+ GK ++ + MV + ++ F+D K+ + A + +M
Sbjct: 512 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 571
Query: 485 FE 486
+
Sbjct: 572 MK 573
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 182/462 (39%), Gaps = 61/462 (13%)
Query: 58 WNHLLS-LCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATII--HI 114
+N L++ C+ G + F +++ K N +R ++ + LC+ S S A ++ +
Sbjct: 373 FNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYN-ELMEGLCRVSKSYKAFLLLRRV 431
Query: 115 LSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVK 172
+ L P R + + + +L + + + G P F F LI ++
Sbjct: 432 VDNGLL--PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLG 489
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
+E+ I+ ++ +G+S+ T ALI D G
Sbjct: 490 RLEQAN---GILGSMVKKGISLDEVTFTALI----------------------DGHCKIG 524
Query: 233 IGKDVKRVV------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
KDV + R HTFN + ++ + + +M + G P +++
Sbjct: 525 KAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHT 584
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
+L+ C + K+ E M+ +V Y II G C G + AE M
Sbjct: 585 ILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSF 644
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI------------ 394
GV + T+ LV + +AG +D A + + M + G +P L+
Sbjct: 645 GVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGA 704
Query: 395 ------GELCDKRRVFEALD--ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
G+L + E D L + K G+ PTE Y FL+ GLC+EG++ EA ++
Sbjct: 705 RALSSTGDLDARSLSSEENDNNCLSNEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLT 763
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+MV G P I S+ I+ Y K + K + +N+
Sbjct: 764 QDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNK 804
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 162/348 (46%), Gaps = 50/348 (14%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
I + + + ++RM+ R V N +I + + K V Y++Y E+ DA
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM-----DARG-- 180
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
+ PNV T++ L+ GF G + + EM P+ Y+Y++LM C
Sbjct: 181 ---------IFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALC 231
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+E +++EA+ L M + V+ +VV+YNT++ G+C IGE+ A++ F M GV +
Sbjct: 232 KEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVY 291
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK-- 411
++ +++ C++ VD A+ + ++ K P T LI C R+ ALD+LK
Sbjct: 292 SYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEM 351
Query: 412 ------ARVVKF--------------------------GLFPTEKSYMFLIKGLCEEGKM 439
A VV + G+ P + +Y LI GLC+ G+
Sbjct: 352 YHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRH 411
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ A K+ ++ KG ++ Y+ I G KEG ++ A ++ +M EN
Sbjct: 412 KNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEEN 459
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 137/275 (49%), Gaps = 7/275 (2%)
Query: 217 EIYREVFGLDSDATAGIGKDVKRVVRV------RPNVHTFNALMVGFYREGAFEKVEDVW 270
+Y +D+ G K+ K ++ V +PNV ++N LM G+ G + + ++
Sbjct: 219 NVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMF 278
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
M + G P+ YSY++++ C+ +R+ EA L E+ KN+ + V Y+++I GFC++
Sbjct: 279 HTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKL 338
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G + A + +EM G + VT+ L++ C+ ++D A ++ M +G +P T
Sbjct: 339 GRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTY 398
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
LI LC R A + + +VK G +Y +I GLC+EG ++EAL ++++M
Sbjct: 399 TALIDGLCKGGRHKNAQKLFQHLLVK-GCRINVWTYNVMISGLCKEGMLDEALAMKSKME 457
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
G P + I ++ + A L EM
Sbjct: 458 ENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMI 492
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 126/247 (51%), Gaps = 2/247 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN T N LM G +G +K ++ G + D SY+ L+ C+ R A K
Sbjct: 77 QPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALK 136
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L + D++ +VV YNTII G C+ + A + + EM G+ + +T+ L+ G+C
Sbjct: 137 LLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFC 196
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
AG + A + N+M K P T +L+ LC + +V EA ++L A + K G+ P
Sbjct: 197 LAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLL-AVMTKEGVKPNV 255
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA-TMLRK 482
SY L+ G C G+++ A ++ MV KG P++ Y+ ID K V+ A +LR+
Sbjct: 256 VSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLRE 315
Query: 483 EMFENQV 489
+ +N V
Sbjct: 316 VLHKNMV 322
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 128/253 (50%), Gaps = 5/253 (1%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
+V + P++ T N L+ F G V ++ +LG +P+ + + LM C + +
Sbjct: 37 QVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEV 96
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+++ +++ + + D V+Y T++ G C+IGE A + R + + V + +
Sbjct: 97 KKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTI 156
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++G C+ V+ A +Y++M +G P T LI C ++ EA +L ++K
Sbjct: 157 IDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILK-N 215
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ P +Y L+ LC+EGK++EA + A M +G +P++ Y+ +DGY G V+ A
Sbjct: 216 INPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNA- 274
Query: 479 MLRKEMFENQVRQ 491
K+MF V++
Sbjct: 275 ---KQMFHTMVQK 284
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 121/254 (47%), Gaps = 7/254 (2%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
+VR P + FN ++ + + ++ +M G EPD ++ ++L+ FC +M
Sbjct: 3 LVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMT 62
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+ + ++ + + + NT++ G C GE+ ++ F ++ G + V++ L+
Sbjct: 63 FSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLL 122
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVK 416
NG C+ G+ SA+ + + + P +I LC + V EA D+ + AR
Sbjct: 123 NGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDAR--- 179
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G+FP +Y LI G C G++ EA + EM+ K P++ Y+ +D KEG V+
Sbjct: 180 -GIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKE 238
Query: 477 ATMLRKEMFENQVR 490
A L M + V+
Sbjct: 239 AKNLLAVMTKEGVK 252
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 132/285 (46%), Gaps = 30/285 (10%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
I +++ + ++ +G++ V + N +I + + K V + REV
Sbjct: 268 IGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLH--------- 318
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
K +V PN T+++L+ GF + G D+ EM G D +Y+ L+ C
Sbjct: 319 ----KNMV---PNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALC 371
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + + +A L+ +M+++ ++ + Y +I G C+ G A++ F+ + + G +
Sbjct: 372 KNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVW 431
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ +++G C+ G +D A+ + + M G P+ T E++I L +K + +A +L
Sbjct: 432 TYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM 491
Query: 414 VVK----FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+ K F F E+S + ++A K+ EM+ KG
Sbjct: 492 IAKDLLRFRDFHGERS----------PNENDKAEKLLHEMIAKGL 526
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 128/254 (50%), Gaps = 1/254 (0%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
R + P+ + ++ GF R G V EM GC PD +Y+ L+ C+ERR+
Sbjct: 8 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 67
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+AE L EMR++ V D+ + T+I G+C G++ +A + F M + VT+ L
Sbjct: 68 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 127
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++G CR GD+D A +++DM + P T +LI C+K +V +A L + K G
Sbjct: 128 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK-G 186
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ P +Y +IKG C G + + K +M+ P L Y+ I GY+KE + A
Sbjct: 187 ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAF 246
Query: 479 MLRKEMFENQVRQE 492
L M + +V+ +
Sbjct: 247 KLLNMMEKEKVQPD 260
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 118/216 (54%), Gaps = 1/216 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+RP++ T+N L+ G R+G +K D+W +M P+ +YS+L+ CE+ ++ +A
Sbjct: 116 RLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 175
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+EM +K + +++ YN+II G+C G +++ ++F ++M ++ V +T+ L++G
Sbjct: 176 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 235
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
Y + + A + N M ++ +P+ T +LI V EA I + K G+ P
Sbjct: 236 YIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK-GIEP 294
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+YM +I G G +EA ++ EM+ +GF P
Sbjct: 295 DRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 111/224 (49%), Gaps = 7/224 (3%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM G PD Y++++ FC M +A ++ +EM DVV YNT++ G C+
Sbjct: 6 EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 65
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ AE EM GV TF L++GYC G +D A+ +++ M + P+ T
Sbjct: 66 RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 125
Query: 392 VLIGELC---DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
LI +C D + + D + +R + FP +Y LI CE+G++E+A E
Sbjct: 126 TLIDGMCRQGDLDKANDLWDDMHSREI----FPNHVTYSILIDSHCEKGQVEDAFGFLDE 181
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
M+ KG P++ Y++ I GY + GNV ++M N+V +
Sbjct: 182 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 225
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P++ TF L+ G+ EG +K ++ M PD +Y+ L+ C + + +A
Sbjct: 82 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 141
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
LW++M + + + V Y+ +I CE G++ A F EM G+ + +T+ ++ GY
Sbjct: 142 DLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY 201
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR+G+V M P+ T LI + ++ +A +L + K + P
Sbjct: 202 CRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM-MEKEKVQPD 260
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI G G ++EA + +M KG EP Y + I+G++ GN + A L
Sbjct: 261 VVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHD 320
Query: 483 EMFENQVRQED 493
EM + +D
Sbjct: 321 EMLQRGFAPDD 331
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 136/305 (44%), Gaps = 40/305 (13%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C + +Y T+++ L + R + A ++ +R P L F L+ Y
Sbjct: 47 CLPDVVTYNTLLNGLCKERRLLDAEGLLN-EMRERGVPPDLCTFTTLIHGY--------- 96
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY- 219
C+E K++ + + ++++ L + T N LI + R + +++
Sbjct: 97 -------CIE----GKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWD 145
Query: 220 ----REVFG--------LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREG 261
RE+F +DS G +D + + PN+ T+N+++ G+ R G
Sbjct: 146 DMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSG 205
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
K + +M PD +Y+ L+ + +E +M +A KL M + V+ DVV YN
Sbjct: 206 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYN 265
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
+I GF G + A F +M G+E T+ ++NG+ AG+ A ++++M ++
Sbjct: 266 MLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 325
Query: 382 GFEPE 386
GF P+
Sbjct: 326 GFAPD 330
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
+ REM G+ V + ++ G+CRAG + A+ V ++M G P+ T L+ LC
Sbjct: 3 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 62
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+RR+ +A +L + + G+ P ++ LI G C EGK+++AL++ M+ + P +
Sbjct: 63 KERRLLDAEGLLN-EMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 121
Query: 459 EIYSAFIDGYMKEGNVEMAT-----MLRKEMFENQV 489
Y+ IDG ++G+++ A M +E+F N V
Sbjct: 122 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV 157
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 127/247 (51%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN+ TFN + G R+GA ++ + + G PD SY+ L+ FC+ ++ EAE
Sbjct: 247 VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAE 306
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+M + VE + YNTII GFC+ G M A++ R+ G T+ L+NG
Sbjct: 307 CYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGL 366
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C GD++ A+ V+ + KGF+ L+ L + V +AL ++K +++ G P
Sbjct: 367 CNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMK-DMMEHGCSPD 425
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y ++ GLC+ G + +A + + + KG P + ++ IDGY K+ N++ A +
Sbjct: 426 IWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILD 485
Query: 483 EMFENQV 489
M + +
Sbjct: 486 TMLSHGI 492
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 119/237 (50%), Gaps = 4/237 (1%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N L+ G ++G + + +M GC PD ++Y++++ C+ + +A + +
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI 453
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K D+ +NT+I G+C+ M +A E M G+ +T+ L+NG C+A +D
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLD 513
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+ + + M KG P T +LI C R+V EA+++ K + GL P + L
Sbjct: 514 NVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR-GLTPDIVTLCTL 572
Query: 430 IKGLCEEGKMEEA--LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
I GLC G++++A L V E K F S I++ I+ + ++ NV MA L +M
Sbjct: 573 ICGLCSNGELDKAYELFVTIEKEYK-FSYSTAIFNIMINAFCEKLNVSMAEKLFHKM 628
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 36/270 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN T+N ++ GF + G + + + + G PD ++YS L+ C + M A
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-----------------GL 345
++ E +K +H ++ YNT++ G + G + +A + ++M GL
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436
Query: 346 ---------SGVESSSV---------TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
+G+ + ++ TF L++GYC+ ++D AI + + M G P+
Sbjct: 437 CKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDV 496
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T L+ LC R++ +D KA + K G P +Y LI+ C++ K+ EA+++
Sbjct: 497 ITYNTLLNGLCKARKLDNVVDTFKAMLEK-GCTPNIITYNILIESFCKDRKVSEAMELFK 555
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
EM +G P + I G G ++ A
Sbjct: 556 EMKTRGLTPDIVTLCTLICGLCSNGELDKA 585
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 113/233 (48%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N ++ G + G + + GC PD ++++ L+ +C++R M +A ++
Sbjct: 424 PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEI 483
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + DV+ YNT++ G C+ ++ + F+ M G + +T+ L+ +C+
Sbjct: 484 LDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCK 543
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
V A+ ++ +M +G P+ T+ LI LC + +A ++ ++ +
Sbjct: 544 DRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTA 603
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ +I CE+ + A K+ +M G P Y ID Y K GN+++A
Sbjct: 604 IFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLA 656
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 178/405 (43%), Gaps = 51/405 (12%)
Query: 68 GLTPTQFSQIAL--GLKNNPHL--ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGP 123
G P +F+ +L GL N+ + A+ F K KHS+ Y T++ LS+ L+
Sbjct: 351 GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF-KHSIILYNTLVKGLSKQGLVLQ 409
Query: 124 ARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDI 183
A +++ + P + + ++V + G CL N I
Sbjct: 410 ALQLMKDMMEHG-CSPDIWTYNLVVNGLCKMG------------CLSDAN--------GI 448
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRV 243
+ +++G + T N LI + + + EI LD+ + GI
Sbjct: 449 LNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEI------LDTMLSHGI---------- 492
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
P+V T+N L+ G + + V D + M GC P+ +Y++L+ FC++R++ EA +
Sbjct: 493 TPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAME 552
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF----REMGLSGVESSSVTFEHLV 359
L++EM+ + + D+V T+I G C GE+ +A E F +E S S+ F ++
Sbjct: 553 LFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFS---YSTAIFNIMI 609
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
N +C +V A +++ M P+ T V+I C + A L + K GL
Sbjct: 610 NAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK-GL 668
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
P+ + ++ LC ++ EA+ + MV G P E+ S F
Sbjct: 669 VPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE-EVNSIF 712
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 114/232 (49%), Gaps = 2/232 (0%)
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
+M + R+G ++ +V+ M CEP SY+ +M + E +A K++ M+D
Sbjct: 81 GIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI 140
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
+ DV + + FC G A M G E ++V++ +++G+ + A
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEA 200
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
++++M ++G P+ T LI LC K V E+ + L ++V+K G+ P ++ I+
Sbjct: 201 YHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQES-EKLFSKVMKRGVCPNLFTFNIFIQ 259
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN-VEMATMLRK 482
GLC +G ++EA ++ +V +G P + Y+ I G+ K VE L K
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHK 311
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 185/388 (47%), Gaps = 44/388 (11%)
Query: 122 GPARDVIRVALRSPEN--DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEK--- 176
G + + + R EN P + + +V G DLL K +E +N++
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK--MEERNVKADVF 229
Query: 177 --------------IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
I+ + + + + ++G+ V T N+L+ + + G + +++
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
V R + PNV TFN L+ F +EG ++ +++ EM G P+
Sbjct: 290 --------------VSR--EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+Y+ LM +C + R+ EA + + M D+V + ++I G+C + + + FR
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
+ G+ +++VT+ LV G+C++G + A ++ +M G P+ T +L+ LCD +
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 403 VFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+ +AL+I L+ + G+ Y +I+G+C+ GK+E+A + + KG +P++
Sbjct: 454 LEKALEIFEDLQKSKMDLGIV----MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFEN 487
Y+ I G K+G++ A +L ++M E+
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEED 537
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 1/224 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ TFN L+ G + EG + + M GC+PD +Y+ ++ C A L
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M ++NV+ DV Y+TII C G + A F+EM G++SS VT+ LV G C+
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG + L+ DM + P T VL+ + ++ EA ++ K + + G+ P
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNII 334
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+Y L+ G C + ++ EA + MV P + +++ I GY
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 79/149 (53%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T++ L+ GF + G + E+++ EM G PD +Y +L+ C+ ++ +A +++
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E+++ ++ +V Y TII G C+ G++ A F + GV+ + +T+ +++G C+
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
G + A ++ M G P T LI
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 97/224 (43%), Gaps = 7/224 (3%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
++ EM R P +S + ++ +++ + H++ N +I FC
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ A ++ G E + TF L+ G G V A+++ + M G +P+
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194
Query: 389 TIEVLIGELCDKRRVFEALDILKA---RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
T ++ +C ALD+L+ R VK +F +Y +I LC +G ++ A+ +
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF----TYSTIIDSLCRDGCIDAAISL 250
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EM KG + S+ Y++ + G K G +L K+M ++
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 78/155 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+ L+ G G EK +++ ++ + + Y+ ++ C+ ++ +A
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ + K V+ +V+ Y +I G C+ G ++ A R+M G + T+ L+ +
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
R GD+ ++ + +M GF + S+I+++I L
Sbjct: 554 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 9/161 (5%)
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK----GFEPEGSTIE 391
A F+EM S S V F + R + + D C++ G T+
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVL----DFCKQLELNGIAHNIYTLN 127
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
++I C + A +L +V+K G P ++ LIKGL EGK+ EA+ + MV
Sbjct: 128 IMINCFCRCCKTCFAYSVL-GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
G +P + Y++ ++G + G+ +A L ++M E V+ +
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 170/375 (45%), Gaps = 64/375 (17%)
Query: 160 VFDLLIKCCLEV------------KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
VFD ++K L + K +I+ C++I R ++ G+ + V + ++ +
Sbjct: 176 VFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLC 235
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
R V ++ +E V ++P +T+N ++ + ++ F VE
Sbjct: 236 RRGEVEKSKKLIKEF----------------SVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV---------- 317
V M + G + +Y++LM + + +M +AEKL++EMR++ +E DV
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339
Query: 318 -------------------------VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
Y +I G C++GEM AE EM GV +
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
V F L++GYCR G VD A ++Y+ M +KGF+ + T + +R EA L
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWL-F 458
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
R+++ G+ + SY LI C+EG +EEA ++ EM KG +P+ Y+ I Y K+G
Sbjct: 459 RMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Query: 473 NVEMATMLRKEMFEN 487
++ A LR M N
Sbjct: 519 KIKEARKLRANMEAN 533
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 120/240 (50%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +T+ AL+ G + G E + EM G ++ L+ +C + + EA +
Sbjct: 362 PSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMI 421
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ M K + DV NTI F + A+++ M GV+ S+V++ +L++ YC+
Sbjct: 422 YDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCK 481
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+V+ A ++ +M KG +P T V+I C + ++ EA L+A + G+ P
Sbjct: 482 EGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARK-LRANMEANGMDPDSY 540
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C ++EA+++ +EM KG + + Y+ I G K G + A L EM
Sbjct: 541 TYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 1/216 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
FN L+ G+ R+G ++ ++ M + G + D ++ + + + F +R EA++ M
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ V+ V+Y +I +C+ G + A+ F EM GV+ +++T+ ++ YC+ G +
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + +M G +P+ T LI C V EA+ + +K GL +Y +
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLK-GLDQNSVTYTVM 580
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
I GL + GK +EA + EM KG+ ++Y+A I
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 89/155 (57%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+ + ++ L+ + +EG E+ + ++VEM+ G +P+ +Y+V++ +C++ +++EA
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEAR 524
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL M ++ D Y ++I G C + A F EMGL G++ +SVT+ +++G
Sbjct: 525 KLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGL 584
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+AG D A +Y++M RKG+ + LIG +
Sbjct: 585 SKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 133/253 (52%), Gaps = 10/253 (3%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ PNV T++AL+ + +E F + E+++ EM G P+ +Y+ ++ FC++ R+ A
Sbjct: 314 KINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAA 373
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
E ++ M K DV +NT+I G+C + E EM +G+ + + T+ L++G
Sbjct: 374 EHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHG 433
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK----- 416
+C GD+++A+ + M G P+ T L+ LCD ++ +AL++ KA
Sbjct: 434 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 493
Query: 417 -----FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
G+ P ++Y LI GL EGK EA ++ EM +G P+ YS+ I+G K+
Sbjct: 494 ASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQ 553
Query: 472 GNVEMATMLRKEM 484
++ AT + M
Sbjct: 554 SRLDEATQMFDSM 566
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 153/313 (48%), Gaps = 28/313 (8%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+++ ++ R ++ V T +ALI + + E+Y E+ GI
Sbjct: 306 LLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEML------PRGI--------- 350
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN T+N+++ GF ++ + E ++ MA GC PD ++++ L+ +C +R+ +
Sbjct: 351 -IPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGT 409
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM + + D YNT+I GFC +G++ A + ++M SGV VT L++G
Sbjct: 410 ELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 469
Query: 363 CRAGDVDSAILVYNDMCR-----------KGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
C G + A+ ++ M + G EP+ T +LI L ++ + EA ++ K
Sbjct: 470 CDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYK 529
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ G+ P +Y +I GLC++ +++EA ++ M K F P + ++ + GY K
Sbjct: 530 -EMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKA 588
Query: 472 GNVEMATMLRKEM 484
G V+ L EM
Sbjct: 589 GRVDDGLELFCEM 601
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 166/376 (44%), Gaps = 40/376 (10%)
Query: 144 FEVLVKTYRECGSAPFVFD-------------------LLIKCCLEVKNIEKIETCVDIV 184
F +L+K + C PF LL C+E +++ +D+
Sbjct: 115 FNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVE----DRVSEALDLF 170
Query: 185 RMLMSRGLSVKVSTCNALIWE-------VSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
+ + + N L E + V G + + +G D IG V
Sbjct: 171 HQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTV 230
Query: 238 ---------KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
+ + ++PNV ++A++ G +++G +++ EM G PD ++Y+ +
Sbjct: 231 SALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCM 290
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ FC R EA++L +EM ++ + +VV Y+ +I + + + AEE + EM G+
Sbjct: 291 IDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGI 350
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+++T+ +++G+C+ +D+A ++ M KG P+ T LI C +R+ + +
Sbjct: 351 IPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTE 410
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+L + + GL +Y LI G C G + AL + +M+ G P + + +DG
Sbjct: 411 LLH-EMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 469
Query: 469 MKEGNVEMATMLRKEM 484
G ++ A + K M
Sbjct: 470 CDNGKLKDALEMFKAM 485
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 128/240 (53%), Gaps = 9/240 (3%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATA 231
+ + +D+ + ++S G+ + TCN L+ + + E+++ + +D DA+
Sbjct: 437 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASR 496
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
V P+V T+N L+ G EG F + E+++ EM G P+ +YS ++
Sbjct: 497 PFNG-------VEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMING 549
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C++ R+ EA ++++ M K+ DVV +NT++ G+C+ G + E F EMG G+ +
Sbjct: 550 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVAD 609
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
++T+ L++G+ + G+++ A+ ++ +M G P+ TI ++ L K + A+ +L+
Sbjct: 610 AITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLE 669
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 116/248 (46%), Gaps = 4/248 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P+V FN LM R + V ++ +M R D YS+++L+ FC ++ A
Sbjct: 72 RPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFA 131
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ ++ + DVV ++T++ G C ++ A + F +M V VTF L+NG
Sbjct: 132 LSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPNV----VTFTTLMNG 187
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
CR G V A+ + + M G +P T ++ +C AL++L+ + P
Sbjct: 188 LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKP 247
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y +I GL ++G+ +A + EM KG P L Y+ IDG+ G A L
Sbjct: 248 NVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLL 307
Query: 482 KEMFENQV 489
+EM E ++
Sbjct: 308 QEMLERKI 315
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 6/238 (2%)
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L GF+ E D++ +M R P ++ LM V R L+++M K
Sbjct: 48 LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ DV ++N +I FC ++ A F ++ G + VTF L++G C V A+
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+++ MCR P T L+ LC + RV EA+ +L R+V+ GL P + +Y ++ G
Sbjct: 168 DLFHQMCR----PNVVTFTTLMNGLCREGRVVEAVALLD-RMVEDGLQPNQITYGTIVDG 222
Query: 433 LCEEGKMEEALKVQAEMVGKG-FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+C+ G AL + +M +P++ IYSA IDG K+G A L EM E +
Sbjct: 223 MCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGI 280
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 31/266 (11%)
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV------------------FGLDS 227
++ ++G S V T N LI K + G E+ E+ F L
Sbjct: 379 VMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVG 438
Query: 228 DATAGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL---------- 276
D A + + + V P++ T N L+ G G + +++ M +
Sbjct: 439 DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPF 498
Query: 277 -GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G EPD +Y++L++ E + EAE+L++EM + + + + Y+++I G C+ +
Sbjct: 499 NGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDE 558
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A + F MG VTF LV+GYC+AG VD + ++ +M R+G + T LI
Sbjct: 559 ATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIH 618
Query: 396 ELCDKRRVFEALDILKARVVKFGLFP 421
+ ALDI + ++ G++P
Sbjct: 619 GFRKVGNINGALDIFQ-EMISSGVYP 643
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 48/102 (47%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN L+ G+ + G + +++ EM R G D +Y L+ F + + A +
Sbjct: 573 PDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDI 632
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++EM V D + +++ E+ RA ++ +S
Sbjct: 633 FQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQMS 674
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 124/246 (50%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +T+ L+ G+ +GA + D+ M + G + + +++L+ + + + +A
Sbjct: 258 PDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTA 317
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EMR K +VV Y T+I C+ G + A F +M G+ +TF L++G C
Sbjct: 318 FIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCT 377
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ + +M +G P + ++ LC + RV EA D +++ G+ P
Sbjct: 378 IGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFD-QIIHVGVKPDVV 436
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
SY LI G C +GKM+E++K+ MV G P YSA ++GY K G V+ A L +EM
Sbjct: 437 SYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREM 496
Query: 485 FENQVR 490
F V+
Sbjct: 497 FSKDVK 502
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 122/236 (51%), Gaps = 1/236 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ TF +L+ G G ++KVE + EM G P+ + +M C+E R+ EA
Sbjct: 363 PDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDF 422
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++++ V+ DVV+Y +I G+C G+M + + M G+ +VT+ L+NGYC+
Sbjct: 423 FDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCK 482
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G VD A+ +Y +M K +P T +++ L RV A + ++V G+
Sbjct: 483 NGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAARE-FYMKIVDSGIQLGIN 541
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y ++ GLCE ++EAL++ + K F+ + ++ I G +K G + A L
Sbjct: 542 TYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSL 597
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 17/246 (6%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEM---------ARL-------GCEPDCYSYSVL 288
PN+ T+N+++ G + A +K E V +M RL G +PD +YS+L
Sbjct: 172 PNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLL 231
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ +C+ R EA +++ M + D Y T++ G+ G + + M G+
Sbjct: 232 IDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGI 291
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
F L+ Y + +D A+ + +M +KGF P T +I LC RV +A+
Sbjct: 292 PLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVS 351
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+++V GL P ++ LI GLC G+ ++ K+ EM+ +G P+ + +D
Sbjct: 352 HF-SQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSL 410
Query: 469 MKEGNV 474
KEG V
Sbjct: 411 CKEGRV 416
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 120/237 (50%), Gaps = 1/237 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V+P+V ++ L+ G+ +G ++ + M +G PD +YS L+ +C+ R+ +
Sbjct: 429 VGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDD 488
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L+ EM K+V+ + + YN I+ G G + A EF+ ++ SG++ T+ ++
Sbjct: 489 ALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLG 548
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C VD A+ ++ + K F+ E T ++I L R+ +A + A ++ GL
Sbjct: 549 GLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSA-ILPSGLV 607
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P Y +I+ EEG +EE+ ++ M G + +A + +++G+V A
Sbjct: 608 PDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRA 664
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 118/270 (43%), Gaps = 44/270 (16%)
Query: 246 NVHTFNALMV--------GFYREGAFEKVEDVWVEMARLGCE---PDCYSYSVLMAVFCE 294
+VH FN ++ R GA V ++ MA++G D ++ +L+ FC
Sbjct: 48 SVHAFNRVLTVVAHGDSSSSQRHGAALAVS-LFNTMAQVGVNKLATDACTFGILIRCFCN 106
Query: 295 --------ERRMREAEKLWEEMRDK--NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
E R + M D N +V++YN +I G + GE+ +A F EM
Sbjct: 107 VGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEML 166
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G + VT+ +++G C+A +D A E ++ ++ DK ++
Sbjct: 167 GQGFPPNIVTYNSVIDGLCKAQAMDKA-------------------EAVLQQMFDKGQLE 207
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
EA+ +LK ++ GL P +Y LI C+ G+ EA + MV +G P Y
Sbjct: 208 EAVRLLK-KMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTL 266
Query: 465 IDGYMKEGN-VEMATMLRKEMFENQVRQED 493
+ GY +G V+M +L M ++ + ED
Sbjct: 267 LHGYATKGALVDMHDLL-ALMIQDGIPLED 295
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 104/261 (39%), Gaps = 51/261 (19%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K++ + ++ ++S GL T +AL+ + V +YRE+F D
Sbjct: 450 KMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKD--------- 500
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
V+PN T+N ++ G + G + ++++ G + +Y++++ CE
Sbjct: 501 -------VKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCEN 553
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA------------------- 336
+ EA ++++ +R K + +V +N +I G ++G + A
Sbjct: 554 SFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIY 613
Query: 337 ----------------EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
+E F M +G ++S T +V GDV A +
Sbjct: 614 GLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDE 673
Query: 381 KGFEPEGSTIEVLIGELCDKR 401
K + E ST +LI + +++
Sbjct: 674 KEYSVEASTAVLLISIVSERK 694
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +T+N L+ G G + V +M R GC PD +Y++L+ C+ ++A KL
Sbjct: 150 PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKL 209
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EMRDK D+V YN ++ G C+ G + A EF + + G E ++V++ ++ G C
Sbjct: 210 LDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCT 269
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A + A + +M RKG P T +LI LC + V A++IL ++ K+G P
Sbjct: 270 AERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILD-QIPKYGCTPNSL 328
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
SY ++ C++ KM+ A+ MV G P + Y+ + + G V+ A L ++
Sbjct: 329 SYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 388
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 119/245 (48%), Gaps = 1/245 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV TFN L+ R G E ++ ++ + GC P+ SY+ ++ FC++++M A
Sbjct: 290 PNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF 349
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M D+V+YNT++ C GE+ A E ++ G +++ +++G +
Sbjct: 350 VELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTK 409
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG + A+ + N+M KG +P+ T + LC + R+ EA+ +V G+ P
Sbjct: 410 AGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAF-CKVQDMGIRPNTV 468
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y ++ GLC+ A+ + MV G P+ Y+ I+G EG V+ A + E+
Sbjct: 469 LYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAEL 528
Query: 485 FENQV 489
V
Sbjct: 529 CSRGV 533
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 122/278 (43%), Gaps = 36/278 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N ++ G +EG + + + GCEP+ SY++++ C R +AEKL
Sbjct: 220 PDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKL 279
Query: 305 WEEMRDKNVEHDVV-----------------------------------AYNTIIGGFCE 329
EM K +VV +YN I+ FC+
Sbjct: 280 MAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCK 339
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
+M RA F M SG V++ L+ CR G+VD+A+ + + + KG P +
Sbjct: 340 QKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLIS 399
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
+I L + EAL++L V K GL P +Y + GLC EG++EEA+K ++
Sbjct: 400 YNTVIDGLTKAGKTEEALELLNEMVTK-GLQPDIITYSTISSGLCREGRIEEAIKAFCKV 458
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
G P+ +Y+A + G K A L M N
Sbjct: 459 QDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSN 496
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
+K++ + V +++S G + + N L+ + RG V + E+ ++ D T
Sbjct: 341 KKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK--DKGCT---- 394
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
P + ++N ++ G + G E+ ++ EM G +PD +YS + + C
Sbjct: 395 ----------PVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCR 444
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E R+ EA K + +++D + + V YN I+ G C+ A + F M +G + T
Sbjct: 445 EGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNEST 504
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+ L+ G G V A + ++C +G
Sbjct: 505 YTILIEGLAYEGLVKEAREMMAELCSRG 532
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 58/148 (39%), Gaps = 29/148 (19%)
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGS-TIEVLIGELCDKRRVFEA---------------- 406
R GD++ AI + M G EP + LI +LC R EA
Sbjct: 68 RRGDLEEAIRLVESM--AGLEPSAAGPCAALIKKLCASGRTAEARRVLASCEPDVMSYNA 125
Query: 407 ----------LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LD + V + P +Y LI+GLC G+ + AL V +M+ +G P
Sbjct: 126 MVAGYCVTGQLDNARRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVP 185
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ Y+ ++ K + A L EM
Sbjct: 186 DVVTYTILLEATCKRSGYKQAVKLLDEM 213
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 123/241 (51%), Gaps = 1/241 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+V T+N ++ Y++ D EM G PD +Y+ ++ C ++ EA +
Sbjct: 300 KPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIR 359
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+++M K + DVVAYNTII C+ + A EF EM G+ ++VT+ +++G+C
Sbjct: 360 LFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFC 419
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G +D A ++ +M + P T +L+ LC + V EA + + K G+ P
Sbjct: 420 NLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEK-GVEPNI 478
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ G C KM EA KV MVGKG P L Y+ I+GY ++ A L +
Sbjct: 479 YTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQ 538
Query: 484 M 484
M
Sbjct: 539 M 539
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 203/469 (43%), Gaps = 80/469 (17%)
Query: 64 LCRSGLTPTQFSQIAL--GLKN--NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRAR 119
+ RSG P S L GL N N ++A+ F + CK ++ +Y TII L + R
Sbjct: 189 MVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNG-CKPNVVTYNTIIDSLCKDR 247
Query: 120 LIGPARDVIR--VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKI 177
L+ A D + V P P + +V CCL ++
Sbjct: 248 LVNDAMDFLSEMVGRGIP---PDAITYNSIVHGL---------------CCLG-----QL 284
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
+ + + G V T N +I + + + L +DA + + V
Sbjct: 285 NEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDR--------------LVNDAADFLSEMV 330
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
+ + P+V T+ ++ G G + ++ +M + GC+PD +Y+ ++ C++R
Sbjct: 331 DQ--GIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRL 388
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ +A + EM D+ + + V Y+TI+ GFC +G++ A + F+EM V +++TF
Sbjct: 389 VNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSI 448
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC------DKRRVFEA----- 406
LV+G C+ G V A V+ M KG EP T L+ C + R+VFE
Sbjct: 449 LVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKG 508
Query: 407 --------------------LDILKARVVKFG---LFPTEKSYMFLIKGLCEEGKMEEAL 443
+D KA + + L P +Y ++KGLC G++ +A
Sbjct: 509 CAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQ 568
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
++ +M G P+L YS ++G K G+++ A L K M E ++ +
Sbjct: 569 ELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPD 617
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 115/203 (56%), Gaps = 1/203 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN++T+NALM G+ + V+ M GC PD +SY++L+ +C RRM +A+
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAK 533
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +M K + + V YNTI+ G C +G + A+E F++M SG+ + +T+ L+NG
Sbjct: 534 ALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGL 593
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G +D A+ ++ M K EP+ +LI + ++ E L +++ G+ P
Sbjct: 594 CKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKL-EVAKGLFSKLSADGIQPP 652
Query: 423 EKSYMFLIKGLCEEGKMEEALKV 445
++Y +IKGL +EG +EA ++
Sbjct: 653 GRTYNVMIKGLLKEGLSDEAYEL 675
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 125/244 (51%), Gaps = 1/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+V TF L+ G EG + +++ EM R G EPD SY+ L+ C A
Sbjct: 159 IQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAV 218
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++++M + +VV YNTII C+ + A +F EM G+ ++T+ +V+G
Sbjct: 219 HVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGL 278
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G ++ A ++ M + G +P+ T ++I L R V +A D L + +V G+ P
Sbjct: 279 CCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFL-SEMVDQGIPPD 337
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y ++ GLC G++ EA+++ +M KG +P + Y+ ID K+ V A
Sbjct: 338 VVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLS 397
Query: 483 EMFE 486
EM +
Sbjct: 398 EMVD 401
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 1/231 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
V PN TF+ L+ G +EG + V+ M G EP+ Y+Y+ LM +C +M EA
Sbjct: 438 NVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEA 497
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K++E M K D+ +YN +I G+C M +A+ +M + + ++VT+ ++ G
Sbjct: 498 RKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKG 557
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C G + A ++ MC G P T +L+ LC + EAL + K+ K L P
Sbjct: 558 LCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEK-KLEP 616
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
Y LI+G+ GK+E A + +++ G +P Y+ I G +KEG
Sbjct: 617 DIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEG 667
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 1/246 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RP++ F + + + V + +M G YS ++L+ C + A
Sbjct: 90 RPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVS 149
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+W +M ++ DV+ + T+I G C G++ A E + EM SG E +++ L+NG C
Sbjct: 150 VWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLC 209
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+G+ + A+ V+ M + G +P T +I LC R V +A+D L + +V G+ P
Sbjct: 210 NSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFL-SEMVGRGIPPDA 268
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y ++ GLC G++ EA ++ M G +P + Y+ ID K+ V A E
Sbjct: 269 ITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSE 328
Query: 484 MFENQV 489
M + +
Sbjct: 329 MVDQGI 334
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 121/242 (50%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V V++ N L+ R + VW +M +LG +PD +++ L+ C E +++ A
Sbjct: 124 VTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAV 183
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ EM E DV++YNT+I G C G A F++M +G + + VT+ +++
Sbjct: 184 ELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSL 243
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ V+ A+ ++M +G P+ T ++ LC ++ EA + K R+ + G P
Sbjct: 244 CKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFK-RMEQNGCKPD 302
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I L ++ + +A +EMV +G P + Y+ + G G + A L K
Sbjct: 303 VVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFK 362
Query: 483 EM 484
+M
Sbjct: 363 KM 364
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 1/223 (0%)
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+ MAR+ P + + + ++ L +M V H V + N +I C
Sbjct: 81 FYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCR 140
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
+ + A + +M G++ +TF L+NG C G + A+ +YN+M R G EP+ +
Sbjct: 141 LNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVIS 200
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
LI LC+ A+ + K ++ + G P +Y +I LC++ + +A+ +EM
Sbjct: 201 YNTLINGLCNSGNTNMAVHVFK-KMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEM 259
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
VG+G P Y++ + G G + AT L K M +N + +
Sbjct: 260 VGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPD 302
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 134/328 (40%), Gaps = 56/328 (17%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR--VALRSPEN-------- 137
A+R F + K CK + +Y TII L + RL+ A + + V P N
Sbjct: 357 AIRLFKKMEQKG-CKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTIL 415
Query: 138 ---------DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLM 188
D +LF+ +V R F +L+ + + + + +
Sbjct: 416 HGFCNLGQLDEATQLFKEMVG--RNVMPNTLTFSILVDGLCQEGMVSEARW---VFETMT 470
Query: 189 SRGLSVKVSTCNAL---------------IWEVSRGKG----------VISGYEIYREVF 223
+G+ + T NAL ++E+ GKG +I+GY R
Sbjct: 471 EKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRR-- 528
Query: 224 GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
+D VK++ PN T+N +M G G ++++ +M G P
Sbjct: 529 -MDKAKALLTQMSVKKLT---PNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLM 584
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+YS+L+ C+ + EA KL++ M++K +E D++ Y +I G G++ A+ F ++
Sbjct: 585 TYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKL 644
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSA 371
G++ T+ ++ G + G D A
Sbjct: 645 SADGIQPPGRTYNVMIKGLLKEGLSDEA 672
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 125/242 (51%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P V T+ L+ G G KVE V+ E+ R D Y YS ++ +C +R A
Sbjct: 199 VEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRAS 258
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++++E +E + Y +I GFC+IG++ AE +M L GV + + F +++GY
Sbjct: 259 EVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGY 318
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G VD A+ + M R G + + T L LC R+ +A +L + + G+
Sbjct: 319 CRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHI-MTENGVESN 377
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY LI +EG M EA ++ +M GKG PS+ Y+ IDGY+K G++ A +K
Sbjct: 378 YVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKK 437
Query: 483 EM 484
EM
Sbjct: 438 EM 439
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 1/216 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
FN ++ G+ R G +K ++ M R+G + D Y+Y+ L C RM +A+KL M
Sbjct: 311 FNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMT 370
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ VE + V+Y T+I + G+M A FR+M G S VT+ +++GY ++G +
Sbjct: 371 ENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIR 430
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A +M +KG P+ T L+ C +V AL + + + + G P +Y L
Sbjct: 431 EAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFE-EMKQRGAKPNVVAYTAL 489
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
I GL +EG+ EEA + M+ G P +YS +
Sbjct: 490 ISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 162/360 (45%), Gaps = 25/360 (6%)
Query: 136 ENDPKLKLFEVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLS 193
+ND ++ EVL K G P V + +L+ +I K+E+ D ++ + ++
Sbjct: 182 KNDARVA--EVL-KEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIK---RKNVA 235
Query: 194 VKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNAL 253
V +A+I R V E++ E G + PN T+ AL
Sbjct: 236 GDVYFYSAVINAYCRAGNVRRASEVFDECVGNG----------------IEPNERTYGAL 279
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ GF + G E E + +M G + ++ ++ +C + +A ++ M +
Sbjct: 280 INGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGI 339
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
+ DV YNT+ G C + M A++ M +GVES+ V++ L++ + + GD+ A
Sbjct: 340 QLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARR 399
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
++ DM KG P T V+I + EA + K + K GL P +Y L+ G
Sbjct: 400 LFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREA-ERFKKEMEKKGLVPDVYTYAALVHGH 458
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
C GK++ AL++ EM +G +P++ Y+A I G KEG E A M + +D
Sbjct: 459 CVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDD 518
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 10/211 (4%)
Query: 280 PDC---YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
P C S SV++ FC+ RM +A +L +EM V+ + YN ++ + AR
Sbjct: 128 PGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARV 187
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
E +EM GVE + T+ LV+G AGD+ V++++ RK + +I
Sbjct: 188 AEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINA 247
Query: 397 LC---DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
C + RR E D V G+ P E++Y LI G C+ G++E A + +M +G
Sbjct: 248 YCRAGNVRRASEVFD----ECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRG 303
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ I++ IDGY + G V+ A ++ M
Sbjct: 304 VGHNQIIFNTMIDGYCRHGMVDKALEIKAVM 334
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 155/326 (47%), Gaps = 20/326 (6%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATA------- 231
V ++ + ++G ++ CN ++ + V + R++ FG ++D +
Sbjct: 166 VRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225
Query: 232 --------GIGKDVKRVVRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
+ + + +VRV PN+ TFN L+ R G FE+V +V +M+ GC PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
Y+ ++ C+E + A ++ M ++ +VV YNT++ G C AEE
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM VTF LV+ +C+ G VD I + M G P+ T +I C +
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ EA+ +LK+ + G P SY ++KGLC G+ +A ++ ++M+ +G P+ +
Sbjct: 406 LIDEAVMLLKS-MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTF 464
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFEN 487
+ I+ K+G VE A L K+M N
Sbjct: 465 NTLINFLCKKGLVEQAIELLKQMLVN 490
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV +N ++ G +++ E++ EM + C D ++++L+ FC+ +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L E+M DV+ Y T+I GFC+ G + A + M G + ++V++ ++ G
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C AG A + + M ++G P T LI LC K V +A+++LK +V G P
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPD 495
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY +I GL + GK EEAL++ MV KG P+ IYS+ +EG V +
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555
Query: 483 EMFENQVRQE 492
+ + +R +
Sbjct: 556 NIKDTTIRSD 565
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 7/256 (2%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V PN +TF ++ G G +V EM+ GC P Y V++ C R
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ ++ E M K D N ++ CE G + A R++ G E+ V++ ++
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 361 GYC---RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
G C R GDV+ + ++M R P T LIG LC + +FE + + A++ +
Sbjct: 225 GLCMAKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLC-RNGLFERVHEVLAQMSEH 280
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P + Y +I G+C+EG +E A ++ M G +P++ Y+ + G + A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340
Query: 478 TMLRKEMFENQVRQED 493
L EMF+ +D
Sbjct: 341 EELLSEMFQKDCPLDD 356
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 146/330 (44%), Gaps = 26/330 (7%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD---SDATAGI 233
+E +I+ + S GL V N ++ + + E+ E+F D D T I
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 234 GKD-------VKRVVRV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
D V RV+ + P+V T+ ++ GF +EG ++ + M+ G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C+P+ SY++++ C R +AE+L +M + + V +NT+I C+ G + +A
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG---STIEVLI 394
E ++M ++G +++ +++G +AG + A+ + N M KG P S+I +
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+V + D +K ++ Y +I LC+ + + A+ A MV G
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIR----SDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P+ Y+ I G EG + A L E+
Sbjct: 598 MPNESTYTMLIKGLASEGLAKEAQELLSEL 627
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 103/210 (49%), Gaps = 1/210 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN ++ ++ G G + E++ +M + GC P+ +++ L+ C++ + +A +
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L ++M D+++Y+T+I G + G+ A E M G+ +++ + +
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G V+ I +++++ + +I LC + A+D A +V G P E
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFF-AYMVSNGCMPNE 601
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+Y LIKGL EG +EA ++ +E+ +G
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 86/235 (36%), Gaps = 68/235 (28%)
Query: 317 VVAYNTIIGGFCEIGE--------------------------------MARAEEFFREMG 344
VVAYN ++ G+C G+ +A A E EM
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G + ++ CR+G +++ V M KG + +++ +C++ V
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKG-------------------------------- 432
EA+ +L+ ++ FG SY ++KG
Sbjct: 199 EAVGLLR-KLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257
Query: 433 ---LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LC G E +V A+M G P + +Y+ IDG KEG++E+A + M
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 134/246 (54%), Gaps = 1/246 (0%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
R+ + PN++T+N L+ + R G FE+ ++ EM G + SY+ L+A C R+M
Sbjct: 100 RIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKM 159
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
++A +L E MR + + VV +N ++ G+ + G+M+ A F +M ++G + S+VT+ L
Sbjct: 160 KDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNAL 219
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+ G+CRA D+ A ++DM +G P T +LI + + +A ++ A + K G
Sbjct: 220 IAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMF-AGMEKAG 278
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
L ++Y L+ LC EG M++A K+ + KG + IY I GY +EG+ A
Sbjct: 279 LEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAM 338
Query: 479 MLRKEM 484
L EM
Sbjct: 339 KLIMEM 344
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 142/308 (46%), Gaps = 28/308 (9%)
Query: 187 LMSRG-----LSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
L++RG ++ V+ C AL+ R V ++ DV +
Sbjct: 24 LLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVF----------------DVMPRL 67
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ PN TF AL+ G++ G EK ++ +M G EP+ Y+Y++L+ +C A
Sbjct: 68 GLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERA 127
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L+EEM K + +VV+YNT+I G C +M A + M G+ S VTF LV+G
Sbjct: 128 RLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDG 187
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR---RVFEALDILKARVVKFG 418
Y +AG + +A+ N M G++P T LI C R R A +K R G
Sbjct: 188 YGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKER----G 243
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
L PT+ +Y LI E M++A ++ A M G E + Y + EGN++ A
Sbjct: 244 LAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDAR 303
Query: 479 MLRKEMFE 486
L + + E
Sbjct: 304 KLFQSIGE 311
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 133/285 (46%), Gaps = 17/285 (5%)
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVH 248
++G++ V + N LI + R YR++ DAT + ++ R +RP+V
Sbjct: 136 AKGITRNVVSYNTLIAGLCR----------YRKM----KDATQLL--ELMRREGIRPSVV 179
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
TFN L+ G+ + G +M G +P +Y+ L+A FC R M A + + +M
Sbjct: 180 TFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDM 239
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+++ + V Y +I F +M +A E F M +G+E T+ LV+ C G++
Sbjct: 240 KERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNM 299
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A ++ + KG + ++LI + ++A+ ++ + K G P SY
Sbjct: 300 KDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLI-MEMRKKGFVPNSASYGL 358
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
I+ LC +GK EA + +MV G + S + ++ ++G+
Sbjct: 359 TIRILCNDGKCSEAEALIDDMVRAGVQTSESVRQVLLNAKARQGS 403
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 179/375 (47%), Gaps = 37/375 (9%)
Query: 147 LVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI- 203
L K E G P V +++LI + K + + +DI + ++ +S + T N+LI
Sbjct: 222 LFKKMEEAGCQPNVVTYNILIDSLCKDKLVNE---ALDIFSYMKAKRISPDIFTYNSLIQ 278
Query: 204 -------W-EVSRGKGVISGYEIYREVFGLDS--DATAGIGK--DVKRVVR------VRP 245
W E S ++ I +F + DA GK + + V + V P
Sbjct: 279 GLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEP 338
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V T+++LM G+ + ++ M GC+PD +SY++L+ +C+ +R+ EA++L+
Sbjct: 339 DVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLF 398
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM + + D V YNT+I G C++G + A++ F+ M +G T+ L++G+C+
Sbjct: 399 NEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKE 458
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC------DKRRVFEALDILKARVVKFGL 419
G + A ++ M +P+ + +LI +C D R++F L + GL
Sbjct: 459 GYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQ-------GL 511
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P + Y +I LC+EG ++EAL+ M G G P Y+ I G+++ + A
Sbjct: 512 LPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQ 571
Query: 480 LRKEMFENQVRQEDG 494
L EM + E G
Sbjct: 572 LIGEMRDRGFVAEAG 586
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 127/252 (50%), Gaps = 8/252 (3%)
Query: 245 PNVHTFNALMVGFYREGAFE-KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
P + F L+ + G + V + +M G PD Y+ S+L+ F +R+ A
Sbjct: 92 PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFS 151
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ +M ++ D V +NT+I G C++G+ A+A EFF + SG + + T+ ++NG C
Sbjct: 152 VFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLC 211
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVKFGLF 420
+ G+ +A ++ M G +P T +LI LC + V EALDI +KA+ + +F
Sbjct: 212 KIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIF 271
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y LI+GLC + +EA + EM P++ ++ +D KEG V A +
Sbjct: 272 ----TYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGV 327
Query: 481 RKEMFENQVRQE 492
K M E V +
Sbjct: 328 FKTMTEMGVEPD 339
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 150/343 (43%), Gaps = 22/343 (6%)
Query: 147 LVKTYRECGSAPFVFDL--LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
L K G +P ++ L LI C ++++++ + ++ GL T N LI
Sbjct: 117 LSKQMELAGLSPDIYTLSILIDC---FSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLIN 173
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ + E + D +A+ +P V+T+ ++ G + G
Sbjct: 174 GLCKVGKFAQAVEFFD-----DFEASG-----------CQPTVYTYTTIINGLCKIGETT 217
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
++ +M GC+P+ +Y++L+ C+++ + EA ++ M+ K + D+ YN++I
Sbjct: 218 AAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLI 277
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G C A EM + + TF LV+ C+ G V A V+ M G E
Sbjct: 278 QGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVE 337
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P+ T L+ + + EA + A + K G P SY LIKG C+ +++EA +
Sbjct: 338 PDVVTYSSLMYGYSLRMEIVEARKLFDAMITK-GCKPDAFSYNILIKGYCKAKRIDEAKQ 396
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ EM+ +G P Y+ I G + G + A L K M N
Sbjct: 397 LFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSN 439
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 159/359 (44%), Gaps = 24/359 (6%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP 158
SLCK L + A I +A+ I P ++ N + K L+ P
Sbjct: 244 SLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMP 303
Query: 159 --FVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISG 215
F F++L+ C E K+ + + + G+ V T ++L++ S ++
Sbjct: 304 NIFTFNVLVDAICKE----GKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEA 359
Query: 216 YEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
+++ D+ T G +P+ ++N L+ G+ + ++ + ++ EM
Sbjct: 360 RKLF------DAMITKG----------CKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIH 403
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G PD +Y+ L+ C+ R+REA+ L++ M D+ Y+ ++ GFC+ G + +
Sbjct: 404 QGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGK 463
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A FR M + ++ + L++ C+ G++ A +++++ +G P +I
Sbjct: 464 AFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIIN 523
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
LC + + EAL+ + + G P E SY +I+G + A ++ EM +GF
Sbjct: 524 NLCKEGLLDEALEAFR-NMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGF 581
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 112/248 (45%), Gaps = 21/248 (8%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
KLF+ ++ + C F +++LIK + K I++ + + ++ +GL+ N
Sbjct: 361 KLFDAMIT--KGCKPDAFSYNILIKGYCKAKRIDEAK---QLFNEMIHQGLTPDNVNYNT 415
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
LI + + + ++++ + S+ P++ T++ L+ GF +EG
Sbjct: 416 LIHGLCQLGRLREAQDLFKN---MHSNGNL-------------PDLFTYSMLLDGFCKEG 459
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
K ++ M +PD Y++L+ C+ +++A KL+ E+ + + +V Y
Sbjct: 460 YLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYT 519
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
TII C+ G + A E FR M G ++ ++ G+ + D A + +M +
Sbjct: 520 TIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDR 579
Query: 382 GFEPEGST 389
GF E T
Sbjct: 580 GFVAEAGT 587
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 157/304 (51%), Gaps = 17/304 (5%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
+G+ V T ++LI + G ++ RE+ G + + P+V T
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN----------------IIPDVVT 317
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F+AL+ F +EG + ++++ EM G PD +Y+ L+ FC+E + EA ++++ M
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K E D+V Y+ +I +C+ + FRE+ G+ +++T+ LV G+C++G ++
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+A ++ +M +G P T +L+ LCD + +AL+I + ++ K + Y +
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE-KMQKSRMTLGIGIYNII 496
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I G+C K+++A + + KG +P + Y+ I G K+G++ A ML ++M E+
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 490 RQED 493
+D
Sbjct: 557 TPDD 560
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 127/245 (51%), Gaps = 5/245 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ +V ++ ++ ++G+F+ ++ EM G + D +YS L+ C + + +
Sbjct: 240 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 299
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+ EM +N+ DVV ++ +I F + G++ A+E + EM G+ ++T+ L++G
Sbjct: 300 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C+ + A +++ M KG EP+ T +LI C +RV + + + + + GL P
Sbjct: 360 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR-EISSKGLIP 418
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y L+ G C+ GK+ A ++ EMV +G PS+ Y +DG G + A
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL--- 475
Query: 482 KEMFE 486
E+FE
Sbjct: 476 -EIFE 479
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 123/247 (49%), Gaps = 5/247 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ TF+ L+ GF EG + + M + PD + S L+ C + R+ EA L
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + + D V Y ++ C+ G A A + FR+M +++S V + +++ C+
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G D A+ ++N+M KG + + T LIG LC+ + + +L+ + + + P
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVV 316
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI +EGK+ EA ++ EM+ +G P Y++ IDG+ KE + A +M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN----QM 372
Query: 485 FENQVRQ 491
F+ V +
Sbjct: 373 FDLMVSK 379
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 124/258 (48%), Gaps = 3/258 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
S+A A + + V+ ++ RP++ T + L+ G +G + + M G +PD +Y
Sbjct: 157 SEAVALVDRMVE--MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ C+ A L+ +M ++N++ VV Y+ +I C+ G A F EM +
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+++ VT+ L+ G C G D + +M + P+ T LI + ++ EA
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
++ + + G+ P +Y LI G C+E + EA ++ MV KG EP + YS I+
Sbjct: 335 KELYNEMITR-GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 467 GYMKEGNVEMATMLRKEM 484
Y K V+ L +E+
Sbjct: 394 SYCKAKRVDDGMRLFREI 411
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 117/278 (42%), Gaps = 34/278 (12%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P FN L R ++ V M G E D Y+ ++++ +C ++++ A
Sbjct: 65 RPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFA 124
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ E D + ++T++ GFC G ++ A M VT L+NG
Sbjct: 125 FSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLING 184
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI--------LKAR 413
C G V A+++ + M GF+P+ T ++ LC ALD+ +KA
Sbjct: 185 LCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 244
Query: 414 VVKF--------------------------GLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
VV++ G+ +Y LI GLC +GK ++ K+
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
EM+G+ P + +SA ID ++KEG + A L EM
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 51/260 (19%)
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
+++S+G + T + LI + K V G ++RE+ ++ G+ P
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI------SSKGL----------IP 418
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+N L++GF + G ++++ EM G P +Y +L+ C+ + +A +++
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 306 EEMR-----------------------------------DKNVEHDVVAYNTIIGGFCEI 330
E+M+ DK V+ DVV YN +IGG C+
Sbjct: 479 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G ++ A+ FR+M G T+ L+ + + S++ + +M GF + STI
Sbjct: 539 GSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 598
Query: 391 EVLIGELCDKRRVFEALDIL 410
+++I L D+R LD+L
Sbjct: 599 KMVIDMLSDRRLDKSFLDML 618
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 1/194 (0%)
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
++ +A L+E M + +N + + F + M L+G+E T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
++N YCR + A V + G+EP+ T L+ C + RV EA+ ++ R+V+
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD-RMVE 168
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
P + LI GLC +G++ EAL + MV GF+P Y ++ K GN +
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 477 ATMLRKEMFENQVR 490
A L ++M E ++
Sbjct: 229 ALDLFRKMEERNIK 242
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 149/328 (45%), Gaps = 20/328 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
F ++ +I C KN E ++ IV ++ RG +T N LI +S + ++
Sbjct: 338 FTYNTVINCL--SKNGE-LDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDL 394
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
RE+ V + P+V+TFN L+ + G ++ EM GC
Sbjct: 395 AREL----------------TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGC 438
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
PD +Y++L+ C ++ A L EM V YNTII C+ + AEE
Sbjct: 439 TPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEE 498
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F +M G+ S+VTF L++G C+A +D A + M ++G +P T ++ C
Sbjct: 499 VFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYC 558
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ + +A DIL+ G +Y LI GLC+ G+ + ALK+ M KG P+
Sbjct: 559 KQGNIKKAADILETMTAN-GFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTP 617
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ Y+ I + N+ A L +EM E
Sbjct: 618 KAYNPVIQSLFRRNNLRDALNLFREMTE 645
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 147/328 (44%), Gaps = 20/328 (6%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
VF+ L+ +E ++ +E+ + + RG+ V T N LI K + +++
Sbjct: 164 VFNHLLNVLVEGSKLKLLES---VYNEMTGRGIQPDVVTLNTLI------KALCRAHQVR 214
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
V L+ ++ G+ P+ TF LM GF EG+ E V +M GC
Sbjct: 215 TAVLMLEEMSSHGVA----------PDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCS 264
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P + +VL+ +C+ R+ +A ++ E D V YNT + G C+ G ++ A +
Sbjct: 265 PTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKV 324
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
M G + T+ ++N + G++D A + N M +G P+ +T LI L
Sbjct: 325 MDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSS 384
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+ R+ EALD+ + VK GL P ++ LI LC+ G +++ EM G P
Sbjct: 385 QNRLEEALDLARELTVK-GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEV 443
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFEN 487
Y+ ID G + A L EM N
Sbjct: 444 TYNILIDHLCSMGKLGNALDLLNEMESN 471
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 123/243 (50%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N ++ + G ++ + + +M GC PD +++ L+ + R+ EA L
Sbjct: 335 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDL 394
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+ K + DV +N +I C++G+ F EM SG VT+ L++ C
Sbjct: 395 ARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCS 454
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + +A+ + N+M G T +I LC K R+ EA ++ + G+ +
Sbjct: 455 MGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQ-GISRSAV 513
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI GLC+ ++++A ++ +MV +G +P+ Y++ + Y K+GN++ A + + M
Sbjct: 514 TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETM 573
Query: 485 FEN 487
N
Sbjct: 574 TAN 576
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 20/310 (6%)
Query: 152 RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
R C F+ LI L +N ++E +D+ R L +GLS V T N LI + +
Sbjct: 366 RGCLPDTTTFNTLI-VALSSQN--RLEEALDLARELTVKGLSPDVYTFNILINALCKVGD 422
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
G ++ E+ ++G P+ T+N L+ G D+
Sbjct: 423 PHLGIRLFEEM------KSSG----------CTPDEVTYNILIDHLCSMGKLGNALDLLN 466
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM GC +Y+ ++ C++ R+ EAE+++++M + + V +NT+I G C+
Sbjct: 467 EMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAK 526
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A E +M G++ +++T+ ++ YC+ G++ A + M GFE + T
Sbjct: 527 RIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYG 586
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
LI LC R AL +L+ +K G+ PT K+Y +I+ L + +AL + EM
Sbjct: 587 TLINGLCKAGRTQVALKLLRGMRIK-GIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTE 645
Query: 452 KGFEPSLEIY 461
G P Y
Sbjct: 646 VGEPPDALTY 655
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 1/211 (0%)
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G + D ++ L+ V E +++ E ++ EM + ++ DVV NT+I C ++
Sbjct: 156 FGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRT 215
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A EM GV TF L+ G+ G +++A+ V M G P G T+ VLI
Sbjct: 216 AVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLIN 275
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
C RV +AL ++ + G P + +Y + GLC+ G + ALKV M+ +G +
Sbjct: 276 GYCKMGRVEDALGYIQQEIAD-GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHD 334
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
P + Y+ I+ K G ++ A + +M +
Sbjct: 335 PDVFTYNTVINCLSKNGELDEAKGIVNQMVD 365
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+ + FN L+ + +E V+ EM G +PD + + L+ C ++R A
Sbjct: 158 VQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAV 217
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EEM V D + T++ GF E G + A +M +G + VT L+NGY
Sbjct: 218 LMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGY 277
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G V+ A+ GFEP+ T + LC V AL ++ +++ G P
Sbjct: 278 CKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDL-MLQEGHDPD 336
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I L + G+++EA + +MV +G P ++ I + +E A L +
Sbjct: 337 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAR 396
Query: 483 EM 484
E+
Sbjct: 397 EL 398
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 159/370 (42%), Gaps = 43/370 (11%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIR---VALRSPE--------------NDPKL-- 141
C +++ T+I LS + A D+ R V SP+ DP L
Sbjct: 368 CLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 427
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
+LFE + + C +++LI + ++ K+ +D++ + S G T N
Sbjct: 428 RLFEEMKSS--GCTPDEVTYNILID---HLCSMGKLGNALDLLNEMESNGCPRSTVTYNT 482
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
+I + + + E++ ++ D + + R + TFN L+ G +
Sbjct: 483 IIDALCKKMRIEEAEEVFDQM-------------DAQGISR---SAVTFNTLIDGLCKAK 526
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ ++ +M + G +P+ +Y+ ++ +C++ +++A + E M E DVV Y
Sbjct: 527 RIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYG 586
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
T+I G C+ G A + R M + G+ + + ++ R ++ A+ ++ +M
Sbjct: 587 TLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEV 646
Query: 382 GFEPEGSTIEVLIGELC-DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
G P+ T +++ LC + EA D L +V G P S+ L +GL G M+
Sbjct: 647 GEPPDALTYKIVFRSLCRGGGPIKEAFDFL-VEMVNKGFMPEFSSFRMLAEGLLNLG-MD 704
Query: 441 EALKVQAEMV 450
+ L E++
Sbjct: 705 DYLISAIELI 714
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 147/360 (40%), Gaps = 47/360 (13%)
Query: 43 ATVVSLLTHHRSKSRWNHLLSLCR----SGLTPTQFS----QIALGLKNNPHLALRFFSF 94
T +L+ S++R L L R GL+P ++ AL +PHL +R F
Sbjct: 373 TTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEE 432
Query: 95 TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYREC 154
+ ++ I H+ S +L G A D+ L E++ C
Sbjct: 433 MKSSGCTPDEVTYNILIDHLCSMGKL-GNALDL----LNEMESNG--------------C 473
Query: 155 GSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVIS 214
+ ++ +I + IE+ E D + ++G+S T N LI + + K +
Sbjct: 474 PRSTVTYNTIIDALCKKMRIEEAEEVFD---QMDAQGISRSAVTFNTLIDGLCKAKRI-- 528
Query: 215 GYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
DAT I + VK ++PN T+N+++ + ++G +K D+ M
Sbjct: 529 ------------DDATELIEQMVKE--GLQPNNITYNSILTHYCKQGNIKKAADILETMT 574
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
G E D +Y L+ C+ R + A KL MR K + AYN +I +
Sbjct: 575 ANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLR 634
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD-VDSAILVYNDMCRKGFEPEGSTIEVL 393
A FREM G ++T++ + CR G + A +M KGF PE S+ +L
Sbjct: 635 DALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRML 694
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
SS +E +V AG D + +M R+G + + + RR +A+D++
Sbjct: 88 SSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLV 147
Query: 411 KARVVK--FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
++ FG+ + L+ L E K++ V EM G+G +P + + I
Sbjct: 148 LNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKAL 207
Query: 469 MKEGNVEMATMLRKEM 484
+ V A ++ +EM
Sbjct: 208 CRAHQVRTAVLMLEEM 223
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 124/242 (51%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P V T+ L+ G KVE V+ EM D Y YS ++ +C +R A
Sbjct: 133 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 192
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++++E +E + Y +I GFC+IG+M AE +M + GV + + F +++GY
Sbjct: 193 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 252
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR VD A+ + M + G E + T L L R+ EA ++L+ + K G+ P
Sbjct: 253 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEK-GVRPN 311
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY LI C EG M EA ++ EM G G EPSL Y+ +DGY+K+G++ A +
Sbjct: 312 HVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKN 371
Query: 483 EM 484
EM
Sbjct: 372 EM 373
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 114/220 (51%), Gaps = 1/220 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N FN ++ G+ R+ +K ++ + M ++G E D Y+Y+ L RM EA+ L
Sbjct: 241 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 300
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M +K V + V+Y T+I C G+M A FREM +G E S VT+ +++GY +
Sbjct: 301 RIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKK 360
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + A N+M +KG P+ + L+ C +V AL + + + + G P +
Sbjct: 361 GSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFE-EMKQRGSKPNLVA 419
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
Y LI GL +EG+ EEA ++ M+G G P +YSA +
Sbjct: 420 YTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 459
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 156/349 (44%), Gaps = 22/349 (6%)
Query: 147 LVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
++K G P V + +L+ ++I K+E + + S+ LS V +++I
Sbjct: 124 MLKVMENEGIEPTVGTYTILVDGLSAARDITKVEA---VFEEMKSKNLSGDVYFYSSVIN 180
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
R V E++ E G + PN HT+ AL+ GF + G E
Sbjct: 181 AYCRAGNVRRASEVFDECVGNG----------------IEPNEHTYGALINGFCKIGQME 224
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
E + +M G + ++ ++ +C + + +A ++ M +E DV YNT+
Sbjct: 225 AAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLA 284
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G M A+ R M GV + V++ L++ +C GD+ A ++ +M G E
Sbjct: 285 CGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAE 344
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P T V++ K + EA + K + K GL P SY L+ G C GK++ AL+
Sbjct: 345 PSLVTYNVMMDGYIKKGSIREA-ERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALR 403
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+ EM +G +P+L Y+A I G KEG E A L M + + +D
Sbjct: 404 LFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDD 452
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 1/235 (0%)
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G+ + G + EM R G + + Y+ L+ + E+ ++ + M ++ +E
Sbjct: 76 GYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEP 135
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
V Y ++ G ++ + E F EM + + ++N YCRAG+V A V+
Sbjct: 136 TVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVF 195
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
++ G EP T LI C K EA ++L + G+ + + +I G C
Sbjct: 196 DECVGNGIEPNEHTYGALINGFC-KIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 254
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+ +++AL+++ M G E + Y+ G + ++ A L + M E VR
Sbjct: 255 KNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVR 309
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 7/197 (3%)
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
S SV++ +C+ R+ A +L +EM V+ + + YN+++ + + R E + M
Sbjct: 69 SASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVM 128
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DK 400
G+E + T+ LV+G A D+ V+ +M K + +I C +
Sbjct: 129 ENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNV 188
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
RR E D V G+ P E +Y LI G C+ G+ME A + +M +G + +
Sbjct: 189 RRASEVFD----ECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIV 244
Query: 461 YSAFIDGYMKEGNVEMA 477
++ IDGY ++ V+ A
Sbjct: 245 FNTMIDGYCRKNMVDKA 261
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 207/469 (44%), Gaps = 37/469 (7%)
Query: 54 SKSRWNH--LLSLCRSGLTPTQFSQIALGLK-NNPHLALRFFSFTQHKSLCKHSLSSYAT 110
+K W H L S +TP +I +GL+ NN L +RFF + +S + L
Sbjct: 27 NKPNWEHDKTLKSLASHMTPHLAGKI-IGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQ 85
Query: 111 IIHILSRARLIGPARDVIRVALRSPENDPK--LKLFEVLVKTYRECG---SAPFVFDLLI 165
++ +L L G A+ + + ++ E+ +KL L E G S P LL+
Sbjct: 86 LLGVLVSRDLFGVAQKAVVLLIQECEDSENGVVKLMGAL-DGMTELGFRLSYPCYSTLLM 144
Query: 166 KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY-----R 220
CL N+ + V R +++ G + ++ + + G + E++ R
Sbjct: 145 --CLAKLNMGFVAFLV--YRRMVNEGFVLGGIDYRTVVNALCK-NGFVQAAEMFCCKVLR 199
Query: 221 EVFGLDSDATAGI------GKDVKRVVRV----------RPNVHTFNALMVGFYREGAFE 264
FGLD+ + D+ RV RPN T++ L+ G G E
Sbjct: 200 LGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLE 259
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ + EM GC+P +Y+VL+ C+ +A K+ +EM K +V Y +I
Sbjct: 260 EAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILI 319
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
C G++ A FR+M G+ +TF L+NGYC+ G V SA + + M + +
Sbjct: 320 DRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCK 379
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P T L+ LC + ++A +L+ RVV GL P +Y L+ G C+EG++ A
Sbjct: 380 PNIRTYNELMEGLCRVSKSYKAFLLLR-RVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 438
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+ M G EP ++A IDG K G +E A + M + + ++
Sbjct: 439 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDE 487
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 169/407 (41%), Gaps = 37/407 (9%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
A R F + C+ + +Y+ +IH L A + A ++ + P + + VL
Sbjct: 225 AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQ-LKQEMVEKGCQPSTRTYTVL 283
Query: 148 VKTYRECGSAPFVFDLL----IKCCLEVKNIE-------------KIETCVDIVRMLMSR 190
+K + G +L K C V N+ KIE + R ++
Sbjct: 284 IKAKCDIGMTDKAMKMLDEMATKAC--VPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 341
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTF 250
GL + T NALI + V+S +++ V +PN+ T+
Sbjct: 342 GLCPGIITFNALINGYCKEGWVVSAFQLL----------------SVMEKGNCKPNIRTY 385
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
N LM G R K + + G PD +Y++L+ FC+E ++ A ++ M
Sbjct: 386 NELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 445
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
+E D + +I G C++G + +A M G+ VTF L++G+C+ G
Sbjct: 446 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKD 505
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
++ +M T + L ++ EA +L +++K+GL P+ ++ LI
Sbjct: 506 VCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAML-GKMMKYGLVPSVVTHTILI 564
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+G C G+ +LK+ M G P++ Y+ I+G G VE A
Sbjct: 565 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA 611
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 121/242 (50%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNVHT+ L+ REG E+ V+ +M + G P +++ L+ +C+E + A +L
Sbjct: 310 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 369
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M N + ++ YN ++ G C + + +A R + +G+ VT+ LV+G+C+
Sbjct: 370 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 429
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G ++ A ++N M G EP+G T LI LC R+ +A IL +VK G+ E
Sbjct: 430 EGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGIL-GSMVKKGISLDEV 488
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI G C+ GK ++ + MV + ++ F+D K+ + A + +M
Sbjct: 489 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 548
Query: 485 FE 486
+
Sbjct: 549 MK 550
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 182/470 (38%), Gaps = 76/470 (16%)
Query: 65 CRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATII--HILSRARLIG 122
C+ G + F +++ K N +R ++ + LC+ S S A ++ ++ L
Sbjct: 358 CKEGWVVSAFQLLSVMEKGNCKPNIRTYN-ELMEGLCRVSKSYKAFLLLRRVVDNGLL-- 414
Query: 123 PARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETC 180
P R + + + +L + + + G P F F LI ++ +E+
Sbjct: 415 PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN-- 472
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
I+ ++ +G+S+ T ALI D G KDV +
Sbjct: 473 -GILGSMVKKGISLDEVTFTALI----------------------DGHCKIGKAKDVCFL 509
Query: 241 V------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
R HTFN + ++ + + +M + G P ++++L+ C
Sbjct: 510 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 569
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ K+ E M+ +V Y II G C G + AE M GV + T
Sbjct: 570 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 629
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI------------------GE 396
+ LV + +AG +D A + + M + G +P L+ G+
Sbjct: 630 YAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGD 689
Query: 397 L-------------CDKRRVFEALDI---LKAR--VVKFGLFPTEKSYMFLIKGLCEEGK 438
L C VF +D+ LK R + K G+ PTE Y FL+ GLC+EG+
Sbjct: 690 LDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGV-PTEDLYNFLVVGLCKEGR 748
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+ EA ++ +MV G P I S+ I+ Y K + K + +N+
Sbjct: 749 IIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNK 797
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 126/246 (51%), Gaps = 1/246 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ PNV F+ ++ +EG DV M + G EPD +Y+ LM C M EA
Sbjct: 355 KIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEA 414
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+++ M K +V +YN +I G+C+I M +A +M L G+ + +VT+ L++G
Sbjct: 415 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 474
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C G + AI ++++M G P+ T +L+ LC + EA+ +LKA + L
Sbjct: 475 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA-IEGSNLDA 533
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y I G+C G++E A + + + KG +P + Y+ I G K G ++ A L
Sbjct: 534 DILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLF 593
Query: 482 KEMFEN 487
++M EN
Sbjct: 594 RKMDEN 599
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 107/233 (45%), Gaps = 1/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ F L+ + + V + +M G PD Y+ ++L+ FC RR+ A +
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ + D +NT+I G C G++ A F + G + VT+ L+NG C+
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ +AI + M +K P +I LC R+V EA ++ + K G+ P
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITK-GISPDIF 326
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI LC + + + EMV P++ ++S +D KEG + +A
Sbjct: 327 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIA 379
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V+T N L+ F V ++ +LGC+PD +++ L+ C E ++ EA
Sbjct: 181 IPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEAL 240
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+++ + + DVV Y T++ G C++G + A R M + + + +++
Sbjct: 241 HLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSL 300
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ V A ++++M KG P+ T LI LC+ ++ + L +V + P
Sbjct: 301 CKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCE-WKHVTTLLNEMVNSKIMPN 359
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+ ++ LC+EG + A V M+ +G EP + Y+A +DG+
Sbjct: 360 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGH 405
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
S+V F L+ + + + + M G P+ T+ +LI C RR+ A +L
Sbjct: 149 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 208
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
A+++K G P ++ LI+GLC EGK+ EAL + + +G+GF+P + Y ++G K
Sbjct: 209 -AKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267
Query: 471 EGNVEMATMLRKEMFENQVR 490
GN A L + M + R
Sbjct: 268 VGNTSAAIRLLRSMVQKNCR 287
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 92/204 (45%), Gaps = 1/204 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N L+ G G + ++ EM G PD +Y +L+ C+ + EA L + +
Sbjct: 467 TYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAI 526
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
N++ D++ YN I G C GE+ A + F + G++ T+ +++G C+ G +
Sbjct: 527 EGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLL 586
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D A ++ M G +G +I F A +L+ + + G +
Sbjct: 587 DEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAE-GFSADVSTTTL 645
Query: 429 LIKGLCEEGKMEEALKVQAEMVGK 452
+++ L ++G + +++ VG+
Sbjct: 646 IVEMLSDDGLDQSFERLRLRGVGE 669
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 92/210 (43%), Gaps = 1/210 (0%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P ++ L+ + + L +M + DV N +I FC + + A
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
++ G + + TF L+ G C G + A+ +++ +GF+P+ T L+ LC
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
A+ +L++ V K P +Y +I LC++ ++ EA + +EM+ KG P +
Sbjct: 268 VGNTSAAIRLLRSMVQK-NCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIF 326
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
Y++ I + T L EM +++
Sbjct: 327 TYNSLIHALCNLCEWKHVTTLLNEMVNSKI 356
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ +N + G R G E D++ ++ G +PD +Y++++ C+ + EA KL+
Sbjct: 534 DILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLF 593
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+M + D YNTII GF E A + +EM G + T
Sbjct: 594 RKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVST 642
>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 181/429 (42%), Gaps = 49/429 (11%)
Query: 73 QFSQIALGLKN----NPHLALRFFSFT--QHKSLCKHSLSSYATIIHILSRARLIGPARD 126
+ +A GLK + LAL+F + Q KH Y HIL +AR+ A+
Sbjct: 74 SLNHMAYGLKQLRPVHGRLALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKS 133
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
++R + + F L+ TY C S P VFDLLI+ L+ I+ ++V +
Sbjct: 134 ILRHLCQMGIGSKSI--FGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGL 191
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+ G V TCN ++ + + K + ++RE+ SD + PN
Sbjct: 192 V---GFKPSVYTCNMILASMVKDKRTELVWSLFREM----SDKG------------ICPN 232
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V TFN L+ G EG +K ++ +M G P +Y+ L+ +C++ R + A +L +
Sbjct: 233 VGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELID 292
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M K +E DV YN I C A+A ++M + + VT+ L+NG+ + G
Sbjct: 293 YMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEG 352
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLFPTE 423
+ A V+N+M + P T LIG C D LD ++A ++
Sbjct: 353 KIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNV 412
Query: 424 KSYM-------------------FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
M L+ LC +GK+ EA K M G P+ Y
Sbjct: 413 TEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCI 472
Query: 465 IDGYMKEGN 473
I+GY G+
Sbjct: 473 INGYGSIGD 481
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 149/370 (40%), Gaps = 76/370 (20%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+ + ++++ ++ +G+ V T N I + Y + +++
Sbjct: 283 RYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKM------------- 329
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R + PN T+N L+ GF +EG V+ EM++ P+C +Y+ L+ C
Sbjct: 330 ---RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHV 386
Query: 296 RRMREAEKLWEEMRDKNV---EH--------------------DVVAYNTIIGGFCEIGE 332
EA +L + M + EH D N ++ C G+
Sbjct: 387 GDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGK 446
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE------ 386
+ AE+F M G+ +S+T++ ++NGY GD +A ++DM + G P
Sbjct: 447 LGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGS 506
Query: 387 --------GSTIE---------------------VLIGELCDKRRVFEALDILKARVVKF 417
G+ +E L+ E C + EA+ + ++V+
Sbjct: 507 LLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFD-KMVQN 565
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG-FEPSLEIYSAFIDGYMKEGNVEM 476
+ P +Y L+ GLC +GK A+ + +G+G P+ +Y+ +DG K G+ +
Sbjct: 566 NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKA 625
Query: 477 ATMLRKEMFE 486
A +EM +
Sbjct: 626 AFYFFEEMMK 635
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 12/256 (4%)
Query: 242 RVRPNVHTFNALMVGFYREG-AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V P+ +T+++L+ G R+G A V M R P+ Y+ L+ + +
Sbjct: 566 NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKA 625
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +EEM K D VA+N II G+M +A +FF M GV + T+ L++
Sbjct: 626 AFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLH 685
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK-----------RRVFEALDI 409
G+ + + + +Y+ M R+G P+ T LI L + + E +
Sbjct: 686 GFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTV 745
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
+ +++ G+ P Y+ LI G+C G ++ A K++ EM GF SA + G +
Sbjct: 746 VLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 805
Query: 470 KEGNVEMATMLRKEMF 485
G E A ++ M
Sbjct: 806 HCGKTEDAMLVLDHML 821
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 114/271 (42%), Gaps = 10/271 (3%)
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVH-----TFNALMVGFYREGAFEKVEDVWVEM 273
+ E GL + + + +K + N H T N L+ R+G + E M
Sbjct: 398 HMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 457
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
+R+G P+ +Y ++ + A +++M Y +++ G C+ G +
Sbjct: 458 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 517
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
A++F + SV + L+ C++G++ A+ +++ M + P+ T L
Sbjct: 518 VEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSL 577
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ LC K + A+ + + + LFP Y L+ GL + G + A EM+ KG
Sbjct: 578 LTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKG 637
Query: 454 FEPSLEIYSAFID-----GYMKEGNVEMATM 479
P ++A ID G M + N +TM
Sbjct: 638 TCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 668
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 13/256 (5%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE-------- 294
V PN+ T+N L+ GF ++ A + ++ M R G PD ++ L+ +
Sbjct: 673 VCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGV 732
Query: 295 ----ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ M E+ + EM + V Y T+I G C +G++ A + EM G S
Sbjct: 733 KLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGS 792
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
V +V G G + A+LV + M R P +T L+ C ++ EAL L
Sbjct: 793 HEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK-L 851
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
K + GL +Y LI G+C G A ++ EM + P++ Y+ +D
Sbjct: 852 KGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISA 911
Query: 471 EGNVEMATMLRKEMFE 486
N+ L ++ E
Sbjct: 912 ANNLIQGEKLLTDLQE 927
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%)
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
+A++ G G E V M R+ P +++ LM FC + ++ EA KL M
Sbjct: 798 SAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMEL 857
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
++ DVVAYN +I G C G+ A A E + EM + + T+ LV+ A ++
Sbjct: 858 CGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQ 917
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGEL 397
+ D+ +G G + + L EL
Sbjct: 918 GEKLLTDLQERGLISWGGSTQHLDKEL 944
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 54/118 (45%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+R+ P + TF LM F R+ + + M G + D +Y+VL+ C
Sbjct: 823 MRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAA 882
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
A +L+EEMR +++ ++ Y ++ + + E+ ++ G+ S + +HL
Sbjct: 883 AFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLISWGGSTQHL 940
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 135/243 (55%), Gaps = 7/243 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV ++++L+ GF G E+ + ++ EM G +P+ ++VL+ + C+E ++ EA+KL
Sbjct: 95 PNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKL 154
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E + + D+V YN++I GFC+IG+++ A + F M G E + +++ L+NGYC+
Sbjct: 155 LEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCK 214
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA---LDILKARVVKFGLFP 421
V+ A+ +YN+M + G P T L+ L +V +A ++KA G+
Sbjct: 215 IWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKAS----GISV 270
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y+ + GLC+ G + EA+++ E+ F+ E YS IDG K G VE+A
Sbjct: 271 DSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFF 330
Query: 482 KEM 484
K++
Sbjct: 331 KQL 333
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 108/239 (45%), Gaps = 39/239 (16%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N+L+ GF + G +++ M GCE + SY++L+ +C+ ++ EA L+ EM
Sbjct: 169 TYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEM 228
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV--------------- 353
+V Y+T++ G + G++ A + F M SG+ S
Sbjct: 229 PQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVL 288
Query: 354 --------------------TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
++ L++G C+AG V+ A + + ++G +P T ++
Sbjct: 289 FEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIM 348
Query: 394 IGELCDKRRVFEALDILKARVVKF---GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
I C +V +A +IL ++ K G P +Y L++G CE K+EE + + +M
Sbjct: 349 IHGFCRVEQVDKA-NILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 88/170 (51%), Gaps = 3/170 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPNV T++ L+ G + G ++ M G D Y + + C+ + EA +
Sbjct: 234 RPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAME 293
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+ E++ N + D +Y+ +I G C+ G++ A EFF+++ G++ + VT +++G+C
Sbjct: 294 LFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFC 353
Query: 364 RAGDVDSAILVYNDMCR---KGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
R VD A +++ M + G P+ T L+ C+ ++ E +++L
Sbjct: 354 RVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLL 403
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 19/148 (12%)
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M L+G+ T L N C V + + R+G+ P+ T LI LC R
Sbjct: 1 MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ A I+ I GLC+ G +EA ++ EM +G P++ YS
Sbjct: 61 ISVATCII-------------------IDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYS 101
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQVR 490
+ + G+ G +E + L EM + V+
Sbjct: 102 SLVHGFCCAGKLEESKRLFNEMVDQGVQ 129
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 134/534 (25%), Positives = 221/534 (41%), Gaps = 88/534 (16%)
Query: 22 LLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGL 81
LLS F+ + S P N I ++ + + SK+ N L S +TP ++
Sbjct: 7 LLSVFNKTVSFPSKQHQPNEIVHKITQILVNYSKTSNNPDLHSIISCITPHVTYRVLSQP 66
Query: 82 KNNPHLALRFFSF--TQHKSLC-KHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND 138
PH L FF F TQH ++ K L ++ +I L AR + ++ + + +
Sbjct: 67 ILQPHSCLAFFHFLKTQHSNISLKPDLKAHLILISRLFEARKFATMKSILNGLVTDSDIE 126
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCC------------------------------ 168
+ LV + F D+L + C
Sbjct: 127 CPVSSIVDLVDEFESHFVEKFC-DMLFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCFV 185
Query: 169 --LEVKNIEKIETCVDIV-RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGL 225
L +K +++ CV RM+ S ++V + +I + R V E+ E+ G
Sbjct: 186 LLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVG- 244
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
GI V+PNV T+N L+ + + V+++ M + +Y
Sbjct: 245 -----KGI---------VKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATY 290
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT----------------------- 322
S+L+ + + EAEK++EEMR+KN+E DV Y++
Sbjct: 291 SILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQ 350
Query: 323 ------------IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
+IGG C+ G+M AE EM GV+ + V F ++GYCR G +D
Sbjct: 351 RDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDE 410
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A+ + M +KG + T +L LC R EA IL + V K G+ P ++ I
Sbjct: 411 ALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEK-GVKPNVVTFTMFI 469
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ C+EG + EA ++ +M KG P++ Y+ ID Y K+ V+ A ++ EM
Sbjct: 470 EIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEM 523
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 121/242 (50%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN HT+ AL+ G + G E E + +EM G + + ++ M +C +M EA +L
Sbjct: 355 PNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRL 414
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M K + DV YN + G C++ A+ M GV+ + VTF + YC+
Sbjct: 415 QAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCK 474
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G++ A ++ DM +KG P T LI C K +V +A I K+ ++ GL P
Sbjct: 475 EGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKI-KSEMINKGLLPDLY 533
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C G+++EALK+ EM KG ++ Y++ I G KEG + A L EM
Sbjct: 534 TYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEM 593
Query: 485 FE 486
+
Sbjct: 594 MK 595
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 1/225 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ FN M G+ R G ++ + M + G D ++Y++L C+ R EA+ +
Sbjct: 391 NLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCIL 450
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M +K V+ +VV + I +C+ G +A AE FR+M G + +T+ L++ YC+
Sbjct: 451 NSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKK 510
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
V A + ++M KG P+ T LI C RV EAL + +K G+ +
Sbjct: 511 EKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLK-GITRNVAT 569
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
Y +I GL +EG+ +EA K+ EM+ G P ++++ + + K
Sbjct: 570 YTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 92/170 (54%), Gaps = 1/170 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+PNV TF + + +EG + E ++ +M + G P+ +Y+ L+ +C++ ++++A
Sbjct: 458 VKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAH 517
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+ EM +K + D+ Y+++I G C +G + A + F EM L G+ + T+ +++G
Sbjct: 518 KIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGL 577
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
+ G D A +Y++M + G P+ L+G K LDI KA
Sbjct: 578 SKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSF-HKPLTHAGLDIQKA 626
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 99/188 (52%), Gaps = 1/188 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ +V T+N L G + +++ + + M G +P+ ++++ + ++C+E + EAE
Sbjct: 423 INADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAE 482
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ +M K +++ YNT+I +C+ ++ +A + EM G+ T+ L++G
Sbjct: 483 RLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGE 542
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G VD A+ ++N+M KG +T +I L + R EA L ++K GL P
Sbjct: 543 CIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFK-LYDEMMKIGLIPD 601
Query: 423 EKSYMFLI 430
++ + L+
Sbjct: 602 DRVFTSLV 609
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 205/441 (46%), Gaps = 31/441 (7%)
Query: 67 SGLTPTQFSQIALG-LKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPAR 125
S +T +F L +K+ P ALRFF + + + S +++ I+ IL++ + PA
Sbjct: 46 SAVTQPEFLLRVLNSVKHRPLTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAY 105
Query: 126 DVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVR 185
V+ A+ + L + V + R + + DLLI+ + +EK C+ +
Sbjct: 106 WVMEKAIEVKVDGGVLDVL-VGIGCGRNSEVSVKLLDLLIQVFAKKLILEK---CLMVFY 161
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG-------------LDSDATAG 232
+++ GL V CN ++ + V E+Y + +DS G
Sbjct: 162 KMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEG 221
Query: 233 -IGK-----DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
+G+ DV R+ PN ++N L+ G +G F++ +++ +M+ LG + ++Y+
Sbjct: 222 EVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYN 281
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L+ FC++ EA L EM + VV YNTI+ C +G ++ A + M
Sbjct: 282 PLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNE 341
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
+ V++ L+ GY R G+ A+L+++++ K P T LI C
Sbjct: 342 DLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGN---- 397
Query: 407 LDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
LDI +K ++K GL P ++ L++G C+ G + A ++ EM+ +G +P Y+
Sbjct: 398 LDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTT 457
Query: 464 FIDGYMKEGNVEMATMLRKEM 484
I G +K GN A +++EM
Sbjct: 458 RIVGELKLGNPSKAFGMKEEM 478
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 154/336 (45%), Gaps = 34/336 (10%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV------------ 222
E E D+ R ++ RG V T N +++ + R G +S Y +V
Sbjct: 291 EMFEEANDLRREMLGRGALPTVVTYNTIMYSLCR-LGRVSDARRYLDVMVNEDLMPDLVS 349
Query: 223 -----FG---LDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
+G L + A A + R + P+V T+N L+ G R G + + + +M
Sbjct: 350 YNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMI 409
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
+ G PD ++++L+ FC+ + A++L++EM + ++ D +AY T I G ++G +
Sbjct: 410 KHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPS 469
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
+A EM G +T+ L+NG C+ G+ D A + M +G P+ T +I
Sbjct: 470 KAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSII 529
Query: 395 ------GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
G L VF D+LK G+ P+ +Y LI G+++ A K E
Sbjct: 530 HAHLISGLLRKAEEVFS--DMLKK-----GIHPSVVTYTVLIHSYAVRGRLDFAKKYFDE 582
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
M KG P++ Y+A I G KE +++A L EM
Sbjct: 583 MQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEM 618
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 166/385 (43%), Gaps = 37/385 (9%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
++ +Y TI++ L R + AR + V + + + P L + L+ Y G+ F L
Sbjct: 311 TVVTYNTIMYSLCRLGRVSDARRYLDVMV-NEDLMPDLVSYNTLIYGYSRLGN--FAEAL 367
Query: 164 LIKCCLEVKN----IEKIETCVD-------------IVRMLMSRGLSVKVSTCNALIWEV 206
L+ L KN + T +D + ++ GL V T L+
Sbjct: 368 LLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILV--- 424
Query: 207 SRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
RG + + +E+F D + G+ +P+ + +VG + G K
Sbjct: 425 -RGFCQMGNLPMAKELF--DEMLSRGL----------KPDCIAYTTRIVGELKLGNPSKA 471
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ EM G PD +Y+VL+ C+ +A +L ++MR + + D V Y +II
Sbjct: 472 FGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHA 531
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
G + +AEE F +M G+ S VT+ L++ Y G +D A +++M KG P
Sbjct: 532 HLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPN 591
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T LI LC + + A ++ A + G+ P + +Y LI ++ALK+
Sbjct: 592 VITYNALIYGLCKENMMDVAYNLF-AEMESKGVSPNKYTYTILINENSNLQYWQDALKLY 650
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKE 471
+M+ + +P +SA + K+
Sbjct: 651 KDMLDREIKPDSCTHSALMKHLSKD 675
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 103/202 (50%), Gaps = 1/202 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ G + G F+ ++ +M G PD +Y+ ++ +R+AE++
Sbjct: 485 PDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEV 544
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M K + VV Y +I + G + A+++F EM GV + +T+ L+ G C+
Sbjct: 545 FSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCK 604
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+D A ++ +M KG P T +LI E + + +AL + K + + + P
Sbjct: 605 ENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDR-EIKPDSC 663
Query: 425 SYMFLIKGLCEEGKMEEALKVQ 446
++ L+K L ++ K+ L+++
Sbjct: 664 THSALMKHLSKDYKLLAVLRLE 685
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
R+ + P+ T+ +++ G K E+V+ +M + G P +Y+VL+ + R+
Sbjct: 514 RLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRL 573
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
A+K ++EM+DK V +V+ YN +I G C+ M A F EM GV + T+ L
Sbjct: 574 DFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTIL 633
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+N A+ +Y DM + +P+ T L+ L ++ L
Sbjct: 634 INENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVL 682
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV T+NAL+ G +E + +++ EM G P+ Y+Y++L+ + ++A
Sbjct: 588 VSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDAL 647
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL+++M D+ ++ D ++ + M + ++ + + +E+ + + + +
Sbjct: 648 KLYKDMLDREIKPDSCTHSAL---------MKHLSKDYKLLAVLRLENLPLAIVEINSTW 698
Query: 363 CRAGDVDSAILVYNDMCR--KGFEPEGSTIEVLIGELCDKRRVFEAL 407
G V N R FE +G +E +G+LC K RV +AL
Sbjct: 699 IAEGFVKLEESKNNSHFRAIHVFE-KGGFLEPFLGKLCAKSRVLKAL 744
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 139/537 (25%), Positives = 227/537 (42%), Gaps = 81/537 (15%)
Query: 20 PQLLSQFSTSSSTPPSDQSHNLIATVVS-LLTHHRSKSRWNHLLSLCRSGLTPTQFSQIA 78
P++ S + S+ PS + + IA +S L +KS L S L+ +
Sbjct: 4 PKMWSNLKKAFSSNPSLKLNQEIAGKISKTLVSSGAKS-----LQTTPSLLSSLNSQTVH 58
Query: 79 LGLKNNPHLA---LRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDV-----IRV 130
L L N+ A L FF F + K+ K L +Y T+I L R+R IR
Sbjct: 59 LILSNHILTAESCLDFFHFIR-KNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRH 117
Query: 131 ALRSPENDPKLKLFEVLVKTY-------RECGSAPF---VFDLLIKCCLEVKNIEKIETC 180
D L++ ++ + +C A F FDLL + + K +
Sbjct: 118 LFNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVYADNKMFGE---A 174
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA--------G 232
++ + +G + +C + + RG V S +R + LD + T G
Sbjct: 175 LEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDG 234
Query: 233 IGK-----------DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
+ K D V+ NV T+NA + G+++ V ++ M + G +
Sbjct: 235 LCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACN 294
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
+Y++L+ F ++ EA++L+EEMR+K +E DV Y +II C G + RA F
Sbjct: 295 VVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFD 354
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM G+ S+ T+ L++G C+AG +++A ++ N+M KG + LI C+
Sbjct: 355 EMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESG 414
Query: 402 RVFEALDI----------------------------------LKARVVKFGLFPTEKSYM 427
V EAL + L +V+ G+ P S+
Sbjct: 415 MVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFT 474
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LI C+EG EA +V EM KG P++ Y+ IDGY K GN++ A L+ E+
Sbjct: 475 TLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 531
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 124/249 (49%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ HT+ AL+ G + G E + + EM G + + ++ L+ +CE + EA +L
Sbjct: 363 PSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRL 422
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M K +E DV AYN+I G C++ A+ M GV ++++F L++ YC+
Sbjct: 423 QVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCK 482
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ A V+ +M KG P T VLI + + EA LK + GL P
Sbjct: 483 EGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK-LKDELENRGLIPDVY 541
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ LI G C +GK++ ALK+ EM +G P++ Y+A I G K+G E A L EM
Sbjct: 542 TCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEM 601
Query: 485 FENQVRQED 493
E + +D
Sbjct: 602 KETGLTPDD 610
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 154/331 (46%), Gaps = 22/331 (6%)
Query: 137 NDPKLKLFEVLVKTYRECG--SAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSV 194
N K++ + L + RE G + +V+ +I C N+++ D + +GL
Sbjct: 307 NIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFD---EMTDKGLIP 363
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALM 254
T ALI V + + + + E+ G G D+ V+ FN L+
Sbjct: 364 SAHTYGALIHGVCKAGQMEAAQMLVNEM--------QGKGIDLNPVI--------FNTLI 407
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
G+ G ++ + V M + G E D ++Y+ + + C+ R EA+ L M ++ V
Sbjct: 408 DGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVS 467
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
+ +++ T+I +C+ G A+ FREM G + +T+ L++GY + G++ A +
Sbjct: 468 PNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKL 527
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
+++ +G P+ T LI C +V AL + + + GL P +Y +I GL
Sbjct: 528 KDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFD-EMPQRGLVPNVVTYTAMISGLS 586
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
++G+ EEA K+ EM G P +YS+ +
Sbjct: 587 KDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 83/155 (53%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN +F L+ + +EG F + + V+ EM G P+ +Y+VL+ + + M+EA
Sbjct: 466 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 525
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL +E+ ++ + DV ++I G C G++ A + F EM G+ + VT+ +++G
Sbjct: 526 KLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGL 585
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+ G + A +Y++M G P+ + L+G L
Sbjct: 586 SKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 133/253 (52%), Gaps = 10/253 (3%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V TF+AL+ F +EG F + E+++ EM P +YS ++ FC++ R+ A
Sbjct: 318 KINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAA 377
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
E ++ K D++ +NT+I G+C + + EM +G+ ++++T+ L++G
Sbjct: 378 EHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHG 437
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK----- 416
+C+ GD+++A + +M G P T L+ LCD ++ +AL++ KA
Sbjct: 438 FCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDID 497
Query: 417 -----FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
G+ P ++Y LI GL EGK EA ++ EM +G P YS+ IDG K+
Sbjct: 498 ASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 557
Query: 472 GNVEMATMLRKEM 484
++ AT + M
Sbjct: 558 SRLDEATQMFDSM 570
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 131/253 (51%), Gaps = 12/253 (4%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+++++ GF ++ + E ++ GC PD +++ L+A +C +R+ +
Sbjct: 354 IIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGI 413
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL EM + + + + Y T+I GFC++G++ A++ +EM SGV + VT L++G
Sbjct: 414 KLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGL 473
Query: 363 CRAGDVDSAILVYNDMCR-----------KGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
C G + A+ ++ M + G EP+ T +LI L ++ + EA + L
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEE-LY 532
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ G+ P +Y +I GLC++ +++EA ++ M K F P + ++ I GY K
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKA 592
Query: 472 GNVEMATMLRKEM 484
G V+ L EM
Sbjct: 593 GMVDDGLELFCEM 605
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 132/259 (50%), Gaps = 1/259 (0%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
D+ + + + ++ V + PNV +N ++ G +++G ++++EM PD +Y
Sbjct: 232 DTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTY 291
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ ++ FC R +AE+L +EM ++ + DVV ++ +I F + G+ AEE + EM
Sbjct: 292 NCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLP 351
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
+ S+VT+ +++G+C+ +D+A ++ KG P+ T LI C +RV +
Sbjct: 352 RSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDD 411
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+ +L + + GL +Y LI G C+ G + A + EM+ G P++ + +
Sbjct: 412 GIKLLH-EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLL 470
Query: 466 DGYMKEGNVEMATMLRKEM 484
DG G ++ A + K M
Sbjct: 471 DGLCDNGKLKDALEMFKAM 489
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 127/239 (53%), Gaps = 9/239 (3%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATAGIGKDVKR 239
D+++ ++S G+ V TCN L+ + + E+++ + +D DA+ +
Sbjct: 449 DLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDAS-------RP 501
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V P+V T+N L+ G EG F + E+++ EM G PD +YS ++ C++ R+
Sbjct: 502 FNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 561
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
EA ++++ M K+ DVV +NT+I G+C+ G + E F EMG G+ + ++T+ L+
Sbjct: 562 EATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLI 621
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
G+ + ++D A+ ++ +M G P+ TI ++ L K + A+ +L+ + G
Sbjct: 622 YGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQMSVG 680
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 128/276 (46%), Gaps = 11/276 (3%)
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW--VEMARL 276
+ E+ GLD DA G V+ R P+V F LM R G + V + +EM R+
Sbjct: 56 FHEIKGLD-DAIDLFGYMVRS--RPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRM 112
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
C + YS+++LM FC ++ A + ++ VV +NT++ G C ++ A
Sbjct: 113 PC--NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEA 170
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ F +M + + VTF L+NG CR G V A+ + + M G +P T ++
Sbjct: 171 LDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDG 226
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+C AL++L+ + P Y +I GL ++G+ +A + EM K P
Sbjct: 227 MCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFP 286
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ Y+ I+G+ G A L +EM E ++ +
Sbjct: 287 DIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPD 322
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 31/291 (10%)
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE----------------VFGLDSDATAG 232
++G S + T N LI R K V G ++ E + G
Sbjct: 386 TKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLN 445
Query: 233 IGKDVKRVV---RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL-----------GC 278
+D+ + + V PNV T N L+ G G + +++ M + G
Sbjct: 446 AAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGV 505
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
EPD +Y++L+ E + EAE+L+EEM + + D + Y+++I G C+ + A +
Sbjct: 506 EPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 565
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F MG VTF L+ GYC+AG VD + ++ +M ++G + T LI
Sbjct: 566 MFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFR 625
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
+ ALDI + ++ G++P + ++ GL + ++E A+ + ++
Sbjct: 626 KVDNIDGALDIFQ-EMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDL 675
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 6/238 (2%)
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L GF+ + D++ M R P + LM V R L ++M
Sbjct: 52 LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ + ++ ++ FC ++ A F ++ G + VTF L++G C + A+
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+++ MC+ P T L+ LC + RV EA+ +L R+++ GL P + +Y ++ G
Sbjct: 172 DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLD-RMLEDGLQPNQITYGTIVDG 226
Query: 433 LCEEGKMEEALKVQAEMVG-KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+C+ G AL + +M P++ IY+ IDG K+G A L EM E ++
Sbjct: 227 MCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEI 284
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 208/492 (42%), Gaps = 43/492 (8%)
Query: 25 QFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNN 84
F S P Q L+ + S+ R +L S + + +KN+
Sbjct: 49 NFPDYSPKKPIIQDSELVHRI-SIAIKQRRSEPLRRVLKPYESKFRADHLIWVLMNIKND 107
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF 144
L L FF + + SL + + I + ++ + AR +I+ +P D
Sbjct: 108 YRLVLSFFEWACLRR--DPSLEARCIVAQIATASKDLKMARKLIQDFWVNPNLD------ 159
Query: 145 EVLVKTYRECGSAPFVFDLLIK---CCLEVKNIE----------KIETCVDIVRMLMSRG 191
V V R+ + LLI C L + ++ K E + ++ + +G
Sbjct: 160 -VGVSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKG 218
Query: 192 LSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATA------GIGK-------- 235
L T N +I + + V + RE+ G+ D G K
Sbjct: 219 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAY 278
Query: 236 ---DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
D + ++ P+ T+ A++ G + G + + ++ EM EPD +Y+ L+ +
Sbjct: 279 RLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 338
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C+E +M+EA L +M + ++V Y + G C+ GE+ A E EM G+E +
Sbjct: 339 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 398
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
T+ LVNG C+AG++D A+ + DM GF P+ T L+ C R + A ++L+
Sbjct: 399 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLR- 457
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+++ L PT ++ L+ G C G +E+ K+ M+ KG P+ Y++ I Y
Sbjct: 458 QMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRN 517
Query: 473 NVEMATMLRKEM 484
N+ T + + M
Sbjct: 518 NMRATTEIYRGM 529
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 128/248 (51%), Gaps = 6/248 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+ AL G + G + ++ EM R G E + Y+Y+ L+ C+ + +A KL
Sbjct: 361 PNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKL 420
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M D V Y T++ +C+ EM RA E R+M ++ + VTF L+NG+C
Sbjct: 421 MKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCM 480
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G ++ + M KG P +T LI + C + + +I + K G+ P
Sbjct: 481 SGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK-GVVPDGN 539
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LIKG C+ M+EA + +MVGKGF ++ Y+A I G+ K A +E+
Sbjct: 540 TYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEA----REL 595
Query: 485 FENQVRQE 492
FE Q+R+E
Sbjct: 596 FE-QMRRE 602
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 121/241 (50%), Gaps = 1/241 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N++T+N+L+ G + G ++ + +M G PD +Y+ LM +C+ R M A +L
Sbjct: 397 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 456
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M D+ ++ VV +N ++ GFC G + E+ + M G+ ++ T+ L+ YC
Sbjct: 457 RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIR 516
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
++ + +Y MC KG P+G+T +LI C R + EA L +V G T S
Sbjct: 517 NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW-FLHRDMVGKGFNLTVSS 575
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LIKG + K EA ++ +M +G EIY+ F D EG +E+ L E
Sbjct: 576 YNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAI 635
Query: 486 E 486
E
Sbjct: 636 E 636
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL EEM+ K ++ + YN +I C+ G++A AE REM G+ V + L++G+
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 268
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G+V SA ++++M ++ P+ T
Sbjct: 269 CKLGNVSSAYRLFDEMQKRKISPDFIT--------------------------------- 295
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y +I GLC+ G++ EA K+ EMV K EP Y+A IDGY KEG ++ A L
Sbjct: 296 ---YTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHN 352
Query: 483 EMFE 486
+M +
Sbjct: 353 QMLQ 356
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%)
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
GL P +Y +I LC+ GK+ EA +V EM+ +G P IY+ IDG+ K GNV A
Sbjct: 218 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 277
Query: 478 TMLRKEMFENQV 489
L EM + ++
Sbjct: 278 YRLFDEMQKRKI 289
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
+I R + ++G+ +T N LI + + + + ++R++ G + T
Sbjct: 523 TEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT---------- 572
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V ++NAL+ GFY+ F + +++ +M R G D Y++ + +E +M
Sbjct: 573 ------VSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMEL 626
Query: 301 AEKLWEEMRDKNVEHDVVAYNT 322
+L +E +K + D+ NT
Sbjct: 627 TLELCDEAIEKCLVGDIQTKNT 648
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 155/326 (47%), Gaps = 20/326 (6%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATA------- 231
V ++ + ++G ++ CN ++ + V + R++ FG ++D +
Sbjct: 166 VRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225
Query: 232 --------GIGKDVKRVVRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
+ + + +VRV PN+ TFN L+ R G FE+V +V +M+ GC PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
Y+ ++ C+E + A ++ M ++ +VV YNT++ G C AEE
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM VTF LV+ +C+ G VD I + M G P+ T +I C +
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ EA+ +LK+ + G P SY ++KGLC G+ +A ++ ++M+ +G P+ +
Sbjct: 406 LIDEAVMLLKS-MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTF 464
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFEN 487
+ I+ K+G VE A L K+M N
Sbjct: 465 NTLINFLCKKGLVEQAIELLKQMLVN 490
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV +N ++ G +++ E++ EM + C D ++++L+ FC+ +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L E+M DV+ Y T+I GFC+ G + A + M G + ++V++ ++ G
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C AG A + + M ++G P T LI LC K V +A+++LK +V G P
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPD 495
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY +I GL + GK EEAL++ MV KG P+ IYS+ +EG V +
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555
Query: 483 EMFENQVRQE 492
+ + +R +
Sbjct: 556 NIKDTTIRSD 565
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 7/256 (2%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V PN +TF ++ G G +V EM+ GC P Y V++ C R
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ ++ E M K D N ++ CE G + A R++ G E+ V++ ++
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 361 GYC---RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
G C R GDV+ + ++M R P T LIG LC + +FE + + A++ +
Sbjct: 225 GLCMAKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLC-RNGLFERVHEVLAQMSEH 280
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P + Y +I G+C+EG +E A ++ M G +P++ Y+ + G + A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340
Query: 478 TMLRKEMFENQVRQED 493
L EMF+ +D
Sbjct: 341 EELLSEMFQKDCPLDD 356
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 146/330 (44%), Gaps = 26/330 (7%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD---SDATAGI 233
+E +I+ + S GL V N ++ + + E+ E+F D D T I
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 234 GKD-------VKRVVRV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
D V RV+ + P+V T+ ++ GF +EG ++ + M+ G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C+P+ SY++++ C R +AE+L +M + + V +NT+I C+ G + +A
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG---STIEVLI 394
E ++M ++G +++ +++G +AG + A+ + N M KG P S+I +
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+V + D +K ++ Y +I LC+ + + A+ A MV G
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIR----SDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P+ Y+ I G EG + A L E+
Sbjct: 598 MPNESTYTMLIKGLASEGLAKEAQELLSEL 627
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 103/210 (49%), Gaps = 1/210 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN ++ ++ G G + E++ +M + GC P+ +++ L+ C++ + +A +
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L ++M D+++Y+T+I G + G+ A E M G+ +++ + +
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G V+ I +++++ + +I LC + A+D A +V G P E
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFF-AYMVSNGCMPNE 601
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+Y LIKGL EG +EA ++ +E+ +G
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 86/235 (36%), Gaps = 68/235 (28%)
Query: 317 VVAYNTIIGGFCEIGE--------------------------------MARAEEFFREMG 344
VVAYN ++ G+C G+ +A A E EM
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G + ++ CR+G +++ V M KG + +++ +C++ V
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKG-------------------------------- 432
EA+ +L+ ++ FG SY ++KG
Sbjct: 199 EAVGLLR-KLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257
Query: 433 ---LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LC G E +V A+M G P + +Y+ IDG KEG++E+A + M
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 155/326 (47%), Gaps = 20/326 (6%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATA------- 231
V ++ + ++G ++ CN ++ + V + R++ FG ++D +
Sbjct: 166 VRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225
Query: 232 --------GIGKDVKRVVRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
+ + + +VRV PN+ TFN L+ R G FE+V +V +M+ GC PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
Y+ ++ C+E + A ++ M ++ +VV YNT++ G C AEE
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM VTF LV+ +C+ G VD I + M G P+ T +I C +
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ EA+ +LK+ + G P SY ++KGLC G+ +A ++ ++M+ +G P+ +
Sbjct: 406 LIDEAVMLLKS-MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTF 464
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFEN 487
+ I+ K+G VE A L K+M N
Sbjct: 465 NTLINFLCKKGLVEQAIELLKQMLVN 490
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV +N ++ G +++ E++ EM + C D ++++L+ FC+ +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L E+M DV+ Y T+I GFC+ G + A + M G + ++V++ ++ G
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C AG A + + M ++G P T LI LC K V +A+++LK +V G P
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPD 495
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY +I GL + GK EEAL++ MV KG P+ IYS+ +EG V +
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555
Query: 483 EMFENQVRQE 492
+ + +R +
Sbjct: 556 NIKDTTIRSD 565
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 7/256 (2%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V PN +TF ++ G G +V EM+ GC P Y V++ C R
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ ++ E M K D N ++ CE G + A R++ G E+ V++ ++
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 361 GYC---RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
G C R GDV+ + ++M R P T LIG LC + +FE + + A++ +
Sbjct: 225 GLCMAKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLC-RNGLFERVHEVLAQMSEH 280
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P + Y +I G+C+EG +E A ++ M G +P++ Y+ + G + A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340
Query: 478 TMLRKEMFENQVRQED 493
L EMF+ +D
Sbjct: 341 EELLSEMFQKDCPLDD 356
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 146/330 (44%), Gaps = 26/330 (7%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD---SDATAGI 233
+E +I+ + S GL V N ++ + + E+ E+F D D T I
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 234 GKD-------VKRVVRV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
D V RV+ + P+V T+ ++ GF +EG ++ + M+ G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C+P+ SY++++ C R +AE+L +M + + V +NT+I C+ G + +A
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG---STIEVLI 394
E ++M ++G +++ +++G +AG + A+ + N M KG P S+I +
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+V + D +K ++ Y +I LC+ + + A+ A MV G
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIR----SDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P+ Y+ I G EG + A L E+
Sbjct: 598 MPNESTYTMLIKGLASEGLAKEAQELLSEL 627
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 103/210 (49%), Gaps = 1/210 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN ++ ++ G G + E++ +M + GC P+ +++ L+ C++ + +A +
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L ++M D+++Y+T+I G + G+ A E M G+ +++ + +
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G V+ I +++++ + +I LC + A+D A +V G P E
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFF-AYMVSNGCMPNE 601
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+Y LIKGL EG +EA ++ +E+ +G
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 86/235 (36%), Gaps = 68/235 (28%)
Query: 317 VVAYNTIIGGFCEIGE--------------------------------MARAEEFFREMG 344
VVAYN ++ G+C G+ +A A E EM
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G + ++ CR+G +++ V M KG + +++ +C++ V
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKG-------------------------------- 432
EA+ +L+ ++ FG SY ++KG
Sbjct: 199 EAVGLLR-KLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257
Query: 433 ---LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LC G E +V A+M G P + +Y+ IDG KEG++E+A + M
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 126/242 (52%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ +T+N L+ G G V EM R C PD +Y++L+ C+ ++A
Sbjct: 28 VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 87
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL +EMRDK D+V YN ++ G C+ G + A EF + + G E ++V++ ++ G
Sbjct: 88 KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 147
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C A + A + +M +KG P T +LI LC K V AL++L+ ++ K+G P
Sbjct: 148 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE-QIPKYGCTPN 206
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY L+ C++ KM++A+ MV +G P + Y+ + + G V++A L
Sbjct: 207 SLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH 266
Query: 483 EM 484
++
Sbjct: 267 QL 268
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV TFN L+ R+G E +V ++ + GC P+ SY+ L+ FC++++M +A
Sbjct: 170 PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAF 229
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + D+V+YNT++ C GE+ A E ++ G +++ +++G +
Sbjct: 230 LDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTK 289
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG A+ + N+M KG +P+ T + LC + R+ +A+ +V G+ P
Sbjct: 290 AGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF-GKVQDMGIRPNTV 348
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y +I GLC+ + A+ + A M+G G P+ Y+ I+G EG ++ A L E+
Sbjct: 349 LYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 133/269 (49%), Gaps = 3/269 (1%)
Query: 224 GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
G ++A A + + ++R R P+V T+ L+ + +++ + EM GC PD
Sbjct: 46 GRTANALAVLDEMLRR--RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIV 103
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+Y+V++ C+E R+ +A + + + E + V+YN ++ G C AEE EM
Sbjct: 104 TYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 163
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G G + VTF L++ CR G V+ A+ V + + G P + L+ C ++++
Sbjct: 164 GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKM 223
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
+A+ L V + G +P SY L+ LC G+++ A+++ ++ KG P L Y+
Sbjct: 224 DKAMAFLDLMVSR-GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 282
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQVRQE 492
IDG K G + A L EM ++ +
Sbjct: 283 VIDGLTKAGKTKEALELLNEMVSKGLQPD 311
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 5/241 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N L+ F ++ +K M GC PD SY+ L+ C + A +L
Sbjct: 205 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 264
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++DK +++YNT+I G + G+ A E EM G++ +T+ + G CR
Sbjct: 265 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 324
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
++ AI + + G P +I LC +R A+D+ A ++ G P E
Sbjct: 325 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLF-AYMIGNGCMPNES 383
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGK-GFEPSLEIY---SAFIDGYMKEGNVEMATML 480
+Y LI+GL EG ++EA + E+ + G E L+++ AF+ ++ N L
Sbjct: 384 TYTILIEGLAYEGLIKEARDLLDELCSRAGEEILLDVHLIDVAFLTTFLPCSNANGGPFL 443
Query: 481 R 481
R
Sbjct: 444 R 444
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 119/243 (48%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N ++ G +E E++ EM + GC P+ ++++L++ C + + A ++
Sbjct: 135 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEV 194
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E++ + ++YN ++ FC+ +M +A F M G V++ L+ CR
Sbjct: 195 LEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 254
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G+VD A+ + + + KG P + +I L + EAL++L V K GL P
Sbjct: 255 SGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK-GLQPDII 313
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y + GLC E ++E+A++ ++ G P+ +Y+A I G K A L M
Sbjct: 314 TYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM 373
Query: 485 FEN 487
N
Sbjct: 374 IGN 376
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
+AYN ++ G+C G++ A EM VE + T+ L+ G C G +A+ V ++
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
M R+ P+ T +L+ C + +A+ +L K G P +Y ++ G+C+EG
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDK-GCTPDIVTYNVVVNGICQEG 116
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++++A++ + G EP+ Y+ + G E A L EM
Sbjct: 117 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 163
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 121/284 (42%), Gaps = 37/284 (13%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C ++ ++ +I L R L+ PA +V+ E PK C
Sbjct: 168 CPPNVVTFNMLISFLCRKGLVEPALEVL-------EQIPKYG-----------CTPNSLS 209
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
++ L+ + K ++K +D +++SRG + + N L+ + R V E+
Sbjct: 210 YNPLLHAFCKQKKMDKAMAFLD---LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH 266
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
++ KD P + ++N ++ G + G ++ ++ EM G +P
Sbjct: 267 QL------------KDKG----CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQP 310
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D +YS + A C E R+ +A + + +++D + + V YN II G C+ E A + F
Sbjct: 311 DIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLF 370
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
M +G + T+ L+ G G + A + +++C + E
Sbjct: 371 AYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGE 414
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 131/253 (51%), Gaps = 10/253 (3%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ PNV T+NAL+ F +EG F + +++ EM G P+ +Y+ ++ FC++ R+ A
Sbjct: 318 KISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 377
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
E ++ M K DV + T+I G+C + E EM G+ +++VT+ L++G
Sbjct: 378 EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHG 437
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK----- 416
+C GD+++A+ + M G P+ T L+ LCD ++ +AL++ KA
Sbjct: 438 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 497
Query: 417 -----FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
G+ P +Y LI GL EGK EA ++ EM +G P YS+ IDG K+
Sbjct: 498 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 557
Query: 472 GNVEMATMLRKEM 484
++ AT + M
Sbjct: 558 SRLDEATQMFVSM 570
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 155/313 (49%), Gaps = 28/313 (8%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+++ ++ R +S V T NALI + E+Y E+ GI
Sbjct: 310 LLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML------PRGI--------- 354
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN T+N+++ GF ++ + ED++ MA GC PD ++++ L+ +C +R+ +
Sbjct: 355 -IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM 413
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM + + + V YNT+I GFC +G++ A + ++M SGV VT L++G
Sbjct: 414 ELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 473
Query: 363 CRAGDVDSAILVYNDMCR-----------KGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
C G + A+ ++ M + G EP+ T +LI L ++ + EA + L
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE-LY 532
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ G+ P +Y +I GLC++ +++EA ++ M K F P++ ++ I+GY K
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKA 592
Query: 472 GNVEMATMLRKEM 484
G V+ L EM
Sbjct: 593 GRVDDGLELFCEM 605
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 134/259 (51%), Gaps = 1/259 (0%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
D+ + + + ++ + ++PNV ++A++ G ++G ++++EM G P+ +Y
Sbjct: 232 DTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTY 291
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ ++ FC R A++L +EM ++ + +VV YN +I F + G+ A E + EM
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G+ +++T+ +++G+C+ +D+A ++ M KG P+ T LI C +R+ +
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 411
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+++L + + GL +Y LI G C G + AL + +M+ G P + + +
Sbjct: 412 GMELLH-EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 470
Query: 466 DGYMKEGNVEMATMLRKEM 484
DG G ++ A + K M
Sbjct: 471 DGLCDNGKLKDALEMFKAM 489
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 124/240 (51%), Gaps = 9/240 (3%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATA 231
+ + +D+ + ++S G+ + TCN L+ + + E+++ + +D DA+
Sbjct: 441 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 500
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
V P+V T+N L+ G EG F + E+++ EM G PD +YS ++
Sbjct: 501 PFNG-------VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C++ R+ EA +++ M K+ +VV +NT+I G+C+ G + E F EMG G+ +
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
++ + L+ G+ + G+++ A+ ++ +M G P+ TI ++ K + A+ +L+
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 673
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 116/248 (46%), Gaps = 4/248 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P+V FN LM R + V ++ +M R D YS+++L+ FC ++ A
Sbjct: 76 RPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFA 135
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ ++ + DVV + T++ G C ++ A + F ++ V +TF L+NG
Sbjct: 136 LSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDV----LTFTTLMNG 191
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
CR G V A+ + + M G +P+ T + +C AL++L+ + P
Sbjct: 192 LCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKP 251
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y +I GLC++G+ ++ + EM KG P++ Y+ I G+ G A L
Sbjct: 252 NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLL 311
Query: 482 KEMFENQV 489
+EM E ++
Sbjct: 312 QEMLERKI 319
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 136/305 (44%), Gaps = 31/305 (10%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV------------ 222
++++ D+ ++ ++G S V T LI K + G E+ E+
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431
Query: 223 ------FGLDSDATAGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
F L D A + + + V P++ T N L+ G G + +++ M +
Sbjct: 432 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 491
Query: 276 L-----------GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
G EPD +Y++L+ E + EAE+L+EEM + + D + Y+++I
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G C+ + A + F MG + VTF L+NGYC+AG VD + ++ +M R+G
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 611
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
+ LI + ALDI + ++ G++P + ++ G + ++E A+
Sbjct: 612 ADAIIYITLIYGFRKVGNINGALDIFQ-EMISSGVYPDTITIRNMLTGFWSKEELERAVA 670
Query: 445 VQAEM 449
+ ++
Sbjct: 671 MLEDL 675
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 6/221 (2%)
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L G Y E D++ +M R P ++ LM R L+++M K
Sbjct: 52 LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ D+ ++ +I FC ++ A F ++ G+ VTF L++G C V A+
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+++ +CR P+ T L+ LC + RV EA+ +L R+V+ GL P + +Y + G
Sbjct: 172 DLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLD-RMVENGLQPDQITYGTFVDG 226
Query: 433 LCEEGKMEEALKVQAEMVG-KGFEPSLEIYSAFIDGYMKEG 472
+C+ G AL + +M +P++ IYSA IDG K+G
Sbjct: 227 MCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDG 267
>gi|326505288|dbj|BAK03031.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326529675|dbj|BAK04784.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 597
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 157/342 (45%), Gaps = 53/342 (15%)
Query: 182 DIVRM---LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK 238
D VR+ + + GL+ C AL+ ++R + + R VF D AG+
Sbjct: 127 DAVRVFDHMRAEGLAPDAHACTALLTSLARARMTATA----RRVF--DGMGRAGVAM--- 177
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
N H +NA++ + G + E + M G D +S++ +A++ +
Sbjct: 178 -------NTHVYNAMLHVCLKAGDAARAEALMTRMDATGVPLDLFSFNTAIALYVRKGMQ 230
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EA + + M + VE D+V +NT+I G C+ G M A + R+M +G+E +VT+ L
Sbjct: 231 YEAMCVRDRMANDGVEADIVTWNTVIHGMCKEGRMKEASQLHRDMVAAGIEPDTVTYTTL 290
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL-------- 410
V+GYCRAGDV A+ + M +G P +T +I +LC+ ++ E +L
Sbjct: 291 VDGYCRAGDVGEAMNLRAVMEARGMLPGVATYNAIIRKLCEDGKMKEVNGLLSEMDERKV 350
Query: 411 --------------------------KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
K R+++ GL + +Y LI G + +++EA +
Sbjct: 351 QADHVTCNTLINSYSKKGDMPSACKVKTRMMESGLQLDQFTYKALIHGFSKAKQLDEAKE 410
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
EM+G GF P+ ++S +DG+ K N + ++ E+ +
Sbjct: 411 ALFEMMGAGFSPNYSVFSWLVDGFYKRNNADAVLLIPDELMK 452
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 122/247 (49%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+ L+ G+ R G + ++ M G P +Y+ ++ CE+ +M+E
Sbjct: 280 IEPDTVTYTTLVDGYCRAGDVGEAMNLRAVMEARGMLPGVATYNAIIRKLCEDGKMKEVN 339
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EM ++ V+ D V NT+I + + G+M A + M SG++ T++ L++G+
Sbjct: 340 GLLSEMDERKVQADHVTCNTLINSYSKKGDMPSACKVKTRMMESGLQLDQFTYKALIHGF 399
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+A +D A +M GF P S L+ KR +A+ ++ ++K GL P
Sbjct: 400 SKAKQLDEAKEALFEMMGAGFSPNYSVFSWLVDGFY-KRNNADAVLLIPDELMKRGLPPD 458
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ Y LI+ LC++ ++ A KV +M GKG E +Y++ + G + A+
Sbjct: 459 KSVYRSLIRRLCKKRLVDLAQKVLHQMQGKGLEADCLVYASLAYAQLTAGKLAAASDTLN 518
Query: 483 EMFENQV 489
+M + Q+
Sbjct: 519 DMAKKQL 525
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 1/245 (0%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
H + L++ + G V+ M G PD ++ + L+ R A ++++
Sbjct: 110 HLPSWLLLALAQGGRAGDAVRVFDHMRAEGLAPDAHACTALLTSLARARMTATARRVFDG 169
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M V + YN ++ + G+ ARAE M +GV +F + Y R G
Sbjct: 170 MGRAGVAMNTHVYNAMLHVCLKAGDAARAEALMTRMDATGVPLDLFSFNTAIALYVRKGM 229
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
A+ V + M G E + T +I +C + R+ EA L +V G+ P +Y
Sbjct: 230 QYEAMCVRDRMANDGVEADIVTWNTVIHGMCKEGRMKEA-SQLHRDMVAAGIEPDTVTYT 288
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
L+ G C G + EA+ ++A M +G P + Y+A I ++G ++ L EM E
Sbjct: 289 TLVDGYCRAGDVGEAMNLRAVMEARGMLPGVATYNAIIRKLCEDGKMKEVNGLLSEMDER 348
Query: 488 QVRQE 492
+V+ +
Sbjct: 349 KVQAD 353
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 108/271 (39%), Gaps = 32/271 (11%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLL-- 164
+Y T++ RA +G A + +R + + P + + +++ E G V LL
Sbjct: 286 TYTTLVDGYCRAGDVGEAMN-LRAVMEARGMLPGVATYNAIIRKLCEDGKMKEVNGLLSE 344
Query: 165 ----------IKCCLEVKNIEK---IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
+ C + + K + + + +M GL + T ALI S+ K
Sbjct: 345 MDERKVQADHVTCNTLINSYSKKGDMPSACKVKTRMMESGLQLDQFTYKALIHGFSKAKQ 404
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
+ E E+ G AG PN F+ L+ GFY+ + V +
Sbjct: 405 LDEAKEALFEMMG------AGFS----------PNYSVFSWLVDGFYKRNNADAVLLIPD 448
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
E+ + G PD Y L+ C++R + A+K+ +M+ K +E D + Y ++ G
Sbjct: 449 ELMKRGLPPDKSVYRSLIRRLCKKRLVDLAQKVLHQMQGKGLEADCLVYASLAYAQLTAG 508
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++A A + +M + + + L Y
Sbjct: 509 KLAAASDTLNDMAKKQLSVTPQIYNCLCTSY 539
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 185/388 (47%), Gaps = 44/388 (11%)
Query: 122 GPARDVIRVALRSPEN--DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEK--- 176
G + + + R EN P + + +V G DLL K +E +N++
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK--MEERNVKADVF 229
Query: 177 --------------IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
I+ + + + + ++G+ V T N+L+ + + G + +++
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
V R + PNV TFN L+ F +EG ++ +++ EM G P+
Sbjct: 290 --------------VSR--EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+Y+ LM +C + R+ EA + + M D+V + ++I G+C + + + FR
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
+ G+ +++VT+ LV G+C++G + A ++ +M G P+ T +L+ LCD +
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 403 VFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+ +AL+I L+ + G+ Y +I+G+C+ GK+E+A + + KG +P++
Sbjct: 454 LEKALEIFEDLQKSKMDLGIV----MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFEN 487
Y+ I G K+G++ A +L ++M E+
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEED 537
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 1/224 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ TFN L+ G + EG + + M GC+PD +Y+ ++ C A L
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M ++NV+ DV Y+TII C G + A F+EM G++SS VT+ LV G C+
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG + L+ DM + P T VL+ + ++ EA ++ K + + G+ P
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNII 334
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+Y L+ G C + ++ EA + MV P + +++ I GY
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 79/150 (52%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
N T++ L+ GF + G + E+++ EM G PD +Y +L+ C+ ++ +A ++
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E+++ ++ +V Y TII G C+ G++ A F + GV+ + +T+ +++G C+
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
G + A ++ M G P T LI
Sbjct: 521 KGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 97/224 (43%), Gaps = 7/224 (3%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
++ EM R P +S + ++ +++ + H++ N +I FC
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ A ++ G E + TF L+ G G V A+++ + M G +P+
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194
Query: 389 TIEVLIGELCDKRRVFEALDILKA---RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
T ++ +C ALD+L+ R VK +F +Y +I LC +G ++ A+ +
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF----TYSTIIDSLCRDGCIDAAISL 250
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EM KG + S+ Y++ + G K G +L K+M ++
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 78/155 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+ L+ G G EK +++ ++ + + Y+ ++ C+ ++ +A
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ + K V+ +V+ Y +I G C+ G ++ A R+M G + T+ L+ +
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
R GD+ ++ + +M GF + S+I+++I L
Sbjct: 554 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 9/161 (5%)
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK----GFEPEGSTIE 391
A F+EM S S V F + R + + D C++ G T+
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVL----DFCKQLELNGIAHNIYTLN 127
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
++I C + A +L +V+K G P ++ LIKGL EGK+ EA+ + MV
Sbjct: 128 IMINCFCRCCKTCFAYSVL-GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
G +P + Y++ ++G + G+ +A L ++M E V+ +
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 172/390 (44%), Gaps = 44/390 (11%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRS---PENDPKLKLFEVLVKTYRECGSAPFV 160
L +Y++++H L +AR +G A +R + P+N + L+ Y G
Sbjct: 257 DLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDN----WTYNNLIYGYSSTG----- 307
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
+ + V + + + + V T N L+ + + + R
Sbjct: 308 ---------------QWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEA----R 348
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
+VF D A G++ P+V ++ ++ G+ +G + D++ M G P
Sbjct: 349 DVF----DTMAMKGQN--------PDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAP 396
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D Y++SVL+ + + +A ++ EMRD V+ DVV Y T+I C IG+M A E F
Sbjct: 397 DIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKF 456
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
+M GV + L+ G+C G + A + ++ G + +I LC
Sbjct: 457 NQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKL 516
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
R+ +A +I V G P Y L+ G C GKME+AL+V MV G EP++ +
Sbjct: 517 GRIMDAQNIFDL-TVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 575
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
Y ++GY K G ++ L +EM + ++
Sbjct: 576 YGTLVNGYCKIGRIDEGLSLFREMLQKGIK 605
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 127/250 (50%), Gaps = 3/250 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG--CEPDCYSYSVLMAVFCEERRMREAE 302
P+V +++ L+ +G + +D+ MA G C PD +Y+ ++ F +E + +A
Sbjct: 184 PDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKAC 243
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++EM + + D+V Y++++ C+ M +AE F R+M GV + T+ +L+ GY
Sbjct: 244 DLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGY 303
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G A+ V+ +M R P+ T+ +L+G LC ++ EA D+ +K G P
Sbjct: 304 SSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMK-GQNPD 362
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY ++ G +G + + + M+G G P + +S I Y G ++ A ++
Sbjct: 363 VFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFN 422
Query: 483 EMFENQVRQE 492
EM ++ V+ +
Sbjct: 423 EMRDHGVKPD 432
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 204/469 (43%), Gaps = 52/469 (11%)
Query: 30 SSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIAL----GLKNNP 85
+ P S + A V+L S+++ +LS PT + L + P
Sbjct: 79 ARAPSSAACGSGPALAVALFNRAASRAQGPRVLS-------PTSHTYAILMDCCTRAHRP 131
Query: 86 HLALRFFS------------FTQH--KSLCKHSLSSYATIIHILSRARLIGPARDVIR-- 129
LAL FF H K C+ + A I +L R +G DV
Sbjct: 132 ELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI-LLHRTPELGCVPDVFSYS 190
Query: 130 VALRSPENDPKLKLFEVLVKTYRECGS--APFV--FDLLIKCCLEVKNIEKIETCVDIVR 185
+ L+S + K + L++ E G+ +P V + +I C + ++ K D+ +
Sbjct: 191 ILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNK---ACDLFK 247
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
++ RG+ + T ++++ + + + + R++ + K V P
Sbjct: 248 EMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQM----------VNKGV------LP 291
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+ T+N L+ G+ G +++ V+ EM R PD + ++LM C+ +++EA ++
Sbjct: 292 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVF 351
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M K DV +Y ++ G+ G + + F M G+ TF L+ Y
Sbjct: 352 DTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANC 411
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G +D A++++N+M G +P+ T +I LC ++ +A++ +++ G+ P + +
Sbjct: 412 GMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFN-QMIDQGVAPDKYA 470
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
Y LI+G C G + +A ++ E++ G + +S+ I+ K G +
Sbjct: 471 YHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRI 519
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 121/249 (48%), Gaps = 5/249 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ + ++ L+ GF G+ K +++ +E+ G D +S ++ C+ R+ +A+
Sbjct: 464 VAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQ 523
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ + D V Y+ ++ G+C +G+M +A F M +G+E + V + LVNGY
Sbjct: 524 NIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGY 583
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G +D + ++ +M +KG +P ++I L R A + + + G+
Sbjct: 584 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPA-KVKFHEMTESGIAIN 642
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ +Y +++G + +EA+ + E+ + + + I G + VE A K
Sbjct: 643 KCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA----K 698
Query: 483 EMFENQVRQ 491
++F + R
Sbjct: 699 DLFASISRS 707
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 17/235 (7%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+M+ G+ + + +++I + + ++ I+ D T +G+ P+
Sbjct: 494 IMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIF--------DLTVNVGQ--------HPD 537
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
++ LM G+ G EK V+ M G EP+ Y L+ +C+ R+ E L+
Sbjct: 538 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFR 597
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
EM K ++ + YN II G G A+ F EM SG+ + T+ ++ G+ +
Sbjct: 598 EMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNR 657
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
D AI ++ ++ + + T+ +I + RRV EA D+ A + + GL P
Sbjct: 658 CFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF-ASISRSGLVP 711
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
R G + +S T+ L++ RA + A+ + + R G + L+ C+
Sbjct: 104 RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEA 163
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA---LKVQAEMVGKGFEPS 457
+R EALDIL R + G P SY L+K LC++GK +A L++ AE G P
Sbjct: 164 KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG-GAVCSPD 222
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ Y+ ID + KEG+V A L KEM + +
Sbjct: 223 VVAYTTVIDCFFKEGDVNKACDLFKEMVQRGI 254
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 95/237 (40%), Gaps = 39/237 (16%)
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI-------- 330
P ++Y++LM R A + ++ + D++ N ++ GFCE
Sbjct: 112 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALD 171
Query: 331 ----------------------------GEMARAEEFFREMGLSGVESSS--VTFEHLVN 360
G+ +A++ R M G S V + +++
Sbjct: 172 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVID 231
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
+ + GDV+ A ++ +M ++G P+ T ++ LC R + +A L+ V K G+
Sbjct: 232 CFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNK-GVL 290
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P +Y LI G G+ +EA++V EM P + + + K G ++ A
Sbjct: 291 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEA 347
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 57/112 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ +N ++ G + G + + EM G + +Y++++ F + R EA
Sbjct: 604 IKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAI 663
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
L++E+R NV+ D++ NT+I G + + A++ F + SG+ VT
Sbjct: 664 FLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 150/301 (49%), Gaps = 17/301 (5%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++++G+S + TCN+L++ + ++ V L ++ ++ PN
Sbjct: 240 MITKGISPNIVTCNSLVY-------ALCNLGEWKHVNTLLNEMVDS---------KIMPN 283
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ ++ +EG + DV M + G EPD +Y+ L+ C M EA K+++
Sbjct: 284 AISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFD 343
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M K +V +YNT+I G+C+I M +A F EM + ++VT+ L++G C G
Sbjct: 344 MMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVG 403
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
+ AI ++ +M G P+ T +L+ LC + +A+ +LKA + L P + Y
Sbjct: 404 RLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKA-IEGSNLDPDIQIY 462
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+I G+C G++E+A + + + KG +P++ Y+ G K G ++ AT L EM E
Sbjct: 463 TIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDE 522
Query: 487 N 487
N
Sbjct: 523 N 523
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 141/327 (43%), Gaps = 18/327 (5%)
Query: 158 PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
P + D K + +++ T + + R + S G+ V T N LI V +
Sbjct: 72 PSIVDF-AKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFS 130
Query: 218 IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
+ ++ L +P+ +F L+ G EG + ++ +M G
Sbjct: 131 VLAKILKLG----------------CQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
+PD Y+ L+ C+ A +L M N + DVV Y T+I C+ + +A
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
F EM G+ + VT LV C G+ + N+M P ++ ++ L
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDAL 294
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C + V +A D++ + + G+ P +Y LI G C +M+EA+KV MV KG P+
Sbjct: 295 CKEGMVAQAHDVVDM-MFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPN 353
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ Y+ I+GY K ++ A L +EM
Sbjct: 354 VFSYNTLINGYCKIERMDKAMYLFEEM 380
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+V + L+ G + G + M + C+PD Y L+ C++R+ +A
Sbjct: 176 QPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFN 235
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGE------------------------------- 332
L+ EM K + ++V N+++ C +GE
Sbjct: 236 LFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALC 295
Query: 333 ----MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+A+A + M SGVE VT+ L++G+C ++D A+ V++ M KG P
Sbjct: 296 KEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVF 355
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
+ LI C R+ +A+ + + + + L P +Y LI GLC G++++A+ + E
Sbjct: 356 SYNTLINGYCKIERMDKAMYLFE-EMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFRE 414
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
MV G P L Y +D K +++ A L K +
Sbjct: 415 MVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAI 450
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 1/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ F ++ + + V + +M G + Y+ +VL+ FC R+ A +
Sbjct: 72 PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ + D ++ T+I G C G++ A F +M G + V + L+NG C+
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +AI + M + +P+ LI LC R+ +A ++ + K G+ P
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITK-GISPNIV 250
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ L+ LC G+ + + EMV P+ + +D KEG V A + M
Sbjct: 251 TCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMM 310
Query: 485 FENQVRQE 492
F++ V +
Sbjct: 311 FQSGVEPD 318
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 143/337 (42%), Gaps = 41/337 (12%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
S T++ L + ++ A DV+ + +S +P + + L+ +
Sbjct: 286 SLTTVVDALCKEGMVAQAHDVVDMMFQSGV-EPDVVTYTALIDGH--------------- 329
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGY-EIYREVFGL 225
CL +++ V + M++ +G + V + N LI +GY +I R
Sbjct: 330 -CLR----SEMDEAVKVFDMMVHKGCAPNVFSYNTLI----------NGYCKIER----- 369
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
D + +++ R ++ PN T+N L+ G G + ++ EM G PD +Y
Sbjct: 370 -MDKAMYLFEEMCRQ-KLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTY 427
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+L+ C+ + +A L + + N++ D+ Y +I G C GE+ A + F +
Sbjct: 428 RILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSS 487
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G++ + T+ + +G C+ G +D A ++ +M +G T +
Sbjct: 488 KGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSR 547
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
A+ +L+ + + F + S L+ G+ + ++++
Sbjct: 548 AIQLLEEMLARG--FSCDVSTTTLLVGMLSDDGLDQS 582
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 131/253 (51%), Gaps = 10/253 (3%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ PNV T+NAL+ F +EG F + +++ EM G P+ +Y+ ++ FC++ R+ A
Sbjct: 318 KISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 377
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
E ++ M K DV + T+I G+C + E EM G+ +++VT+ L++G
Sbjct: 378 EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHG 437
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK----- 416
+C GD+++A+ + M G P+ T L+ LCD ++ +AL++ KA
Sbjct: 438 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 497
Query: 417 -----FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
G+ P +Y LI GL EGK EA ++ EM +G P YS+ IDG K+
Sbjct: 498 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 557
Query: 472 GNVEMATMLRKEM 484
++ AT + M
Sbjct: 558 SRLDEATQMFVSM 570
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 155/313 (49%), Gaps = 28/313 (8%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+++ ++ R +S V T NALI + E+Y E+ GI
Sbjct: 310 LLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML------PRGI--------- 354
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN T+N+++ GF ++ + ED++ MA GC PD ++++ L+ +C +R+ +
Sbjct: 355 -IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM 413
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM + + + V YNT+I GFC +G++ A + ++M SGV VT L++G
Sbjct: 414 ELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 473
Query: 363 CRAGDVDSAILVYNDMCR-----------KGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
C G + A+ ++ M + G EP+ T +LI L ++ + EA + L
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE-LY 532
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ G+ P +Y +I GLC++ +++EA ++ M K F P++ ++ I+GY K
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKA 592
Query: 472 GNVEMATMLRKEM 484
G V+ L EM
Sbjct: 593 GRVDDGLELFCEM 605
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 134/259 (51%), Gaps = 1/259 (0%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
D+ + + + ++ + ++PNV ++A++ G ++G ++++EM G P+ +Y
Sbjct: 232 DTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTY 291
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ ++ FC R A++L +EM ++ + +VV YN +I F + G+ A E + EM
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G+ +++T+ +++G+C+ +D+A ++ M KG P+ T LI C +R+ +
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 411
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+++L + + GL +Y LI G C G + AL + +M+ G P + + +
Sbjct: 412 GMELLH-EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 470
Query: 466 DGYMKEGNVEMATMLRKEM 484
DG G ++ A + K M
Sbjct: 471 DGLCDNGKLKDALEMFKAM 489
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 124/240 (51%), Gaps = 9/240 (3%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATA 231
+ + +D+ + ++S G+ + TCN L+ + + E+++ + +D DA+
Sbjct: 441 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 500
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
V P+V T+N L+ G EG F + E+++ EM G PD +YS ++
Sbjct: 501 PFNG-------VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C++ R+ EA +++ M K+ +VV +NT+I G+C+ G + E F EMG G+ +
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
++ + L+ G+ + G+++ A+ ++ +M G P+ TI ++ K + A+ +L+
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 673
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 116/248 (46%), Gaps = 4/248 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P+V FN LM R + V ++ +M R D YS+++L+ FC ++ A
Sbjct: 76 RPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFA 135
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ ++ + DVV + T++ G C ++ A + F ++ V +TF L+NG
Sbjct: 136 LSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDV----LTFTTLMNG 191
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
CR G V A+ + + M G +P+ T + +C AL++L+ + P
Sbjct: 192 LCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKP 251
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y +I GLC++G+ ++ + EM KG P++ Y+ I G+ G A L
Sbjct: 252 NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLL 311
Query: 482 KEMFENQV 489
+EM E ++
Sbjct: 312 QEMLERKI 319
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 136/305 (44%), Gaps = 31/305 (10%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV------------ 222
++++ D+ ++ ++G S V T LI K + G E+ E+
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431
Query: 223 ------FGLDSDATAGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
F L D A + + + V P++ T N L+ G G + +++ M +
Sbjct: 432 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 491
Query: 276 L-----------GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
G EPD +Y++L+ E + EAE+L+EEM + + D + Y+++I
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G C+ + A + F MG + VTF L+NGYC+AG VD + ++ +M R+G
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 611
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
+ LI + ALDI + ++ G++P + ++ G + ++E A+
Sbjct: 612 ADAIIYITLIYGFRKVGNINGALDIFQ-EMISSGVYPDTITIRNMLTGFWSKEELERAVA 670
Query: 445 VQAEM 449
+ ++
Sbjct: 671 MLEDL 675
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 6/221 (2%)
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L G Y E D++ +M R P ++ LM R L+++M K
Sbjct: 52 LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ D+ ++ +I FC ++ A F ++ G+ VTF L++G C V A+
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+++ +CR P+ T L+ LC + RV EA+ +L R+V+ GL P + +Y + G
Sbjct: 172 DLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLD-RMVENGLQPDQITYGTFVDG 226
Query: 433 LCEEGKMEEALKVQAEMVG-KGFEPSLEIYSAFIDGYMKEG 472
+C+ G AL + +M +P++ IYSA IDG K+G
Sbjct: 227 MCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDG 267
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV TFN L+ G+ + G + +++ EM R G D Y L+ F + + A +
Sbjct: 577 PNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDI 636
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++EM V D + ++ GF E+ RA ++ +S
Sbjct: 637 FQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMS 678
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 126/242 (52%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ +T+N L+ G G V EM R C PD +Y++L+ C+ ++A
Sbjct: 154 VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 213
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL +EMRDK D+V YN ++ G C+ G + A EF + + G E ++V++ ++ G
Sbjct: 214 KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 273
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C A + A + +M +KG P T +LI LC K V AL++L+ ++ K+G P
Sbjct: 274 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE-QIPKYGCTPN 332
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY L+ C++ KM++A+ MV +G P + Y+ + + G V++A L
Sbjct: 333 SLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH 392
Query: 483 EM 484
++
Sbjct: 393 QL 394
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 124/245 (50%), Gaps = 1/245 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV TFN L+ R+G E +V ++ + GC P+ SY+ L+ FC++++M +A
Sbjct: 296 PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAF 355
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + D+V+YNT++ C GE+ A E ++ G +++ +++G +
Sbjct: 356 LDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTK 415
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG A+ + N+M KG +P+ T + LC + R+ +A+ +V G+ P
Sbjct: 416 AGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF-GKVQDMGIRPNTV 474
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y +I GLC+ + A+ + A M+G G P+ Y+ I+G EG ++ A L E+
Sbjct: 475 LYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 534
Query: 485 FENQV 489
V
Sbjct: 535 CSRGV 539
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 133/269 (49%), Gaps = 3/269 (1%)
Query: 224 GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
G ++A A + + ++R R P+V T+ L+ + +++ + EM GC PD
Sbjct: 172 GRTANALAVLDEMLRR--RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIV 229
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+Y+V++ C+E R+ +A + + + E + V+YN ++ G C AEE EM
Sbjct: 230 TYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 289
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G G + VTF L++ CR G V+ A+ V + + G P + L+ C ++++
Sbjct: 290 GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKM 349
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
+A+ L V + G +P SY L+ LC G+++ A+++ ++ KG P L Y+
Sbjct: 350 DKAMAFLDLMVSR-GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 408
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQVRQE 492
IDG K G + A L EM ++ +
Sbjct: 409 VIDGLTKAGKTKEALELLNEMVSKGLQPD 437
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 119/243 (48%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N ++ G +E E++ EM + GC P+ ++++L++ C + + A ++
Sbjct: 261 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEV 320
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E++ + ++YN ++ FC+ +M +A F M G V++ L+ CR
Sbjct: 321 LEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 380
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G+VD A+ + + + KG P + +I L + EAL++L V K GL P
Sbjct: 381 SGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK-GLQPDII 439
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y + GLC E ++E+A++ ++ G P+ +Y+A I G K A L M
Sbjct: 440 TYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM 499
Query: 485 FEN 487
N
Sbjct: 500 IGN 502
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C ++ ++ +I L R L+ PA +V+ E PK C
Sbjct: 294 CPPNVVTFNMLISFLCRKGLVEPALEVL-------EQIPKYG-----------CTPNSLS 335
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
++ L+ + K ++K +D +++SRG + + N L+ + R V E+
Sbjct: 336 YNPLLHAFCKQKKMDKAMAFLD---LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH 392
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
++ KD P + ++N ++ G + G ++ ++ EM G +P
Sbjct: 393 QL------------KDKG----CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQP 436
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D +YS + A C E R+ +A + + +++D + + V YN II G C+ E A + F
Sbjct: 437 DIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLF 496
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
M +G + T+ L+ G G + A + +++C +G
Sbjct: 497 AYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 538
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 56/147 (38%), Gaps = 30/147 (20%)
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFEA----------- 406
R G++D A+ + R P+ T LI G + RRV A
Sbjct: 77 RRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAM 132
Query: 407 ---------LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
LD + V + + P +Y LI+GLC G+ AL V EM+ + P
Sbjct: 133 VAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPD 192
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ Y+ ++ K + A L EM
Sbjct: 193 VVTYTILLEATCKRSGYKQAMKLLDEM 219
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 129/247 (52%), Gaps = 1/247 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPNV +N ++ G ++ + D++ EM G PD +Y+ L+ FC ++ A
Sbjct: 147 RPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFS 206
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +EM KN+ V YN +I C+ G + A+ M G++ VT+ L++GYC
Sbjct: 207 LLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYC 266
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G+V +A +++ M + G P + ++I LC +RV EA+++L+ + K + P
Sbjct: 267 LVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHK-NMVPDT 325
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI GLC+ G++ AL + EM +G + Y++ +D K N++ AT L +
Sbjct: 326 VTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMK 385
Query: 484 MFENQVR 490
M E ++
Sbjct: 386 MKERGIQ 392
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 124/243 (51%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P V T++ LM G+ G + + ++ M ++G P+ YSY++++ C+ +R+ EA
Sbjct: 251 IKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAM 310
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EM KN+ D V YN++I G C+ G + A EM G + VT+ L++
Sbjct: 311 NLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDAL 370
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ ++D A ++ M +G +P T LI LC R+ A ++ + +VK G
Sbjct: 371 CKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVK-GCCID 429
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I GLC+EG +EAL ++++M G P+ + I ++ + A L
Sbjct: 430 VWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLH 489
Query: 483 EMF 485
EM
Sbjct: 490 EMI 492
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 151/341 (44%), Gaps = 50/341 (14%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
V ++RM+ R V N +I + + K V Y++Y E+ DA
Sbjct: 135 VKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM-----DARG--------- 180
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ P+ T+ L+ GF G + EM P Y Y++L+ C+E ++E
Sbjct: 181 --IFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKE 238
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A+ L M + ++ VV Y+T++ G+C +GE+ A++ F M GV + ++ ++N
Sbjct: 239 AKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMIN 298
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK--------A 412
G C+ VD A+ + +M K P+ T LI LC R+ AL+++ A
Sbjct: 299 GLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPA 358
Query: 413 RVVKF--------------------------GLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
VV + G+ PT +Y LI GLC+ G+++ A ++
Sbjct: 359 DVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELF 418
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++ KG + Y+ I G KEG + A ++ +M +N
Sbjct: 419 QHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDN 459
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 121/248 (48%), Gaps = 5/248 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+R N T N L+ F G V ++ +LG +PD + + LM C + ++++
Sbjct: 41 IRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSL 100
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ + + D V+Y T++ G C+IGE A + R + + V + +++G
Sbjct: 101 HFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGL 160
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ V+ A +Y++M +G P+ T LI C ++ A +L ++K + P
Sbjct: 161 CKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILK-NINPG 219
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y LI LC+EG ++EA + A M +G +P + YS +DGY G V+ A K
Sbjct: 220 VYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNA----K 275
Query: 483 EMFENQVR 490
++F V+
Sbjct: 276 QIFHAMVQ 283
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 1/251 (0%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
+VR P + FN ++ + + + +M G + + ++L+ FC +M
Sbjct: 3 LVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMA 62
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+ + ++ + D + NT++ G C GE+ ++ F ++ G + V++ L+
Sbjct: 63 FSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLL 122
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
NG C+ G+ A+ + + + P +I LC + V EA D L + + G+
Sbjct: 123 NGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYD-LYSEMDARGI 181
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
FP +Y LI G C G++ A + EM+ K P + IY+ I+ KEGNV+ A
Sbjct: 182 FPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKN 241
Query: 480 LRKEMFENQVR 490
L M + ++
Sbjct: 242 LLAVMTKEGIK 252
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 129/281 (45%), Gaps = 21/281 (7%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ +++ I ++ G++ V + N +I + + K V + RE+
Sbjct: 268 VGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLH--------- 318
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
K +V P+ T+N+L+ G + G ++ EM G D +Y+ L+ C
Sbjct: 319 ----KNMV---PDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALC 371
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + + +A L+ +M+++ ++ + Y +I G C+ G + A+E F+ + + G
Sbjct: 372 KNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVW 431
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ +++G C+ G D A+ + + M G P T E++I L +K +A +L
Sbjct: 432 TYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 491
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+ K GL + F + + + + ++A K+ EM+ KG
Sbjct: 492 IAK-GLLVLD----FKVADVFVQNENDKAEKLLHEMIAKGL 527
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 149/314 (47%), Gaps = 8/314 (2%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
+I + C ++R G + K + I E+ G + Y + G +
Sbjct: 137 DIPDVIACTSLIRGFCRSGKTKKATR----IMEILENSGAVPDVITYNVLIG-GYCKSGE 191
Query: 233 IGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
I K ++ + R V P+V T+N ++ G ++ +V + C PD +Y++L+
Sbjct: 192 IDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIE 251
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C + + +A KL +EMR K + DVV YN +I G C+ G + A +F M G +
Sbjct: 252 ATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKP 311
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ +T ++ C G A + +DM RKG P T +LI LC KR + A+D+L
Sbjct: 312 NVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVL 371
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ ++ K G P SY L+ G C+E KM+ A++ MV +G P + Y+ + K
Sbjct: 372 E-KMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCK 430
Query: 471 EGNVEMATMLRKEM 484
+G V+ A + ++
Sbjct: 431 DGKVDAAVEILNQL 444
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 1/223 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN L+ R+ + DV +M + GC P+ SY+ L+ FC+E++M A +
Sbjct: 346 PSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEY 405
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M + D+V YNT++ C+ G++ A E ++ G +T+ +++G +
Sbjct: 406 LEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTK 465
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A+ + +M RKG +P+ T L+ L + +V EA+ I + + P+
Sbjct: 466 VGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHD-MEGLSIKPSAV 524
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+Y ++ GLC+ + A+ A MV KG +P+ Y+ I+G
Sbjct: 525 TYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 113/210 (53%), Gaps = 1/210 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N L+ GF +E ++ + M GC PD +Y+ L+ C++ ++ A ++
Sbjct: 381 PNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEI 440
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ K ++ YNT+I G ++G+ A E EM G++ +T+ L+ G R
Sbjct: 441 LNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGR 500
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G VD AI +++DM +P T ++ LC ++ A+D L A +V+ G PTE
Sbjct: 501 EGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFL-AYMVEKGCKPTEA 559
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+Y LI+G+ +EG EEAL++ E+ +GF
Sbjct: 560 TYTILIEGIADEGLAEEALELLNELCSRGF 589
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ E K E M + DV+A ++I GFC G+ +A + SG +T+
Sbjct: 122 LEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNV 181
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L+ GYC++G++D A+ V R P+ T ++ LCD ++ EA+++L R ++
Sbjct: 182 LIGGYCKSGEIDKALEVLE---RMSVAPDVVTYNTILRSLCDSGKLKEAMEVLD-RQLQR 237
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+P +Y LI+ C + + +A+K+ EM KG +P + Y+ I+G KEG ++ A
Sbjct: 238 ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEA 297
Query: 478 TMLRKEM 484
M
Sbjct: 298 IKFLNNM 304
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 4/229 (1%)
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
R G E+ M G PD + + L+ FC + ++A ++ E + + D
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
V+ YN +IGG+C+ GE+ +A E M V VT+ ++ C +G + A+ V +
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLD 232
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
++ P+ T +LI C+ V +A+ +L + K G P +Y LI G+C+E
Sbjct: 233 RQLQRECYPDVITYTILIEATCNDSGVGQAMKLLD-EMRKKGCKPDVVTYNVLINGICKE 291
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
G+++EA+K M G +P++ ++ + G A L +M
Sbjct: 292 GRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDML 340
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 39/295 (13%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C S+ ++ +I+ L R RL+G A DV+ E PK C
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVL-------EKMPK-----------HGCVPNSLS 385
Query: 161 FD-LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
++ LL C E +K++ ++ + +++SRG + T N L+ + + V + EI
Sbjct: 386 YNPLLHGFCQE----KKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEIL 441
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
+ L S + P + T+N ++ G + G E ++ EM R G +
Sbjct: 442 NQ---LSSKGCS-------------PVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLK 485
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +YS L+ E ++ EA K++ +M +++ V YN I+ G C+ + +RA +F
Sbjct: 486 PDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDF 545
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
M G + + T+ L+ G G + A+ + N++C +GF + S +V++
Sbjct: 546 LAYMVEKGCKPTEATYTILIEGIADEGLAEEALELLNELCSRGFVKKSSAEQVVV 600
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 154/310 (49%), Gaps = 17/310 (5%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+E+ +D VR L+S V V NA+I G+ E+ + L+ + GI
Sbjct: 306 VESALDFVRSLISANGLVNVYCYNAII------HGLCKKGELDEALKVLEEMKSCGIS-- 357
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
P+V+T++ L+ GF ++G EK + EM EP SYS L C++R
Sbjct: 358 --------PDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKR 409
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ ++ ++ ++D AY+ +I GFC G++ A + EM + + FE
Sbjct: 410 LSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFE 469
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
LV+G+C+ G +A+ +N M G P +T V+I C + RV EAL+++ +
Sbjct: 470 SLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQ 529
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G+FP +Y +I LC+E K E AL++ M+ + PS+ +YS IDG+ K+ N +
Sbjct: 530 -GIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQK 588
Query: 477 ATMLRKEMFE 486
A ML M +
Sbjct: 589 ALMLYARMLK 598
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 127/244 (52%), Gaps = 1/244 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV+ +NA++ G ++G ++ V EM G PD Y+YS+L+ FC++ + + L
Sbjct: 324 NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLI 383
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EEM+ N+E +V+Y+++ G C+ + + FR++G +G + + L+ G+C
Sbjct: 384 EEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQ 443
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
GD+DSA + +M R P+ S E L+ C AL+ +++ G+ P+ +
Sbjct: 444 GDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNM-MLEGGILPSIAT 502
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+I C EG++EEAL + EM +G P+L Y+A I+ KE E A L M
Sbjct: 503 CNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLML 562
Query: 486 ENQV 489
+ V
Sbjct: 563 KRNV 566
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 169/390 (43%), Gaps = 30/390 (7%)
Query: 92 FSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR--VALRSPENDPKLKLFEVLVK 149
FS T K S+ ++ T++++L+ A + ++R V + N +LF +L++
Sbjct: 111 FSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFELFPILLE 170
Query: 150 TYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG 209
+ ++ + VFDLLIK +E VD+ GL + +CN L+ ++
Sbjct: 171 SPKDAARSVIVFDLLIKV---FAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEA 227
Query: 210 KGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF------ 263
+ E R +F + G PNV T+ +M+ FY +G F
Sbjct: 228 ----NRREFLRSLF----EEMKSTGPP--------PNVFTY-TIMMNFYCKGNFGEADID 270
Query: 264 -EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
+ ++ EM R G P +YS + C + A + N +V YN
Sbjct: 271 TRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNA 330
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
II G C+ GE+ A + EM G+ T+ L++G+C+ GDV+ + + +M
Sbjct: 331 IIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSN 390
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
EP + L LC KR +LDI + + G + +Y LIKG C +G ++ A
Sbjct: 391 MEPSLVSYSSLFHGLCKKRLSDISLDIFRD-LGAAGYKYDQTAYSILIKGFCMQGDLDSA 449
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
K+ EMV P + + + G+ K G
Sbjct: 450 HKLMEEMVRNNLAPDPSNFESLVHGFCKMG 479
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 138/273 (50%), Gaps = 4/273 (1%)
Query: 214 SGYEIYREVFGLDSDATAGIGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWV 271
+ Y I + F + D + K ++ +VR + P+ F +L+ GF + G + + +
Sbjct: 431 TAYSILIKGFCMQGDLDSA-HKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFN 489
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
M G P + +V++ C E R+ EA L EM+ + + ++ YN +I C+
Sbjct: 490 MMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKER 549
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ RA E F M V S V + L++G+ + + A+++Y M + G P+
Sbjct: 550 KSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYT 609
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+LI LC + R+ EA ++ K ++ + G+ P + SY +I G C G M +A + EM+
Sbjct: 610 ILINILCHRSRMCEAYNLFK-KMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQ 668
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+G P++ Y++ +DGY K +++A ML EM
Sbjct: 669 RGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEM 701
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 106/187 (56%), Gaps = 1/187 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V ++ L+ GF ++ +K ++ M ++G PD +Y++L+ + C RM EA
Sbjct: 566 VLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAY 625
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+++M + + D ++Y ++I GFC IG+M +A F EM G + VT+ LV+GY
Sbjct: 626 NLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGY 685
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ +D A ++ ++M RKG P+ T VLI + + +AL++L + + G+ P
Sbjct: 686 CKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLN-EMKENGVLPD 744
Query: 423 EKSYMFL 429
+YM L
Sbjct: 745 HMTYMML 751
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 117/250 (46%), Gaps = 7/250 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T N ++ REG E+ ++ EM G P+ ++Y+ ++ C+ER+ A
Sbjct: 496 ILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERAL 555
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ M +NV VV Y+T+I GF + +A + M GV V + L+N
Sbjct: 556 ELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINIL 615
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGL 419
C + A ++ M G P+ + +I C D R+ + + + R G
Sbjct: 616 CHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQR----GH 671
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
PT +Y L+ G C+ +++ A + EM KG P + Y+ I + + GN++ A
Sbjct: 672 LPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALE 731
Query: 480 LRKEMFENQV 489
+ EM EN V
Sbjct: 732 MLNEMKENGV 741
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 83/218 (38%), Gaps = 48/218 (22%)
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
K+ V+ ++ +I F + A + F + +G+E S+ + L+ A +
Sbjct: 173 KDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREF 232
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELC---------DKRRVFEALDILKARVVKFGLFP 421
++ +M G P T +++ C D R+ E L+ ++ + G P
Sbjct: 233 LRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEME----RNGESP 288
Query: 422 TEKSYMFLIKGLCEEG-----------------------------------KMEEALKVQ 446
T +Y I GLC G +++EALKV
Sbjct: 289 TVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVL 348
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
EM G P + YS I G+ K+G+VE L +EM
Sbjct: 349 EEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEM 386
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 129/240 (53%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +T+NALM G+ ++ + V M GC P +SY++L+ +C+ RR+ EA+ L
Sbjct: 335 PNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSL 394
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM +K + D V Y+T++ G C++G A F+EM SG+ +T+ L++G C+
Sbjct: 395 LVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCK 454
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +D A+ + M EP+ +LI + ++ E L +++ G+ PT +
Sbjct: 455 HGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKL-EVAKELFSKLFADGIQPTIR 513
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +IKGL +EG +EA ++ +M GF P+ Y+ I G+++ + A L EM
Sbjct: 514 TYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEM 573
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 167/372 (44%), Gaps = 55/372 (14%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATA- 231
++ T V + + G++ V + N LI + R V+ + ++F G+ DA
Sbjct: 106 KQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITF 165
Query: 232 -------GIGKDVKRVVRV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
I ++K V + +P+V +++ ++ G + G + +M
Sbjct: 166 NTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEE 225
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
GC+P+ +Y+ ++ C++ + +A L EM D+ + DVV Y+TI+ GFC +G +
Sbjct: 226 KGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNE 285
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST------ 389
A F EM V ++VTF LV+G C+ G V A V+ M +KG EP T
Sbjct: 286 ATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMD 345
Query: 390 -----------------------------IEVLIGELCDKRRVFEALDILKARVVKFGLF 420
+LI C +RR+ EA +L + + L
Sbjct: 346 GYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLL-VEMSEKELT 404
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y L++GLC+ G+ +EAL + EM G P L YS +DG K G+++ A L
Sbjct: 405 PDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKL 464
Query: 481 RKEMFENQVRQE 492
K M E+++ +
Sbjct: 465 LKSMQESKIEPD 476
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 127/243 (52%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
V PN TF L+ G +EG + V+ M + G EP+ Y+Y+ LM +C +M EA
Sbjct: 297 NVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEA 356
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+K+ + M DK V +YN +I G+C+ + A+ EM + +VT+ L+ G
Sbjct: 357 QKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQG 416
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G A+ ++ +MC G P+ T L+ LC + EAL +LK+ + + + P
Sbjct: 417 LCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKS-MQESKIEP 475
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y LI+G+ GK+E A ++ +++ G +P++ Y+ I G +KEG + A L
Sbjct: 476 DIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELF 535
Query: 482 KEM 484
++M
Sbjct: 536 RKM 538
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 124/248 (50%), Gaps = 1/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V T++ ++ GF G + ++ EM P+ ++++L+ C+E + EA
Sbjct: 263 IPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEAR 322
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++E M K E + YN ++ G+C +M A++ M G ++ L+NGY
Sbjct: 323 CVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGY 382
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ +D A + +M K P+ T L+ LC R EAL++ K + GL P
Sbjct: 383 CKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFK-EMCSSGLLPD 441
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ GLC+ G ++EALK+ M EP + +Y+ I+G G +E+A L
Sbjct: 442 LMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFS 501
Query: 483 EMFENQVR 490
++F + ++
Sbjct: 502 KLFADGIQ 509
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 117/241 (48%), Gaps = 3/241 (1%)
Query: 239 RVVRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
R++R+ RP+V F + ++ + V + +M G + YS ++L+ C
Sbjct: 82 RMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLN 141
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ A + +M ++ D + +NT+I G C GE+ A F EM G + +++
Sbjct: 142 HVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYS 201
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
++NG C++G+ A+ + M KG +P +I LC V +A+D+L + +V
Sbjct: 202 TVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLL-SEMVD 260
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G+ P +Y ++ G C G + EA + EMVG+ P+ ++ +DG KEG V
Sbjct: 261 RGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSE 320
Query: 477 A 477
A
Sbjct: 321 A 321
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+ M R+ P + + ++++ L +M V H+V + N +I C
Sbjct: 80 FYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCR 139
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
+ + A +M G++ ++TF L+NG C G++ A+ ++N+M R+G +P+ +
Sbjct: 140 LNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVIS 199
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
+I LC AL +L+ ++ + G P +Y +I LC++ + +A+ + +EM
Sbjct: 200 YSTVINGLCKSGNTSMALQLLR-KMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEM 258
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
V +G P + YS + G+ G++ AT+L EM V
Sbjct: 259 VDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNV 298
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 74/150 (49%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T++ L+ G + G ++ + M EPD Y++L+ ++ A++L
Sbjct: 440 PDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKEL 499
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ ++ ++ + Y +I G + G A E FR+M G +S ++ ++ G+ +
Sbjct: 500 FSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQ 559
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
D +AI + ++M K F + ST ++L+
Sbjct: 560 NQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 60/119 (50%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P++ +N L+ G + G E ++++ ++ G +P +Y++++ +E EA
Sbjct: 472 KIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEA 531
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+L+ +M D + +YN II GF + + + A EM + S TF+ L++
Sbjct: 532 YELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 127/247 (51%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN+ TFN + G R+GA ++ + + G PD SY+ L+ FC+ ++ EAE
Sbjct: 247 VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAE 306
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+M + VE + YNTII GFC+ G M A++ R+ G T+ L+NG
Sbjct: 307 CYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGL 366
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C GD++ A+ V+ + KGF+ L+ L + V +AL ++K +++ G P
Sbjct: 367 CNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMK-DMMEHGCSPD 425
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y ++ GLC+ G + +A + + + KG P + ++ IDGY K+ N++ A +
Sbjct: 426 IWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILD 485
Query: 483 EMFENQV 489
M + +
Sbjct: 486 TMLSHGI 492
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 118/237 (49%), Gaps = 4/237 (1%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N L+ G ++G + + +M GC PD ++Y++++ C+ + +A + +
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI 453
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K D+ +NT+I G+C+ M +A E M G+ +T+ L+NG C+A +D
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLD 513
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+ + + M KG P T +LI C R+V EA+++ K + GL P + L
Sbjct: 514 NVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR-GLTPDIVTLCTL 572
Query: 430 IKGLCEEGKMEEA--LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
I GLC G++++A L V E K F S I++ I+ + + NV MA L +M
Sbjct: 573 ICGLCSNGELDKAYELFVTIEKEYK-FSYSTAIFNIMINAFCXKLNVSMAEKLFHKM 628
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 36/270 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN T+N ++ GF + G + + + + G PD ++YS L+ C + M A
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-----------------GL 345
++ E +K +H ++ YNT++ G + G + +A + ++M GL
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436
Query: 346 ---------SGVESSSV---------TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
+G+ + ++ TF L++GYC+ ++D AI + + M G P+
Sbjct: 437 CKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDV 496
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T L+ LC R++ +D KA + K G P +Y LI+ C++ K+ EA+++
Sbjct: 497 ITYNTLLNGLCKARKLDNVVDTFKAMLEK-GCTPNIITYNILIESFCKDRKVSEAMELFK 555
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
EM +G P + I G G ++ A
Sbjct: 556 EMKTRGLTPDIVTLCTLICGLCSNGELDKA 585
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 178/405 (43%), Gaps = 51/405 (12%)
Query: 68 GLTPTQFSQIAL--GLKNNPHL--ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGP 123
G P +F+ +L GL N+ + A+ F K KHS+ Y T++ LS+ L+
Sbjct: 351 GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF-KHSIILYNTLVKGLSKQGLVLQ 409
Query: 124 ARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDI 183
A +++ + P + + ++V + G CL N I
Sbjct: 410 ALQLMKDMMEHG-CSPDIWTYNLVVNGLCKMG------------CLSDAN--------GI 448
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRV 243
+ +++G + T N LI + + + EI LD+ + GI
Sbjct: 449 LNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEI------LDTMLSHGI---------- 492
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
P+V T+N L+ G + + V D + M GC P+ +Y++L+ FC++R++ EA +
Sbjct: 493 TPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAME 552
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF----REMGLSGVESSSVTFEHLV 359
L++EM+ + + D+V T+I G C GE+ +A E F +E S S+ F ++
Sbjct: 553 LFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFS---YSTAIFNIMI 609
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
N +C +V A +++ M P+ T V+I C + A L + K GL
Sbjct: 610 NAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK-GL 668
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
P+ + ++ LC ++ EA+ + MV G P E+ S F
Sbjct: 669 VPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE-EVNSIF 712
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 112/233 (48%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N ++ G + G + + GC PD ++++ L+ +C++R M +A ++
Sbjct: 424 PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEI 483
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + DV+ YNT++ G C+ ++ + F+ M G + +T+ L+ +C+
Sbjct: 484 LDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCK 543
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
V A+ ++ +M +G P+ T+ LI LC + +A ++ ++ +
Sbjct: 544 DRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTA 603
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ +I C + + A K+ +M G P Y ID Y K GN+++A
Sbjct: 604 IFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLA 656
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 114/232 (49%), Gaps = 2/232 (0%)
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
+M + R+G ++ +V+ M CEP SY+ +M + E +A K++ M+D
Sbjct: 81 GIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI 140
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
+ DV + + FC G A M G E ++V++ +++G+ + A
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEA 200
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
++++M ++G P+ T LI LC K V E+ + L ++V+K G+ P ++ I+
Sbjct: 201 YHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQES-EKLFSKVMKRGVCPNLFTFNIFIQ 259
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN-VEMATMLRK 482
GLC +G ++EA ++ +V +G P + Y+ I G+ K VE L K
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHK 311
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 196/446 (43%), Gaps = 78/446 (17%)
Query: 81 LKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND-- 138
L N+ + A F+ K C+ + SY +IH L +G + I + + E+D
Sbjct: 16 LNNDVNSAFSVFNMMPKKG-CRRNEVSYTNLIHGLCE---VGRVDEGINIFKKMREDDCY 71
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
P ++ + V+V E G + +E I ++ + RG + T
Sbjct: 72 PTVRTYTVIVHALFESG----------------RRMEAI----NLFSEMRERGCEPNIHT 111
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
+I + + + G I LD G+ P+V T+NAL+ G+
Sbjct: 112 YTVMINAMCKETKLEEGRRI------LDEMVEKGL----------VPSVPTYNALIDGYC 155
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+EG E +++ M C P+ +Y+ L+ FC ++ + A L +M + + VV
Sbjct: 156 KEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVV 215
Query: 319 AYNTIIGGFCEIGEM--------------------------------ARAEE---FFREM 343
YN++I G C+IG + R EE F +
Sbjct: 216 TYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSL 275
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G++++ V + L++GYC+AG +D A + + M + P ST LI LC +R+V
Sbjct: 276 KEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKV 335
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
EAL ++++ + K GL T +Y LI + +EG + A ++ +MV G++P + IY+A
Sbjct: 336 QEALLLMESMIQK-GLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTA 394
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQV 489
FI + GN++ A + MFE V
Sbjct: 395 FIHAFCTRGNIKEAEDMMSMMFERGV 420
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 124/246 (50%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+HT+ ++ +E E+ + EM G P +Y+ L+ +C+E + A+++
Sbjct: 107 PNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEI 166
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + + YN +I GFC + RA +M S + S VT+ L++G C+
Sbjct: 167 LDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCK 226
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +DSA + N M G P+ T V I LC K R+ EA ++L + + G+ E
Sbjct: 227 IGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEA-NVLFNSLKEKGIKANEV 285
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G C+ GKM++A + M+ + P+ Y+A IDG KE V+ A +L + M
Sbjct: 286 IYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESM 345
Query: 485 FENQVR 490
+ ++
Sbjct: 346 IQKGLK 351
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 120/250 (48%), Gaps = 1/250 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
R N ++ L+ G G ++ +++ +M C P +Y+V++ E R EA
Sbjct: 36 RRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAIN 95
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+ EMR++ E ++ Y +I C+ ++ EM G+ S T+ L++GYC
Sbjct: 96 LFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYC 155
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G V++A + + M P T LI C K+ V A+ +L +++++ L P+
Sbjct: 156 KEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALL-SKMLESRLTPSV 214
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI G C+ G ++ A ++ M G P YS FID K+G +E A +L
Sbjct: 215 VTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNS 274
Query: 484 MFENQVRQED 493
+ E ++ +
Sbjct: 275 LKEKGIKANE 284
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 28/250 (11%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+NAL+ G +E ++ + M + G + +Y++L+ +E A ++
Sbjct: 317 PNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRI 376
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M + DV Y I FC G + AE+ M GV ++T+ +++ Y
Sbjct: 377 LDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGG 436
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE--------------LCD----------- 399
G ++ A V M G +P T LI LCD
Sbjct: 437 LGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVA 496
Query: 400 ---KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
K FE L ++++ G P +Y LI GLC+ G++ A K+ M +G P
Sbjct: 497 DVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSP 556
Query: 457 SLEIYSAFID 466
S IY++ ++
Sbjct: 557 SEAIYNSLLN 566
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 113/273 (41%), Gaps = 30/273 (10%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ V T+ L+V +EG F+ + +M G +PD Y Y+ + FC ++EAE
Sbjct: 350 LKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAE 409
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF------- 355
+ M ++ V D + Y +I + +G + A + + M +G + S T+
Sbjct: 410 DMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL 469
Query: 356 --EHLVNGYCRAGDVDS--------------------AILVYNDMCRKGFEPEGSTIEVL 393
E L Y DS A+ ++ M G P +T L
Sbjct: 470 LKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKL 529
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
I LC R+ A + + + G+ P+E Y L+ CE G +A+++ M+ G
Sbjct: 530 IIGLCKVGRLGVAQKLFD-HMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHG 588
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
P LE + G +EG+ E A ++ + +
Sbjct: 589 HLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQ 621
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 76/173 (43%), Gaps = 43/173 (24%)
Query: 358 LVNGYCRAG---------DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+VNGYC+ G DV+SA V+N M +KG + LI LC+ RV E ++
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 409 ILKA-------------RVVKFGLF---------------------PTEKSYMFLIKGLC 434
I K V+ LF P +Y +I +C
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+E K+EE ++ EMV KG PS+ Y+A IDGY KEG VE A + M N
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSN 173
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 13/233 (5%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ T+ ++ + G DV M GC+P ++YS L+ +E +
Sbjct: 420 VMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTK--- 476
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE---EFFREMGLSGVESSSVTFEHLV 359
+ KNV N ++ +M + E E F +M G + T+ L+
Sbjct: 477 ------KYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLI 530
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
G C+ G + A +++ M +G P + L+ C+ +A+ ++ A +++ G
Sbjct: 531 IGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGA-MMEHGH 589
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
P +S L GL EEG E+A V + ++ G+ + IDG +K G
Sbjct: 590 LPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNG 642
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 144/335 (42%), Gaps = 40/335 (11%)
Query: 123 PARDVIRVA-LRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIET 179
P ++ VA L+ + D ++ + +V + G P +++ I NI++ E
Sbjct: 355 PTYTILIVAMLKEGDFDYAHRILDQMVSS----GYQPDVYIYTAFIHAFCTRGNIKEAE- 409
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVIS-GYEIYREVFGLDSDATAG------ 232
D++ M+ RG+ T L+ + G G+++ +++ + +F D +
Sbjct: 410 --DMMSMMFERGVMPDALT-YTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLI 466
Query: 233 -------IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
+ K K V + F A + ++ FE +++ +M GC P+ +Y
Sbjct: 467 KHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTY 526
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ L+ C+ R+ A+KL++ M ++ V YN+++ CE+G A M
Sbjct: 527 AKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMME 586
Query: 346 SG----VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK- 400
G +ES +V F G G + A +V++++ + G+ + ++LI L
Sbjct: 587 HGHLPLLESLNVLF----CGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNG 642
Query: 401 --RRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
E L +++AR G ++Y LI+GL
Sbjct: 643 LSDGCSELLGVMEAR----GCQIHPQTYRMLIEGL 673
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 159/325 (48%), Gaps = 23/325 (7%)
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
L+ C E+ K E +I ++ +GL V V+T NALI + +G + ++ +
Sbjct: 424 LMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLK-- 481
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
A G ++ R+ T+N ++ G + ++ + +M + G +PD
Sbjct: 482 ------AMVNSGVELDRI--------TYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDL 527
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+++++ + +C ++ E L ++M+ + ++ D+V Y TII G+C+ +M +A E+ E
Sbjct: 528 FTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTE 587
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
+ +G+ ++V + L+ GY R G++ AI + + M G +P T L+ +C
Sbjct: 588 LMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGL 647
Query: 403 VFEALDILKARVVK---FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
V E + +VK G+ Y +I+G C+ GK++EA+ EM +G P+
Sbjct: 648 VEEVKAVFAQCIVKDIELGVI----GYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKM 703
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ + Y K GN E A+ L EM
Sbjct: 704 TYTTLMFAYSKSGNKEEASKLFDEM 728
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 154/363 (42%), Gaps = 50/363 (13%)
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
DLL++ CL + D L +RG S + TC+ L+ + G + ++ R+
Sbjct: 141 DLLVRACLNSPAPGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQL----DVARK 196
Query: 222 VFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
VFG D GK V P+VHT+ A++ R G + + E+ R G +P
Sbjct: 197 VFGEMRD-----GKTVA------PDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPT 245
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
+Y+VLM C+ R+ EA +L M + V +V + +I G + +
Sbjct: 246 VVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQ 305
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM G+ + V + ++ +CR G A+ ++++M KG + T ++ LC +
Sbjct: 306 EMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEG 365
Query: 402 RVFEA---LD--ILKARVVKFGLF------------------------------PTEKSY 426
+ A LD +L +V LF P +
Sbjct: 366 EMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALM 425
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
I+ LC+ GK EEA ++ +++GKG ++ +A I G + N++ AT + K M
Sbjct: 426 TACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVN 485
Query: 487 NQV 489
+ V
Sbjct: 486 SGV 488
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 192/458 (41%), Gaps = 57/458 (12%)
Query: 78 ALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN 137
ALG +A + F + + +Y +I L RA I A ++ LR
Sbjct: 184 ALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAML-AELRRSGI 242
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIE-KIETCVDIVRMLMSRGLS--V 194
P + + VL+ + G F L + + +E ++ + +L+S GL+
Sbjct: 243 QPTVVTYNVLMDALCKSGRVEEAFRL------KGRMVEGRVRPSIVTFGILIS-GLARGQ 295
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREVFGLD------SDATAGIGKDVKRVVRVRPNVH 248
+ A++ E+ +G G+ IY E+ G S+A + V + ++ V
Sbjct: 296 QFGEVGAVLQEM-QGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSK--GIKQTVV 352
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV----------------- 291
T+N + +EG E E + EM G C ++ ++A
Sbjct: 353 TYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIRE 412
Query: 292 -------------------FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
C+ + EA ++W ++ K + +V N +I G C+
Sbjct: 413 MLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNN 472
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
M A + + M SGVE +T+ ++ G C+A +D AI + +DM ++GF+P+ T +
Sbjct: 473 MKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNI 532
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
+ C+ +V E L +L ++ GL P +Y +I G C+ M +A + E++
Sbjct: 533 FLHTYCNLGKVEEILHLLD-QMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKN 591
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
G P+ IY+A I GY + GN+ A + M N ++
Sbjct: 592 GLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQ 629
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 158/386 (40%), Gaps = 70/386 (18%)
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
LKLF+ +V + ++L+ K + +E E +D ML++ G+ V S N
Sbjct: 336 LKLFDEMVS--KGIKQTVVTYNLIAKALCKEGEMEHAEKILD--EMLLA-GMMVHCSLFN 390
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR------VRPNVHTFNALM 254
+++ RG G + V R++R ++PN A +
Sbjct: 391 SVVAWHLRGTGRLD---------------------LVLRLIREMLARFLKPNDALMTACI 429
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
+ G E+ ++W ++ G + + + L+ C+ M+EA K+ + M + VE
Sbjct: 430 QELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVE 489
Query: 315 HDVVAYNTIIGG-----------------------------------FCEIGEMARAEEF 339
D + YN +I G +C +G++
Sbjct: 490 LDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHL 549
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+M G++ VT+ +++GYC+A D+ A ++ + G P LIG
Sbjct: 550 LDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGR 609
Query: 400 KRRVFEALDILKARVVKF-GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ +A+ IL +K+ G+ PT +Y L+ +C G +EE V A+ + K E +
Sbjct: 610 NGNISDAIGILD--TMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGV 667
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ I G+ K G ++ A M KEM
Sbjct: 668 IGYTIIIQGFCKIGKIDEAVMYFKEM 693
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 56/297 (18%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDAT 230
N+ K+E + ++ + S GL + T +I + K + E E+ GL
Sbjct: 539 NLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGL----- 593
Query: 231 AGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
RPN +NAL+ G+ R G + M G +P +Y+ LM
Sbjct: 594 -------------RPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMY 640
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C + E + ++ + K++E V+ Y II GFC+IG++ A +F+EM G+
Sbjct: 641 WMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPP 700
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ +T+ L+ Y ++G+ + A ++++M G P+
Sbjct: 701 NKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPD------------------------ 736
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
SY LI G CE +++ ++ AEM + + Y+AF+DG
Sbjct: 737 ------------SVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDG 781
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFEALDILKARVVKFGL 419
G + A + ++ +G P T +L+ G+L R+VF + K +
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKT------V 207
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y +IK LC G+++ A + AE+ G +P++ Y+ +D K G VE A
Sbjct: 208 APDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFR 267
Query: 480 LRKEMFENQVR 490
L+ M E +VR
Sbjct: 268 LKGRMVEGRVR 278
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 196/467 (41%), Gaps = 83/467 (17%)
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGP--ARDVIR--VALRSPENDPK 140
PHLA + + + + SL + ++ L+R+ P + DV R +ALR P
Sbjct: 153 PHLAAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRL---HPN 209
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
F +LV T+ G+ + + + + GLS V T N
Sbjct: 210 HYTFNLLVHTHCSKGT--------------------LADALSTLSTMQGFGLSPDVVTYN 249
Query: 201 ALIWEVSRGKGVIS------------GYEIYREVFGLDSDATAGIG--KDVKRVVRV--- 243
L+ R KG++ G R + A A +G K VV
Sbjct: 250 TLLKAHCR-KGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTA 308
Query: 244 ---RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEERRMR 299
P++ T+N L G + G ++ + EM L PD +Y+ L+ + +R
Sbjct: 309 FGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSS 368
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A L EEMRDK V+ +V +N ++ G C G++ A + M G+ +T+ L+
Sbjct: 369 DALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLI 428
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV----- 414
+ YC+A +V A ++ ++M R G + + T+ L+ LC ++R EA ++L++
Sbjct: 429 DAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFV 488
Query: 415 ---VKFG--------------------------LFPTEKSYMFLIKGLCEEGKMEEALKV 445
V +G L P+ +Y LIKGLC GK+ EA+
Sbjct: 489 PDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDK 548
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
E++ KG P Y+ I Y KEG++E A +M EN + +
Sbjct: 549 LNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPD 595
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 144/308 (46%), Gaps = 18/308 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++E + ++M+ GL+ V T N LI + + V + + +D +G+
Sbjct: 401 QLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVL------MDEMVRSGLKM 454
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D T N L+ +E +E+ E++ + G PD SY +MA + +E
Sbjct: 455 DT----------FTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKE 504
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ A LW+EM + + + YNT+I G C IG++ A + E+ G+ T+
Sbjct: 505 NKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTY 564
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++ YC+ GD++ A +N M F+P+ T L+ LC ++ +A+ + ++
Sbjct: 565 NIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAE 624
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K G +Y LI+ LC++G ++ AL A+M +G +P Y+ + + G E
Sbjct: 625 K-GKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSE 683
Query: 476 MA-TMLRK 482
A ML K
Sbjct: 684 EAQNMLHK 691
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 125/309 (40%), Gaps = 27/309 (8%)
Query: 136 ENDPKLKLFEVLVKTYRECGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSV 194
EN P+ L+ + R+ + + ++ LIK C I K+ +D + LM +GL
Sbjct: 504 ENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLC----TIGKLTEAIDKLNELMKKGLVP 559
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALM 254
+T N +I + + ++ + ++ +P+V T N LM
Sbjct: 560 DDTTYNIIIHAYCKEGDLEKAFQFHNKMLE----------------NYFKPDVVTCNTLM 603
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
G G EK ++ A G + D +Y+ L+ C++ + A + +M + ++
Sbjct: 604 NGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQ 663
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
D YN ++ E G A+ ++ SG S ++ L+ V
Sbjct: 664 PDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYP-LIKSSAEEVKTGKDPEV 722
Query: 375 YNDMCRKGFEPEGSTIEVL---IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
+D C G +G E + ELC ++ EA +L + K G+ +Y+ L++
Sbjct: 723 KSD-CESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQK-GMSVDSSTYITLME 780
Query: 432 GLCEEGKME 440
GL + K +
Sbjct: 781 GLIKRQKRQ 789
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 177/362 (48%), Gaps = 22/362 (6%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKI--ETCVDIVRMLMSRGLSVKV 196
P L +L+ + G F F +L K I K+ + I+ LM +GL +K
Sbjct: 43 PDLVTLSILINCFCHLGQMAFSFSVLGK-------ILKLGYQPNTIILNTLM-KGLCLKG 94
Query: 197 STCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD--VKRVVRV------RPNVH 248
+L + K V G+++ + +G+ + IG+ +++R RP+V
Sbjct: 95 EVKKSLHF---HDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVV 151
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++ ++ G ++ ++ D++ EM G PD +Y+ L+ FC ++ EA L EM
Sbjct: 152 MYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEM 211
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
KN+ ++ YNT+I C+ G++ ++ M GV+ V + L++GYC G+V
Sbjct: 212 ILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEV 271
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A ++ M + G P+ + ++I LC +RV EA+++L+ + K + P +Y
Sbjct: 272 QKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHK-NMIPDTVTYSS 330
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI GLC+ G++ L + EM +G +L Y++ +DG K N++ A L +M E
Sbjct: 331 LIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERG 390
Query: 489 VR 490
++
Sbjct: 391 IQ 392
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 130/243 (53%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+V ++ LM G+ G +K + +++ M + G PD YSY++++ C+ +R+ EA
Sbjct: 251 VKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAM 310
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EM KN+ D V Y+++I G C++G + + +EM G ++ VT+ L++G
Sbjct: 311 NLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGL 370
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ ++D AI ++ M +G +P T LI LC R+ + + + +VK G
Sbjct: 371 CKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVK-GYCID 429
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I GLC+EG +EAL ++++M G P+ + I +++ + A L
Sbjct: 430 VWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLH 489
Query: 483 EMF 485
EM
Sbjct: 490 EMI 492
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 125/243 (51%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V T+ L+ GF G + + EM P+ Y+Y+ L+ C+E +++E++
Sbjct: 181 IFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESK 240
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L M K V+ DVV Y+ ++ G+C +GE+ +A++ F M +GV ++ ++NG
Sbjct: 241 NLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGL 300
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ VD A+ + +M K P+ T LI LC R+ LD+ K + G
Sbjct: 301 CKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTK-EMHHRGQPAN 359
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ GLC+ +++A+ + +M +G +P+ Y+A IDG K G ++ L +
Sbjct: 360 LVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQ 419
Query: 483 EMF 485
+
Sbjct: 420 HLL 422
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 122/250 (48%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T + L+ F G V ++ +LG +P+ + LM C + ++++
Sbjct: 41 IVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSL 100
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ + + D V+Y ++ G C+IGE A + R + V + +++G
Sbjct: 101 HFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGL 160
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ VD A +Y++M +G P+ T LI C ++ EA +L ++K + P
Sbjct: 161 CKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILK-NINPN 219
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI LC+EGK++E+ + A M KG +P + IYS +DGY G V+ A +
Sbjct: 220 IYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFL 279
Query: 483 EMFENQVRQE 492
M + V +
Sbjct: 280 VMVQTGVNPD 289
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 7/256 (2%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
++R P + F ++ + + V + +M G PD + S+L+ FC +M
Sbjct: 3 LLRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMA 62
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+ + ++ + + + NT++ G C GE+ ++ F ++ G + V++ L+
Sbjct: 63 FSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILL 122
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVK 416
NG C+ G+ AI + + + P+ +I LC + V EA D+ + AR
Sbjct: 123 NGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNAR--- 179
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G+FP +Y LI G C G++ EA + EM+ K P++ Y+ ID KEG V+
Sbjct: 180 -GIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKE 238
Query: 477 ATMLRKEMFENQVRQE 492
+ L M + V+ +
Sbjct: 239 SKNLLAVMTKKGVKPD 254
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 143/318 (44%), Gaps = 38/318 (11%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
++ +Y T+I L + + +++++ V + P + ++ +L+ Y
Sbjct: 219 NIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVK-PDVVIYSILMDGY------------ 265
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
CL + +++ I +++ G++ V + N +I + +GK V + RE+
Sbjct: 266 ----CL----VGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREML 317
Query: 224 GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
K ++ P+ T+++L+ G + G + D+ EM G +
Sbjct: 318 H-------------KNMI---PDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLV 361
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+Y+ L+ C+ + + +A L+ +M+++ ++ + Y +I G C+ G + + + F+ +
Sbjct: 362 TYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHL 421
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
+ G T+ +++G C+ G D A+ + + M G P T E++I L +K
Sbjct: 422 LVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDEN 481
Query: 404 FEALDILKARVVKFGLFP 421
+A +L + K GL P
Sbjct: 482 DKAEKLLHEMIAK-GLLP 498
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 135/285 (47%), Gaps = 42/285 (14%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN+ TFN+++ G + G E V+ EM R G PD SY+ L+ +C+ EA
Sbjct: 256 LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEAL 315
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ EM K + DVV + ++I C+ G + RA R+M G++ + VTF L++G+
Sbjct: 316 SVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGF 375
Query: 363 CRAGDVDSAILVYNDM--CR---------------------------------KGFEPEG 387
C+ G +D A+L M CR KG +P+
Sbjct: 376 CKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDV 435
Query: 388 STIEVLIGEL---CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
T +I CD FE L ++++ G+ P +Y LI+ LC E ++ +A
Sbjct: 436 VTYSTIISAYCKNCDTHSAFE----LNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHV 491
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ M+ G +P Y++ IDG+ KEGNVE A L +M + V
Sbjct: 492 LFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGV 536
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 148/304 (48%), Gaps = 19/304 (6%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++S G++ V T N L+ + I R++ G AG G PN
Sbjct: 181 MLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRG------AGCG----------PN 224
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T+N L+ F+R G + E + M G +P+ +++ ++ C+ +M +A K+++
Sbjct: 225 VVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFD 284
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
EM + + D V+YNT++GG+C+ G A F EM G+ VTF L++ C+AG
Sbjct: 285 EMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAG 344
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK-FGLFPTEKS 425
+++ A+ + M +G + T LI C K + +AL L R +K + P+
Sbjct: 345 NLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL--LAVRGMKQCRIKPSVVC 402
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI G C G+M+EA ++ EM KG +P + YS I Y K + A L ++M
Sbjct: 403 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 462
Query: 486 ENQV 489
E V
Sbjct: 463 EKGV 466
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 45/347 (12%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
F LI + N+E+ V +VR + RGL + T ALI + KG +
Sbjct: 332 TFTSLIHVMCKAGNLER---AVTLVRQMRERGLQMNEVTFTALIDGFCK-KGFLD----- 382
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
DA + + +K+ R++P+V +NAL+ G+ G ++ ++ EM G +
Sbjct: 383 --------DALLAV-RGMKQC-RIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLK 432
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +YS +++ +C+ A +L ++M +K V D + Y+++I C ++ A
Sbjct: 433 PDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVL 492
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F+ M G++ T+ L++G+C+ G+V+SA+ +++ M + G P+ T VLI L
Sbjct: 493 FKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSK 552
Query: 400 KRRVFEALDILKARVVKFGLFPTE--------------------KSYMFLIKGLCEEGKM 439
R EA +L F L+ + KS + L+KG C +G M
Sbjct: 553 SARAMEAQQLL------FKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLM 606
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
EA KV M+ + + +YS I G+ + GNV A K+M +
Sbjct: 607 NEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQ 653
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 129/246 (52%), Gaps = 2/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V +NA+++ + + + M G P+ Y+Y++L+ C +EA +
Sbjct: 154 PSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+MR +VV YNT++ F GE+ AE M G++ + VTF +VNG C+
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG ++ A V+++M R+G P+G + L+G C EAL + A + + G+ P
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVF-AEMTQKGIMPDVV 331
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI +C+ G +E A+ + +M +G + + ++A IDG+ K+G ++ A + + M
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391
Query: 485 FENQVR 490
+ +++
Sbjct: 392 KQCRIK 397
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 87/232 (37%), Gaps = 51/232 (21%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL-------------- 288
++P+ T+ +L+ G +EG E + +M + G PD +YSVL
Sbjct: 501 LQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 560
Query: 289 ------------------------------------MAVFCEERRMREAEKLWEEMRDKN 312
+ FC + M EA+K+++ M D+N
Sbjct: 561 QLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRN 620
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
D Y+ +I G C G + +A F ++M G +S + L+ G G V A
Sbjct: 621 WNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEAD 680
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
V + + + LI ++ V LD+L + K GL P+ +
Sbjct: 681 QVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHG-MAKDGLLPSPR 731
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 162/348 (46%), Gaps = 26/348 (7%)
Query: 141 LKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
LK+ +V+V+ G P F +++++ C + +E+ + I+ ++ RG ++T
Sbjct: 310 LKVMDVMVQE----GHDPDVFTYNIVVNCLCKNGQLEEAK---GILNQMVERGCLPDITT 362
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
N LI + G + ++ R+V + + P+V+TFN L+
Sbjct: 363 FNTLIVALCSGNRLEEALDLARQV----------------TLKGLSPDVYTFNILINALC 406
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ G + ++ EM GC PD +Y+ L+ C ++ +A L +EM V
Sbjct: 407 KVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTV 466
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
YNTII G C+ + AEE F +M L G+ +++TF L++G C+ +D A + + M
Sbjct: 467 TYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQM 526
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+G +P T ++ C + + +A DIL+ G +Y LI GLC+ G+
Sbjct: 527 ISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTAN-GFEVDVVTYGTLINGLCKAGR 585
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ ALK+ M KG + + Y+ I + N A L +EM E
Sbjct: 586 TQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTE 633
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 149/325 (45%), Gaps = 20/325 (6%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
V++ L+ +E ++ +ET + + RG+ V T N L+ K + +++
Sbjct: 152 VYNHLLNVLVEGSKMKLLET---VYSEMGERGIKPDVVTFNTLM------KALCRAHQVR 202
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
V L+ +++G+ P+ TF LM GF EG+ + V M +GC
Sbjct: 203 TAVLMLEEMSSSGVA----------PDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCS 252
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P + +VL+ +C+ R+ +A ++ E D + YNT + G C+ G + A +
Sbjct: 253 PTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKV 312
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
M G + T+ +VN C+ G ++ A + N M +G P+ +T LI LC
Sbjct: 313 MDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCS 372
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
R+ EALD+ + +K GL P ++ LI LC+ G + AL++ EM G P
Sbjct: 373 GNRLEEALDLARQVTLK-GLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEV 431
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ ID G + A L KEM
Sbjct: 432 TYNTLIDNLCSLGKLGKALDLLKEM 456
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 124/243 (51%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N ++ + G E+ + + +M GC PD +++ L+ C R+ EA L
Sbjct: 323 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDL 382
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ K + DV +N +I C++G+ A F EM SG VT+ L++ C
Sbjct: 383 ARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCS 442
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A+ + +M G T +I LC K R+ EA ++ ++ G+
Sbjct: 443 LGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQ-GISRNAI 501
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI GLC++ ++++A ++ ++M+ +G +P+ Y++ + Y K+G+++ A + + M
Sbjct: 502 TFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTM 561
Query: 485 FEN 487
N
Sbjct: 562 TAN 564
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 6/242 (2%)
Query: 247 VHTFNALMVGFYREGAF-EKVEDVWVEMARL-GCEPDCYSYSVLMAVFCEERRMREAEKL 304
VH+F + + R+ F + V+ V ++ L G + D Y+ L+ V E +M+ E +
Sbjct: 116 VHSF---LESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETV 172
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM ++ ++ DVV +NT++ C ++ A EM SGV TF L+ G+
Sbjct: 173 YSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVE 232
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + +A+ V M G P T+ VLI C RV +AL ++ + G P +
Sbjct: 233 EGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIAN-GFEPDQI 291
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y + GLC+ G + ALKV MV +G +P + Y+ ++ K G +E A + +M
Sbjct: 292 TYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 351
Query: 485 FE 486
E
Sbjct: 352 VE 353
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 155/357 (43%), Gaps = 42/357 (11%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIR-VALR--SPE--------------NDPKL-- 141
C ++++ T+I L + A D+ R V L+ SP+ DP+L
Sbjct: 356 CLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLAL 415
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
+LFE + + C ++ LI + ++ K+ +D+++ + S G T N
Sbjct: 416 RLFEEMKSS--GCTPDEVTYNTLID---NLCSLGKLGKALDLLKEMESAGCPRSTVTYNT 470
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
+I + + + E++ ++ D++ + R N TFN L+ G ++
Sbjct: 471 IIDGLCKKMRIEEAEEVFDQM-------------DLQGISR---NAITFNTLIDGLCKDK 514
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ + +M G +P+ +Y+ ++ +C++ +++A + + M E DVV Y
Sbjct: 515 RIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYG 574
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
T+I G C+ G A + R M + G+ ++ + ++ R + A+ ++ +M
Sbjct: 575 TLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEV 634
Query: 382 GFEPEGSTIEVLIGELC-DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
G P+ T +++ LC + EA D L V K G P S+ L +GL G
Sbjct: 635 GEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDK-GFIPEFSSFRMLAEGLLNLG 690
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 154/319 (48%), Gaps = 17/319 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ V+++ +++R S T N LI + + V E+ R + + GI
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL------TSKGI-- 396
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
P+V TFN+L+ G +++ EM GCEPD ++Y++L+ C +
Sbjct: 397 --------LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
++ EA + ++M V+ YNT+I GFC+ + AEE F EM + GV +SVT+
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C++ V+ A + + M +G +P+ T L+ C + +A DI++A +
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA-MT 567
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G P +Y LI GLC+ G++E A K+ + KG + Y+ I G ++
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTT 627
Query: 476 MATMLRKEMFENQVRQEDG 494
A L +EM E D
Sbjct: 628 EAINLFREMLEQNEAPPDA 646
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 122/240 (50%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +TFN L+ G + G + ++ M + G +PD Y+Y+ +++ C+ ++EA ++
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M ++ + V YNT+I C+ ++ A E R + G+ TF L+ G C
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ A+ ++ +M KG EP+ T +LI LC K ++ EAL++LK + G +
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCARSVI 471
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C+ K EA ++ EM G + Y+ IDG K VE A L +M
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 144/314 (45%), Gaps = 21/314 (6%)
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSD----ATAGIG----KDVKRV 240
G+ VST N LI + R + + ++ +GL D T G D+
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 241 VRVRPNVHTF---------NALMVGFYREGAFEKVEDVWVEMARL-GCEPDCYSYSVLMA 290
+R+R + F N ++ GF +EG E + EM+ G PD Y+++ L+
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C+ ++ A ++ + M + + DV YN++I G C++GE+ A E +M
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
++VT+ L++ C+ V+ A + + KG P+ T LI LC R A+++
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ K G P E +Y LI LC +GK++EAL + +M G S+ Y+ IDG+ K
Sbjct: 424 EEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 471 EGNVEMATMLRKEM 484
A + EM
Sbjct: 483 ANKTREAEEIFDEM 496
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 165/357 (46%), Gaps = 29/357 (8%)
Query: 152 RECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
R+C ++ LI C E ++E ++ R+L S+G+ V T N+LI + +
Sbjct: 359 RDCSPNTVTYNTLISTLCKE----NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 211 GVISGYEIYREV-----------FGLDSDATAGIGKDVKRVVRVRP--------NVHTFN 251
E++ E+ + + D+ GK + + ++ +V T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
L+ GF + + E+++ EM G + +Y+ L+ C+ RR+ +A +L ++M +
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
+ D YN+++ FC G++ +A + + M +G E VT+ L++G C+AG V+ A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
+ + KG +I L KR+ EA+++ + + + P SY + +
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 432 GLCE-EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY----MKEGNVEMATMLRKE 483
GLC G + EA+ E++ KGF P +G M+E V++ M+ ++
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQK 711
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 124/241 (51%), Gaps = 2/241 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ H +N ++ + + VE +M+ G +PD +++VL+ C ++R A
Sbjct: 150 LKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAI 209
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ E+M + D + T++ G+ E G++ A +M G S+V+ +V+G+
Sbjct: 210 LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 363 CRAGDVDSAILVYNDMCRK-GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G V+ A+ +M + GF P+ T L+ LC V A++I+ +++ G P
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV-MLQEGYDP 328
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y +I GLC+ G+++EA++V +M+ + P+ Y+ I KE VE AT L
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 482 K 482
+
Sbjct: 389 R 389
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 106/215 (49%), Gaps = 1/215 (0%)
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
W+ + G +PD + Y+ ++ + + ++ E +M ++ DV +N +I C
Sbjct: 143 WM-IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCR 201
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
++ A +M G+ TF ++ GY GD+D A+ + M G +
Sbjct: 202 AHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVS 261
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
+ V++ C + RV +AL+ ++ + G FP + ++ L+ GLC+ G ++ A+++ M
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ +G++P + Y++ I G K G V+ A + +M
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 82/179 (45%), Gaps = 2/179 (1%)
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ N + Y I+ G ++ +M S E + TF L+ Y +
Sbjct: 75 KKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ 134
Query: 369 DSAILVYNDMCRK-GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
D + V + M + G +P+ ++ L D + + ++I A++ +G+ P ++
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSL-KLVEISHAKMSVWGIKPDVSTFN 193
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LIK LC ++ A+ + +M G P + ++ + GY++EG+++ A +R++M E
Sbjct: 194 VLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVE 252
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 155/313 (49%), Gaps = 28/313 (8%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+++ ++ R +S V T NALI + E+Y E+ GI
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEML------PRGI--------- 356
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN T+N+++ GF ++ + ED++ MA GC PD ++++ L+ +C +R+ +
Sbjct: 357 -IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM 415
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM + + + V YNT+I GFC +G++ A + ++M SGV VT L++G
Sbjct: 416 ELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 475
Query: 363 CRAGDVDSAILVYNDMCR-----------KGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
C G + A+ ++ M + G EP+ T +LI L ++ + EA + L
Sbjct: 476 CDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE-LY 534
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ G+ P +Y +I GLC++ +++EA ++ M K F P++ ++ I+GY K
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKA 594
Query: 472 GNVEMATMLRKEM 484
G V+ L EM
Sbjct: 595 GRVDDGLELFCEM 607
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 134/259 (51%), Gaps = 1/259 (0%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
D+ + + + ++ V + PNV ++A++ ++G ++++ EM G PD ++Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ ++ FC R +AE+L +EM ++ + DVV YN +I F + G+ A E + EM
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP 353
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G+ +++T+ +++G+C+ +D+A ++ M KG P+ T LI C +R+ +
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 413
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+++L + + GL +Y LI G C G + AL + +M+ G P + + +
Sbjct: 414 GMELLH-EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 472
Query: 466 DGYMKEGNVEMATMLRKEM 484
DG G ++ A + K M
Sbjct: 473 DGLCDNGKLKDALEMFKAM 491
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 126/247 (51%), Gaps = 9/247 (3%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATA 231
+ + +D+ + ++S G+ + TCN L+ + + E+++ + +D DA+
Sbjct: 443 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 502
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
V P+V T+N L+ G EG F + E+++ EM G PD +YS ++
Sbjct: 503 PFNG-------VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C++ R+ EA +++ M K+ +VV +NT+I G+C+ G + E F EMG G+ +
Sbjct: 556 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 615
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
++ + L+ G+ + G+++ A+ ++ +M G P+ TI ++ K + A+ +L+
Sbjct: 616 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 675
Query: 412 ARVVKFG 418
+ G
Sbjct: 676 DLQMSVG 682
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 118/251 (47%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P+V F LM R + V ++ +M R D YS+++L+ FC ++ A
Sbjct: 74 RPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFA 133
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ ++ + DVV + T++ G C ++ A +FF +M + + VTF L+NG
Sbjct: 134 LSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNG 193
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
CR G + A+ + + M G +P T ++ +C K AL++L+ + P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y +I LC++G+ +A + EM KG P L Y++ I G+ G A L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313
Query: 482 KEMFENQVRQE 492
+EM E ++ +
Sbjct: 314 QEMLERKISPD 324
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 136/305 (44%), Gaps = 31/305 (10%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV------------ 222
++++ D+ ++ ++G S V T LI K + G E+ E+
Sbjct: 374 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 433
Query: 223 ------FGLDSDATAGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
F L D A + + + V P++ T N L+ G G + +++ M +
Sbjct: 434 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 493
Query: 276 L-----------GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
G EPD +Y++L+ E + EAE+L+EEM + + D + Y+++I
Sbjct: 494 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G C+ + A + F MG + VTF L+NGYC+AG VD + ++ +M R+G
Sbjct: 554 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 613
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
+ LI + ALDI + ++ G++P + ++ G + ++E A+
Sbjct: 614 ADAIIYITLIYGFRKVGNINGALDIFQ-EMISSGVYPDTITIRNMLTGFWSKEELERAVA 672
Query: 445 VQAEM 449
+ ++
Sbjct: 673 MLEDL 677
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 2/238 (0%)
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L GF+ E D++ +M R P + LM V R L+++M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ D+ ++N +I FC ++ A F ++ G+ VTF L++G C V A+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
++ M P T L+ LC + R+ EA+ +L R+++ GL PT+ +Y ++ G
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD-RMMEDGLQPTQITYGTIVDG 228
Query: 433 LCEEGKMEEALKVQAEMVG-KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+C++G AL + +M P++ IYSA ID K+G A L EM E +
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 198/458 (43%), Gaps = 47/458 (10%)
Query: 35 SDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSF 94
+D + L ++S R S H L +TP ++ L N LA RFF +
Sbjct: 33 ADPAKRLFKLIISC----RKASAVEHELDHSGVRVTPDVAERVLERLDNAGMLAYRFFEW 88
Query: 95 T--QHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYR 152
Q + C H++ SY T++ L++ R DV+ V R E ++ F ++++ Y
Sbjct: 89 ARRQKRGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRR--EGAVNVETFGIIMRKYA 146
Query: 153 ECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
+K++ V ++ G+ ++ N+L+ + + K V
Sbjct: 147 RA--------------------QKVDEAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNV 186
Query: 213 ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
EI+ ++ R P+ T++ L+ G+ R K+ +V+ E
Sbjct: 187 RKAQEIFDKMNS-----------------RFSPDAKTYSILLEGWGRAPNLPKMREVYSE 229
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M GCEPD +Y +++ C+ R+ EA ++ ++M + + Y+ ++ +
Sbjct: 230 MLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMR 289
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A F +M G+ V + LV+ +C+A ++A V NDM G T +
Sbjct: 290 IEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNI 349
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
++ L R EA + + R++K P +Y +IK CE K+E ALKV M K
Sbjct: 350 ILNHLISLGRDDEAYKVFR-RMIKC-CQPDCDTYTMMIKMFCENDKVEMALKVWKYMRLK 407
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
F PS+ +S I+G + V A +L ++M E +R
Sbjct: 408 QFLPSMHTFSVLINGLCDKREVSQACVLLEDMIEKGIR 445
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 94/210 (44%), Gaps = 22/210 (10%)
Query: 150 TYRECGSAPFVFDLLIKCC-LEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
T R C +++ +L+ +E++ + + T +D+ + G+ + NAL+ +
Sbjct: 266 TSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEK----DGIVPDIVVYNALVSAFCK 321
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVED 268
K + + + ++ G + N T+N ++ G ++
Sbjct: 322 AKKFENAFRVLNDMEGHG----------------ITTNSRTWNIILNHLISLGRDDEAYK 365
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
V+ M + C+PDC +Y++++ +FCE ++ A K+W+ MR K + ++ +I G C
Sbjct: 366 VFRRMIKC-CQPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFLPSMHTFSVLINGLC 424
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+ E+++A +M G+ TF L
Sbjct: 425 DKREVSQACVLLEDMIEKGIRPPGSTFGKL 454
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 215/476 (45%), Gaps = 50/476 (10%)
Query: 53 RSKSRWNHLLSLCRSGLT---PTQFSQIALGLKNNPHLALRFFSF-TQHKSLCKHSLSSY 108
RSK RW L P+ FS++ L NN L+LRFF + + H +S
Sbjct: 69 RSKPRWEQSLLSDYPSFNFHDPSFFSELLKQL-NNVFLSLRFFLWLSSQPEFLPHPVSC- 126
Query: 109 ATIIHILSRARLIGPARDVIRVALRSPENDP---------KLKLFEVLVKTY---RECGS 156
+ L A+ PA+ + SPE + L E V T+ +E G
Sbjct: 127 NKLFDALLEAKACVPAKSFLYSFEFSPEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGY 186
Query: 157 APFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLS--VKVSTCNALIWEVSRGKGV 212
P+V ++ + CL+ + I + +M G+ V + T LI V
Sbjct: 187 RPYVETWNFAFQSCLKFGRTDLI---WKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKV 243
Query: 213 ISGYEIYREVF--GLD--SDA----TAGIGKDVKR----------VVRVR-PNVHTFNAL 253
YEI R+ GL +DA +G K+ +V+ R P++ T+ +
Sbjct: 244 SRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEI 303
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ GF + + +V+ + G PD Y+ L+ FC+ ++ +A KLW EM DK
Sbjct: 304 INGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGF 363
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
+ +YNT+I GFC+IG + A + +++M SG + ++++ L+ G C G D A
Sbjct: 364 LPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYD 423
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ +M K + T LI C + +V ++ D+LK K GL P+ SY LI+ L
Sbjct: 424 FFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAK-GLQPSTSSYAHLIQKL 482
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSL----EIYSAFID-GYMKEGNVEMATMLRKEM 484
C+ G ++EA ++ +M +G +P + I S + GY+ EG + TML+ +
Sbjct: 483 CQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNL 538
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 7/193 (3%)
Query: 303 KLWEEMRDKNVEHDV----VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
KL+E M + V+ DV V Y +I FC +++RA E R+ G+ + F L
Sbjct: 211 KLYEGMMETGVQKDVDIETVGY--LIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKL 268
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++G+C+ + + + + M K P+ T + +I C +A ++ A + G
Sbjct: 269 ISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDR-G 327
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
P Y LI G C+ G++E+A K+ EM+ KGF P+ Y+ I G+ K GN++ A
Sbjct: 328 YAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAM 387
Query: 479 MLRKEMFENQVRQ 491
L K+M ++ ++
Sbjct: 388 KLYKKMLDSGYKE 400
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 138/270 (51%), Gaps = 10/270 (3%)
Query: 213 ISGYEIYREVFGLDSDATAGIGKDVKRVVRVR-----PNVHTFNALMVGFYREGAFEKVE 267
+SG+ Y + +S G+G+ +K + +R P+V T+N L+ G +EG ++
Sbjct: 82 LSGFSFYVQTTCKES----GVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 137
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
M GC+P+ ++++++ C R +AEKL +M K VV +N +I
Sbjct: 138 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 197
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C G + RA + +M + G +S+++ L++G+C+ +D AI + M +G P+
Sbjct: 198 CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDI 257
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T L+ LC +V A++IL K G P +Y +I GL + GK E A+K+
Sbjct: 258 VTYNTLLTALCKDGKVDVAVEILNQLSSK-GCSPVLITYNTVIDGLSKVGKTERAIKLLD 316
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
EM KG +P + YS+ + G +EG V+ A
Sbjct: 317 EMRRKGLKPDIITYSSLVSGLSREGKVDEA 346
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N L+ GF +E ++ + M GC PD +Y+ L+ C++ ++ A ++
Sbjct: 220 PNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 279
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ K ++ YNT+I G ++G+ RA + EM G++ +T+ LV+G R
Sbjct: 280 LNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 339
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G VD AI ++D+ G P T ++ LC R+ A+D L A ++ PTE
Sbjct: 340 EGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL-AYMISKRCKPTEA 398
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+Y LI+G+ EG +EAL + E+ +G
Sbjct: 399 TYTILIEGIAYEGLAKEALDLLNELCSRGL 428
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 122/240 (50%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN L+ R+G + D+ +M GC P+ SY+ L+ FC+E++M A +
Sbjct: 185 PSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 244
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + D+V YNT++ C+ G++ A E ++ G +T+ +++G +
Sbjct: 245 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 304
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + AI + ++M RKG +P+ T L+ L + +V EA+ + G+ P
Sbjct: 305 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD-LEGLGIRPNAI 363
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y ++ GLC+ + + A+ A M+ K +P+ Y+ I+G EG + A L E+
Sbjct: 364 TYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 423
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 127/293 (43%), Gaps = 39/293 (13%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C S+ ++ +I+ L R L+G A D++ E P C
Sbjct: 183 CSPSVVTFNILINFLCRQGLLGRAIDIL-------EKMP-----------MHGCTPNSLS 224
Query: 161 FD-LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
++ LL C E +K++ ++ + +++SRG + T N L+ + + V EI
Sbjct: 225 YNPLLHGFCKE----KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 280
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
++ ++ G P + T+N ++ G + G E+ + EM R G +
Sbjct: 281 NQL------SSKG----------CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 324
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +YS L++ E ++ EA K + ++ + + + YN+I+ G C+ + RA +F
Sbjct: 325 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 384
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
M + + T+ L+ G G A+ + N++C +G + S +V
Sbjct: 385 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQV 437
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
F V C+ V A+ + ++M KG +P+ T VLI +C + R+ EA+ L +
Sbjct: 85 FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN-NM 143
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+G P ++ +++ +C G+ +A K+ ++M+ KG PS+ ++ I+ ++G +
Sbjct: 144 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 203
Query: 475 EMATMLRKEM 484
A + ++M
Sbjct: 204 GRAIDILEKM 213
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 419 LFP--TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
LFP + + F ++ C+E + +A+K+ EM KG +P + Y+ I+G KEG ++
Sbjct: 76 LFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 135
Query: 477 ATMLRKEM 484
A M
Sbjct: 136 AIKFLNNM 143
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 148/303 (48%), Gaps = 17/303 (5%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++S G++ V T N LI + I R++ G AG G PN
Sbjct: 141 MLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRG------AGCG----------PN 184
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T+N L+ F+R G + E + M G +P+ +++ ++ C+ +M +A K+++
Sbjct: 185 VVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFD 244
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
EM + + D V+YNT++GG+C+ G A F EM G+ VTF L++ C+AG
Sbjct: 245 EMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAG 304
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
+++ A+ + M +G + T LI C K + +AL ++ + + + P+ Y
Sbjct: 305 NLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG-MRQCRIKPSVVCY 363
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI G C G+M+EA ++ EM KG +P + YS I Y K + A L ++M E
Sbjct: 364 NALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLE 423
Query: 487 NQV 489
V
Sbjct: 424 KGV 426
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 155/347 (44%), Gaps = 58/347 (16%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
+ I+R + G V T N L+ R G + G E + G+ D
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRA-GEVDGAE---RLVGMMLDGG---------- 215
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
++PN+ TFN+++ G + G E V+ EM R G PD SY+ L+ +C+ E
Sbjct: 216 --LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHE 273
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A ++ EM K + DVV + ++I C+ G + A R+M G++ + VTF L++
Sbjct: 274 ALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALID 333
Query: 361 GYCRAGDVDSAILVYNDM--CR---------------------------------KGFEP 385
G+C+ G +D A+L M CR KG +P
Sbjct: 334 GFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKP 393
Query: 386 EGSTIEVLIGEL---CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+ T +I CD FE L ++++ G+ P +Y LI+ LCEE ++ +A
Sbjct: 394 DVVTYSTIISAYCKNCDTHSAFE----LNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDA 449
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ M+ G +P Y++ IDG+ KEGNVE A L +M + V
Sbjct: 450 HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGV 496
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 160/372 (43%), Gaps = 59/372 (15%)
Query: 154 CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVI 213
CG ++ L+ ++ E +V M++ GL + T N+++ + + +
Sbjct: 181 CGPNVVTYNTLVAAFFRAGEVDGAER---LVGMMLDGGLKPNLVTFNSMVNGMCKAGKME 237
Query: 214 SGYEIYREVF--GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
+++ E+ GL D ++N L+ G+ + G + V+
Sbjct: 238 DARKVFDEMMREGLAPDGV------------------SYNTLVGGYCKAGCSHEALSVFA 279
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD--------------- 316
EM + G PD +++ L+ V C+ + A L +MR++ ++ +
Sbjct: 280 EMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKG 339
Query: 317 --------------------VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
VV YN +I G+C +G M A E EM G++ VT+
Sbjct: 340 FLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYS 399
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
+++ YC+ D SA + M KG P+ T LI LC+++R+ +A +L ++K
Sbjct: 400 TIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDA-HVLFKNMIK 458
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
GL P E +Y LI G C+EG +E AL + +MV G P + YS I+G K
Sbjct: 459 LGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAME 518
Query: 477 ATMLRKEMFENQ 488
A L +++ +
Sbjct: 519 AQQLLFKLYHEE 530
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 155/331 (46%), Gaps = 42/331 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+E V +VR + RGL + T ALI + KG + + V G+
Sbjct: 305 NLEWAVTLVRQMRERGLQMNEVTFTALIDGFCK-KGFLD--DALLAVRGM---------- 351
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R R++P+V +NAL+ G+ G ++ ++ EM G +PD +YS +++ +C+
Sbjct: 352 ---RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKN 408
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
A +L ++M +K V D + Y+++I CE ++ A F+ M G++ T+
Sbjct: 409 CDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTY 468
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G+C+ G+V+ A+ +++ M + G P+ T VLI L R EA +L
Sbjct: 469 TSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL----- 523
Query: 416 KFGLFPTE--------------------KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
F L+ E KS + L+KG C +G M EA KV M+ + +
Sbjct: 524 -FKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWN 582
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+YS I G+ + GNV A K+M +
Sbjct: 583 LDGSVYSVLIHGHCRAGNVMKALSFHKQMLQ 613
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 129/246 (52%), Gaps = 2/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V +NA+++ + + + M G P+ Y+Y++L+ C +EA +
Sbjct: 114 PSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+MR +VV YNT++ F GE+ AE M G++ + VTF +VNG C+
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG ++ A V+++M R+G P+G + L+G C EAL + A + + G+ P
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVF-AEMTQKGIMPDVV 291
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI +C+ G +E A+ + +M +G + + ++A IDG+ K+G ++ A + + M
Sbjct: 292 TFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 351
Query: 485 FENQVR 490
+ +++
Sbjct: 352 RQCRIK 357
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 88/232 (37%), Gaps = 51/232 (21%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL-------------- 288
++P+ T+ +L+ G +EG E+ + +M + G PD +YSVL
Sbjct: 461 LQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 520
Query: 289 ------------------------------------MAVFCEERRMREAEKLWEEMRDKN 312
+ FC + M EA+K+++ M D+N
Sbjct: 521 QLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRN 580
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
D Y+ +I G C G + +A F ++M G +S + L+ G G V A
Sbjct: 581 WNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEAD 640
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
V + + + LI ++ V LD+L + K GL P+ +
Sbjct: 641 QVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHG-MAKDGLLPSPR 691
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 155/299 (51%), Gaps = 19/299 (6%)
Query: 195 KVSTCNALIWEVSR-GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNAL 253
K +CNAL+ +S+ G+G +S R+ F KD+ ++ +V T+N +
Sbjct: 20 KPRSCNALLHRLSKVGRGDLS-----RKFF-----------KDMG-AAGIKRSVFTYNIM 62
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ +EG E ++ +M G PD +Y+ L+ + + E ++E+M+D +
Sbjct: 63 IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADC 122
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
+ DV+ YN +I FC+ M +A EF EM +G++ + VT+ ++ +C+ G + AI
Sbjct: 123 DPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIK 182
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ DM R P T LI C + EAL +++ +++ G+ +Y L+ GL
Sbjct: 183 FFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVE-EILQAGIKLNVVTYTALLDGL 241
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
CEEG+M+EA +V M+ G P+ E Y+A + G++K +E A + KEM E ++ +
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 133/267 (49%), Gaps = 24/267 (8%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV T++ + F +EG ++ +V+M R+ P+ ++Y+ L+ C+ + EA
Sbjct: 157 LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEAL 216
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL EE+ ++ +VV Y ++ G CE G M AEE FR M +GV + T+ LV+G+
Sbjct: 217 KLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGF 276
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+A +++ A + +M K +P+ ++ LC++ R+ EA +L + + G+
Sbjct: 277 IKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEA-KLLIGEIKESGINTN 335
Query: 423 EKSY-----------------------MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
Y + L+ GLC+ E A K+ EM+ KG P
Sbjct: 336 AVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKI 395
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFE 486
Y+A IDG MK GN++ A LR M E
Sbjct: 396 AYTALIDGNMKHGNLQEALNLRDRMIE 422
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 133/246 (54%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N+L+ G + G ++ ++ +M C+PD +Y+ L+ FC+ RM +A +
Sbjct: 89 PDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEF 148
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM+ ++ +VV Y+T I FC+ G + A +FF +M + + T+ L++ C+
Sbjct: 149 LHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 208
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG++ A+ + ++ + G + T L+ LC++ R+ EA ++ +A ++ G+ P ++
Sbjct: 209 AGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRA-MLNAGVAPNQE 267
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L+ G + +ME A + EM K +P L +Y + G E +E A +L E+
Sbjct: 268 TYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI 327
Query: 485 FENQVR 490
E+ +
Sbjct: 328 KESGIN 333
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 19/266 (7%)
Query: 225 LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+D++ AG + ++V ++ NV T+ AL+ G EG ++ E+V+ M G
Sbjct: 203 IDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGV 262
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P+ +Y+ L+ F + + M A+ + +EM++K ++ D++ Y TI+ G C + A+
Sbjct: 263 APNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKL 322
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
E+ SG+ +++V + L++ Y ++G A+ + +M L+ LC
Sbjct: 323 LIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD------------LVDGLC 370
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
K FE L ++ G+ P + +Y LI G + G ++EAL ++ M+ G E L
Sbjct: 371 -KNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDL 429
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEM 484
Y+A I G G V+ A L EM
Sbjct: 430 HAYTALIWGLSHSGQVQKARNLLDEM 455
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 127/294 (43%), Gaps = 40/294 (13%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+V ++ G+ + V T AL+ + + E++R + AG+
Sbjct: 218 LVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAML------NAGVA-------- 263
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN T+ AL+ GF + E +D+ EM +PD Y ++ C E R+ EA+
Sbjct: 264 --PNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAK 321
Query: 303 KLWEEMRDKNVEHDVVAYNTI-----------------------IGGFCEIGEMARAEEF 339
L E+++ + + V Y T+ + G C+ A++
Sbjct: 322 LLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKL 381
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F EM G+ + + L++G + G++ A+ + + M G E + LI L
Sbjct: 382 FDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSH 441
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+V +A ++L + K G+ P E YM LIK GK++EAL++Q EM +G
Sbjct: 442 SGQVQKARNLLDEMIGK-GVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 494
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 7/231 (3%)
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
E+ + +++M + P S + L+ + R + K +++M ++ V YN
Sbjct: 2 LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I C+ G++ A F +M +G VT+ L++G+ + G +D I ++ M
Sbjct: 62 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121
Query: 383 FEPEGSTIEVLIGELCDKRRV---FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+P+ T LI C R+ FE L +KA GL P +Y I C+EG +
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKAN----GLKPNVVTYSTFIDAFCKEGML 177
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+EA+K +M P+ Y++ ID K GN+ A L +E+ + ++
Sbjct: 178 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIK 228
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + AL+ G + G ++ ++ M +G E D ++Y+ L+ ++++A L
Sbjct: 392 PDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNL 451
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+EM K V D V Y +I + +G++ A E EM G+
Sbjct: 452 LDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 495
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 144/289 (49%), Gaps = 9/289 (3%)
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRV--------VRVRPNVHTFNALMVGFYREGAF 263
VI+GYE F + D G V + R PNV T+ L+ GF ++G
Sbjct: 369 VIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRL 428
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
E+ ++ M+ G + Y+ L+ C++ + EA +L+ EM K + D+ +N++
Sbjct: 429 EEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSL 488
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I G C+ +M A + +M L GV +++VT+ LV+ + + A + ++M +G
Sbjct: 489 INGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGC 548
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
+ T LI LC V + L + + + K G+FPT S LI GLC GK+ +AL
Sbjct: 549 PLDNITYNGLIKALCKTGAVEKGLGLFEEMLGK-GIFPTIISCNILISGLCRTGKVNDAL 607
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
K +M+ +G P + Y++ I+G K G+V+ A+ L ++ +R +
Sbjct: 608 KFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPD 656
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P V+TF +M + + +MA+ GC P+ Y L+ CE R+ EA
Sbjct: 201 VSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEAL 260
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L E+M E DV +N +I G C G + A + M L G + ++T+ +L++G
Sbjct: 261 QLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGL 320
Query: 363 CRAGDVDSA--------------------------------ILVYNDMCRKGFEPEGSTI 390
CR G VD A L+YN+M G+EP+ T
Sbjct: 321 CRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTF 380
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
++I L K + AL++L V K P +Y LI G C++G++EEA ++ M
Sbjct: 381 NIMIDGLVKKGYLVSALELLNEMVAK-RFEPNVITYTILINGFCKQGRLEEAAEIVNSMS 439
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
KG + Y+ I K+GN+E A L EM
Sbjct: 440 AKGLSLNTVGYNCLICALCKDGNIEEALQLFGEM 473
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 118/235 (50%), Gaps = 1/235 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +N L+ ++G E+ ++ EM+ GC+PD Y+++ L+ C+ +M EA L+
Sbjct: 446 NTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLY 505
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M + V + V YNT++ F + +A + EM G ++T+ L+ C+
Sbjct: 506 HDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKT 565
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G V+ + ++ +M KG P + +LI LC +V +AL L+ + + GL P +
Sbjct: 566 GAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHR-GLTPDIVT 624
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
Y LI GLC+ G ++EA + ++ +G P Y+ I + EG A +L
Sbjct: 625 YNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLL 679
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 35/276 (12%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDV-WVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN +N L+ G+ G FE+ +D+ + M G EPD Y++++++ ++ + A
Sbjct: 338 NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSAL 397
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM K E +V+ Y +I GFC+ G + A E M G+ ++V + L+
Sbjct: 398 ELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICAL 457
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK--------ARV 414
C+ G+++ A+ ++ +M KG +P+ T LI LC ++ EAL + A
Sbjct: 458 CKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANT 517
Query: 415 VKFG----------------------LF---PTEK-SYMFLIKGLCEEGKMEEALKVQAE 448
V + LF P + +Y LIK LC+ G +E+ L + E
Sbjct: 518 VTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEE 577
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
M+GKG P++ + I G + G V A ++M
Sbjct: 578 MLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDM 613
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 138/296 (46%), Gaps = 17/296 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++E +IV + ++GLS+ N LI + + + +++ E+ +G G
Sbjct: 427 RLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEM--------SGKG- 477
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+++TFN+L+ G + E+ ++ +M G + +Y+ L+ F
Sbjct: 478 -------CKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMR 530
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+++A KL +EM + D + YN +I C+ G + + F EM G+ + ++
Sbjct: 531 DSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISC 590
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G CR G V+ A+ DM +G P+ T LI LC V EA ++ ++
Sbjct: 591 NILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFN-KLQ 649
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
G+ P +Y LI C EG +A + + V GF P+ +S I+ +K+
Sbjct: 650 SEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKK 705
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 11/222 (4%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
D+W C+P SY+V++ + + R A ++ +M + V V + ++
Sbjct: 159 DMW---GVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKAL 215
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C + E+ A R+M G +SV ++ L++ C V A+ + DM EP+
Sbjct: 216 CMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDV 275
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T +I LC R+ EA +L R++ G +Y +L+ GLC G+++EA
Sbjct: 276 QTFNDVIHGLCRAGRIHEAAKLLD-RMLLRGFSTDALTYGYLMHGLCRMGQVDEA----R 330
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ K P+ +Y+ I GY+ G E A L ++ N V
Sbjct: 331 ALLNKIPNPNTVLYNTLISGYVASGRFEEAKDL---LYNNMV 369
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 16/186 (8%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
+ I+ +V ++ RG + T N LI + + V G ++ E+ G GI
Sbjct: 531 DSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLG------KGI- 583
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
P + + N L+ G R G +M G PD +Y+ L+ C+
Sbjct: 584 ---------FPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCK 634
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
++EA L+ +++ + + D + YNT+I C G A + SG + VT
Sbjct: 635 MGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVT 694
Query: 355 FEHLVN 360
+ L+N
Sbjct: 695 WSILIN 700
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 125/242 (51%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV T+ +LM G++ K + V+ ++ G P+ +SYSV++ C+ + + EA
Sbjct: 295 VEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAV 354
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL++EM KN+ + V Y+++I G C+ G ++ + E+ G ++ +T+ L+NG
Sbjct: 355 KLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGL 414
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ VD AI + M +G +P+ ST L+ LC R+ +A I + + K G
Sbjct: 415 CKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCK-GYPLN 473
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ Y +I GLC+EG +EAL + ++M G P Y I K A L +
Sbjct: 474 IRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLR 533
Query: 483 EM 484
EM
Sbjct: 534 EM 535
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 152/321 (47%), Gaps = 50/321 (15%)
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
A+I + K VI Y++Y E+ V ++ PNV TFN+L+ GF
Sbjct: 199 AIIDSFCKDKLVIDAYDLYSEMI----------------VKKIYPNVVTFNSLIYGFCIV 242
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G ++ + EM+ P+ Y++++L+ C+E +++A + M + VE +VV Y
Sbjct: 243 GQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTY 302
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
+++ G+ + E+ +A+ F + L GV + ++ ++NG C+ VD A+ ++ +M
Sbjct: 303 TSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHL 362
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILK--------ARVVKF--------------- 417
K P T LI LC R+ + D++ A ++ +
Sbjct: 363 KNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDK 422
Query: 418 -----------GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
G+ P +Y L+ GLC+ G++++A ++ +++ KG+ ++ +Y+ I+
Sbjct: 423 AIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMIN 482
Query: 467 GYMKEGNVEMATMLRKEMFEN 487
G KEG + A L +M +N
Sbjct: 483 GLCKEGFFDEALSLLSQMEDN 503
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 159/346 (45%), Gaps = 24/346 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
F F++LI C ++ ++ +V ++ G T N L+ + V
Sbjct: 89 FTFNILINC---FSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNF 145
Query: 219 Y----REVFGLD----------------SDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
+ R+ F LD + A + + ++ ++ VRP+V + A++ F
Sbjct: 146 HDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFC 205
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
++ D++ EM P+ +++ L+ FC +++EA L EM NV +V
Sbjct: 206 KDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVY 265
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+N +I G C+ GE+ +A M GVE + VT+ L++GY +V+ A V+N +
Sbjct: 266 TFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTI 325
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+G P + V+I LC + V EA+ + K +K + P +Y LI GLC+ G+
Sbjct: 326 SLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLK-NMTPNTVTYSSLIDGLCKSGR 384
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ + + E+ +G ++ Y++ ++G K V+ A L +M
Sbjct: 385 ISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKM 430
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 115/250 (46%), Gaps = 10/250 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + FN ++ + F+ +M G +P+ +++++L+ F ++ A +
Sbjct: 51 PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ + D V NT++ G C G++ A F + V++ L+NG C+
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170
Query: 365 AGDVDSAILVYNDMCRK--GF---EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+G+ +A+ + RK G P+ +I C + V +A D+ +VK +
Sbjct: 171 SGETRAAL----QLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVK-KI 225
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
+P ++ LI G C G+++EA+ + EM P++ ++ IDG KEG V+ AT
Sbjct: 226 YPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATS 285
Query: 480 LRKEMFENQV 489
+ M + V
Sbjct: 286 VLSVMIKQGV 295
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 105/227 (46%), Gaps = 22/227 (9%)
Query: 171 VKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG------ 224
VK + K + + + + RG++ V + + +I + + K V ++++E+
Sbjct: 312 VKEVNKAKHVFNTISL---RGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPN 368
Query: 225 -------LDSDATAGIGKDVKRVV-----RVRP-NVHTFNALMVGFYREGAFEKVEDVWV 271
+D +G DV ++ R +P N+ T+N+L+ G + +K +
Sbjct: 369 TVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLT 428
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
+M G +PD +Y+ L+ C+ R+++A+++++++ K ++ Y +I G C+ G
Sbjct: 429 KMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEG 488
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
A +M +G +VT+E L++ + A+ + +M
Sbjct: 489 FFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535
>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 809
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 192/445 (43%), Gaps = 40/445 (8%)
Query: 49 LTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSY 108
+ H NHL + + + T + L+N P LA +F+ + H +Y
Sbjct: 42 INTHYQNPVTNHLFEINTAKVVITLNN-----LRNEPSLAFSYFNQLKESGY-SHDPYTY 95
Query: 109 ATIIHILSRARLIGPARDVIRVALRSPENDPKL-----KLFEVLVKTYRECGSAPFV--F 161
A I+ IL G +R + + + + D L LFE L + V
Sbjct: 96 AAIVRILC---FWGWSRKLDSILMEIIKKDGNLDFGIVNLFEALGDGIANESFSVLVQVS 152
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
D LIK C+ ++ D++ G + ++ +CN L+ + + V IYR+
Sbjct: 153 DALIKVCVASGMFDQ---AFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQ 209
Query: 222 V--FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
+ FGL+ PN +T+ + GF R+G + DV+ +M G
Sbjct: 210 LKAFGLN------------------PNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVT 251
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P+ +SY+ + C R K+ +++ + + DV AY +I GFC ++ AE
Sbjct: 252 PNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESI 311
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
REM G + L++GYC G++ A+ ++++M KG + + ++ L
Sbjct: 312 LREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQ 371
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
E + K K G+F E Y ++ LC+ GK+EEA+++ EM GK P +
Sbjct: 372 MGMASEVANQFK-EFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDII 430
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ I GY +G V A + +EM
Sbjct: 431 NYTTVISGYFLKGKVVDALNIYREM 455
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 14/260 (5%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ ++A++ G+ K + + +++ G S+ L+ C E +A L E
Sbjct: 530 LENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLE 589
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M N+ ++ Y+ +IG + GEM +A+ F + G+ +T+ ++NGYCR
Sbjct: 590 TMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMN 649
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELC--DKRRVFEALDILKAR----------- 413
+ A V DM +G EP+ T VL+ D R +LD +K++
Sbjct: 650 KMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWS 709
Query: 414 -VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ + P Y LI C+ +++A+ + EM+ +G P Y+A + GY G
Sbjct: 710 EMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVG 769
Query: 473 NVEMATMLRKEMFENQVRQE 492
N++ A +L EM +R +
Sbjct: 770 NIKKAVVLFDEMLNKGIRPD 789
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 30/265 (11%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+ N ++++ G + G +V + + E ++G D Y+V+M C+ ++ EA
Sbjct: 355 VKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAV 414
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM+ K + D++ Y T+I G+ G++ A +REM G + VT+ L G+
Sbjct: 415 ELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGF 474
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC------DKRRVFEALD-------- 408
R G A+ + N M +G +P+ T ++I LC D + F+ L+
Sbjct: 475 SRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLENYS 534
Query: 409 ----------------ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
L R+ K G + S+ L+ LC EG E+AL + MV
Sbjct: 535 AMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVAL 594
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMA 477
P++ +YS I + G +E A
Sbjct: 595 NINPTMIMYSKVIGALFQAGEMEKA 619
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA-------------- 290
P+V T+ ++ G+ R ++ V +M G EPD +Y+VL+
Sbjct: 633 PDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSL 692
Query: 291 -VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
+ M + LW EM+D +++ DV+ Y +I C+ + A F EM G+
Sbjct: 693 DAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLA 752
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+VT+ L++GYC G++ A++++++M KG P+ T+ VL
Sbjct: 753 PDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 104/249 (41%), Gaps = 46/249 (18%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V +AL+ G F++ DV ++ G P S + LM E R++
Sbjct: 149 VQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKV-------- 200
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+MA A +R++ G+ + T+ + G+CR G
Sbjct: 201 -------------------------DMAIA--IYRQLKAFGLNPNDYTYTIAIKGFCRKG 233
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV---FEAL-DILKARVVKFGLFPT 422
++ AI V+ DM G P + I LC R F+ L D++ A++ P
Sbjct: 234 NLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKI------PM 287
Query: 423 EK-SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ +Y +I+G C E K++EA + EM +GF P + +Y A I GY GN+ A L
Sbjct: 288 DVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALH 347
Query: 482 KEMFENQVR 490
EM V+
Sbjct: 348 DEMVSKGVK 356
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 20/233 (8%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+F L+ EG EK + M L P YS ++ + M +A+ ++ +
Sbjct: 567 SFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNML 626
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
D+ + DV+ Y +I G+C + +M A +M G+E +T+ L+N C D+
Sbjct: 627 VDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNN-CSKIDL 685
Query: 369 -----------------DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
D + L +++M +P+ VLI + C + +A+++
Sbjct: 686 RSSSSSLDAMKSKENMMDPSAL-WSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFN 744
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
++ GL P +Y L+ G C G +++A+ + EM+ KG P S
Sbjct: 745 -EMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 135/271 (49%), Gaps = 14/271 (5%)
Query: 215 GYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
++ Y VFG +S +PN+ T+N ++ + G ++ D + EM
Sbjct: 179 AFKFYLHVFGANSKG-------------FQPNLLTYNLIIKALCKLGQIDRAVDTFREMP 225
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
C PD ++YS LM C+ERR+ EA L +EM+ + + V +N +I + G+++
Sbjct: 226 LKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLS 285
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
RA + M L G + VT+ L++G C G +D A+ + M P T +I
Sbjct: 286 RAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTII 345
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
L +RR + + IL + + + G E Y LI GL +EGK E A+++ EM KG
Sbjct: 346 NGLVKQRRAEDGVHILMS-MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGC 404
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+P++ +Y AFIDG ++ + A + +EM
Sbjct: 405 KPNVVVYGAFIDGLCRDEKPDEAEDILQEML 435
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 118/244 (48%), Gaps = 3/244 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+ ++ G ++ E + + M G + + Y YS L++ +E + A +L
Sbjct: 336 PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRL 395
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W+EM +K + +VV Y I G C + AE+ +EM G ++ T+ L+ G+ +
Sbjct: 396 WKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFK 455
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GD AILV+ +M + VL+ LC+ R+ EAL + ++ GL P
Sbjct: 456 KGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVW-THMLGEGLKPDVV 514
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGK--GFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +IKGLC+ G +++ LK+ EM + P + Y+ + ++ N+ A L
Sbjct: 515 AYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLN 574
Query: 483 EMFE 486
M +
Sbjct: 575 SMLD 578
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 177/456 (38%), Gaps = 78/456 (17%)
Query: 69 LTPTQFSQI--ALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARD 126
LT T F I A G + P A+ FF + CK ++ S+ ++++++ +
Sbjct: 122 LTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQ--------- 172
Query: 127 VIRVALRSPENDPKLKL-FEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDI 183
E D F + V G P ++L+IK ++ I++ VD
Sbjct: 173 ---------EGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDR---AVDT 220
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRV 243
R + + + V T + L+ G+ + VF LD G
Sbjct: 221 FREMPLKNCNPDVFTYSTLM------NGLCKERRVDEAVFLLDEMQAEG----------C 264
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
PN TFN L+ + G + + M GC P+ +Y+ L+ C + ++ +A
Sbjct: 265 LPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALS 324
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L E+M + V Y TII G + M G +++ + L++G
Sbjct: 325 LLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLF 384
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G ++A+ ++ +M KG +P I LC + EA DIL+ + K G P
Sbjct: 385 KEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK-GFLPNA 443
Query: 424 KSYMFLIK-----------------------------------GLCEEGKMEEALKVQAE 448
+Y L+K GLCE G++ EAL V
Sbjct: 444 FTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTH 503
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
M+G+G +P + YS+ I G G+V+ L EM
Sbjct: 504 MLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 539
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 1/224 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+ N + +++L+ G ++EG E +W EMA GC+P+ Y + C + + EAE
Sbjct: 370 KANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAED 429
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ +EM K + Y++++ GF + G+ +A ++EM + + V L+NG C
Sbjct: 430 ILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLC 489
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL-KARVVKFGLFPT 422
+G + A+ V+ M +G +P+ +I LCD V + L + + + + P
Sbjct: 490 ESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPD 549
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+Y L LC + + A+ + M+ +G +P + F++
Sbjct: 550 VVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLE 593
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 98/257 (38%), Gaps = 39/257 (15%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
EK + DI++ ++S+G T ++L+ + +++E+ D
Sbjct: 422 EKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQD-------- 473
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+R NV + L+ G G + VW M G +PD +YS ++ C+
Sbjct: 474 --------MRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCD 525
Query: 295 ERRMREAEKLWEEM--RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
+ + KL+ EM ++ DVV YN + C + RA + M G + S
Sbjct: 526 VGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDS 585
Query: 353 VT---------------------FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+T + LV + SA+ + +M + PE ST
Sbjct: 586 LTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWS 645
Query: 392 VLIGELCDKRRVFEALD 408
+I C +R+ E +D
Sbjct: 646 RVIQRTCKPKRIRETID 662
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 201/423 (47%), Gaps = 20/423 (4%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFF-----SFTQHKSLCKHSLSSYATIIHILSRARLIGP 123
++P + S + L L+ +P LAL+ F S ++ ++SL SY II L RA++
Sbjct: 75 ISPFRLSSL-LRLQKDPTLALQLFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRAKMFDE 133
Query: 124 ARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLL-----IKCCLEVKNIEKIE 178
++++ + P +F ++ Y F + +C VK++ +
Sbjct: 134 MEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKSVNSL- 192
Query: 179 TCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK 238
+ +L +R L K++ I I+ D DA G+ +++
Sbjct: 193 ----LAALLKNRQLE-KMTQVFVDISNYGSPDACTFNILIHAACLCGDLDAVWGVFDEMQ 247
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL-GCEPDCYSYSVLMAVFCEERR 297
+ V+PNV TF L+ G ++ + +M ++ +P+ Y+ L+ FC
Sbjct: 248 KR-GVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGE 306
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A KL EEM NV+ Y+T+I + G + REMG +G + +VT+
Sbjct: 307 LNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNA 366
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
++NG+C+ D++SA V ++M KG +P+ + +IG LC + ++ +A+D+L+ + +
Sbjct: 367 IINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLED-MPRR 425
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P SY + GLCE +++EA + EM+ KG+ P E + +D +E N+E+
Sbjct: 426 GCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECNMELL 485
Query: 478 TML 480
M+
Sbjct: 486 WMI 488
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 119/244 (48%), Gaps = 3/244 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R + V + N+L+ + EK+ V+V+++ G PD ++++L+ C +
Sbjct: 181 RCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNYG-SPDACTFNILIHAACLCGDLDAV 239
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-GLSGVESSSVTFEHLVN 360
+++EM+ + V+ +VV + T+I G ++ A +M + ++ ++ + L+
Sbjct: 240 WGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIK 299
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G+C G+++ A + +M + + LI L R E DIL+ + + G
Sbjct: 300 GFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILR-EMGENGCK 358
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y +I G C+E +E A +V EMV KG +P + ++ I KEG ++ A L
Sbjct: 359 PDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDL 418
Query: 481 RKEM 484
++M
Sbjct: 419 LEDM 422
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ T+NA++ G +E E V EM GC+PD +S++ ++ C+E ++ +A
Sbjct: 358 KPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMD 417
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L E+M + DV++Y I G CE+ ++ A EM G + + LV+ C
Sbjct: 418 LLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLC 477
Query: 364 RAGDVDSAILVYNDMCR 380
+ +++ ++ N + R
Sbjct: 478 QECNMELLWMILNSLGR 494
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 117/250 (46%), Gaps = 2/250 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAVFCEERRMREAE 302
R ++ +++ ++ R F+++E++ ++ + P + ++A + A
Sbjct: 112 RYSLLSYDLIISKLGRAKMFDEMEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAF 171
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++E + + V + N+++ + ++ + + F ++ G + TF L++
Sbjct: 172 QVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNYG-SPDACTFNILIHAA 230
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C GD+D+ V+++M ++G +P T LI L ++ EAL + + V + + P
Sbjct: 231 CLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPN 290
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y LIKG C G++ A K++ EMV + +YS I K G E + + +
Sbjct: 291 ASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILR 350
Query: 483 EMFENQVRQE 492
EM EN + +
Sbjct: 351 EMGENGCKPD 360
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 111/260 (42%), Gaps = 3/260 (1%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
D I + +K+ R P+ F ++ + R ++ V+ + C+ S +
Sbjct: 132 DEMEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKSVNS 191
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+A + R++ + +++ ++ + D +N +I C G++ F EM G
Sbjct: 192 LLAALLKNRQLEKMTQVFVDISNYG-SPDACTFNILIHAACLCGDLDAVWGVFDEMQKRG 250
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR-KGFEPEGSTIEVLIGELCDKRRVFEA 406
V+ + VTF L+ G + A+ + DM + +P S LI C + A
Sbjct: 251 VKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFA 310
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
LK +V + Y LI L + G+ EE + EM G +P Y+A I+
Sbjct: 311 FK-LKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIIN 369
Query: 467 GYMKEGNVEMATMLRKEMFE 486
G+ KE ++E A + EM E
Sbjct: 370 GHCKENDLESAHRVMDEMVE 389
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 156/304 (51%), Gaps = 17/304 (5%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+V ++ RGL V V LI + + ++ E++ E+ V R
Sbjct: 242 LVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEM--------------VNR--G 285
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN+ T ALM G+ +G + +++ + G + D ++Y+V + +C+ R+R+A
Sbjct: 286 YEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAV 345
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++++EM + V ++V YN++I C+ GE++ A E + M SG+ VT L++G
Sbjct: 346 RVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGL 405
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++ +D AIL++N + G P+ + +LI C RR+ EA+++L+ +K L P
Sbjct: 406 CKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLK-NLVPH 464
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI GLC G++ A ++ EM KG P YS +D K+ +++ A L
Sbjct: 465 IVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFN 524
Query: 483 EMFE 486
+M +
Sbjct: 525 QMIK 528
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 135/313 (43%), Gaps = 50/313 (15%)
Query: 206 VSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEK 265
+ R V G+E Y E+ G V PN T+ +L+ G G F +
Sbjct: 195 LCRNGFVDEGFEFYNEMMGNG----------------VCPNEFTYGSLIRGLCGVGKFLE 238
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
+ EM R G + Y ++VL+ C+ + EA ++++EM ++ E ++V ++G
Sbjct: 239 GFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMG 298
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
G+C G + A E F +G G + T+ ++GYC+ G V A+ V+++MCR+G P
Sbjct: 299 GYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVP 358
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKA--------------------------------- 412
T LI LC V A +I+K
Sbjct: 359 NIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLF 418
Query: 413 -RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
++V+ GL P SY LI G C +M EA+ + +M K P + YS IDG +
Sbjct: 419 NQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRS 478
Query: 472 GNVEMATMLRKEM 484
G + A L EM
Sbjct: 479 GRISNAWRLLNEM 491
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 145/312 (46%), Gaps = 32/312 (10%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK-------- 238
+++RG + TC AL+ G + ++ RE+F D+ G +DV
Sbjct: 281 MVNRGYEPNIVTCTALM----GGYCLKGNVDMARELF--DAIGEWGFKRDVWTYNVFIHG 334
Query: 239 --RVVRVR---------------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
+V RVR PN+ T+N+L+ + G ++ M R G PD
Sbjct: 335 YCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPD 394
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
+ +L+ C+ +R+ +A L+ ++ + + DV +Y +I G C M A R
Sbjct: 395 IVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLR 454
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
+M L + VT+ L++G CR+G + +A + N+M KG P+ T +L+ L K+
Sbjct: 455 DMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQ 514
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ EA+ L +++K GL P Y +I G C+ +++EA+ + EM K P + Y
Sbjct: 515 HLDEAV-FLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTY 573
Query: 462 SAFIDGYMKEGN 473
+ + K G+
Sbjct: 574 TILFNAVFKSGS 585
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 1/245 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+ NV ++ ++ R G ++ + + EM G P+ ++Y L+ C + E
Sbjct: 181 VKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGF 240
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM + ++ V + +I G C+ G + A E F EM G E + VT L+ GY
Sbjct: 241 GLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGY 300
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G+VD A +++ + GF+ + T V I C RV +A+ + + + G+ P
Sbjct: 301 CLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFD-EMCREGVVPN 359
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI LC+ G++ A ++ M G P + +DG K ++ A +L
Sbjct: 360 IVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFN 419
Query: 483 EMFEN 487
++ E+
Sbjct: 420 QLVES 424
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 111/238 (46%), Gaps = 13/238 (5%)
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
F+ G ++ ++ + G D + + ++ C + +A + +E+ + +
Sbjct: 82 FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSG--------VESSSVTFEHLVNGYCRAGDV 368
V+Y +I G CE G + A R + V+ + V + +++ CR G V
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D YN+M G P T LI LC + E ++ +++ GL + +
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVD-EMIRRGLDVSVYVFTV 260
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI GLC+ G + EA ++ EMV +G+EP++ +A + GY +GNV+MA +E+F+
Sbjct: 261 LIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMA----RELFD 314
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 46/207 (22%)
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
F +G ++ + F ++ G +V ++ G C G V A+ ++++ GF
Sbjct: 82 FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141
Query: 387 GSTIEVLIGELCDKRRVFEALDIL----------------KARVVKF------------- 417
+ +LI LC+ RV EA+++L K VV +
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201
Query: 418 -------------GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
G+ P E +Y LI+GLC GK E + EM+ +G + S+ +++
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261
Query: 465 IDGYMKEGNVEMATMLRKEMFENQVRQ 491
IDG K G + A +EMF+ V +
Sbjct: 262 IDGLCKNGMLVEA----REMFDEMVNR 284
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 124/251 (49%), Gaps = 4/251 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAVFCEERRMREA 301
+ P+V TFN+L+ + G D++ EM R G PD Y+++ L+ FC+ + EA
Sbjct: 169 ISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEA 228
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM--GLSGVESSSVTFEHLV 359
+++++M + DVV YNTII G C G++ A M + V + V++ LV
Sbjct: 229 FRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLV 288
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
GYC ++D A+LV++DM +G +P T LI L + R E DIL F
Sbjct: 289 RGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTT 348
Query: 420 F-PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
F P ++ LIK C+ G ++ A+KV EM+ P YS I + A
Sbjct: 349 FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAE 408
Query: 479 MLRKEMFENQV 489
L E+FE +V
Sbjct: 409 TLFNELFEKEV 419
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 196/452 (43%), Gaps = 73/452 (16%)
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKL--K 142
P LRFF + +K H S+ ++ L RAR + AR+ + R KL +
Sbjct: 81 PADGLRFFDWVSNKGF-SHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDR 139
Query: 143 LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNI---EKIETCVDIVRMLMSRGLSVKVSTC 199
F L+++Y G +F +K +K + + T ++ +L+ RG +
Sbjct: 140 YFNSLIRSYGNAG----LFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRG---RTGMA 192
Query: 200 NALIWEVSRGKGVISGYEIYREV---FGLDS--DATAGIGKDVKRVVRVRPNVHTFNALM 254
+ L E+ R GV + + F +S D I KD++ + P+V T+N ++
Sbjct: 193 HDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDME-LYHCNPDVVTYNTII 251
Query: 255 VGFYREGAFEKVEDVWVEMARLGCE--PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
G R G + +V M + + P+ SY+ L+ +C ++ + EA ++ +M +
Sbjct: 252 DGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRG 311
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES------SSVTFEHLVNGYCRAG 366
++ + V YNT+I G + E R +E +++ + G ++ + TF L+ +C AG
Sbjct: 312 LKPNAVTYNTLIKG---LSEAHRYDEI-KDILIGGNDAFTTFAPDACTFNILIKAHCDAG 367
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR------------------------ 402
+D+A+ V+ +M P+ ++ VLI LC +
Sbjct: 368 HLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECK 427
Query: 403 --------VFEAL---------DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+FE L + + +++K G+ SY LI G C EGK + A ++
Sbjct: 428 PLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFKPAYEL 486
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
M+ + F P LE Y IDG +K G +A
Sbjct: 487 LVLMLRREFVPDLETYELLIDGLLKIGEALLA 518
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 91/490 (18%), Positives = 175/490 (35%), Gaps = 138/490 (28%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN-DPKLKLFEVLVKTYRECGSAPF 159
C + +Y TII L RA + A +V+ L+ + P + + LV+ Y
Sbjct: 240 CNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGY-------- 291
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG------KGVI 213
C++ ++I+ V + ++SRGL T N LI +S K ++
Sbjct: 292 --------CMK----QEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL 339
Query: 214 SGYEIYREVFGLDS----------------DATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
G F D+ DA + +++ + ++ P+ +++ L+
Sbjct: 340 IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNM-KLHPDSASYSVLIRTL 398
Query: 258 YREGAFEKVEDVWVEM----ARLG---CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
F++ E ++ E+ LG C+P +Y+ + C + ++AEK++ ++
Sbjct: 399 CMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMK 458
Query: 311 KNVEH----------------------------------DVVAYNTIIGGFCEIGEMARA 336
+ V+ D+ Y +I G +IGE A
Sbjct: 459 RGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLA 518
Query: 337 EEFFREMGLSGVESSSVTFEHLV----------NGYC----------------------- 363
+ + M S + TF ++ +C
Sbjct: 519 HDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRL 578
Query: 364 --RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ + A L+ + G+ + +E L+G LC+ R++ +A ++ LF
Sbjct: 579 LFSSAQKEKAFLIVRLLYDNGYLVK---MEELLGYLCENRKLLDAHTLV--------LFC 627
Query: 422 TEKSYMF-------LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
EKS M +I+GLC+ + EA + E+V G L + + G
Sbjct: 628 LEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKW 687
Query: 475 EMATMLRKEM 484
E + K M
Sbjct: 688 EELQFVSKRM 697
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 139/539 (25%), Positives = 227/539 (42%), Gaps = 81/539 (15%)
Query: 18 PKPQLLSQFSTSSSTPPSDQSHNLIATVVS-LLTHHRSKSRWNHLLSLCRSGLTPTQFSQ 76
P ++ S + S+ PS + + IA +S L +KS L S L+
Sbjct: 6 PDERMWSNLKKAFSSNPSLKLNQEIAGKISKTLVSSGAKS-----LQTTPSLLSSLNSQT 60
Query: 77 IALGLKNNPHLA---LRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDV-----I 128
+ L L N+ A L FF F + K+ K L +Y T+I L R+R I
Sbjct: 61 VHLILSNHILTAESCLDFFHFIR-KNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEI 119
Query: 129 RVALRSPENDPKLKLFEVLVKTY-------RECGSAPF---VFDLLIKCCLEVKNIEKIE 178
R D L++ ++ + +C A F FDLL + + K +
Sbjct: 120 RHLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVYADNKMFGE-- 177
Query: 179 TCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA------- 231
++ + +G + +C + + RG V S +R + LD + T
Sbjct: 178 -ALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVL 236
Query: 232 -GIGK-----------DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
G+ K D V+ NV T+NA + G+++ V ++ M + G
Sbjct: 237 DGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVA 296
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
+ +Y++L+ F ++ EA++L+EEMR+K +E DV Y +II C G + RA
Sbjct: 297 CNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVL 356
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F EM G+ S+ T+ L++G C+AG +++A ++ N+M KG + LI C+
Sbjct: 357 FDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 416
Query: 400 KRRVFEALDI----------------------------------LKARVVKFGLFPTEKS 425
V EAL + L +V+ G+ P S
Sbjct: 417 SGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMS 476
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ LI C+EG EA +V EM KG P++ Y+ IDGY K GN++ A L+ E+
Sbjct: 477 FTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 535
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 124/249 (49%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ HT+ AL+ G + G E + + EM G + + ++ L+ +CE + EA +L
Sbjct: 367 PSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRL 426
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M K +E DV AYN+I G C++ A+ M GV ++++F L++ YC+
Sbjct: 427 QVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCK 486
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ A V+ +M KG P T VLI + + EA LK + GL P
Sbjct: 487 EGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK-LKDELENRGLIPDVY 545
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ LI G C +GK++ ALK+ EM +G P++ Y+A I G K+G E A L EM
Sbjct: 546 TCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEM 605
Query: 485 FENQVRQED 493
E + +D
Sbjct: 606 KETGLTPDD 614
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 154/331 (46%), Gaps = 22/331 (6%)
Query: 137 NDPKLKLFEVLVKTYRECG--SAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSV 194
N K++ + L + RE G + +V+ +I C N+++ D + +GL
Sbjct: 311 NIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFD---EMTDKGLIP 367
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALM 254
T ALI V + + + + E+ G G D+ V+ FN L+
Sbjct: 368 SAHTYGALIHGVCKAGQMEAAQMLVNEM--------QGKGIDLNPVI--------FNTLI 411
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
G+ G ++ + V M + G E D ++Y+ + + C+ R EA+ L M ++ V
Sbjct: 412 DGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVS 471
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
+ +++ T+I +C+ G A+ FREM G + +T+ L++GY + G++ A +
Sbjct: 472 PNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKL 531
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
+++ +G P+ T LI C +V AL + + + GL P +Y +I GL
Sbjct: 532 KDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFD-EMPQRGLVPNVVTYTAMISGLS 590
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
++G+ EEA K+ EM G P +YS+ +
Sbjct: 591 KDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 83/155 (53%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN +F L+ + +EG F + + V+ EM G P+ +Y+VL+ + + M+EA
Sbjct: 470 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 529
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL +E+ ++ + DV ++I G C G++ A + F EM G+ + VT+ +++G
Sbjct: 530 KLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGL 589
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+ G + A +Y++M G P+ + L+G L
Sbjct: 590 SKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 135/249 (54%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV TF+AL+ F +EG + ++++ EM G PD +YS L+ FC+E R+ EA ++
Sbjct: 312 PNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQM 371
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M K E ++V Y+ +I +C+ + F E+ G+ + +VT+ LV G+C+
Sbjct: 372 LDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQ 431
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G ++ A ++ +M +G P T +L+ LCD + +AL+I + ++ K +
Sbjct: 432 SGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFE-KMQKSRMILGIG 490
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y +I G+C K+++A + + KG +P + Y+ I G K+G++ A ML ++M
Sbjct: 491 IYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKM 550
Query: 485 FENQVRQED 493
E+ D
Sbjct: 551 KEDGCAPSD 559
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 122/244 (50%), Gaps = 5/244 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ +V ++ ++ ++G + ++ EM G + D +YS ++ C + R +
Sbjct: 240 IKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGA 299
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+ EM +N+ +VV ++ +I F + G++ A+E + EM G+ ++T+ L++G+
Sbjct: 300 KMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGF 359
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ + A + + M KG EP T +LI C +RV + + + GL
Sbjct: 360 CKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLF-CEISSKGLVAD 418
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L++G C+ GK+ A ++ EMV +G PS+ Y +DG G ++ A
Sbjct: 419 TVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKAL---- 474
Query: 483 EMFE 486
E+FE
Sbjct: 475 EIFE 478
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 3/249 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
S+A A + + V+ ++ RPNV T N L+ G +G + + M + GCE + +Y
Sbjct: 156 SEAVALVDRMVE--MKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYG 213
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ C+ A L+ +M +++++ VV Y+ +I C+ G + A F EM +
Sbjct: 214 PVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMK 273
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+++ V + ++ G C G D + +M + P T LI + ++ EA
Sbjct: 274 GIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEA 333
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
++ V + G+ P +Y LI G C+E ++ EA ++ MV KG EP++ YS I+
Sbjct: 334 KELYNEMVAR-GIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILIN 392
Query: 467 GYMKEGNVE 475
Y K V+
Sbjct: 393 SYCKAKRVD 401
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 118/236 (50%), Gaps = 1/236 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TF+ L+ GF EG + + M + P+ + + L+ C + R+ EA L
Sbjct: 137 PNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVL 196
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M E + + Y ++ C+ G A A + FR+M +++S V + +++ C+
Sbjct: 197 IDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCK 256
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G++D A+ ++N+M KG + + +IG LC+ R + +L+ + + + P
Sbjct: 257 DGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGR-NIIPNVV 315
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
++ LI +EGK+ EA ++ EMV +G P YS+ IDG+ KE + A +
Sbjct: 316 TFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQM 371
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 119/242 (49%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ N++T N ++ F R+ V + G EP+ ++S L+ FC E R+ EA
Sbjct: 100 IEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAV 159
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L + M + +VV NT+I G C G + A M G E++ +T+ ++N
Sbjct: 160 ALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRM 219
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++G+ A+ ++ M + + ++I LC + +AL + +K G+
Sbjct: 220 CKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMK-GIKAD 278
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I GLC +G+ ++ K+ EM+G+ P++ +SA ID ++KEG + A L
Sbjct: 279 VVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYN 338
Query: 483 EM 484
EM
Sbjct: 339 EM 340
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 1/205 (0%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P +S L + + +EM +EH++ N +I FC ++ A
Sbjct: 67 PSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSV 126
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
G E +++TF L+NG+C G V A+ + + M + P T+ LI LC
Sbjct: 127 VGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCL 186
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
K RV EAL +L R+VK+G E +Y ++ +C+ G AL + +M + + S+
Sbjct: 187 KGRVTEAL-VLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVV 245
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEM 484
YS ID K+GN++ A L EM
Sbjct: 246 QYSIVIDSLCKDGNLDDALSLFNEM 270
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 122/261 (46%), Gaps = 18/261 (6%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
++ +++S+G + T + LI + K V +G ++ E+ ++ G+ D
Sbjct: 371 MLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEI------SSKGLVADT----- 419
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
T+N L+ GF + G ++++ EM G P +Y +L+ C+ +++A
Sbjct: 420 -----VTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKAL 474
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++E+M+ + + YN II G C ++ A F + + GV+ +T+ ++ G
Sbjct: 475 EIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGL 534
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G + A +++ M G P T +LI V ++++++ +K F
Sbjct: 535 CKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEE--MKMRGFAA 592
Query: 423 EKSYMFLIKGLCEEGKMEEAL 443
+ S + ++ + +G++++
Sbjct: 593 DASTIKMVVVMLSDGRLDKTF 613
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 128/249 (51%), Gaps = 2/249 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VR V +FN ++ G R G + E + M+ G PD Y+Y L+ C R+ +A
Sbjct: 271 VRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDAR 330
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++E+M + ++ + V + +I C+ G+ E REM GV +VT+ +VNG
Sbjct: 331 GVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGL 390
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRA D+ SA + +M G P+ T LI C + + A++I K +V G+
Sbjct: 391 CRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEI-KQNMVAEGVGLD 449
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E +Y LI GL + G+ +A +V EM+ G EP Y+ ID + ++G+V+ L K
Sbjct: 450 EVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK 509
Query: 483 EMFENQVRQ 491
EM +N+ R+
Sbjct: 510 EM-QNKGRK 517
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 154/354 (43%), Gaps = 38/354 (10%)
Query: 139 PKLKLFEVLVKTYRECG---SAPFVFD---------------LLIKCCLEVKNIEKIETC 180
P+ KLF VL++ G SA VFD +I +++ ET
Sbjct: 238 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAET- 296
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
+ R + G++ V T ALI + R + E R VF + G G
Sbjct: 297 --LHRRMSEAGVTPDVYTYGALIQGLCR----VGRIEDARGVF----EKMCGRG------ 340
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
++PN F L+ ++G E + ++ EM G PD +Y+ ++ C R ++
Sbjct: 341 --MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKS 398
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A + EMR + D V Y T+I G+C+ E+ A E + M GV VT+ L++
Sbjct: 399 ASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALIS 458
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G +AG A V +M G EP+ +T ++I C K V L +LK K G
Sbjct: 459 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNK-GRK 517
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
P +Y ++ G C+ G+M+ A + M+ G P Y+ +DG+ K G V
Sbjct: 518 PGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV 571
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 36/193 (18%)
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
EA + ++ D + + +N ++ +GE+A A+ F EM GV + V+F ++
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+G CRAGD+D A ++ RR+ EA G+
Sbjct: 283 SGMCRAGDLDGAETLH-------------------------RRMSEA-----------GV 306
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI+GLC G++E+A V +M G+G +P+ +++ ID + K+G+ E
Sbjct: 307 TPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLE 366
Query: 480 LRKEMFENQVRQE 492
L +EM E VR +
Sbjct: 367 LHREMRERGVRPD 379
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 207/463 (44%), Gaps = 47/463 (10%)
Query: 34 PSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS-GLTP--TQFSQIALGLKNNPHL--A 88
P S+N + + SL RS+ + LL + + G +P ++ + GL + A
Sbjct: 234 PDAFSYNTV--IKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKA 291
Query: 89 LRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
F+ K + + ++ Y +I+H L +AR + A V+R + P + ++
Sbjct: 292 CNLFNEMVQKGVVPNVVT-YNSIVHALCKARAMDKAELVLR-QMFDNSIQPDEVTYTAMI 349
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
Y G + + + + + GL + T N+L+ + +
Sbjct: 350 HGYSCLG--------------------RWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCK 389
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVED 268
K EI+ + AT G +P++ +++ L+ G+ EG F + +
Sbjct: 390 HKRSKEAAEIFHSI------ATKG----------HKPDIISYSILLHGYATEGRFVDMNN 433
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
++ M G D + +++L+ + M EA ++ EMR + V +VV Y T+I C
Sbjct: 434 LFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALC 493
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF-EPEG 387
+G +A A E +M G++ ++V + L+ G+C GD+ A + ++M +G P
Sbjct: 494 RMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNI 553
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+ +I LC++ RV A D+ V+ G P ++ LI G C GKM++A V
Sbjct: 554 TFFSSIIHSLCNEGRVMNAQDVFNL-VIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLD 612
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
MV G EP + YS I+GY K G ++ +L +EM +V+
Sbjct: 613 AMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVK 655
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 113/231 (48%), Gaps = 1/231 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RP++ TFN+L+ G+ G +K V M G EPD +YS L+ + + R+ +
Sbjct: 585 RPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLI 644
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+ EM K V+ V Y+ ++ G G + A++ F EM SG S T+ ++ G C
Sbjct: 645 LFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLC 704
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R D AI +++ + + E + + +I L +R EA D+ A V GL P
Sbjct: 705 RNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLF-ASVSASGLVPNA 763
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+Y +I L +EG +EEA + + M G PS + + I +++G +
Sbjct: 764 STYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEI 814
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 2/218 (0%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREA-EKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
M+ LGC PD +SY+ ++ C R +EA + L + DVV+Y +I G G
Sbjct: 227 MSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEG 286
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
E+++A F EM GV + VT+ +V+ C+A +D A LV M +P+ T
Sbjct: 287 EISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+I R EA + K + + GL P ++ L+ LC+ + +EA ++ +
Sbjct: 347 AMIHGYSCLGRWKEAAKMFK-EMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIAT 405
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
KG +P + YS + GY EG L M +N +
Sbjct: 406 KGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 119/244 (48%), Gaps = 7/244 (2%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPN+ F++++ EG +DV+ + +G PD ++++ L+ +C +M +A
Sbjct: 550 RPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFG 609
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ + M E DVV Y+T+I G+ + G + FREM V+ ++VT+ +++G
Sbjct: 610 VLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLF 669
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVKFGLF 420
RAG +A ++++M G ST +++ LC EA+ + L A +KF +
Sbjct: 670 RAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIA 729
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+I L + + EEA + A + G P+ Y I +KEG+VE A ++
Sbjct: 730 ILNT----MIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIM 785
Query: 481 RKEM 484
M
Sbjct: 786 FSSM 789
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 1/189 (0%)
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EE + V V Y ++ C FF + +G+ + + + C A
Sbjct: 154 EEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYA 213
Query: 366 GDVDSAI-LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D A+ ++ + M G P+ + +I LC R EALD+L G P
Sbjct: 214 KRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVV 273
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
SY +I GL EG++ +A + EMV KG P++ Y++ + K ++ A ++ ++M
Sbjct: 274 SYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQM 333
Query: 485 FENQVRQED 493
F+N ++ ++
Sbjct: 334 FDNSIQPDE 342
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/366 (19%), Positives = 147/366 (40%), Gaps = 57/366 (15%)
Query: 61 LLSLCRSGLTPT---QFSQ-IALGLKNNPHLALRFF-SFTQHKSLCKH------------ 103
+ +LCR G + SQ I++GLK N + F H L K
Sbjct: 489 IAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGI 548
Query: 104 ---SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
+++ +++IIH L + A+DV + + + P + F L+ Y
Sbjct: 549 PRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDR-PDIFTFNSLIDGY--------- 598
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
CL + K++ ++ ++S G V T + LI + + G ++R
Sbjct: 599 -------CL----VGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFR 647
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
E+ RV+P T++ ++ G +R G + ++ EM G
Sbjct: 648 EML----------------CKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAM 691
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+Y++++ C EA L+ ++ N++ ++ NT+I ++ A + F
Sbjct: 692 SISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLF 751
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
+ SG+ ++ T+ ++ + G V+ A ++++ M + G P + +I L K
Sbjct: 752 ASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQK 811
Query: 401 RRVFEA 406
+ +A
Sbjct: 812 GEIVKA 817
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 186/426 (43%), Gaps = 46/426 (10%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRAR----LIGPA 124
L+P ++ L N LAL FF + + + KH+ SY +I L + + +
Sbjct: 120 LSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLV 179
Query: 125 RDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIV 184
D+ R + S E F ++ + Y K++ V+
Sbjct: 180 SDMKRKGILSRET------FALITRRYARA--------------------RKVKEAVESF 213
Query: 185 RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVR 244
+ G + VS N L+ + + + V E++ D + R +
Sbjct: 214 EKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVF----------------DKMKHGRFK 257
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ ++ L+ G+ ++ K+ +V+ EM G EPD ++ +L+ C+ R+ EA +L
Sbjct: 258 PDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRL 317
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM KN++ + T+I G + A EFF ++ LSG + T+ +V YC
Sbjct: 318 FHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCW 377
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ + A + ++M + G P T ++++ L R+ EA + + + G PT
Sbjct: 378 SMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLS 437
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I+ C E +++ A+++ EM KG P + ++S I+ E +E A +EM
Sbjct: 438 TYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEM 497
Query: 485 FENQVR 490
+ +R
Sbjct: 498 LDVGIR 503
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 112/249 (44%), Gaps = 22/249 (8%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
+I ++ + D ++LF + + +P VF LI + + ++++ ++
Sbjct: 301 LINAHCKARKYDEAIRLFHEM--EAKNIKPSPHVFCTLING---LGSEKRLKEALEFFEQ 355
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
L G + + T NA++ + Y + +D +G+G PN
Sbjct: 356 LKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRM------VDEMRKSGVG----------PN 399
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
T++ ++ + ++ V+ M+R GCEP +Y +++ +FC E R+ A ++W
Sbjct: 400 SRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIW 459
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM+ K V + ++T+I C ++ A +F+EM G+ + F +L
Sbjct: 460 DEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDD 519
Query: 366 GDVDSAILV 374
G D+A+L+
Sbjct: 520 GRKDTALLM 528
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 124/247 (50%), Gaps = 7/247 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+NAL+ G G + ++ M + G PD +Y+ L+ FC+ ++ EA K+
Sbjct: 83 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKI 142
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ + DVV YN +I GFC+ ++ A+ + M + VT+ LVNG C+
Sbjct: 143 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCK 202
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G VD A ++ D KGF P T LI LC + R E+ L ++V G P
Sbjct: 203 NGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIV 259
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
SY LI GL E + EALK+ ++ +G+EP + Y+ IDG +KE V A E+
Sbjct: 260 SYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAF----EL 315
Query: 485 FENQVRQ 491
F V+
Sbjct: 316 FSGLVKH 322
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 153/318 (48%), Gaps = 20/318 (6%)
Query: 172 KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA 231
+ + ++E+ ++ ++ G + + NALI ++R +GV +++ V +
Sbjct: 234 RELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYE--- 290
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
P V T+N L+ G +E + +++ + + G EPD +Y+V +
Sbjct: 291 -------------PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDG 337
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+ R+ +A + ++M +K DVV++N +I G C+ + AE M G +
Sbjct: 338 LCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPN 397
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR---RVFEALD 408
+++F L+ G CRAG A+ + +M ++G +P T +L+ LC R R+ EA+
Sbjct: 398 AISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAIT 457
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+ A + K G P +Y LI GL + GK+++A ++ M KG P++ Y++ I G
Sbjct: 458 LFDAMIEK-GRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGL 516
Query: 469 MKEGNVEMATMLRKEMFE 486
V+ A L M E
Sbjct: 517 CGLDKVDEALELFVAMVE 534
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 167/363 (46%), Gaps = 36/363 (9%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
CK + SY +IH L+R + + A + LR +P++ + +L+ +
Sbjct: 254 CKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGY-EPEVPTYNILIDGLLKEDRVNEA 312
Query: 161 FDL---LIKCCLEVKNIE------------KIETCVDIVRMLMSRGLSVKVSTCNALIWE 205
F+L L+K LE I ++E + +++ + +G V + NA+I
Sbjct: 313 FELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVING 372
Query: 206 VSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEK 265
+ + K V E + G+++ + PN +FN L+ G R G ++K
Sbjct: 373 LCKEKRV---DEAEVLLSGMEAKGCS-------------PNAISFNTLICGQCRAGKWKK 416
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEER---RMREAEKLWEEMRDKNVEHDVVAYNT 322
+ EM + G +P +Y++L+ C+ R R++EA L++ M +K DVV Y+
Sbjct: 417 AMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSA 476
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G + G++ A M G + T+ L++G C VD A+ ++ M KG
Sbjct: 477 LIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKG 536
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
P+ T +I LC + V +AL + ++ G+ PT Y LI GLC +++EA
Sbjct: 537 CVPDTITYGTIISALCKQEMVDKALALFDGS-LEAGVVPTSGMYFSLIDGLCAVARVDEA 595
Query: 443 LKV 445
LK+
Sbjct: 596 LKL 598
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 126/247 (51%), Gaps = 5/247 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE-RRMREAEK 303
P+V T+N+L+ G + G +V++ + + G P+ +YS L++ C E RR+ A +
Sbjct: 188 PDVVTYNSLVNGLCKNG---RVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQ 244
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L E+M + D+V+YN +I G ++ A + F + G E T+ L++G
Sbjct: 245 LLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLL 304
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ V+ A +++ + + G EP+ T V I LC RV +AL +LK K G P
Sbjct: 305 KEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK-GCVPDV 363
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
S+ +I GLC+E +++EA + + M KG P+ ++ I G + G + A KE
Sbjct: 364 VSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKE 423
Query: 484 MFENQVR 490
M + V+
Sbjct: 424 MLKRGVK 430
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 2/201 (0%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD Y+ +L+ + ++ +A + E++ K + D+ +N I G C + A+
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTV 72
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F M G + +T+ L++G C G + A +Y M + G+ P+ T L+ C
Sbjct: 73 FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
++ EAL I VK G P +Y LI G C+ K++EA ++ MV + P +
Sbjct: 133 VGKLDEALKIFDG-AVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191
Query: 460 IYSAFIDGYMKEGNVEMATML 480
Y++ ++G K G V+ A ML
Sbjct: 192 TYNSLVNGLCKNGRVDEARML 212
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 116/239 (48%), Gaps = 4/239 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V + NA++ G +E ++ E + M GC P+ S++ L+ C + ++A
Sbjct: 361 PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTT 420
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE---FFREMGLSGVESSSVTFEHLVNG 361
++EM + V+ VV YN ++ G C+ + R +E F M G VT+ L++G
Sbjct: 421 FKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDG 480
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+AG +D A + M KG P T LI LC +V EAL++ A V K G P
Sbjct: 481 LGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEK-GCVP 539
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y +I LC++ +++AL + + G P+ +Y + IDG V+ A L
Sbjct: 540 DTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKL 598
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G++ +A F ++ + G+ S TF ++G CRA + A V++ M + GF P T
Sbjct: 30 GKIEKAHRFVEQLLVKGLCDIS-TFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITY 88
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
L+ LC+ R+ +A L R++K G P +Y L+ G C+ GK++EALK+ V
Sbjct: 89 NALLSGLCNGGRMSDA-QALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAV 147
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+GF P + Y+A I+G+ K ++ A + + M
Sbjct: 148 KRGFVPDVVTYNALINGFCKADKLDEAQRILQRM 181
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 187/410 (45%), Gaps = 30/410 (7%)
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF 144
P AL FF + + +H+ S+A ++H+LSR R ++ L + +++
Sbjct: 70 PATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVS 129
Query: 145 EVLVKTYRECGSA-----PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC 199
++ R GSA P ++ ++ + + E + L+ GL T
Sbjct: 130 ADAIQAIRRTGSARLALSPKCYNFALR---SLARFDMTEYMGRVYSQLVQDGLLPDTVTY 186
Query: 200 NALIWEVSRGKGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
N +I + + + + +R + GL+ P T NAL++G+
Sbjct: 187 NTMIKSYCKEGDLTTAHRYFRLLLEGGLE------------------PETFTCNALVLGY 228
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
R G K +++ M +GC+ + YSY++L+ C+ + +R+A L+ M+ +V
Sbjct: 229 CRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNV 288
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
A+ +I G C+ G + A F M +GV S +T+ ++ GY + G ++ A+ +
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 348
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
M + G P+ T LI LCD++ E + L VK G PT ++ LI G C
Sbjct: 349 MEKNGCHPDDWTYNTLIYGLCDQKT--EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAE 406
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
K ++AL+++ +M+ + L+++ I+ +K+ ++ A L E+ N
Sbjct: 407 KFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISAN 456
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 121/234 (51%), Gaps = 4/234 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN T+N+LM G ++ K + +M + G P+ +Y+ L+ C+E A +
Sbjct: 494 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFR 553
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+E M ++ D AY + C+ G RAEE + + GV + V + L++G+
Sbjct: 554 LFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDGFS 610
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+AG+ D A + M +G P+ T VL+ LC ++R+ EAL IL ++ G+ T
Sbjct: 611 KAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR-GIKCTI 669
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI + EGK + A ++ EM G +PS Y+ FI+ Y KEG +E A
Sbjct: 670 FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDA 723
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 116/266 (43%), Gaps = 50/266 (18%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ GF + G + + M GC PD Y+YSVL+ C+++R+ EA + ++M
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ ++ + AY +I G+ A+ + EM SG + S+ T+ +N YC+ G ++
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLI---GELCDKRRVFEA-------------------- 406
A + M R+G P+ T +LI G + R F
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781
Query: 407 ------------------------LDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
LDI L R+VK GL PT +Y LI G C+ G++
Sbjct: 782 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 841
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFI 465
EEA + M GKG P+ +IY+ I
Sbjct: 842 EEACLLLDHMCGKGLSPNEDIYTLLI 867
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 121/270 (44%), Gaps = 37/270 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+NA++VG+ + G + M + GC PD ++Y+ L+ C+++ EAE
Sbjct: 319 VVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAE 377
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFC---------------------------------- 328
+L + VV + +I G+C
Sbjct: 378 ELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSL 437
Query: 329 -EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
+ + A+E E+ +G+ + +T+ +++GYC++G VD A+ V M R G +P
Sbjct: 438 IKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNA 497
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T L+ L +++ +A+ +L ++ K G+ P +Y L++G C+E + A ++
Sbjct: 498 WTYNSLMYGLVKDKKLHKAMALL-TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFE 556
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
M G +P Y+ D K G E A
Sbjct: 557 MMEQNGLKPDEHAYAVLTDALCKAGRAEEA 586
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 115/221 (52%), Gaps = 5/221 (2%)
Query: 274 ARLGCEPDCYSYSVL-MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
ARL P CY++++ +A F M +++ ++ + D V YNT+I +C+ G+
Sbjct: 142 ARLALSPKCYNFALRSLARFDMTEYM---GRVYSQLVQDGLLPDTVTYNTMIKSYCKEGD 198
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A +FR + G+E + T LV GYCR G++ A ++ M G + + +
Sbjct: 199 LTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTI 258
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI LCD + V +AL +L + + G P +++ FLI GLC+ G++ +A + M
Sbjct: 259 LIQGLCDAKCVRKAL-VLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQN 317
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
G PS+ Y+A I GY K G + A +++ M +N +D
Sbjct: 318 GVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDD 358
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 17/260 (6%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ + + L+ REG + + ++ EM G +P +Y+V + +C+E R+ +AE
Sbjct: 665 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 724
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF----EHL 358
L +M + V DVV YN +I G +G + RA + M + E + T+ +HL
Sbjct: 725 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 784
Query: 359 VNG---YCRAGD---------VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
+ G Y R+ D +D + M + G P +T LI C R+ EA
Sbjct: 785 LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 844
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+L K GL P E Y LIK C+ E+AL + M GF+P LE Y +
Sbjct: 845 CLLLDHMCGK-GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVV 903
Query: 467 GYMKEGNVEMATMLRKEMFE 486
G EG+ E L ++ E
Sbjct: 904 GLCNEGDFEKVKSLFCDLLE 923
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 120/306 (39%), Gaps = 66/306 (21%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P V TF L+ G+ F+ + +M C+ D + L+ ++ R++EA++L
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS------------ 352
E+ + +V+ Y +II G+C+ G++ A E + M G + ++
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509
Query: 353 -----------------------VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
+T+ L+ G C D D+A ++ M + G +P+
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569
Query: 390 IEVLIGELCDKRRVFEALDI-------------------------------LKARVVKFG 418
VL LC R EA L R++ G
Sbjct: 570 YAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 629
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
P +Y L+ LC++ ++ EAL + +M +G + ++ Y+ ID ++EG + A
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 689
Query: 479 MLRKEM 484
+ EM
Sbjct: 690 RMYNEM 695
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 237 VKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
++R+V+ + P V T+++L+ GF + G E+ + M G P+ Y++L+ C+
Sbjct: 813 LERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCD 872
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ +A M + + + +Y ++ G C G+ + + F ++ G V
Sbjct: 873 TKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVA 932
Query: 355 FEHLVNGYCRAGDVD 369
++ L +G +AG VD
Sbjct: 933 WKILNDGLLKAGYVD 947
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 3/144 (2%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M + G P +YS L+A FC+ R+ EA L + M K + + Y +I C+
Sbjct: 816 MVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKF 875
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+A F M G + ++ LV G C GD + ++ D+ G+ + ++
Sbjct: 876 FEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKI 935
Query: 393 LIGELCDKRRV---FEALDILKAR 413
L L V F+ L I++ R
Sbjct: 936 LNDGLLKAGYVDICFQMLSIMEKR 959
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 170/354 (48%), Gaps = 18/354 (5%)
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
++L+ T+ + GS P + + + ++ D+V + S GL V T N
Sbjct: 94 MRLYVTAATTFVDRGSLPMAHEAMRRMVAAFAEAGRLPEAADMVFEMRSHGLPFCVETAN 153
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
W + G S + R+VF D T G + P+ +F AL+VG R+
Sbjct: 154 ---WVLRAGLDTGS-FAYARKVF--DGMVTRG---------GLLPDARSFRALIVGCCRD 198
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G E+V+ + M G D + +V++ VFC++ R R+ +L+ M + +VV Y
Sbjct: 199 GRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNY 258
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
I G C+ + +A EM G++ + T L+NG C+ G + A ++ + +
Sbjct: 259 TAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIK 318
Query: 381 -KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
++P T V+IG C + ++ A ++L R+V+ GL P +Y LI G C+EG
Sbjct: 319 SSSYKPNVHTYTVMIGGYCKEGKLARA-EMLLGRMVEQGLAPNTNTYTTLISGHCKEGSF 377
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
A ++ +M +GF+P++ Y+A IDG K+G ++ A + + M NQ Q D
Sbjct: 378 NCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLR-MANNQGLQLD 430
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 125/246 (50%), Gaps = 1/246 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNVHT+ ++ G+ +EG + E + M G P+ +Y+ L++ C+E A +
Sbjct: 323 KPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFE 382
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +MR + + ++ YN +I G C+ G++ A + R G++ VT+ ++ +C
Sbjct: 383 LMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHC 442
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G + A+ ++N M G P+ T LI C +R++ E+ + + + L PT+
Sbjct: 443 KQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFD-KCLAIELVPTK 501
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++Y +I G C+ GK AL+V MV G + Y A I G KE +E A L +
Sbjct: 502 QTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEG 561
Query: 484 MFENQV 489
M + ++
Sbjct: 562 MLDKRL 567
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 149/314 (47%), Gaps = 22/314 (7%)
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
L++ CC + + +E+++ ++ ++ +G + +TC ++ + E++R +
Sbjct: 191 LIVGCCRDGR-MEEVDA---LLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRM 246
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+ + PNV + A + G + ++ V EM G +P+
Sbjct: 247 LEMGTP----------------PNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNV 290
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
Y+++ L+ C+ A +L+ ++ + + + +V Y +IGG+C+ G++ARAE
Sbjct: 291 YTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLG 350
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
M G+ ++ T+ L++G+C+ G + A + N M R+GF+P T LI LC K
Sbjct: 351 RMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKG 410
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
++ EA +L+ GL + +Y +I C++G + AL + M G P + Y
Sbjct: 411 KIQEAYKVLRM-ANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTY 469
Query: 462 SAFIDGYMKEGNVE 475
+ I Y ++ +E
Sbjct: 470 TTLIARYCQQRQME 483
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 127/284 (44%), Gaps = 47/284 (16%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVE-----------------------------------D 268
+PN++T+NAL+ G ++G ++ D
Sbjct: 393 QPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALD 452
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
++ MA GC PD ++Y+ L+A +C++R+M E++KL+++ + Y ++I G+C
Sbjct: 453 LFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYC 512
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
++G+ A F M +G ++ S+T+ L++G C+ ++ A +Y M K P
Sbjct: 513 KVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEV 572
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
T L E C + + A+ IL + + L++ L G +E+A +
Sbjct: 573 TPVTLAFEYCRREKAVVAVSILD----RLDKRRKNHTVNVLVRKLSAIGHVEDA----SL 624
Query: 449 MVGKGFEPSLEI----YSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+ K + L + Y++FI+ +AT + +++ +Q
Sbjct: 625 FLKKALDVDLAVDRLAYTSFINSCYANKKYALATEISEKISSSQ 668
>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 562
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 145/278 (52%), Gaps = 17/278 (6%)
Query: 225 LDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
LD+DA + V + R+ P+V+T+NAL+ GF G + ++ +M PD Y+
Sbjct: 256 LDNDAFDLYSEMVSK--RIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYT 313
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
+++L+ FC+E R++EA+ M + ++ DVV YN+++ +C + E+ +A+ F M
Sbjct: 314 FNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMS 373
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
GV ++ ++ ++N +C+ VD A+ ++ +M K P T LI LC R+
Sbjct: 374 HRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRIS 433
Query: 405 EALDI---------------LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
AL++ L ++ G+ P +Y LI GLC+ G++E+A + ++
Sbjct: 434 YALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDL 493
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ KG+ ++ Y+ I G+ +G + A L +M +N
Sbjct: 494 LVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDN 531
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 125/261 (47%), Gaps = 21/261 (8%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN+ +N ++ ++ D++ EM PD +Y+ L+ FC ++++A
Sbjct: 237 LQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAI 296
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ +M +N+ DV +N ++ FC+ G + A+ M G++ VT+ L++ Y
Sbjct: 297 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRY 356
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +V+ A ++N M +G + ++I C + V +A+ + K K +FP
Sbjct: 357 CLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHK-QIFPN 415
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEM----------------VGKGFEPSLEIYSAFID 466
+Y LI GLC+ G++ AL++ EM +G P++ Y+ ID
Sbjct: 416 VITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILID 475
Query: 467 GYMKEGNVEMATMLRKEMFEN 487
G K G +E A + +FE+
Sbjct: 476 GLCKGGRLEDA----RNIFED 492
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 147/300 (49%), Gaps = 33/300 (11%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
D+ ++S+ + V+T NALI G ++ ++ GL + T+
Sbjct: 262 DLYSEMVSKRIFPDVNTYNALI----NGFCIVGKL---KDAIGLFNKMTSE--------- 305
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ P+V+TFN L+ F +EG ++ ++ M + G +PD +Y+ LM +C + +A
Sbjct: 306 NINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKA 365
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ ++ M + V +V +Y+ +I FC+I + +A + F+EM + + +T+ L++G
Sbjct: 366 KSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDG 425
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIE----------------VLIGELCDKRRVFE 405
C++G + A+ + ++M +G +P+ T+ +LI LC R+ +
Sbjct: 426 LCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLED 485
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
A +I + +VK G T +Y +I G C +G +EA+ + ++M P+ Y I
Sbjct: 486 ARNIFEDLLVK-GYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIII 544
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 1/191 (0%)
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
R +L + K ++ ++V YNTII C+ A + + EM + T+ L
Sbjct: 223 RAPLQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNAL 282
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+NG+C G + AI ++N M + P+ T +L+ C + RV EA + L A ++K G
Sbjct: 283 INGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGL-AMMMKQG 341
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ P +Y L+ C ++ +A + M +G ++ YS I+ + K V+ A
Sbjct: 342 IKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAM 401
Query: 479 MLRKEMFENQV 489
L KEM Q+
Sbjct: 402 KLFKEMHHKQI 412
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 51/209 (24%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+V T+N+LM + K + ++ M+ G + SYS+++ FC+ + + +A
Sbjct: 342 IKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAM 401
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT-------- 354
KL++EM K + +V+ Y+++I G C+ G ++ A E EM G + +T
Sbjct: 402 KLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQ 461
Query: 355 ----------------------------FEHL---------------VNGYCRAGDVDSA 371
FE L ++G+C G D A
Sbjct: 462 GIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEA 521
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
+ + + M P T E++I L D
Sbjct: 522 MTLLSKMKDNCCIPNAVTYEIIIRSLFDN 550
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 92/225 (40%), Gaps = 36/225 (16%)
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
L+ + CL + ++ I + RG++ V + + +I + K V ++++E+
Sbjct: 352 LMDRYCL----VNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEM 407
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
++ PNV T+++L+ G + G ++ EM G +PD
Sbjct: 408 HH----------------KQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDI 451
Query: 283 ----------------YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
++Y++L+ C+ R+ +A ++E++ K V Y +I G
Sbjct: 452 ITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHG 511
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
FC G A +M + ++VT+E ++ + D A
Sbjct: 512 FCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKA 556
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RPN+ T+ L+ G + G E +++ ++ G +Y+V++ FC + EA
Sbjct: 463 IRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAM 522
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
L +M+D + V Y II + E +AE FF
Sbjct: 523 TLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFF 560
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 121/242 (50%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ V T+ L+ KVE ++ EM D Y Y+ ++ +C MR A
Sbjct: 243 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAA 302
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+ +E VE + Y +I GFC+IG+M AE +M GV + + F +++GY
Sbjct: 303 KVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 362
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G VD A+ + M + G E + T L LC R+ EA +L +++ G+ P
Sbjct: 363 CRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHI-MIEMGVVPN 421
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI C++G M EA ++ EM KG PS+ Y+ IDGY K+G++ A RK
Sbjct: 422 YVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRK 481
Query: 483 EM 484
EM
Sbjct: 482 EM 483
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 155/332 (46%), Gaps = 11/332 (3%)
Query: 169 LEVKNIEKIETCVDIVRMLM-SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDS 227
LE+ E IE V +L+ S + +S AL E+ + V+ +Y V +++
Sbjct: 235 LEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEM-KANNVVGDVYLYTAV--INA 291
Query: 228 DATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
AG + +V+ V PN T+ L+ GF + G E E + +M G +
Sbjct: 292 YCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLN 351
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
++ ++ +C + + +A K+ M VE D+ YNT+ G C + + A+
Sbjct: 352 QIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLH 411
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
M GV + VT+ L++ +C+ GD+ A ++ +M KG P T V+I K
Sbjct: 412 IMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKG 471
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ EA + + + K G P +Y L+ G C GK++ ALK+ EM +G EP++ Y
Sbjct: 472 SIREA-ERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAY 530
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+A I G KEG E A L +M + + +D
Sbjct: 531 TALISGLAKEGRSEAAFQLYDDMLKAGLIPDD 562
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N FN ++ G+ R+G + + M ++G E D Y+Y+ L C R+ EA+ L
Sbjct: 351 NQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLL 410
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M + V + V Y T+I C+ G+M A FREM G S VT+ +++GY +
Sbjct: 411 HIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKK 470
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + A +M +KGF P+ T L+ C +V AL + + + + G P +
Sbjct: 471 GSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFE-EMKQRGTEPNVVA 529
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
Y LI GL +EG+ E A ++ +M+ G P +YSA +
Sbjct: 530 YTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 569
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 7/202 (3%)
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
SV++ C+ R+ +A +L ++M V + + YN+++ + + R +E M
Sbjct: 181 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 240
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRR 402
G+E++ T+ LV+ A D+ ++N+M + +I C + RR
Sbjct: 241 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 300
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ LD V G+ P E++Y LI G C+ G+ME A + A+M G+G + I++
Sbjct: 301 AAKVLD----ECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFN 356
Query: 463 AFIDGYMKEGNVEMATMLRKEM 484
IDGY ++G V+ A ++ M
Sbjct: 357 TMIDGYCRKGMVDDALKIKAAM 378
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 7/170 (4%)
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
+A + ++ G C+ G + A +M GV +++ + L++ Y R D +
Sbjct: 178 LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 237
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRV--FEAL-DILKARVVKFGLFPTEKSYMFLIKGLC 434
M +G E T +L+ L R + EAL + +KA V ++ Y +I C
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVY----LYTAVINAYC 293
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G M A KV E VG G EP+ Y I+G+ K G +E A ML +M
Sbjct: 294 RAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADM 343
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 135/271 (49%), Gaps = 14/271 (5%)
Query: 215 GYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
++ Y VFG +S +PN+ T+N ++ + G ++ D + EM
Sbjct: 155 AFKFYLHVFGANSKG-------------FQPNLLTYNLIIKALCKLGQIDRAVDTFREMP 201
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
C PD ++YS LM C+ERR+ EA L +EM+ + + V +N +I + G+++
Sbjct: 202 LKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLS 261
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
RA + M L G + VT+ L++G C G +D A+ + M P T +I
Sbjct: 262 RAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTII 321
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
L +RR + + IL + + + G E Y LI GL +EGK E A+++ EM KG
Sbjct: 322 NGLVKQRRAEDGVHILMS-MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGC 380
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+P++ +Y AFIDG ++ + A + +EM
Sbjct: 381 KPNVVVYGAFIDGLCRDEKPDEAEDILQEML 411
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 118/244 (48%), Gaps = 3/244 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+ ++ G ++ E + + M G + + Y YS L++ +E + A +L
Sbjct: 312 PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRL 371
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W+EM +K + +VV Y I G C + AE+ +EM G ++ T+ L+ G+ +
Sbjct: 372 WKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFK 431
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GD AILV+ +M + VL+ LC+ R+ EAL + ++ GL P
Sbjct: 432 KGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVW-THMLGEGLKPDVV 490
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGK--GFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +IKGLC+ G +++ LK+ EM + P + Y+ + ++ N+ A L
Sbjct: 491 AYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLN 550
Query: 483 EMFE 486
M +
Sbjct: 551 SMLD 554
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 178/453 (39%), Gaps = 72/453 (15%)
Query: 69 LTPTQFSQI--ALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARD 126
LT T F I A G + P A+ FF + CK ++ S+ +++++
Sbjct: 98 LTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNV------------ 145
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
+I+ S L +F K ++ ++L+IK ++ I++ VD R
Sbjct: 146 IIQEGDFSYAFKFYLHVFGANSKGFQ---PNLLTYNLIIKALCKLGQIDR---AVDTFRE 199
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+ + + V T + L+ G+ + VF LD G PN
Sbjct: 200 MPLKNCNPDVFTYSTLM------NGLCKERRVDEAVFLLDEMQAEG----------CLPN 243
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
TFN L+ + G + + M GC P+ +Y+ L+ C + ++ +A L E
Sbjct: 244 PVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLE 303
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+M + V Y TII G + M G +++ + L++G + G
Sbjct: 304 KMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEG 363
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++A+ ++ +M KG +P I LC + EA DIL+ + K G P +Y
Sbjct: 364 KSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK-GFLPNAFTY 422
Query: 427 MFLIK-----------------------------------GLCEEGKMEEALKVQAEMVG 451
L+K GLCE G++ EAL V M+G
Sbjct: 423 SSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLG 482
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+G +P + YS+ I G G+V+ L EM
Sbjct: 483 EGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 515
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 1/224 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+ N + +++L+ G ++EG E +W EMA GC+P+ Y + C + + EAE
Sbjct: 346 KANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAED 405
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ +EM K + Y++++ GF + G+ +A ++EM + + V L+NG C
Sbjct: 406 ILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLC 465
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL-KARVVKFGLFPT 422
+G + A+ V+ M +G +P+ +I LCD V + L + + + + P
Sbjct: 466 ESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPD 525
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+Y L LC + + A+ + M+ +G +P + F++
Sbjct: 526 VVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLE 569
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 98/257 (38%), Gaps = 39/257 (15%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
EK + DI++ ++S+G T ++L+ + +++E+ D
Sbjct: 398 EKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQD-------- 449
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+R NV + L+ G G + VW M G +PD +YS ++ C+
Sbjct: 450 --------MRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCD 501
Query: 295 ERRMREAEKLWEEM--RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
+ + KL+ EM ++ DVV YN + C + RA + M G + S
Sbjct: 502 VGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDS 561
Query: 353 VT---------------------FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+T + LV + SA+ + +M + PE ST
Sbjct: 562 LTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWS 621
Query: 392 VLIGELCDKRRVFEALD 408
+I C +R+ E +D
Sbjct: 622 RVIQRTCKPKRIRETID 638
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 141/281 (50%), Gaps = 36/281 (12%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ P+V T+NAL+ GF D++ +M + P+ Y++++L+ FC+E ++ +A
Sbjct: 231 RICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDA 290
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ + M +++ DVV YN+++ G+C I ++ +A++ F M GV ++ + +VNG
Sbjct: 291 KVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNG 350
Query: 362 YCRAGDVDSAILVYNDM-CRKGFEPEGSTIEVLIGELCDKRRVFEALDILK--------A 412
+C+ VD AI ++ +M CRK P T LI LC R+F AL ++
Sbjct: 351 FCKIKMVDEAINLFEEMRCRK-IIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPP 409
Query: 413 RVVKF--------------------------GLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
+V + G+ P +Y LIKGLC+ G++E+A V
Sbjct: 410 NIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVF 469
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+++ KG+ + Y+ I G+ +G + A L +M +N
Sbjct: 470 EDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDN 510
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 129/242 (53%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+V T+N+LM G+ K +D++ MA G + Y+ ++ FC+ + + EA
Sbjct: 302 IKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAI 361
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+EEMR + + +VV Y+++I G C++G + A + EM G + VT+ +++
Sbjct: 362 NLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDAL 421
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ VD AI + ++ +G P+ T +LI LC R+ +A ++ + +VK G
Sbjct: 422 CKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVK-GYNLD 480
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I+G C++G ++AL + ++M G P+ + Y I ++ + A L +
Sbjct: 481 VYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLR 540
Query: 483 EM 484
EM
Sbjct: 541 EM 542
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 118/244 (48%), Gaps = 5/244 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ + TFN L+ F + G ++ ++ + G P +++ L+ C + + +A
Sbjct: 92 IESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQAL 151
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ + D V+Y T+I G C++G + A + + + V+ ++V + +++
Sbjct: 152 HFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNM 211
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A V+ A +Y+ M K P+ T LI ++ A+D+ ++ K + P
Sbjct: 212 CKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFN-KMKKENINPN 270
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ L+ G C+EGK+ +A V A M+ +P + Y++ +DGY V A K
Sbjct: 271 VYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKA----K 326
Query: 483 EMFE 486
++F+
Sbjct: 327 DIFD 330
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 112/248 (45%), Gaps = 1/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P FN ++ + + +M G E D +++++L+ F + + +
Sbjct: 59 PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ ++ K + +NT+I G C G + +A F ++ G V++ L+NG C+
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + +A+ + + K +P ++I +C + V +A D+ V K + P
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK-RICPDVF 237
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G K+ A+ + +M + P++ ++ +DG+ KEG V A ++ M
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIM 297
Query: 485 FENQVRQE 492
++ ++ +
Sbjct: 298 MKDDIKPD 305
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 103/243 (42%), Gaps = 16/243 (6%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
I K+ DI + S G+ V ++ + K V ++ E+
Sbjct: 319 INKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEM----------- 367
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
R ++ PNV T+++L+ G + G + EM G P+ +YS ++ C
Sbjct: 368 -----RCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALC 422
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + +A L ++D+ + D+ Y +I G C+ G + A+ F ++ + G
Sbjct: 423 KNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVY 482
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
+ ++ G+C G D A+ + + M G P T E++I L +K A +L+
Sbjct: 483 AYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREM 542
Query: 414 VVK 416
+V+
Sbjct: 543 IVR 545
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 1/179 (0%)
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
KN +N I+ + + A ++M L+G+ES TF L+N + + G
Sbjct: 55 KNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSL 114
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
+ ++ + +KG+ P T LI LC K + +AL +VV G + SY LI
Sbjct: 115 SFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALH-FHDKVVAQGFHLDQVSYGTLI 173
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
GLC+ G++ AL++ + GK +P+ +Y+ ID K V A L +M ++
Sbjct: 174 NGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRI 232
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 70/139 (50%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+++++ + +K + + G PD Y+Y++L+ C+ R+ +A+ +
Sbjct: 409 PNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNV 468
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E++ K DV AY +I GFC+ G +A +M +G ++ T+E ++
Sbjct: 469 FEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFE 528
Query: 365 AGDVDSAILVYNDMCRKGF 383
+ D+A + +M +G
Sbjct: 529 KDENDTAEKLLREMIVRGL 547
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RP+++T+ L+ G + G E ++V+ ++ G D Y+Y+V++ FC++ +A
Sbjct: 442 IRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKAL 501
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
L +M D + Y +I E E AE+ REM + G+
Sbjct: 502 ALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 215/476 (45%), Gaps = 50/476 (10%)
Query: 53 RSKSRWNHLLSLCRSGLT---PTQFSQIALGLKNNPHLALRFFSF-TQHKSLCKHSLSSY 108
RSK RW L P+ FS++ L NN L+LRFF + + H +S
Sbjct: 105 RSKPRWEQSLLSDYPSFNFHDPSFFSELLKQL-NNVFLSLRFFLWLSSQPEFLPHPVSC- 162
Query: 109 ATIIHILSRARLIGPARDVIRVALRSPENDP---------KLKLFEVLVKTY---RECGS 156
+ L A+ PA+ + SPE + L E V T+ +E G
Sbjct: 163 NKLFDALLEAKACVPAKSFLYSFEFSPEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGY 222
Query: 157 APFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLS--VKVSTCNALIWEVSRGKGV 212
P+V ++ + CL+ + I + +M G+ V + T LI V
Sbjct: 223 RPYVETWNFAFQSCLKFGRTDLI---WKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKV 279
Query: 213 ISGYEIYREVF--GLD--SDA----TAGIGKDVKR----------VVRVR-PNVHTFNAL 253
YEI R+ GL +DA +G K+ +V+ R P++ T+ +
Sbjct: 280 SRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEI 339
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ GF + + +V+ + G PD Y+ L+ FC+ ++ +A KLW EM DK
Sbjct: 340 INGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGF 399
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
+ +YNT+I GFC+IG + A + +++M SG + ++++ L+ G C G D A
Sbjct: 400 LPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYD 459
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ +M K + T LI C + +V ++ D+LK K GL P+ SY LI+ L
Sbjct: 460 FFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAK-GLQPSTSSYAHLIQKL 518
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSL----EIYSAFID-GYMKEGNVEMATMLRKEM 484
C+ G ++EA ++ +M +G +P + I S + GY+ EG + TML+ +
Sbjct: 519 CQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNL 574
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 7/193 (3%)
Query: 303 KLWEEMRDKNVEHDV----VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
KL+E M + V+ DV V Y +I FC +++RA E R+ G+ + F L
Sbjct: 247 KLYEGMMETGVQKDVDIETVGY--LIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKL 304
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++G+C+ + + + + M K P+ T + +I C +A ++ A + G
Sbjct: 305 ISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDR-G 363
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
P Y LI G C+ G++E+A K+ EM+ KGF P+ Y+ I G+ K GN++ A
Sbjct: 364 YAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAM 423
Query: 479 MLRKEMFENQVRQ 491
L K+M ++ ++
Sbjct: 424 KLYKKMLDSGYKE 436
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 186/426 (43%), Gaps = 46/426 (10%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRAR----LIGPA 124
L+P ++ L N LAL FF + + + KH+ SY +I L + + +
Sbjct: 120 LSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLV 179
Query: 125 RDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIV 184
D+ R + S E F ++ + Y K++ V+
Sbjct: 180 SDMKRKGILSRET------FALITRRYARA--------------------RKVKEAVESF 213
Query: 185 RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVR 244
+ G + VS N L+ + + + V E++ D + R +
Sbjct: 214 EKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVF----------------DKMKHGRFK 257
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ ++ L+ G+ ++ K+ +V+ EM G EPD ++ +L+ C+ R+ EA +L
Sbjct: 258 PDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRL 317
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM KN++ + T+I G + A EFF ++ LSG + T+ +V YC
Sbjct: 318 FHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCW 377
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ + A + ++M + G P T ++++ L R+ EA + + + G PT
Sbjct: 378 SMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLS 437
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I+ C E +++ A+++ EM KG P + ++S I+ E +E A +EM
Sbjct: 438 TYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEM 497
Query: 485 FENQVR 490
+ +R
Sbjct: 498 LDVGIR 503
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 112/249 (44%), Gaps = 22/249 (8%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
+I ++ + D ++LF + + +P VF LI + + ++++ ++
Sbjct: 301 LINAHCKARKYDEAIRLFHEM--EAKNIKPSPHVFCTLING---LGSEKRLKEALEFFEQ 355
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
L G + + T NA++ + Y + +D +G+G PN
Sbjct: 356 LKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRM------VDEMRKSGVG----------PN 399
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
T++ ++ + ++ V+ M+R GCEP +Y +++ +FC E R+ A ++W
Sbjct: 400 SRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIW 459
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM+ K V + ++T+I C ++ A +F+EM G+ + F +L
Sbjct: 460 DEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDD 519
Query: 366 GDVDSAILV 374
G D+A+L+
Sbjct: 520 GRKDTALLM 528
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 128/249 (51%), Gaps = 2/249 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VR V +FN ++ G R G + E + M+ G PD Y+Y L+ C R+ +A
Sbjct: 147 VRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDAR 206
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++E+M + ++ + V + +I C+ G+ E REM GV +VT+ +VNG
Sbjct: 207 GVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGL 266
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRA D+ SA + +M G P+ T LI C + + A++I K +V G+
Sbjct: 267 CRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEI-KQNMVAEGVGLD 325
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E +Y LI GL + G+ +A +V EM+ G EP Y+ ID + ++G+V+ L K
Sbjct: 326 EVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK 385
Query: 483 EMFENQVRQ 491
EM +N+ R+
Sbjct: 386 EM-QNKGRK 393
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 154/354 (43%), Gaps = 38/354 (10%)
Query: 139 PKLKLFEVLVKTYRECG---SAPFVFD---------------LLIKCCLEVKNIEKIETC 180
P+ KLF VL++ G SA VFD +I +++ ET
Sbjct: 114 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAET- 172
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
+ R + G++ V T ALI + R + E R VF + G G
Sbjct: 173 --LHRRMSEAGVTPDVYTYGALIQGLCR----VGRIEDARGVF----EKMCGRG------ 216
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
++PN F L+ ++G E + ++ EM G PD +Y+ ++ C R ++
Sbjct: 217 --MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKS 274
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A + EMR + D V Y T+I G+C+ E+ A E + M GV VT+ L++
Sbjct: 275 ASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALIS 334
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G +AG A V +M G EP+ +T ++I C K V L +LK K G
Sbjct: 335 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNK-GRK 393
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
P +Y ++ G C+ G+M+ A + M+ G P Y+ +DG+ K G V
Sbjct: 394 PGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV 447
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
++++ G P+ ++VLM + A+ +++EM+ + V VV++NT+I G C
Sbjct: 104 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 163
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G++ AE R M +GV T+ L+ G CR G ++ A V+ MC +G +P
Sbjct: 164 AGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV 223
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
+LI C K L+ L + + G+ P +Y ++ GLC ++ A + EM
Sbjct: 224 FTILIDAHCKKGDAETMLE-LHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEM 282
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G P Y+ IDGY KE ++MA +++ M V
Sbjct: 283 RSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGV 322
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P FN LM R G ++V+ EM G S++ +++ C + AE L
Sbjct: 114 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL 173
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M + V DV Y +I G C +G + A F +M G++ ++V F L++ +C+
Sbjct: 174 HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCK 233
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GD ++ + ++ +M +G P+ T ++ LC R + A I+ + GL P
Sbjct: 234 KGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV-VEMRSAGLRPDTV 292
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C+E +++ A++++ MV +G Y+A I G K G A + EM
Sbjct: 293 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 352
Query: 485 FENQVRQED 493
E + ++
Sbjct: 353 MEAGLEPDN 361
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 36/193 (18%)
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
EA + ++ D + + +N ++ +GE+A A+ F EM GV + V+F ++
Sbjct: 99 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+G CRAGD+D A ++ RR+ EA G+
Sbjct: 159 SGMCRAGDLDGAETLH-------------------------RRMSEA-----------GV 182
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI+GLC G++E+A V +M G+G +P+ +++ ID + K+G+ E
Sbjct: 183 TPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLE 242
Query: 480 LRKEMFENQVRQE 492
L +EM E VR +
Sbjct: 243 LHREMRERGVRPD 255
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 158/314 (50%), Gaps = 20/314 (6%)
Query: 190 RGLSVKVSTCNALIW------EVSRGKGVIS-------GYEIYREVFGLDSDATAGIGKD 236
+G+S V T N LI+ ++ G+++ +Y +D+ G K+
Sbjct: 228 KGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKE 287
Query: 237 VKRVVRV------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
K V+ V +P+V T++ LM G++ +K + V+ M+ +G PD ++Y++L+
Sbjct: 288 AKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN 347
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
FC+ + + EA L++EM KN+ +V Y+++I G C+ G ++ + EM G +
Sbjct: 348 GFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPA 407
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+T+ L++G C+ G +D AI ++N M + P T +L+ LC R+ +A ++
Sbjct: 408 DVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVF 467
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ + K G +Y +I G C++G +EEAL + ++M G P+ + I K
Sbjct: 468 QDLLTK-GYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFK 526
Query: 471 EGNVEMATMLRKEM 484
+ + A L ++M
Sbjct: 527 KDENDKAEKLLRQM 540
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 162/362 (44%), Gaps = 22/362 (6%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM-LMSRGLSVKVS 197
P L +L+ + G F F +L K I K D V + + +GL +K
Sbjct: 92 PDLITLNILINCFCHMGQITFGFSVLAK-------ILKRGYPPDTVTLNTLIKGLCLKGQ 144
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR---------VRPNVH 248
AL + K + G+++ + + + IG D + ++ +P+V
Sbjct: 145 VKKALHFH---DKLLAQGFQLNQVSYATLINGVCKIG-DTRAAIKFLRKIDGRLTKPDVV 200
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+N ++ + + ++ EMA G D +Y+ L+ FC +++EA L EM
Sbjct: 201 MYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEM 260
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
K + +V YN ++ C+ G++ A+ M + V+ +T+ L++GY +V
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEV 320
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A V+N M G P+ T +LI C + V EAL++ K K + P +Y
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQK-NMVPGIVTYSS 379
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI GLC+ G++ + EM +G + YS+ IDG K G+++ A L +M + +
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439
Query: 489 VR 490
+R
Sbjct: 440 IR 441
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 118/252 (46%), Gaps = 1/252 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+R P + FN ++ F + + + + G +PD + ++L+ FC ++
Sbjct: 53 MRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITF 112
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ ++ + D V NT+I G C G++ +A F ++ G + + V++ L+N
Sbjct: 113 GFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 172
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ GD +AI + + +P+ +I +C + V EA + VK G+
Sbjct: 173 GVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVK-GIS 231
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y LI G C GK++EA+ + EMV K P++ Y+ +D KEG V+ A +
Sbjct: 232 ADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 481 RKEMFENQVRQE 492
M + V+ +
Sbjct: 292 LAVMLKACVKPD 303
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 86/172 (50%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + T+++L+ G + G V D+ EM G D +YS L+ C+ + A L
Sbjct: 372 PGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 431
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M+D+ + ++ + ++ G C+ G + A+E F+++ G + T+ ++NG+C+
Sbjct: 432 FNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCK 491
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
G ++ A+ + + M G P T E +I L K +A +L+ + +
Sbjct: 492 QGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIAR 543
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 242 RVRP-NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
R +P +V T+++L+ G + G ++ ++ +M P+ +++++L+ C+ R+++
Sbjct: 403 RGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKD 462
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A+++++++ K +V YN +I G C+ G + A +M +G ++ TFE ++
Sbjct: 463 AQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIII 522
Query: 361 GYCRAGDVDSAILVYNDMCRKGF 383
+ + D A + M +G
Sbjct: 523 ALFKKDENDKAEKLLRQMIARGL 545
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 177/387 (45%), Gaps = 9/387 (2%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPEN--DPKLKLFEVLVKTYRECGSAPFVFDLL 164
SY T+IH L + +G R + + R N P + ++ ++ + + FDL
Sbjct: 192 SYGTLIHGLCK---VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248
Query: 165 IKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG 224
+ + + + + I + L+ + N +I E K + + I F
Sbjct: 249 SEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILE--NIKPDVYTFNILVNAFC 306
Query: 225 LDSDATAGIGK-DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
D G D+ ++PN T+N+LM G+ K + ++ MA+ G PD
Sbjct: 307 KDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
SYS+++ FC+ ++ EA L++EM KN+ DVV Y+++I G + G ++ A + +M
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
GV + T+ +++ C+ VD AI + + KG +P T +LI LC ++
Sbjct: 427 HDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKL 486
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
+A + + +VK G +Y +I+G C EG EAL + ++M G P + Y
Sbjct: 487 EDARKVFEGLLVK-GHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQVR 490
I K+ +MA L +EM VR
Sbjct: 546 IILSLFKKDENDMAEKLLREMIARGVR 572
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 169/355 (47%), Gaps = 20/355 (5%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM-LMSRGLSVKVS 197
P L +L+ + + G PF F + K I K+ D + + +GL +K
Sbjct: 118 PNLVNCNILINCFCQLGLIPFAFSVFAK-------ILKMGYVPDTITFTTLIKGLCLKGQ 170
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD------VKRV--VRVRPNVHT 249
A ++ K V G+ + +G +G+ ++RV V+PNV
Sbjct: 171 IQQAFLF---HDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVM 227
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N ++ + + D++ EM G PD +YS L++ FC ++ +A L+ +M
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI 287
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+N++ DV +N ++ FC+ G+M + F M G++ + VT+ L++GYC +V+
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A ++N M + G P+ + ++I C ++ EA+++ K K + P +Y L
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRK-NIIPDVVTYSSL 406
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
I GL + G++ AL++ +M +G P++ Y++ +D K V+ A L ++
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKL 461
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 34/279 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ TF L+ G +G ++ ++ LG D SY L+ C+ R A L
Sbjct: 153 PDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDL 212
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + V+ +VV YNTII C++ + A + F EM G+ VT+ L++G+C
Sbjct: 213 LQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCI 272
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC------DKRRVFEAL----------- 407
G ++ AI ++N M + +P+ T +L+ C + + VF+ +
Sbjct: 273 LGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVT 332
Query: 408 ------------DILKARVV-----KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
++ KA+ + + G+ P +SY +I G C+ K +EA+ + EM
Sbjct: 333 YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMH 392
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
K P + YS+ IDG K G + A L +M + V
Sbjct: 393 RKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 125/250 (50%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN+ N L+ F + G V+ ++ ++G PD +++ L+ C + ++++A
Sbjct: 116 IKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAF 175
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ D ++Y T+I G C++GE A + + + + V+ + V + +++
Sbjct: 176 LFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSM 235
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ V+ A ++++M KG P+ T LI C ++ +A+D+ +++ + P
Sbjct: 236 CKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILE-NIKPD 294
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ L+ C++GKM+E V M+ +G +P+ Y++ +DGY V A +
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFN 354
Query: 483 EMFENQVRQE 492
M + V +
Sbjct: 355 TMAQGGVNPD 364
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 110/247 (44%), Gaps = 1/247 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N ++++ F+ + ++ + R P + ++ ++ + + L
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++M + ++ ++V N +I FC++G + A F ++ G ++TF L+ G C
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + A L ++ + GF + + LI LC ALD+L+ RV + P
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQ-RVDGNLVQPNVVM 227
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I +C+ + EA + +EM+ KG P + YSA I G+ G + A L +M
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI 287
Query: 486 ENQVRQE 492
++ +
Sbjct: 288 LENIKPD 294
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 68/143 (47%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P + T+N+++ + +K + ++ G +P+ Y+YS+L+ C+ ++ +A
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDAR 490
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++E + K +V Y +I GFC G A +M +G + T+E ++
Sbjct: 491 KVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSL 550
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
+ + D A + +M +G P
Sbjct: 551 FKKDENDMAEKLLREMIARGVRP 573
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN++T++ L+ G + G E V+ + G + +Y++++ FC E EA
Sbjct: 466 IQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEAL 525
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
L +M D D Y II + E AE+ REM GV +
Sbjct: 526 ALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQI 576
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 179/384 (46%), Gaps = 38/384 (9%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C+ ++ +Y+T+IH L + R + A D+ +++ + P + + L++
Sbjct: 111 CQLNVVTYSTLIHSLCKYRRVNEALDIFSY-MKAKDISPTIFTYTSLIQG---------- 159
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
+ N + + ++ + S + V T N L+ + V+
Sbjct: 160 ----------LCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVL------- 202
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
A G+ K + + V P+V T+N+LM G+ + ++ M GC+P
Sbjct: 203 --------AAEGVLKTMTEM-GVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKP 253
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D +SYS+L+ +C+ +R+ EA++L+ EM + + V+YNT+I G C++G + A++ F
Sbjct: 254 DVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLF 313
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
+ M +G + T+ L++G+C+ G + A ++ M +P +L+ +C
Sbjct: 314 KNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKS 373
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+ +A ++ V GL P + Y +I GLC+EG ++EAL+ M G P
Sbjct: 374 GNLKDARELFSELFV-IGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFS 432
Query: 461 YSAFIDGYMKEGNVEMATMLRKEM 484
Y+ I G+++ + A L EM
Sbjct: 433 YNVIIRGFLQHKDESRAVHLIGEM 456
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 125/243 (51%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P + T+ +L+ G +++ + EM L P+ +++VL+ FC+E ++ AE
Sbjct: 146 ISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAE 205
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M + VE DVV YN+++ G+ E+ A + F M G + ++ L+NGY
Sbjct: 206 GVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGY 265
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A +D A ++N+M +G P + LI LC R+ EA D+ K G P
Sbjct: 266 CKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTN-GNLPN 324
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G C++G + +A ++ M +P+L +Y+ ++ K GN++ A L
Sbjct: 325 LYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFS 384
Query: 483 EMF 485
E+F
Sbjct: 385 ELF 387
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 158/319 (49%), Gaps = 23/319 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++ +DI + ++ +S + T +LI + + ++E L ++ T+
Sbjct: 130 RVNEALDIFSYMKAKDISPTIFTYTSLIQG-------LCNFSRWKEASALLNEMTS---- 178
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ + PNV TFN L+ F +EG E V M +G EPD +Y+ LM +
Sbjct: 179 -----LNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMW 233
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ EA KL++ M K + DV +Y+ +I G+C+ + A++ F EM G ++V++
Sbjct: 234 TEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSY 293
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C+ G + A ++ +M G P T +L+ C + + +A + +A
Sbjct: 294 NTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQS 353
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ L P Y L+ +C+ G +++A ++ +E+ G +P+++IY+ I+G KEG ++
Sbjct: 354 TY-LKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLD 412
Query: 476 MATMLRKEMFENQVRQEDG 494
A E F N ++DG
Sbjct: 413 EAL----EAFRNM--EDDG 425
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P + TF L+ G + G F + +++ +M GC+PD Y+Y+ ++ C+ A
Sbjct: 41 LQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAA 100
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+++M + + +VV Y+T+I C+ + A + F M + + T+ L+ G
Sbjct: 101 GLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGL 160
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C A + N+M P T VL+ C + +V A +LK + + G+ P
Sbjct: 161 CNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKT-MTEMGVEPD 219
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G ++ EA K+ M+ KG +P + YS I+GY K ++ A L
Sbjct: 220 VVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFN 279
Query: 483 EM 484
EM
Sbjct: 280 EM 281
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN T N L+ F + + V + +LG +P +++ L+ + + +A
Sbjct: 6 LSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAV 65
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+++M + + D Y TII G C+IGE A A F++M +G + + VT+ L++
Sbjct: 66 ELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSL 125
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ V+ A+ +++ M K P T LI LC+ R EA +L + + P
Sbjct: 126 CKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLN-EMTSLNIMPN 184
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
++ L+ C+EGK+ A V M G EP + Y++ + GY
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGY 230
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN++T+ L+ GF ++G K ++ M +P+ Y++L+ C+ +++A +L
Sbjct: 323 PNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDAREL 382
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ E+ ++ +V Y TII G C+ G + A E FR M G ++ ++ G+ +
Sbjct: 383 FSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQ 442
Query: 365 AGDVDSAILVYNDMCRKGFEPEGST 389
D A+ + +M +GF + T
Sbjct: 443 HKDESRAVHLIGEMRDRGFITDAGT 467
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G P T+ +LI C +RV +L A+ +K GL PT ++ LI GL + GK +
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVL-AKGIKLGLQPTIVTFTTLINGLGKVGKFAQ 63
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
A+++ +MV +G +P Y+ I+G K G +A L K+M E
Sbjct: 64 AVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEE 108
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 86/210 (40%), Gaps = 37/210 (17%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
SY T+IH L + + A+D+ + + + N P L + +L+ + + G F L
Sbjct: 292 SYNTLIHGLCQLGRLREAQDLFK-NMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLF-- 348
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
R + S L + N L+ + + + E++ E+F
Sbjct: 349 ------------------RAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELF--- 387
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
V+ ++PNV + ++ G +EG ++ + + M GC PD +SY+
Sbjct: 388 -------------VIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYN 434
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
V++ F + + A L EMRD+ D
Sbjct: 435 VIIRGFLQHKDESRAVHLIGEMRDRGFITD 464
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 79/220 (35%), Gaps = 71/220 (32%)
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVD--------------------------------- 369
M L+G+ ++ T L+N +C+ VD
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 370 --SAILVYNDMCRKGFEPEGST-----------------------------------IEV 392
A+ +++DM +G +P+ T
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI LC RRV EALDI K + PT +Y LI+GLC + +EA + EM
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAK-DISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSL 179
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
P++ ++ +D + KEG V A + K M E V +
Sbjct: 180 NIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPD 219
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 203/451 (45%), Gaps = 73/451 (16%)
Query: 64 LCRSGLTPTQFSQIA--------------------LGLKNNPHLALRFFSFTQHKSLCKH 103
C+ GL P FS +A LK H AL F H L
Sbjct: 115 FCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNF-----HDKLVAL 169
Query: 104 SLS----SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPF 159
SY T+I+ L + +G R + + R D KL +V++
Sbjct: 170 GFHLDQVSYGTLINGLCK---VGETRAALELLRRV---DGKLVQLDVVM----------- 212
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI- 218
+ +I + KN+ D+ ++SR +S + T +ALI SG+ I
Sbjct: 213 -YSTIIDSMCKDKNVND---AFDLYSEMVSRRISSNIVTYSALI----------SGFCIV 258
Query: 219 --YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
++ GL + T+ + P+V+TFN L+ F +EG ++ ++ M +
Sbjct: 259 GKLKDAIGLFNKMTSE---------NINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQ 309
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G +PD +Y+ LM +C + A+ + M + V V +YN +I GFC+I + +A
Sbjct: 310 GIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQA 369
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ F+EM + + +T+ L++G C++G + A+ + + M +G +P+ T ++
Sbjct: 370 MKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDA 429
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC V +A+ +L ++ G+ P +Y LI GLC+ G++E+A + +++ KG+
Sbjct: 430 LCKNHLVDKAIALL-IKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNL 488
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++ Y+ I G+ G + A L +M +N
Sbjct: 489 TVNTYTVMIQGFCSHGLFDEALSLLSKMKDN 519
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 166/361 (45%), Gaps = 20/361 (5%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM-LMSRGLSVKVS 197
P F +L+ + + G PF F +L K I K+ D + + +G +K
Sbjct: 103 PNFVNFNILINCFCQLGLIPFAFSVLAK-------ILKMGYEPDTITLNTFIKGFCLKGQ 155
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD------VKRV--VRVRPNVHT 249
AL + K V G+ + + +G + +G+ ++RV V+ +V
Sbjct: 156 IHQALNFH---DKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVM 212
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
++ ++ ++ D++ EM + +YS L++ FC ++++A L+ +M
Sbjct: 213 YSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMT 272
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+N+ DV +N ++ FC+ G + A+ M G++ VT+ L++GYC +V+
Sbjct: 273 SENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVN 332
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + N M +G + ++I C + V +A+ + K K +FP +Y L
Sbjct: 333 MAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHK-QIFPNVITYNSL 391
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I GLC+ G++ AL++ M +G +P + YS+ +D K V+ A L ++ + +
Sbjct: 392 IDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGI 451
Query: 490 R 490
R
Sbjct: 452 R 452
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 116/242 (47%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN FN L+ F + G V ++ ++G EPD + + + FC + ++ +A
Sbjct: 101 IKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQAL 160
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ D V+Y T+I G C++GE A E R + V+ V + +++
Sbjct: 161 NFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSM 220
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ +V+ A +Y++M + T LI C ++ +A+ + ++ + P
Sbjct: 221 CKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFN-KMTSENINPD 279
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ L+ C+EG+++EA A M+ +G +P + Y++ +DGY V MA +
Sbjct: 280 VYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILN 339
Query: 483 EM 484
M
Sbjct: 340 TM 341
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 109/228 (47%), Gaps = 1/228 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F ++ + + V ++ +M G +P+ ++++L+ FC+ + A + ++
Sbjct: 73 FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKIL 132
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
E D + NT I GFC G++ +A F ++ G V++ L+NG C+ G+
Sbjct: 133 KMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 192
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+A+ + + K + + +I +C + V +A D L + +V + +Y L
Sbjct: 193 AALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFD-LYSEMVSRRISSNIVTYSAL 251
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
I G C GK+++A+ + +M + P + ++ +D + KEG V+ A
Sbjct: 252 ISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEA 299
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 112/247 (45%), Gaps = 16/247 (6%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ ++ I+ + RG++ V + N +I + K V ++++E+
Sbjct: 328 VNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEM----------- 376
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
++ PNV T+N+L+ G + G ++ M G +PD +YS ++ C
Sbjct: 377 -----HHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALC 431
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + +A L +++D+ + ++ Y +I G C+ G + A F ++ + G +
Sbjct: 432 KNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVN 491
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ ++ G+C G D A+ + + M P+ T E++I L DK +A +L+
Sbjct: 492 TYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREM 551
Query: 414 VVKFGLF 420
+ + L+
Sbjct: 552 ITRGLLY 558
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 1/200 (0%)
Query: 290 AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
F + +A L+ + +N + + I+G + F++M G++
Sbjct: 43 TTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIK 102
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
+ V F L+N +C+ G + A V + + G+EP+ T+ I C K ++ +AL+
Sbjct: 103 PNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALN- 161
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
++V G + SY LI GLC+ G+ AL++ + GK + + +YS ID
Sbjct: 162 FHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMC 221
Query: 470 KEGNVEMATMLRKEMFENQV 489
K+ NV A L EM ++
Sbjct: 222 KDKNVNDAFDLYSEMVSRRI 241
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 103/245 (42%), Gaps = 13/245 (5%)
Query: 257 FYREGAFEKVEDVWVEMARLGC------EPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
F F DV ++ C P + ++ + + L+++M
Sbjct: 39 FSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEY 98
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
+ ++ + V +N +I FC++G + A ++ G E ++T + G+C G +
Sbjct: 99 RGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQ 158
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLFPTEKSYM 427
A+ ++ + GF + + LI LC + R E L + ++V+ + Y
Sbjct: 159 ALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVV----MYS 214
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+I +C++ + +A + +EMV + ++ YSA I G+ G ++ A L +M
Sbjct: 215 TIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSE 274
Query: 488 QVRQE 492
+ +
Sbjct: 275 NINPD 279
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 85/218 (38%), Gaps = 32/218 (14%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V+T+ ++ GF G F++ + +M C PD +Y +++ ++ +AEKL
Sbjct: 490 VNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLR 549
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL---SGVESSSVTFEHLVNGYC 363
EM + + + + Y G + MA F L S ES + L YC
Sbjct: 550 EMITRGLLYSFLEY-----GSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYC 604
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+L ++M K E V+I CD + LD+
Sbjct: 605 ------DCVLTKSNMRDKDVECP----SVIIYSTCDWSKQGYILDV-------------- 640
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+Y +I+G C G +E+L + ++M G P Y
Sbjct: 641 NTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTY 678
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 6/256 (2%)
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
G G V+ V P T+N+L+ G + + D+ EM GC PD ++Y+ L+
Sbjct: 40 GCGAAVQDAEEV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITG 98
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG-VES 350
FC+ ++ +A +++E++ + DVV Y+ +I G C+ G + A + F M SG
Sbjct: 99 FCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP 158
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
++VT+ L++G+CR G +D A+ + M G P+ T L+ C R+ +A D+L
Sbjct: 159 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 218
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
++ + GL P ++ L+ GLC E ++ +A+ + EM K P++ Y+ +DGY +
Sbjct: 219 N-QMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 277
Query: 471 EGNVEMATMLRKEMFE 486
+E A RK M E
Sbjct: 278 VNQLEEA---RKFMLE 290
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 4/244 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEERRMREAE 302
RP+V T++ L+ G +EG ++ D++ M + G C P+ +Y+ L++ FC +M EA
Sbjct: 121 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 180
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L E M + DVV Y T++ GFC++ + A + +M G+ + VTF L++G
Sbjct: 181 NLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGL 240
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR + A+ + +M RK P T ++ C RV + + K + + P
Sbjct: 241 CRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYC---RVNQLEEARKFMLEEMDCPPN 297
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
S+ +I+GLC+ + EA+++ E + P + +Y+ ID +E V+ A + +
Sbjct: 298 VVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYR 357
Query: 483 EMFE 486
+M E
Sbjct: 358 KMLE 361
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 2/182 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ LM GF + + D+ +M R G P+ +++ LM C E R+ +A +
Sbjct: 193 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHI 252
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EMR K+ V YNTI+ G+C + ++ A +F E + V+F ++ G C+
Sbjct: 253 LGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEE--MDCPPNVVSFNIMIRGLCK 310
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A+ + + R+ P+ +I LC +++V EA + + + + G P
Sbjct: 311 VNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSI 370
Query: 425 SY 426
+Y
Sbjct: 371 TY 372
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P T LI LC R EA D+L+ +V G P +Y LI G C+ K ++AL+
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLE-EMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
V ++V +GF P + YS IDG KEG ++ A L M ++
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKS 153
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 123/245 (50%), Gaps = 4/245 (1%)
Query: 249 TFNALMVGFYREGAFEK---VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++N ++ R+G + + V RL P+ SY+ LM C +RR +A L
Sbjct: 58 SYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLL 117
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M+D V DVV Y T+I G C+ ++ A E EM SG+E + V + L++GYC+
Sbjct: 118 RSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKT 177
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G +S V+ +M +G EP+ LI LC +V +A ++ + + GL P +
Sbjct: 178 GRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDM-MTERGLEPNVVT 236
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI +C+EG + EAL ++ M KG +P + Y+ I G ++ A L +EM
Sbjct: 237 YNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMM 296
Query: 486 ENQVR 490
+ + R
Sbjct: 297 QGETR 301
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VRP+V T+ L+ G + ++ EM G EP+ YS L+ +C+ R
Sbjct: 125 VRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVG 184
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++EEM + +E DVV Y +I C G++ +A M G+E + VT+ L+N
Sbjct: 185 KVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSM 244
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV-KFGLFP 421
C+ G V A+ + +M KG +P+ T LI L + EA+ +L+ + + + P
Sbjct: 245 CKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRP 304
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
++ +I GLC+ G M +AL+V+A M G +L ++ I G ++ V+ A L
Sbjct: 305 DLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELM 364
Query: 482 KEMFENQVRQE 492
EM + ++ +
Sbjct: 365 DEMASSGLQPD 375
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 154/336 (45%), Gaps = 25/336 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE-------------- 221
K++ ++ M+ RGL V T N LI + + V ++ +
Sbjct: 214 KVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYN 273
Query: 222 --VFGLDS-----DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
+ GL S +A A + + ++ RVRP++ TFN+++ G + G + V MA
Sbjct: 274 TLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMA 333
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
GC + ++++L+ ++++A +L +EM ++ D Y+ +I GFC++ ++
Sbjct: 334 ENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVE 393
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
RAE + EM G+E V + L+ C G + A ++N+M R + ++
Sbjct: 394 RAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIH 453
Query: 395 GEL-CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
G ++++ E + LK ++ GL P +Y I + G + A +V +M G
Sbjct: 454 GAFKSGEKKIAE--EFLK-DMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASG 510
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
F P + ++ + I GY +G+ E L +EM V
Sbjct: 511 FVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDV 546
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 4/215 (1%)
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDK---NVEHDVVAYNTIIGGFCEIGEMARAE 337
D SY+ ++A C + + A L M + + ++Y T++ C A+A
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
R M GV VT+ L+ G C A DVD+A+ + N+MC G EP L+
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C R +E++ + + G+ P Y LI LC GK+++A +V M +G EP+
Sbjct: 175 CKTGR-WESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPN 233
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ Y+ I+ KEG+V A LRK M E V+ +
Sbjct: 234 VVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPD 268
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 108/247 (43%), Gaps = 50/247 (20%)
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
CN + + + G G++ +++ + + +D A++G+ +P+ T++ L+ GF
Sbjct: 339 CNLVAFNLLIG-GLLRVHKVKKAMELMDEMASSGL----------QPDSFTYSILINGFC 387
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ E+ E EM G EP+ Y L+ C++ M +A L+ EM D+N + D
Sbjct: 388 KMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAA 446
Query: 319 AYNTIIGG-----------------------------------FCEIGEMARAEEFFREM 343
AY+T+I G F + G++A AE ++M
Sbjct: 447 AYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQM 506
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK--GFEPE-GSTIEVLIGELCDK 400
SG F+ L+ GY GD + + + +M K +P+ STI +G +
Sbjct: 507 TASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIEG 566
Query: 401 RRVFEAL 407
+++ ++L
Sbjct: 567 QKLLQSL 573
>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
Length = 363
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 123/251 (49%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN+ T+N+L+ GF + + EM GC PD +Y+ L+ C+ R+ E
Sbjct: 6 IEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEVN 65
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ EM+ K DV+ Y+ +IGGFC++ + A F +M VTF LV GY
Sbjct: 66 RLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGY 125
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C AG VD A + ++ P+ T L+ C +R+ EA +LK R+ K P
Sbjct: 126 CNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLK-RMAKGECQPN 184
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y LI C GK A K+ EMVG G +P+ Y + I G+ G++E A + +
Sbjct: 185 VVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLE 244
Query: 483 EMFENQVRQED 493
+ N+ + D
Sbjct: 245 RLERNENCKAD 255
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 121/252 (48%), Gaps = 24/252 (9%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TF L+ G+ G + E + E+ C PD Y+Y+ L+ FC+ +RM EA ++
Sbjct: 113 PDVVTFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRV 172
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + +VV Y +I FC G+ A + EM +GV+ +++T+ L+ G+C
Sbjct: 173 LKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCG 232
Query: 365 AGDVDSAI-----LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
GD++ A L N+ C+ V++ LC R+ AL++L+A + + G
Sbjct: 233 TGDLEEAHKMLERLERNENCKADM----FAYRVMMDGLCRTGRMSAALELLEA-IKQSGT 287
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P Y+ LI+G + + KG P+ ++Y A I +EG E A
Sbjct: 288 PPRHDIYVALIRG-------------EMTLSRKG-RPNAKVYEAVIQELAREGRHEKANA 333
Query: 480 LRKEMFENQVRQ 491
L E+ N+ +
Sbjct: 334 LSDELLGNKASK 345
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 1/218 (0%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M G EP+ +Y+ L+ FC + L EEM D+ YNT+I G C+ G
Sbjct: 1 MTIWGIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGR 60
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ F EM +T+ L+ G+C+ ++ A +++DM ++ P+ T
Sbjct: 61 VPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPT 120
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
L+ C+ V +A +L+ +V P +Y L+ G C+ +M EA +V M
Sbjct: 121 LVEGYCNAGLVDDAERLLE-EIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKG 179
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+P++ IY+A ID + G +A L +EM N V+
Sbjct: 180 ECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQ 217
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 43/264 (16%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR----- 299
P+++T+N L+ G + G +V ++ EM C PD +YS L+ FC+ R+
Sbjct: 43 PDINTYNTLIDGLCKTGRVPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTL 102
Query: 300 ------------------------------EAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+AE+L EE+ + DV Y +++ GFC+
Sbjct: 103 FDDMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCK 162
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
+ M A + M + + V + L++ +C AG A + +M G +P T
Sbjct: 163 VKRMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAIT 222
Query: 390 IEVLIGELCDKRRVFEALDIL----KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
LIG C + EA +L + K +F +Y ++ GLC G+M AL++
Sbjct: 223 YRSLIGGFCGTGDLEEAHKMLERLERNENCKADMF----AYRVMMDGLCRTGRMSAALEL 278
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYM 469
+ G P +IY A I G M
Sbjct: 279 LEAIKQSGTPPRHDIYVALIRGEM 302
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL-GCEPDCYSYSVLMAVFCEERRMREA 301
V+PN T+ +L+ GF G E+ + + R C+ D ++Y V+M C RM A
Sbjct: 216 VQPNAITYRSLIGGFCGTGDLEEAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAA 275
Query: 302 EKLWEEMRDKNV--EHDVVAYNTIIGG 326
+L E ++ HD+ Y +I G
Sbjct: 276 LELLEAIKQSGTPPRHDI--YVALIRG 300
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 187/421 (44%), Gaps = 42/421 (9%)
Query: 66 RSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPAR 125
RSGL S+ + +L RFF + + +HS Y +I L + R G
Sbjct: 106 RSGLPERVLSRCG----DAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVW 161
Query: 126 DVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVR 185
+I + EN L P VF +L++ V+ ++K V+++
Sbjct: 162 ALIEEMRK--ENPYML---------------TPEVFIVLMRRFASVRMVKK---AVEVLD 201
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
+ G L+ + + V ++ ++ VR P
Sbjct: 202 EMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM-----------------RVRFNP 244
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ F +L+ G+ REG + + V V++ G EPD Y+ L+ + + +MR+A L
Sbjct: 245 NLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLL 304
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM+ N + ++ +I FC+ +M A F EM SG E+ VT+ L++G+C+
Sbjct: 305 AEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKW 364
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G+ D A + +DM +KG +P + ++ K + E +++++ + K G P
Sbjct: 365 GNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIE-EMRKIGCVPDLNI 423
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I+ +C+ G ++EA+++ EM G P L+ Y + G++ +G + A KEM
Sbjct: 424 YNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMV 483
Query: 486 E 486
E
Sbjct: 484 E 484
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 147/351 (41%), Gaps = 43/351 (12%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
+L + ++++ R I A+ V+ V ++ +P + ++ L+ Y + G FDL
Sbjct: 245 NLRHFTSLLYGWCREGKIMEAKHVL-VQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDL 303
Query: 164 L-----IKCCLEVKNI----------EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
L + C + EK++ + I + G V T LI +
Sbjct: 304 LAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCK 363
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVED 268
YEI ++ D P+ ++ +M+ ++ E+ +
Sbjct: 364 WGNTDKAYEILDDMIQKGHD----------------PSQLSYLCIMMAHEKKEELEECME 407
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
+ EM ++GC PD Y+ ++ + C+ ++EA +LW EM+ + + Y ++ GF
Sbjct: 408 LIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFL 467
Query: 329 EIGEMARAEEFFREMGLSGVESSSV--TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
G + A ++F+EM G+ S+ T + L N RA ++ A +++ M KG E
Sbjct: 468 SQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELN 527
Query: 387 GSTIEVLIGELCDKRRVFEA----LDILKARVVKFGLFPTEKSYMFLIKGL 433
S + I L V EA LD++ A L P ++ L++GL
Sbjct: 528 VSAWTIWIHALFSNGHVKEACSYCLDMMDA-----DLMPQPDTFAKLMRGL 573
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 126/240 (52%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T++ ++ G + G+ + +M GC+P+ YS ++ C+++ + EA +
Sbjct: 80 PDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEF 139
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM ++ + +VV Y++I+ GFC +G A F++M V +VTF LV+G +
Sbjct: 140 LSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSK 199
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A V+ M KG EP +T L+ C + ++ EA + V K G P+ +
Sbjct: 200 EGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRK-GCAPSVR 258
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
SY LIKG C+ G+++EA + AEM K P YS + G+ ++G + A L +EM
Sbjct: 259 SYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEM 318
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 128/246 (52%), Gaps = 1/246 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNV ++ ++ ++ + + EM G P+ +YS ++ FC R EA
Sbjct: 114 KPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATS 173
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+++M ++NV D V +N ++ G + G + A+ F M GVE + T+ L++GYC
Sbjct: 174 LFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYC 233
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+D A ++N M RKG P + +LI C R+ EA +L A + L P
Sbjct: 234 SQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLL-AEMSHKALTPDT 292
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+KG C++G+ ++A K+ EM G P L YS +DG K+G+++ A L K
Sbjct: 293 VTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKA 352
Query: 484 MFENQV 489
M E+++
Sbjct: 353 MQESKI 358
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 135/262 (51%), Gaps = 3/262 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
G ++AT+ + V+R V P+ TFN L+ G +EG + + V+ M G EP+
Sbjct: 165 LGRSNEATSLFKQMVER--NVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNV 222
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+Y+ LM +C + +M EA+KL+ M K V +YN +I G C+ G + A+ E
Sbjct: 223 NTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAE 282
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M + +VT+ L+ G+C+ G A + +M G P+ T +++ LC +
Sbjct: 283 MSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGH 342
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ EA ++LKA + + + P Y LI+G+C GK+E A ++ + + KG +P + Y+
Sbjct: 343 LDEAFELLKA-MQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYT 401
Query: 463 AFIDGYMKEGNVEMATMLRKEM 484
I G +K G A L ++M
Sbjct: 402 VMISGLLKGGLSNEACELFRDM 423
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 125/242 (51%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV+T+NALM G+ + ++ + ++ M R GC P SY++L+ C+ R+ EA+
Sbjct: 218 VEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAK 277
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EM K + D V Y+T++ GFC+ G A++ EM G+ +T+ +++G
Sbjct: 278 GLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGL 337
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G +D A + M EP +LI +C+ ++ A ++ VK G+ P
Sbjct: 338 CKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVK-GIQPD 396
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I GL + G EA ++ +M G P+ Y+ I G+++ G+ A L +
Sbjct: 397 VVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIE 456
Query: 483 EM 484
EM
Sbjct: 457 EM 458
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 124/242 (51%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN TF+ L+ G + ++ EM ++G EPD +YS ++ C+ A
Sbjct: 43 LQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAI 102
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L ++M +K + +VV Y+TII C+ + A EF EM G+ + VT+ +++G+
Sbjct: 103 QLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGF 162
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G + A ++ M + P+ T +L+ L + + EA + + + K G+ P
Sbjct: 163 CNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEK-GVEPN 221
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G C + +M+EA K+ MV KG PS+ Y+ I G+ K G ++ A L
Sbjct: 222 VNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLA 281
Query: 483 EM 484
EM
Sbjct: 282 EM 283
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 127/245 (51%), Gaps = 5/245 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV T+++++ GF G + ++ +M PD ++++L+ +E + EA+
Sbjct: 148 ISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQ 207
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++E M +K VE +V YN ++ G+C +M A++ F M G S ++ L+ G+
Sbjct: 208 CVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGH 267
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++G +D A + +M K P+ T L+ C R +A +L+ + +GL P
Sbjct: 268 CKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLE-EMRSYGLLPD 326
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y ++ GLC++G ++EA ++ M EP++ IY+ I G G +E A +
Sbjct: 327 LMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAA----R 382
Query: 483 EMFEN 487
E+F N
Sbjct: 383 ELFSN 387
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 1/222 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V ++N L+ G + G ++ + + EM+ PD +YS LM FC++ R ++A+KL
Sbjct: 255 PSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKL 314
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EEMR + D++ Y+ ++ G C+ G + A E + M S +E + + L+ G C
Sbjct: 315 LEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCN 374
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +++A +++++ KG +P+ T V+I L EA ++ + V G P
Sbjct: 375 FGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVH-GCLPNSC 433
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+Y +I+G G A ++ EMVG+GF + D
Sbjct: 434 TYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSD 475
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 128/252 (50%), Gaps = 7/252 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGA--FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
+RP+V+T L+ F F V M +LG +P+ ++S L+ + ++
Sbjct: 5 NIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A KL++EM E DV+ Y+TII G C++G A + ++M G + + V + ++
Sbjct: 65 DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+ C+ + A+ ++M +G P T ++ C+ R EA + K ++V+ +
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFK-QMVERNV 183
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P ++ L+ GL +EG + EA V M+ KG EP++ Y+A +DGY + ++ A
Sbjct: 184 MPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEA-- 241
Query: 480 LRKEMFENQVRQ 491
+++F VR+
Sbjct: 242 --QKLFNIMVRK 251
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ PN+ + L+ G G E +++ + G +PD +Y+V+++ + EA
Sbjct: 357 KIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEA 416
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+L+ +M + YN II GF G+ + A EM G + S TF+ L
Sbjct: 417 CELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 125/240 (52%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + T+NAL+ G + G E+ D+ ++ GC PD +Y+ L+ +E+R EA KL
Sbjct: 198 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 257
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++EM + + D V Y +I G + G++ +A ++ M G VT +++G C+
Sbjct: 258 FKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCK 317
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG + +A+ ++ M +G P LI LC R++ AL++L A++ K P
Sbjct: 318 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML-AQMKKAFCTPDTI 376
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI GLC+ G +E A EM+ G +P + Y+ + G+ K GN + A + +M
Sbjct: 377 TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDM 436
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 121/244 (49%), Gaps = 7/244 (2%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARL---GCEPDCYSYSVLMAVFCEERRMREAE 302
++HT+ A++ + +K++D M ++ GC P +Y+ L+ C+ R+ EA
Sbjct: 164 DIHTYTAIVDWLAKN---KKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 220
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L ++ D DVV Y ++I G + A + F+EM L G+ +V + L+ G
Sbjct: 221 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGL 280
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+AG + A VY M +G P+ T+ +I LC R+ A+ I K+ + GL P
Sbjct: 281 LQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR-GLAPN 339
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E Y LI GLC+ KM+ AL++ A+M P Y+ IDG K G+VE A
Sbjct: 340 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 399
Query: 483 EMFE 486
EM E
Sbjct: 400 EMLE 403
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 143/309 (46%), Gaps = 17/309 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++E +D++R ++ G + V T +LI + + K Y++++E+ A G+
Sbjct: 215 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM------ALRGLVL 268
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D + AL+ G + G + V+ M GC PD + S ++ C+
Sbjct: 269 DTV----------CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 318
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ A ++++ M + + + V Y+ +I G C+ +M A E +M + ++T+
Sbjct: 319 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 378
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C++GDV++A +++M G +P+ T +L+ C A + +
Sbjct: 379 NILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFD-DMS 437
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
P +Y LI GLC+ ++ +A M +G P +YS+ +DG K G +E
Sbjct: 438 SSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLE 497
Query: 476 MATMLRKEM 484
ML EM
Sbjct: 498 GGCMLFDEM 506
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 2/211 (0%)
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
R G + ++ + L+ VF +R REA L + DV +N +I G+C E
Sbjct: 52 RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPE 111
Query: 335 RAEEFFREMGLS-GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
A REM GV S T +++G C++G V +A+ + G + T +
Sbjct: 112 EAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAI 171
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ L +++ +A+ +++ ++ G PT +Y L+ GLC+ G++EEA+ + ++V G
Sbjct: 172 VDWLAKNKKIQDAVALME-KITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 230
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P + Y++ IDG KE A L KEM
Sbjct: 231 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 261
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+V+T+N L+ GF + G + V+ +M+ C P+ +Y L++ C+ R++ +A
Sbjct: 407 KPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASL 466
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ M+++ D Y++++ G C+ G++ F EM SGV +S T L+ C
Sbjct: 467 YFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQ-TRTRLIFHLC 525
Query: 364 RAGDVDSAILVYNDMCRKGF 383
+A VD A+ ++N + ++G
Sbjct: 526 KANRVDEAVSLFNAIRKEGM 545
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%)
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
F P+ T VLI C R EA +++ +G+ P+ K++ ++ GLC+ GK+ A
Sbjct: 90 FLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAA 149
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ G + Y+A +D K ++ A L +++ N
Sbjct: 150 MDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITAN 194
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 151/298 (50%), Gaps = 17/298 (5%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
+G++ + T N LI G ++ R++ +KR ++ PNV T
Sbjct: 390 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDM--------------IKR--KINPNVVT 433
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F+ L+ F +EG + E++ EM G PD +Y+ L+ FC+E + +A ++ + M
Sbjct: 434 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 493
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + ++ +N +I G+C+ + E FR+M L GV + +VT+ L+ G+C G ++
Sbjct: 494 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 553
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A ++ +M + P T ++L+ LCD +AL+I + ++ K + Y +
Sbjct: 554 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE-KIEKSKMELDIGIYNII 612
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
I G+C K+++A + + KG +P ++ Y+ I G K+G + A +L ++M E+
Sbjct: 613 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 670
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 3/250 (1%)
Query: 237 VKRVVRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
V R+V + +P++ T N L+ G G + + +M GC+P+ +Y ++ V C+
Sbjct: 279 VDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 338
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ A +L +M ++N++ D V Y+ II G C+ G + A F EM + G+ ++ +T
Sbjct: 339 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 398
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ G+C AG D + DM ++ P T VLI + ++ EA ++ K +
Sbjct: 399 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK-EM 457
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ G+ P +Y LI G C+E +++A ++ MV KG +P++ ++ I+GY K +
Sbjct: 458 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 517
Query: 475 EMATMLRKEM 484
+ L ++M
Sbjct: 518 DDGLELFRKM 527
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 134/242 (55%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+ +L+ GF +E +K + M GC+P+ ++++L+ +C+ R+ +
Sbjct: 462 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 521
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ +M + V D V YNT+I GFCE+G++ A+E F+EM V + VT++ L++G
Sbjct: 522 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 581
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G+ + A+ ++ + + E + ++I +C+ +V +A D+ + +K G+ P
Sbjct: 582 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPG 640
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
K+Y +I GLC++G + EA + +M G P Y+ I ++ +G+ + L +
Sbjct: 641 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 700
Query: 483 EM 484
E+
Sbjct: 701 EL 702
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 129/252 (51%), Gaps = 3/252 (1%)
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
A + +GK +K + PN TF+ L+ G EG + ++ M +G +PD + + L
Sbjct: 240 AFSAMGKIIK--LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 297
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ C + EA L ++M + + + V Y ++ C+ G+ A A E R+M +
Sbjct: 298 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 357
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+ +V + +++G C+ G +D+A ++N+M KG T +LIG C+ R +
Sbjct: 358 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 417
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+L+ ++K + P ++ LI +EGK+ EA ++ EM+ +G P Y++ IDG+
Sbjct: 418 LLR-DMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 476
Query: 469 MKEGNVEMATML 480
KE +++ A +
Sbjct: 477 CKENHLDKANQM 488
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 121/237 (51%), Gaps = 5/237 (2%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
++ ++ G + G+ + +++ EM G + +Y++L+ FC R + KL +M
Sbjct: 364 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 423
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ + +VV ++ +I F + G++ AEE +EM G+ ++T+ L++G+C+ +D
Sbjct: 424 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 483
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + + M KG +P T +LI C R+ + L++ + ++ G+ +Y L
Sbjct: 484 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR-GVVADTVTYNTL 542
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
I+G CE GK+ A ++ EMV + P++ Y +DG G E A E+FE
Sbjct: 543 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL----EIFE 595
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 109/218 (50%), Gaps = 1/218 (0%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
++ +LG EP+ ++S L+ C E R+ EA +L + M + + D++ NT++ G C G
Sbjct: 246 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 305
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A A +M G + ++VT+ ++N C++G A+ + M + + +
Sbjct: 306 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 365
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
++I LC + A ++ +K G+ +Y LI G C G+ ++ K+ +M+
Sbjct: 366 IIIDGLCKHGSLDNAFNLFNEMEMK-GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 424
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ P++ +S ID ++KEG + A L KEM +
Sbjct: 425 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 462
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 21/278 (7%)
Query: 119 RLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEK 176
R I P V + S + KL+ E L K G AP + LI + +++K
Sbjct: 425 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 484
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
VD +++S+G + T N LI + + G E++R++ + G+ D
Sbjct: 485 ANQMVD---LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM------SLRGVVAD 535
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
T+N L+ GF G ++++ EM P+ +Y +L+ C+
Sbjct: 536 TV----------TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 585
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+A +++E++ +E D+ YN II G C ++ A + F + L GV+ T+
Sbjct: 586 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 645
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
++ G C+ G + A L++ M G P+G T +LI
Sbjct: 646 IMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 683
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 112/252 (44%), Gaps = 7/252 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P V F+ L + ++ V + +M G + Y+ S+++ FC R++ A
Sbjct: 181 RPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLA 240
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++ E + + ++T+I G C G ++ A E M G + +T LVNG
Sbjct: 241 FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNG 300
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA---RVVKFG 418
C +G A+L+ + M G +P T ++ +C + A+++L+ R +K
Sbjct: 301 LCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 360
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
Y +I GLC+ G ++ A + EM KG ++ Y+ I G+ G +
Sbjct: 361 AV----KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 416
Query: 479 MLRKEMFENQVR 490
L ++M + ++
Sbjct: 417 KLLRDMIKRKIN 428
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 151/298 (50%), Gaps = 17/298 (5%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
+G++ + T N LI G ++ R++ +KR ++ PNV T
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDM--------------IKR--KINPNVVT 335
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F+ L+ F +EG + E++ EM G PD +Y+ L+ FC+E + +A ++ + M
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + ++ +N +I G+C+ + E FR+M L GV + +VT+ L+ G+C G ++
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A ++ +M + P T ++L+ LCD +AL+I + ++ K + Y +
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE-KIEKSKMELDIGIYNII 514
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
I G+C K+++A + + KG +P ++ Y+ I G K+G + A +L ++M E+
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 3/250 (1%)
Query: 237 VKRVVRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
V R+V + +P++ T N L+ G G + + +M GC+P+ +Y ++ V C+
Sbjct: 181 VDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 240
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ A +L +M ++N++ D V Y+ II G C+ G + A F EM + G+ ++ +T
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 300
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ G+C AG D + DM ++ P T VLI + ++ EA ++ K +
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK-EM 359
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ G+ P +Y LI G C+E +++A ++ MV KG +P++ ++ I+GY K +
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 475 EMATMLRKEM 484
+ L ++M
Sbjct: 420 DDGLELFRKM 429
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 134/242 (55%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+ +L+ GF +E +K + M GC+P+ ++++L+ +C+ R+ +
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 423
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ +M + V D V YNT+I GFCE+G++ A+E F+EM V + VT++ L++G
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G+ + A+ ++ + + E + ++I +C+ +V +A D+ + +K G+ P
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPG 542
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
K+Y +I GLC++G + EA + +M G P Y+ I ++ +G+ + L +
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602
Query: 483 EM 484
E+
Sbjct: 603 EL 604
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 129/252 (51%), Gaps = 3/252 (1%)
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
A + +GK +K + PN TF+ L+ G EG + ++ M +G +PD + + L
Sbjct: 142 AFSAMGKIIK--LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 199
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ C + EA L ++M + + + V Y ++ C+ G+ A A E R+M +
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+ +V + +++G C+ G +D+A ++N+M KG T +LIG C+ R +
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+L+ ++K + P ++ LI +EGK+ EA ++ EM+ +G P Y++ IDG+
Sbjct: 320 LLR-DMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 469 MKEGNVEMATML 480
KE +++ A +
Sbjct: 379 CKENHLDKANQM 390
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 124/244 (50%), Gaps = 5/244 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ + ++ ++ G + G+ + +++ EM G + +Y++L+ FC R +
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL +M + + +VV ++ +I F + G++ AEE +EM G+ ++T+ L++G+
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ +D A + + M KG +P T +LI C R+ + L++ + ++ G+
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR-GVVAD 437
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI+G CE GK+ A ++ EMV + P++ Y +DG G E A
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL---- 493
Query: 483 EMFE 486
E+FE
Sbjct: 494 EIFE 497
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 118/244 (48%), Gaps = 1/244 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N++T + ++ F R ++ +LG EP+ ++S L+ C E R+ EA +L
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M + + D++ NT++ G C G+ A A +M G + ++VT+ ++N C++
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G A+ + M + + + ++I LC + A ++ +K G+ +
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK-GITTNIIT 300
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI G C G+ ++ K+ +M+ + P++ +S ID ++KEG + A L KEM
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 486 ENQV 489
+
Sbjct: 361 HRGI 364
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 138/315 (43%), Gaps = 15/315 (4%)
Query: 185 RMLMSRGLSVKVSTC-NALIWEVSRGKGVISGYEI-YRE-----VFGLDSDATAGIGKDV 237
R+L + L + + C N L + RG S + YRE + + +D + +D+
Sbjct: 20 RLLETGTLRIALINCPNELSFCCERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDM 79
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
R P V F+ L + ++ V + +M G + Y+ S+++ FC R+
Sbjct: 80 IHS-RPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRK 138
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A ++ E + + ++T+I G C G ++ A E M G + +T
Sbjct: 139 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 198
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA---RV 414
LVNG C +G A+L+ + M G +P T ++ +C + A+++L+ R
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+K Y +I GLC+ G ++ A + EM KG ++ Y+ I G+ G
Sbjct: 259 IKLDAV----KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 475 EMATMLRKEMFENQV 489
+ L ++M + ++
Sbjct: 315 DDGAKLLRDMIKRKI 329
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 142/313 (45%), Gaps = 24/313 (7%)
Query: 119 RLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEK 176
R I P V + S + KL+ E L K G AP + LI + +++K
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATA--- 231
VD +++S+G + T N LI + + G E++R++ G+ +D
Sbjct: 387 ANQMVD---LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 232 -----------GIGKDVKRVV---RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
+ K++ + + +V PN+ T+ L+ G G EK +++ ++ +
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
E D Y++++ C ++ +A L+ + K V+ V YN +IGG C+ G ++ AE
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
FR+M G T+ L+ + GD ++ + ++ R GF + STI+++I L
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Query: 398 CDKRRVFEALDIL 410
D R LD+L
Sbjct: 624 SDGRLKKSFLDML 636
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
++M L G+ + T ++N +CR + A + + G+EP T LI LC +
Sbjct: 112 KQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLE 171
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
RV EAL+++ R+V+ G P + L+ GLC GK EA+ + +MV G +P+
Sbjct: 172 GRVSEALELVD-RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 230
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
Y ++ K G +A L ++M E ++ +
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLD 262
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 187/428 (43%), Gaps = 50/428 (11%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI 128
++P ++ L N LAL FF + + + ++ SY +I L + + +++
Sbjct: 111 VSPALVLEVLKRLSNAGALALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNLV 170
Query: 129 RVALRSPENDPKLK------LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVD 182
ND K K F ++ + Y G K++ ++
Sbjct: 171 --------NDMKRKGVLTKETFALISRRYARSG--------------------KVKEAMN 202
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+ GL ++ + N L+ + + + V+S ++ D ++ R
Sbjct: 203 TFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVF----------------DKMKIRR 246
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
P++ ++ L+ G+ +E K+++V+ EM G EPD +Y +L+ +C+ R+ +A
Sbjct: 247 FVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAI 306
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ EM KN + + T+I G + ++ A EFFR SG + T+ +V Y
Sbjct: 307 ELFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAY 366
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C + +D A + ++M + G P T ++++ L + EA + + + PT
Sbjct: 367 CWSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPT 426
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +++ C K+E A+KV M KG P + ++S I+ E +++A +
Sbjct: 427 VSTYDIIVRMFCNMDKVESAIKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIACKYFQ 486
Query: 483 EMFENQVR 490
EM + +R
Sbjct: 487 EMLDVGIR 494
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 106/241 (43%), Gaps = 25/241 (10%)
Query: 140 KLKLFEVLVKTYRE-----CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSV 194
K++ ++ ++ +RE C +P +F LI + ++ ++ ++ R + G +
Sbjct: 298 KVRKYDDAIELFREMESKNCQPSPHIFCTLING---LGSVRRLSEALEFFRRSKASGFAP 354
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALM 254
+ T NA++ + Y + +D +G+G PN T++ ++
Sbjct: 355 ETPTYNAVVGAYCWSMRIDDAYRM------VDEMRKSGVG----------PNSRTYDIIL 398
Query: 255 VGFYREGAFEKVEDVWVEMA-RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ + V+ +M+ CEP +Y +++ +FC ++ A K+W+ M+ K V
Sbjct: 399 HHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKGV 458
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
+ ++ +I C ++ A ++F+EM G+ + F HL G D+ +L
Sbjct: 459 HPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPAALFSHLKQALIEDGRKDTVVL 518
Query: 374 V 374
+
Sbjct: 519 L 519
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 118/297 (39%), Gaps = 41/297 (13%)
Query: 142 KLFEVLVKTYRECGSAPFVFD---------------LLIKCCLEVKNIEKIETCVDIVRM 186
+L + L+K+ R+ SA VFD +L++ + KN+ K++ ++ R
Sbjct: 221 RLLDTLIKS-RQVLSAQNVFDKMKIRRFVPDIKSYTILLEGWGQEKNLLKLD---EVYRE 276
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA--------GIGKDVK 238
+ G V T LI + + E++RE+ + + G+G V+
Sbjct: 277 MKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLG-SVR 335
Query: 239 RVVRV------------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
R+ P T+NA++ + + + EM + G P+ +Y
Sbjct: 336 RLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYD 395
Query: 287 VLMAVFCEERRMREAEKLWEEMR-DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+++ + + EA ++E+M ++ E V Y+ I+ FC + ++ A + + M
Sbjct: 396 IILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKA 455
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
GV F L+N C +D A + +M G P + L L + R
Sbjct: 456 KGVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPAALFSHLKQALIEDGR 512
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 187/421 (44%), Gaps = 42/421 (9%)
Query: 66 RSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPAR 125
RSGL S+ + +L RFF + + +HS Y +I L + R G
Sbjct: 129 RSGLPERVLSRCG----DAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVW 184
Query: 126 DVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVR 185
+I + EN L P VF +L++ V+ ++K V+++
Sbjct: 185 ALIEEMRK--ENPYML---------------TPEVFIVLMRRFASVRMVKK---AVEVLD 224
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
+ G L+ + + V ++ ++ VR P
Sbjct: 225 EMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM-----------------RVRFNP 267
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ F +L+ G+ REG + + V V++ G EPD Y+ L+ + + +MR+A L
Sbjct: 268 NLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLL 327
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM+ N + ++ +I FC+ +M A F EM SG E+ VT+ L++G+C+
Sbjct: 328 AEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKW 387
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G+ D A + +DM +KG +P + ++ K + E +++++ + K G P
Sbjct: 388 GNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIE-EMRKIGCVPDLNI 446
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I+ +C+ G ++EA+++ EM G P L+ Y + G++ +G + A KEM
Sbjct: 447 YNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMV 506
Query: 486 E 486
E
Sbjct: 507 E 507
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 147/351 (41%), Gaps = 43/351 (12%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
+L + ++++ R I A+ V+ V ++ +P + ++ L+ Y + G FDL
Sbjct: 268 NLRHFTSLLYGWCREGKIMEAKHVL-VQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDL 326
Query: 164 L-----IKCCLEVKNI----------EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
L + C + EK++ + I + G V T LI +
Sbjct: 327 LAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCK 386
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVED 268
YEI ++ D P+ ++ +M+ ++ E+ +
Sbjct: 387 WGNTDKAYEILDDMIQKGHD----------------PSQLSYLCIMMAHEKKEELEECME 430
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
+ EM ++GC PD Y+ ++ + C+ ++EA +LW EM+ + + Y ++ GF
Sbjct: 431 LIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFL 490
Query: 329 EIGEMARAEEFFREMGLSGVESSSV--TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
G + A ++F+EM G+ S+ T + L N RA ++ A +++ M KG E
Sbjct: 491 SQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELN 550
Query: 387 GSTIEVLIGELCDKRRVFEA----LDILKARVVKFGLFPTEKSYMFLIKGL 433
S + I L V EA LD++ A L P ++ L++GL
Sbjct: 551 VSAWTIWIHALFSNGHVKEACSYCLDMMDA-----DLMPQPDTFAKLMRGL 596
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 190/416 (45%), Gaps = 47/416 (11%)
Query: 74 FSQIALGL--KNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVA 131
+S I GL N +AL+ + K CK ++ +Y TII L + RL+ A D
Sbjct: 48 YSTIINGLCKMGNTTMALQLLKKMEEKG-CKPNVVAYNTIIDSLCKDRLVTEAMD----- 101
Query: 132 LRSPENDPKLKLFEVLVKTYRECGSAPFVF---DLLIKCCLEVKNIEKIETCVDIVRMLM 188
F +VK G P VF +L C N+ ++ + + ++
Sbjct: 102 -----------FFSEMVKE----GIPPDVFTYSSILHGFC----NLGRVNEATSLFKQMV 142
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVH 248
R + T LI + + + + + ++ + G+ P+V+
Sbjct: 143 ERNVIPNKVTFTILIDGLCKKRMISEAWLVFETM------TEKGL----------EPDVY 186
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+NAL+ G+ ++ + ++ M R GC P+ SY++L+ C+ R+ EA+ L EM
Sbjct: 187 TYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEM 246
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
K++ D+ Y+T++ GFC++G A+E +EM G+ + +T+ +++G C+ G +
Sbjct: 247 SHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHL 306
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D A + M EP +LI +C ++ A ++ VK G+ PT +Y
Sbjct: 307 DEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVK-GIQPTVVTYTV 365
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+I GL + G EA ++ EM G P+ Y+ I G+++ G+ A L +EM
Sbjct: 366 MISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM 421
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 124/242 (51%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P + TFN L+ G + ++ EM ++G EPD +YS ++ C+ A
Sbjct: 6 LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L ++M +K + +VVAYNTII C+ + A +FF EM G+ T+ +++G+
Sbjct: 66 QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G V+ A ++ M + P T +LI LC KR + EA + + K GL P
Sbjct: 126 CNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK-GLEPD 184
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G C +M+EA K+ M KG P++ Y+ I+G+ K G ++ A L
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244
Query: 483 EM 484
EM
Sbjct: 245 EM 246
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 129/246 (52%), Gaps = 1/246 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNV +N ++ ++ + D + EM + G PD ++YS ++ FC R+ EA
Sbjct: 77 KPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATS 136
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+++M ++NV + V + +I G C+ ++ A F M G+E T+ LV+GYC
Sbjct: 137 LFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYC 196
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+D A ++N M RKG P + +LI C R+ EA +L A + L P
Sbjct: 197 SRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL-AEMSHKSLTPDI 255
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L++G C+ G+ +EA ++ EM G P+L YS +DG K G+++ A L K
Sbjct: 256 FTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKA 315
Query: 484 MFENQV 489
M E+++
Sbjct: 316 MQESKI 321
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 130/245 (53%), Gaps = 5/245 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V T+++++ GF G + ++ +M P+ ++++L+ C++R + EA
Sbjct: 111 IPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAW 170
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++E M +K +E DV YN ++ G+C +M A++ F M G + ++ L+NG+
Sbjct: 171 LVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGH 230
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++G +D A + +M K P+ T L+ C R EA ++LK + +GL P
Sbjct: 231 CKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLK-EMCSYGLLPN 289
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y ++ GLC+ G ++EA ++ M EP++ IY+ I+G G +E A +
Sbjct: 290 LITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAA----R 345
Query: 483 EMFEN 487
E+F N
Sbjct: 346 ELFSN 350
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 3/265 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
G ++AT+ + V+R V PN TF L+ G ++ + V+ M G EPD
Sbjct: 128 LGRVNEATSLFKQMVER--NVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDV 185
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
Y+Y+ L+ +C +M EA+KL+ M K +V +YN +I G C+ G + A+ E
Sbjct: 186 YTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAE 245
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M + T+ L+ G+C+ G A + +MC G P T +++ LC
Sbjct: 246 MSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGH 305
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ EA ++LKA + + + P Y LI+G+C GK+E A ++ + + KG +P++ Y+
Sbjct: 306 LDEAFELLKA-MQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYT 364
Query: 463 AFIDGYMKEGNVEMATMLRKEMFEN 487
I G +K G A L +EM N
Sbjct: 365 VMISGLLKGGLSNEACELFREMAVN 389
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 113/208 (54%), Gaps = 1/208 (0%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M +LG +P +++ L++ C + ++ +A KL++EM E DV+ Y+TII G C++G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
A + ++M G + + V + +++ C+ V A+ +++M ++G P+ T
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
++ C+ RV EA + K ++V+ + P + ++ LI GLC++ + EA V M K
Sbjct: 121 ILHGFCNLGRVNEATSLFK-QMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK 179
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATML 480
G EP + Y+A +DGY ++ A L
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKL 207
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G++ + VTF L++G C + A+ ++++M + G EP+ T +I LC A
Sbjct: 5 GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L +LK ++ + G P +Y +I LC++ + EA+ +EMV +G P + YS+ +
Sbjct: 65 LQLLK-KMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123
Query: 467 GYMKEGNVEMATMLRKEMFENQV 489
G+ G V AT L K+M E V
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNV 146
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%)
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K GL PT ++ L+ GLC + K+ +A+K+ EMV G EP + YS I+G K GN
Sbjct: 3 KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62
Query: 476 MATMLRKEMFE 486
MA L K+M E
Sbjct: 63 MALQLLKKMEE 73
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ PN+ + L+ G G E +++ + G +P +Y+V+++ + EA
Sbjct: 320 KIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEA 379
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+L+ EM + YN II GF G+ A EM G + S TF L
Sbjct: 380 CELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 132/241 (54%), Gaps = 3/241 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N LM G+ + G + + + E+ + G EP+ ++YS+++ +C+ ++ EA ++
Sbjct: 206 PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEV 265
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M + N + V +NT+I GFC+ G + A + F EM G +++ VT+ L++ C+
Sbjct: 266 FMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK 325
Query: 365 A-GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G V +A+ ++N + G P T LI CD RR+ EA+ K P
Sbjct: 326 KRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCA--PNV 383
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI GLC+ +M+EA K +M G+ P++ Y I+G+ K G ++ A + ++
Sbjct: 384 ITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEK 443
Query: 484 M 484
M
Sbjct: 444 M 444
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 22/256 (8%)
Query: 191 GLSVKVSTCNALIWEVSRGKG-VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
G + T N LI + + +G V + +++ ++ G AG+ P + T
Sbjct: 308 GCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEG------AGL----------TPTIVT 351
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N+L+ GF + + EM C P+ +YS+L+ C+ RRM+EA K E+M+
Sbjct: 352 YNSLIQGFCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMK 410
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
VV Y +I GFC+ GE+ A FF +M L+G ++V F L++G C+A +
Sbjct: 411 AHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERAN 470
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+ + M +G +P+ T LI LC RV +A + P ++ FL
Sbjct: 471 DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACA----PNVTTFNFL 526
Query: 430 IKGLCEEGKMEEALKV 445
I+GLC + K+EEA +
Sbjct: 527 IRGLCAQKKVEEARNI 542
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 117/248 (47%), Gaps = 8/248 (3%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN HT+N L+ GF + G + V+ +M G P+ + + L+ CE +M A KL
Sbjct: 30 PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 89
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC- 363
+ EM+ ++N ++ GF G + A ++M S ++ T+ ++ G C
Sbjct: 90 FREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCW 149
Query: 364 ---RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
A ++ A+ + +M G EP+ + +L+ L D R+ EA + A
Sbjct: 150 ENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---- 205
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y L+ G C+ G+ EA + E++ G+EP++ YS I+ Y K VE A +
Sbjct: 206 PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEV 265
Query: 481 RKEMFENQ 488
+M E+
Sbjct: 266 FMKMIESN 273
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 8/240 (3%)
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
NAL+ G ++ ++ E+ P+ ++Y+VL+ FC+ +M +A ++ +M+
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
+ + NT++ G CEIG+M+ A + FREM +S + L+ G+ AG V
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELC----DKRRVFEALDILKARVVKFGLFPTEKSY 426
A+ DM + T +++ LC R+ +A++ K + G+ P +SY
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFK-EMKASGVEPDLESY 179
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
L+ L + G+M EA + + M P + Y+ +DGY K G A L KE+ +
Sbjct: 180 HILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 236
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 141/280 (50%), Gaps = 34/280 (12%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ P+V T+++L+ GF G + D++ M P+ Y++S+L+ FC+E ++REA
Sbjct: 228 RISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREA 287
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ + M KNV+ DVV YN+++ G+C + ++ +A+ F M GV ++ ++NG
Sbjct: 288 KNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMING 347
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD------------- 408
+C+ VD A+ ++ +M K P T L+ LC R AL+
Sbjct: 348 FCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSN 407
Query: 409 ---------------------ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+L ++ + G+ P +Y LI GLC+ G++++A KV
Sbjct: 408 IITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFE 467
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+++ KG+ P++ Y++ I+G+ +G + + +M +N
Sbjct: 468 DLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDN 507
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 129/243 (53%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
V+ +V T+N+LM G+ K + ++ MA+ G PD +SYS+++ FC+ + + EA
Sbjct: 298 NVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEA 357
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KL+EEM K + +VV YN+++ G C+ G + A E EM G S+ +T+ +++
Sbjct: 358 MKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDA 417
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ VD AI++ + KG +P+ T VLI LC R+ +A + + +VK G P
Sbjct: 418 ICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVK-GYSP 476
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI G C +G +E L + ++M G P+ Y I ++ + A L
Sbjct: 477 NIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLL 536
Query: 482 KEM 484
+EM
Sbjct: 537 REM 539
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 155/314 (49%), Gaps = 12/314 (3%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG--KDVKRVVR-- 242
++ +GL +K AL + K V G+++ + +G + +G K +++R
Sbjct: 133 ILIKGLCLKGEVHKALYFH---DKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRV 189
Query: 243 ----VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
VRPNV ++ ++ ++ D++ EM PD +YS L++ FC ++
Sbjct: 190 DGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKL 249
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+ A L+ M N+ +V ++ +I GFC+ G++ A+ M V+ VT+ L
Sbjct: 250 KYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSL 309
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++GYC V+ A ++N M ++G P+ + ++I C + V EA+ + + K
Sbjct: 310 MDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCK-Q 368
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+FP +Y L+ GLC+ G+ AL++ EM +G ++ Y++ +D K +V+ A
Sbjct: 369 IFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAI 428
Query: 479 MLRKEMFENQVRQE 492
+L ++ E ++ +
Sbjct: 429 VLLTKIKEKGIQPD 442
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 120/250 (48%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ T N LM F + G + V+ ++ + G PD ++++L+ C + + +A
Sbjct: 89 IKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKAL 148
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ + + D V+Y T+I G C +GE A + R + V + V + +++
Sbjct: 149 YFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSM 208
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ V+ A +Y +M K P+ T LI C ++ A+D+ R++ + P
Sbjct: 209 CKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFN-RMISDNINPN 267
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ LI G C+EGK+ EA V A M+ K + + Y++ +DGY V A L
Sbjct: 268 VYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFN 327
Query: 483 EMFENQVRQE 492
M + V +
Sbjct: 328 VMAQRGVTPD 337
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 1/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P F ++ + ++ + +M G +PD + ++LM F + ++ + +
Sbjct: 56 PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ ++ K D V + +I G C GE+ +A F ++ G + V++ L+NG CR
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ +A+ + + K P +I +C + V +A D L +V + P
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFD-LYCEMVSKRISPDVV 234
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C GK++ A+ + M+ P++ +S IDG+ KEG V A + M
Sbjct: 235 TYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVM 294
Query: 485 FENQVRQE 492
+ V+ +
Sbjct: 295 MKKNVKLD 302
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 34/277 (12%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
P+ TF L+ G +G K ++ G + D SY L+ C + A +
Sbjct: 125 HPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQ 184
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L + K V +VV Y+TII C+ + A + + EM + VT+ L++G+C
Sbjct: 185 LLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFC 244
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL--------KARVV 415
G + A+ ++N M P T +LI C + +V EA ++L K VV
Sbjct: 245 VVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVV 304
Query: 416 KF--------------------------GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
+ G+ P SY +I G C+ ++EA+K+ EM
Sbjct: 305 TYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEM 364
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
K P++ Y++ +DG K G A L EM +
Sbjct: 365 HCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHD 401
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 89/175 (50%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ PNV T+N+L+ G + G ++ EM G + +Y+ ++ C+ + +A
Sbjct: 368 QIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKA 427
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L ++++K ++ D+ Y +I G C++G + A++ F ++ + G + T+ L+NG
Sbjct: 428 IVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLING 487
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
+C G D + + + M G P T E+LI L +K +A +L+ + +
Sbjct: 488 FCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIAR 542
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 242 RVRP-NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
R +P N+ T+N+++ + +K + ++ G +PD ++Y+VL+ C+ R+ +
Sbjct: 402 RGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDD 461
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A+K++E++ K ++ Y ++I GFC G +M +G +++T+E L++
Sbjct: 462 AQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIH 521
Query: 361 GYCRAGDVDSAILVYNDMCRKGF 383
+ D A + +M +G
Sbjct: 522 SLFEKDENDKAEKLLREMIARGL 544
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/501 (25%), Positives = 213/501 (42%), Gaps = 95/501 (18%)
Query: 54 SKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIH 113
S+ +NH C L Q L LK P AL+ + ++K C ++ ++ +IH
Sbjct: 836 SQEGYNHDTYTCNCLL------QALLRLKR-PKDALQVY---RNKLCCSPNMFTFTILIH 885
Query: 114 ILSRARLIGPARDVIRVALRS--PEN-----------------DPKLKLFEVLVKTYREC 154
L RA IG A ++++ R P+N D L+LF K E
Sbjct: 886 GLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELF----KEMEES 941
Query: 155 GSAP---FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST------------- 198
GS P F + ++ ++ K++ +V ++S+G S V T
Sbjct: 942 GSCPPDVFTYSTIVDSLVKSG---KVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGK 998
Query: 199 ---CNALIWEVSRG---------KGVISG----------YEIYREVFG------------ 224
AL+ ++R +I G Y + E+
Sbjct: 999 LDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 1058
Query: 225 -LDSDATAGIGKDVKRVVRVR------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
LD+ G +D +V V PN+ T+N+L+ F ++ E+ + M + G
Sbjct: 1059 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 1118
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C P+ SY+ ++A C+ ++ E L E+M N D+V +NTII C+ + A
Sbjct: 1119 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAY 1178
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK-GFEPEGSTIEVLIGE 396
E F + SG + VT+ LV+G C++ D A + +M RK G P+ T +I
Sbjct: 1179 ELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDG 1238
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC +RV A + +++ GL P + +Y +I LC+ M+EA V M+ GF+P
Sbjct: 1239 LCKSKRVDRAYKLF-LQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDP 1297
Query: 457 SLEIYSAFIDGYMKEGNVEMA 477
Y IDG+ K GN++ A
Sbjct: 1298 GAITYGTLIDGFCKTGNLDKA 1318
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 141/310 (45%), Gaps = 19/310 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K+ D++ ++ RG V+ + LI + + + S E+ R G+D
Sbjct: 420 KLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMD--------- 470
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE-MARLGCEPDCYSYSVLMAVFCE 294
P+V ++ L+ + + E W++ M + C PD +Y+ ++ C+
Sbjct: 471 -------CAPDVVAYSILIHALCKAKRLPEAES-WLDVMVKNRCYPDVVTYNSVVDGLCK 522
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
RR+ +A L++ MR V DVV Y+ +I FC+ + A + M + VT
Sbjct: 523 SRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVT 582
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+NG C+AG VD A V+ +M G P T LI LC +V +A ++L+ +
Sbjct: 583 YSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEI-M 641
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
K P +Y LI GLC ++EEA +V EM KG P Y + K N+
Sbjct: 642 RKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNL 701
Query: 475 EMATMLRKEM 484
E+ L KEM
Sbjct: 702 ELVEQLLKEM 711
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 141/301 (46%), Gaps = 19/301 (6%)
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR-----------VVRVR-- 244
T + LI R ++ YE++ E+ A AG+ K + R V+ R
Sbjct: 163 TYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM 222
Query: 245 -----PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
P+ T+N ++ G + + + EM G P+ +SY+ ++ FC+ R+
Sbjct: 223 SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVE 282
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
A L E+M + DVV+Y T+I G C++ ++ A +M G + + +T+ LV
Sbjct: 283 NALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLV 342
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+G+CR GD+D A+ + M +G+ P T ++ C + + A +L+ +++ G
Sbjct: 343 DGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQM-MIQTGC 401
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y +I G C+ GK+ EA + +M+ +G P + S ID K ++ A
Sbjct: 402 PPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQE 461
Query: 480 L 480
L
Sbjct: 462 L 462
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 173/412 (41%), Gaps = 46/412 (11%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI 128
LT T ++ G++N AL FF + + H + ++ L R
Sbjct: 809 LTTTVVGKVLQGVRNG-DAALGFFDWATSQEGYNHDTYTCNCLLQALLR----------- 856
Query: 129 RVALRSPENDPKLKLFEVLVKTYRE---CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVR 185
L+ P++ ++ YR C F F +LI +I T ++++
Sbjct: 857 ---LKRPKD---------ALQVYRNKLCCSPNMFTFTILIHGLCRAGDIG---TAYELLK 901
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
+ G+ V N +I + + + S E+++E+ + P
Sbjct: 902 EMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEM---------------EESGSCPP 946
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V T++ ++ + G + + +M GC P+ +YS L+ C+ ++ EA L
Sbjct: 947 DVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 1006
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M ++V YNTII G C++G + A EM G + + VT+ L++ +C+
Sbjct: 1007 QRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC 1066
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + AI + M KG+ P T L+ C K V A +L + + K G P S
Sbjct: 1067 GKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK-GCVPNVVS 1125
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
Y +I GLC+ K+ E + + +M+ P + ++ ID K V++A
Sbjct: 1126 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIA 1177
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 128/283 (45%), Gaps = 40/283 (14%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPN T+N +M F R E+ V M + GC PD +YS +++ FC+ ++REA
Sbjct: 367 RPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHD 426
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR-EMGLSGV-------------- 348
L E+M + DV +T+I C+ + A+E R +G+
Sbjct: 427 LLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALC 486
Query: 349 ------ESSS--------------VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
E+ S VT+ +V+G C++ ++ A L+++ M G P+
Sbjct: 487 KAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVV 546
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
T ++I C + A +L+ R+ + P +Y LI GLC+ G +++A V E
Sbjct: 547 TYSIVIHSFCKDNNLDSAFKMLE-RMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQE 605
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
M+G G P+L Y+ IDG K VE A EM E +Q
Sbjct: 606 MLGCGCAPNLVTYNTLIDGLCKINKVEQAA----EMLEIMRKQ 644
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 134/297 (45%), Gaps = 20/297 (6%)
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTF 250
G + TCN L+ + R K ++YR PN+ TF
Sbjct: 839 GYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLC------------------CSPNMFTF 880
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
L+ G R G ++ EM R G + ++V++ C R++ A +L++EM +
Sbjct: 881 TILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEE 940
Query: 311 K-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ DV Y+TI+ + G++ A +M G + VT+ L++G C+AG +D
Sbjct: 941 SGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLD 1000
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + M R G P T +I C R+ EA +L+ +V G P +Y L
Sbjct: 1001 EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLE-EMVDGGCQPNVVTYTVL 1059
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ C+ GK E+A+ + MV KG+ P+L Y++ +D + K+ VE A L M +
Sbjct: 1060 LDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQ 1116
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 120/244 (49%), Gaps = 1/244 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV ++N ++ GF + E + +M GC PD SY+ ++ C+ ++ EA ++
Sbjct: 263 PNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRV 322
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M + + +V+ Y T++ GFC +G++ A E R+M G +++T+ ++++ +CR
Sbjct: 323 MDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCR 382
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D++ A V M + G P+ +I C ++ EA D+L+ ++++ G P
Sbjct: 383 RNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLE-QMIRRGCRPDVA 441
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LI LC+ ++ A ++ +G P + YS I K + A M
Sbjct: 442 CLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVM 501
Query: 485 FENQ 488
+N+
Sbjct: 502 VKNR 505
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 112/210 (53%), Gaps = 2/210 (0%)
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D +YS L++ F ++ A +L++EM K ++ + +I+ G C+ G+ + A F
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHF 219
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
REM + SVT+ ++NG ++ +D AI + +M GF P + ++ C
Sbjct: 220 REMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKA 278
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
RV AL +L+ V + G P SY +I GLC+ +++EA +V +M+ +G +P++
Sbjct: 279 NRVENALWLLEQMVTR-GCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVIT 337
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
Y +DG+ + G+++ A L ++M E R
Sbjct: 338 YGTLVDGFCRVGDLDGAVELVRKMTERGYR 367
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 113/244 (46%), Gaps = 2/244 (0%)
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+++ R P++ T+N ++ G + ++ ++++M G PD +YS++++ C+
Sbjct: 1217 REMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 1276
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R M EA + E M + + Y T+I GFC+ G + +A E + + G VT
Sbjct: 1277 WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVT 1336
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
F ++ + G + A + M R G P+ T L+ CD +A+D+ + +
Sbjct: 1337 FSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEV-M 1395
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEAL-KVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+ G P +Y L+ L ++ ++ L +V MV GF+ + E+ S E +
Sbjct: 1396 RQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEAD 1455
Query: 474 VEMA 477
V +
Sbjct: 1456 VRLG 1459
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 156/389 (40%), Gaps = 92/389 (23%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+Y+ +I L + R + A +V+ + L++ DP + L+ + + G
Sbjct: 1266 TYSIVISSLCKWRFMDEANNVLELMLKNG-FDPGAITYGTLIDGFCKTG----------- 1313
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI-WEVSRGKGVISGYEIYREVFGL 225
N++K ++I+++L+S+G V T + I W RG+ +G E+ L
Sbjct: 1314 ------NLDKA---LEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG-EL------L 1357
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
++ AG+ P+ T+N L+ GF E D++ M + GCEPD +Y
Sbjct: 1358 ETMLRAGL----------VPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATY 1407
Query: 286 SVLMAVFCEERRMRE--AE----------KLWEEMRDK-----NVEHDVVAYNTIIGGFC 328
+ L+ +++ ++ AE KL E+ K VE DV I+ F
Sbjct: 1408 TTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFG 1467
Query: 329 EIGEMARAEEFF-------------------------------REMGLSGVESSSVTFEH 357
+ G A + F R MGL GVE +VTF
Sbjct: 1468 KCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLS 1527
Query: 358 LVNGYCRAGDVDSAILVYNDMCRK-GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L+ C AG +D+A+ + + R G EP +I L V EA D++ K
Sbjct: 1528 LLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLMLGMPCK 1587
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
P+ ++ L+ G E AL+V
Sbjct: 1588 ----PSAATWNCLLSAYKICGDFERALRV 1612
>gi|115453133|ref|NP_001050167.1| Os03g0363700 [Oryza sativa Japonica Group]
gi|108708311|gb|ABF96106.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113548638|dbj|BAF12081.1| Os03g0363700 [Oryza sativa Japonica Group]
Length = 564
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 167/375 (44%), Gaps = 16/375 (4%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
+R ALR+ D +LF + G A V L+ C E + ++ + D R
Sbjct: 155 AMRSALRAARPDLVFRLFSAFSSSPDFPGDAATVAFLVRACSAEGRPLDGLRLLRDGARR 214
Query: 187 LMSRGLSVKVSTCNALIWEVSRGK-----------GVISGYEIY-REVFGLDSDATAGIG 234
+ L A + GK G + IY R + GL +
Sbjct: 215 GVPPQLDAVADLVAAFSAAANFGKVSETLHLMIAAGSVPDTVIYQRIIHGLFAHKMGSEA 274
Query: 235 KDVKRVVRVRP-NVH--TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
V +++R NV T+ + G + G ++ +W EM G EP+ Y+Y L+A
Sbjct: 275 LRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGMEPNEYAYCSLVAY 334
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
+C+ A K+++EM K ++ V+ N ++ GFC G + A F EM G+E
Sbjct: 335 YCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHD 394
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+T+ L+ G C+AG + AI VY + G EP ST LI +C++ +V A+++LK
Sbjct: 395 VITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEEGQVDAAVELLK 454
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
K GL P + +I G C+ + E+ + A M+ K +P +++ ++
Sbjct: 455 VMHAK-GLEPLARINDSIINGFCKARRPEDGMAWLAGMLKKNLKPREHTFNSLVELLSSS 513
Query: 472 GNVEMATMLRKEMFE 486
G V+ A ++ MF+
Sbjct: 514 GRVDDALLVLNTMFK 528
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 102/245 (41%), Gaps = 36/245 (14%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P + L+ F F KV + M G PD Y ++ + EA
Sbjct: 216 VPPQLDAVADLVAAFSAAANFGKVSETLHLMIAAGSVPDTVIYQRIIHGLFAHKMGSEAL 275
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ E++ + D V Y T I G C++G + A + + EM G+E + + LV Y
Sbjct: 276 RVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGMEPNEYAYCSLVAYY 335
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+AGD + A VY++M KG + ST+ I
Sbjct: 336 CKAGDFEMARKVYDEMLGKGLKE--STVSCNI---------------------------- 365
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
L+ G C G+++EAL + EMV KG E + Y+ I G K G + A + +
Sbjct: 366 ------LVTGFCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYE 419
Query: 483 EMFEN 487
++ +
Sbjct: 420 QLLSS 424
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 83/219 (37%), Gaps = 36/219 (16%)
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
AR G P + + L+A F + + M D V Y II G
Sbjct: 212 ARRGVPPQLDAVADLVAAFSAAANFGKVSETLHLMIAAGSVPDTVIYQRIIHGLFAHKMG 271
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+ A F E+ L G +VT+ ++G C+ G +D A ++N+M KG E
Sbjct: 272 SEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGME--------- 322
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
P E +Y L+ C+ G E A KV EM+GKG
Sbjct: 323 ---------------------------PNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKG 355
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ S + + G+ G V+ A + +EM + + +
Sbjct: 356 LKESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHD 394
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 150/298 (50%), Gaps = 17/298 (5%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++ RGL V T N +I +S+ SG ++ G K +++V V PN
Sbjct: 158 MLVRGLQPNVYTYNVIINSLSK-----SG----------KANEALGFLKQMEKVGCV-PN 201
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V ++ L+ G+ G ++ V+ M GC P+ Y+Y+ LM +C+ R+ EA +L +
Sbjct: 202 VVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLD 261
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
E K + D+V + TII G C G A++ FR + G + +T+ L++G C+ G
Sbjct: 262 ETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHG 321
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
+++ A ++ +M R +P +LI LC ++ + ++ +R++ GL P +Y
Sbjct: 322 NLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELF-SRLIDEGLKPNVYTY 380
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
L+ LC+EG + EA K+ +M G P Y+ I G+++ + MA L +EM
Sbjct: 381 TALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEM 438
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 126/245 (51%), Gaps = 1/245 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV+T+N ++ + G + +M ++GC P+ +YS L+ +C +M EA
Sbjct: 163 LQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEAR 222
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ M K +V Y +++ G+C+I + A + E G+ VTF +++G
Sbjct: 223 SVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGL 282
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRAG +A ++ +C G P T VL+ LC + EA + + + + + P
Sbjct: 283 CRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQ-EMQRSTVKPN 341
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y LI LC+ GK+++ ++ + ++ +G +P++ Y+A + KEG + A L +
Sbjct: 342 LVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFR 401
Query: 483 EMFEN 487
+M E+
Sbjct: 402 KMEED 406
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 121/248 (48%), Gaps = 1/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ ++H+ + L+ F + V ++ +LG EP +++ L+ C E +M +
Sbjct: 93 IEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVM 152
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+++M + ++ +V YN II + G+ A F ++M G + V + L++GY
Sbjct: 153 MLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGY 212
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G +D A V++ M KG P T L+ C R+ EA+ +L + K GL P
Sbjct: 213 CLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRK-GLVPD 271
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ +I GLC G+ A ++ + G P++ Y +DG K GN+E A L +
Sbjct: 272 IVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQ 331
Query: 483 EMFENQVR 490
EM + V+
Sbjct: 332 EMQRSTVK 339
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 101/220 (45%), Gaps = 16/220 (7%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
IE+IE V ++ + +GL + T +I + R ++ +++R +
Sbjct: 250 IERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGH------ 303
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
PN+ T+ L+ G + G E+ ++ EM R +P+ Y++L+ C
Sbjct: 304 ----------TPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLC 353
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ ++++ ++L+ + D+ ++ +V Y ++G C+ G + A + FR+M G
Sbjct: 354 KCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKC 413
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+ ++ G+ + D A + +M +GF + +T +L
Sbjct: 414 AYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
FR M L V F L + R G ++ + + ++ G E + ++ +LI C
Sbjct: 50 FRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCH 109
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
RV L +L ++++K GL P+ ++ L+ GLC EGKM++ + + +M+ +G +P++
Sbjct: 110 LHRVDFGLSVL-SKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVY 168
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ I+ K G A K+M
Sbjct: 169 TYNVIINSLSKSGKANEALGFLKQM 193
>gi|449466251|ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 192/439 (43%), Gaps = 57/439 (12%)
Query: 26 FSTSSSTPPSDQS-HNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLK-- 82
FS S+ +QS H I TV ++T S + H L R L+ + ++
Sbjct: 25 FSHPFSSSTDNQSLHQNIETVFRIITTSSSSTDMKHSLESSRVFLSNELIDGVLKRVRFS 84
Query: 83 -NNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKL 141
NP AL FF++T + H+ S T+++IL R+R DV+ L DP L
Sbjct: 85 HGNPLQALEFFNYTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVL---LDVKFKDPSL 141
Query: 142 -KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
L V+V V + K C + V+ R V+ N
Sbjct: 142 ISLRTVMV-----------VLGRIAKVC-------SVRQTVESFRKFKKFVPEFDVTCFN 183
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
AL+ + + K ++ +Y GL S RPN+ TFN L+ G+
Sbjct: 184 ALLRTLCQEKSMMDARNVYH---GLKS--------------MFRPNLQTFNILLSGW--- 223
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
+ E+ E + EM +G +PD SY+ L+ V+C+ R M +A K+ +MRD+++ DV+ Y
Sbjct: 224 KSSEEAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITY 283
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
+IIGG +G+ +A +EM G + + +C A + A + ++M
Sbjct: 284 TSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVN 343
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKA-----RVVKFGLFPTEKSYMFLIKGLCE 435
KG P +T + R F + D+ A R++ G P +S +FL++ +
Sbjct: 344 KGLSPNATTYNLFF------RIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKK 397
Query: 436 EGKMEEALKVQAEMVGKGF 454
K E AL++ +M+ KGF
Sbjct: 398 YEKEEMALELWNDMIQKGF 416
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 5/208 (2%)
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
E D ++ L+ C+E+ M +A ++ ++ ++ +N ++ G+ E AE
Sbjct: 176 EFDVTCFNALLRTLCQEKSMMDARNVYHGLKSM-FRPNLQTFNILLSGWKSSEE---AEG 231
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
FF EM GV+ V++ LV+ YC+ ++D A V M + + T +IG L
Sbjct: 232 FFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGGLG 291
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ +A +ILK + ++G +P +Y I+ C ++ EA + EMV KG P+
Sbjct: 292 LVGQPDKARNILK-EMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNA 350
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFE 486
Y+ F + +++ A L + M +
Sbjct: 351 TTYNLFFRIFFWSNDLQSAWNLYRRMMD 378
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 52/116 (44%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN T+N F+ + +++ M GC P+ S L+ +F + + A
Sbjct: 346 LSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEEMAL 405
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+LW +M K ++ + C++G++ AE F +M G + S +F+ +
Sbjct: 406 ELWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSYTSFKRI 461
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 196/437 (44%), Gaps = 53/437 (12%)
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF 144
P LA++FF + + KH + SY ++ IL ++ V + L S + P L F
Sbjct: 7 PDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCS-PNLVTF 65
Query: 145 EVLVKTYRECGSAP------------------FVFDLLIKCCLEVKNIEKIETCVDIVRM 186
++L++ + G A ++F+ LI + N ++ V +
Sbjct: 66 KILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQ---AVKLFEN 122
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+ S ++ + T N +I + + + E+ E+ ++R + P+
Sbjct: 123 MESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEM--------------IRRGGKSAPD 168
Query: 247 VHTFNALM-VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+ T+N L+ G ++G E+ ++ M G PD +Y+ ++ C R+ EA ++
Sbjct: 169 IVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEIL 228
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M + D+V +NT++ GFC+ G + RA E EM + +T+ LVNG CR
Sbjct: 229 KTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRV 285
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK--------ARVVKF 417
G V A + ++ R+G+ P+ L+ LC + EA ++K A +V
Sbjct: 286 GQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSI 345
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ P +Y ++ GL ++G + +A+ + +++V +G+ P + Y+ IDG K V A
Sbjct: 346 NMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREA 405
Query: 478 TMLRKEM-----FENQV 489
L EM F N V
Sbjct: 406 CDLADEMASLGCFPNDV 422
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 184/420 (43%), Gaps = 50/420 (11%)
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALR-SPENDPKLK 142
NP A++ F S + +Y T+I L ++ + AR+++ +R ++ P +
Sbjct: 112 NPDQAVKLFE-NMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIV 170
Query: 143 LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
+ L+ C + +E ++I+ + G + V T N++
Sbjct: 171 TYNTLINA---------------GICKD----GDVEEALEILDGMKLAGPAPDVITYNSI 211
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
I + V+ EI + + P++ TFN L+ GF + G
Sbjct: 212 IHALCVAGRVVEAAEILK-------------------TMSCSPDLVTFNTLLDGFCKAGM 252
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
+ +V EM R PD +Y++L+ C +++ A L EE+ + DV+AY +
Sbjct: 253 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTS 312
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSV---------TFEHLVNGYCRAGDVDSAIL 373
++ G C+ GE+ A + +EM + + V T+ ++ G + G + A+
Sbjct: 313 LVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVS 372
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ +D+ +G+ P+ T LI LC RV EA D L + G FP + + ++ GL
Sbjct: 373 LISDLVARGYVPDVVTYNTLIDGLCKANRVREACD-LADEMASLGCFPNDVTLGSVVFGL 431
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
C G++++A + EM K P++ +Y++ IDG K ++ A ++ M V +D
Sbjct: 432 CRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDD 491
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 129/282 (45%), Gaps = 34/282 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ TF L+ G + G + + + PD Y ++ L+ ++ +A KL
Sbjct: 60 PNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKL 119
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS--VTFEHLVN-G 361
+E M V D+ YNT+I G C+ G + +A E EM G +S+ VT+ L+N G
Sbjct: 120 FENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAG 179
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA-----RVVK 416
C+ GDV+ A+ + + M G P+ T +I LC RV EA +ILK +V
Sbjct: 180 ICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLVT 239
Query: 417 FG--------------------------LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
F + P +Y L+ GLC G+++ A + E+V
Sbjct: 240 FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIV 299
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+G+ P + Y++ +DG K G +E A L KEM ++ E
Sbjct: 300 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAE 341
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 186/484 (38%), Gaps = 89/484 (18%)
Query: 4 QILKHIIFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLS 63
L H +F P +L SS P ++N TV+S L + + LL
Sbjct: 101 NFLIHGLFKDGNPDQAVKLFENME-SSRVNPDIFTYN---TVISGLCKSGNLEKARELLE 156
Query: 64 LCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGP 123
I G K+ P + ++ + +CK A + IL +L GP
Sbjct: 157 -----------EMIRRGGKSAPDIVT--YNTLINAGICKDGDVEEA--LEILDGMKLAGP 201
Query: 124 ARDVI-------------RVA-----LRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLI 165
A DVI RV L++ P L F L+ + + G P ++L
Sbjct: 202 APDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLE 261
Query: 166 KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGL 225
+ C E + + T +V L G +V L+ E+ R +G I
Sbjct: 262 EMCRE-NILPDVITYTILVNGLCRVG---QVQVAFYLLEEIVR-QGYI------------ 304
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE---------DVWVEMARL 276
P+V + +L+ G + G E+ ++ EM +
Sbjct: 305 -------------------PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSI 345
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
P ++Y++++ ++ + +A L ++ + DVV YNT+I G C+ + A
Sbjct: 346 NMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREA 405
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ EM G + VT +V G CR G VD A + +M RK P LI
Sbjct: 406 CDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDG 465
Query: 397 LCDKRRVFEA---LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
LC R+ +A LD ++ + V F K + +I G G++ EA+ + EMV +G
Sbjct: 466 LCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHG----GRVAEAMAMYDEMVARG 521
Query: 454 FEPS 457
F P
Sbjct: 522 FLPD 525
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N L+ G + + D+ EMA LGC P+ + ++ C R+ +A L
Sbjct: 384 PDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSL 443
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM K +VV Y ++I G C+ M A M GV + L+
Sbjct: 444 VVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIH 503
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
G V A+ +Y++M +GF P+GST + L
Sbjct: 504 GGRVAEAMAMYDEMVARGFLPDGSTSKTL 532
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 156/356 (43%), Gaps = 24/356 (6%)
Query: 152 RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
R C P ++ + ++ V ++R L RG ++ V CN ++ V
Sbjct: 140 RGCAPTPPMYHVTLEAACRASGFRGA---VGVLRDLHGRGCALDVGNCNLVLQAVCDQGP 196
Query: 212 VISGYEIYREV---FGLDSDATA--------------GIGKDVKR---VVRVRPNVHTFN 251
V + R++ FG + D + G +D+ PN+ TF+
Sbjct: 197 VDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFS 256
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
L+ R G FE+V +V +MA GC PD Y+ ++ C+E R+ A + M
Sbjct: 257 TLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSY 316
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
+ +VV YNT++ G C AE EM VTF LV+ C+ G VD
Sbjct: 317 GLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRV 376
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
I V M G P+ T +I C + + EA+ +L++ + G P SY ++K
Sbjct: 377 IEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRS-MAACGCRPNTVSYTIVLK 435
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
GLC + +A ++ ++M+ +G P+ ++ I+ K+G VE A L K+M N
Sbjct: 436 GLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 491
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 188/429 (43%), Gaps = 58/429 (13%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIR--VALRSPENDPKLKLFEVLV---------- 148
C+ + SY ++ L AR G +D++ VA P P + F L+
Sbjct: 213 CEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCP---PNIVTFSTLIGHLCRNGLFE 269
Query: 149 ------KTYRECGSAPFV---FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC 199
E G AP V ++ C E E++E I+ + S GLS V
Sbjct: 270 RVHEVHAQMAEHGCAPDVRMYATIIDGVCKE----ERLEVARGILNRMPSYGLSPNVVCY 325
Query: 200 NALI--------WEVSRGKGVISGYEIYREVFGLDSDATAGIGKD-------VKRVVRV- 243
N L+ WE +G+++ E++ + LD D T I D V RV+ V
Sbjct: 326 NTLLKGLCSADRWE--EAEGLLA--EMFDKDCPLD-DVTFNILVDFLCQNGLVDRVIEVL 380
Query: 244 --------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
P+V T+ ++ GF +EG ++ + MA GC P+ SY++++ C
Sbjct: 381 EQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSA 440
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R +AE+L +M + + V +NT+I C+ G + +A E ++M ++G +++
Sbjct: 441 ERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 500
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++G +AG+ D A+ + N M +KG P + L + R+ + + + + +
Sbjct: 501 STVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFE-NIQ 559
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ Y +I LC+ G+ + A++ A MV G P+ Y+ I G EG V+
Sbjct: 560 DTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVK 619
Query: 476 MATMLRKEM 484
A + E+
Sbjct: 620 EAQEILTEL 628
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 107/254 (42%), Gaps = 2/254 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V PN +T+ L+ G V +MAR GC P Y V + C R
Sbjct: 105 VPVAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRG 164
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS-GVESSSVTFEHLV 359
A + ++ + DV N ++ C+ G + A R++ S G E V++ ++
Sbjct: 165 AVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVL 224
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
G C A + +M G P T LIG LC + +FE + + A++ + G
Sbjct: 225 RGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLC-RNGLFERVHEVHAQMAEHGC 283
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P + Y +I G+C+E ++E A + M G P++ Y+ + G E A
Sbjct: 284 APDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEG 343
Query: 480 LRKEMFENQVRQED 493
L EMF+ +D
Sbjct: 344 LLAEMFDKDCPLDD 357
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ +++ ++ G + G ++ ++ M + G P+ YS + + E R+ + ++
Sbjct: 495 PDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQM 554
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E ++D V D V YN +I C+ GE RA EF M SG + T+ L+ G
Sbjct: 555 FENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLAS 614
Query: 365 AGDVDSAILVYNDMCRKG 382
G V A + ++C KG
Sbjct: 615 EGFVKEAQEILTELCSKG 632
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+ ++A +C R + V + Y ++ C G +A A +M
Sbjct: 82 YNAMVAGYC---RAGQLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G + + + CRA A+ V D+ +G + +++ +CD+ V
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
EA+ +L+ + FG P SY +++GLC + + EMV G P++ +S
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258
Query: 465 IDGYMKEGNVEMATMLRKEMFEN 487
I + G E + +M E+
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEH 281
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 130/274 (47%), Gaps = 34/274 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN HT++ LM GF+++G + ++ M R G P+ Y+Y+ L++ +C + +A K+
Sbjct: 226 PNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKV 285
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EMR+K + V+ YN +IGG C + A + ++ G+ + VT+ L+NG+C
Sbjct: 286 FAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCD 345
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK------------- 411
G +D+A+ ++N + G P T LI + ALD++K
Sbjct: 346 VGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVT 405
Query: 412 --------ARVV-------------KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
AR+ K GL P +Y LI GLC G M+EA K+ +
Sbjct: 406 YTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLG 465
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+P+ IY+ I GY KEG+ A L EM
Sbjct: 466 EMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEM 499
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 124/277 (44%), Gaps = 37/277 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P +TFN LM R F+K ++ E+ + D YS+ +++ CE + +L
Sbjct: 122 PLSNTFNNLMCLLIRSNYFDKAWWIFNEL-KSKVVLDAYSFGIMIKGCCEAGYFVKGFRL 180
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG--- 361
+ + + +VV Y T+I G C+ G + A+ F +M G+ + T+ L+NG
Sbjct: 181 LAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFK 240
Query: 362 --------------------------------YCRAGDVDSAILVYNDMCRKGFEPEGST 389
YC G VD A V+ +M KG T
Sbjct: 241 QGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMT 300
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
+LIG LC ++ EA+ ++ +V K GL P +Y LI G C+ GKM+ A+++ ++
Sbjct: 301 YNILIGGLCRGKKFGEAVKLVH-KVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQL 359
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
G P+L Y+ I GY K N+ A L KEM E
Sbjct: 360 KSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 138/291 (47%), Gaps = 17/291 (5%)
Query: 200 NALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYR 259
N LI E G V ++++ E+ R + V T+N L+ G R
Sbjct: 267 NCLISEYCNGGMVDKAFKVFAEM----------------REKGIACGVMTYNILIGGLCR 310
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
F + + ++ ++G P+ +Y++L+ FC+ +M A +L+ +++ + +V
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVT 370
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YNT+I G+ ++ +A A + +EM + S VT+ L++ + R + A +++ M
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLME 430
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+ G P+ T VLI LC + EA + K+ + + L P Y +I G C+EG
Sbjct: 431 KSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKS-LGEMHLQPNSVIYNTMIHGYCKEGSS 489
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
AL++ EMV G P++ + + I ++ + A +L +M + ++
Sbjct: 490 YRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLK 540
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 17/272 (6%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
+G++ V T N LI + RGK ++ +V V + PN+ T
Sbjct: 292 KGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV----------------NKVGLSPNIVT 335
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N L+ GF G + ++ ++ G P +Y+ L+A + + + A L +EM
Sbjct: 336 YNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEME 395
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
++ + V Y +I F + +A E M SG+ T+ L++G C G++
Sbjct: 396 ERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMK 455
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A ++ + +P +I C + + AL +L +V G+ P S+
Sbjct: 456 EASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLN-EMVHSGMVPNVASFCST 514
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
I LC + K +EA + +M+ G +PS+ +Y
Sbjct: 515 IGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 147 LVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
LV + G +P + +++LI +V K++T V + L S GLS + T N LI
Sbjct: 320 LVHKVNKVGLSPNIVTYNILINGFCDVG---KMDTAVRLFNQLKSSGLSPTLVTYNTLIA 376
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
S+ + + ++ +E+ +R + P+ T+ L+ F R E
Sbjct: 377 GYSKVENLAGALDLVKEM--------------EERCIA--PSKVTYTILIDAFARLNYTE 420
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
K ++ M + G PD Y+YSVL+ C M+EA KL++ + + +++ + V YNT+I
Sbjct: 421 KACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMI 480
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G+C+ G RA EM SG+ + +F + CR A L+ M G +
Sbjct: 481 HGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLK 540
Query: 385 PEGS 388
P S
Sbjct: 541 PSVS 544
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 12/174 (6%)
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
Y+TI+ + +A F M G S TF +L+ R+ D A ++N++
Sbjct: 92 YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL- 150
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+ + + ++I C+ + +L A + +FGL P Y LI G C+ G +
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLL-AMLEEFGLSPNVVIYTTLIDGCCKYGNV 209
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE---MFENQVR 490
A + +M G P+ YS ++G+ K+G L++E M+EN R
Sbjct: 210 MLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQG-------LQREGFQMYENMKR 256
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 138/259 (53%), Gaps = 1/259 (0%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
D+ + + + ++ V R++PNV ++A++ G +++G ++++ EM G P+ ++Y
Sbjct: 227 DTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTY 286
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ ++ FC R EA++L EM ++ + DVV ++ +I + G+ AEE + EM
Sbjct: 287 NCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLP 346
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G+ +++T+ +++G+ + +D+A ++ M KG P+ T +LI C +RV +
Sbjct: 347 RGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDD 406
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+ +L + + GL +Y LI G C+ G + AL + EM+ G P++ + +
Sbjct: 407 GMKLLH-EMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLL 465
Query: 466 DGYMKEGNVEMATMLRKEM 484
DG G ++ A + K M
Sbjct: 466 DGLCNNGKLKDALEMFKVM 484
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 147/303 (48%), Gaps = 28/303 (9%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
++R + R +S V T + LI + + E+Y E+
Sbjct: 305 LLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRG---------------- 348
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN T+N+++ GF ++ + E ++ MA GC PD ++S+L+ +C +R+ +
Sbjct: 349 IIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGM 408
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL EM + + + + Y T+I GFC++G + A + +EM SGV + VT L++G
Sbjct: 409 KLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGL 468
Query: 363 CRAGDVDSAILVYNDMCR-----------KGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
C G + A+ ++ M + EP+ T +LI L ++ + EA + L
Sbjct: 469 CNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEE-LY 527
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ GL P +Y +I GLC++ +++EA ++ M KGF P + ++ I+GY K
Sbjct: 528 EEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKV 587
Query: 472 GNV 474
G V
Sbjct: 588 GRV 590
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 127/237 (53%), Gaps = 9/237 (3%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR--EVFGLDSDATAGI 233
+ +D+++ ++S G+ V TCN L+ + + E+++ + +D DA+
Sbjct: 438 NLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPF 497
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
V P+V T+N L+ G EG F + E+++ EM G PD +Y+ ++ C
Sbjct: 498 ND-------VEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLC 550
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
++ R+ EA ++++ M K DVV + T+I G+C++G + E F EMG G+ ++++
Sbjct: 551 KQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAI 610
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
T+ L++G+C+ G+++ A+ ++ +M G P+ TI ++ L K + A+ L
Sbjct: 611 TYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 133/253 (52%), Gaps = 10/253 (3%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V TF+ L+ +EG F + E+++ EM G P+ +Y+ ++ F ++ R+ A
Sbjct: 313 KMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAA 372
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
E+++ M K DV+ ++ +I G+C + + EM G+ ++++T+ L++G
Sbjct: 373 ERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHG 432
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA-RVVKFGLF 420
+C+ G++++A+ + +M G P T L+ LC+ ++ +AL++ K + K L
Sbjct: 433 FCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLD 492
Query: 421 ---------PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
P ++Y LI GL EGK EA ++ EM +G P Y++ IDG K+
Sbjct: 493 ASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQ 552
Query: 472 GNVEMATMLRKEM 484
++ AT + M
Sbjct: 553 SRLDEATQMFDSM 565
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 12/213 (5%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL-----------GCEPDCYSYSVLMAV 291
V PNV T N L+ G G + +++ M + EPD +Y++L+
Sbjct: 454 VCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICG 513
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
E + EAE+L+EEM + + D + YN++I G C+ + A + F MG G
Sbjct: 514 LINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPD 573
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
VTF L+NGYC+ G V + V+ +M R+G T LI C + ALDI +
Sbjct: 574 VVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQ 633
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
++ G++P + ++ GL + +++ A++
Sbjct: 634 -EMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 12/222 (5%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+ L+ GF + G D+ EM G P+ + + L+ C ++++A +++
Sbjct: 422 NTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMF 481
Query: 306 EEMRD-----------KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ M+ +VE DV YN +I G G+ + AEE + EM G+ ++T
Sbjct: 482 KVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTIT 541
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ +++G C+ +D A +++ M KGF P+ T LI C RV + L++ +
Sbjct: 542 YNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVF-CEM 600
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+ G+ +Y LI G C+ G + AL + EM+ G P
Sbjct: 601 GRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYP 642
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 108/222 (48%), Gaps = 6/222 (2%)
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
+EM R+ C + YS+++L+ FC ++ A + ++ +V ++T++ G C
Sbjct: 102 MEMRRIPC--NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVE 159
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
++ A FF ++ + + + F L+NG CR G V A+ + + M G +P T
Sbjct: 160 DRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITY 215
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
++ +C AL++L+ + P Y +I GL ++G+ +A + +EM
Sbjct: 216 GTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQ 275
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
KG P+L Y+ I+G+ G A L +EMFE ++ +
Sbjct: 276 EKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPD 317
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 110/239 (46%), Gaps = 8/239 (3%)
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L GF+ + D++ M R P + L+ V R L +M +
Sbjct: 47 LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ ++ ++ +I FC ++ A F ++ G S VTF L++G C V A+
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
++ +C+ P L+ LC + RV EA+ +L R+V+ GL P + +Y ++ G
Sbjct: 167 HFFHQICK----PNVIAFTTLMNGLCREGRVVEAVALLD-RMVEDGLQPNQITYGTIVDG 221
Query: 433 LCEEGKMEEALKVQAEM--VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+C+ G AL + +M V + +P++ IYSA IDG K+G A L EM E +
Sbjct: 222 MCKMGDTVSALNLLRKMEEVSR-IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGI 279
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 152/308 (49%), Gaps = 17/308 (5%)
Query: 179 TCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK 238
+ ++I+ ++ S S T N LI RGK + A + + K ++
Sbjct: 397 SALEILSLMESNNCSPNARTYNELILGFCRGKNI--------------HKAMSLLHKMLE 442
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
R +++PNV T+N L+ G +EG + M G PD ++YSV + C+ +
Sbjct: 443 R--KLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLV 500
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EA L+E +++K ++ + V Y+T+I G+C++G+++ +M +G +S+T+ L
Sbjct: 501 EEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSL 560
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++GYC+ + A L+ + M ++ EP T +LI L +A D+ +++ G
Sbjct: 561 IDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFD-QMLSTG 619
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
P Y I C G++++A + +M KG P +Y+ FID Y + G+++ A
Sbjct: 620 SHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAF 679
Query: 479 MLRKEMFE 486
+ K M E
Sbjct: 680 GILKRMHE 687
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 216/475 (45%), Gaps = 39/475 (8%)
Query: 25 QFSTSSSTPPSDQS--HNLIATVVSLLTHHRSKSRWNHLLSLCR--SGLTPTQFSQIALG 80
+F TS ++ P S H++ A + S+L S+ W SL + P+ S +
Sbjct: 31 RFFTSPASLPQSFSVEHDIPAQLFSIL----SRPNWQKHPSLKNLIPSIAPSHISAL-FA 85
Query: 81 LKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN-DP 139
L +P AL FF++ K KH++ S+ ++++IL + A ++ + ++S ++ +
Sbjct: 86 LNLDPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSEN 145
Query: 140 KLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGL------S 193
L + E+L R + F F L ++C +++ ML+SR L S
Sbjct: 146 ALFVLEMLRSMNRRVDA--FKFKLTLRC-------------YNMLLMLLSRFLMIDEMKS 190
Query: 194 VKVSTCNALIW-EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNA 252
V + + ++ + +++GY V +A + K V+ + + + T+ +
Sbjct: 191 VYLEMLDDMVTPNIFTLNTMVNGYCKLGNVV----EAELYVSKIVQAGLSL--DTFTYTS 244
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L++G+ R + +++ M GC + SY+ L+ FCE RR+ EA KL+ +M + N
Sbjct: 245 LILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDN 304
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
V Y II C++G A F+EM + + T+ L+ C + D A
Sbjct: 305 CWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAK 364
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+ N M KG P T LI C K AL+IL + + P ++Y LI G
Sbjct: 365 KILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEIL-SLMESNNCSPNARTYNELILG 423
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
C + +A+ + +M+ + +P++ Y+ I G KEG++ A L M E+
Sbjct: 424 FCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNES 478
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 117/246 (47%), Gaps = 1/246 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNVHT+ L+ + F+ + + M G P +Y+ L+ +C++ A +
Sbjct: 341 QPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALE 400
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ M N + YN +I GFC + +A +M ++ + VT+ L++G C
Sbjct: 401 ILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQC 460
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ GD+ SA + + M G P+ T V I LC + V EA + ++ K G+ E
Sbjct: 461 KEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEK-GIKANE 519
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
Y LI G C+ GK+ + + +M+ G P+ Y++ IDGY KE N + A +L
Sbjct: 520 VIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDI 579
Query: 484 MFENQV 489
M + +
Sbjct: 580 MIKRDI 585
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 107/505 (21%), Positives = 193/505 (38%), Gaps = 67/505 (13%)
Query: 9 IIFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSG 68
IIF++ + K + L+ F + H + SL L + G
Sbjct: 315 IIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKG 374
Query: 69 LTPTQFSQIAL-------GLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLI 121
L P+ + AL GL + AL S + + C + +Y +I R + I
Sbjct: 375 LIPSVVTYNALIDGYCKKGLSAS---ALEILSLMESNN-CSPNARTYNELILGFCRGKNI 430
Query: 122 GPARDVIRVALRSPENDPKLKLFEVLVKTYREC-----GSAPFVFDLLIKCCLEVKNIEK 176
A ++ L + P + + +L+ + +C GSA + L+ + L +
Sbjct: 431 HKAMSLLHKMLER-KLQPNVVTYNILI--HGQCKEGDLGSAYKLLSLMNESGL----VPD 483
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK- 235
T + L RGL + + ++E + KG+ + IY + D +GK
Sbjct: 484 EWTYSVFIDTLCKRGLVEEARS----LFESLKEKGIKANEVIYSTLI----DGYCKVGKV 535
Query: 236 -------DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
D PN T+N+L+ G+ +E F++ + M + EP +Y++L
Sbjct: 536 SDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTIL 595
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ ++ +A ++++M DV Y I +C G + AE +M G+
Sbjct: 596 IDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGI 655
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL----------- 397
++ + ++ Y R G +D A + M G EP T LI L
Sbjct: 656 MPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSS 715
Query: 398 -----------------CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
C +R +E L ++ + G P +Y I GLC+ G +E
Sbjct: 716 SELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLE 775
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFI 465
A ++ M KG P+ +IY++ +
Sbjct: 776 VAHRLFDHMKEKGQSPNEDIYNSLL 800
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 108/294 (36%), Gaps = 65/294 (22%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P T+ L+ ++ F++ D++ +M G PD + Y+ + +C R+++AE
Sbjct: 585 IEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAE 644
Query: 303 KLWEEMRDKNVEHDVVAYN----------TIIGGF-------------------CEIGEM 333
L +M K + D + Y +I G F C I +
Sbjct: 645 VLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL 704
Query: 334 ARAE-----------------------------------EFFREMGLSGVESSSVTFEHL 358
+ A+ + F +M G ++ T+
Sbjct: 705 SNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKF 764
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+ G C+ G ++ A +++ M KG P L+G C EA+ L +
Sbjct: 765 ITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRH 824
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
L P S L+ GL +EG E+A +V + + ++ IDG +K+G
Sbjct: 825 L-PHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKG 877
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 133/244 (54%), Gaps = 9/244 (3%)
Query: 235 KDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
K KR++ ++P++ T++ALMV R G K+ ++ EM +G P+ Y+Y++ +
Sbjct: 221 KVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRAL 280
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
RR+ +A +++EM D+ DV+ Y +I C G++ +A+E + +M S
Sbjct: 281 GRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDR 340
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDI 409
VT+ L++ + + GD+++ +N+M G+ P+ T +LI LC D R F+ LD+
Sbjct: 341 VTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDV 400
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
+ + G+FP +Y +I GL + +++EAL++ M G +P+ Y FID Y
Sbjct: 401 MTTK----GIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYG 456
Query: 470 KEGN 473
K G+
Sbjct: 457 KSGD 460
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 124/242 (51%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN T+N L+ + K+ D++ EM GCEP+ +++++++ + + +A
Sbjct: 827 THPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKAL 886
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ E+ + Y +I G + G +A + F EM G +SV + L+NG+
Sbjct: 887 DLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGF 946
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
++G++D A ++ M ++G P+ + +L+ LC R+ EA+ + + GL P
Sbjct: 947 GKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLT-GLDPD 1005
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY F+I GL + +++EAL + +EM +G P L Y+A I G V++A + +
Sbjct: 1006 TVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYE 1065
Query: 483 EM 484
E+
Sbjct: 1066 EL 1067
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 119/242 (49%), Gaps = 1/242 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
DV + PN+HT+N ++ G + ++ ++ M LG +P +SY + + + +
Sbjct: 399 DVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKS 458
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+A +E M+ + + + A N + E G ++ AE+ F ++ G+ SVT+
Sbjct: 459 GDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTY 518
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+ Y +AG +D A + ++M KG EP+ I LI L RV A + R+
Sbjct: 519 NMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMF-GRLK 577
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
L PT +Y L+ GL +EGK+ +AL++ M G P+ +++ +D K V+
Sbjct: 578 NLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVD 637
Query: 476 MA 477
+A
Sbjct: 638 LA 639
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 173/392 (44%), Gaps = 46/392 (11%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALR--SPENDPKLKLFEVLVKTYRECGSAPFVFDLL 164
SY +IH+L L G + ++V R S P +K + L+ G + +LL
Sbjct: 203 SYNGLIHLL----LPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLL 258
Query: 165 IKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV-- 222
E+K+I GL + T I + R + + + I++E+
Sbjct: 259 ----EEMKSI----------------GLRPNIYTYTICIRALGRARRIDDAWGIFKEMDD 298
Query: 223 ---------FGLDSDATAGIGKDVKR---VVRVRPNVH-----TFNALMVGFYREGAFEK 265
+ + DA GK K V++R + H T+ LM F + G E
Sbjct: 299 EGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLET 358
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
V+ W EM G PD +Y++L+ C+ + A + + M K + ++ YNT+I
Sbjct: 359 VKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMIC 418
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
G + + A E M GV+ ++ ++ ++ Y ++GD AI + M ++G P
Sbjct: 419 GLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMP 478
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+ + L + R+ EA DI + K GL P +Y L+K + G++++A ++
Sbjct: 479 SIAACNASLYTLAETGRISEAEDIFN-DLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQL 537
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+EM+ KG EP + I ++ I+ K G V+ A
Sbjct: 538 LSEMISKGCEPDVMIINSLINTLYKAGRVDAA 569
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 142/316 (44%), Gaps = 23/316 (7%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAGIGKDVK 238
+D + RG+ ++ CNA ++ ++ + +I+ ++ GL D+
Sbjct: 465 IDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSV-------- 516
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
T+N LM + + G +K + EM GCEPD + L+ + R+
Sbjct: 517 ----------TYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRV 566
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
A K++ +++ + VV YN ++ G + G++ +A E F M SG +++TF L
Sbjct: 567 DAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSL 626
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++ + VD A+ ++ M P+ T +I L + R+ A ++ KF
Sbjct: 627 LDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFH-QMKKF- 684
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG-FEPSLEIYSAFIDGYMKEGNVEMA 477
L P + LI G+ G++E+A+KV E V + + + + + ++ + E +E A
Sbjct: 685 LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEA 744
Query: 478 TMLRKEMFENQVRQED 493
+ + N V Q+D
Sbjct: 745 ISFAEILVCNSVCQDD 760
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 109/206 (52%), Gaps = 2/206 (0%)
Query: 288 LMAVFCEERRMREAEKLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L+ V C+ ++ +A+ ++++ ++ + + +YN ++ G +A E F +M +
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G ++ T+ L++ + ++ ++ +Y++M +G EP T ++I L + +A
Sbjct: 826 GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
LD L ++ PT +Y LI GL + G+ E+A+K+ EM+ G P+ IY+ I+
Sbjct: 886 LD-LYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILIN 944
Query: 467 GYMKEGNVEMATMLRKEMFENQVRQE 492
G+ K G ++ A L K+M + +R +
Sbjct: 945 GFGKSGEIDFACELFKKMVKEGIRPD 970
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 148/365 (40%), Gaps = 64/365 (17%)
Query: 132 LRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMS 189
L S + L+LFE + + G+ P F ++LL+ + K I K+ D+ + S
Sbjct: 807 LGSNFTEKALELFEDM----KSAGTHPNNFTYNLLLDAHGKSKRINKL---YDLYSEMRS 859
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDAT-------------AGIGKD 236
RG T N +I + + + ++Y E+ D T AG +
Sbjct: 860 RGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQ 919
Query: 237 VKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
++ PN +N L+ GF + G + +++ +M + G PD SY++L+
Sbjct: 920 AMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVE 979
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C R+ EA + +EE++ ++ D V+YN II G + + A F EM G+
Sbjct: 980 CLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISP 1039
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
T+ L+ AG VD A+ +Y ++ G EP VF
Sbjct: 1040 DLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPS----------------VF------ 1077
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+Y LI+G G ++A V +M+ G P+ E ++ + Y +
Sbjct: 1078 --------------TYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPR 1123
Query: 471 EGNVE 475
G V
Sbjct: 1124 AGLVH 1128
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 132/243 (54%), Gaps = 2/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV ++N ++ GF + E + +M GC PD SY+ ++ C+ ++ EA ++
Sbjct: 77 PNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRV 136
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M + + +V+ Y T++ GFC +G++ A E R+M G +++T+ ++++G C
Sbjct: 137 MDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCS 196
Query: 365 AGDVDSAILVYNDMCRKG-FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+DSA+ ++ +M G P+ T ++ L +V +A +++A V K G P
Sbjct: 197 GRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSK-GCSPNV 255
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ GLC+ GK++EA + M G P++ Y+ IDG+ K G ++ A L +E
Sbjct: 256 VTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEE 315
Query: 484 MFE 486
M +
Sbjct: 316 MVD 318
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 187/428 (43%), Gaps = 48/428 (11%)
Query: 74 FSQIALGLKNNPHL--ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRV- 130
++ I GL + L AL+ F + C + +Y+TI+ L ++ G D R+
Sbjct: 187 YNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKS---GKVDDACRLV 243
Query: 131 -ALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMS 189
A+ S P + + L+ + G K++ +++ +
Sbjct: 244 EAMVSKGCSPNVVTYSSLLHGLCKAG--------------------KLDEATALLQRMTR 283
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG-------------LDSDATAGIGKD 236
G S + T N +I + + Y + E+ LD+ G +D
Sbjct: 284 SGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAED 343
Query: 237 VKRVVRVR------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
+V V PN+ T+N+L+ F ++ E+ + M + GC P+ SY+ ++A
Sbjct: 344 AIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIA 403
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C+ ++ E L E+M N D+V +NTII C+ + A E F + SG
Sbjct: 404 GLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTP 463
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRK-GFEPEGSTIEVLIGELCDKRRVFEALDI 409
+ VT+ LV+G C++ D A + +M RK G P+ T +I LC +RV A +
Sbjct: 464 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 523
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
+++ GL P + +Y +I LC+ M+EA V M+ GF+P Y IDG+
Sbjct: 524 F-LQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFC 582
Query: 470 KEGNVEMA 477
K GN++ A
Sbjct: 583 KTGNLDKA 590
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 123/240 (51%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N ++ G + + + EM G P+ +SY+ ++ FC+ R+ A L
Sbjct: 42 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 101
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+M + DVV+Y T+I G C++ ++ A +M G + + +T+ LV+G+CR
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 161
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GD+D A+ + M +G+ P T ++ LC R++ AL + K P
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF 221
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y ++ L + GK+++A ++ MV KG P++ YS+ + G K G ++ AT L + M
Sbjct: 222 TYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 281
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 138/304 (45%), Gaps = 16/304 (5%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ ++ V++VR + RG T N ++ + G+ + S ++++E+
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEM----------- 210
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
+ P+V T++ ++ + G + + M GC P+ +YS L+ C
Sbjct: 211 ----EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLC 266
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ ++ EA L + M ++V YNTII G C++G + A EM G + + V
Sbjct: 267 KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 326
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ L++ +C+ G + AI + M KG+ P T L+ C K V A +L +
Sbjct: 327 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 386
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+ K G P SY +I GLC+ K+ E + + +M+ P + ++ ID K
Sbjct: 387 IQK-GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 445
Query: 474 VEMA 477
V++A
Sbjct: 446 VDIA 449
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 122/244 (50%), Gaps = 2/244 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNV T+ L+ GF R G + ++ +M G P+ +Y+ +M C R++ A +
Sbjct: 146 QPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQ 205
Query: 304 LWEEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++EM + + DV Y+TI+ + G++ A M G + VT+ L++G
Sbjct: 206 LFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGL 265
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+AG +D A + M R G P T +I C R+ EA +L+ +V G P
Sbjct: 266 CKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLE-EMVDGGCQPN 324
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ C+ GK E+A+ + MV KG+ P+L Y++ +D + K+ VE A L
Sbjct: 325 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 384
Query: 483 EMFE 486
M +
Sbjct: 385 SMIQ 388
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 117/222 (52%), Gaps = 2/222 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAVFCEERRMREAEK 303
PN+ T+N+L+ G + F++ E + EM R GC PD +Y+ ++ C+ +R+ A K
Sbjct: 463 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYK 522
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+ +M + D V Y+ +I C+ M A M +G + ++T+ L++G+C
Sbjct: 523 LFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFC 582
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G++D A+ + + KG P+ T + I L + R+ +A ++L+ +++ GL P
Sbjct: 583 KTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLET-MLRAGLVPDT 641
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+Y L+KG C+ + E+A+ + M G EP Y+ +
Sbjct: 642 VTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 97/183 (53%), Gaps = 2/183 (1%)
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M K ++ + +I+ G C+ G+ + A FREM + SVT+ ++NG ++
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 59
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+D AI + +M GF P + ++ C RV AL +L+ V++ G P SY
Sbjct: 60 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMR-GCPPDVVSYT 118
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+I GLC+ +++EA +V +M+ +G +P++ Y +DG+ + G+++ A L ++M E
Sbjct: 119 TVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER 178
Query: 488 QVR 490
R
Sbjct: 179 GYR 181
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 110/231 (47%), Gaps = 2/231 (0%)
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+++ R P++ T+N ++ G + ++ ++++M G PD +YS++++ C+
Sbjct: 489 REMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 548
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R M EA + E M + + Y T+I GFC+ G + +A E + + G VT
Sbjct: 549 WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVT 608
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
F ++ + G + A + M R G P+ T L+ CD R +A+D+ + +
Sbjct: 609 FSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEV-M 667
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEAL-KVQAEMVGKGFEPSLEIYSAF 464
+ G P +Y L+ L ++ ++ L +V MV GF+ + E+ S
Sbjct: 668 RQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKL 718
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%), Gaps = 2/215 (0%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M R G + + ++ C+ + +A + EM K D V YNT+I G +
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMINGLSKSDR 59
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A EM +G + ++ +++G+C+A V++A+ + M +G P+ +
Sbjct: 60 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
+I LC +V EA ++ ++++ G P +Y L+ G C G ++ A+++ +M +
Sbjct: 120 VINGLCKLDQVDEACRVMD-KMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER 178
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
G+ P+ Y+ + G ++ A L KEM E+
Sbjct: 179 GYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEES 213
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 124/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + T+NAL+ G + G E+ D+ ++ GC PD +Y+ L+ +++R EA KL
Sbjct: 67 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKL 126
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++EM + + D V Y +I G + G++ +A ++ M G VT +++G C+
Sbjct: 127 FKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCK 186
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG + +A+ ++ M +G P LI LC R++ AL++L A++ K P
Sbjct: 187 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML-AQMKKAFCTPDTI 245
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI GLC+ G + A EM+ G +P + Y+ I G+ K GN + A + +M
Sbjct: 246 TYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDM 305
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 143/309 (46%), Gaps = 17/309 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++E +D++R ++ G + V T +LI + + K Y++++E+ A+ G+
Sbjct: 84 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEM------ASRGLAL 137
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D + AL+ G + G + V+ M GC PD + S ++ C+
Sbjct: 138 DTV----------CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 187
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ A ++++ M + + + V Y+ +I G C+ +M A E +M + ++T+
Sbjct: 188 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 247
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C++GDV +A +++M G +P+ T +LI C A + +
Sbjct: 248 NILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFD-DMS 306
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
P +Y LI GLC+ ++ +A M +G P +YS+ +DG K G +E
Sbjct: 307 SSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLE 366
Query: 476 MATMLRKEM 484
ML EM
Sbjct: 367 GGCMLFDEM 375
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 115/241 (47%), Gaps = 1/241 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++HT+ ++ + ++ + ++ GC P +Y+ L+ C+ R+ EA L
Sbjct: 33 DIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 92
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++ D DVV Y ++I G + A + F+EM G+ +V + L+ G +A
Sbjct: 93 RKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQA 152
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + A VY M +G P+ T+ +I LC R+ A+ I K+ + GL P E
Sbjct: 153 GKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR-GLAPNEVV 211
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI GLC+ KM+ AL++ A+M P Y+ IDG K G+V A EM
Sbjct: 212 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEML 271
Query: 486 E 486
E
Sbjct: 272 E 272
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+V+T+N L+ GF + G + V+ +M+ C P+ +Y L++ C+ R++ +A
Sbjct: 276 KPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASL 335
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ M+++ D Y++++ G C+ G++ F EM SGV +S T L+ C
Sbjct: 336 YYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQ-TRTRLIFHLC 394
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
+A VD A+ ++N + ++G P +I L +V E
Sbjct: 395 KANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEG 436
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
++DA G+ D+ R PNV T+ L+ G + K + M GC PD + Y
Sbjct: 294 NTDAACGVFDDMSSS-RCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVY 352
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
S L+ C+ ++ L++EM V + +I C+ + A F +
Sbjct: 353 SSLVDGLCKSGKLEGGCMLFDEMERSGVANSQT-RTRLIFHLCKANRVDEAVSLFNAIRK 411
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
G+ + +++ ++G V+ VY +M
Sbjct: 412 EGMP-HPYAYNSIISALIKSGKVNEGQAVYQEM 443
>gi|270342070|gb|ACZ74655.1| hypothetical protein [Phaseolus vulgaris]
gi|270342076|gb|ACZ74661.1| hypothetical protein [Phaseolus vulgaris]
Length = 485
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 169/346 (48%), Gaps = 21/346 (6%)
Query: 143 LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
++E LV+ +C P +FD+L+K ++V +EK ++ R + L V CN L
Sbjct: 24 IYENLVRCTEDCNWNPVIFDMLVKAYVKVGMVEK---ALETFRRNIETRLIPNVIACNCL 80
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
+ +SR + +E+Y E+ L V+ N +TFN + ++G
Sbjct: 81 LSGLSRFNYITQCWEVYAEMGRLG----------------VQRNAYTFNIMTHVLSKDGD 124
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
+KV +M G EPD +Y+ L+ +C++RR+ +A L++ M + V +++ Y T
Sbjct: 125 TDKVTGFLEKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYVRGVMPNLITYTT 184
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
++ G CE G++ A + F +M G+ V++ LV GYCR G++ + +M
Sbjct: 185 LMNGLCEEGKVKEAHQLFHQMVHRGIAPDIVSYNTLVCGYCRHGEMQMCRSILYEMIGNR 244
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
P+ T V++ ++ AL+ ++ + +F + E+ Y +L+ LC+EGK A
Sbjct: 245 ICPDSITCRVIVDGYARDGKLLSALNTVE-ELKRFRMKIPEEVYDYLVVALCKEGKPFAA 303
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+ G+ P + Y+ ++ + N E A +L+ +M EN+
Sbjct: 304 RSFLHRISEDGYTPKMNTYNKLVESLCEFNNEEEALILKSDM-ENK 348
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 9/228 (3%)
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEER-RMREAEKLWEEMRDKNVEH----DVVAYN 321
E ++ + R C DC V+ + + ++ EK E R +N+E +V+A N
Sbjct: 22 EGIYENLVR--CTEDCNWNPVIFDMLVKAYVKVGMVEKALETFR-RNIETRLIPNVIACN 78
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
++ G + + E + EMG GV+ ++ TF + + + GD D M +
Sbjct: 79 CLLSGLSRFNYITQCWEVYAEMGRLGVQRNAYTFNIMTHVLSKDGDTDKVTGFLEKMEEE 138
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
GFEP+ T L+ C KRR+ +A + K V+ G+ P +Y L+ GLCEEGK++E
Sbjct: 139 GFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYVR-GVMPNLITYTTLMNGLCEEGKVKE 197
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
A ++ +MV +G P + Y+ + GY + G ++M + EM N++
Sbjct: 198 AHQLFHQMVHRGIAPDIVSYNTLVCGYCRHGEMQMCRSILYEMIGNRI 245
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 107/233 (45%), Gaps = 3/233 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ ++N L+ G+ R G + + EM PD + V++ + + ++ A
Sbjct: 210 IAPDIVSYNTLVCGYCRHGEMQMCRSILYEMIGNRICPDSITCRVIVDGYARDGKLLSAL 269
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
EE++ ++ Y+ ++ C+ G+ A F + G T+ LV
Sbjct: 270 NTVEELKRFRMKIPEEVYDYLVVALCKEGKPFAARSFLHRISEDGYTPKMNTYNKLVESL 329
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C + + A+++ +DM K + + +I LC +R EA ++L ++ + P
Sbjct: 330 CEFNNEEEALILKSDMENKSMKVNAAAYRAVIICLCRVKRTVEA-EVLLEEIIGSDMLPD 388
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP-SLEIYSAFIDGYMKEGNV 474
+ LIKG CEE K+++A+ + ++ K F+ E Y+A + + GNV
Sbjct: 389 VEISRALIKGYCEENKVDKAVSL-LKLFAKEFQVYDTESYNAVVKVFCDVGNV 440
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 93/216 (43%), Gaps = 1/216 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ P+ T ++ G+ R+G + E+ R + Y L+ C+E + A
Sbjct: 244 RICPDSITCRVIVDGYARDGKLLSALNTVEELKRFRMKIPEEVYDYLVVALCKEGKPFAA 303
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ + + YN ++ CE A +M ++ ++ + ++
Sbjct: 304 RSFLHRISEDGYTPKMNTYNKLVESLCEFNNEEEALILKSDMENKSMKVNAAAYRAVIIC 363
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
CR A ++ ++ P+ LI C++ +V +A+ +LK +F ++
Sbjct: 364 LCRVKRTVEAEVLLEEIIGSDMLPDVEISRALIKGYCEENKVDKAVSLLKLFAKEFQVYD 423
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
TE SY ++K C+ G + E ++V+ +++ G+ P+
Sbjct: 424 TE-SYNAVVKVFCDVGNVTELMEVEDKLLKVGYVPN 458
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD L+ +CEE ++ +A L + + +D +YN ++ FC++G + E
Sbjct: 387 PDVEISRALIKGYCEENKVDKAVSLLKLFAKEFQVYDTESYNAVVKVFCDVGNVTELMEV 446
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
++ G + +T H+++G +A ++D IL
Sbjct: 447 EDKLLKVGYVPNKLTCRHVIHGLQKAMELDDEIL 480
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 132/259 (50%), Gaps = 2/259 (0%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
++ A AG+ K ++ +PN+ T++ L+ R+ + D++ M G PD ++Y
Sbjct: 213 ETAAAAGLLKKMEEA-GCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTY 271
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ L+ C+ R +EA L EM N+ D+V +N ++ FC+ G+++ A + M
Sbjct: 272 TSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTE 331
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
GVE + VT+ L+ GY DV A +++ M KG +P + +LI C +R+ E
Sbjct: 332 MGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDE 391
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
A+ + ++ GL P SY LI G C+ GK+ EA + M G P L YS +
Sbjct: 392 AMQLFN-EMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILL 450
Query: 466 DGYMKEGNVEMATMLRKEM 484
DG+ K+G + A L + M
Sbjct: 451 DGFCKQGYLGKAFRLFRAM 469
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 153/301 (50%), Gaps = 17/301 (5%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+ +DI + ++G+S + T +LI + + + ++E L ++ T+
Sbjct: 249 VNEALDIFSYMKAKGISPDIFTYTSLIQGLCK-------FSRWKEASALLNEMTS----- 296
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
+ + P++ TFN L+ F +EG + V M +G EP+ +YS LM +
Sbjct: 297 ----LNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWT 352
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ EA KL+ M K + ++ +YN +I G+C+ + A + F EM G+ ++V++
Sbjct: 353 DVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYN 412
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L++G+C+ G + A ++ +MC G P+ T +L+ C + + +A + +A
Sbjct: 413 TLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQST 472
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
+ L P Y L+ +C+ G ++A K+ +E+ +G +P +++Y+ I+G KEG ++
Sbjct: 473 Y-LKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDE 531
Query: 477 A 477
A
Sbjct: 532 A 532
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 130/248 (52%), Gaps = 13/248 (5%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV T+++LM G+ + ++ M GC+P+ +SY++L+ +C+ +R+ EA
Sbjct: 334 VEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAM 393
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ EM + + + V+YNT+I GFC++G++ A++ FR M +G T+ L++G+
Sbjct: 394 QLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGF 453
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC------DKRRVFEALDILKARVVK 416
C+ G + A ++ M +P +L+ +C D R++F L +
Sbjct: 454 CKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQ------ 507
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
GL P + Y +I GLC+EG ++EAL+ M G P Y+ I G ++ +
Sbjct: 508 -GLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESR 566
Query: 477 ATMLRKEM 484
A +L EM
Sbjct: 567 ALLLVGEM 574
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 126/243 (51%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+ +L+ G + +++ + EM L PD +++VL+ FC+E ++ EA
Sbjct: 264 ISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEAL 323
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M + VE +VV Y++++ G+ ++ A + F M G + + ++ L+NGY
Sbjct: 324 GVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGY 383
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A +D A+ ++N+M +G P + LI C ++ EA D+ + G P
Sbjct: 384 CKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTN-GNLPD 442
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G C++G + +A ++ M +P+L +Y+ + K GN + A L
Sbjct: 443 LFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFS 502
Query: 483 EMF 485
E+F
Sbjct: 503 ELF 505
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 119/229 (51%), Gaps = 1/229 (0%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
+V + PN++T + M F + + V ++ +LG +P +++ L+ C+
Sbjct: 121 LVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFA 180
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A +L+++M K + DV YNTII G C+IGE A A ++M +G + + VT+ L+
Sbjct: 181 QAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLI 240
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+ CR V+ A+ +++ M KG P+ T LI LC R EA +L + +
Sbjct: 241 DSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLN-EMTSLNI 299
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
P ++ L+ C+EGK+ EAL V M G EP++ YS+ + GY
Sbjct: 300 MPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGY 348
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 125/260 (48%), Gaps = 4/260 (1%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF-EKVEDVWVEMARLGCEPDCYSYS 286
DA A + R + P + F L+ + G + + V + +M +G P+ Y+ S
Sbjct: 75 DALASFNHMLHR--KPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
+ M FC+ +R+ + ++ ++ +V + T+I G C++GE A+A E F +M
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G + T+ ++NG C+ G+ +A + M G +P T LI LC R V EA
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
LDI K G+ P +Y LI+GLC+ + +EA + EM P + ++ +D
Sbjct: 253 LDIFSYMKAK-GISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVD 311
Query: 467 GYMKEGNVEMATMLRKEMFE 486
+ KEG V A + K M E
Sbjct: 312 TFCKEGKVSEALGVLKTMTE 331
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 115/244 (47%), Gaps = 1/244 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+V+T+N ++ G + G + +M GC+P+ +YS L+ C +R + EA
Sbjct: 195 QPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALD 254
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ M+ K + D+ Y ++I G C+ A EM + VTF LV+ +C
Sbjct: 255 IFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFC 314
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G V A+ V M G EP T L+ V EA + + K G P
Sbjct: 315 KEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITK-GCKPNI 373
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
SY LI G C+ +++EA+++ EM+ +G P+ Y+ I G+ + G + A L +
Sbjct: 374 FSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRN 433
Query: 484 MFEN 487
M N
Sbjct: 434 MCTN 437
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 92/230 (40%), Gaps = 38/230 (16%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
A++ F+ H+ L +++S Y T+IH + + A+D+ R + + N P L + +L
Sbjct: 392 AMQLFNEMIHQGLTPNNVS-YNTLIHGFCQLGKLREAQDLFR-NMCTNGNLPDLFTYSIL 449
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
+ + + G F L R + S L + L+ +
Sbjct: 450 LDGFCKQGYLGKAFRLF--------------------RAMQSTYLKPNLVMYTILVHAMC 489
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
+ +++ E+F V ++P+V + ++ G +EG ++
Sbjct: 490 KSGNHKDARKLFSELF----------------VQGLQPHVQLYTTIINGLCKEGLLDEAL 533
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ + M GC PD SY+V++ + + A L EMRD+ DV
Sbjct: 534 EAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 135/282 (47%), Gaps = 34/282 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N L+ G EG E+ + EM L PD SY+ L+ E ++ EA KL
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EEM +K V+ + V +N ++ +C+ G+M A +M SG VT+ L+NGYC+
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA------------ 412
AG++ A ++M RK + + T+ ++ LC ++++ EA +L +
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490
Query: 413 ---------------RVVKFG-------LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
R +K + P+ +Y +I GLC+ GK E+A+ E++
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
G P Y+ + GY +EG+VE A +M EN + +
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPD 592
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 157/374 (41%), Gaps = 62/374 (16%)
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI-WEVSRGKGVISGYEIY 219
++ LI CLE KI ++ + +G+ T N ++ W GK
Sbjct: 351 YNTLINGCLE---WSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKM-------- 399
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
DA+ I K P+ T+N L+ G+ + G + EM R +
Sbjct: 400 -------DDASNTITK--MEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMK 450
Query: 280 PDCYSYSVLMAVFCEERRMREAEKL----------------------------------- 304
D + + ++ C E+++ EA KL
Sbjct: 451 MDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKL 510
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W+EM++K + V YN IIGG C+ G+ +A E+ SG+ T+ +++GYCR
Sbjct: 511 WDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCR 570
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GDV+ A +N M F+P+ T +L+ LC + + +AL + V K T
Sbjct: 571 EGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDT-V 629
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI-----DGYMKEGNVEMATM 479
+Y LI LC+EG++++A + +EM K P Y+A I G ++E M+ M
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 480 LRKEMFENQVRQED 493
L K +QV Q D
Sbjct: 690 LEKGNLPDQVLQLD 703
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 121/247 (48%), Gaps = 6/247 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV+TFN ++ G+ E F+ + M + C PD +Y+ ++ C++ R+ +A
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDAR 263
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +M+ + + + YN ++ G+C++G + A M + + T+ L+NG
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G ++ A + ++M P+ + LI + ++ EA +L+ K G+ P
Sbjct: 324 CNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEK-GVKPN 382
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV-----EMA 477
++ ++K C+EGKM++A +M GF P Y+ I+GY K GN+ M
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMD 442
Query: 478 TMLRKEM 484
M RK M
Sbjct: 443 EMGRKNM 449
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 24/249 (9%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N ++ G + G E+ E+ G PD +Y+ ++ +C E + +A +
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M + + + DV N ++ G C G + +A + F G +VT+ L+ C+
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE- 423
G +D A + ++M K P+ T +I L D R+ EA + + +++++ G P +
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFM-SKMLEKGNLPDQV 699
Query: 424 ----------------------KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+Y IK LC EGK ++A+++ E KG Y
Sbjct: 700 LQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTY 759
Query: 462 SAFIDGYMK 470
+DG +K
Sbjct: 760 INLMDGLIK 768
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+V T N L+ G EG EK ++ G D +Y+ L+ C+E R+ +A
Sbjct: 590 KPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFN 649
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG---------------- 347
L EM +K + D YN II + G + AEEF +M G
Sbjct: 650 LLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVV 709
Query: 348 -------VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
+SSSV + + C G A+ ++ + +KG + ST L+ L +
Sbjct: 710 TSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKR 769
Query: 401 RR 402
R+
Sbjct: 770 RK 771
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 154/319 (48%), Gaps = 17/319 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ V+ + +++R S T N LI + + V E+ R + + GI
Sbjct: 345 EVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL------TSKGI-- 396
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
P+V TFN+L+ G +++ EM GCEPD ++Y++L+ C +
Sbjct: 397 --------LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
++ EA + ++M V+ YNT+I GFC+ ++ AEE F EM + GV +SVT+
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTY 508
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C++ V+ A + + M +G +P+ T L+ C + +A DI++A +
Sbjct: 509 NTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQA-MT 567
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G P +Y LI GLC+ G++E A K+ + KG + Y+ I G ++
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTT 627
Query: 476 MATMLRKEMFENQVRQEDG 494
A L +EM E D
Sbjct: 628 EAINLFREMLEQNEAAPDA 646
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +TFN L+ G + G + ++ M + G +PD Y+Y+ +++ C+ ++EA +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEF 352
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M ++ + V YNT+I C+ ++ A E R + G+ TF L+ G C
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ A+ ++ +M KG EP+ T +LI LC K ++ EAL++LK + G +
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCARSVI 471
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C+ K+ EA ++ EM G + Y+ IDG K VE A+ L +M
Sbjct: 472 TYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQM 531
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 146/314 (46%), Gaps = 21/314 (6%)
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSD----ATAGIG----KDVKRV 240
G+ VST N LI + R + + ++ +GL D T G D+
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGA 243
Query: 241 VRVRPNVHTF---------NALMVGFYREGAFEKVEDVWVEMARL-GCEPDCYSYSVLMA 290
+R+R + F N ++ GF +EG E + EM+ G PD Y+++ L+
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C+ ++ A ++ + M + + DV YN++I G C++GE+ A EF +M
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSP 363
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
++VT+ L++ C+ V+ A + + KG P+ T LI LC R A+++
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ K G P E +Y LI LC +GK++EAL + +M G S+ Y+ IDG+ K
Sbjct: 424 EEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 471 EGNVEMATMLRKEM 484
+ A + EM
Sbjct: 483 ANKIREAEEIFDEM 496
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 165/357 (46%), Gaps = 29/357 (8%)
Query: 152 RECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
R+C ++ LI C E ++E ++ R+L S+G+ V T N+LI + +
Sbjct: 359 RDCSPNTVTYNTLISTLCKE----NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 211 GVISGYEIYREV-----------FGLDSDATAGIGKDVKRVVRVRP--------NVHTFN 251
E++ E+ + + D+ GK + + ++ +V T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
L+ GF + + E+++ EM G + +Y+ L+ C+ RR+ +A +L ++M +
Sbjct: 475 TLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIME 534
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
+ D YN+++ FC G++ +A + + M +G E VT+ L++G C+AG V+ A
Sbjct: 535 GQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
+ + KG +I L KR+ EA+++ + + + P SY + +
Sbjct: 595 SKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFR 654
Query: 432 GLCE-EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY----MKEGNVEMATMLRKE 483
GLC G + EA+ E++ KGF P +G M+E V++ M+ ++
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQK 711
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 122/241 (50%), Gaps = 2/241 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ H +N ++ + VE +M+ G +PD +++VL+ C ++R A
Sbjct: 150 LKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAI 209
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ E+M + D + TI+ G+ E G++ A +M G S+V+ +V+G+
Sbjct: 210 LMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 363 CRAGDVDSAILVYNDMCRK-GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G V+ A+ +M + GF P+ T L+ LC V A++I+ +++ G P
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV-MLQEGYDP 328
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y +I GLC+ G+++EA++ +M+ + P+ Y+ I KE VE AT L
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 482 K 482
+
Sbjct: 389 R 389
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 102/209 (48%)
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G +PD + Y+ ++ + + ++ E +M ++ DV +N +I C ++
Sbjct: 148 FGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRP 207
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A +M G+ TF ++ GY GD+D A+ + M G ++ V++
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
C + RV +AL+ ++ + G FP + ++ L+ GLC+ G ++ A+++ M+ +G++
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P + Y++ I G K G V+ A +M
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEFLDQM 356
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 2/179 (1%)
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ N + Y I+ G + +M SG E + F L+ Y +
Sbjct: 75 KKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQ 134
Query: 369 DSAILVYNDMCRK-GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
D + V + M G +P+ ++ L D + + ++I A++ +G+ P ++
Sbjct: 135 DEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNL-KLVEIAHAKMSVWGIKPDVSTFN 193
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LIK LC ++ A+ + +M G P + ++ + GY++EG+++ A +R++M E
Sbjct: 194 VLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVE 252
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 161/315 (51%), Gaps = 26/315 (8%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
+D+++ + + + + N +I+ + + K V +++Y E+ + GI
Sbjct: 180 LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEM------VSKGIS------ 227
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
PNV T++AL+ GF+ G + D++ ++ +PD Y++++L+ FC++R+M+E
Sbjct: 228 ----PNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKE 283
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ ++ M + + DVV YN+++ G+C + E+ A+ F M GV ++ L+N
Sbjct: 284 GKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILIN 343
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G+C+ VD A+ ++N+M K P T LI L R+ AL ++ ++ G+
Sbjct: 344 GFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVD-QMHDRGVP 402
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK-EG------- 472
P +Y +I L + ++++A+ + + +G +PS+ Y+ IDG K EG
Sbjct: 403 PNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNT 462
Query: 473 -NVEMATMLRKEMFE 486
NV + +K +F+
Sbjct: 463 YNVMIHGFCKKGLFD 477
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 146/312 (46%), Gaps = 13/312 (4%)
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
T + + + + RG+ + CN LI+ + G+I +I++ L D +G +
Sbjct: 103 HTVLSLSQKMEFRGIKPNLFNCNILIYCFCQ-LGLIPC-QIHQAF--LFHDKLVALGFHL 158
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
+V ++ L+ G + G D+ + + + Y+ ++ C+++
Sbjct: 159 DQV--------SYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKH 210
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ +A L+ EM K + +VV Y+ +I GF +G++ A + F ++ L ++ TF
Sbjct: 211 VNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNI 270
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
LV+G+C+ + V+ M ++G P+ T L+ C + V A I + +
Sbjct: 271 LVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNT-MAQG 329
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G+ P +SY LI G C+ K+++A+ + EM K P++ Y++ IDG K G + A
Sbjct: 330 GVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYA 389
Query: 478 TMLRKEMFENQV 489
L +M + V
Sbjct: 390 LQLVDQMHDRGV 401
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 123/261 (47%), Gaps = 7/261 (2%)
Query: 238 KRVVRVRPN--VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE- 294
R++R P FN ++ + + V + +M G +P+ ++ ++L+ FC+
Sbjct: 75 NRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQL 134
Query: 295 ---ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
++ +A +++ D V+Y T+I G C++GE A + + + V+ +
Sbjct: 135 GLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLN 194
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+V + ++ G C+ V+ A +Y++M KG P T LI ++ +A+D+
Sbjct: 195 AVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFN 254
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+++ + P ++ L+ G C++ KM+E V A M+ +G P + Y++ +DGY
Sbjct: 255 -KIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLV 313
Query: 472 GNVEMATMLRKEMFENQVRQE 492
V A + M + V +
Sbjct: 314 KEVNTAKSIFNTMAQGGVNPD 334
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 153/362 (42%), Gaps = 48/362 (13%)
Query: 108 YATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKC 167
Y T+I+ + + + + A D+ + S P + + L+ + G DL K
Sbjct: 198 YNTVIYGMCKDKHVNDAFDLYS-EMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKI 256
Query: 168 CLE-------VKNIEKIETCVD--------IVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
LE NI C D + M+M +G+ V T N+L+
Sbjct: 257 ILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLM--------- 307
Query: 213 ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
GY + +EV TA + V P++ ++N L+ GF + +K +++ E
Sbjct: 308 -DGYCLVKEV------NTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNE 360
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M P+ +Y+ L+ + R+ A +L ++M D+ V +++ YN+II + +
Sbjct: 361 MHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQ 420
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ +A + G++ S T+ L++G C+ +G++ +T V
Sbjct: 421 VDKAIALITKFKDQGIQPSMYTYTILIDGLCKV---------------EGYDITVNTYNV 465
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
+I C K EAL +L +++ P +Y I+ L + + ++A K+ EM+ +
Sbjct: 466 MIHGFCKKGLFDEALSLL-SKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITR 524
Query: 453 GF 454
G
Sbjct: 525 GL 526
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 12/212 (5%)
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
SYS F + +A L+ + +N +N I+G + ++M
Sbjct: 53 SYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKM 112
Query: 344 GLSGVESSSVTFEHLVNGYCRAG----DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
G++ + L+ +C+ G + A L ++ + GF + + LI LC
Sbjct: 113 EFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCK 172
Query: 400 KRRVFEALDILK---ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
ALD+L+ ++V+ Y +I G+C++ + +A + +EMV KG P
Sbjct: 173 VGETRAALDLLQRVDGKLVQLN----AVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISP 228
Query: 457 SLEIYSAFIDGYMKEGNVEMAT-MLRKEMFEN 487
++ YSA I G+ G ++ A + K + EN
Sbjct: 229 NVVTYSALISGFFVVGKLKDAIDLFNKIILEN 260
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 20/133 (15%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM------------- 289
V PN+ T+N+++ ++ +K + + G +P Y+Y++L+
Sbjct: 401 VPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITV 460
Query: 290 -------AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
FC++ EA L +M+D + + V Y I + E +AE+ FRE
Sbjct: 461 NTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFRE 520
Query: 343 MGLSGVESSSVTF 355
M G+ + S ++
Sbjct: 521 MITRGLLNRSASY 533
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 134/245 (54%), Gaps = 1/245 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N+++ GF++EGA + + EM G PD +Y+ L+ C+ ++ A ++ +M
Sbjct: 571 TYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDM 630
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ K ++ DVVAY+ +I GFC++ +M A +FF E+ G+ ++V + +++G+ ++
Sbjct: 631 KYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNM 690
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
++A+ ++ +M + + +IG L + ++ ALD+ + K + P Y
Sbjct: 691 EAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSK-DIVPDIVMYTV 749
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI GL G++E A K+ EM G PS+ +Y+ I G +EGN++ A L EM +
Sbjct: 750 LINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKG 809
Query: 489 VRQED 493
+ +D
Sbjct: 810 LVPDD 814
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 180/372 (48%), Gaps = 34/372 (9%)
Query: 141 LKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
L+LF+ +V E G P +F +LI C +V ++EK ++++ G+ V
Sbjct: 345 LQLFDEVV----EGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLM---GIQPNVFI 397
Query: 199 CNALIWEVSRGKGVISGYEIYREVF--GLDSDATAGI--------GKDV-------KRVV 241
N+L+ + Y ++ E G+ + T I GK K V
Sbjct: 398 VNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVS 457
Query: 242 R-VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ + P++ ++N L++G ++G +K + + G +P+ +Y++L+ F ++
Sbjct: 458 KGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSER 517
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A ++E+M N+ +NT+I G + G ++ ++ G S+S+T+ +++
Sbjct: 518 AFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIID 577
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVKF 417
G+ + G VDSA+L Y +MC G P+ T LI LC ++ AL++ +K + +K
Sbjct: 578 GFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKL 637
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ +Y LI G C+ ME A K E++ G P+ +Y++ I G++ N+E A
Sbjct: 638 DVV----AYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAA 693
Query: 478 TMLRKEMFENQV 489
L +EM +N+V
Sbjct: 694 LNLHQEMIKNKV 705
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 201/497 (40%), Gaps = 98/497 (19%)
Query: 72 TQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVA 131
+F L K+NP AL+FF + K ++ + +IHILS + +
Sbjct: 61 NRFLVTLLSHKSNPKSALKFFHQVERKRGFVKTVDFISLLIHILSSNSKTCSSLQFLLNN 120
Query: 132 LRSPENDPKLKLFEVLVKTYRECG------SAPFVFDLLIKCCLEVKNIEKIETCVDIVR 185
+ P K+F V+ EC S VF+ L+K + V KI V+ R
Sbjct: 121 YVFGDATPSAKVF---VECLLECSGRYGFESDSRVFNYLLKSFVRVN---KITDAVECFR 174
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
++ L V N L+ + R V ++Y E+ GI D
Sbjct: 175 TMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEM------VERGIYGDC-------- 220
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE---------- 295
+T + +M +EG FE+VE + E G E D +YS+L+ C
Sbjct: 221 --YTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELL 278
Query: 296 RRMRE-------------------------AEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
+ MRE A +L +EM + +V+ +++ G+C +
Sbjct: 279 KEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVL 338
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP----- 385
G++ A + F E+ GV V F L+NG + GD++ A +Y M G +P
Sbjct: 339 GDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIV 398
Query: 386 ----EG-------------------------STIEVLIGELCDKRRVFEALDILKARVVK 416
EG T +L+ L + +V EA ++ + V K
Sbjct: 399 NSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSK 458
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G+ P+ SY LI G C++G M++A + ++ +G +P+ Y+ IDG+ K+G+ E
Sbjct: 459 -GITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSER 517
Query: 477 ATMLRKEMFENQVRQED 493
A ++ ++M + D
Sbjct: 518 AFVVFEQMMAANIAPTD 534
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 1/228 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V T+ +L+ G + ++ +M G + D +YS L+ FC+ M A
Sbjct: 600 ISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESAS 659
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K + E+ D + + V YN++I GF + M A +EM + V + ++ G
Sbjct: 660 KFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGL 719
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G + A+ +Y++M K P+ VLI L + ++ A ILK + + P+
Sbjct: 720 LKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILK-EMDGNNITPS 778
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
Y LI G EG ++EA ++ EM+ KG P Y ++G +K
Sbjct: 779 VLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLK 826
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 77/154 (50%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ + PN +N+++ GF E ++ EM + D Y+ ++ +E ++
Sbjct: 668 IGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSL 727
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L+ EM K++ D+V Y +I G G++ A + +EM + + S + + L+
Sbjct: 728 ALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIA 787
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
G R G++ A ++++M KG P+ +T ++L+
Sbjct: 788 GNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILV 821
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+V ++ + +++ G +EG D++ EM PD Y+VL+ ++ A
Sbjct: 704 KVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENA 763
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+ +EM N+ V+ YN +I G G + A EM G+ T++ LVNG
Sbjct: 764 SKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 186/424 (43%), Gaps = 43/424 (10%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFT--QHKSLCKHSLSSYATIIHILSRARLIGPARD 126
+TP ++ L N LA RFF + Q + C H++ SY T++ L++ R D
Sbjct: 65 VTPDVAERVLERLDNAGMLAYRFFEWARKQKRGGCNHTIRSYHTVVASLAKIRQYQLMWD 124
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
V+ + R E ++ F ++++ Y +K + V +
Sbjct: 125 VVAIMRR--EGVVNVETFGIIMRKYARA--------------------QKFDEAVYTFNI 162
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+ G+ ++ N+L+ + + K V EI+ ++ G R P+
Sbjct: 163 MEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNG-----------------RFNPD 205
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
T++ L+ G+ + K+ +V+ EM GC+PD +Y +++ C+ R+ EA + +
Sbjct: 206 AKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQ 265
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+M + + Y+ ++ + + A F +M G+ V + LV +C+
Sbjct: 266 DMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVK 325
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++A V +DM G P T +++ +L + EA + + R++K P +Y
Sbjct: 326 KFENAFRVMDDMEGHGIAPNSRTWNIILNKLISLGKDDEAYRVFR-RMIK-RCQPDSDTY 383
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+IK CE +E ALKV M K F PS+ +S I+G +G V A +L ++M E
Sbjct: 384 TMMIKMFCENDNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIE 443
Query: 487 NQVR 490
+R
Sbjct: 444 KGIR 447
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 96/219 (43%), Gaps = 22/219 (10%)
Query: 152 RECGSAPFVFDLLIKCC-LEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
R C F++ +L+ +E++ + + T +D+ + G+ V NAL+ + K
Sbjct: 270 RGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEK----DGIVPDVVVYNALVTAFCKVK 325
Query: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
+ + + D G G + PN T+N ++ G ++ V+
Sbjct: 326 KFENAFRVM--------DDMEGHG--------IAPNSRTWNIILNKLISLGKDDEAYRVF 369
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
M + C+PD +Y++++ +FCE + A K+W+ MR K + ++ +I G C+
Sbjct: 370 RRMIK-RCQPDSDTYTMMIKMFCENDNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDK 428
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
GE+++A +M G+ TF L + G D
Sbjct: 429 GEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKD 467
>gi|357442157|ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480404|gb|AES61607.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 190/440 (43%), Gaps = 51/440 (11%)
Query: 18 PKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQI 77
P +L + ST + P+D H + + + + K + L ++
Sbjct: 11 PFTSILRRLSTFN---PNDDVHKVYTILTTTSSPETLKQSLKSTQIFLSNELIDQVLKRV 67
Query: 78 ALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN 137
G NP+ L FF +T + H+ S T+++IL R+R+ +++ A R +N
Sbjct: 68 RFG-HANPNQTLEFFRYTGRRKGFYHTAYSLDTMLYILGRSRMFDHVWELLIEARRKDQN 126
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
V T R + V + K C + +E IV V+
Sbjct: 127 ----------VITPR---TVMVVLGRVAKVCSVRQTVETFRKFKKIVP-------DYGVN 166
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
NAL+ + + K + +Y + RPN+ TFN L+ G+
Sbjct: 167 CFNALLRTLCQEKSMTDARNVYHSLKH-----------------NFRPNLQTFNILLSGW 209
Query: 258 YREGAFEKVEDVWV---EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
+ VED + EM +G EPD +Y+ L+ V+C+ R + +A K+++EMR+K++
Sbjct: 210 ------KNVEDAELFVNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLS 263
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
DV+ Y ++IGG +G+ +A + +EM GV + + YC A + A +
Sbjct: 264 PDVITYTSVIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFEL 323
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
++M KG P +T + + + ++ K R++ G P +S MFLI+
Sbjct: 324 VDEMVNKGLSPNATTYNLFFRVFYWSNDLQSSWNLYK-RMMGEGCLPYTQSCMFLIRLFK 382
Query: 435 EEGKMEEALKVQAEMVGKGF 454
KME AL++ EMV KGF
Sbjct: 383 RHEKMEMALQLWGEMVEKGF 402
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 197/417 (47%), Gaps = 43/417 (10%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
AL F Q CK + SY T+++ A R S + P L+ + +L
Sbjct: 99 ALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRY-FESMDVSPNLQTYNIL 157
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
+K I C ++IE + ++ + S+ L V + LI +
Sbjct: 158 IK---------------ISC-----KKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMV 197
Query: 208 RGKGVISGYEIYRE--VFGLDSDATA--------------GIGKDV-KRVVR---VRPNV 247
+ ++ +++ E V G+ +D T GK++ +R+V+ V PNV
Sbjct: 198 KVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNV 257
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
T+N ++ G + G F++ ++W M + E D ++YS L+ CE + A ++++E
Sbjct: 258 VTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKE 317
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
+ + ++ D V +N ++ GFC G++ + E + MG + + V++ L+ G G
Sbjct: 318 IVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGK 376
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
V+ AI ++ +C+KG PE +T VLI LC R+ +AL I K G +Y
Sbjct: 377 VEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDA-YAYS 435
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ GLC+EG+M+EA+ + +M +G++ + + I+G+++ +E A +EM
Sbjct: 436 SMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREM 492
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 157/347 (45%), Gaps = 23/347 (6%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
D L+++E + K RE F + LI E NI+ V + + ++ L V
Sbjct: 274 DESLEIWERMTKNERE--KDMFTYSSLIHGLCEAGNID---GAVRVYKEIVESSLVVDAV 328
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T NA++ R + +E++ V G ++ T V ++N L+ G
Sbjct: 329 THNAMLNGFCRAGKIKESFELWM-VMGKENCQT----------------VVSYNILIKGL 371
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G E+ +W + + GC P+ +Y VL+ C+ R+ +A K+++E D + D
Sbjct: 372 FENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDA 431
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
AY++++ G C+ G M A +M G + L+NG+ RA ++ AI + +
Sbjct: 432 YAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFRE 491
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
M KG P + LI LC R EA +K + K P + L+ GLC+E
Sbjct: 492 MECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEK-EWKPDMITCSLLMDGLCQEK 550
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
K+E AL + + + KGF+P + +Y+ + G +E A L M
Sbjct: 551 KIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHM 597
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 120/238 (50%), Gaps = 2/238 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T NA++ GF R G ++ ++W+ M + C+ SY++L+ E ++ EA +WE +
Sbjct: 329 THNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKVEEAISIWELL 387
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
K + Y +I G C+ G + +A + F+E + + + +V+G C+ G +
Sbjct: 388 CKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRM 447
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D AI + N M ++G++ + LI ++ +A++ + K G PT SY
Sbjct: 448 DEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECK-GCSPTIVSYNT 506
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LIKGLC+ + EA EM+ K ++P + S +DG +E +EMA L ++ +
Sbjct: 507 LIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALD 564
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 128/253 (50%), Gaps = 9/253 (3%)
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
++++ + +P V ++N L+ F +++ E + P+ +Y++L+ + C+
Sbjct: 104 QNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCK 163
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
++++ +A L + M +N++ DV +Y T+I G ++G++ A + F EM + GV +
Sbjct: 164 KQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTC 223
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRK-GFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
+ L++G+ + GD D ++ + + P T ++I LC R E+L+I + R
Sbjct: 224 YNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWE-R 282
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+ K +Y LI GLCE G ++ A++V E+V ++A ++G+ + G
Sbjct: 283 MTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGK 342
Query: 474 VEMATMLRKEMFE 486
+ KE FE
Sbjct: 343 I-------KESFE 348
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 146/343 (42%), Gaps = 27/343 (7%)
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
FE+ + +E +++LIK E K+E + I +L +G + +T LI
Sbjct: 347 FELWMVMGKENCQTVVSYNILIKGLFENG---KVEEAISIWELLCKKGCRPESTTYGVLI 403
Query: 204 W----------------EVSRGKGVISGYEIYREVFGL-----DSDATAGIGKDVKRVVR 242
E G G + Y V GL +A + + + KR +
Sbjct: 404 HGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYK 463
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P H N L+ GF R E + + EM GC P SY+ L+ C+ R EA
Sbjct: 464 LDP--HVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAY 521
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+EM +K + D++ + ++ G C+ ++ A +++ G + + L++G
Sbjct: 522 SFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGL 581
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C ++ A+ +Y+ M R P T L+ L R +A +I ++K GL P
Sbjct: 582 CSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDC-ILKDGLHPD 640
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
SY IKGLC ++ +A++ + + +G P+ ++ +
Sbjct: 641 IISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILV 683
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 112/257 (43%), Gaps = 17/257 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ + IV + RG + CN LI R + +RE+
Sbjct: 446 RMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREM------------- 492
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
P + ++N L+ G + F + EM +PD + S+LM C+E
Sbjct: 493 ---ECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQE 549
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+++ A LW++ DK + D+ YN ++ G C + ++ A + + M S + VT
Sbjct: 550 KKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTR 609
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+ G + D + A +++ + + G P+ + + I LC R+ +A++ L +
Sbjct: 610 NTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALN 669
Query: 416 KFGLFPTEKSYMFLIKG 432
+ G+ PT ++ L++
Sbjct: 670 R-GILPTAVTWNILVRA 685
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 135/282 (47%), Gaps = 34/282 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N L+ G EG E+ + EM L PD SY+ L+ E ++ EA KL
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EEM +K V+ + V +N ++ +C+ G+M A +M SG VT+ L+NGYC+
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA------------ 412
AG++ A ++M RK + + T+ ++ LC ++++ EA +L +
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490
Query: 413 ---------------RVVKFG-------LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
R +K + P+ +Y +I GLC+ GK E+A+ E++
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
G P Y+ + GY +EG+VE A +M EN + +
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPD 592
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 156/374 (41%), Gaps = 62/374 (16%)
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI-WEVSRGKGVISGYEIY 219
++ LI CLE KI ++ + +G+ T N ++ W GK
Sbjct: 351 YNTLINGCLE---WSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKM-------- 399
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
DA+ I K P+ T+N L+ G+ + G + EM R +
Sbjct: 400 -------DDASNTITK--MEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMK 450
Query: 280 PDCYSYSVLMAVFCEERRMREAEKL----------------------------------- 304
D + + ++ C E+++ EA KL
Sbjct: 451 MDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKL 510
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W+EM++K + V YN IIGG C+ G+ +A E+ SG+ T+ +++GYCR
Sbjct: 511 WDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCR 570
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GDV+ A +N M F+P+ T +L+ LC + + +AL + V K T
Sbjct: 571 EGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDT-V 629
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI-----DGYMKEGNVEMATM 479
+Y LI LC+EG++++A + +EM K P Y+A I G ++E M+ M
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 480 LRKEMFENQVRQED 493
L K QV Q D
Sbjct: 690 LEKGXLPXQVLQLD 703
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 121/247 (48%), Gaps = 6/247 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV+TFN ++ G+ E F+ + M + C PD +Y+ ++ C++ R+ +A
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDAR 263
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +M+ + + + YN ++ G+C++G + A M + + T+ L+NG
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G ++ A + ++M P+ + LI + ++ EA +L+ K G+ P
Sbjct: 324 CNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEK-GVKPN 382
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV-----EMA 477
++ ++K C+EGKM++A +M GF P Y+ I+GY K GN+ M
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMD 442
Query: 478 TMLRKEM 484
M RK M
Sbjct: 443 EMGRKNM 449
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 24/249 (9%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N ++ G + G E+ E+ G PD +Y+ ++ +C E + +A +
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M + + + DV N ++ G C G + +A + F G +VT+ L+ C+
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE- 423
G +D A + ++M K P+ T +I L D R+ EA + + +++++ G P +
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFM-SKMLEKGXLPXQV 699
Query: 424 ----------------------KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+Y IK LC EGK ++A+++ E KG Y
Sbjct: 700 LQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTY 759
Query: 462 SAFIDGYMK 470
+DG +K
Sbjct: 760 INLMDGLIK 768
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+V T N L+ G EG EK ++ G D +Y+ L+ C+E R+ +A
Sbjct: 590 KPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFN 649
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV--------------- 348
L EM +K + D YN II + G + AEEF +M G
Sbjct: 650 LLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVV 709
Query: 349 --------ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
+SSSV + + C G A+ ++ + +KG + ST L+ L +
Sbjct: 710 TSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKR 769
Query: 401 RR 402
R+
Sbjct: 770 RK 771
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 124/249 (49%), Gaps = 1/249 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D ++PN +FN ++ R G ++ +V+ M+ C D Y+YS LM C E
Sbjct: 164 DSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNE 223
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ EA L +EM+ + + VA+N +I C+ G+++RA + M L G + VT+
Sbjct: 224 GRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTY 283
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
LV+G C G +D A+ + N M P T L+ R + + +L +
Sbjct: 284 NSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEE 343
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K G E SY LI GL +EGK E +++ EMV KG +P+ +YSA IDG +EG +
Sbjct: 344 K-GYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPD 402
Query: 476 MATMLRKEM 484
A EM
Sbjct: 403 EAKEYLIEM 411
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 120/245 (48%), Gaps = 5/245 (2%)
Query: 245 PNVHTFNALMVGFYREG-AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
PN TF L+ GF + G A + V V V + G + +SYS L++ +E + +
Sbjct: 313 PNDITFGTLVDGFVKHGRALDGVR-VLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQ 371
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
LW+EM +K + + + Y+ +I G C G+ A+E+ EM G +S T+ L+ GY
Sbjct: 372 LWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYF 431
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
AGD+ AILV+ +M +LI LC ++ EAL + K +++ G+
Sbjct: 432 EAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWK-QMLSRGIKLDV 490
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMV--GKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y +I G C +E+ +K+ +M+ +P + Y+ ++ + + +V A +
Sbjct: 491 VAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDIL 550
Query: 482 KEMFE 486
M +
Sbjct: 551 NTMLD 555
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 108/223 (48%), Gaps = 1/223 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
R N ++++L+ G ++EG E +W EM GC+P+ YS L+ C E + EA++
Sbjct: 347 RGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKE 406
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
EM++K + Y++++ G+ E G++ +A ++EM + V + L+NG C
Sbjct: 407 YLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLC 466
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV-KFGLFPT 422
+ G + A++V+ M +G + + +I C+ + V + + + + L P
Sbjct: 467 KNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPD 526
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+Y L+ C + + A+ + M+ +G +P F+
Sbjct: 527 VVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFL 569
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 24/222 (10%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+++LM G++ G K VW EM C YS+L+ C+ +++EA +
Sbjct: 418 PNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIV 477
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG--VESSSVTFEHLVNGY 362
W++M + ++ DVVAY+++I GFC + + + F +M ++ VT+ L+N +
Sbjct: 478 WKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAF 537
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD---------------------KR 401
C V AI + N M +G +P+ T ++ + L D ++
Sbjct: 538 CTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQ 597
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
R A +I++ + KF L P ++ ++ LC+ K+ + +
Sbjct: 598 RTVGASNIIEVMLQKF-LLPKPSTWALAVQQLCKPMKVRKTI 638
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 114/246 (46%), Gaps = 11/246 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N+L+ G +G +K + M C P+ ++ L+ F + R + ++
Sbjct: 278 PNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRV 337
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +K + +Y+++I G + G+ + ++EM G + +++ + L++G CR
Sbjct: 338 LVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCR 397
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT-- 422
G D A +M KG P T L+ FEA DI KA +V +
Sbjct: 398 EGKPDEAKEYLIEMKNKGHTPNSFTYSSLMW------GYFEAGDIHKAILVWKEMTDNDC 451
Query: 423 ---EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
E Y LI GLC+ GK++EAL V +M+ +G + + YS+ I G+ VE
Sbjct: 452 NHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMK 511
Query: 480 LRKEMF 485
L +M
Sbjct: 512 LFNQML 517
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 148/326 (45%), Gaps = 20/326 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
F ++ L+ ++ ++ +E + ++SRG+ V+T N LI K + ++I
Sbjct: 177 FTYNFLLNVLVDGNKLKLVEI---VNSRMVSRGIKPDVTTFNILI------KALCRAHQI 227
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+ ++ + G+ D K TF LM GF EG + +M GC
Sbjct: 228 RPAILMMEEMGSYGLSPDEK----------TFTTLMQGFIEEGNMNGALRIREQMVAAGC 277
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+ +VL+ +C+E R+ E +EM ++ D +N+++ G C IG + A E
Sbjct: 278 PSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALE 337
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
M G + T+ L+ G C+ G+V+ A+ + N M + F P T LI LC
Sbjct: 338 ILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLC 397
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ +V EA ++ + K G+ P ++ LI+GLC A+++ EM KG P
Sbjct: 398 KENQVEEATELARVLTSK-GILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDE 456
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ ID G +E A L KEM
Sbjct: 457 FTYNMLIDSLCSRGRLEEALSLLKEM 482
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 147/311 (47%), Gaps = 17/311 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++E V+I+ ++ R S T N LI + + V E+ R + + GI
Sbjct: 366 EVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVL------TSKGI-- 417
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
P+V TFN+L+ G +++ EM GC PD ++Y++L+ C
Sbjct: 418 --------LPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSR 469
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ EA L +EM +VV YNT+I GFC+ + AEE F EM L G+ + VT+
Sbjct: 470 GRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTY 529
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C+ V+ A + + M +G +P+ T L+ C + +A DI++ +
Sbjct: 530 NTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQT-MT 588
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G P +Y LI GL + G++E A ++ + KG + + Y+ I +E
Sbjct: 589 SNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTS 648
Query: 476 MATMLRKEMFE 486
A L +EM E
Sbjct: 649 EAVRLFREMME 659
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE-- 302
P++ T+N+L+ G + G E+ ++ +M P+ +Y+ L++ C+E ++ EA
Sbjct: 349 PDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATEL 408
Query: 303 ---------------------------------KLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+L+EEM+ K D YN +I C
Sbjct: 409 ARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCS 468
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G + A +EM SG + VT+ L++G+C+ ++ A ++++M +G T
Sbjct: 469 RGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVT 528
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
LI LC RRV EA ++ +++ GL P + +Y L+ C G +++A + M
Sbjct: 529 YNTLIDGLCKNRRVEEAAQLMDQMLME-GLKPDKFTYNSLLTYFCRAGDIKKAADIVQTM 587
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
G EP Y I G K G VE+A+ L
Sbjct: 588 TSNGCEPDSVTYGTLILGLSKAGRVELASRL 618
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 147/312 (47%), Gaps = 21/312 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV------------- 222
++E ++ R+L S+G+ V T N+LI + E++ E+
Sbjct: 401 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYN 460
Query: 223 FGLDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+DS + G ++ +++ NV T+N L+ GF + E+ E+++ EM
Sbjct: 461 MLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQ 520
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G + +Y+ L+ C+ RR+ EA +L ++M + ++ D YN+++ FC G++ +A
Sbjct: 521 GISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKA 580
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ + M +G E SVT+ L+ G +AG V+ A + + KG T +I
Sbjct: 581 ADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKA 640
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE-EGKMEEALKVQAEMVGKGFE 455
L ++R EA+ + + + K G P +Y + +GLC G + EA+ EM KGF
Sbjct: 641 LFREKRTSEAVRLFREMMEK-GDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFL 699
Query: 456 PSLEIYSAFIDG 467
P + +G
Sbjct: 700 PDFSSFLMLAEG 711
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 145/324 (44%), Gaps = 30/324 (9%)
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
++LFE + KT + C F +++LI + + ++E + +++ + S G S V T N
Sbjct: 441 MELFEEM-KT-KGCHPDEFTYNMLID---SLCSRGRLEEALSLLKEMESSGCSRNVVTYN 495
Query: 201 ALIWEVSRGKGVISGYEIYRE--VFGLDSDATA------GIGKDVKRVVR---------- 242
LI + K + EI+ E + G+ + G+ K+ +RV
Sbjct: 496 TLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKN-RRVEEAAQLMDQMLM 554
Query: 243 --VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
++P+ T+N+L+ F R G +K D+ M GCEPD +Y L+ + R+
Sbjct: 555 EGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVEL 614
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +L ++ K + YN +I + A FREM G +VT++ +
Sbjct: 615 ASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFR 674
Query: 361 GYCR-AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
G C G + A+ +M KGF P+ S+ +L LC + + L L RV+K
Sbjct: 675 GLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLC-ALSMEDTLIKLVNRVMKQAN 733
Query: 420 FPTEKSYMFLIKGLCEEGKMEEAL 443
F S + +I G + K ++AL
Sbjct: 734 F--SDSEVSMIMGFLKIRKFQDAL 755
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 109/234 (46%), Gaps = 2/234 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + ++ ++G+F + V EM GCE ++ +L+ + + EA +
Sbjct: 103 PSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAV 162
Query: 305 WEEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ M ++ ++ D YN ++ + ++ E M G++ TF L+ C
Sbjct: 163 VDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALC 222
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
RA + AIL+ +M G P+ T L+ ++ + AL I + ++V G +
Sbjct: 223 RAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRI-REQMVAAGCPSSN 281
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ L+ G C+EG++EE L EM +GF P +++ ++G + G+V+ A
Sbjct: 282 VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHA 335
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 58/134 (43%)
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
SSV +E ++ + G S V +M G E T +LI EA+ ++
Sbjct: 104 SSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVV 163
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+FGL +Y FL+ L + K++ V + MV +G +P + ++ I +
Sbjct: 164 DIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCR 223
Query: 471 EGNVEMATMLRKEM 484
+ A ++ +EM
Sbjct: 224 AHQIRPAILMMEEM 237
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 123/231 (53%), Gaps = 1/231 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P++ TFN L+ G G + ++ + G PD +SY++L+ +C+ +R+ EA
Sbjct: 326 QPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVS 385
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+ EMR KN+ D+V Y+++I G C+ G ++ A E F + G + +T+ L++ +C
Sbjct: 386 LFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFC 445
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ D+D I ++ MC KG P T +LI C +R+ EA+++L K L P
Sbjct: 446 KIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSK-NLAPDS 504
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+Y L GLC+ G++ +A ++ M G + Y+ +D + K +V
Sbjct: 505 ITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 121/243 (49%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ PNV+TFN L+ F R+G + + ++ M + G +PD +++ L++ C + EA
Sbjct: 289 NINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEA 348
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KL++ + ++ + DV +Y +I G+C+ + A F EM + V + L++G
Sbjct: 349 RKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDG 408
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C++G + A +++ + G P T +LI C + + +++ K K GL P
Sbjct: 409 LCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGK-GLTP 467
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
T +Y LI G C+ ++ EA+ + + M K P Y++ DG K G + A L
Sbjct: 468 TVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELF 527
Query: 482 KEM 484
K M
Sbjct: 528 KVM 530
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 126/242 (52%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+PN+ +N ++ F ++ K D+++++ +G +PD +Y+ L+ FC + E +
Sbjct: 220 VKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVK 279
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM +KN+ +V +N +I FC G+M A+ F M G + VTF L++G+
Sbjct: 280 QLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGH 339
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G+V A +++ + +G P+ + +LI C +R+ EA+ + K +
Sbjct: 340 CLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCK-NMVLD 398
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y LI GLC+ G++ A ++ + + G P++ Y+ ID + K +++M L K
Sbjct: 399 IVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFK 458
Query: 483 EM 484
M
Sbjct: 459 LM 460
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN T +M G G +K D +A G D Y L+ C+ R +A +
Sbjct: 151 QPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQ 210
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +EM + V+ ++V YN II FC+ +A + + ++ G++ +T+ L+ G+C
Sbjct: 211 LLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFC 270
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G + +M K P T VLI C K ++ EA + +VK G P
Sbjct: 271 RTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNL-MVKRGQQPDI 329
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++ LI G C G + EA K+ + +G P + Y+ I GY K ++ A L E
Sbjct: 330 VTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNE 389
Query: 484 M 484
M
Sbjct: 390 M 390
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 100/228 (43%), Gaps = 1/228 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V FN ++ + + +M G P ++ S+ + +C M A +
Sbjct: 82 PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + + + + T++ G C GE+ +A +F + G+ V + L+NG C+
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCK 201
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G A + +M + +P ++I C +A D L ++V G+ P
Sbjct: 202 IGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARD-LYLKIVDMGIDPDIL 260
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+Y LI+G C G+ E ++ EMV K P++ ++ ID + ++G
Sbjct: 261 TYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKG 308
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 108/244 (44%), Gaps = 1/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P++ T + + + G V + + G +P+ + + +M C +++A
Sbjct: 115 VTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAM 174
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + + + D V Y T+I G C+IG A + +EM V+ + V + +++ +
Sbjct: 175 DFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSF 234
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ A +Y + G +P+ T LI C + E ++ +V + P
Sbjct: 235 CKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLM-CEMVNKNINPN 293
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ LI C +GKM EA + MV +G +P + ++ I G+ GNV A L
Sbjct: 294 VYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFD 353
Query: 483 EMFE 486
+FE
Sbjct: 354 TVFE 357
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P V T+N L+ G+ + + ++ M PD +Y+ L C+ R+ +A
Sbjct: 465 LTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAW 524
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
+L++ M DV YN ++ FC+ ++A
Sbjct: 525 ELFKVMHVGGPPVDVATYNVLLDAFCKAQDVA 556
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 132/246 (53%), Gaps = 1/246 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ PNV TF+AL+ +EG + +D++ EM G EP+ +Y+ L+ C ++R+ EA
Sbjct: 330 KITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEA 389
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++ + M K + D+ YN +I GFC+ ++ FR+M L G+ + +VT+ L+ G
Sbjct: 390 NQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQG 449
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C++ + A V+ +M +G P T +L+ LCD + EAL IL ++ K +
Sbjct: 450 FCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILD-QMHKCKMEL 508
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y +I G+C K+++A + + KG + ++ Y+ + G K ++ A L
Sbjct: 509 DIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALF 568
Query: 482 KEMFEN 487
++M E+
Sbjct: 569 RKMKED 574
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 151/320 (47%), Gaps = 17/320 (5%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
+++ VD++ +M+ G T ++ + + S ++ R++
Sbjct: 209 DRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKM------------ 256
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+++P+V T+ ++ ++G + + EM G + + ++Y+ L+ FC
Sbjct: 257 ----EHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCS 312
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R + +L +M + + +VV ++ +I + G++ A++ + EM G+E +++T
Sbjct: 313 FGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTIT 372
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ G C +D A + + M KG +P+ T +LI C ++V + + + +
Sbjct: 373 YNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMS 432
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
++ G+ +Y LI+G C+ K+ A KV EMV +G P + Y+ +DG G +
Sbjct: 433 LR-GMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGEL 491
Query: 475 EMATMLRKEMFENQVRQEDG 494
E A + +M + ++ + G
Sbjct: 492 EEALGILDQMHKCKMELDIG 511
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T N ++ G + + D+ M GC+P+ ++Y ++ C+ A L
Sbjct: 193 PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDL 252
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M + ++ VV Y II C+ G + A FF EM G++++ T+ L+ +C
Sbjct: 253 LRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCS 312
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G D + DM + P T LI L + ++ EA D+ + + G+ P
Sbjct: 313 FGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITR-GIEPNTI 371
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI GLC + +++EA ++ MV KG +P + Y+ I+G+ K V+ L ++M
Sbjct: 372 TYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKM 431
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 115/235 (48%), Gaps = 1/235 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ NV T+N+L+ F G ++ + +M P+ ++S L+ +E ++ EA+
Sbjct: 296 IKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAK 355
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ EM + +E + + YN++I G C + A + M G + T+ L+NG+
Sbjct: 356 DLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGF 415
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A VD + ++ M +G + T LI C R++ A + + V + G+ P
Sbjct: 416 CKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQ-GVHPG 474
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y L+ GLC+ G++EEAL + +M E + IY+ I G V+ A
Sbjct: 475 IMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDA 529
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 114/239 (47%), Gaps = 1/239 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+++T N ++ F R ++ +LG EP+ +++ L+ C E R+ EA +L
Sbjct: 124 DLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELV 183
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M D++ NTI+ G C ++ A + M +G + + T+ ++N C++
Sbjct: 184 DCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKS 243
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G+ SA+ + M + +P T ++I LC R+ +AL K G+ +
Sbjct: 244 GNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETK-GIKANVFT 302
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI C G+ ++ ++ +M+ + P++ +SA ID +KEG + A L EM
Sbjct: 303 YNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEM 361
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 7/251 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P V FN L R ++ V + +M G D Y+ ++++ FC R++ A
Sbjct: 85 RPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFA 144
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++ E + V +NT++ G C G + A E M LS +T +VNG
Sbjct: 145 FSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNG 204
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA---RVVKFG 418
C V A+ + M G +P T ++ +C ALD+L+ R +K
Sbjct: 205 LCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIK-- 262
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
P +Y +I LC++G++++AL +EM KG + ++ Y++ I + G +
Sbjct: 263 --PHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGA 320
Query: 479 MLRKEMFENQV 489
L ++M ++
Sbjct: 321 QLLRDMITRKI 331
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 115/244 (47%), Gaps = 19/244 (7%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDAT 230
N ++++ ++ +++S+G + T N LI + K V G ++R++ G+ +D
Sbjct: 382 NDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTV 441
Query: 231 A------GIGKDVKRVVR-----------VRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
G + K +V V P + T+ L+ G G E+ + +M
Sbjct: 442 TYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQM 501
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
+ E D Y++++ C ++ +A L+ + K V+ D+ +YN ++ G C+ +
Sbjct: 502 HKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSL 561
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+ A+ FR+M G E T+ L+ + R D+ +++ + +M R GF + ST++++
Sbjct: 562 SEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIV 621
Query: 394 IGEL 397
+ L
Sbjct: 622 MDML 625
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 87/191 (45%), Gaps = 1/191 (0%)
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A L++ M V+ +N + G + ++M L G+ T ++
Sbjct: 73 DAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMI 132
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
N +CR + A + + G+EP T L+ LC + RVFEA++++ V+ +
Sbjct: 133 NCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHV 192
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P + ++ GLC + ++ EA+ + A M+ G +P+ Y ++ K GN A
Sbjct: 193 -PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251
Query: 480 LRKEMFENQVR 490
L ++M +++
Sbjct: 252 LLRKMEHRKIK 262
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 126/247 (51%), Gaps = 1/247 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN ++ L+ G+ +GA V D+ M R G + ++++L+ + + + +A
Sbjct: 340 KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMT 399
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ EMR + DVV+Y+T+I C+IG + A F +M G+ + ++F L++G C
Sbjct: 400 AFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLC 459
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G+ + +M +G P+ + ++ LC + RV EA D V+ G+ P
Sbjct: 460 SIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDM-VIHIGVKPNV 518
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
SY LI G C GKM+E++K MV G P Y+A ++GY K G VE A L +E
Sbjct: 519 VSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYRE 578
Query: 484 MFENQVR 490
MF V+
Sbjct: 579 MFRKDVK 585
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 122/240 (50%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV +++ ++ GF++EG +K ++ EM G PD +YS L+ C+ + M +AE +
Sbjct: 201 PNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAI 260
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M DK V + YN +I G+C +G++ A ++M SG++ VT+ L+ YC+
Sbjct: 261 LQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCK 320
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G A V++ M RKG +P + +L+ K + + D+L +++ G+ +
Sbjct: 321 IGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDL-MIRDGIPFEHR 379
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI + G +++A+ EM G P + YS I K G VE A +M
Sbjct: 380 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQM 439
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 129/240 (53%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ +F +L+ G G ++KVE++ EM G PD + +M C+E R+ EA+
Sbjct: 446 PNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDF 505
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ + V+ +VV+YNT+I G+C +G+M + + F M G+ S T+ L+NGY +
Sbjct: 506 FDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFK 565
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G V+ A+ +Y +M RK + T +++ L R+ A + L ++V G +
Sbjct: 566 NGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARE-LYMKMVDRGTQLRIE 624
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y ++ GLCE ++EAL++ ++ K FE + ++ I+ +K G ++ A L M
Sbjct: 625 TYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAM 684
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 115/228 (50%), Gaps = 5/228 (2%)
Query: 249 TFNALMVGFYREGAFEKVED-VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
T N L+ G + D V+ M LG PD +SY+ L+ C E++ +EA +L
Sbjct: 131 TLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLH 190
Query: 308 MRDK---NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M N +VV+Y+TII GF + GE+ +A F EM G VT+ L++G C+
Sbjct: 191 MTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCK 250
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A ++ A + M KG P T ++I C ++ EA+ +LK ++ GL P
Sbjct: 251 AQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLK-KMSGSGLQPDVV 309
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+Y+ LI+ C+ G+ EA V MV KG +P+ IY + GY +G
Sbjct: 310 TYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKG 357
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 4/251 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG---CEPDCYSYSVLMAVFCEERRMREA 301
P+V ++NAL+ G E ++ ++ + M G C P+ SYS ++ F +E + +A
Sbjct: 163 PDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKA 222
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L++EM + DVV Y+++I G C+ M +AE + M GV ++ T+ ++ G
Sbjct: 223 YFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRG 282
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC G ++ A+ + M G +P+ T +LI C R EA + + V K G P
Sbjct: 283 YCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRK-GQKP 341
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y L+ G +G + + + M+ G ++ I Y K G V+ A
Sbjct: 342 NSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAF 401
Query: 482 KEMFENQVRQE 492
EM +N +R +
Sbjct: 402 TEMRQNGLRPD 412
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 1/232 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN T+N ++ G+ G E+ + +M+ G +PD +Y +L+ +C+ R EA
Sbjct: 269 VMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEAR 328
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ M K + + Y+ ++ G+ G + + M G+ F L+ Y
Sbjct: 329 SVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAY 388
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G VD A+ + +M + G P+ + +I LC RV +A+ ++V GL P
Sbjct: 389 AKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFN-QMVSEGLSPN 447
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
S+ LI GLC G+ ++ ++ EM+ +G P + +D KEG V
Sbjct: 448 IISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 499
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 116/237 (48%), Gaps = 1/237 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ V+PNV ++N L+ G+ G ++ + M +G PD ++Y+ L+ + + R+ +
Sbjct: 512 IGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVED 571
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L+ EM K+V+ + N I+ G + G + A E + +M G + T+ ++
Sbjct: 572 ALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLG 631
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C VD A+ ++ D+ K FE + T ++I L R+ EA + A V++ G
Sbjct: 632 GLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLR-GPV 690
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P +Y +IK EEG +EE+ + M G + + I +++G+V A
Sbjct: 691 PHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRA 747
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 334 ARAEEFFREMGLSGVE---SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
A A F M SGV ++ L+ +C G +D A + + G+ + T+
Sbjct: 73 ALAVSLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTL 132
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
LI LCD +R +A+D++ R+ + G P SY LIKGLC E K +EAL++ M
Sbjct: 133 NQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMT 192
Query: 451 GKG---FEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G P++ YS IDG+ KEG V+ A L EM
Sbjct: 193 ADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEM 229
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI-LVYNDMCRK 381
+I FC +G + A F G +VT L+ G C D A+ +V+ M
Sbjct: 100 LIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPEL 159
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL--FPTEKSYMFLIKGLCEEGKM 439
G+ P+ + LI LC +++ EAL++L G P SY +I G +EG++
Sbjct: 160 GYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEV 219
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++A + EM+G+GF P + YS+ IDG K + A + + MF+ V
Sbjct: 220 DKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGV 269
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 121/287 (42%), Gaps = 26/287 (9%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ K++ + ++S GL T NAL+ + V +YRE+F
Sbjct: 531 VGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMF---------- 580
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
KDVK T N ++ G ++ G +++++M G + +Y+ ++ C
Sbjct: 581 RKDVKFCAI------TSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLC 634
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
E + EA +++E++R K E DV +N +I ++G + A+ F M L G +
Sbjct: 635 ENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVI 694
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ ++ G ++ + ++ M + G + + V+I RR+ E D+ +A
Sbjct: 695 TYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVII------RRLLEKGDVRRAG 748
Query: 414 VVKFGL----FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+ F E S L+ + E K ++ +K E +P
Sbjct: 749 TYLTKIDEKNFSVEASTAALLIPIVSEKKYQKEVKFLPEKYHSFMQP 795
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 134/543 (24%), Positives = 241/543 (44%), Gaps = 90/543 (16%)
Query: 12 SVSKPKP------KPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRS----------- 54
S SK P KP L S T S T PS H S HH+S
Sbjct: 3 STSKTVPSASSIVKPNLSSSLFTHSPTIPSSNPH------FSSAVHHKSLNVSPQNFNTP 56
Query: 55 ---KSRWNHLLSLCRSG-LTPTQ-FSQIALGLKNNPHLALRFFSFTQHKS-LCKHSLSSY 108
+ + + L C++G +T TQ F L + +NP L SFT S L K + Y
Sbjct: 57 ISFQQQLSMFLHNCKTGNITATQAFQFFHLMMYSNPTPPLS--SFTHLLSGLAK--IKHY 112
Query: 109 ATIIHILSRARLIGPARD--VIRVALRSPENDPKL-KLFEVLVKTYRECGSAPFV--FDL 163
+ + ++ ++ RL G + D + + L N ++ + V+ R G P + +
Sbjct: 113 SQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRR-GYIPDIVTYTT 171
Query: 164 LIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
LIK C+E +I + + G + T L+ + R + ++++E+
Sbjct: 172 LIKGLCME----HRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEM 227
Query: 223 FGLDSDATAGIG----------------KDVK-----------RVVRVRPNVHTFNALMV 255
L+ + GI KD + +V + P V ++ +L+
Sbjct: 228 --LNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIH 285
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
GF G +E+ + ++ EM G +P+ +++VL+ V C+E ++ EA+ L E M + +
Sbjct: 286 GFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVP 345
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
+++ YN++I GFC +G++ A E F M G E + + L+NGYC+ V+ A+ +Y
Sbjct: 346 NLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLY 405
Query: 376 NDMCRKGFEPEGSTIEVLI------GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
N M + G P+ T L+ G++ D +++F + + +G+ Y
Sbjct: 406 NGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKV-------YGIPGDLYIYGIF 458
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ GLC+ G + EA+++ ++ + +E ++ IDG K G +E A E+FE
Sbjct: 459 LNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAW----ELFEKLP 514
Query: 490 RQE 492
++E
Sbjct: 515 QEE 517
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 122/255 (47%), Gaps = 39/255 (15%)
Query: 234 GKDVKRVVRVR---PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
KD+ V+ R PN+ T+N+L+ GF G +++V M GCEPD Y+VL+
Sbjct: 331 AKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLIN 390
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV-- 348
+C+ ++ EA KL+ M DV Y ++ G + G++ A++ F M + G+
Sbjct: 391 GYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPG 450
Query: 349 ----------------------------ESSSV-----TFEHLVNGYCRAGDVDSAILVY 375
+S ++ F L++G C+AG +++A ++
Sbjct: 451 DLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELF 510
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
+ ++ +P+ T ++I E C +V +A +IL ++ K G P + +Y LI+G E
Sbjct: 511 EKLPQEELQPDVVTYNIMIHEFCRGGQVVKA-NILFQKMEKNGCTPDKITYATLIRGFFE 569
Query: 436 EGKMEEALKVQAEMV 450
K+E+ +++ MV
Sbjct: 570 SKKLEKVVELLHMMV 584
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 115/281 (40%), Gaps = 67/281 (23%)
Query: 160 VFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
F++LI C E K IE D++ +++ RG+ + T N+LI G ++
Sbjct: 314 TFNVLIDVLCKEGKVIEA----KDLLEVMIQRGIVPNLLTYNSLI----EGFCLVGDLNS 365
Query: 219 YREVF------GLDSDA------------TAGIGKDVKRV-----VRVRPNVHTFNALMV 255
RE+F G + D T+ + + +K V RP+V T+ AL+
Sbjct: 366 ARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLT 425
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV-- 313
G ++ G + ++ M G D Y Y + + C+ + EA +L+ +++ N+
Sbjct: 426 GLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKL 485
Query: 314 ---------------------------------EHDVVAYNTIIGGFCEIGEMARAEEFF 340
+ DVV YN +I FC G++ +A F
Sbjct: 486 DIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILF 545
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
++M +G +T+ L+ G+ + ++ + + + M ++
Sbjct: 546 QKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 586
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+V T+N ++ F R G K ++ +M + GC PD +Y+ L+ F E +++ +
Sbjct: 518 LQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVV 577
Query: 303 KLWEEMRDKNVEHDV 317
+L M ++V DV
Sbjct: 578 ELLHMMVQRDVSLDV 592
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 197/457 (43%), Gaps = 58/457 (12%)
Query: 39 HNLIATVVSLLTHHRSKSRWNHLLS-----LCRSGLTPTQFSQIALGLKNNPHLALRFFS 93
H L+ + L+ +S WNH L L R GL P + L +++ +AL FF
Sbjct: 17 HPLVREICRLI---ECRSAWNHKLEGKMRHLLR-GLKPRLVCAVLLS-QSDERVALDFFF 71
Query: 94 FTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVAL-----RSPENDPKLKLFEVLV 148
++ + +H Y ++ +LS+ +L AR V+R+ + R+P++ F ++
Sbjct: 72 WSDRQWRYRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQD------FCCVM 125
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+Y G K+ + ++ M+ G+ + CN I +
Sbjct: 126 VSYSRAG--------------------KLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVM 165
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVED 268
+ + +++ + PNV T+N L+ G+ E +
Sbjct: 166 ANMLEKALRFLERM----------------QLLGIMPNVVTYNCLIKGYCDLHRVEDAME 209
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
+ EM GC PD SY +M C+ RR+RE + E+M D + D V YNT+I C
Sbjct: 210 LISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLC 269
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ A +F RE G + V + +V+ YC+ G +D A + N+M +G P+
Sbjct: 270 KHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVV 329
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
T +I V +A +L+ ++ K G P SY +KGLC++G EA ++
Sbjct: 330 TYTAIINGFSQAGEVGQARKMLQ-QMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKA 388
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+ + P+ YS + G+ +EG + A + +EM
Sbjct: 389 SEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMI 425
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 115/240 (47%), Gaps = 1/240 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
++A++ + +EG ++ +++ EM GC PD +Y+ ++ F + + +A K+ ++M
Sbjct: 296 YSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMY 355
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ + V+Y + G C+ G + A E + +++T+ +++G+ R G +
Sbjct: 356 KHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLS 415
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A V +M KGF P I +L+ LC RV EA ++ + G ++ +
Sbjct: 416 DACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFME-ECLNMGCAVNAVNFTTV 474
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I C++ +E AL + +M P Y+ ID K+G +E AT L +M + +
Sbjct: 475 IHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGI 534
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 1/238 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F +MV + R G V M + G EP+ + + V + +A + E M+
Sbjct: 121 FCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQ 180
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ +VV YN +I G+C++ + A E EM L G V++ ++ C+ +
Sbjct: 181 LLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIR 240
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+ V M + T LI LC + EAL L+ K G + Y +
Sbjct: 241 EVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLR-EAQKRGFQVDKVGYSAI 299
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ C+EG+M++A ++ EM +G P + Y+A I+G+ + G V A + ++M+++
Sbjct: 300 VDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKH 357
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 1/244 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ A++ GF + G + + +M + GC+P+ SY+ + C++ EA ++
Sbjct: 326 PDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREM 385
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ ++ + + Y+ ++ GF G+++ A + REM G + V L+ CR
Sbjct: 386 MKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCR 445
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G VD A + G +I C + + AL +L + P
Sbjct: 446 IGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLS-NKHPDAV 504
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I L ++G++EEA ++ +M+ KG +P+ Y I Y + G VE L +M
Sbjct: 505 TYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKM 564
Query: 485 FENQ 488
Q
Sbjct: 565 LTRQ 568
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 3/228 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T++ +M GF REG DV EM G P ++L+ C R+ EA+K
Sbjct: 396 PNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKF 455
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EE + + V + T+I FC+ ++ A +M LS +VT+ +++ +
Sbjct: 456 MEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGK 515
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G ++ A + M +KG +P T +I RV + L++L + +
Sbjct: 516 KGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTR---QECRT 572
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
++ +I+ LC G +E A K+ +++ ++ Y+++G
Sbjct: 573 AFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKG 620
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 201/452 (44%), Gaps = 35/452 (7%)
Query: 69 LTPTQFSQIALGLK-NNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDV 127
+TP +I +GL+ NN L +RFF + +S + L ++ +L L G A+
Sbjct: 1 MTPHLAGKI-IGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKA 59
Query: 128 IRVALRSPENDPK--LKLFEVLVKTYRECG---SAPFVFDLLIKCCLEVKNIEKIETCVD 182
+ + ++ E+ +KL L E G S P LL+ CL N+ + V
Sbjct: 60 VVLLIQECEDSENGVVKLMGAL-DGMTELGFRLSYPCYSTLLM--CLAKLNMGFVAFLV- 115
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY-----REVFGLDSDATAGI---- 233
R +++ G + ++ + + G + E++ R FGLD+ +
Sbjct: 116 -YRRMVNEGFVLGGIDYRTVVNALCK-NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLAN 173
Query: 234 --GKDVKRVVRV----------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
D+ RV RPN T++ L+ G G E+ + EM GC+P
Sbjct: 174 CRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPS 233
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
+Y+VL+ C+ +A K+ +EM K +V Y +I C G++ A FR
Sbjct: 234 TRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFR 293
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
+M G+ +TF L+NGYC+ G V SA + + M + +P T L+ LC
Sbjct: 294 KMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVS 353
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ ++A +L+ RVV GL P +Y L+ G C+EG++ A + M G EP +
Sbjct: 354 KSYKAFLLLR-RVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTF 412
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+A IDG K G +E A + M + + ++
Sbjct: 413 TALIDGLCKLGRLEQANGILGSMVKKGISLDE 444
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 169/407 (41%), Gaps = 37/407 (9%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
A R F + C+ + +Y+ +IH L A + A ++ + P + + VL
Sbjct: 182 AFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQ-LKQEMVEKGCQPSTRTYTVL 240
Query: 148 VKTYRECGSAPFVFDLL----IKCCLEVKNIE-------------KIETCVDIVRMLMSR 190
+K + G +L K C V N+ KIE + R ++
Sbjct: 241 IKAKCDIGMTDKAMKMLDEMATKAC--VPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 298
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTF 250
GL + T NALI + V+S +++ V +PN+ T+
Sbjct: 299 GLCPGIITFNALINGYCKEGWVVSAFQLL----------------SVMEKGNCKPNIRTY 342
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
N LM G R K + + G PD +Y++L+ FC+E ++ A ++ M
Sbjct: 343 NELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 402
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
+E D + +I G C++G + +A M G+ VTF L++G+C+ G
Sbjct: 403 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKD 462
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
++ +M T + L ++ EA +L +++K+GL P+ ++ LI
Sbjct: 463 VCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAML-GKMMKYGLVPSVVTHTILI 521
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+G C G+ +LK+ M G P++ Y+ I+G G VE A
Sbjct: 522 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA 568
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 122/242 (50%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNVHT+ L+ REG E+ V+ +M + G P +++ L+ +C+E + A +L
Sbjct: 267 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 326
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M N + ++ YN ++ G C + + +A R + +G+ VT+ LV+G+C+
Sbjct: 327 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 386
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G ++ A ++N M G EP+G T LI LC R+ +A IL + +VK G+ E
Sbjct: 387 EGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGS-MVKKGISLDEV 445
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI G C+ GK ++ + MV + ++ F+D K+ + A + +M
Sbjct: 446 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 505
Query: 485 FE 486
+
Sbjct: 506 MK 507
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 187/478 (39%), Gaps = 77/478 (16%)
Query: 58 WNHLLS-LCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATII--HI 114
+N L++ C+ G + F +++ K N +R ++ + LC+ S S A ++ +
Sbjct: 307 FNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYN-ELMEGLCRVSKSYKAFLLLRRV 365
Query: 115 LSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVK 172
+ L P R + + + +L + + + G P F F LI ++
Sbjct: 366 VDNGLL--PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLG 423
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
+E+ I+ ++ +G+S+ T ALI D G
Sbjct: 424 RLEQAN---GILGSMVKKGISLDEVTFTALI----------------------DGHCKIG 458
Query: 233 IGKDVKRVV------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
KDV + R HTFN + ++ + + +M + G P +++
Sbjct: 459 KAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHT 518
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
+L+ C + K+ E M+ +V Y II G C G + AE M
Sbjct: 519 ILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSF 578
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI------------ 394
GV + T+ LV + +AG +D A + + M + G +P L+
Sbjct: 579 GVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGA 638
Query: 395 ------GEL-------------CDKRRVFEALDI---LKAR--VVKFGLFPTEKSYMFLI 430
G+L C VF +D+ LK R + K G+ PTE Y FL+
Sbjct: 639 RALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGV-PTEDLYNFLV 697
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
GLC+EG++ EA ++ +MV G P I S+ I+ Y K + K + +N+
Sbjct: 698 VGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNK 754
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 140/291 (48%), Gaps = 19/291 (6%)
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
L R +G+ S IYR L+S T +V +++ + G ++
Sbjct: 61 GLAVRTRRRRGIPSSLRIYRPKL-LNSQDT---------------DVISYSRKINGLCKK 104
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G + +++ EM G PD ++Y++L+ C++ ++ L +EM+ + VV Y
Sbjct: 105 GQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTY 164
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
T+I GFC G + A + EM G+ ++VT+ L+ G C G+V+ AILV +M
Sbjct: 165 TTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKL 224
Query: 381 KGFE--PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+G E P T LI LC K ++ L ++ G FP +Y LI GLC++G
Sbjct: 225 RGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIIS-GCFPNNATYTALIHGLCQKGS 283
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EA + EMV G E + IY++ IDG K G ++ A ++ M E V
Sbjct: 284 FLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGV 334
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 131/271 (48%), Gaps = 6/271 (2%)
Query: 222 VFGLDSDATAGIGKDVKRVVRVR---PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+ GL DA +G + ++ R P V T+ L+ GF G + D+ EM G
Sbjct: 133 INGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGI 192
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE--HDVVAYNTIIGGFCEIGEMARA 336
P+ +Y+ L+ C+ + A + +EM+ + E +VV Y +I G C+ G
Sbjct: 193 TPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMG 252
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
EF EM +SG ++ T+ L++G C+ G A ++ N+M G E + LI
Sbjct: 253 MEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDG 312
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC + A + ++ +V+ G+ P +Y LI+GLC+ G ++EAL + EM KG P
Sbjct: 313 LCKMGELDFARE-MQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVP 371
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ Y+ I+G+ + + A L EM N
Sbjct: 372 NSVTYTTLINGFTQADRTDHALQLVNEMKSN 402
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 117/259 (45%), Gaps = 17/259 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ +DI+ + RG++ T ALI +G+ E+ R + L K
Sbjct: 176 RVDAAMDILDEMEHRGITPNTVTYTALI------QGLCDCGEVERAILVL---------K 220
Query: 236 DVK-RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
++K R PNV T+ L+ G ++G FE + EM GC P+ +Y+ L+ C+
Sbjct: 221 EMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQ 280
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ EA L EM E DVV YN++I G C++GE+ A E M GV T
Sbjct: 281 KGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFT 340
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ G C AG +D A+ + +M KG P T LI R AL ++ +
Sbjct: 341 YTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVN-EM 399
Query: 415 VKFGLFPTEKSYMFLIKGL 433
GL P Y L K L
Sbjct: 400 KSNGLMPAGDIYKILFKSL 418
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 158/349 (45%), Gaps = 22/349 (6%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
D LK+ ++++ C + + +I C + N ++E IV ++ G +
Sbjct: 318 DHALKVLGLMLQ--EGCEPDVYTYSTVINC---LCNNGELEEAKGIVNQMVDSGCLPDTT 372
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T N LI + + ++ RE+ V + PNV+TFN L+
Sbjct: 373 TFNTLIVALCTENQLEEALDLAREL----------------TVKGLSPNVYTFNILINAL 416
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G ++ EM GC PD +Y++L+ C ++ +A L +EM
Sbjct: 417 CKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQST 476
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
V YNTII G C+ + AEE F +M ++G+ +++TF L++G C A +D A + +
Sbjct: 477 VTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQ 536
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
M +G +P T ++ C + + +A DIL+ G +Y LI GLC+
Sbjct: 537 MISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTAN-GFEVDVVTYATLINGLCKAR 595
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ + ALK+ M KG +P+ + Y+ I + N A L +EM E
Sbjct: 596 RTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTE 644
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 173/404 (42%), Gaps = 47/404 (11%)
Query: 74 FSQIALGLKNNPHL--ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVA 131
FS GL N H+ AL+ + C+ + +Y+T+I+ L
Sbjct: 304 FSTFVNGLCQNGHVDHALKVLGLMLQEG-CEPDVYTYSTVINCLC--------------- 347
Query: 132 LRSPENDPKLKLFEVLVKTYRECGSAP--FVFD-LLIKCCLEVKNIEKIETCVDIVRMLM 188
N+ +L+ + +V + G P F+ L++ C E ++E +D+ R L
Sbjct: 348 -----NNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTE----NQLEEALDLARELT 398
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVH 248
+GLS V T N LI + + ++ E+ + P+
Sbjct: 399 VKGLSPNVYTFNILINALCKVGDPHLAVRLFEEM----------------KSSGCTPDEV 442
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N L+ G K D+ EM GC +Y+ ++ C+ RR+ EAE+++++M
Sbjct: 443 TYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQM 502
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + + +NT+I G C + A E +M G++ ++VT+ ++ YC+ G++
Sbjct: 503 DVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNI 562
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A + M GFE + T LI LC RR AL +L+ +K G+ PT K+Y
Sbjct: 563 SKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMK-GMKPTPKAYNP 621
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+I+ L +AL + EM G P Y G + G
Sbjct: 622 VIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGG 665
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 122/243 (50%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V+T++ ++ G E+ + + +M GC PD +++ L+ C E ++ EA L
Sbjct: 334 PDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDL 393
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+ K + +V +N +I C++G+ A F EM SG VT+ L++ C
Sbjct: 394 ARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCS 453
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G + A+ + +M G T +I LC +RR+ EA ++ V G+
Sbjct: 454 SGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVT-GIGRNAI 512
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI GLC ++++A ++ +M+ +G +P+ Y++ + Y K+GN+ A + + M
Sbjct: 513 TFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTM 572
Query: 485 FEN 487
N
Sbjct: 573 TAN 575
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 133/298 (44%), Gaps = 17/298 (5%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+ S+G+ V T N +I + R + + + E+ D V P+
Sbjct: 187 MSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCD----------------VAPD 230
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
TF LM GF EG+ E + M+ +GC P + +VL+ +C+ R+ +A +
Sbjct: 231 ETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQ 290
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+ E D V ++T + G C+ G + A + M G E T+ ++N C G
Sbjct: 291 QEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNG 350
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
+++ A + N M G P+ +T LI LC + ++ EALD+ + VK GL P ++
Sbjct: 351 ELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVK-GLSPNVYTF 409
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LI LC+ G A+++ EM G P Y+ ID G + A L KEM
Sbjct: 410 NILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEM 467
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ TF+ + G + G + V M + GCEPD Y+YS ++ C + EA+ +
Sbjct: 299 PDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGI 358
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M D D +NT+I C ++ A + RE+ + G+ + TF L+N C+
Sbjct: 359 VNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCK 418
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GD A+ ++ +M G P+ T +LI LC ++ +ALD+LK V G +
Sbjct: 419 VGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVS-GCPQSTV 477
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I GLC+ ++EEA +V +M G + ++ IDG ++ A L +M
Sbjct: 478 TYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQM 537
Query: 485 F 485
Sbjct: 538 I 538
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 110/242 (45%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+ N +N L+ + +E + EM+ G EPD +++ ++ C R+ R A
Sbjct: 157 VQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAV 216
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EEM +V D + T++ GF E G + A M G +SVT L+NGY
Sbjct: 217 LMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGY 276
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G V A+ GFEP+ T + LC V AL +L +++ G P
Sbjct: 277 CKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVL-GLMLQEGCEPD 335
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I LC G++EEA + +MV G P ++ I E +E A L +
Sbjct: 336 VYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAR 395
Query: 483 EM 484
E+
Sbjct: 396 EL 397
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 4/228 (1%)
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
+ AF+ V + ++ G + + Y+ L+ V E +++ E + EM + +E DVV
Sbjct: 142 DDAFDLVSN---QLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVT 198
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+NT+I C + A EM V TF L+ G+ G +++A+ + M
Sbjct: 199 FNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMS 258
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
G P T+ VLI C RV +AL ++ + G P ++ + GLC+ G +
Sbjct: 259 EMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIAD-GFEPDRVTFSTFVNGLCQNGHV 317
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ ALKV M+ +G EP + YS I+ G +E A + +M ++
Sbjct: 318 DHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDS 365
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 138/316 (43%), Gaps = 26/316 (8%)
Query: 138 DPKL--KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
DP L +LFE + + C +++LI + + K+ +D+++ + G
Sbjct: 421 DPHLAVRLFEEMKSS--GCTPDEVTYNILID---NLCSSGKLAKALDLLKEMEVSGCPQS 475
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
T N +I + + + + E++ ++ D T GIG+ N TFN L+
Sbjct: 476 TVTYNTIIDGLCKRRRIEEAEEVFDQM-----DVT-GIGR----------NAITFNTLID 519
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G + ++ +M G +P+ +Y+ ++ +C++ + +A + + M E
Sbjct: 520 GLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEV 579
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
DVV Y T+I G C+ A + R M + G++ + + ++ R + A+ ++
Sbjct: 580 DVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLF 639
Query: 376 NDMCRKGFEPEGSTIEVLIGELC-DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
+M G P+ T +++ LC + EA D L + G P S+ L +GL
Sbjct: 640 REMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFL-VEMADNGFIPEFSSFRMLAEGLL 698
Query: 435 EEGKMEEALKVQAEMV 450
G M++ L E++
Sbjct: 699 NLG-MDDYLIRAIELI 713
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 60/138 (43%)
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+ S +E ++ AG D ++ +M R+G E ++ IG + +A
Sbjct: 85 GLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDA 144
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
D++ ++ FG+ + Y L+ L E K++ EM +G EP + ++ ID
Sbjct: 145 FDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVID 204
Query: 467 GYMKEGNVEMATMLRKEM 484
+ A ++ +EM
Sbjct: 205 ALCRARQARTAVLMLEEM 222
>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 208/456 (45%), Gaps = 52/456 (11%)
Query: 53 RSKSRWNH-LLSLCRSG--LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYA 109
R++ RW LLS S L PT S KN ++LRFF + +S S +
Sbjct: 106 RTRPRWEQTLLSDFPSFNFLDPTFLSHFVEHQKN-ALISLRFFHWLSSQS----GFSPDS 160
Query: 110 TIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCL 169
+ ++L A + A + + L S +PK P + I+C
Sbjct: 161 SSCNVLFDALVEAGACNAAKSFLDSTNFNPK-----------------PASLEAYIRCLC 203
Query: 170 EVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDA 229
+ +E+ + + L G+ ++T N+++ R + +E+Y E+ ++S
Sbjct: 204 KGGLVEE---AISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEM--VESSV 258
Query: 230 TAGI------------------GKDVKRVV---RVRPNVHTFNALMVGFYREGAFEKVED 268
A + G ++ R V V P FN L+ GF ++ A+ +V D
Sbjct: 259 VADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSD 318
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
+ M PD ++Y ++ C+ + E +++++++D+ D V Y T+I G C
Sbjct: 319 LLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLC 378
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ + A + + EM G + T+ +++GY + G+++ A +Y +MC KG+ +
Sbjct: 379 RMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTV 438
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
+ V+I LC ++ EA D+ + K G+ +Y L++G C+EGK+ E + E
Sbjct: 439 SYNVMIKGLCSHGKIKEAHDLFEEMSHK-GILRNHITYNALVRGFCKEGKIVEGANLLYE 497
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ +G +PS Y+ ID +EG+++ A +L +M
Sbjct: 498 LLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDM 533
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 123/221 (55%), Gaps = 1/221 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +T+NA++ G+++ G E+ ++ EM G SY+V++ C +++EA L
Sbjct: 400 PNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDL 459
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EEM K + + + YN ++ GFC+ G++ E+ G++ S+ ++ L++ C+
Sbjct: 460 FEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQ 519
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GD+ +A ++++DM +G EP T + +I C + E ++ L +++ L P +K
Sbjct: 520 EGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTT-MLRSKLRPQKK 578
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
S+ LI+ L + ++++AL V M+ GF S+ I ++ +
Sbjct: 579 SFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLV 619
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 110/222 (49%), Gaps = 3/222 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + ++ G R +W EM + G P+ Y+Y+ ++ + + + EA K+
Sbjct: 365 PDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKM 424
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM DK V+YN +I G C G++ A + F EM G+ + +T+ LV G+C+
Sbjct: 425 YREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCK 484
Query: 365 AGD-VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G V+ A L+Y ++ +G +P ++ LI +LC + + A IL + G+ P
Sbjct: 485 EGKIVEGANLLY-ELLDQGIQPSAASYAPLIDKLCQEGDMQNA-KILWDDMQNRGMEPAV 542
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
++ F+I G C++G E ++ M+ P + + + I
Sbjct: 543 CTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLI 584
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 139/304 (45%), Gaps = 41/304 (13%)
Query: 108 YATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKC 167
Y T+IH L R + +G AR + FE++ K + + ++ +I
Sbjct: 370 YTTMIHGLCRMKWLGDARKL---------------WFEMIQKGFL---PNEYTYNAMIHG 411
Query: 168 CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDS 227
++ N+E+ + R + +G K + N +I + + ++++ E+
Sbjct: 412 YFKIGNLEE---AWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEM----- 463
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
K ++R N T+NAL+ GF +EG + ++ E+ G +P SY+
Sbjct: 464 --------SHKGILR---NHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAP 512
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ C+E M+ A+ LW++M+++ +E V ++ +I GFC+ G E+ M S
Sbjct: 513 LIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSK 572
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ +FE L+ + +D A+LV + M + GF S L+ +LC+K +L
Sbjct: 573 LRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLVTKLCEK----NSL 628
Query: 408 DILK 411
ILK
Sbjct: 629 PILK 632
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 163/348 (46%), Gaps = 23/348 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+ F ++IK C EV ++K +++ + GLS V LI + + G ++
Sbjct: 152 YSFGIMIKGCCEVGYLDK---GFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQL 208
Query: 219 YREVFGLDSDATA-------------GIGKD------VKRVVRVRPNVHTFNALMVGFYR 259
+ ++ LD A G+ KD ++ + PNV+T+N+++
Sbjct: 209 FYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCN 268
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
+G +++ EM G + +Y+ L+ C+ERR+ EAE+L M+ + ++++
Sbjct: 269 DGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLIS 328
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YNT+I G+C IG + +A F +M SG S T+ L+ G+ A + + +M
Sbjct: 329 YNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREME 388
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+G P T +L+ L + +A I + + K GL Y LI GLC G M
Sbjct: 389 ARGLSPSKVTYTILMDALVRSDNIEKAFQIYSS-MEKAGLVADIYIYGVLIHGLCVVGDM 447
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+EA K+ + +P+ IY+ I GY KEG+ A L KEM EN
Sbjct: 448 KEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGEN 495
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 122/243 (50%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
V+ +V++F ++ G G +K +V +M +G P+ Y+ L+ C+ +
Sbjct: 146 NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERG 205
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++L+ +M + +V + Y +I GF ++G E + +M L+G+ + T+ ++
Sbjct: 206 KQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICR 265
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C G +++A ++++M +G T LIG LC +RRV EA + L R+ + GL P
Sbjct: 266 CCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEA-ERLMCRMKRDGLSP 324
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
SY LI G C G +++A + +M G PSL Y+ I G+ + N T +
Sbjct: 325 NLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMV 384
Query: 482 KEM 484
+EM
Sbjct: 385 REM 387
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ GF V D+ EM G P +Y++LM + +A ++
Sbjct: 359 PSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQI 418
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + D+ Y +I G C +G+M A + F+ + ++ + V + ++ GYC+
Sbjct: 419 YSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCK 478
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G A+ + +M G P ++ I LC + EA ++L +++ GL P+
Sbjct: 479 EGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEA-EVLLKDMIELGLKPS 535
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 24/198 (12%)
Query: 147 LVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
L + G +P + +++LI E KN + D+VR + +RGLS T L+
Sbjct: 348 LFNQMKSSGQSPSLATYNILIAGFSEAKNSAGV---TDMVREMEARGLSPSKVTYTILMD 404
Query: 205 EVSRGKGVISGYEIYR--EVFGLDSD-----------ATAGIGKDVKRVVR------VRP 245
+ R + ++IY E GL +D G K+ ++ + ++P
Sbjct: 405 ALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKP 464
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +N ++ G+ +EG+ + + EM G P+ SY+ + + C++ + EAE L
Sbjct: 465 NDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLL 524
Query: 306 EEMRDKNVEHDVVAYNTI 323
++M + ++ + +N I
Sbjct: 525 KDMIELGLKPSISIWNMI 542
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 214/495 (43%), Gaps = 69/495 (13%)
Query: 28 TSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHL 87
T S PP +A + L+ K W+ L + + + P + + + + +P L
Sbjct: 33 TGSPCPPRYD----VAVIADLI----EKQHWSKL-GVHVTDINPNELFRQLISSELDPDL 83
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
LR++S+ S SL ++H L+ A+ R + +R+ + +F +
Sbjct: 84 CLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAI 143
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
C ++ + D+L+ L N + E + + G + +C L+ +
Sbjct: 144 SMCDNVCVNS-IIADMLV---LAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALL 199
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
+ +Y+E+ ++R +++PNV TFN ++ + G K
Sbjct: 200 KENRSADVEYVYKEM--------------IRR--KIQPNVFTFNVVINALCKTGKMNKAR 243
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCE---ERRMREAE---------------------- 302
DV +M GC P+ SY+ L+ +C+ +M +A+
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303
Query: 303 -------------KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
K+++EM D++V+ +V++YN++I G C G+++ A +M +GV+
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
+ +T+ L+NG+C+ + A+ ++ + +G P +LI C ++ +
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF-A 422
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
LK + + G+ P +Y LI GLC G +E A K+ ++ KG P L + ++GY
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYC 481
Query: 470 KEGNVEMATMLRKEM 484
++G A ML KEM
Sbjct: 482 RKGESRKAAMLLKEM 496
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 123/242 (50%), Gaps = 2/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN+ TFN L+ GF+++ V+ EM +P+ SY+ L+ C ++ EA
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ ++M V+ +++ YN +I GFC+ + A + F + G ++ + L++ Y
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G +D + +M R+G P+ T LI LC + EA L ++ GL P
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI-EAAKKLFDQLTSKGL-PD 469
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ L++G C +G+ +A + EM G +P Y+ + GY KEGN++ AT +R
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRT 529
Query: 483 EM 484
+M
Sbjct: 530 QM 531
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 160/363 (44%), Gaps = 39/363 (10%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND--PKLKLFEVLVKTYRECGSAP 158
C ++ SY T+I + G V END P L F +L+ + + + P
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+ + + ++ + + V + N+LI G+ +G +I
Sbjct: 314 --------------------GSMKVFKEMLDQDVKPNVISYNSLI------NGLCNGGKI 347
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+ D +AG V+PN+ T+NAL+ GF + ++ D++ + G
Sbjct: 348 SEAISMRDKMVSAG----------VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P Y++L+ +C+ ++ + L EEM + + DV YN +I G C G + A++
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F ++ G+ VTF L+ GYCR G+ A ++ +M + G +P T +++ C
Sbjct: 458 LFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ + A ++ + L SY L++G ++GK+E+A + EM+ KG P+
Sbjct: 517 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576
Query: 459 EIY 461
Y
Sbjct: 577 ITY 579
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
E F+ G G + S+++ + L+ + VY +M R+ +P T V+I L
Sbjct: 174 EAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINAL 233
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE---EGKMEEALKVQAEMVGKGF 454
C ++ +A D+++ V +G P SY LI G C+ GKM +A V EMV
Sbjct: 234 CKTGKMNKARDVMEDMKV-YGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDV 292
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
P+L ++ IDG+ K+ N+ + + KEM + V+
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 163/348 (46%), Gaps = 23/348 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+ F ++IK C EV ++K +++ + GLS V LI + + G ++
Sbjct: 165 YSFGIMIKGCCEVGYLDK---GFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQL 221
Query: 219 YREVFGLDSDATA-------------GIGKD------VKRVVRVRPNVHTFNALMVGFYR 259
+ ++ LD A G+ KD ++ + PNV+T+N+++
Sbjct: 222 FYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCN 281
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
+G +++ EM G + +Y+ L+ C+ERR+ EAE+L M+ + ++++
Sbjct: 282 DGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLIS 341
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YNT+I G+C IG + +A F +M SG S T+ L+ G+ A + + +M
Sbjct: 342 YNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREME 401
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+G P T +L+ L + +A I + + K GL Y LI GLC G M
Sbjct: 402 ARGLSPSKVTYTILMDALVRSDNIEKAFQIYSS-MEKAGLVADIYIYGVLIHGLCVVGDM 460
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+EA K+ + +P+ IY+ I GY KEG+ A L KEM EN
Sbjct: 461 KEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGEN 508
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 122/243 (50%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
V+ +V++F ++ G G +K +V +M +G P+ Y+ L+ C+ +
Sbjct: 159 NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERG 218
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++L+ +M + +V + Y +I GF ++G E + +M L+G+ + T+ ++
Sbjct: 219 KQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICR 278
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C G +++A ++++M +G T LIG LC +RRV EA + L R+ + GL P
Sbjct: 279 CCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEA-ERLMCRMKRDGLSP 337
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
SY LI G C G +++A + +M G PSL Y+ I G+ + N T +
Sbjct: 338 NLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMV 397
Query: 482 KEM 484
+EM
Sbjct: 398 REM 400
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N L+ GF V D+ EM G P +Y++LM + +A ++
Sbjct: 372 PSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQI 431
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + D+ Y +I G C +G+M A + F+ + ++ + V + ++ GYC+
Sbjct: 432 YSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCK 491
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G A+ + +M G P ++ I LC + EA ++L +++ GL P+
Sbjct: 492 EGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEA-EVLLKDMIELGLKPS 548
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 24/198 (12%)
Query: 147 LVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
L + G +P + +++LI E KN + D+VR + +RGLS T L+
Sbjct: 361 LFNQMKSSGQSPSLATYNILIAGFSEAKNSAGV---TDMVREMEARGLSPSKVTYTILMD 417
Query: 205 EVSRGKGVISGYEIYR--EVFGLDSD-----------ATAGIGKDVKRVVR------VRP 245
+ R + ++IY E GL +D G K+ ++ + ++P
Sbjct: 418 ALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKP 477
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +N ++ G+ +EG+ + + EM G P+ SY+ + + C++ + EAE L
Sbjct: 478 NDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLL 537
Query: 306 EEMRDKNVEHDVVAYNTI 323
++M + ++ + +N I
Sbjct: 538 KDMIELGLKPSISIWNMI 555
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 131/252 (51%), Gaps = 1/252 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV T+N+LM G+ + + ++ M GC+PD +SYS+L+ +C +R+ EA+
Sbjct: 332 VEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAK 391
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ EM + + + V+Y T+I FC++G++ A E F++M +G T+ L+ G+
Sbjct: 392 QLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGF 451
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G + A ++ M +P +LI +C + A + V GL P
Sbjct: 452 CKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVH-GLQPD 510
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ Y +I GLC+EG ++EAL+ +M G P+ Y+ I G+++ + A L
Sbjct: 511 VQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIG 570
Query: 483 EMFENQVRQEDG 494
EM + ++G
Sbjct: 571 EMRDKGFVADEG 582
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 161/311 (51%), Gaps = 17/311 (5%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+ +DI + ++G+S V + +LI +G+ S + ++E + ++ T+
Sbjct: 247 VNEALDIFSYMKAKGISPTVVSYTSLI------QGLCS-FSRWKEASAMLNEMTS----- 294
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
+ + P++ TF+ L+ F +EG + + V M +G EP+ +Y+ LM + +
Sbjct: 295 ----LNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQM 350
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ EA KL++ M + + DV +Y+ +I G+C + + A++ F EM G+ ++V++
Sbjct: 351 EVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYT 410
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L++ +C+ G + A ++ DM G+ P+ T VL+ C + + +A + +A
Sbjct: 411 TLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGT 470
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
+ L P Y LI +C+ G + A K+ +E+ G +P ++IY+ I+G KEG ++
Sbjct: 471 Y-LKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDE 529
Query: 477 ATMLRKEMFEN 487
A ++M E+
Sbjct: 530 ALEAFRKMEED 540
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 133/294 (45%), Gaps = 17/294 (5%)
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTF 250
GLS T N LI + V G+ + +V L ++P + TF
Sbjct: 121 GLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLG----------------LQPTIITF 164
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
L+ G + G F + +++ +M GC+PD Y+Y+ ++ C+ A L ++M +
Sbjct: 165 TTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGE 224
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
+ DVV Y+T+I C+ + A + F M G+ + V++ L+ G C
Sbjct: 225 VGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKE 284
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A + N+M P+ T +LI C + V EA +LK + + G+ P +Y L+
Sbjct: 285 ASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKT-MTEMGVEPNVITYNSLM 343
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G + ++ EA K+ M+ +G +P + YS I+GY ++ A L EM
Sbjct: 344 HGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEM 397
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 115/249 (46%), Gaps = 22/249 (8%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
KLF+V++ R C F + +LI VK I++ + + ++ +GL+ +
Sbjct: 357 KLFDVMIT--RGCKPDVFSYSILINGYCMVKRIDEAK---QLFNEMIHQGLTPNTVSYTT 411
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
LI + + E+++++ T G P++ T++ L+ GF ++G
Sbjct: 412 LIHAFCQLGKLREARELFKDMH------TNG----------YLPDLCTYSVLLEGFCKQG 455
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
K ++ M +P+ Y++L+ C+ + A KL+ E+ ++ DV Y
Sbjct: 456 YLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYT 515
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
TII G C+ G + A E FR+M G + ++ ++ G+ + D A+ + +M K
Sbjct: 516 TIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDK 575
Query: 382 GF-EPEGST 389
GF EG+T
Sbjct: 576 GFVADEGTT 584
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D+ I + M G P T+ +LI C + V +L A+V+K GL PT ++
Sbjct: 108 DAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVL-AKVIKLGLQPTIITFTT 166
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI GLC+ G+ +AL++ +MV +G +P + Y+ I+G K G A L K+M E
Sbjct: 167 LINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGE 224
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 159/325 (48%), Gaps = 28/325 (8%)
Query: 181 VDIVRMLMSR-GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG-------------LD 226
++I R M+R G++ + T N +I + + + +G E++ E+ +D
Sbjct: 21 LEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLID 80
Query: 227 SDATAGIGKDVKRV---VRVR---PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE- 279
S AG ++ +R+ + R PNV T++ L+ G + G ++ ++ EM R C+
Sbjct: 81 SLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDV 140
Query: 280 -PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN--VEHDVVAYNTIIGGFCEIGEMARA 336
P+ +Y+ + C++ EA +L +RD + V D V ++T+I G C+ G++ A
Sbjct: 141 LPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEA 200
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
F +M G + +T+ LVNG C+A ++ A + M KG P+ T VL+
Sbjct: 201 CSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDA 260
Query: 397 LCDKRRVFEALDILKARVVKFG----LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
C RV EAL++L + L P + ++ LI G C+ G E+A + EMV K
Sbjct: 261 FCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 320
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMA 477
+P + + A IDG K G VE A
Sbjct: 321 NLQPDVMTFGALIDGLCKAGQVEAA 345
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 121/245 (49%), Gaps = 6/245 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+NAL+ G + E+ + M G PD +YSVL+ FC+ R+ EA +L
Sbjct: 214 PNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 273
Query: 305 WEEMRDKNVEHDV-----VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
M + +V V +N +I G C+ G +A F EM ++ +TF L+
Sbjct: 274 LHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALI 333
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+G C+AG V++A + + M G P T L+ LC R+ EA L+ +V G
Sbjct: 334 DGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE-EMVSSGC 392
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y L+ LC + ++AL++ +E+ G++P Y+ +DG K G E A
Sbjct: 393 VPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAIT 452
Query: 480 LRKEM 484
+ +EM
Sbjct: 453 VLEEM 457
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 125/250 (50%), Gaps = 4/250 (1%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVW-VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
V +N ++ R G + +++ EMAR G P +Y+ ++ C+ + +L+
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EE+ ++ DVV YNT+I C+ G++ A +M G + VT+ L+NG C+
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 366 GDVDSAILVYNDMCRKGFE--PEGSTIEVLIGELCDKRRVFEALDILKA-RVVKFGLFPT 422
G +D A + +M RK + P T + LC + EA +++++ R + P
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ LI GLC+ G+++EA V +M+ G+ P++ Y+A ++G K +E A + +
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240
Query: 483 EMFENQVRQE 492
M + V +
Sbjct: 241 SMVDKGVTPD 250
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 164/386 (42%), Gaps = 67/386 (17%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALR--SPENDPKLKLFEVLVKTYRECGS---APFVF 161
+Y + + L + + A +++R +LR S P F L+ +CG A VF
Sbjct: 146 TYNSFLDGLCKQSMTAEACELMR-SLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVF 204
Query: 162 DLLIKCCLEVKNI-------------EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
D +I V N+ +K+E ++ ++ +G++ V T + L+ +
Sbjct: 205 DDMIAGGY-VPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCK 263
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVED 268
V E+ L A+ G +V + P+ TFN L+ G + G FE+
Sbjct: 264 ASRVDEALEL------LHGMASRGCTPNV-----LVPDKVTFNILIAGACKAGNFEQASA 312
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
++ EM +PD ++ L+ C+ ++ A + + M + V +VV YN ++ G C
Sbjct: 313 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLC 372
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ G + A +F EM SG S+T+ LV CRA D A+ + +++ G++P+
Sbjct: 373 KSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTV 432
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
T Y L+ GL + GK E+A+ V E
Sbjct: 433 T------------------------------------YNILVDGLWKSGKTEQAITVLEE 456
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNV 474
MVGKG +P ++A G + GN+
Sbjct: 457 MVGKGHQPDSFTFAACFSGLHRSGNL 482
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 167/380 (43%), Gaps = 38/380 (10%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+Y T +H L + + A V+ + L+ +DP + F ++ +I
Sbjct: 302 TYNTFVHCLCQNGHVSHALKVMDLMLQEG-HDPDV-----------------FTYNTVIN 343
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
C KN E ++ IV ++ RG +T N LI + + ++ RE+
Sbjct: 344 CL--SKNGE-LDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAREL---- 396
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
V + P+V+TFN L+ + G ++ EM GC PD +Y+
Sbjct: 397 ------------TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYN 444
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
+L+ C ++ A L +EM V YNTII C+ + AEE F +M
Sbjct: 445 ILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAH 504
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+ S+VTF L++G C+A +D A + M ++G +P T ++ C + + +A
Sbjct: 505 GISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKA 564
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
DIL+ G +Y LI GLC+ G+ + ALK+ M KG P+ + Y+ I
Sbjct: 565 ADILETMTAN-GFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQ 623
Query: 467 GYMKEGNVEMATMLRKEMFE 486
+ N+ A L +EM E
Sbjct: 624 SLFRRNNLRDALSLFREMTE 643
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 145/328 (44%), Gaps = 20/328 (6%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
V++ L+ E ++ +E+ + + RG+ V T N LI + R V + +
Sbjct: 162 VYNHLLNVLAEGSRMKLLES---VYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLML 218
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
E + S A A P+ TF LM GF EG+ E V +M GC
Sbjct: 219 EE---MSSHAVA-------------PDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCS 262
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P + +VL+ +C+ R+ +A ++ E D V YNT + C+ G ++ A +
Sbjct: 263 PTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKV 322
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
M G + T+ ++N + G++D A + N M +G P+ +T LI LC
Sbjct: 323 MDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCS 382
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+ R+ EALD+ + VK GL P ++ LI LC+ G +++ EM G P
Sbjct: 383 QNRLEEALDLARELTVK-GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEV 441
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFEN 487
Y+ ID G + A L KEM N
Sbjct: 442 TYNILIDHLCSMGKLVNALDLLKEMESN 469
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 124/243 (51%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N ++ + G ++ + + +M GC PD +++ L+ C + R+ EA L
Sbjct: 333 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDL 392
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+ K + DV +N +I C++G+ F EM SG VT+ L++ C
Sbjct: 393 ARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCS 452
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + +A+ + +M G T +I LC + R+ EA ++ ++ G+ +
Sbjct: 453 MGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFD-QMDAHGISRSAV 511
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI GLC+ ++++A ++ +MV +G +PS Y++ + Y K+G+++ A + + M
Sbjct: 512 TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETM 571
Query: 485 FEN 487
N
Sbjct: 572 TAN 574
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 1/223 (0%)
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
+ V+ V ++ G + D Y+ L+ V E RM+ E ++ EM D+ ++ DVV NT+
Sbjct: 142 DAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTL 201
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I C ++ A EM V TF L+ G+ G +++A+ V M G
Sbjct: 202 IKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGC 261
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
P T+ VLI C RV +AL ++ + G P + +Y + LC+ G + AL
Sbjct: 262 SPTRVTVNVLINGYCKMGRVEDALGYIQKEIAD-GFEPDQVTYNTFVHCLCQNGHVSHAL 320
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
KV M+ +G +P + Y+ I+ K G ++ A + +M +
Sbjct: 321 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVD 363
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 113/276 (40%), Gaps = 34/276 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+ + +N L+ + +E V+ EM G +PD + + L+ C ++R A
Sbjct: 156 VQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAV 215
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EEM V D + T++ GF E G + A +M +G + VT L+NGY
Sbjct: 216 LMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGY 275
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK----------- 411
C+ G V+ A+ GFEP+ T + LC V AL ++
Sbjct: 276 CKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDV 335
Query: 412 -----------------------ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
++V G P ++ LI LC + ++EEAL + E
Sbjct: 336 FTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARE 395
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ KG P + ++ I+ K G+ + L +EM
Sbjct: 396 LTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM 431
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 151/365 (41%), Gaps = 45/365 (12%)
Query: 34 PSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFS----QIALGLKNNPHLAL 89
P + N + +V+L + +R + + L GL+P ++ AL +PHL +
Sbjct: 368 PDTTTFNTL--IVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 425
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVK 149
R F + ++ I H+ S +L+ A D+ L+ E++
Sbjct: 426 RLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVN-ALDL----LKEMESNG---------- 470
Query: 150 TYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG 209
C + ++ +I + IE+ E D + + G+S T N LI + +
Sbjct: 471 ----CPRSTVTYNTIIDALCKQMRIEEAEEVFD---QMDAHGISRSAVTFNTLIDGLCKA 523
Query: 210 KGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDV 269
K + DAT I + VK ++P+ T+N+++ + ++G +K D+
Sbjct: 524 KRI--------------DDATELIEQMVKE--GLQPSNITYNSILTHYCKQGDLKKAADI 567
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
M G E D +Y L+ C+ R + A KL MR K + AYN +I
Sbjct: 568 LETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFR 627
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD-VDSAILVYNDMCRKGFEPEGS 388
+ A FREM G ++T++ + G CR G + A +M KGF PE S
Sbjct: 628 RNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFS 687
Query: 389 TIEVL 393
+ +L
Sbjct: 688 SFRML 692
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 77/194 (39%), Gaps = 37/194 (19%)
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI------- 372
Y II G E REM G E+ + V Y R D A+
Sbjct: 92 YEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQL 151
Query: 373 -----------------------------LVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
VYN+M +G +P+ T+ LI LC +V
Sbjct: 152 NTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQV 211
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
A+ +L+ + + P E ++ L++G EEG +E AL+V+ +M+ G P+ +
Sbjct: 212 RTAVLMLE-EMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNV 270
Query: 464 FIDGYMKEGNVEMA 477
I+GY K G VE A
Sbjct: 271 LINGYCKMGRVEDA 284
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 61/143 (42%)
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
S +E ++ AG D + +M R+G E + + RR +A+D++
Sbjct: 88 SRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLV 147
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ ++ FG+ Y L+ L E +M+ V EM +G +P + + I +
Sbjct: 148 RNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCR 207
Query: 471 EGNVEMATMLRKEMFENQVRQED 493
V A ++ +EM + V ++
Sbjct: 208 AHQVRTAVLMLEEMSSHAVAPDE 230
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 132/277 (47%), Gaps = 34/277 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN HT++ LM GF+++G + ++ M R G P+ Y+Y+ L++ +C + + +A K+
Sbjct: 226 PNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKV 285
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EMR+K + V+ YN +IGG C + A + ++ G+ + VT+ L+NG+C
Sbjct: 286 FAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCD 345
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK------------- 411
+DSA+ ++N + G P T LI + ALD++K
Sbjct: 346 VRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVT 405
Query: 412 --------ARVV-------------KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
AR+ K GL P +Y L+ GLC G M+EA K+ +
Sbjct: 406 YTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLG 465
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+P+ IY+ I GY KEG+ A L EM ++
Sbjct: 466 EMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQS 502
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 188/420 (44%), Gaps = 29/420 (6%)
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATII-HILSRARLIGPARDVIR-VALRSPENDPKLK 142
P AL F+ ++ L +H+ S + I+ H+LS L ++R ++ R P +
Sbjct: 19 PTKALLLFNTATYQGL-QHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSS----L 73
Query: 143 LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
+ ++ + C + ++D ++ + + ++ T + ++ G +T N L
Sbjct: 74 MLQLTQAHFTPCSTYTPLYDTVVNAYVHSHSTDQALT---FLHHMIHEGHVPLSNTFNNL 130
Query: 203 IWEVSRGKGVISGYEIYREV----------FGLDSDATAGIGKDVK--RVVR------VR 244
+ + R + I+ E+ FG+ G VK R++ +
Sbjct: 131 LCLLIRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLS 190
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV + L+ G ++G ++++ +M RLG P+ ++YSVLM F ++ RE ++
Sbjct: 191 PNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E M+ + + AYN +I +C G + +A + F EM G+ +T+ L+ G CR
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A+ + + + + G P T +LI CD R++ A+ + ++ GL PT
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFN-QLKSSGLSPTLV 369
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G + + AL + EM + PS Y+ ID + + + E A + M
Sbjct: 370 TYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLM 429
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 119/245 (48%), Gaps = 1/245 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+V + ++F ++ G G F K + + G P+ Y+ L+ C++ + A
Sbjct: 153 KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLA 212
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ L+ +M + + Y+ ++ GF + G + + M SG+ ++ + L++
Sbjct: 213 KNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISE 272
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC G VD A V+ +M KG T +LIG LC ++ EA+ ++ +V K GL P
Sbjct: 273 YCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVH-KVNKVGLSP 331
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI G C+ KM+ A+++ ++ G P+L Y+ I GY K N+ A L
Sbjct: 332 NIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391
Query: 482 KEMFE 486
KEM E
Sbjct: 392 KEMEE 396
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 125/244 (51%), Gaps = 1/244 (0%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T+N L+ G R F + + ++ ++G P+ +Y++L+ FC+ R+M A +L+
Sbjct: 298 VMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFN 357
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+++ + +V YNT+I G+ ++ +A A + +EM + S VT+ L++ + R
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLN 417
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
+ A +++ M + G P+ T VL+ LC + EA + K+ + + L P Y
Sbjct: 418 HTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKS-LGEMHLQPNSVIY 476
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+I G C+EG AL++ EMV G P++ + + I ++ + A +L +M
Sbjct: 477 NTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMIN 536
Query: 487 NQVR 490
+ ++
Sbjct: 537 SGLK 540
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 147 LVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
LV + G +P + +++LI +V+ K+++ V + L S GLS + T N LI
Sbjct: 320 LVHKVNKVGLSPNIVTYNILINGFCDVR---KMDSAVRLFNQLKSSGLSPTLVTYNTLIA 376
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
S+ + + ++ +E+ +R + P+ T+ L+ F R E
Sbjct: 377 GYSKVENLAGALDLVKEM--------------EERCIA--PSKVTYTILIDAFARLNHTE 420
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
K ++ M + G PD Y+YSVL+ C M+EA KL++ + + +++ + V YNT+I
Sbjct: 421 KACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMI 480
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G+C+ G RA EM SG+ + +F + CR A L+ M G +
Sbjct: 481 HGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLK 540
Query: 385 PEGS 388
P S
Sbjct: 541 PSVS 544
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 20/256 (7%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSD-ATAGIGK----DVKRV-- 240
+G++ V T N LI + RGK ++ +V GL + T I DV+++
Sbjct: 292 KGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDS 351
Query: 241 -VRV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
VR+ P + T+N L+ G+ + D+ EM P +Y++L+
Sbjct: 352 AVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILID 411
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
F +A ++ M + DV Y+ ++ G C G M A + F+ +G ++
Sbjct: 412 AFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQP 471
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+SV + +++GYC+ G A+ + N+M + G P ++ IG LC + EA ++L
Sbjct: 472 NSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEA-ELL 530
Query: 411 KARVVKFGLFPTEKSY 426
+++ GL P+ Y
Sbjct: 531 LGQMINSGLKPSVSLY 546
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 12/174 (6%)
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
Y+T++ + +A F M G S TF +L+ R+ D A ++N++
Sbjct: 92 YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNEL- 150
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+ + + ++I C+ + +L A + +FGL P Y LI G C++G +
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLL-AMLEEFGLSPNVVIYTTLIDGCCKDGNV 209
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE---MFENQVR 490
A + +M G P+ YS ++G+ K+G L++E M+EN R
Sbjct: 210 MLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQG-------LQREGFQMYENMKR 256
>gi|449511317|ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 189/434 (43%), Gaps = 56/434 (12%)
Query: 30 SSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLK---NNPH 86
SS+ + H I TV ++T S + H L R L+ + ++ NP
Sbjct: 30 SSSTDNQSLHQNIETVFRIITTSSSSTDMKHSLESSRVFLSNELIDGVLKRVRFSHGNPL 89
Query: 87 LALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKL-KLFE 145
AL FF++T + H+ S T+++IL R+R DV+ L DP L L
Sbjct: 90 QALEFFNYTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVL---LDVKFKDPSLISLRT 146
Query: 146 VLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWE 205
V+V V + K C + V+ R V+ NAL+
Sbjct: 147 VMV-----------VLGRIAKVC-------SVRQTVESFRKFKKFVPEFDVTCFNALLRT 188
Query: 206 VSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEK 265
+ + K ++ +Y GL S RPN+ TFN L+ G+ + E+
Sbjct: 189 LCQEKSMMDARNVYH---GLKS--------------MFRPNLQTFNILLSGW---KSSEE 228
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
E + EM +G +PD SY+ L+ V+C+ R M +A K+ +MRD+++ DV+ Y +IIG
Sbjct: 229 AEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIG 288
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
G +G+ +A +EM G + + +C A + A + ++M KG P
Sbjct: 289 GLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSP 348
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKA-----RVVKFGLFPTEKSYMFLIKGLCEEGKME 440
+T + R F + D+ A R++ G P +S +FL++ + K E
Sbjct: 349 NATTYNLFF------RIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEE 402
Query: 441 EALKVQAEMVGKGF 454
AL++ +M+ KGF
Sbjct: 403 MALELWNDMIQKGF 416
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 5/208 (2%)
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
E D ++ L+ C+E+ M +A ++ ++ ++ +N ++ G+ E AE
Sbjct: 176 EFDVTCFNALLRTLCQEKSMMDARNVYHGLKSM-FRPNLQTFNILLSGWKSSEE---AEG 231
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
FF EM GV+ V++ LV+ YC+ ++D A V M + + T +IG L
Sbjct: 232 FFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGGLG 291
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ +A +ILK + ++G +P +Y I+ C ++ EA + EMV KG P+
Sbjct: 292 LVGQPDKARNILK-EMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNA 350
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFE 486
Y+ F + +++ A L + M +
Sbjct: 351 TTYNLFFRIFFWSNDLQSAWNLYRRMMD 378
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 52/116 (44%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN T+N F+ + +++ M GC P+ S L+ +F + + A
Sbjct: 346 LSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEEMAL 405
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+LW +M K ++ + C++G++ AE F +M G + S +F+ +
Sbjct: 406 ELWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSYTSFKRI 461
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 148/314 (47%), Gaps = 8/314 (2%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
+I I C ++R L G + K + + E+ G + Y V T
Sbjct: 141 DIPDIIACTSLIRGLCKTGKTWKATR----VMEILEDSGAVPDVITY-NVLISGYCKTGE 195
Query: 233 IGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
IG ++ + R V P+V T+N ++ G ++ +V + C PD +Y++L+
Sbjct: 196 IGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIE 255
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C+E + +A KL +EMRDK + DVV YN +I G C+ G + A F M G +
Sbjct: 256 ATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQP 315
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ +T ++ C G A +M RKG P T +LI LC K + A+D+L
Sbjct: 316 NVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVL 375
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ ++ + G P SY L+ LC++ KME A++ MV +G P + Y+ + K
Sbjct: 376 E-KMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCK 434
Query: 471 EGNVEMATMLRKEM 484
+G V++A + ++
Sbjct: 435 DGKVDVAVEILNQL 448
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 133/265 (50%), Gaps = 6/265 (2%)
Query: 231 AGIGKDVKRVVRVR-----PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
+G+G+ +K + +R P+V T+N L+ G +EG ++ M GC+P+ ++
Sbjct: 261 SGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITH 320
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
++++ C R +AEK EM K VV +N +I C G + RA + +M
Sbjct: 321 NIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQ 380
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G +S+++ L++ C+ ++ AI + M +G P+ T L+ LC +V
Sbjct: 381 HGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 440
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
A++IL K G P +Y +I GL + GK ++A+K+ EM GKG +P + YS +
Sbjct: 441 AVEILNQLGSK-GCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLV 499
Query: 466 DGYMKEGNVEMATMLRKEMFENQVR 490
G +EG V+ A ++ E V+
Sbjct: 500 GGLSREGKVDEAIAFFHDLEEMGVK 524
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN L+ R+G + DV +M + GC P+ SY+ L+ C++++M A +
Sbjct: 350 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEY 409
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + D+V YNT++ C+ G++ A E ++G G +T+ +++G +
Sbjct: 410 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSK 469
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G D AI + ++M KG +P+ T L+G L + +V EA+ + + G+ P
Sbjct: 470 VGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFH-DLEEMGVKPNAI 528
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y ++ GLC+ + A+ A MV +G +P+ Y I+G EG + A L E+
Sbjct: 529 TYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNEL 588
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 1/209 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N L+ ++ E+ + M GC PD +Y+ L+ C++ ++ A ++
Sbjct: 385 PNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 444
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ K ++ YNT+I G ++G+ A + EM G++ +T+ LV G R
Sbjct: 445 LNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSR 504
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G VD AI ++D+ G +P T ++ LC R+ A+D L A +V G PTE
Sbjct: 505 EGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFL-AYMVARGCKPTET 563
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
SYM LI+GL EG +EAL++ E+ +G
Sbjct: 564 SYMILIEGLAYEGLAKEALELLNELCSRG 592
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ E K E+M + D++A ++I G C+ G+ +A + SG +T+
Sbjct: 126 LEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNV 185
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++GYC+ G++ SA+ + + R P+ T ++ LCD ++ EA+++L R ++
Sbjct: 186 LISGYCKTGEIGSALQLLD---RMSVSPDVVTYNTILRTLCDSGKLKEAMEVLD-RQMQR 241
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+P +Y LI+ C+E + +A+K+ EM KG +P + Y+ I+G KEG ++ A
Sbjct: 242 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEA 301
Query: 478 TMLRKEM 484
M
Sbjct: 302 IRFLNHM 308
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 108/229 (47%), Gaps = 9/229 (3%)
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
R G E+ +M G PD + + L+ C+ + +A ++ E + D DV+
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
YN +I G+C+ GE+ A + M +S VT+ ++ C +G + A+ V +
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
++ P+ T +LI C + V +A+ +L K G P +Y LI G+C+EG+
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDK-GCKPDVVTYNVLINGICKEGR 297
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFI-----DGYMKEGNVEMATMLRK 482
++EA++ M G +P++ ++ + G + +A M+RK
Sbjct: 298 LDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK 346
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C S+ ++ +I+ L R LIG A DV+ + P++ C
Sbjct: 348 CSPSVVTFNILINFLCRKGLIGRAIDVLE---KMPQHG---------------CTPNSLS 389
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
++ L+ + K K+E ++ + +++SRG + T N L+ + + V EI
Sbjct: 390 YNPLLHALCKDK---KMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 446
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
+ L S + P + T+N ++ G + G + + EM G +P
Sbjct: 447 Q---LGSKGCS-------------PVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKP 490
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D +YS L+ E ++ EA + ++ + V+ + + YN+I+ G C+ + RA +F
Sbjct: 491 DIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFL 550
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
M G + + ++ L+ G G A+ + N++C +G + S +V++
Sbjct: 551 AYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVV 604
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 135/249 (54%), Gaps = 8/249 (3%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+V T+N L+ G + + +M PD ++ L+ F +E ++ EAE
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 303 KLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KL++EM + K+ DVVAYNT+I GFC+ + E FREM G+ ++VT+ L++G
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL---DILKARVVKFG 418
+ +A D D+A +V+ M G P+ T +L+ LC+ V AL + ++ R +K
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ +Y +I+ LC+ GK+E+ + + KG +P++ Y+ + G+ ++G E A
Sbjct: 461 IV----TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 479 MLRKEMFEN 487
L EM E+
Sbjct: 517 ALFVEMKED 525
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 113/249 (45%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ TF L+ G ++ + + M GC+PD +Y ++ C+ A
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +M +E DVV YNTII G C+ M A + F +M G++ T+ L++ C
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G A + +DM K P+ LI + ++ EA + V FP
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LIKG C+ ++EE ++V EM +G + Y+ I G+ + + + A M+ K+
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 484 MFENQVRQE 492
M + V +
Sbjct: 417 MVSDGVHPD 425
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 119/246 (48%), Gaps = 1/246 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ N++T++ + F R + +M +LG P + + L+ FC R+ EA
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L ++M + + D V + T++ G + + + A M + G + VT+ ++NG
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G+ D A+ + N M + E + +I LC + + +A D+ K G+ P
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK-GIKPD 284
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI LC G+ +A ++ ++M+ K P L ++A ID ++KEG + A L
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 483 EMFENQ 488
EM +++
Sbjct: 345 EMVKSK 350
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 20/259 (7%)
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
M+ S+ V N LI + K V G E++RE + G
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE---MSQRGLVG------------- 389
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+ L+ GF++ + + V+ +M G PD +Y++L+ C + A ++
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E M+ ++++ D+V Y T+I C+ G++ + F + L GV+ + VT+ +++G+CR
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 509
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLI-GELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A ++ +M G P T LI L D A I + R F +
Sbjct: 510 GLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFA---GDA 566
Query: 425 SYMFLIKGLCEEGKMEEAL 443
S L+ + +G+++++
Sbjct: 567 STFGLVTNMLHDGRLDKSF 585
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 20/269 (7%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
KL++ +VK+ + C ++ LIK + K ++E +++ R + RGL T
Sbjct: 341 KLYDEMVKS-KHCFPDVVAYNTLIKGFCKYK---RVEEGMEVFREMSQRGLVGNTVTYTT 396
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
LI + + + +++++ SD V P++ T+N L+ G G
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMV---SDG-------------VHPDIMTYNILLDGLCNNG 440
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
E V+ M + + D +Y+ ++ C+ ++ + L+ + K V+ +VV Y
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
T++ GFC G A+ F EM G +S T+ L+ R GD ++ + +M
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSC 560
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDIL 410
GF + ST ++ L D R LD+L
Sbjct: 561 GFAGDASTFGLVTNMLHDGRLDKSFLDML 589
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 115/226 (50%), Gaps = 3/226 (1%)
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
A +V +Y G F + E ++ EM G + +YS+L+ FC M A ++M
Sbjct: 199 ANVVTYY--GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKA 256
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
++E V YN++I G+C++G + A+ +F EM G+ + VT+ L++GYC G+ A
Sbjct: 257 SIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKA 316
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
VYN+M KG P T +I LC + EA+ + + + + P+E +Y +I+
Sbjct: 317 FKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLF-GEMKERKIMPSEVTYNVMIE 375
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G C G + EA + EMVGKGF P Y I G G V A
Sbjct: 376 GHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEA 421
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 160/355 (45%), Gaps = 20/355 (5%)
Query: 151 YRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA------LIW 204
+ +C + V+++LI + + +I ++I LM +GL V T L++
Sbjct: 159 FNQCKLSIVVYNVLIHGLCKSR---RIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLF 215
Query: 205 EVSRGKGVISG---YEIYREVFGLDSDATAGIG-KDVKRVVRVRPNVHTFNALMVGFYRE 260
+ KG+ + Y I + F + IG D + V+ +N+L+ G+ +
Sbjct: 216 KEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKL 275
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G + + EM G P +Y+ L++ +C E +A K++ EM K + + +
Sbjct: 276 GNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTF 335
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
II G C MA A F EM + S VT+ ++ G+CR+G++ A + ++M
Sbjct: 336 TAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVG 395
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEA---LDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
KGF P+ T LI LC RV EA +D L K Y L+ G C+EG
Sbjct: 396 KGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKL----NNMCYSALVHGYCKEG 451
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ ++A+ MV +G L Y+ IDG +E + L KEM + +R +
Sbjct: 452 RFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPD 506
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 118/271 (43%), Gaps = 27/271 (9%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P V T +AL+ G R F V ++ ++ +PD Y YS ++ CE + +A+++
Sbjct: 94 PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCE--------------------------IGEMARAEE 338
M + +V YN +I G C+ G+ AE
Sbjct: 154 IHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAEL 213
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F+EMG G+ ++ +T+ L++ +CR G++D+AI + M + E LI C
Sbjct: 214 LFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYC 273
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
A + K GL PT +Y LI G C EG+ +A KV EM KG P+
Sbjct: 274 KLGNASAAKYYFDEMIDK-GLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNT 332
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++A I G + + A L EM E ++
Sbjct: 333 YTFTAIISGLCRANMMAEAIRLFGEMKERKI 363
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 114/243 (46%), Gaps = 2/243 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ G RE + + EM G PD Y+ ++ + ++EA LW+ M
Sbjct: 475 YAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMV 534
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
D+ +VV Y +I G C+ G M +AE +E +S V + +T+ ++ R G+++
Sbjct: 535 DEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNME 594
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A+ +++ M KGF + +LI C ++ EA +L + + P +Y +
Sbjct: 595 KAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHG-MTDNDILPDYITYSTI 652
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I C+ ++EA+K+ M+ KG +P YS + G G +E A LR EM +
Sbjct: 653 IYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGM 712
Query: 490 RQE 492
R
Sbjct: 713 RSN 715
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 113/232 (48%), Gaps = 3/232 (1%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
D+ A G+ K++ +RP+ + ++ + G ++ +W M GC P+ +Y
Sbjct: 487 DTRALFGLLKEMHNH-GLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTY 545
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ L+ C+ M +AE L +E +V + + Y + G M +A + M L
Sbjct: 546 TALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM-L 604
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G +++V++ L+ G+CR G ++ A + + M P+ T +I E C + + E
Sbjct: 605 KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQE 664
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
A+ + + K GL P +Y FL+ G C G++E+A +++ EM+ +G +
Sbjct: 665 AIKLWHTMLDK-GLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSN 715
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 103/247 (41%), Gaps = 2/247 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N ++AL+ G+ +EG F+ M G D Y++L+ E R L
Sbjct: 436 NNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLL 495
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM + + D V Y +I + G + A + M G + VT+ L+NG C+A
Sbjct: 496 KEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKA 555
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G +D A L+ + P T + L + +A+ + A + G T S
Sbjct: 556 GLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK--GFLATTVS 613
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI+G C GK+EEA K+ M P YS I K N++ A L M
Sbjct: 614 YNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTML 673
Query: 486 ENQVRQE 492
+ ++ +
Sbjct: 674 DKGLKPD 680
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++N L+ GF R G E+ + M PD +YS ++ C+ ++EA KLW M
Sbjct: 613 SYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTM 672
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
DK ++ D +AY+ ++ G C GE+ +A E EM G+ S+ VT
Sbjct: 673 LDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 199/411 (48%), Gaps = 26/411 (6%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
A+ F+ ++ +HS S + H+L+R + + R V+ L + L E+L
Sbjct: 109 AVDFYYLLSNEFGFQHSRFSRLVVSHVLARKKRLNELRLVLDQMLLHEGSGSAPSLCELL 168
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
+ ++R S+ V+D+L C ++ + +V+M V + T N+L++ +
Sbjct: 169 LGSFRSWDSSNVVWDML--ACAYSRSAMVHDALFVLVKM-KDLNFIVSIQTYNSLLYNL- 224
Query: 208 RGKGVISGYEIYRE--VFGL-DSDATAGIGKD-VKRVVRVR---------------PNVH 248
R ++ +++Y E V G S+ T+ I D + R R + P+V
Sbjct: 225 RHSNIM--WDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVV 282
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+FN +M + + G + + + M + G PD YSY++L+ C M EA L +M
Sbjct: 283 SFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDM 342
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ +E D+V YN + GF +G + A ++M + G + VT+ L+ G+C+ G+V
Sbjct: 343 ENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNV 402
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A+ +Y +M GF+ + VL+G LC R+V A + + GL P +Y
Sbjct: 403 EEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLF-CEMEANGLRPDLITYST 461
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
LI GLC++G++++A+ + +M P+ I+ A + G ++G + A M
Sbjct: 462 LIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARM 512
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 196/419 (46%), Gaps = 40/419 (9%)
Query: 100 LCKHSL----SSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECG 155
+ KH L SY +IH L A +G A D ++ + + +P + + +L K +R G
Sbjct: 307 MLKHGLLPDAYSYNILIHGLCIAGSMGEALD-LKNDMENHGLEPDMVTYNILAKGFRLLG 365
Query: 156 SAPFVFDLLIKCCLEVKN---------------IEKIETCVDIVRMLMSRGLSVKVSTCN 200
++++ K ++ N I +E + + + ++S G + + +
Sbjct: 366 LINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISST 425
Query: 201 ALIWEVSRGKGVISGYEIY--REVFGLDSDATA------GIGK--DVKRVV--------- 241
L+ + + + V ++++ E GL D G+ K +V++ +
Sbjct: 426 VLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSN 485
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ PN A+++G +G + + + D Y++++ + + REA
Sbjct: 486 RIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREA 545
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KL++++ +K + +V +N+++ GFC ++++A + L G+E ++VT+ L+N
Sbjct: 546 VKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNV 605
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC G++ S + + ++M K P T V+I LC + ++ E+ +L+ + GL P
Sbjct: 606 YCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLE-DMDAVGLTP 664
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+ SY +I+ C+ M +A ++ +M+ EP+ Y+ I+G+ G+++ A L
Sbjct: 665 DQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNL 723
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 134/290 (46%), Gaps = 43/290 (14%)
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
KD+ +V ++ T+N+L+ + DV+ E+ G Y+ S+++ C
Sbjct: 206 KDLNFIVSIQ----TYNSLLYNLRHSNI---MWDVYNEIKVSGTPQSEYTSSIVVDGLCR 258
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ R ++A +++ K + VV++NTI+ +C++G + A+ FF M G+ + +
Sbjct: 259 QSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYS 318
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L++G C AG + A+ + NDM G EP+ T +L + A +I++ +
Sbjct: 319 YNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKML 378
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE------------------- 455
+K G P +Y LI G C+ G +EEALK+ EM+ GF+
Sbjct: 379 IK-GPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQV 437
Query: 456 ----------------PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
P L YS I G K+G V+ A +L ++M N++
Sbjct: 438 DVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRI 487
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 1/212 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P T+ ++ G ++ ++ + +M +G PD SY+ ++ FC+ R MR+A
Sbjct: 627 IGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAF 686
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+++M N+E V YN +I GFC G++ A+ + V + + ++ +
Sbjct: 687 QLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAH 746
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C GDVD A++ + M KGFE +IG LC + V EA ++ G+ P
Sbjct: 747 CAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEA-KYFFCMMLSDGVCPD 805
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+ + L+ + G + ++ AEM+ G+
Sbjct: 806 QDLFEVLLNAFHQCGHLNSEFELLAEMIKSGW 837
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 10/204 (4%)
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
+ +L + + +A + +M+D N + YN+++ M + + E+
Sbjct: 182 WDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMW---DVYNEIK 238
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
+SG S T +V+G CR A+L + D K F+P + ++ C V
Sbjct: 239 VSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFV- 297
Query: 405 EALDILKA---RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
D+ K+ ++K GL P SY LI GLC G M EAL ++ +M G EP + Y
Sbjct: 298 ---DVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTY 354
Query: 462 SAFIDGYMKEGNVEMATMLRKEMF 485
+ G+ G + A + ++M
Sbjct: 355 NILAKGFRLLGLINGAWNIIQKML 378
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 196/458 (42%), Gaps = 49/458 (10%)
Query: 35 SDQSHNLIATVVSLLTHHRSKSRWN-----HLLSLCRSGLTPTQFSQIALGLKNNPHLAL 89
S+ H ++ V L+T S WN L L RS L P + L + + +AL
Sbjct: 130 SEFRHPVVREVCRLIT---LSSAWNPNFEGRLRHLLRS-LKPPLVCAV-LRSQADERVAL 184
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVK 149
FF + + H Y T++ +LS+ +L AR V+R+ R P V+V
Sbjct: 185 NFFYWADRQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMV- 243
Query: 150 TYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG 209
+Y G K+ + ++ ++ G+ +S CN I+ + +G
Sbjct: 244 SYSRAG--------------------KLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKG 283
Query: 210 KGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDV 269
+ + + +V ++P++ T+N+L+ G+ E ++
Sbjct: 284 GKLEKALKFLERM----------------QVTGIKPDIVTYNSLIKGYCDLNRIEDALEL 327
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM-RDKNVEHDVVAYNTIIGGFC 328
+ GC PD SY +M C+E+++ E + L E+M + N+ D V YNT+I
Sbjct: 328 IAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLS 387
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ G A F +E G V + +V+ +C+ G +D A + DM +G P+
Sbjct: 388 KHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVV 447
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
T ++ C R+ EA IL+ ++ K G P SY L+ GLC GK EA ++
Sbjct: 448 TYTAIVDGFCRLGRIDEAKKILQ-QMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINV 506
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ P+ Y A + G +EG + A L +EM E
Sbjct: 507 SEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVE 544
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 117/245 (47%), Gaps = 3/245 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+ A+M G REG + D+ EM G P ++L+ C+ +++ EA+K
Sbjct: 514 PNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKY 573
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EE +K +VV + T+I GFC+IG+M A +M LSG +VT+ L + +
Sbjct: 574 LEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGK 633
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +D A + M KG +P T +I RV + L++L+ + + P
Sbjct: 634 KGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR---QPFRT 690
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y +I+ LC+ G +EEA K+ +++ + ++ Y+K+G A + M
Sbjct: 691 VYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRM 750
Query: 485 FENQV 489
F +
Sbjct: 751 FRRNL 755
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 108/240 (45%), Gaps = 2/240 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
F +MV + R G V M + G EP + + V + ++ +A K E M
Sbjct: 237 AFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERM 296
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ ++ D+V YN++I G+C++ + A E + G V++ ++ C+ +
Sbjct: 297 QVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKI 356
Query: 369 DSAILVYNDMC-RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+ + M P+ T LI L +AL LK K G + Y
Sbjct: 357 EEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDK-GFHIDKVGYS 415
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++ C++G+M+EA + +M +G P + Y+A +DG+ + G ++ A + ++M+++
Sbjct: 416 AIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKH 475
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 79/175 (45%), Gaps = 3/175 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+ AL ++G ++ ++ V+M G +P +Y ++ + + R+ + L
Sbjct: 619 PDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNL 678
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+M + V YN +I C+ G + AE+ ++ + + + T L+ Y +
Sbjct: 679 LEKMLKRQPFRTV--YNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLK 736
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
G SA V M R+ P+ E + +L ++ EA D L R V+ G+
Sbjct: 737 KGVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEA-DNLMLRFVERGI 790
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 129/274 (47%), Gaps = 34/274 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN HT++ LM GF+++G + ++ M R G P+ Y+Y+ L++ +C + + +A K+
Sbjct: 226 PNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKV 285
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EMR+K + V+ YN +IGG C + A + ++ G+ + VT+ L+NG+C
Sbjct: 286 FAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCD 345
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK------------- 411
G +D+A+ ++N + G P T LI + ALD++K
Sbjct: 346 VGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVT 405
Query: 412 --------ARVV-------------KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
AR+ K GL P +Y LI G C G M+EA K +
Sbjct: 406 YTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLG 465
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+P+ IY+ I GY KEG+ A L EM
Sbjct: 466 EMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEM 499
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 122/244 (50%), Gaps = 1/244 (0%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T+N L+ G R F + + ++ ++G P+ +Y++L+ FC+ +M A +L+
Sbjct: 298 VMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFN 357
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+++ + +V YNT+I G+ ++ +A A + +EM + S VT+ L++ + R
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLN 417
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
D A +++ M + G P+ T VLI C + EA K+ + + L P Y
Sbjct: 418 YTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKS-LGEMHLQPNSVIY 476
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+I G C+EG AL++ EMV G P++ + + + ++ + A +L +M
Sbjct: 477 NTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMIN 536
Query: 487 NQVR 490
+ ++
Sbjct: 537 SGLK 540
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 21/244 (8%)
Query: 147 LVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
LV + G +P + +++LI +V K++T V + L S GLS + T N LI
Sbjct: 320 LVHKVNKVGLSPNIVTYNILINGFCDVG---KMDTAVRLFNQLKSSGLSPTLVTYNTLIA 376
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
S+ + + ++ +E+ + + + R + T+ L+ F R +
Sbjct: 377 GYSKVENLAGALDLVKEM-------------EERCIARSKV---TYTILIDAFARLNYTD 420
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
K ++ M + G PD Y+YSVL+ C M+EA K ++ + + +++ + V YNT+I
Sbjct: 421 KACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMI 480
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G+C+ G RA EM SG+ + +F + CR A L+ M G +
Sbjct: 481 HGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLK 540
Query: 385 PEGS 388
P S
Sbjct: 541 PSVS 544
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 18/177 (10%)
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
Y+ I+ + +A F M G S TF +L+ R+ D A ++N +
Sbjct: 92 YDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVL- 150
Query: 380 RKGFEPEGSTIEVLIGELCDKR---RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
+ + ++I C+ RVF L +L+ +FGL P Y LI G C+
Sbjct: 151 KSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLE----EFGLSPNVVIYTTLIDGCCKN 206
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE---MFENQVR 490
G + A + +M G P+ YS ++G+ K+G L++E M+EN R
Sbjct: 207 GDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQG-------LQREGFQMYENMNR 256
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 188/390 (48%), Gaps = 44/390 (11%)
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL 143
+P LA R F + + +H++ +Y ++ L + AR K+
Sbjct: 16 SPKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKAR----------------KI 59
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
F+ ++ Y+EC + + ++++ + + K + +++++ + S+ L+ N L+
Sbjct: 60 FDDML--YKECLPNIYTYGIVLR---GLCDDAKTDAALELLQDMESKMLTPTTFIVNMLV 114
Query: 204 WEVSRGKGVISGYEIYREV---FGLDSDA----TAGIGK--DVKRVVRV---------RP 245
+ + V + YE+Y+ + LD + T G+ K + R + V P
Sbjct: 115 SCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVP 174
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEM--ARLGCE--PDCYSYSVLMAVFCEERRMREA 301
++ T+N L+ G+ R G E+ + EM + G + PD YSY+ +++ FC+ R++ A
Sbjct: 175 SLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTA 234
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ M +VV +NT++ G C G++ A F M E ++VT+ L+ G
Sbjct: 235 RYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITG 294
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ RA +D A + DM R+G EP T LIG LCD +V +AL+ILK R+ G P
Sbjct: 295 HARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILK-RMSSTGREP 353
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+Y +I LC+ G++E A K+ + +G
Sbjct: 354 NVVTYTRVIGALCKGGQIERATKLFNDAMG 383
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 111/244 (45%), Gaps = 4/244 (1%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
V T+NA + + G K ++ +M C P+ Y+Y +++ C++ + A +L
Sbjct: 36 TVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELL 95
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++M K + N ++ C+ G++ A E ++ + +++ L G C+A
Sbjct: 96 QDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLS-DECSLDRISYNMLTYGLCKA 154
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV-KFG--LFPT 422
+D A+ V+ +M P T L+ C R+ +A+ +L+ + K G + P
Sbjct: 155 DQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPD 214
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY +I G C+ ++ A V M+ G P++ ++ +DG G ++ A + +
Sbjct: 215 MYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFE 274
Query: 483 EMFE 486
M E
Sbjct: 275 YMVE 278
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
R ++ +H V YN + + G ++A + F +M + T+ ++ G C
Sbjct: 29 RQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKT 88
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D+A+ + DM K P + +L+ LC +V A ++ K + L SY
Sbjct: 89 DAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSL--DRISYNM 146
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
L GLC+ +++ AL V EM PSL Y+ + GY + G +E A L +EM E +
Sbjct: 147 LTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGK 206
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 109/273 (39%), Gaps = 53/273 (19%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSP-------------------ENDPKLKLF 144
+ SY T+I +AR + AR V+R ++S + D +F
Sbjct: 214 DMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMF 273
Query: 145 EVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKI-ETCVDIVRMLMSRGLSVKVSTCNALI 203
E +V+ R C + +LI I+K + VD++R RG+ V T ALI
Sbjct: 274 EYMVE--RNCEPTAVTYTVLITGHARALRIDKANDYFVDMLR----RGVEPNVYTYTALI 327
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
+ V EI + + + G++ PNV T+ ++ + G
Sbjct: 328 GGLCDANKVEDALEILKRM--------SSTGRE--------PNVVTYTRVIGALCKGGQI 371
Query: 264 EKVEDVWVEM--ARLG-CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA- 319
E+ ++ + +R C+PD Y+YS ++ C + + EA + + M VE +VA
Sbjct: 372 ERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRM----VESKLVAK 427
Query: 320 ---YNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
Y + G + E + E E G+E
Sbjct: 428 PHIYKAMADGLELVQETEKVERVCLEASAHGIE 460
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 121/235 (51%), Gaps = 1/235 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV TFN L+ + G E+ + M + G PD ++Y+ L+ FC E R+ +A
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDAR 363
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ M K +E D V+YN +I G+C+ G M A++ +REM + + +T+ L+ G
Sbjct: 364 DLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGL 423
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
R G V A ++ +M PE T +L+ LC + EA+++ + P+
Sbjct: 424 FREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFH-YLENHDFQPS 482
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ + LI GLC+ K+E A ++ + +G EP++ Y+ I G K G +E A
Sbjct: 483 IQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENA 537
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 125/242 (51%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N L+ GF EG + D++V M G E D SY+VL+ +C+ RM EA+KL
Sbjct: 341 PDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKL 400
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM K + V+ YNT++ G G++ A F EM + + S T+ L++G C+
Sbjct: 401 YREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCK 460
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ A+ +++ + F+P LI LC R++ A ++ R+ GL P
Sbjct: 461 NNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFN-RLSHEGLEPNVI 519
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I GLC+ G++E A + M KG P+L ++ + G+ + ++ L +EM
Sbjct: 520 TYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEM 579
Query: 485 FE 486
E
Sbjct: 580 AE 581
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 169/356 (47%), Gaps = 31/356 (8%)
Query: 140 KLKLFEVLVKTYRE---CGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSV 194
K+K + ++ Y+ G AP ++LI C N+ K++ + ++ ++ RG S
Sbjct: 104 KIKRYFDVISLYKRMSLIGLAPDFITLNILINC---YCNLNKVDFGLAVLGEMLRRGHSP 160
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALM 254
T +L+ KG+ G I S+AT + K V+ + RPNV T+ L+
Sbjct: 161 NTVTFTSLV------KGLCLGSRI--------SEATGLLRKMVR--MGYRPNVVTYGTLL 204
Query: 255 VGFYREGAFEKVEDVWVEMAR------LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
G G + EM + +P+ Y ++ C++ + + ++L+ EM
Sbjct: 205 NGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEM 264
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + + DVVAY++II G C G A+ F EM GV + VTF L++ C+AG +
Sbjct: 265 KGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKM 324
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A + M ++G P+ T LI C + R+ +A D+ + K G+ SY
Sbjct: 325 EEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESK-GIETDAVSYNV 383
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LI G C+ G+M EA K+ EM+ K P++ Y+ + G +EG V A L EM
Sbjct: 384 LINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEM 439
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 131/250 (52%), Gaps = 6/250 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V +++++ G G +E + ++ EM G P+ +++VL+ C+ +M EA
Sbjct: 269 ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEAN 328
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L + M + D YNT+I GFC G + A + F M G+E+ +V++ L+NGY
Sbjct: 329 HLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGY 388
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++G + A +Y +M K P T L+ L + +V +A ++ V L P
Sbjct: 389 CKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVH-DLTPE 447
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ GLC+ + EA+++ + F+PS++I++ IDG K +E+A +
Sbjct: 448 SCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIA----R 503
Query: 483 EMFENQVRQE 492
E+F N++ E
Sbjct: 504 ELF-NRLSHE 512
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 167/378 (44%), Gaps = 20/378 (5%)
Query: 108 YATIIHILSRARLIGPARDVI--RVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDL 163
Y +I + R LIG A D I + + N K+ ++ G +P F
Sbjct: 108 YFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTS 167
Query: 164 LIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
L+K CL +I ++R ++ G V T L+ + + +++ E+
Sbjct: 168 LVKGLCLG----SRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEM 223
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+ G G V ++PN+ + ++ ++G +K +++++EM G PD
Sbjct: 224 L----NGNGGFG------VTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDV 273
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+YS ++ C R A+ L+ EM D+ V +VV +N +I C+ G+M A +
Sbjct: 274 VAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKL 333
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G + T+ L++G+C G +D A ++ M KG E + + VLI C R
Sbjct: 334 MIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGR 393
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ EA + + + K + PT +Y L+ GL EGK+ +A + EM P Y+
Sbjct: 394 MVEAKKLYREMMCK-EIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYN 452
Query: 463 AFIDGYMKEGNVEMATML 480
+DG K ++ A L
Sbjct: 453 ILLDGLCKNNHLSEAMEL 470
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 121/251 (48%), Gaps = 7/251 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TF +L+ G + + +M R+G P+ +Y L+ C A KL
Sbjct: 160 PNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKL 219
Query: 305 WEEMRDKN------VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EEM + N ++ ++V Y TII C+ G + + +E F EM G+ V + +
Sbjct: 220 HEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSI 279
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++G C G + A ++N+M +G P T VLI LC ++ EA +LK +++ G
Sbjct: 280 IHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKL-MIQRG 338
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
P +Y LI G C EG++++A + M KG E Y+ I+GY K G + A
Sbjct: 339 ESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAK 398
Query: 479 MLRKEMFENQV 489
L +EM ++
Sbjct: 399 KLYREMMCKEI 409
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 144/319 (45%), Gaps = 29/319 (9%)
Query: 147 LVKTYRECGSAP--FVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
L+K + G +P F ++ LI CLE +I+ D+ + S+G+ + N LI
Sbjct: 330 LLKLMIQRGESPDTFTYNTLIDGFCLE----GRIDDARDLFVSMESKGIETDAVSYNVLI 385
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
+ ++ ++YRE+ + P V T+N L+ G +REG
Sbjct: 386 NGYCKSGRMVEAKKLYREMM----------------CKEIMPTVITYNTLLTGLFREGKV 429
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
+++ EM P+ +Y++L+ C+ + EA +L+ + + + + + +N +
Sbjct: 430 RDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCL 489
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I G C+ ++ A E F + G+E + +T+ +++G C++G +++A ++ M KG
Sbjct: 490 IDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGC 549
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
P T L+ C + + +++L+ K P + ++ L ++ K E L
Sbjct: 550 APNLVTFNTLMRGFCQNDEMQKVVELLQEMAEK-DFSPDASTISIVVDLLSKDEKYREYL 608
Query: 444 KVQAEM-----VGKGFEPS 457
+ G+G+E S
Sbjct: 609 HLLPTFPAQGQTGRGYEKS 627
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 19/254 (7%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + +FN L+ + + V ++ M+ +G PD + ++L+ +C ++ +
Sbjct: 90 PPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAV 149
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM + + V + +++ G C ++ A R+M G + VT+ L+NG C
Sbjct: 150 LGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCM 209
Query: 365 AGDVDSAILVYNDMC--RKGFEPEGSTIE-------VLIGELCDKRRVFEALDI---LKA 412
G+ A+ ++ +M GF G TI+ +I LC + + ++ +K
Sbjct: 210 TGNTMLAVKLHEEMLNGNGGF---GVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKG 266
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
R G+ P +Y +I G+C G+ E A + EMV +G P++ ++ ID K G
Sbjct: 267 R----GISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAG 322
Query: 473 NVEMATMLRKEMFE 486
+E A L K M +
Sbjct: 323 KMEEANHLLKLMIQ 336
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 7/191 (3%)
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
EA ++ + D + ++NT++G +I ++ M L G+ +T L+
Sbjct: 75 EAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILI 134
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
N YC VD + V +M R+G P T L+ LC R+ EA +L+ ++V+ G
Sbjct: 135 NCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLR-KMVRMGY 193
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMV------GKGFEPSLEIYSAFIDGYMKEGN 473
P +Y L+ GLC G A+K+ EM+ G +P+L Y ID K+G
Sbjct: 194 RPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGL 253
Query: 474 VEMATMLRKEM 484
++ L EM
Sbjct: 254 IDKGKELFLEM 264
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 130/246 (52%), Gaps = 1/246 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V +FN ++ +EG + DV +M + G EP+ +Y+ LM C M EA
Sbjct: 266 KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEA 325
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+++ M K +V++YNT+I G+C+I + +A F EM + +VT+ L++G
Sbjct: 326 VKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHG 385
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C + AI ++++M P T +L+ LC R + EA+ +LKA + L P
Sbjct: 386 LCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKA-IEGSNLDP 444
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ I G+C G++E A + + + KG +P + YS I+G + G ++ A+ L
Sbjct: 445 DIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLF 504
Query: 482 KEMFEN 487
+EM EN
Sbjct: 505 REMDEN 510
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 202/461 (43%), Gaps = 53/461 (11%)
Query: 33 PPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFF 92
PPS N + T ++ + HH + +H + G+ P ++ + + + + HL F
Sbjct: 58 PPSTVDFNKLLTSIAKMKHHSTLLSLSHQMD--SFGIPPNIYT-LHILINSFCHLNRVGF 114
Query: 93 SFTQHKSLCK----HSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
+F+ + K +++ T+I + IG A L LF+ ++
Sbjct: 115 AFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEA----------------LHLFDKMI 158
Query: 149 KTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
G P V + LI +V N + ++ ++ + V N +I +
Sbjct: 159 GE----GFRPDVVTYGTLINGLCKVGNTS---AAIRLLGSMVQKNCQPNVFAYNTIIDSL 211
Query: 207 SRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
+ + V + ++ E+ T GI P++ T+N+L+ ++ V
Sbjct: 212 CKDRQVTEAFNLFSEM------VTKGIS----------PDIFTYNSLIHALCNLCEWKHV 255
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ EM PD S++ ++ C+E ++ EA + ++M + VE +VV Y ++ G
Sbjct: 256 ATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDG 315
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
C + EM A + F M G + +++ L+NGYC+ +D A+ ++ +MCR+ P+
Sbjct: 316 HCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPD 375
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T LI LC R+ +A+ + +V P +Y L+ LC+ + EA+ +
Sbjct: 376 TVTYSTLIHGLCHVERLQDAIALFH-EMVACSQIPNLVTYRILLDYLCKNRYLAEAMALL 434
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ G +P +++ + IDG + G +E A +++F N
Sbjct: 435 KAIEGSNLDPDIQVNNIAIDGMCRAGELEAA----RDLFSN 471
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 5/249 (2%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ TF L+ G Y EG + ++ +M G PD +Y L+ C+ A +
Sbjct: 128 QPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIR 187
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L M KN + +V AYNTII C+ ++ A F EM G+ T+ L++ C
Sbjct: 188 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC 247
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ + N+M P+ + ++ LC + +V EA D++ ++++ G+ P
Sbjct: 248 NLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVD-KMIQRGVEPNV 306
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ G C +M+EA+KV MV KG P++ Y+ I+GY K ++ A L E
Sbjct: 307 VTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGE 366
Query: 484 MFENQVRQE 492
M RQE
Sbjct: 367 M----CRQE 371
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 2/200 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T++ L+ G + ++ EM P+ +Y +L+ C+ R + EA L
Sbjct: 374 PDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMAL 433
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + N++ D+ N I G C GE+ A + F + G++ T+ ++NG CR
Sbjct: 434 LKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCR 493
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +D A ++ +M G G + A+ +L+ V + F +
Sbjct: 494 RGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARG--FSADA 551
Query: 425 SYMFLIKGLCEEGKMEEALK 444
S M L + + ++++LK
Sbjct: 552 STMTLFVKMLSDDGLDQSLK 571
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 1/217 (0%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M R+ P ++ L+ + + L +M + ++ + +I FC +
Sbjct: 52 MLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNR 111
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A ++ G + + TF L+ G G + A+ +++ M +GF P+ T
Sbjct: 112 VGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGT 171
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI LC A+ +L + V K P +Y +I LC++ ++ EA + +EMV K
Sbjct: 172 LINGLCKVGNTSAAIRLLGSMVQK-NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK 230
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G P + Y++ I + L EM ++++
Sbjct: 231 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI 267
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 162/321 (50%), Gaps = 26/321 (8%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+E VD+ + ++G+ V T N+LI + +G SDA+ +
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCN--------------YGRWSDASRLLSNM 319
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
+++ ++ PNV TFNAL+ F++EG + E + EM + +PD +Y++L+ FC
Sbjct: 320 LEK--KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
R+ EA+++++ M K+ ++ YNT+I GFC+ + E FREM G+ ++VT+
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKAR 413
++ G+ +AGD DSA +V+ M + T +L+ LC ++ AL I L+
Sbjct: 438 TIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS 497
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
++ +F Y +I+G+C+ GK+ EA + + +P + Y+ I G +
Sbjct: 498 EMELNIFI----YNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRL 550
Query: 474 VEMATMLRKEMFENQVRQEDG 494
++ A L ++M E+ G
Sbjct: 551 LQEADDLFRKMKEDGTLPNSG 571
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 123/258 (47%), Gaps = 3/258 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
SDA A + + V+ + +P+ TF L+ G + + + +M + GC+PD +Y
Sbjct: 170 SDAVALVDQMVE--MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ C+ + A L +M ++ +VV +NTII C+ + A + F EM
Sbjct: 228 TVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+ + VT+ L+N C G A + ++M K P T LI + ++ EA
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ L +++ + P +Y LI G C +++EA ++ MV K P+++ Y+ I+
Sbjct: 348 -EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Query: 467 GYMKEGNVEMATMLRKEM 484
G+ K VE L +EM
Sbjct: 407 GFCKCKRVEDGVELFREM 424
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 139/330 (42%), Gaps = 43/330 (13%)
Query: 199 CNALIWEVSRGKGVISGYEIYR----EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALM 254
C + WE S EI R ++ +D DA G VK R P++ FN L+
Sbjct: 34 CGSGCWERSFASASGDYREILRNRLSDIIKVD-DAVDLFGDMVKS--RPFPSIVEFNKLL 90
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
+ FE V + +M LG D Y+YS+ + FC ++ A + +M E
Sbjct: 91 SAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYE 150
Query: 315 HDVVAYNTIIGGFC-------------EIGEMARAEEFFR-------------------- 341
D+V ++++ G+C ++ EM + F
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 342 --EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+M G + VT+ +VNG C+ GD+D A+ + N M + +I LC
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
R V A+D+ K G+ P +Y LI LC G+ +A ++ + M+ K P++
Sbjct: 271 YRHVEVAVDLFTEMETK-GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++A ID + KEG + A L +EM + +
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R++ NV FN ++ + E D++ EM G P+ +Y+ L+ C R +A
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA 312
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L M +K + +VV +N +I F + G++ AE+ EM ++ ++T+ L+NG
Sbjct: 313 SRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C +D A ++ M K P T LI C +RV + +++ + + + GL
Sbjct: 373 FCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR-EMSQRGLVG 431
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y +I+G + G + A V +MV + YS + G G ++ A ++
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Query: 482 KEM 484
K +
Sbjct: 492 KYL 494
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 123/248 (49%), Gaps = 5/248 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T ++L+ G+ + +M +G +PD ++++ L+ + EA L
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M + + D+V Y T++ G C+ G++ A +M + ++++ V F +++ C+
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
V+ A+ ++ +M KG P T LI LC+ R +A +L + K + P
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVV 329
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI +EGK+ EA K+ EM+ + +P Y+ I+G+ ++ A K+M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA----KQM 385
Query: 485 FENQVRQE 492
F+ V ++
Sbjct: 386 FKFMVSKD 393
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 123/281 (43%), Gaps = 31/281 (11%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
KL E +++ R ++LLI C+ +++ + + ++S+ + T N
Sbjct: 349 KLHEEMIQ--RSIDPDTITYNLLINGFCMH----NRLDEAKQMFKFMVSKDCLPNIQTYN 402
Query: 201 ALIWEVSRGKGVISGYEIYREVF--GL------------------DSDATAGIGKDVKRV 240
LI + K V G E++RE+ GL D D+ + K +
Sbjct: 403 TLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN 462
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
RV ++ T++ L+ G G + ++ + + E + + Y+ ++ C+ ++ E
Sbjct: 463 -RVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A W+ +++ DVV YNT+I G C + A++ FR+M G +S T+ L+
Sbjct: 522 A---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
R D ++ + +M GF + STI ++ L D R
Sbjct: 579 ANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGR 619
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 143/260 (55%), Gaps = 4/260 (1%)
Query: 228 DATAGIGKD-VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
D A + +D +KR ++ PNV TF+ L+ F +EG + + + EM + G P+ +Y+
Sbjct: 315 DDGAKLLRDMIKR--KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L+ FC+E R+ EA ++ + M K + D++ +N +I G+C+ + E FREM L
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
GV +++VT+ LV G+C++G ++ A ++ +M + P+ + ++L+ LCD + +A
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L+I ++ K + YM +I G+C K+++A + + KG + Y+ I
Sbjct: 493 LEIF-GKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 467 GYMKEGNVEMATMLRKEMFE 486
++ ++ A +L ++M E
Sbjct: 552 ELCRKDSLSKADILFRKMTE 571
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 133/253 (52%), Gaps = 9/253 (3%)
Query: 237 VKRVVRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARL---GCEPDCYSYSVLMAV 291
V R+V + +P + T N L+ G G KV D V + R+ G +P+ +Y ++ V
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNG---KVSDAVVLIDRMVETGFQPNEVTYGPVLNV 237
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+ + A +L +M ++N++ D V Y+ II G C+ G + A F EM + G ++
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+T+ L+ G+C AG D + DM ++ P T VLI + ++ EA +LK
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+++ G+ P +Y LI G C+E ++EEA+++ M+ KG +P + ++ I+GY K
Sbjct: 358 -EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 472 GNVEMATMLRKEM 484
++ L +EM
Sbjct: 417 NRIDDGLELFREM 429
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 125/235 (53%), Gaps = 1/235 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ + ++ ++ G ++G+ + +++ EM G + D +Y+ L+ FC R +
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL +M + + +VV ++ +I F + G++ A++ +EM G+ +++T+ L++G+
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ ++ AI + + M KG +P+ T +LI C R+ + L++ + ++ G+
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR-GVIAN 437
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y L++G C+ GK+E A K+ EMV + P + Y +DG G +E A
Sbjct: 438 TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 118/234 (50%), Gaps = 1/234 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+ ++ T+N L+ GF G ++ + +M + P+ ++SVL+ F +E ++REA++
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +EM + + + + YN++I GFC+ + A + M G + +TF L+NGYC
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+A +D + ++ +M +G T L+ C ++ E L +V + P
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL-EVAKKLFQEMVSRRVRPDI 473
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
SY L+ GLC+ G++E+AL++ ++ E + IY I G V+ A
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA 527
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 143/315 (45%), Gaps = 15/315 (4%)
Query: 185 RMLMSRGLSVKVSTC-NALIWEVSRGKGVISGYEI-YRE-----VFGLDSDATAGIGKDV 237
R+L + L + + C N L++ RG S + YR+ + G+ +D + +D+
Sbjct: 20 RLLETGTLRIALINCPNELLFCCERGFSTFSDRNLSYRDKLSSGLVGIKADDAVDLFRDM 79
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
+ R P V FN L + +E V + +M G Y+ S+++ FC R+
Sbjct: 80 IQS-RPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRK 138
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A ++ E D V +NT++ G C ++ A E M G + + +T
Sbjct: 139 LSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNT 198
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA---RV 414
LVNG C G V A+++ + M GF+P T ++ +C + A+++L+ R
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+K Y +I GLC++G ++ A + EM KGF+ + Y+ I G+ G
Sbjct: 259 IKLDAV----KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 475 EMATMLRKEMFENQV 489
+ L ++M + ++
Sbjct: 315 DDGAKLLRDMIKRKI 329
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 114/222 (51%), Gaps = 1/222 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ TFN L+ G+ + + +++ EM+ G + +Y+ L+ FC+ ++ A+KL
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++EM + V D+V+Y ++ G C+ GE+ +A E F ++ S +E + +++G C
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A VD A ++ + KG + + ++I ELC K + +A DIL ++ + G P E
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKA-DILFRKMTEEGHAPDEL 579
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+Y LI+ + A ++ EM GF + I+
Sbjct: 580 TYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 146/327 (44%), Gaps = 25/327 (7%)
Query: 119 RLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKC-CLEVKNIE 175
R I P V + S + KL+ + L+K + G AP ++ LI C E
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE----N 382
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++E + +V +++S+G + T N LI + + G E++RE+
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM------------- 429
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ V N T+N L+ GF + G E + ++ EM PD SY +L+ C+
Sbjct: 430 ---SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ +A +++ ++ +E D+ Y II G C ++ A + F + L GV+ + +
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++ CR + A +++ M +G P+ T +LI A ++++ +
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEE--M 604
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEA 442
K FP + S + ++ + G+++++
Sbjct: 605 KSSGFPADVSTVKMVINMLSSGELDKS 631
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A L+ +M V+ +N + + + ++M G+ S T ++
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
N +CR + A + + G+EP+ L+ LC + RV EAL+++ R+V+ G
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVD-RMVEMGH 189
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
PT + L+ GLC GK+ +A+ + MV GF+P+ Y ++ K G +A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 480 LRKEMFENQVRQE 492
L ++M E ++ +
Sbjct: 250 LLRKMEERNIKLD 262
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 150/326 (46%), Gaps = 22/326 (6%)
Query: 160 VFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
V+++ I C C+ + K + I+ + + GL ST N +I R ++
Sbjct: 556 VYNVFINCLCI----LGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
E+ ++ ++PN+ T+N L+ G + GA EK + + EM G
Sbjct: 612 LHEM----------------KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGF 655
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P ++ ++ + RR+ + E M + + D+ YNT++ C G +A
Sbjct: 656 SPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATV 715
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
EM SG+ ++TF L+ G+C++ +D+A Y M + P +T L+G L
Sbjct: 716 VLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLE 775
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
R+ EA +L + K GL P +Y L+ G ++ EA+++ EMVGKGF P +
Sbjct: 776 SVGRIGEAGTVL-IEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKV 834
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEM 484
Y+A I + K G + A L K+M
Sbjct: 835 STYNALISDFTKAGMMTQAKELFKDM 860
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 198/451 (43%), Gaps = 66/451 (14%)
Query: 58 WNHLLS-LCRSGLTPTQFS----QIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATII 112
WN L++ CR G TP S A GL + + Y T++
Sbjct: 172 WNTLIAGYCRVGDTPAALSVADRMTAQGLPMD--------------------VVGYNTLV 211
Query: 113 HILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVK 172
RA + AR V+ + ++ DP V TY PF+ + C
Sbjct: 212 AGFCRAGQVDAARGVLDM-MKEAGVDPN-------VATY-----TPFI----VYYC---- 250
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG-------- 224
+ +E D+ ++ G+ + V T +AL+ + R Y ++RE+
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHV 310
Query: 225 -----LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
+DS A AG GK++ ++ V ++ T+ ALM ++G ++V+D
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
+ +Y+VL+ C+ + EAE++ EM +K++ +VV ++++I GF + G +
Sbjct: 371 LSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+A E+ R M G+ + VT+ L++G+ + D+A+ VY+DM +G E ++ L
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSL 490
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ L ++ EA+ + K GL +Y LI GL + G M A K E++ +
Sbjct: 491 VNGLRQNGKIEEAMALFK-DASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P +Y+ FI+ G + A + EM
Sbjct: 550 MLPDAVVYNVFINCLCILGKFKEAKSILTEM 580
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 139/325 (42%), Gaps = 22/325 (6%)
Query: 185 RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV---------FGLDS-------- 227
RM+ RG++ V T LI + +G + E+Y ++ F +DS
Sbjct: 438 RMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQN 497
Query: 228 ---DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+ + KD +V+ + L+ G ++ G E+ PD
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVN-YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+V + C + +EA+ + EMR+ ++ D YNT+I C GE A+A + EM
Sbjct: 557 YNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
+S ++ + +T+ LV G G V+ A + N+M GF P T ++ RR+
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
LDI ++ GL Y L++ LC G +A V EM+G G P ++A
Sbjct: 677 VILDI-HEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735
Query: 465 IDGYMKEGNVEMATMLRKEMFENQV 489
I G+ K +++ A +M +
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNI 760
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 166/389 (42%), Gaps = 22/389 (5%)
Query: 106 SSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLI 165
+S +++ R RL+ PA ++R + P + +L+ + AP V +
Sbjct: 74 ASLNALLYSHCRLRLLRPAIALLR------SSRPTTVAYNILLAALSDHAHAPAVLAEMC 127
Query: 166 KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV----ISGYEIYRE 221
K + + T ++ L G +V AL RG G+ + G+
Sbjct: 128 KRGVPFDGV----TVNTLLAGLCRNG---QVDAAAAL---ADRGGGIHALDVIGWNTLIA 177
Query: 222 VFGLDSDATAGIGKDVKRVVRVRP-NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
+ D A + + + P +V +N L+ GF R G + V M G +P
Sbjct: 178 GYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP 237
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+ +Y+ + +C + + EA L+E M V DVV + ++ G C G + A F
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
REM G + VT+ L++ +AG + + +M +G + T L+ L +
Sbjct: 298 REMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQ 357
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+ E D L+ + L +Y LI LC+ ++EA +V EM K P++
Sbjct: 358 GKTDEVKDTLRF-ALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVT 416
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+S+ I+G++K G ++ AT ++ M E +
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGI 445
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ ++ +N L+ G K V EM G PD +++ L+ C+ + A
Sbjct: 690 LHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAF 749
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +M +N+ ++ +NT++GG +G + A EM SG+E +++T++ LV G+
Sbjct: 750 ATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGH 809
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ + A+ +Y +M KGF P+ ST LI + + +A ++ K + K G+ PT
Sbjct: 810 GKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFK-DMQKRGVHPT 868
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G E K +M KGF PS S + K G A L K
Sbjct: 869 SCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLK 928
Query: 483 EMF 485
++
Sbjct: 929 NLY 931
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 112/240 (46%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +N + G F++ + + EM +G +PD +Y+ ++ C + +A KL
Sbjct: 552 PDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM+ +++ +++ YNT++ G G + +A+ EM +G SS+T ++ +
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ +D + ++ M G + + L+ LC +A +L+ ++ G+ P
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLE-EMLGSGIAPDTI 730
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI G C+ ++ A A+M+ + P++ ++ + G G + A + EM
Sbjct: 731 TFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 84/211 (39%), Gaps = 14/211 (6%)
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D S + L+ C R +R A L R VAYN ++ + + A A
Sbjct: 72 DPASLNALLYSHCRLRLLRPAIALLRSSRPT-----TVAYNILLAA---LSDHAHAPAVL 123
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI--EVLIGELC 398
EM GV VT L+ G CR G VD+A + + R G I LI C
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD---RGGGIHALDVIGWNTLIAGYC 180
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
AL + R+ GL Y L+ G C G+++ A V M G +P++
Sbjct: 181 RVGDTPAALSVAD-RMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
Y+ FI Y + VE A L + M N V
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMVRNGV 270
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 158/332 (47%), Gaps = 27/332 (8%)
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
L+ C E+ K + V I +++GL V ++T NALI + GK + ++ + +
Sbjct: 434 LMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTM 493
Query: 223 F--GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
G++ D+ T+N ++ G ++ E+ + +M R G +P
Sbjct: 494 LNKGIELDSI------------------TYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKP 535
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D ++++ L+ +C +M E L ++M+ + ++ D+V+Y TII G C+ ++ +A+E+
Sbjct: 536 DLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYL 595
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
E+ G++ + + L+ GY R GD+ AI M G +P T L+ +C
Sbjct: 596 TELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHA 655
Query: 401 RRVFEALDIL---KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
V EA I + V G+ Y +I+G C+ GKM EA+ EM +G P+
Sbjct: 656 GLVEEAKTIFSQARENNVDLGVI----GYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPN 711
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
Y+ + Y K GN E A+ L EM + V
Sbjct: 712 KLTYTTLMYAYSKSGNSEEASKLFDEMVGSGV 743
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 141/327 (43%), Gaps = 25/327 (7%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV-----FGLDSDATAGIGK 235
D R+L SRG + TCNA + + R + + E++ E+ L+ + + K
Sbjct: 170 ADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIK 229
Query: 236 DVKRVVRV---------------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
+ + +V +P V T+N LM + G E+ + M + G P
Sbjct: 230 ALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTP 289
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
++ +L+ R E + +EM V + V YN +IG C G ++A F
Sbjct: 290 SVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLF 349
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
EM L ++ ++VT+ + C+ G+++ A + DM G ++ L +
Sbjct: 350 DEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQR 409
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
R E++ + +V G+ P + ++ LC+ GK +EA+ + + + KG +L
Sbjct: 410 TRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLAT 469
Query: 461 YSAFIDG-----YMKEGNVEMATMLRK 482
+A I G YMKE + TML K
Sbjct: 470 SNALIHGLCEGKYMKEATKVIQTMLNK 496
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 114/231 (49%), Gaps = 7/231 (3%)
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
E V + EM G P+ + M C+ + +EA +W + +K + ++ N
Sbjct: 413 LESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNA 472
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G CE M A + + M G+E S+T+ ++ G C+ ++ AI ++ DM R+G
Sbjct: 473 LIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRG 532
Query: 383 FEPEGSTIEVLIGELCDKRRV---FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
F+P+ T L+ C+ ++ F LD +K GL P SY +I G C+ +
Sbjct: 533 FKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTE----GLQPDIVSYGTIIDGHCKAKDI 588
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+A + E++ +G +P++ IY+A I GY + G++ A + M N ++
Sbjct: 589 RKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQ 639
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 151/350 (43%), Gaps = 23/350 (6%)
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
L+LF+ +V ++ ++L+ K + +E+ E I+ ++S G++V N
Sbjct: 346 LRLFDEMV--LKKMKPTAVTYNLIAKALCKEGEMERAER---ILEDMLSIGMTVHCGLFN 400
Query: 201 ALI-WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYR 259
++ W + R + + S I E+ T G+ RPN A M +
Sbjct: 401 TVVAWLLQRTRRLESVVSITNEMV------TRGM----------RPNDPLMTACMRELCK 444
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ +W + G + + + L+ CE + M+EA K+ + M +K +E D +
Sbjct: 445 GGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSIT 504
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YN +I G C+ +M A + +M G + TF L++ YC G ++ + + M
Sbjct: 505 YNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMK 564
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+G +P+ + +I C + + +A + L ++ GL P Y LI G G +
Sbjct: 565 TEGLQPDIVSYGTIIDGHCKAKDIRKAKEYL-TELMDRGLKPNVFIYNALIGGYGRNGDI 623
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
A+ M G +P+ Y + + G VE A + + EN V
Sbjct: 624 SGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNV 673
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 80/152 (52%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV +NAL+ G+ R G D M G +P +Y LM C + EA+
Sbjct: 603 LKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAK 662
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ + R+ NV+ V+ Y +I G+C++G+M A +F EM G+ + +T+ L+ Y
Sbjct: 663 TIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAY 722
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
++G+ + A ++++M G P+ T LI
Sbjct: 723 SKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 754
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 114/240 (47%), Gaps = 6/240 (2%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+HTF + +G+ + D + ++ G P + + + ++ A ++++
Sbjct: 154 IHTF----ITSPAQGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFD 209
Query: 307 EMRD-KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EMR+ +NV + +Y +I C+ G++ E E+ +G++ + VT+ L++ C++
Sbjct: 210 EMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKS 269
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G V+ A + M + G P T +LI L R F + I+ + + G+ P E
Sbjct: 270 GRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGER-FGEVGIVLQEMEQLGVSPNEVI 328
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI C +G +AL++ EMV K +P+ Y+ KEG +E A + ++M
Sbjct: 329 YNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDML 388
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 111/287 (38%), Gaps = 51/287 (17%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLL------------------IKCCLEVKNIEKIETC 180
P L F L+ Y G F LL I + K+I K +
Sbjct: 535 PDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAK-- 592
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
+ + LM RGL V NALI R G ISG + +++ + GI
Sbjct: 593 -EYLTELMDRGLKPNVFIYNALIGGYGR-NGDISG-----AIDAVETMKSNGI------- 638
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+P T+ +LM G E+ + ++ + + Y++++ +C+ +M E
Sbjct: 639 ---QPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVE 695
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +EEMR + + + + Y T++ + + G A + F EM SGV ++T+ L+
Sbjct: 696 AVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIA 755
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+D I G T E+ G L R++ L
Sbjct: 756 RCSEVNSLDKDI--------------GHTAELSSGALTKDDRMYNIL 788
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 198/466 (42%), Gaps = 64/466 (13%)
Query: 85 PHLAL-RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL 143
PH ++ FF F + + ++ +Y + L+ + A+ +I + + + +
Sbjct: 97 PHRSIFAFFKFISSQPEFRFTVETYFVMARFLAIHEMFVEAQSLIELVVSRKGKNSASSV 156
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
F LV+ R F+ D L+ +++ I + C + R V + C L+
Sbjct: 157 FISLVEM-RGTPMCDFLVDALMITYMDLGFIPDVIQCFRLSR---KHNFVVPIRGCGNLL 212
Query: 204 WEVSR--GKGVISGY--EIYREVFGLD-----------------SDATAGIGKDVKRVVR 242
+ + G + G+ EI F L+ DA + KR
Sbjct: 213 DRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKR--S 270
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RP V +FN L+ G+ + G + + M + PD ++YS L+ C+E +M A
Sbjct: 271 LRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 303 KL-----------------------------------WEEMRDKNVEHDVVAYNTIIGGF 327
+L +++M K ++ D+V YNT++ GF
Sbjct: 331 RLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ G++ A M G+ VT+ L++G+CR GDVD+A+ + +M + G E +
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDR 450
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
LI +C + RV +A L+ +++ G+ P + +Y ++ C++G + K+
Sbjct: 451 VGFSALICGMCKEGRVIDAERALR-EMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLK 509
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
EM G P++ Y+ ++G K G ++ A ML M V +D
Sbjct: 510 EMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDD 555
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 1/229 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN F L+ G R G + +++ + +M G +PD Y+ L+ FC+ + A +
Sbjct: 343 PNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + + D V Y T+I GFC G++ A E +EM +G+E V F L+ G C+
Sbjct: 403 VDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCK 462
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G V A +M R G +P+ T +++ C K +LK + G P
Sbjct: 463 EGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLK-EMQSDGHIPNVV 521
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+Y L+ GLC+ G+M+ A + M+ G P Y+ ++G+ + N
Sbjct: 522 TYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHAN 570
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
+IV ++ RGL T LI RG V + EI +E +D + G ++ RV
Sbjct: 401 NIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKE---MDQN-----GIELDRV- 451
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
F+AL+ G +EG E EM R G +PD +Y+++M FC++ +
Sbjct: 452 -------GFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTG 504
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KL +EM+ +VV YN ++ G C++G+M A+ M GV +T+ L+ G
Sbjct: 505 FKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEG 564
Query: 362 YCRAGD 367
+ R +
Sbjct: 565 HHRHAN 570
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RP+ T+ L+ GF R G + ++ EM + G E D +S L+ C+E R+ +AE
Sbjct: 411 LRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAE 470
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EM ++ D V Y ++ FC+ G+ + +EM G + VT+ L+NG
Sbjct: 471 RALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGL 530
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ G + +A ++ + M G P+ T L+
Sbjct: 531 CKLGQMKNADMLLDAMLNVGVVPDDITYNTLL 562
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 156/322 (48%), Gaps = 21/322 (6%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV------------FGLDSDAT 230
++R++ RG+S V TC L+ + + ++ REV +G+ D
Sbjct: 283 VLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGY 342
Query: 231 AGIGK--DVKRV------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G+ D R+ V ++ N+ N L+ G+ + G + E V+V M +PDC
Sbjct: 343 CQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDC 402
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
YSY+ L+ +C E ++ +A L EEM + VV YNT+I G ++G A +
Sbjct: 403 YSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHL 462
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M GV + ++ +++ + + GD D A++++ ++ +GF +I LC +
Sbjct: 463 MVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGK 522
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ EA + R+ + GL P E +Y L G C+ G ++EA +++ M + S+E+Y+
Sbjct: 523 LMEAGAVFD-RMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYN 581
Query: 463 AFIDGYMKEGNVEMATMLRKEM 484
+ IDG K + T L EM
Sbjct: 582 SLIDGLFKIRKLNDVTDLLVEM 603
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 226/506 (44%), Gaps = 81/506 (16%)
Query: 19 KPQLLS--QFSTSSSTP--------PSDQSH-NLIATVVSLLTHHRSKSRWNHLLSLCRS 67
KP LLS Q S SS P ++ H L+ + LL +R +S N
Sbjct: 9 KPILLSLTQRSFHSSIPLQWKLRQETTNLPHPELLDRITRLLILNRPQSLHNLTFKY-SD 67
Query: 68 GLTPTQFSQIALGLKNNPHLALRFFSF-TQHKSLCKHSLSSYATIIHILSRARLIGPARD 126
LT + ++ L +P L FF TQ+ HSLS Y+ ++HIL+ ARL A
Sbjct: 68 HLTDSLLRRLRL----HPSACLSFFHLATQNSHYRPHSLS-YSILLHILTHARLFPEATT 122
Query: 127 VIR--VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIV 184
V+R + L N + + Y+E G VFD+L+K E + D
Sbjct: 123 VLRQLMDLHCTNNYRAYAVCNHVFSVYKEFGFCSGVFDMLMKAFAERGMTKHALYVFD-- 180
Query: 185 RMLMSR-GLSVKVSTCNALIWE-VSRGKGVIS--------GYEIYREVF--GLDSDATAG 232
MSR G + +C+ L+ + V +G+G ++ G I +V+ + +A
Sbjct: 181 --EMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQ 238
Query: 233 IGK-DV-----KRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+G+ DV +++V+ + PNV T+N L+ G+ G FE VE V M+ G + +
Sbjct: 239 VGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVT 298
Query: 285 YSVLMAVFCEERRMREAEKLWEEMR-DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
++LM +C++ +M EAEKL E+ D+ + D Y ++ G+C++G M A EM
Sbjct: 299 CTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEM 358
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G++ + V L+ GYC+ +G++C+ RV
Sbjct: 359 LRVGLKVNMVICNTLIKGYCK-----------------------------LGQVCEAERV 389
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
F + V + L P SY L+ G C EGK+ +A + EM+G G P++ Y+
Sbjct: 390 FVGM-------VDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNT 442
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQV 489
I G + G+ + A L M E V
Sbjct: 443 VIKGLVDVGSYDDALHLWHLMVERGV 468
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 113/272 (41%), Gaps = 36/272 (13%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
FN ++ G + G + V+ M LG PD +Y L +C+ ++EA ++ M
Sbjct: 510 FNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVME 569
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ + + YN++I G +I ++ + EM G+ + VT+ L++G+C +D
Sbjct: 570 RQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLD 629
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS---- 425
A +Y +M +GF P ++ L R+ EA IL +++ F +
Sbjct: 630 KAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILD-KMLDFDILAVHNKCSDK 688
Query: 426 -------------------------------YMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
Y I GLC+ GK++EA V + ++ +GF
Sbjct: 689 LVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGF 748
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
P Y I GNV+ A LR EM E
Sbjct: 749 LPDNFTYCTLIHACSVSGNVDEAFKLRDEMLE 780
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 125/279 (44%), Gaps = 36/279 (12%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ +N+L+ G ++ V D+ VEM G P+ +Y L++ +C+E+++ +A L+
Sbjct: 576 SIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLY 635
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM---------------------- 343
EM ++ +VV + I+ ++ A +M
Sbjct: 636 FEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLT 695
Query: 344 -------------GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
+ S+++ + ++G C++G +D A V + + +GF P+ T
Sbjct: 696 LEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTY 755
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
LI V EA L+ +++ GL P Y LI GLC+ G ++ A ++ ++
Sbjct: 756 CTLIHACSVSGNVDEAFK-LRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLY 814
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
KG P+ Y+ I Y + G+++ A+ LR++M E +
Sbjct: 815 QKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGI 853
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 51/106 (48%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+ L+ G ++ + EM G P+ Y+ L+ C+ + A++L
Sbjct: 750 PDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRL 809
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ ++ K + + V YN +IG +C IG++ +A +M G+ +
Sbjct: 810 FYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGIST 855
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 43/74 (58%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ +NAL+ G + G ++ + ++ ++ + G P+ +Y++L+ +C + +A +L
Sbjct: 785 PNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRL 844
Query: 305 WEEMRDKNVEHDVV 318
E+M ++ + ++
Sbjct: 845 REKMTEEGISTRII 858
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 129/561 (22%), Positives = 242/561 (43%), Gaps = 102/561 (18%)
Query: 17 KPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLS--LCRSGLTPTQF 74
+ KP+ L + TS+ + IAT+ +++ R K W + + L P
Sbjct: 20 QTKPKHL--YCTSAIQDNDVKDSQFIATLRNIV---RGKESWKIAFNDPFISTKLKPHHV 74
Query: 75 SQIALGLKNNPHLALRFFSFTQ-HKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALR 133
++ L ++ LALRFF+F HK+ HS S+ +IH L A L PA +++ L
Sbjct: 75 EKVLLLTLDDTRLALRFFNFLGLHKNF-NHSTMSFCILIHALVNANLFWPASSLLQTLLL 133
Query: 134 SPENDPKLKL-----------------FEVLVKTY----------------RECGSAP-- 158
DP+ F++L+++Y R+C P
Sbjct: 134 RGGLDPREVFEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQV 193
Query: 159 -----------------------------------FVFDLLIKCCLEVKNIEKIETCVDI 183
+++ +I+ E+KN K + ++
Sbjct: 194 RTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAK---EM 250
Query: 184 VRMLMSRGLSVKVSTC-------NALIWE---VSRG---KGVISGYEIY-REVFGL---- 225
++ + S L+V V N +WE + G KG+ + Y V GL
Sbjct: 251 IQRMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQ 310
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
+ + AG+ ++ + V P ++L+ G R+G D+ + ++G P + Y
Sbjct: 311 EFEVGAGVMDEMIELGFV-PTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVY 369
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ L+ C++ + EAE L++EM +K + + V Y+ +I FC G++ A F +M +
Sbjct: 370 NALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIM 429
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
+G++ + + L+NG+C+ G++ +A+ +++M KG +P + LI C+K ++ E
Sbjct: 430 AGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHE 489
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
A + K G+ P ++ LI L +M +A ++ EM+ + P+ Y+ I
Sbjct: 490 AFRLYHEMTGK-GIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMI 548
Query: 466 DGYMKEGNVEMATMLRKEMFE 486
+G+ KEGN A L +M +
Sbjct: 549 EGHCKEGNTVKAFELLNQMVQ 569
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 122/240 (50%), Gaps = 3/240 (1%)
Query: 237 VKRVVRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
V RV +V P++ +NAL+ ++G F++ E ++ EM G + +YS+L+ FC
Sbjct: 354 VNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCR 413
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
++ A +M ++ V YN++I G C++G ++ A FF EM G++ + V+
Sbjct: 414 RGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVS 473
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L++GYC G + A +Y++M KG P T LI L R+ +A + +
Sbjct: 474 YTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFD-EM 532
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
++ + P E +Y +I+G C+EG +A ++ +MV KG P Y I G V
Sbjct: 533 LEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRV 592
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 122/253 (48%), Gaps = 7/253 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ V+ +N+L+ G + G + EM G +P SY+ L++ +C + ++ EA
Sbjct: 432 IKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAF 491
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ EM K + + + T+I M A F EM + + VT+ ++ G+
Sbjct: 492 RLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGH 551
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA---LDILKARVVKFGL 419
C+ G+ A + N M +KG P+ T LI LC RV EA +D L K
Sbjct: 552 CKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKL-- 609
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
E Y L+ G C+EG++ +AL V EMV +G + L Y+ IDG +KE +
Sbjct: 610 --NEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFG 667
Query: 480 LRKEMFENQVRQE 492
L K M + ++R +
Sbjct: 668 LLKNMHDQRLRPD 680
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 125/242 (51%), Gaps = 3/242 (1%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
D+ A G+ K++ R+RP+ + +++ G+ + G+ +K +W M GC P+ +Y
Sbjct: 661 DTSAVFGLLKNMHDQ-RLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTY 719
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ L+ C+ M +AE LW+EM N + V Y + G M +A + +M L
Sbjct: 720 TTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM-L 778
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G+ +++V++ LV G+C+ G V+ A + ++M P+ T +I + C + +
Sbjct: 779 KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDG 838
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
A++ + K GL P +Y FLI G C G++ +A +++ +M+ +G +P+ + +
Sbjct: 839 AIEFWDTMLNK-GLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLS 897
Query: 466 DG 467
G
Sbjct: 898 HG 899
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 116/242 (47%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N ++ G +EG K ++ +M + G PD Y+Y L++ C R+ EA+K
Sbjct: 539 PNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKF 598
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++ ++ + + + Y+ ++ G+C+ G + A REM GV+ V + L++G +
Sbjct: 599 IDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIK 658
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D + + +M + P+ +I V +A I ++ G P
Sbjct: 659 EQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDI-MIDEGCTPNIV 717
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI LC+ G M++A + EM+ P+ Y F+D +EG++E A L +M
Sbjct: 718 TYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM 777
Query: 485 FE 486
+
Sbjct: 778 LK 779
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 15/246 (6%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N ++AL+ G+ +EG V EM + G + D Y+VL+ +E+ L
Sbjct: 610 NEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLL 669
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M D+ + D V Y ++I G+ + G + +A + M G + VT+ L+N C+A
Sbjct: 670 KNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKA 729
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL----DILKARVVKFGLFP 421
G +D A L++ +M P T + L + + +A+ D+LK GL
Sbjct: 730 GLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK------GLLA 783
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA---- 477
SY L++G C+ G++EEA K+ EM+ P YS I + GN++ A
Sbjct: 784 NTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFW 843
Query: 478 -TMLRK 482
TML K
Sbjct: 844 DTMLNK 849
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 3/198 (1%)
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
RR+ L+ E+ + D+ Y +I FCE+ A+A+E + M S + + V +
Sbjct: 207 RRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVY 264
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C+ V A+ + N + +KG T L+ LC K + FE + ++
Sbjct: 265 NVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLC-KVQEFEVGAGVMDEMI 323
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ G PTE + L++GL +GK+ +A + + G PSL +Y+A I+ K+G +
Sbjct: 324 ELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFD 383
Query: 476 MATMLRKEMFENQVRQED 493
A +L KEM E + D
Sbjct: 384 EAELLFKEMGEKGLCAND 401
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N ++N L+ GF + G E+ + EM PDC +YS ++ C + A + W
Sbjct: 784 NTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFW 843
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M +K ++ D +AYN +I G C GE+ +A E +M GV+ + T + L +G R
Sbjct: 844 DTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASR 902
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 128/236 (54%), Gaps = 5/236 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+V T++ LM G++ +K + V+ M+ +G PD ++Y++L+ FC+ + + EA
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEAL 359
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++EM KN+ +V Y+++I G C+ G + + EM G ++ +T+ L++G
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGL 419
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G +D AI ++N M +G P T +L+ LC R+ +A ++ + + K G
Sbjct: 420 CKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTK-GYHLN 478
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE----GNV 474
+Y +I G C++G +EEAL + ++M G P + I K+ GNV
Sbjct: 479 VYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENGGNV 534
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 149/307 (48%), Gaps = 45/307 (14%)
Query: 216 YEIYREVFGLDSDATA-GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
Y++ E +GL S+ T GI DV T++ L+ GF EG ++ + EM
Sbjct: 212 YQLVSEAYGLFSEMTVKGISADVV----------TYSTLIYGFCIEGKLKEAIGLLNEMV 261
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
P+ Y+Y++L+ C+E +++EA+ + M V+ DV+ Y+T++ G+ + E+
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVK 321
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
+A+ F M L GV T+ L+NG+C+ VD A+ ++ +M +K P T LI
Sbjct: 322 KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Query: 395 GELCDKRRVFEALDILK--------ARVVKF--------------------------GLF 420
LC R+ D++ A V+ + G+
Sbjct: 382 DGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIR 441
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P ++ L+ GLC+ G++++A +V +++ KG+ ++ Y+ IDG+ K+G +E A +
Sbjct: 442 PNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTM 501
Query: 481 RKEMFEN 487
+M +N
Sbjct: 502 LSKMEDN 508
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 164/362 (45%), Gaps = 22/362 (6%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM-LMSRGLSVKVS 197
P L +L+ + G F F +L K I K D V + + +GL +K
Sbjct: 92 PDLITLNILINCFCHMGQITFGFSVLAK-------ILKRGYPPDTVTLNTLIKGLCLKGQ 144
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRV---------RPNVH 248
AL + K + G+++ + +G + IG D + +++ +PNV
Sbjct: 145 VKKALHF---HDKLLAQGFQLNQVSYGTLINGVCKIG-DTRAAIKLLQKIDGRLTKPNVV 200
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++ ++ + + ++ EM G D +YS L+ FC E +++EA L EM
Sbjct: 201 MYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
K + +V YN ++ C+ G++ A+ M + V+ +T+ L++GY +V
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEV 320
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A V+N M G P+ T +LI C + V EAL++ K K + P +Y
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQK-NMVPGIVTYSS 379
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI GLC+ G++ + EM +G ++ YS+ IDG K G+++ A L +M +
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQG 439
Query: 489 VR 490
+R
Sbjct: 440 IR 441
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 1/252 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+R P + FN ++ F + + + + G +PD + ++L+ FC ++
Sbjct: 53 MRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITF 112
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ ++ + D V NT+I G C G++ +A F ++ G + + V++ L+N
Sbjct: 113 GFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLIN 172
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ GD +AI + + + +P +I LC + V EA + VK G+
Sbjct: 173 GVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVK-GIS 231
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y LI G C EGK++EA+ + EMV K P++ Y+ +D KEG V+ A +
Sbjct: 232 ADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 481 RKEMFENQVRQE 492
M + V+ +
Sbjct: 292 LAVMLKACVKPD 303
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 98/196 (50%), Gaps = 1/196 (0%)
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G +PD ++ ++L+ FC ++ + ++ + D + + T+I G C G++ +A
Sbjct: 956 GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
F ++ G + + V++ L+NG C+ GD +AI + + + +P+ +I
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC + V +A + VK G+ +Y LI G C GK++EA+ + +MV K P
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVK-GISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134
Query: 457 SLEIYSAFIDGYMKEG 472
++ Y+ +D KEG
Sbjct: 1135 NVRTYNILVDALCKEG 1150
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 3/213 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
P+ TF L+ G +G K ++ G + + SY L+ C+ R A K
Sbjct: 993 HPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIK 1052
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L ++ + + DVV YNTII C+ +++A F EM + G+ + VT+ L+ G+C
Sbjct: 1053 LLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFC 1112
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD--KRRVFEALDILKARVVKFGLFP 421
G + AI + N M K P T +L+ LC K + E+L +L +++ G
Sbjct: 1113 IVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSML-SKMEDNGCKA 1171
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
++ +I L E+ + ++ K+ EM+ +G
Sbjct: 1172 NAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 116/245 (47%), Gaps = 3/245 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P++ T N L+ F G + ++ + G PD +++ L+ C + ++ +A
Sbjct: 957 IQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKAL 1016
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ + + + V+Y T+I G C+IG+ A + R++ + V + +++
Sbjct: 1017 HFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDAL 1076
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ V A ++ +M KG + T LI C ++ EA+ +L V+K + P
Sbjct: 1077 CKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLK-TINPN 1135
Query: 423 EKSYMFLIKGLCEEGK--MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
++Y L+ LC+EGK ++E+L + ++M G + + + I ++ + L
Sbjct: 1136 VRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKL 1195
Query: 481 RKEMF 485
EM
Sbjct: 1196 LHEMI 1200
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 121/236 (51%), Gaps = 1/236 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R PNV T++ L+ G + + ++ M GC PD +Y++L+ C+E ++ A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++ EM D ++V YN+++ G C ++ A R+M G + VT+ L++G
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G V A + DM KG P+ +LI LC +V E++ +L+ R V G+ P
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLR-RAVSGGIKP 364
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y +I GLC +++EA ++ + +G P + +YS IDG K G V+ A
Sbjct: 365 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 420
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 162/347 (46%), Gaps = 34/347 (9%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDAT- 230
I++ + C D +R S+ L V C+ LI + + K I +R + G+ +D
Sbjct: 25 IDQAQRCFDEMR---SKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVI 81
Query: 231 -----AGIGKDVKRVVRV------------RPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
+G+ K+ KR+ + PNV T+N+L+ G + ++ ++++ M
Sbjct: 82 YTALLSGLWKE-KRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHM 140
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD--------VVAYNTIIG 325
+ C P +Y+ L+ ++ A L++EM D+ HD V+ Y+ +I
Sbjct: 141 KSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR-SHDMDDRCSPNVITYSVLID 199
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
G C+ +++A E M G +T+ LV+G C+ V +A V +M G P
Sbjct: 200 GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 259
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
T L+ LC RRV +AL +++ + G P +Y LI GLC+ G++++A +
Sbjct: 260 NLVTYNSLLHGLCRARRVSDALALMRDMTCR-GCTPNVVTYGTLIDGLCKVGRVKDACAM 318
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
A+M+ KG P L IY+ I+G K V+ + L + ++ +
Sbjct: 319 LADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 170/391 (43%), Gaps = 42/391 (10%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C +L +Y +++H L RAR + A ++R T R C
Sbjct: 257 CVPNLVTYNSLLHGLCRARRVSDALALMRDM------------------TCRGCTPNVVT 298
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
+ LI +V ++ + C + M+ +G + + N LI + + V + R
Sbjct: 299 YGTLIDGLCKVGRVK--DACAMLADMI-DKGGTPDLMIYNMLINGLCKADQVDESIALLR 355
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
+ GI +P+V T+++++ G R ++ + + + GC P
Sbjct: 356 RAV------SGGI----------KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPP 399
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D YS L+ C+ ++ EA L+E M + DVV Y+T+I G C+ G + A
Sbjct: 400 DVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLL 459
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
M G S++T+ L+ G C +D AI + +M R P T +LI +C
Sbjct: 460 ARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRM 519
Query: 401 RRVFEALDIL---KARVVKFGLFPTEK-SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
RV A+ +L KAR V G + +Y LI GLC+ G++ EAL EM+ G P
Sbjct: 520 ERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIP 579
Query: 457 SLEIYSAFIDGYMKEGNV-EMATMLRKEMFE 486
YS ++G K ++ E+ ++ +M +
Sbjct: 580 DHITYSILLEGLKKSKDLHELRHLVLDQMVQ 610
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 156/339 (46%), Gaps = 27/339 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV-----------FG 224
K+ +++R ++ G + T N+L+ + R + V + R++ +G
Sbjct: 241 KVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYG 300
Query: 225 LDSDATAGIGKDVKRVVRV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
D +G+ VK + P++ +N L+ G + ++ +
Sbjct: 301 TLIDGLCKVGR-VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS 359
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G +PD +YS ++ C R+ EA +L ++ + DV+ Y+T+I G C+ G++
Sbjct: 360 GGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDE 419
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A + + M G ++ VT+ L++G C+AG VD A L+ M R G P T LI
Sbjct: 420 AFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIK 479
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL----KVQAEMVG 451
LCD + EA+++++ + + P+ +Y LI G+C +++ A+ + +A V
Sbjct: 480 GLCDLNHLDEAIELVE-EMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVA 538
Query: 452 KGFEPSLEI-YSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G I YS+ IDG K G V A +EM +N V
Sbjct: 539 AGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGV 577
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 43/283 (15%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+V+T+ AL+ GF R G ++ + + EM P+ + S+L+ C+ +R +A +
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ M+ + D V Y ++ G + + +A EM G E + VT+ L++G C
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 364 RAGDVDSA---------------ILVYNDMCRKGF------------------------- 383
+ + D A ++ YN + F
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 384 --EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
P T VLI LC RV +A+++L++ + G P +Y L+ GLC+E K+
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKAR-GCSPDVITYTILVDGLCKESKVAA 244
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
A +V EM+ G P+L Y++ + G + V A L ++M
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM 287
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 41/250 (16%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C+PD Y+Y+ L+ FC + +A++ ++EMR KN+ +V + +I G C+ A
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
FR M SG+ + +V + L++G + +D A+ + ++M G EP T LI L
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 398 CDK------RRVFEAL-------DILKARVVKFGLFPTEK-------------------- 424
C + +FE + ++ + GLF T K
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184
Query: 425 --------SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
+Y LI GLC+ ++ +A+++ M +G P + Y+ +DG KE V
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244
Query: 477 ATMLRKEMFE 486
A + +EM +
Sbjct: 245 AWEVLREMLD 254
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 21/235 (8%)
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVH 248
SRG V + LI + + V +++Y + G DA +V
Sbjct: 394 SRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDA----------------DVV 437
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T++ L+ G + G ++ + M R+G P +Y+ L+ C+ + EA +L EEM
Sbjct: 438 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 497
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF-----REMGLSGVESSSVTFEHLVNGYC 363
N V YN +I G C + + A R + G ++ + L++G C
Sbjct: 498 ERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLC 557
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+AG V A+ + +M G P+ T +L+ L + + E ++ ++V+ G
Sbjct: 558 KAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLG 612
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 153/326 (46%), Gaps = 20/326 (6%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATA------- 231
V ++ L +RG ++ V CN ++ + V + R++ FG + D +
Sbjct: 177 VRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKG 236
Query: 232 --------GIGKDVKRVVRVR--PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
+ + ++ +VR+ PN+ TFN L+ R G FE+V +V +MA GC PD
Sbjct: 237 LCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPD 296
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
Y+ ++ C+E ++ A ++ M ++ +VV YNT++ G C EE
Sbjct: 297 IRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM VTF LV+ +C+ G VD I + M G P+ T +I C +
Sbjct: 357 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEG 416
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ EA+ +LK+ + G P SY ++KGLC + +A + ++M+ +G + +
Sbjct: 417 LIDEAVMLLKS-MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 475
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFEN 487
+ I+ K+G VE A L K+M N
Sbjct: 476 NTLINFLCKKGLVEQAIELLKQMLVN 501
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 143/322 (44%), Gaps = 20/322 (6%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD---SDATAGIGKD-- 236
+I+ + S GL V N L+ + + E+ E+F D D T I D
Sbjct: 318 EILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFF 377
Query: 237 -----VKRVVRV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
V RV+ + P+V T+ ++ GF +EG ++ + M GC+P+
Sbjct: 378 CQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNT 437
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
SY++++ C R +AE L +M + + + +NT+I C+ G + +A E ++
Sbjct: 438 ISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ 497
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M ++G +++ +++G +AG D A+ + N M KG P + L + R
Sbjct: 498 MLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGR 557
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ + + + + + Y +I LC+ G+ E A++ A MV G P+ Y+
Sbjct: 558 INKVIQMFD-NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYT 616
Query: 463 AFIDGYMKEGNVEMATMLRKEM 484
I G EG V+ A + E+
Sbjct: 617 ILIRGLASEGFVKEAQEMLTEL 638
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 109/253 (43%), Gaps = 1/253 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V PN +T+ ++ G V EM R GC P Y V++ C R
Sbjct: 116 VPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRS 175
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A ++ E++ + DV N ++ C+ G + +A R++ G E V++ ++
Sbjct: 176 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLK 235
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C A + +M R P T LI LC + +FE + + A++ + G
Sbjct: 236 GLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLC-RNGLFERVHEVLAQMAEHGCT 294
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P + Y +I G+C+EG ++ A ++ M G +P++ Y+ + G E L
Sbjct: 295 PDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 354
Query: 481 RKEMFENQVRQED 493
EMF+ +D
Sbjct: 355 LAEMFDKDCPLDD 367
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 105/239 (43%), Gaps = 21/239 (8%)
Query: 146 VLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
+L+K+ CG P + +++K + + E+ D++ ++ +G + T N LI
Sbjct: 423 MLLKSMTACGCKPNTISYTIVLK---GLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLI 479
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
+ + V E+ +++ V P++ +++ ++ G + G
Sbjct: 480 NFLCKKGLVEQAIELLKQML----------------VNGCSPDLISYSTVIDGLGKAGKT 523
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
++ ++ M G P+ YS + + E R+ + ++++ ++D + D V YN +
Sbjct: 524 DEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAV 583
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
I C+ GE RA EF M SG + T+ L+ G G V A + ++C KG
Sbjct: 584 ISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 80/225 (35%), Gaps = 68/225 (30%)
Query: 320 YNTIIGGFCEIGEM--------------------------------ARAEEFFREMGLSG 347
YN ++ G+C G++ A A EM G
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 152
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ ++ CR G SA+ V D+ +G + +++ +CD+ V +AL
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKAL 212
Query: 408 DILKARVVKFGLFPTEKSYMFLIKG----------------------------------- 432
+L+ + FG P SY ++KG
Sbjct: 213 HLLR-DLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 271
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
LC G E +V A+M G P + +Y+ IDG KEG++++A
Sbjct: 272 LCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVA 316
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ +V GYCRAG ++SA + + P T ++ LC + R+ +AL +L +
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLD-EM 148
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ G P Y +++ C G A++V ++ +G + + ++ +G+V
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 208
Query: 475 EMATMLRKEM 484
+ A L +++
Sbjct: 209 DKALHLLRDL 218
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 121/236 (51%), Gaps = 1/236 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R PNV T++ L+ G + + ++ M GC PD +Y++L+ C+E ++ A
Sbjct: 108 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 167
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++ EM D ++V YN+++ G C ++ A R+M G + VT+ L++G
Sbjct: 168 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 227
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G V A + DM KG P+ +LI LC +V E++ +L+ R V G+ P
Sbjct: 228 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLR-RAVSGGIKP 286
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y +I GLC +++EA ++ + +G P + +YS IDG K G V+ A
Sbjct: 287 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 342
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 128/242 (52%), Gaps = 3/242 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+N+L+ G + ++ ++++ M + C P +Y+ L+ ++ A L
Sbjct: 8 PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMAL 67
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++EM D+ HDV+++N ++ G C G++ A EFFR+M + +T+ L++G C+
Sbjct: 68 FQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYSVLIDGLCK 125
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A V A+ + M +G P+ T +L+ LC + +V A ++L+ ++ G P
Sbjct: 126 ANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLR-EMLDAGCVPNLV 184
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L+ GLC ++ +AL + +M +G P++ Y IDG K G V+ A + +M
Sbjct: 185 TYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADM 244
Query: 485 FE 486
+
Sbjct: 245 ID 246
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 114/240 (47%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ L+ G +E +V EM GC P+ +Y+ L+ C RR+ +A L
Sbjct: 146 PDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALAL 205
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M + +VV Y T+I G C++G + A +M G + + L+NG C+
Sbjct: 206 MRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCK 265
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A VD +I + G +P+ T +I LC R+ EA +L V G P
Sbjct: 266 ADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL-LYVKSRGCPPDVI 324
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI GLC+ GK++EA + M G G + + YS IDG K G V+ A +L M
Sbjct: 325 LYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARM 384
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 153/351 (43%), Gaps = 53/351 (15%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
++ V+++ + +RG S V T L+ + + V + +E+ RE+ LD+
Sbjct: 127 NRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREM--LDAGCV---- 180
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
PN+ T+N+L+ G R + +M GC P+ +Y L+ C+
Sbjct: 181 ----------PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 230
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R+++A + +M DK D++ YN +I G C+ ++ + R G++ VT
Sbjct: 231 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 290
Query: 355 FEH-----------------------------------LVNGYCRAGDVDSAILVYNDMC 379
+ L++G C+AG VD A +Y M
Sbjct: 291 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMT 350
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
G + + T LI LC RV EA +L AR+V+ G P+ +Y LIKGLC+ +
Sbjct: 351 GDGCDADVVTYSTLIDGLCKAGRVDEA-HLLLARMVRMGTPPSTMTYNSLIKGLCDLNHL 409
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM-LRKEMFENQV 489
+EA+++ EM PS Y+ I G + V+ A + +EM +N V
Sbjct: 410 DEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGV 460
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 109/208 (52%), Gaps = 3/208 (1%)
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
GCEP+ +Y+ L+ C+ A++L+E M+ +V YNT++ G G++ RA
Sbjct: 5 GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
F+EM L ++F LV G CRAG +++A+ + M + P T VLI
Sbjct: 65 MALFQEM-LDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDG 122
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC RV +A+++L++ + G P +Y L+ GLC+E K+ A +V EM+ G P
Sbjct: 123 LCKANRVSQAVELLESMKAR-GCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 181
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+L Y++ + G + V A L ++M
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDM 209
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 152/356 (42%), Gaps = 40/356 (11%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C +L +Y +++H L RAR + A ++R T R C
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDM------------------TCRGCTPNVVT 220
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
+ LI +V ++ + C + M+ +G + + N LI + + V + R
Sbjct: 221 YGTLIDGLCKVGRVK--DACAMLADMI-DKGGTPDLMIYNMLINGLCKADQVDESIALLR 277
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
A +G ++P+V T+++++ G R ++ + + + GC P
Sbjct: 278 R-------AVSG---------GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPP 321
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D YS L+ C+ ++ EA L+E M + DVV Y+T+I G C+ G + A
Sbjct: 322 DVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLL 381
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
M G S++T+ L+ G C +D AI + +M R P T +LI +C
Sbjct: 382 ARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRM 441
Query: 401 RRV-FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK-VQAEMVGKGF 454
RV ALD + ++ G+ P +Y L++GL + + E V +MV G+
Sbjct: 442 ERVDSAALDYFQ-EMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGY 496
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P +Y LI GLC+ + + A ++ M PS+ Y+ +DG + G +E A
Sbjct: 5 GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64
Query: 478 TMLRKEMFENQ 488
L +EM + +
Sbjct: 65 MALFQEMLDRR 75
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 201/459 (43%), Gaps = 48/459 (10%)
Query: 67 SGLTPTQFSQIALGL----KNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIG 122
+GL P F+ +L + + + A + F+ K C+ + +Y +IH L AR I
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG-CRRNEVAYTHLIHGLCVARRID 305
Query: 123 PARDVIRVALRSPENDPKLKLFEVLVKTY----------------RECGSAPFV--FDLL 164
A D+ V ++ E P ++ + VL+K+ E G P + + +L
Sbjct: 306 EAMDLF-VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 165 IKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI---------------WEVSR 208
I C + K E +++ ++ +GL V T NALI E+
Sbjct: 365 IDSLCSQCK----FEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 209 GKGVISGYEIYREVFG--LDSDATAGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAFEK 265
+ + Y E+ S+ +G K + R V P+V T+N+L+ G R G F+
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
+ M G PD ++Y+ ++ C+ +R+ EA L++ + K V +VV Y +I
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
G+C+ G++ A +M +S+TF L++G C G + A L+ M + G +P
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
ST +LI L A + +++ G P +Y I+ C EG++ +A +
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQ-QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
A+M G P L YS+ I GY G A + K M
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 217/493 (44%), Gaps = 58/493 (11%)
Query: 2 AVQILKHIIFSVSKPKPKPQLLSQFSTSSS---TPPSDQSHNLIATVVSLLTHHRSKSRW 58
A ++LK FS P P QF + S P ++S ++ +V L SK W
Sbjct: 19 AFEVLKKK-FSTDVTVPSPVTRRQFCSVSPLLRNLPEEESDSM--SVPHRLLSILSKPNW 75
Query: 59 NHLLSLCR--SGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILS 116
+ SL S ++P+ S + L +P AL F + KHS+ SYA+++ +L
Sbjct: 76 HKSPSLKSMVSAISPSHVSSL-FSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLI 134
Query: 117 RARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEK 176
+G V ++ L +++K+ G A +V DL C ++ E+
Sbjct: 135 NNGYVGV---VFKIRL-------------LMIKSCDSVGDALYVLDL----CRKMNKDER 174
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
E ++ + N L+ ++R V ++Y E+ +D
Sbjct: 175 FELKYKLI-----------IGCYNTLLNSLARFGLVDEMKQVYMEML-----------ED 212
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
+V PN++T+N ++ G+ + G E+ ++ G +PD ++Y+ L+ +C+ +
Sbjct: 213 -----KVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ A K++ EM K + VAY +I G C + A + F +M + T+
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L+ C + A+ + +M G +P T VLI LC + + +A ++L ++++
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL-GQMLE 386
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
GL P +Y LI G C+ G +E+A+ V M + P+ Y+ I GY K NV
Sbjct: 387 KGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHK 445
Query: 477 ATMLRKEMFENQV 489
A + +M E +V
Sbjct: 446 AMGVLNKMLERKV 458
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 18/264 (6%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ ++P V T L+ ++G F+ + +M G +PD ++Y+ + +C E R+ +
Sbjct: 596 IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD 655
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
AE + +MR+ V D+ Y+++I G+ ++G+ A + + M +G E S TF L+
Sbjct: 656 AEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
Query: 361 G---------------YCRAGDV---DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
C ++ D+ + + M P + E LI +C+
Sbjct: 716 HLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGN 775
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ A + G+ P+E + L+ C+ K EA KV +M+ G P LE
Sbjct: 776 LRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCK 835
Query: 463 AFIDGYMKEGNVEMATMLRKEMFE 486
I G K+G E T + + + +
Sbjct: 836 VLICGLYKKGEKERGTSVFQNLLQ 859
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 18/239 (7%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TFNAL+ G +G ++ + +M ++G +P + ++L+ ++ A
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++M + D Y T I +C G + AE+ +M +GV T+ L+ GY
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIG---------------ELCDKRRV--FEAL 407
G + A V M G EP T LI ELC + F+ +
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV-GKGFEPSLEIYSAFI 465
L ++V+ + P KSY LI G+CE G + A KV M +G PS +++A +
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
Length = 495
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 193/407 (47%), Gaps = 47/407 (11%)
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL 143
+P LA R F + + +H++ +Y ++ L + AR K+
Sbjct: 16 SPKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKAR----------------KI 59
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
F+ ++ Y+EC + + ++++ + + K + +++++ + S+ L+ N L+
Sbjct: 60 FDDML--YKECLPNIYTYGIVLR---GLCDDAKTDAALELLQDMESKMLTPTTFIVNMLV 114
Query: 204 WEVSRGKGVISGYEIYREV---FGLDSDA----TAGIGK--DVKRVVRV---------RP 245
+ + V + YE+Y+ + LD + T G+ K + R + V P
Sbjct: 115 SCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVP 174
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEM--ARLGCE--PDCYSYSVLMAVFCEERRMREA 301
++ T+N L+ G+ R G E+ + EM + G + PD YSY+ +++ FC+ R++ A
Sbjct: 175 SLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTA 234
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ M +VV +NT++ G C G++ A F M E ++VT+ L+ G
Sbjct: 235 RYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITG 294
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ RA +D A + DM R+G EP T LIG LCD +V +AL+ILK R+ G P
Sbjct: 295 HARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILK-RMSSTGREP 353
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGK---GFEPSLEIYSAFI 465
+Y +I LC+ G++E A K+ + +G +P YS I
Sbjct: 354 NVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTII 400
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 111/244 (45%), Gaps = 4/244 (1%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
V T+NA + + G K ++ +M C P+ Y+Y +++ C++ + A +L
Sbjct: 36 TVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELL 95
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++M K + N ++ C+ G++ A E ++ + +++ L G C+A
Sbjct: 96 QDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLS-DECSLDRISYNMLTYGLCKA 154
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV-KFG--LFPT 422
+D A+ V+ +M P T L+ C R+ +A+ +L+ + K G + P
Sbjct: 155 DQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPD 214
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY +I G C+ ++ A V M+ G P++ ++ +DG G ++ A + +
Sbjct: 215 MYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFE 274
Query: 483 EMFE 486
M E
Sbjct: 275 YMVE 278
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
R ++ EH V YN + + G ++A + F +M + T+ ++ G C
Sbjct: 29 RQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKT 88
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D+A+ + DM K P + +L+ LC +V A ++ K + L SY
Sbjct: 89 DAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSL--DRISYNM 146
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
L GLC+ +++ AL V EM PSL Y+ + GY + G +E A L +EM E +
Sbjct: 147 LTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGK 206
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 109/273 (39%), Gaps = 53/273 (19%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSP-------------------ENDPKLKLF 144
+ SY T+I +AR + AR V+R ++S + D +F
Sbjct: 214 DMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMF 273
Query: 145 EVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKI-ETCVDIVRMLMSRGLSVKVSTCNALI 203
E +V+ R C + +LI I+K + VD++R RG+ V T ALI
Sbjct: 274 EYMVE--RNCEPTAVTYTVLITGHARALRIDKANDYFVDMLR----RGVEPNVYTYTALI 327
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
+ V EI + + + G++ PNV T+ ++ + G
Sbjct: 328 GGLCDANKVEDALEILKRM--------SSTGRE--------PNVVTYTRVIGALCKGGQI 371
Query: 264 EKVEDVWVEM--ARLG-CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA- 319
E+ ++ + +R C+PD Y+YS ++ C + + EA + + M VE +VA
Sbjct: 372 ERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRM----VESKLVAK 427
Query: 320 ---YNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
Y + G + E + E E G+E
Sbjct: 428 PHIYKAMADGLELVQETEKVERVCLEASAHGIE 460
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 187/425 (44%), Gaps = 44/425 (10%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSL---CKHSLSSYATIIHILSRARLIGPAR 125
+TP ++ L N LA RFF + + + C H++ S+ T++ L++ R
Sbjct: 63 VTPDVAERVLERLDNAGMLAYRFFEWARKQRRGGGCAHTVRSFHTVVASLAKIRQYQLMW 122
Query: 126 DVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVR 185
DV+ + R + ++ F ++++ Y +K++ V
Sbjct: 123 DVVAIMRR--QGVVNVETFGIIMRKYARA--------------------QKVDEAVYTFN 160
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
++ G+ ++ N+L+ + + K V EI+ ++ G R P
Sbjct: 161 VMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNG-----------------RFSP 203
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+ T++ L+ G+ R K+ V+ +M GC+PD +Y +++ C+ R+ EA +
Sbjct: 204 DAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVV 263
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++M + + Y+ ++ + + A F +M G+ V + LV +C+
Sbjct: 264 QDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKV 323
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
D+A V +DM G P T +++ +L + EA + + R++K P +
Sbjct: 324 KKFDNAFRVMDDMEGHGITPNSRTWNIILNKLISLGKDDEAYRVFR-RMIK-RCQPDSDT 381
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +IK CE ++E ALKV M K F PS+ +S I+G +G V A +L ++M
Sbjct: 382 YTMMIKMFCENDRLEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMI 441
Query: 486 ENQVR 490
E +R
Sbjct: 442 EKGIR 446
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 22/228 (9%)
Query: 143 LFEVLVKTYRECGSAPFVFDLLIKCC-LEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
+F V T R C F++ +L+ +E++ + + T +D + G+ V NA
Sbjct: 260 VFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLD----MQKDGIVPDVVVYNA 315
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
L+ + K + + + D G G + PN T+N ++ G
Sbjct: 316 LVTAFCKVKKFDNAFRVM--------DDMEGHG--------ITPNSRTWNIILNKLISLG 359
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
++ V+ M + C+PD +Y++++ +FCE R+ A K+W+ MR K + ++
Sbjct: 360 KDDEAYRVFRRMIK-RCQPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQFLPSMHTFS 418
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+I G C+ GE+++A +M G+ TF L + G D
Sbjct: 419 VLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKD 466
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 131/245 (53%), Gaps = 1/245 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++N+++ GF++EG + + + EM+ G P+ +++ L+ FC+ RM A ++ EM
Sbjct: 592 SYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEM 651
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ K+++ DV AY +I GFC+ +M A F E+ G+ + + +L++G+ G +
Sbjct: 652 KSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKM 711
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D+AI +Y M G + T +I L + A D L + ++ G+ P E Y+
Sbjct: 712 DAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASD-LYSELLALGIVPDEILYVV 770
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
L+ GL ++G+ A K+ EM K P++ IYS I G+ +EGN+ A + EM E
Sbjct: 771 LVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKG 830
Query: 489 VRQED 493
+ +D
Sbjct: 831 LVHDD 835
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 132/279 (47%), Gaps = 37/279 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV +N +M+ R + ++ EM G +P+ ++YS+L+ F + + + A
Sbjct: 480 IEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAW 539
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF----------------------- 339
++ +M N E + V YNTII G C++G+ ++A+E
Sbjct: 540 EVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDG 599
Query: 340 -------------FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
+REM +G+ + VTF L+NG+C++ +D A+ + ++M K + +
Sbjct: 600 FFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLD 659
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
LI C K + A + + +++ GL P Y LI G GKM+ A+ +
Sbjct: 660 VPAYGALIDGFCKKNDMKTAYTLF-SELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLY 718
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+MV G L Y+ IDG +K+GN+ +A+ L E+
Sbjct: 719 KKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELL 757
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 119/283 (42%), Gaps = 45/283 (15%)
Query: 248 HTF--NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
H F N + + ++G + M G EP+ Y+ +M C + M A ++
Sbjct: 448 HGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIF 507
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM +K ++ + Y+ +I GF + + A E +M S E++ V + ++NG C+
Sbjct: 508 SEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKV 567
Query: 366 ------------------------------------GDVDSAILVYNDMCRKGFEPEGST 389
GD DSA+ Y +M G P T
Sbjct: 568 GQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVT 627
Query: 390 IEVLIGELCDKRRVFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
LI C R+ AL++ +K++ +K + +Y LI G C++ M+ A +
Sbjct: 628 FTSLINGFCKSNRMDLALEMIHEMKSKDLKLDV----PAYGALIDGFCKKNDMKTAYTLF 683
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+E++ G P++ +Y+ I G+ G ++ A L K+M + +
Sbjct: 684 SELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGI 726
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%)
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
R E +++ L+ + RRM A + M D+NV V N ++ +
Sbjct: 162 RFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLID 221
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
A+E + +M L GV +VT + L+ R + A+ ++ + +G EP+G + +
Sbjct: 222 EAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAV 281
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
C + + ALD+L+ K G+ ++++Y +I +EG MEEA+KV+ EMVG G
Sbjct: 282 QAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGI 341
Query: 455 EPSLEIYSAFIDGY 468
S+ ++ I G+
Sbjct: 342 PMSVIAATSLITGF 355
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 131/305 (42%), Gaps = 23/305 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K E + I R +MSRG + + + K ++ ++ RE+
Sbjct: 254 KPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREM------------- 300
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ V + T+ +++V +EG E+ V EM G + + L+ FC
Sbjct: 301 --REKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNG 358
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ +A + M ++ + D V ++ +I FC+ EM +A E ++ M G+ SSV
Sbjct: 359 NELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLV 418
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFE---PEGSTIEVLIGELCDKRRVFEALDILKA 412
++ G +A ++A+ ++ND FE G + LC + +V A L+
Sbjct: 419 HKMIQGCLKAESPEAALEIFND----SFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRM 474
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
K G+ P Y ++ C M+ A + +EM+ KG +P+ YS IDG+ K
Sbjct: 475 MENK-GIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQ 533
Query: 473 NVEMA 477
+ + A
Sbjct: 534 DEQNA 538
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 115/249 (46%), Gaps = 2/249 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
V P V N ++ R ++ ++++ +M +G D + +LM ER+ EA
Sbjct: 199 NVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEA 258
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-GLSGVESSSVTFEHLVN 360
K++ + + E D + ++ + C++ ++ A + REM GV +S T+ ++
Sbjct: 259 MKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIV 318
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
+ G+++ A+ V ++M G LI C+ + +ALD R+ + GL
Sbjct: 319 ACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFN-RMEEEGLA 377
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P + + +I+ C+ +ME+A+++ M G PS + I G +K + E A +
Sbjct: 378 PDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEI 437
Query: 481 RKEMFENQV 489
+ FE +
Sbjct: 438 FNDSFETWI 446
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 172 KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA 231
+N+ K++ +D+ + +++ G+S + T +I + + +I ++Y E+ L
Sbjct: 706 RNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALG----- 760
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+ P+ + L+ G ++G F + + EM + P+ YS ++A
Sbjct: 761 -----------IVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAG 809
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
E + EA ++ +EM +K + HD +N ++ G E
Sbjct: 810 HHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSGRVE 847
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 182/391 (46%), Gaps = 48/391 (12%)
Query: 136 ENDPKLKLFEVLVKTYRECGSAPFVFDL-----LIKCCLEVKNIEKIETCVDIVRMLMSR 190
E P L + E+ K Y E A V + L +C EK + I+R +MS+
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYS---IIREMMSK 474
Query: 191 GLSVKVST--------CNA-------LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
G ST CNA L++E + V+ +++ +DS G+ +
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP--DVFTYTILIDSFCKVGLLQ 532
Query: 236 DVKR----VVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
++ +VR PNV T+ AL+ + + +++ M GC P+ +Y+ L+
Sbjct: 533 QARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALI 592
Query: 290 AVFCEERRMREAEKLWEEMR---------------DKNV-EHDVVAYNTIIGGFCEIGEM 333
C+ ++ +A +++ MR D N+ + ++ Y ++ G C+ ++
Sbjct: 593 DGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKV 652
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
A + M + G E + + ++ L++G+C+ G +D A +V+ M +G+ P T L
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSL 712
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
I L +R+ AL +L +R+++ P Y +I GLC+ GK +EA ++ + M KG
Sbjct: 713 IDRLFKDKRLDLALKVL-SRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKG 771
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P++ Y+A IDG+ K G V+ L ++M
Sbjct: 772 CHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 198/475 (41%), Gaps = 57/475 (12%)
Query: 35 SDQSHNLIATVVSLLTHHRSKS-RWNHLLSLCRS---GLTPTQFSQIALGLKNNPHL--A 88
SD N+ + H K+ RW L+L L ++Q+ GL A
Sbjct: 259 SDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEA 318
Query: 89 LRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
+ F S + S C ++ +Y ++ R R +G + ++ + + + P ++F L+
Sbjct: 319 MDFLSRMRSSS-CIPNVVTYRILLCGCLRKRQLGRCKRILSMMI-TEGCYPSRRIFNSLI 376
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
Y G + + LL +K+ C G N LI +
Sbjct: 377 HAYCRSGDYSYAYKLL----------KKMGDC----------GCQPGYVVYNILIGGICG 416
Query: 209 GKGV--ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
+ + + E+ + +G DA VV + NV + G G FEK
Sbjct: 417 NEKLPSLDVLELAEKAYGEMLDA---------HVVLNKVNVSNLARCLCG---AGKFEKA 464
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ EM G PD +YS ++ + C ++ A L+EEM+ +V DV Y +I
Sbjct: 465 YSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDS 524
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
FC++G + +A ++F EM G + VT+ L++ Y +A + SA ++ M +G P
Sbjct: 525 FCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584
Query: 387 GSTIEVLIGELCDKRRVFEALDIL-----KARVVKFGLF----------PTEKSYMFLIK 431
T LI C ++ +A I A + ++ P +Y L+
Sbjct: 585 VVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVD 644
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
GLC+ K++EA + M +G EP+ +Y A IDG+ K G ++ A M+ +M E
Sbjct: 645 GLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 190/450 (42%), Gaps = 53/450 (11%)
Query: 79 LGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND 138
L L NP L ++FF + + H+ Y ++ +L +R +R + +
Sbjct: 136 LSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLR-EIRDEDKE 194
Query: 139 PKLKLFEVLVKT----------------YRECGSAP--FVFDLLIKCCLEVKNIEKIETC 180
KL VL++ ++ G P ++ L++ LE ++++T
Sbjct: 195 ILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEA---DRLDTA 251
Query: 181 VDIVRMLMSRGLSVKVSTCNA---LIWEVSRGKGVISGYEIYREVFGLD----SDATAGI 233
+ R + G ++ T L+ + R + ++ E +E F LD + +G+
Sbjct: 252 YLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIE--KEEFKLDTVIYTQMISGL 309
Query: 234 G------KDVKRVVRVR-----PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+ + + R+R PNV T+ L+ G R+ + + + M GC P
Sbjct: 310 CEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSR 369
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC------EIGEMARA 336
++ L+ +C A KL ++M D + V YN +IGG C + + A
Sbjct: 370 RIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELA 429
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
E+ + EM + V + V +L C AG + A + +M KGF P+ ST +IG
Sbjct: 430 EKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC+ +V A +L + + P +Y LI C+ G +++A K EMV G P
Sbjct: 490 LCNASKVDNAF-LLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
++ Y+A I Y+K + A E+FE
Sbjct: 549 NVVTYTALIHAYLKARKMSSAN----ELFE 574
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 5/250 (2%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
DV V PN ++AL+ GF + G ++ + V+ +M+ G P+ Y+YS L+ ++
Sbjct: 660 DVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKD 719
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+R+ A K+ M + + +V+ Y +I G C++G+ A M G + VT+
Sbjct: 720 KRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTY 779
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++G+ +AG VD + + M KG P T VLI C + +A +L +
Sbjct: 780 TAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE--M 837
Query: 416 KFGLFPTEKS-YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
K +P + Y +I+G E + +L + E+ P + Y ID + K G +
Sbjct: 838 KQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRL 895
Query: 475 EMATMLRKEM 484
E+A L K M
Sbjct: 896 ELALELHKXM 905
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 113/287 (39%), Gaps = 45/287 (15%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ T+NAL+ F + V EM+ G D Y+ + + C+ R REA
Sbjct: 229 KPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALA 288
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT--------- 354
L E+ + + D V Y +I G CE A +F M S + VT
Sbjct: 289 LIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCL 345
Query: 355 --------------------------FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
F L++ YCR+GD A + M G +P
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFG------LFPTEKSYMFLIKGLCEEGKMEEA 442
+LIG +C ++ +LD+L+ +G + + + L + LC GK E+A
Sbjct: 406 VYNILIGGICGNEKL-PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKA 464
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ EM+ KGF P YS I V+ A +L +EM N V
Sbjct: 465 YSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV 511
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 117/248 (47%), Gaps = 1/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P HT ++ G +E ++V+M GCEP+ Y+Y+ L++ C ++ A
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 375
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ M V + V YN +I E + A MG +G + VT+ ++ GY
Sbjct: 376 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY 435
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C GD A+LV N+M ++G T +I CD AL IL + G P
Sbjct: 436 CILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL-MRDGGCKPD 494
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E SY LI G C+ KME A + EMV G P+ Y+A IDGY K+ ++ AT L +
Sbjct: 495 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 554
Query: 483 EMFENQVR 490
M + R
Sbjct: 555 HMKRSGCR 562
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+N ++ G+ G +K V M + G + +Y+ ++ +C+ A ++
Sbjct: 423 PNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI 482
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ MRD + D +Y +I GFC+I +M A F EM G+ + VT+ L++GYC+
Sbjct: 483 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 542
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+D+A + M R G P T VLI L K+ F + L +++ G+FP
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL-TKQNNFSGAEELCKVMIEEGIFPNVV 601
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I GLC+ G AL++ +M+ +G P+L YS+ I +EG VE A L E+
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 1/245 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV+T+ AL+ G G + ++ M+R G P+ +Y+ L+ + E RR++ A +
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M ++V YN +I G+C +G+ +A M G ++ VT+ ++ GYC
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G+ SA+ + + M G +P+ + LI C ++ A + +V GL P E
Sbjct: 473 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFN-EMVDDGLCPNEV 531
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C++ K++ A + M G P+++ Y+ I G K+ N A L K M
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 485 FENQV 489
E +
Sbjct: 592 IEEGI 596
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 6/212 (2%)
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
++YS L+ + M + V+ +++ YN +I C+ G +A AE ++
Sbjct: 181 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 240
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
+ S + + T+ ++ G+CR D+DSA+ V+N M ++G EP T LI LCD R
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 300
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
V EA D+++ ++ G+ PT + I LC+ G E+A ++ +M KG EP++ Y+
Sbjct: 301 VNEAFDLIREMILH-GILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 359
Query: 463 AFIDGYMKEGNVEMAT-----MLRKEMFENQV 489
A I G G +++A M R +F N V
Sbjct: 360 ALISGLCVSGLLKVAIGLFHRMSRDGVFPNTV 391
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 21/291 (7%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK--DVKRV 240
++ ++ RG S + T N +I GY DS T + D+ R
Sbjct: 447 VMNNMLQRGHSANLVTYNT----------IIKGY--------CDSGNTTSALRILDLMRD 488
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+P+ ++ L+ GF + E ++ EM G P+ +Y+ L+ +C++ ++
Sbjct: 489 GGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDT 548
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L E M+ +V YN +I G + + AEE + M G+ + VT+ +++
Sbjct: 549 ATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMID 608
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ G A+ ++N M +G P T LI L + +V EA ++ A + + GL
Sbjct: 609 GLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF-AELERHGLI 667
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
P E +Y+ +I+ GK+E A M+ G +P+L Y I G E
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 147/325 (45%), Gaps = 24/325 (7%)
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
LIK C + E + + + ML GL + + +AL+ +SR
Sbjct: 151 LIKSC---HSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSR--------------L 193
Query: 224 GLDSDATAGIGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
G+ TA + R++ V+PN+ +NA++ ++G E + ++ PD
Sbjct: 194 GM----TAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPD 249
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
++Y+ ++ C + + A +++ +M + E + V Y+T+I G C+ G + A + R
Sbjct: 250 TFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIR 309
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM L G+ ++ T + C G + A ++ DM KG EP T LI LC
Sbjct: 310 EMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG 369
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ A+ + R+ + G+FP +Y LI L E +++ A V M G P++ Y
Sbjct: 370 LLKVAIGLFH-RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTY 428
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFE 486
+ I GY G+ + A ++ M +
Sbjct: 429 NEMIKGYCILGDPKKAMLVMNNMLQ 453
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 1/245 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+R + ++AL++ R G V D + M G +P+ Y+ ++ C++ + +AE
Sbjct: 176 LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAE 235
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +++ + + D Y ++I G C ++ A + F +M G E ++VT+ L+NG
Sbjct: 236 TIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 295
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +G V+ A + +M G P T I LCD +E L + G P
Sbjct: 296 CDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG-CYEDAWRLFVDMKNKGCEPN 354
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI GLC G ++ A+ + M G P+ Y+A I+ ++ ++ A ++
Sbjct: 355 VYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLN 414
Query: 483 EMFEN 487
M N
Sbjct: 415 LMGRN 419
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 118/264 (44%), Gaps = 23/264 (8%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPNV T+N L+ G ++ F E++ M G P+ +Y+ ++ C+ A +
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ +M ++ +++ Y+++I + G++ AE F E+ G+ +T+ ++ Y
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL------CDKRRVF------------- 404
+G V+ A M + G +P T VLI L D+R
Sbjct: 682 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQ 741
Query: 405 ----EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+A+ ++ A++ + + + L+ L G+ EA ++ M+ +G P E
Sbjct: 742 TTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEA 801
Query: 461 YSAFIDGYMKEGNVEMATMLRKEM 484
Y++ + ++ NV++A + K M
Sbjct: 802 YNSLLCSLLRVRNVDLAMGVFKHM 825
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 143/357 (40%), Gaps = 76/357 (21%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
EK++T ++ + G V T N LI +++ + SG E +V +
Sbjct: 544 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK-QNNFSGAEELCKVMIEEG------- 595
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+ PNV T+ A++ G + G+ +++ +M GC P+ +YS L+ +
Sbjct: 596 --------IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E ++ EAE L+ E+ + D + Y +I + G++ A F M +G + + T
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707
Query: 355 FEHLVNG----YCRAGDVDSAILVYNDMCRKGFEPE-----------------GSTIEV- 392
+ L+ G Y A +A+ C G++ G +++V
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 393 --LIGELCDKRRVFEALDILKARVVKFGLFPTEKSY------------------MF---- 428
L+ L R FEA ++L + + + GL P +++Y +F
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQ-GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 826
Query: 429 -------------LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
LI LC+ + +EA M+ + + P + + IDG +++G
Sbjct: 827 TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 38/99 (38%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +N+L+ R + V+ M+ GCE Y L+ C+ R +EA
Sbjct: 797 PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARIT 856
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+E M + D V +I G G EF M
Sbjct: 857 FENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM 895
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 200/471 (42%), Gaps = 76/471 (16%)
Query: 79 LGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIG-----------PARDV 127
L L+ + ALRFF + + H+ +Y T+I IL RA++ R++
Sbjct: 190 LNLQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREI 249
Query: 128 IRVAL--------RSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLE--VKNIEKI 177
R L RS L+ F ++ +E G P + D L VKN +K+
Sbjct: 250 TRSMLHSFVMSYGRSGRFKESLEAFNLM----KEMGYEPGLIDTAYNSVLVSLVKN-KKL 304
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
+ ++ +++ G+S CN L + +I + + ++ DA + +
Sbjct: 305 DMAENLFAQMINNGVS-----CNNLTY-----TSMIQCFFLKEKM----EDAMKLLDDMI 350
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
+ P+V T+ ++ + E+ V +M GCEP+ Y+Y+ L+ C RR
Sbjct: 351 QN--NYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRR 408
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
EA +L M V ++ Y + G C++ + RA+E F E G++ + VT+
Sbjct: 409 PEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNT 468
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRV-------- 403
L+NGYCR + A+ + +M + P+ T LI +L D R+
Sbjct: 469 LLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKG 528
Query: 404 ----FEALDILK---ARVVKF-------------GLFPTEKSYMFLIKGLCEEGKMEEAL 443
F+ L+IL ARV G + Y I L G+MEEA
Sbjct: 529 YDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQ 588
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
+ EM+ KG+ P+L Y+ I G+ ++G ++ A + M EN + + G
Sbjct: 589 ALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTG 639
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 140/309 (45%), Gaps = 22/309 (7%)
Query: 147 LVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
+++ RE G P + ++ LI+ V+ + E +++V ++ G+ + T L
Sbjct: 380 VLQKMRENGCEPNIYTYNALIQGLCAVR---RPEEALELVTLMEQGGVPPNIYTYTILTH 436
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ + + + E++ E ++PN T+N L+ G+ R
Sbjct: 437 GLCKLRRLDRAKEMFNEALARG----------------LKPNRVTYNTLLNGYCRGSRLI 480
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ D+ EM + C PD +Y+ L+ + ++ +A ++ +EM +K + + N +
Sbjct: 481 EAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILA 540
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G +G A F+R M G S+ + ++ AG+++ A + +M KG+
Sbjct: 541 RGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYS 600
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P +T +I C + R+ +A D + +++ G+ P SY LIK +G+ ++A +
Sbjct: 601 PNLTTYNTMIKGFCRQGRLDDA-DAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQ 659
Query: 445 VQAEMVGKG 453
+ A + +G
Sbjct: 660 LYATALERG 668
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+N ++ GF R+G + + + M G PD SY++L+ F + R ++A++L
Sbjct: 601 PNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQL 660
Query: 305 WEEMRDKNV 313
+ ++ V
Sbjct: 661 YATALERGV 669
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +T+N L+ G G V +M R GC PD +Y++L+ C+ ++A KL
Sbjct: 154 PDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKL 213
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EMR K D++ YN ++ G C+ G + A EF + + G E ++V++ ++ G C
Sbjct: 214 LDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCT 273
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A + A + +M +KG+ P T +LI LC + V A+++L ++ K+G P
Sbjct: 274 AERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLD-QIPKYGCTPNSL 332
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
SY ++ C++ KM+ A+ MV +G P + Y+ + + G V+ A L ++
Sbjct: 333 SYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 392
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 1/245 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV TFN L+ R G E +V ++ + GC P+ SY+ ++ FC++++M A
Sbjct: 294 PNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF 353
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M + D+V+YNT++ C GE+ A E ++ G +++ +++G +
Sbjct: 354 VELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTK 413
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG A+ + N+M KG +P+ T + LC + R+ EA+ +V G+ P
Sbjct: 414 AGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAF-CKVQDMGIRPNTV 472
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y ++ GLC+ + A+ + M+ G P+ Y+ I+G EG V+ A L E+
Sbjct: 473 LYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGEL 532
Query: 485 FENQV 489
V
Sbjct: 533 CSRGV 537
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 119/242 (49%), Gaps = 1/242 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D R P++ T+N ++ G +EG + + + GCEP+ SY++++ C
Sbjct: 215 DEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTA 274
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R +AEKL EM K +VV +N +I C G + A E ++ G +S+++
Sbjct: 275 ERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSY 334
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++ +C+ +D A+ M +G P+ + L+ LC V A+++L ++
Sbjct: 335 NPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLH-QLK 393
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G P SY +I GL + GK +EAL++ EMV KG +P + YS G +E +E
Sbjct: 394 DKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIE 453
Query: 476 MA 477
A
Sbjct: 454 EA 455
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
+K++ + V +++SRG + + N L+ + RG V + E+ ++ D T
Sbjct: 345 KKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK--DKGCT---- 398
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
P + ++N ++ G + G ++ ++ EM G +PD +YS + + C
Sbjct: 399 ----------PVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCR 448
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E R+ EA + + +++D + + V YN I+ G C+ E A + F M +G + T
Sbjct: 449 EDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNEST 508
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
+ L+ G G V A + ++C +G +G
Sbjct: 509 YTILIEGLTYEGLVKEARELLGELCSRGVVSKG 541
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 67/173 (38%), Gaps = 36/173 (20%)
Query: 346 SGVESSSVTFEHL------VNGYCRAGDVDSAILVYNDMCRKGFEPEGST--IEVLIGEL 397
+GV +S H + G R GD++ A+ + M G EP + LI +L
Sbjct: 47 AGVAASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKL 104
Query: 398 C------DKRRVFEA--------------------LDILKARVVKFGLFPTEKSYMFLIK 431
C + RRV A LD + V + P +Y LI+
Sbjct: 105 CASGRTAEARRVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIR 164
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
GLC G+ AL V +M+ +G P + Y+ ++ K + A L EM
Sbjct: 165 GLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 217
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 182/391 (46%), Gaps = 48/391 (12%)
Query: 136 ENDPKLKLFEVLVKTYRECGSAPFVFDL-----LIKCCLEVKNIEKIETCVDIVRMLMSR 190
E P L + E+ K Y E A V + L +C EK + I+R +MS+
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYS---IIREMMSK 474
Query: 191 GLSVKVST--------CNA-------LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
G ST CNA L++E + V+ +++ +DS G+ +
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP--DVFTYTILIDSFCKVGLLQ 532
Query: 236 DVKR----VVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
++ +VR PNV T+ AL+ + + +++ M GC P+ +Y+ L+
Sbjct: 533 QARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALI 592
Query: 290 AVFCEERRMREAEKLWEEMR---------------DKNV-EHDVVAYNTIIGGFCEIGEM 333
C+ ++ +A +++ MR D N+ + ++ Y ++ G C+ ++
Sbjct: 593 DGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKV 652
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
A + M + G E + + ++ L++G+C+ G +D A +V+ M +G+ P T L
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSL 712
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
I L +R+ AL +L +R+++ P Y +I GLC+ GK +EA ++ + M KG
Sbjct: 713 IDRLFKDKRLDLALKVL-SRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKG 771
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P++ Y+A IDG+ K G V+ L ++M
Sbjct: 772 CHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 198/475 (41%), Gaps = 57/475 (12%)
Query: 35 SDQSHNLIATVVSLLTHHRSKS-RWNHLLSLCRS---GLTPTQFSQIALGLKNNPHL--A 88
SD N+ + H K+ RW L+L L ++Q+ GL A
Sbjct: 259 SDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEA 318
Query: 89 LRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
+ F S + S C ++ +Y ++ R R +G + ++ + + + P ++F L+
Sbjct: 319 MDFLSRMRSSS-CIPNVVTYRILLCGCLRKRQLGRCKRILSMMI-TEGCYPSRRIFNSLI 376
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
Y G + + LL +K+ C G N LI +
Sbjct: 377 HAYCRSGDYSYAYKLL----------KKMGDC----------GCQPGYVVYNILIGGICG 416
Query: 209 GKGV--ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
+ + + E+ + +G DA VV + NV + G G FEK
Sbjct: 417 NEKLPSLDVLELAEKAYGEMLDA---------HVVLNKVNVSNLARCLCG---AGKFEKA 464
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ EM G PD +YS ++ + C ++ A L+EEM+ +V DV Y +I
Sbjct: 465 YSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDS 524
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
FC++G + +A ++F EM G + VT+ L++ Y +A + SA ++ M +G P
Sbjct: 525 FCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584
Query: 387 GSTIEVLIGELCDKRRVFEALDIL-----KARVVKFGLF----------PTEKSYMFLIK 431
T LI C ++ +A I A + ++ P +Y L+
Sbjct: 585 VVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVD 644
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
GLC+ K++EA + M +G EP+ +Y A IDG+ K G ++ A M+ +M E
Sbjct: 645 GLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 190/450 (42%), Gaps = 53/450 (11%)
Query: 79 LGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND 138
L L NP L ++FF + + H+ Y ++ +L +R +R + +
Sbjct: 136 LSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLR-EIRDEDKE 194
Query: 139 PKLKLFEVLVKT----------------YRECGSAP--FVFDLLIKCCLEVKNIEKIETC 180
KL VL++ ++ G P ++ L++ LE ++++T
Sbjct: 195 ILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEA---DRLDTA 251
Query: 181 VDIVRMLMSRGLSVKVSTCNA---LIWEVSRGKGVISGYEIYREVFGLD----SDATAGI 233
+ R + G ++ T L+ + R + ++ E +E F LD + +G+
Sbjct: 252 YLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIE--KEEFKLDTVIYTQMISGL 309
Query: 234 G------KDVKRVVRVR-----PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+ + + R+R PNV T+ L+ G R+ + + + M GC P
Sbjct: 310 CEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSR 369
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC------EIGEMARA 336
++ L+ +C A KL ++M D + V YN +IGG C + + A
Sbjct: 370 RIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELA 429
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
E+ + EM + V + V +L C AG + A + +M KGF P+ ST +IG
Sbjct: 430 EKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC+ +V A +L + + P +Y LI C+ G +++A K EMV G P
Sbjct: 490 LCNASKVDNAF-LLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
++ Y+A I Y+K + A E+FE
Sbjct: 549 NVVTYTALIHAYLKARKMSSAN----ELFE 574
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 120/250 (48%), Gaps = 5/250 (2%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
DV V PN ++AL+ GF + G ++ + V+ +M+ G P+ Y+YS L+ ++
Sbjct: 660 DVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKD 719
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+R+ A K+ M + + +V+ Y +I G C++G+ A M G + VT+
Sbjct: 720 KRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTY 779
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++G+ +AG VD + + M KG P T VLI C + +A +L +
Sbjct: 780 TAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE--M 837
Query: 416 KFGLFPTEKS-YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
K +P + Y +I+G E + +L + E+ P + Y ID + K G +
Sbjct: 838 KQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRL 895
Query: 475 EMATMLRKEM 484
E+A L KEM
Sbjct: 896 ELALELHKEM 905
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 113/287 (39%), Gaps = 45/287 (15%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ T+NAL+ F + V EM+ G D Y+ + + C+ R REA
Sbjct: 229 KPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALA 288
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT--------- 354
L E+ + + D V Y +I G CE A +F M S + VT
Sbjct: 289 LIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCL 345
Query: 355 --------------------------FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
F L++ YCR+GD A + M G +P
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFG------LFPTEKSYMFLIKGLCEEGKMEEA 442
+LIG +C ++ +LD+L+ +G + + + L + LC GK E+A
Sbjct: 406 VYNILIGGICGNEKL-PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKA 464
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ EM+ KGF P YS I V+ A +L +EM N V
Sbjct: 465 YSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV 511
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 157/314 (50%), Gaps = 20/314 (6%)
Query: 190 RGLSVKVSTCNALIW------EVSRGKGVIS-------GYEIYREVFGLDSDATAGIGKD 236
+G+S V T + LI+ ++ G+++ +Y +D+ G K+
Sbjct: 228 KGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKE 287
Query: 237 VKRVVRV------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
K V+ V +P+V T++ LM G++ +K + V+ M+ +G PD ++Y++L+
Sbjct: 288 AKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN 347
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
FC+ + + EA L++EM KN+ +V Y+++I G C+ G + + EM G +
Sbjct: 348 GFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPA 407
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+T+ L++G C+ G +D AI ++N M + P T +L+ LC R+ +A ++
Sbjct: 408 DVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVF 467
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ + K G +Y +I G C++G +EEAL + ++M G P+ + I K
Sbjct: 468 QDLLTK-GYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFK 526
Query: 471 EGNVEMATMLRKEM 484
+ + A L ++M
Sbjct: 527 KDENDKAEKLLRQM 540
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 149/307 (48%), Gaps = 45/307 (14%)
Query: 216 YEIYREVFGLDSDATA-GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
Y++ E +GL S+ T GI DV T++ L+ GF EG ++ + EM
Sbjct: 212 YQLVSEAYGLFSEMTVKGISADVV----------TYSTLIYGFCIEGKLKEAIGLLNEMV 261
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
P+ Y+Y++L+ C+E +++EA+ + M V+ DV+ Y+T++ G+ + E+
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVK 321
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
+A+ F M L GV T+ L+NG+C+ VD A+ ++ +M +K P T LI
Sbjct: 322 KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Query: 395 GELCDKRRVFEALDILK--------ARVVKF-----------------GLF--------- 420
LC R+ D++ A V+ + LF
Sbjct: 382 DGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIR 441
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P ++ L+ GLC+ G++++A +V +++ KG+ ++ Y+ I+G+ K+G +E A +
Sbjct: 442 PNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTM 501
Query: 481 RKEMFEN 487
+M +N
Sbjct: 502 LSKMEDN 508
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 163/362 (45%), Gaps = 22/362 (6%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM-LMSRGLSVKVS 197
P L +L+ + G F F +L K I K D V + + +GL +K
Sbjct: 92 PDLITLNILINCFCHMGQITFGFSVLAK-------ILKRGYPPDTVTLNTLIKGLCLKGQ 144
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRV---------RPNVH 248
AL + K + G+++ + + + IG D + +++ +PNV
Sbjct: 145 VKKALHFH---DKLLAQGFQLNQVSYATLINGVCKIG-DTRGAIKLLRKIDGRLTKPNVE 200
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++ ++ + + ++ EM G D +YS L+ FC E +++EA L EM
Sbjct: 201 MYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
K + +V YN ++ C+ G++ A+ M + V+ +T+ L++GY +V
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEV 320
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A V+N M G P+ T +LI C + V EAL++ K K + P +Y
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQK-NMVPGIVTYSS 379
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI GLC+ G++ + EM +G + YS+ IDG K G+++ A L +M + +
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439
Query: 489 VR 490
+R
Sbjct: 440 IR 441
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 1/252 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+R P + FN ++ F + + + + G +PD + ++L+ FC ++
Sbjct: 53 MRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITF 112
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ ++ + D V NT+I G C G++ +A F ++ G + + V++ L+N
Sbjct: 113 GFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 172
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ GD AI + + + +P +I LC + V EA + VK G+
Sbjct: 173 GVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVK-GIS 231
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y LI G C EGK++EA+ + EMV K P++ Y+ +D KEG V+ A +
Sbjct: 232 ADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 481 RKEMFENQVRQE 492
M + V+ +
Sbjct: 292 LAVMLKACVKPD 303
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 86/172 (50%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + T+++L+ G + G V D+ EM G D +YS L+ C+ + A L
Sbjct: 372 PGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 431
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M+D+ + ++ + ++ G C+ G + A+E F+++ G + T+ ++NG+C+
Sbjct: 432 FNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCK 491
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
G ++ A+ + + M G P T E +I L K +A +L+ + +
Sbjct: 492 QGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIAR 543
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 242 RVRP-NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
R +P +V T+++L+ G + G ++ ++ +M P+ +++++L+ C+ R+++
Sbjct: 403 RGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKD 462
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A+++++++ K +V YN +I G C+ G + A +M +G ++ TFE ++
Sbjct: 463 AQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIII 522
Query: 361 GYCRAGDVDSAILVYNDMCRKGF 383
+ + D A + M +G
Sbjct: 523 ALFKKDENDKAEKLLRQMIARGL 545
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/476 (23%), Positives = 206/476 (43%), Gaps = 22/476 (4%)
Query: 3 VQILKHIIFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLL 62
V I + + + + P L F S++ D+ +V ++ R++ L
Sbjct: 31 VDIFRAMRLQIQLLRQLPSLFICFLASTNALFRDELKLSQPDLVDRISRLLVLRRFDALA 90
Query: 63 SLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIG 122
+L S + + L+ NP +L FF + + +SSY I+HILSRAR+
Sbjct: 91 NLSFS-FSNELMDLVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYK 149
Query: 123 PARDVIR-VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCV 181
R + + + N +++ LV YRE +P VFD+++K E K + K CV
Sbjct: 150 EVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVYAE-KGMTKFALCV 208
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
+ G + +CN+L+ + + +Y ++ L
Sbjct: 209 --FDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALG--------------- 251
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ P++ ++ ++ + +EG ++ + EM R CEP+ +Y+ L+ + + A
Sbjct: 252 -ILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGA 310
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+K+ M +K + + Y +I G+C+ G+M +AE+ F M + + L++
Sbjct: 311 KKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHA 370
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC AG VD A+ + + M + G + LI C V +A ++L + + L P
Sbjct: 371 YCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVL-VSMKDWNLKP 429
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
Y L+ G C++ +A K+ EM KG ++ Y+ + G+VE A
Sbjct: 430 DSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHA 485
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 230 TAGIGKDVKRV------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
TAG D R+ V ++ N N+L+ G+ + G K +V V M +PD Y
Sbjct: 373 TAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSY 432
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
Y+ L+ FC++ +A KL +EM +K V VV YNT++ +G + A + M
Sbjct: 433 GYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLM 492
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
GV + VT+ L++ + + G D A++++ D KGF + +I C ++
Sbjct: 493 HKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKL 552
Query: 404 FEALDIL 410
+A +I
Sbjct: 553 VQAQEIF 559
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K G P+ +S L+ L + G+ +AL V +M+ G P + Y+ ++ Y KEG V+
Sbjct: 214 KCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVD 273
Query: 476 MATMLRKEM 484
A KEM
Sbjct: 274 EAFNFVKEM 282
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 168/353 (47%), Gaps = 15/353 (4%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+Y ++ A + A D++R + P P ++ V + G P ++
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV--- 76
Query: 167 CCLEVKNIEKIETCVDIVRM-LMSRGL--SVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
VKN++ D+V + GL + ++ ++ E+ R G + Y +
Sbjct: 77 ----VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMER-SGFAANLVTYNTLI 131
Query: 224 -GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM-ARLGCEPD 281
GL S +G V + + P+ T+NA++ GF + G ++ EM R GC PD
Sbjct: 132 NGLSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
++YS+L+ C+ +R+A++L +EM K+ VVA+NT++ G+C+ ++ RA E
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
M G VT+ +++G CR GDVD + M +G +P+ T VL+ LC
Sbjct: 252 SSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKA 311
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
++ EA ++K R+++ G P +Y + GLC+ K++ A + + KG
Sbjct: 312 GKMVEACRLVK-RMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKG 363
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 5/242 (2%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARL-GCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+T+ L+ G + D+ EM + G P Y+ + C+ ++ EA ++ +
Sbjct: 19 YTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVK 78
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M+D + DVV +NT+I G C+ G + A++ EM SG ++ VT+ L+NG AG
Sbjct: 79 NMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG 138
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
A+LV M P+ T +I C + A L+ + G P +Y
Sbjct: 139 RSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTY 195
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVG-KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
LI GLC+ + +A ++ EM+G K S+ ++ +DGY K +++ A L M
Sbjct: 196 SILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSML 255
Query: 486 EN 487
E+
Sbjct: 256 EH 257
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 116/241 (48%), Gaps = 4/241 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P +N + + G + +V M C+PD +++ L+A C+ R+ EA+++
Sbjct: 52 PTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQV 111
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EM ++V YNT+I G G A + M + + T+ +++G+C+
Sbjct: 112 LDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCK 168
Query: 365 AGDVDSAILVYNDM-CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+G++D A +M R G P+ T +LI LC + +A ++L+ + + +
Sbjct: 169 SGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASV 228
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++ L+ G C+ ++ A ++ + M+ G P + YS IDG + G+V+ L ++
Sbjct: 229 VAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEK 288
Query: 484 M 484
M
Sbjct: 289 M 289
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 2/160 (1%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V FN L+ G+ + ++ ++ M GC PD +YS ++ C + + L
Sbjct: 227 SVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALL 286
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E+M + + DVV Y ++ G C+ G+M A + M G ++VT+ + +G C+
Sbjct: 287 EKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKI 346
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
+D A + + KG + E L+ L K+R+ +
Sbjct: 347 DKLDMANDLLTSIRDKGRVTDVVAFETLL--LSVKKRLLD 384
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREM-GLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
D Y ++ C GE+ A + REM G+ + + V+ C++G V A+ V
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
+M +P+ T LI LC R+ EA +L + + G +Y LI GL
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLD-EMERSGFAANLVTYNTLINGLS 135
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G+ EA+ V M G P + Y+A I G+ K G ++ A +EM
Sbjct: 136 SAGRSGEAVLV---MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEM 182
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T++ ++ G R G +K + +M GC+PD +Y+VL+ C+ +M EA +L
Sbjct: 261 PDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRL 320
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+ M + + V Y+ + G C+I ++ A + + G + V FE L+
Sbjct: 321 VKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 77/174 (44%), Gaps = 21/174 (12%)
Query: 152 RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
++C ++ F+ L+ + +++++ +++ ++ G + V T + +I + R
Sbjct: 222 KDCCASVVAFNTLVDGYCKAQDLDRAR---ELLSSMLEHGCAPDVVTYSTIIDGLCRCGD 278
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAFEKVEDVW 270
V G+ + K V R +P+V T+ L+ G + G + +
Sbjct: 279 VDKGFALLE-----------------KMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLV 321
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
M GC P+ +YS++ C+ ++ A L +RDK DVVA+ T++
Sbjct: 322 KRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 169/387 (43%), Gaps = 54/387 (13%)
Query: 108 YATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFE------VLVKTYRECGS---AP 158
Y I I S R P ALR N P L F +V + E G A
Sbjct: 226 YTYTIRIKSFCRTGRPY-----AALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRAR 280
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+FD +++CCL C D V+T N L+ + + V+ +
Sbjct: 281 ELFDEMLECCL----------CPD-------------VTTFNKLVHALCKKGFVLESERL 317
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+ +V +KR V PN+ TFN + G +EG+ ++ + ++R G
Sbjct: 318 FDKV--------------LKR--GVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGL 361
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
PD +Y+ ++ C + R+ EAE+ +M + E + YN+II G+C+ G + A
Sbjct: 362 RPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANR 421
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
++ G + T+ LVNG+C+ GD D A+ V+ D KG P LI LC
Sbjct: 422 ILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLC 481
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ + AL ++ K G P +Y +I GLC+ G + +A + + + KG P +
Sbjct: 482 QQGLILPALQLMNEMAEK-GCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDI 540
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y+ +DGY ++ ++ A L M+
Sbjct: 541 FTYNTLVDGYCRQLKLDSAIELVNRMW 567
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 170/364 (46%), Gaps = 29/364 (7%)
Query: 142 KLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC 199
+LF+ ++K G P F F++ I+ + ++++ V ++ + GL V T
Sbjct: 316 RLFDKVLKR----GVCPNLFTFNIFIQGLCKEGSLDR---AVRLLGCVSREGLRPDVVTY 368
Query: 200 NALIWEVSRGKGVISGYE-IYREVFG------------LDSDATAGIGKDVKRVVR---- 242
N +I + R V+ E +++ V G +D G+ D R+++
Sbjct: 369 NTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVF 428
Query: 243 --VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+P+ T+ +L+ GF ++G ++ V+ + G P Y+ L+ C++ +
Sbjct: 429 KGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILP 488
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +L EM +K + D+ YN II G C++G ++ A + G T+ LV+
Sbjct: 489 ALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVD 548
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
GYCR +DSAI + N M +G P+ T L+ LC + E ++I KA K G
Sbjct: 549 GYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEK-GCA 607
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y +I+ LC K+ EA+ + EM KG P + + I G+ K G+++ A L
Sbjct: 608 PNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGL 667
Query: 481 RKEM 484
+ M
Sbjct: 668 FRGM 671
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 7/260 (2%)
Query: 239 RVVRVRP------NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
R++R P N + ++ GFY G ++ +++ EM PD +++ L+
Sbjct: 246 RLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHAL 305
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C++ + E+E+L++++ + V ++ +N I G C+ G + RA + G+
Sbjct: 306 CKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDV 365
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ ++ G CR V A + M GFEP T +I C K V +A ILK
Sbjct: 366 VTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKD 425
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
V K G P E +Y L+ G C++G ++A+ V + +GKG PS+ +Y+ I G ++G
Sbjct: 426 AVFK-GFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQG 484
Query: 473 NVEMATMLRKEMFENQVRQE 492
+ A L EM E + +
Sbjct: 485 LILPALQLMNEMAEKGCKPD 504
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 121/239 (50%), Gaps = 1/239 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V+++NA+M G F + V++ M E D Y+Y++ + FC R A +L
Sbjct: 188 PSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRL 247
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M + VAY T++ GF E G+ RA E F EM + TF LV+ C+
Sbjct: 248 LRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCK 307
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G V + +++ + ++G P T + I LC + + A+ +L V + GL P
Sbjct: 308 KGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGC-VSREGLRPDVV 366
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y +I GLC + ++ EA + +MV GFEP+ Y++ IDGY K+G V A + K+
Sbjct: 367 TYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKD 425
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 123/282 (43%), Gaps = 43/282 (15%)
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
G+GK + RP++ +N L+ G ++G + EMA GC+PD ++Y++++
Sbjct: 461 GLGKGL------RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIING 514
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+ + +A L + K D+ YNT++ G+C ++ A E M G+
Sbjct: 515 LCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPD 574
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+T+ L+NG C+ + + ++ M KG P T +I LC+ ++V EA+D+L
Sbjct: 575 VITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLG 634
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEG---------------------------------- 437
K GL P S+ LI G C+ G
Sbjct: 635 EMKSK-GLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSE 693
Query: 438 --KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
M+ AL++ +EM G +P Y IDG+ K GNV
Sbjct: 694 QLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQG 735
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 112/214 (52%), Gaps = 2/214 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N L+ G + E+V +++ M GC P+ +Y+ ++ C +++ EA L
Sbjct: 573 PDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDL 632
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS-GVESSSVTFEHLVNGYC 363
EM+ K + DVV++ T+I GFC++G++ A FR M V ++ T+ +++ +
Sbjct: 633 LGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFS 692
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
++ A+ ++++M + G +P+ T VLI C V + L + K G P+
Sbjct: 693 EQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEK-GFIPSL 751
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
++ ++ LC E K++EA+ + MV K P
Sbjct: 752 TTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD 785
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 131/276 (47%), Gaps = 17/276 (6%)
Query: 224 GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE----GAFEKVEDVWVEMARLGCE 279
G SDA IG + + P++ T+N L+ G+ R+ A E V +W + G
Sbjct: 519 GCLSDANHLIGDAITK--GCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQ----GMT 572
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +Y+ L+ C+ + E ++++ M +K +++ YNTII C ++ A +
Sbjct: 573 PDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDL 632
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK-GFEPEGSTIEVLIGELC 398
EM G+ V+F L+ G+C+ GD+D A ++ M ++ +T ++I
Sbjct: 633 LGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFS 692
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
++ + AL + + + K G P +Y LI G C+ G + + K E + KGF PSL
Sbjct: 693 EQLNMKMALRLF-SEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSL 751
Query: 459 EIYSAFIDGYMKEGNVEMAT-----MLRKEMFENQV 489
+ ++ E V+ A M++K++ + V
Sbjct: 752 TTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTV 787
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 17/212 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K E ++I + + +G + + T N +I + K V ++ E+ + G+
Sbjct: 590 KSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEM------KSKGL-- 641
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAVFCE 294
P+V +F L+ GF + G + ++ M + +Y+++++ F E
Sbjct: 642 --------TPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSE 693
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ M+ A +L+ EM+ + D Y +I GFC+ G + + +F E G S T
Sbjct: 694 QLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTT 753
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
F ++N C V A+ + + M +K P+
Sbjct: 754 FGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD 785
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 125/244 (51%), Gaps = 1/244 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ V P+V T+N ++ G ++ +V + C PD +Y++L+ C+E + +
Sbjct: 210 MNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQ 269
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A KL +EMR+K + DVV YN +I G C+ G + A +F M G + + +T ++
Sbjct: 270 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILR 329
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
C G A + +DM RKG P T +LI LC + + A+DIL+ ++ G
Sbjct: 330 SMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILE-KMPMHGCT 388
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P SY L+ G C+E KM+ A++ MV +G P + Y+ + K+G V++A +
Sbjct: 389 PNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 448
Query: 481 RKEM 484
++
Sbjct: 449 LNQL 452
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N L+ GF +E ++ + M GC PD +Y+ L+ C++ ++ A ++
Sbjct: 389 PNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 448
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ K ++ YNT+I G ++G+ RA + EM G++ +T+ LV+G R
Sbjct: 449 LNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 508
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G VD AI ++D+ G P T ++ LC R+ A+D L A ++ PTE
Sbjct: 509 EGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL-AYMISKRCKPTEA 567
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+Y LI+G+ EG +EAL + E+ +G
Sbjct: 568 TYTILIEGIAYEGLAKEALDLLNELCSRGL 597
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 122/240 (50%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN L+ R+G + D+ +M GC P+ SY+ L+ FC+E++M A +
Sbjct: 354 PSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 413
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + D+V YNT++ C+ G++ A E ++ G +T+ +++G +
Sbjct: 414 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 473
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + AI + ++M RKG +P+ T L+ L + +V EA+ + G+ P
Sbjct: 474 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD-LEGLGIRPNAI 532
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y ++ GLC+ + + A+ A M+ K +P+ Y+ I+G EG + A L E+
Sbjct: 533 TYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 592
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 1/234 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNV T N ++ G + E + +M R GC P ++++L+ C + + A
Sbjct: 318 QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAID 377
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ E+M + ++YN ++ GFC+ +M RA E+ M G VT+ L+ C
Sbjct: 378 ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALC 437
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G VD A+ + N + KG P T +I L + A+ +L + + GL P
Sbjct: 438 KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD-EMRRKGLKPDI 496
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y L+ GL EGK++EA+K ++ G G P+ Y++ + G K + A
Sbjct: 497 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRA 550
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 117/228 (51%), Gaps = 4/228 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ +L+ GF R G +K V + + G PD +Y+VL++ +C+ + A ++
Sbjct: 147 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 206
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M NV DVV YNTI+ C+ G++ +A E +T+ L+ C+
Sbjct: 207 LDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCK 263
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
V A+ + ++M KG +P+ T VLI +C + R+ EA+ L + +G P
Sbjct: 264 ESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN-NMPSYGCQPNVI 322
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
++ +++ +C G+ +A K+ ++M+ KG PS+ ++ I+ ++G
Sbjct: 323 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQG 370
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 98/187 (52%), Gaps = 4/187 (2%)
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ + K E M + D++ ++I GFC IG+ +A + SG +T+
Sbjct: 130 LEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNV 189
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++GYC++G++D+A+ V + R P+ T ++ LCD ++ +A+++L R ++
Sbjct: 190 LISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD-RQLQK 245
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+P +Y LI+ C+E + +A+K+ EM KG +P + Y+ I+G KEG ++ A
Sbjct: 246 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEA 305
Query: 478 TMLRKEM 484
M
Sbjct: 306 IKFLNNM 312
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 9/229 (3%)
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
R G E M G PD + L+ FC + ++A + E + DV+
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
YN +I G+C+ GE+ A + M V VT+ ++ C +G + A+ V +
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 242
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+K P+ T +LI C + V +A+ +L K G P +Y LI G+C+EG+
Sbjct: 243 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNK-GSKPDVVTYNVLINGICKEGR 301
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFI-----DGYMKEGNVEMATMLRK 482
++EA+K M G +P++ ++ + G + ++ MLRK
Sbjct: 302 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK 350
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 127/295 (43%), Gaps = 39/295 (13%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C S+ ++ +I+ L R L+G A D++ E P C
Sbjct: 352 CSPSVVTFNILINFLCRQGLLGRAIDIL-------EKMP-----------MHGCTPNSLS 393
Query: 161 FD-LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
++ LL C E +K++ ++ + +++SRG + T N L+ + + V EI
Sbjct: 394 YNPLLHGFCKE----KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 449
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
+ L S + P + T+N ++ G + G E+ + EM R G +
Sbjct: 450 NQ---LSSKGCS-------------PVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 493
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +YS L++ E ++ EA K + ++ + + + YN+I+ G C+ + RA +F
Sbjct: 494 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 553
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
M + + T+ L+ G G A+ + N++C +G + S +V +
Sbjct: 554 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAV 608
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 168/353 (47%), Gaps = 15/353 (4%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+Y ++ A + A D++R + P P ++ V + G P ++
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV--- 76
Query: 167 CCLEVKNIEKIETCVDIVRM-LMSRGL--SVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
VKN++ D+V + GL + ++ ++ E+ R G + Y +
Sbjct: 77 ----VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMER-SGFAANLVTYNTLI 131
Query: 224 -GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM-ARLGCEPD 281
GL S +G V + + P+ T+NA++ GF + G ++ EM R GC PD
Sbjct: 132 NGLSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
++YS+L+ C+ +R+A++L +EM K+ VVA+NT++ G+C+ ++ RA E
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
M G VT+ +++G CR GDVD + M +G +P+ T VL+ LC
Sbjct: 252 SSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKA 311
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
++ EA ++K R+++ G P +Y + GLC+ K++ A + + KG
Sbjct: 312 GKMVEACRLVK-RMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKG 363
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 5/242 (2%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARL-GCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+T+ L+ G + D+ EM + G P Y+ + C+ ++ EA ++ +
Sbjct: 19 YTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVK 78
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M+D + DVV +NT+I G C+ G + A++ EM SG ++ VT+ L+NG AG
Sbjct: 79 NMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG 138
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
A+LV M P+ T +I C + A L+ + G P +Y
Sbjct: 139 RSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTY 195
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVG-KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
LI GLC+ + +A ++ EM+G K S+ ++ +DGY K +++ A L M
Sbjct: 196 SILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSML 255
Query: 486 EN 487
E+
Sbjct: 256 EH 257
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 116/241 (48%), Gaps = 4/241 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P +N + + G + +V M C+PD +++ L+A C+ R+ EA+++
Sbjct: 52 PTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQV 111
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EM ++V YNT+I G G A + M + + T+ +++G+C+
Sbjct: 112 LDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCK 168
Query: 365 AGDVDSAILVYNDM-CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+G++D A +M R G P+ T +LI LC + +A ++L+ + + +
Sbjct: 169 SGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASV 228
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++ L+ G C+ ++ A ++ + M+ G P + YS IDG + G+V+ L ++
Sbjct: 229 VAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEK 288
Query: 484 M 484
M
Sbjct: 289 M 289
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREM-GLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
D Y ++ C GE+ A + REM G+ + + V+ C++G V A+ V
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
+M +P+ T LI LC R+ EA +L + + G +Y LI GL
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLD-EMERSGFAANLVTYNTLINGLS 135
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G+ EA+ V M G P + Y+A I G+ K G ++ A +EM
Sbjct: 136 SAGRSGEAVLV---MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEM 182
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T++ ++ G R G +K + +M GC+PD +Y+VL+ C+ +M EA +L
Sbjct: 261 PDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRL 320
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+ M + + V Y+ + G C+I ++ A + + G + V FE L+
Sbjct: 321 VKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 76/174 (43%), Gaps = 21/174 (12%)
Query: 152 RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
++C ++ F+ L+ + +++++ +++ ++ G + V T + +I + R
Sbjct: 222 KDCCASVVAFNTLVDGYCKAQDLDRAR---ELLSSMLEHGCAPDVVTYSTIIDGLCRCGD 278
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAFEKVEDVW 270
V G+ + K V R +P+V T+ L+ G + G + +
Sbjct: 279 VDKGFALLE-----------------KMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLV 321
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
M GC P+ +YS++ C+ ++ A L +RDK DVVA+ ++
Sbjct: 322 KRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 155/329 (47%), Gaps = 20/329 (6%)
Query: 158 PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
P ++D I + +EK + D +++ G++ +LI R K V GYE
Sbjct: 350 PMMYDYFICVMSKEGAMEKAKALFD---GMITFGVTPGARAYASLIEGFFREKNVRKGYE 406
Query: 218 IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
+ E+ KR + + P +T+ + G G + ++ EM G
Sbjct: 407 LLVEI--------------KKRNIVISP--YTYGTAVKGMCSSGDLDGAYNIVKEMGASG 450
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C P+ Y+ L+ F ++ R +A ++ +EMR++ + D YN++I G + +M A
Sbjct: 451 CRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEAR 510
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
F EM +G + + T+ ++GY AG+ SA +M G P LI E
Sbjct: 511 SFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEY 570
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C K +V EA ++ +V+ G+ K+Y L+ GL + GK+ +A ++ EM GKG P
Sbjct: 571 CKKGKVIEACSAFRS-MVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPD 629
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ Y IDG+ K GN++ A+ + EM +
Sbjct: 630 VFSYGTLIDGFSKLGNMQKASSIFDEMVQ 658
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 181/422 (42%), Gaps = 53/422 (12%)
Query: 108 YATIIHILSRARLIGPARDVIRVALRSPEN--DPKLKLFEVLVKTYRECGSAPFVFDLLI 165
Y ++I LS+A+ + AR + L EN P + + Y E G D +
Sbjct: 493 YNSLIIGLSKAKKMDEARSFL---LEMVENGFKPDAFTYGAFISGYIEAGEFASA-DKYV 548
Query: 166 KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF-G 224
K LE I C ++ +G ++ C+A V +G ++ + Y + G
Sbjct: 549 KEMLECGVIPNKVLCTGLINEYCKKGKVIE--ACSAFRSMVEQG--ILGDAKTYTVLMNG 604
Query: 225 LDSDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
L + +++ +R + P+V ++ L+ GF + G +K ++ EM + G +
Sbjct: 605 LVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSN 664
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
Y++L+ FC + +A++L +EM K + V Y TII G+C+ G++A A + F
Sbjct: 665 VIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFD 724
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY-------------------------- 375
EM L G+ S + LV+G CR DV+ AI ++
Sbjct: 725 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGK 784
Query: 376 ----NDMCRKGFE--------PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
DM + + P T ++I LC K EA L + K L PT
Sbjct: 785 TELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLC-KEGNLEAAKELFHHMQKANLMPTV 843
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ G + G+ E V E++ G EP +YS I+ ++KEG A +L +
Sbjct: 844 ITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQ 903
Query: 484 MF 485
MF
Sbjct: 904 MF 905
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 187/489 (38%), Gaps = 95/489 (19%)
Query: 83 NNPHLALRFFSFTQHKSLCKHSLSSYA-----------------TIIHILSRARLIGPAR 125
++P L FF+ + + + L S++ +I ++ R +
Sbjct: 75 DDPSKLLSFFNLVDSQKVTEQKLDSFSFLALDLCNFGSIEKAHSVVIRMIERKWPVAEVW 134
Query: 126 DVIRVALRS--PENDPKLKLFEVLVKTYRECG---SAPFVFDLLIKCCLEVKNIEKIETC 180
I LR ++D ++ LF +L+ Y E G A FVF L++ + + C
Sbjct: 135 SSIVRCLREFVGKSDDRVLLFGILIDGYIEKGFLDEAVFVFSSTKD--LDLDLVPSLARC 192
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRG---KGVISGYEIYREVFGLD-SDATAGIGKD 236
++ L+ R L W+V +G + V+ + Y + G D + KD
Sbjct: 193 NHLLDALLKRNRL-------DLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKD 245
Query: 237 V---------------------KRVVRVR---PNVHTFNALMVGFYREGAFEKVEDVWVE 272
V K+ + + P+ ++N L+ G ++ E + + VE
Sbjct: 246 VLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVE 305
Query: 273 MARLGCEPDCYSYSVLM-----------------------------------AVFCEERR 297
M +G D +YS+L+ V +E
Sbjct: 306 MNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGA 365
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
M +A+ L++ M V AY ++I GF + + E E+ + S T+
Sbjct: 366 MEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGT 425
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
V G C +GD+D A + +M G P LI K R +A+ +LK + +
Sbjct: 426 AVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLK-EMREQ 484
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G+ P Y LI GL + KM+EA EMV GF+P Y AFI GY++ G A
Sbjct: 485 GIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASA 544
Query: 478 TMLRKEMFE 486
KEM E
Sbjct: 545 DKYVKEMLE 553
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 4/267 (1%)
Query: 224 GLDSDATAGIGKD-VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
G ++DA G+ + V + P ++ + + +EGA EK + ++ M G P
Sbjct: 328 GRNADAANGLVHEMVSHGFSIDPMMYDY--FICVMSKEGAMEKAKALFDGMITFGVTPGA 385
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+Y+ L+ F E+ +R+ +L E++ +N+ Y T + G C G++ A +E
Sbjct: 386 RAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKE 445
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
MG SG + V + L+ + + A+ V +M +G P+ LI L ++
Sbjct: 446 MGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKK 505
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ EA L +V+ G P +Y I G E G+ A K EM+ G P+ + +
Sbjct: 506 MDEARSFL-LEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCT 564
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQV 489
I+ Y K+G V A + M E +
Sbjct: 565 GLINEYCKKGKVIEACSAFRSMVEQGI 591
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 75/148 (50%), Gaps = 6/148 (4%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMA-----RLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
FNAL+ ++ G E D+ + + G +P+ +Y++++ C+E + A++L
Sbjct: 772 FNALINWVFKFGKTELTTDMINRLMDGSFDKFG-KPNDVTYNIMIDYLCKEGNLEAAKEL 830
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M+ N+ V+ Y +++ G+ ++G + F E+ +G+E ++ + ++N + +
Sbjct: 831 FHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLK 890
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEV 392
G A+++ + M K +G + +
Sbjct: 891 EGMTTKALVLLDQMFAKNAVDDGCKLSI 918
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 34/234 (14%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI-WEVSRGKGVISGYE 217
FV+ L+ C + ++E+ T + +G + + NALI W GK ++
Sbjct: 736 FVYTTLVDGCCRLNDVERAITIFET----NEKGCASSSAPFNALINWVFKFGKTELTTDM 791
Query: 218 IYR------EVFGLDSDATAGIGKDV----------------KRVVRVRPNVHTFNALMV 255
I R + FG +D T I D + + P V T+ +L+
Sbjct: 792 INRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLN 851
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G+ + G ++ V+ E+ G EPD YSV++ F +E +A L ++M KN
Sbjct: 852 GYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVD 911
Query: 316 D-----VVAYNTIIGGFCEIGEMARAEEFFREM-GLSGVESSSVTFEHLVNGYC 363
D + ++ GF ++GEM AE+ M L + SS E L+N C
Sbjct: 912 DGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIE-LINESC 964
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 173/363 (47%), Gaps = 37/363 (10%)
Query: 136 ENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSR--- 190
EN K FE+L + G +P F++ +LI+ C +I D +++ SR
Sbjct: 119 ENGNVSKGFELLAQM-ETMGVSPNVFIYTILIEACCRNGDI-------DQAKVMFSRMDD 170
Query: 191 -GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
GL+ +I + G+E+Y+++ ++V V PN++T
Sbjct: 171 LGLAANQYIYTIMINGFFKKGYKKDGFELYQKM----------------KLVGVLPNLYT 214
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N+L+ + R+G V+ E+++ G + +Y++L+ C + ++ +AE L E M+
Sbjct: 215 YNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMK 274
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
++ +N ++ G C G++ +A + ++ L G+ + VT+ L++G+ + G+
Sbjct: 275 RAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSS 334
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLFPTEKSY 426
+ +M +G P T +L+ D + +E ++K + GL P + +Y
Sbjct: 335 VVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMK----RIGLVPDQHTY 390
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI GLC +G M EA K+ MV +P+ IY+ I+GY KE N A +EM +
Sbjct: 391 GVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVK 450
Query: 487 NQV 489
N V
Sbjct: 451 NGV 453
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 126/243 (51%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R + +V++F + F G K ++ +M +G P+ + Y++L+ C + +A
Sbjct: 102 RTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQA 161
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ ++ M D + + Y +I GF + G E +++M L GV + T+ L+
Sbjct: 162 KVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITE 221
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YCR G + A V++++ ++G T +LIG LC K +V +A +L+ R+ + + P
Sbjct: 222 YCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLE-RMKRAHINP 280
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
T +++ L+ GLC G++++AL ++ G P+L Y+ I G+ K GN + + L
Sbjct: 281 TTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELV 340
Query: 482 KEM 484
+EM
Sbjct: 341 REM 343
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+ LM F R EK +++ M R+G PD ++Y VL+ C + M EA
Sbjct: 348 ISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEAS 407
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL++ M + +++ + V YNT+I G+C+ +A +F EM +GV + ++ +
Sbjct: 408 KLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQIL 467
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGS 388
C+ G A + +M G +P S
Sbjct: 468 CKDGKSIEAKRLLKEMTEAGLKPPES 493
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 39/195 (20%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
P L + +L+ + + G++ V +L VR + RG+S T
Sbjct: 315 PTLVTYNILISGFSKVGNSSVVSEL--------------------VREMEDRGISPSKVT 354
Query: 199 CNALIWEVSRGKGVISGYEIYREV--FGLDSDA-TAGI--------------GKDVKRVV 241
L+ R + YE++ + GL D T G+ K K +V
Sbjct: 355 YTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMV 414
Query: 242 --RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
++PN +N ++ G+ +E K EM + G P+ SY + + C++ +
Sbjct: 415 EMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSI 474
Query: 300 EAEKLWEEMRDKNVE 314
EA++L +EM + ++
Sbjct: 475 EAKRLLKEMTEAGLK 489
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 182/391 (46%), Gaps = 48/391 (12%)
Query: 136 ENDPKLKLFEVLVKTYRECGSAPFVFDL-----LIKCCLEVKNIEKIETCVDIVRMLMSR 190
E P L + E+ K Y E A V + L +C EK + I+R +MS+
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYS---IIREMMSK 474
Query: 191 GLSVKVST--------CNA-------LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
G ST CNA L++E + V+ +++ +DS G+ +
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP--DVFTYTILIDSFCKVGLLQ 532
Query: 236 DVKR----VVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
++ +VR PNV T+ AL+ + + +++ M GC P+ +Y+ L+
Sbjct: 533 QARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALI 592
Query: 290 AVFCEERRMREAEKLWEEMR---------------DKNV-EHDVVAYNTIIGGFCEIGEM 333
C+ ++ +A +++ MR D N+ + ++ Y ++ G C+ ++
Sbjct: 593 DGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKV 652
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
A + M + G E + + ++ L++G+C+ G +D A +V+ M +G+ P T L
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSL 712
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
I L +R+ AL +L +R+++ P Y +I GLC+ GK +EA ++ + M KG
Sbjct: 713 IDRLFKDKRLDLALKVL-SRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKG 771
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P++ Y+A IDG+ K G V+ L ++M
Sbjct: 772 CHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 198/475 (41%), Gaps = 57/475 (12%)
Query: 35 SDQSHNLIATVVSLLTHHRSKS-RWNHLLSLCRS---GLTPTQFSQIALGLKNNPHL--A 88
SD N+ + H K+ RW L+L L ++Q+ GL A
Sbjct: 259 SDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEA 318
Query: 89 LRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
+ F S + S C ++ +Y ++ R R +G + ++ + + + P ++F L+
Sbjct: 319 MDFLSRMRSSS-CIPNVVTYRILLCGCLRKRQLGRCKRILSMMI-TEGCYPSRRIFNSLI 376
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
Y G + + LL +K+ C G N LI +
Sbjct: 377 HAYCRSGDYSYAYKLL----------KKMGDC----------GCQPGYVVYNILIGGICG 416
Query: 209 GKGV--ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
+ + + E+ + +G DA VV + NV + G G FEK
Sbjct: 417 NEKLPSLDVLELAEKAYGEMLDA---------HVVLNKVNVSNLARCLCG---AGKFEKA 464
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ EM G PD +YS ++ + C ++ A L+EEM+ +V DV Y +I
Sbjct: 465 YSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDS 524
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
FC++G + +A ++F EM G + VT+ L++ Y +A + SA ++ M +G P
Sbjct: 525 FCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584
Query: 387 GSTIEVLIGELCDKRRVFEALDIL-----KARVVKFGLF----------PTEKSYMFLIK 431
T LI C ++ +A I A + ++ P +Y L+
Sbjct: 585 VVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVD 644
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
GLC+ K++EA + M +G EP+ +Y A IDG+ K G ++ A M+ +M E
Sbjct: 645 GLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 190/450 (42%), Gaps = 53/450 (11%)
Query: 79 LGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND 138
L L NP L ++FF + + H+ Y ++ +L +R +R + +
Sbjct: 136 LSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLR-EIRDEDKE 194
Query: 139 PKLKLFEVLVKT----------------YRECGSAP--FVFDLLIKCCLEVKNIEKIETC 180
KL VL++ ++ G P ++ L++ LE ++++T
Sbjct: 195 ILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEA---DRLDTA 251
Query: 181 VDIVRMLMSRGLSVKVSTCNA---LIWEVSRGKGVISGYEIYREVFGLD----SDATAGI 233
+ R + G ++ T L+ + R + ++ E +E F LD + +G+
Sbjct: 252 YLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIE--KEEFKLDTVIYTQMISGL 309
Query: 234 G------KDVKRVVRVR-----PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+ + + R+R PNV T+ L+ G R+ + + + M GC P
Sbjct: 310 CEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSR 369
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC------EIGEMARA 336
++ L+ +C A KL ++M D + V YN +IGG C + + A
Sbjct: 370 RIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELA 429
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
E+ + EM + V + V +L C AG + A + +M KGF P+ ST +IG
Sbjct: 430 EKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC+ +V A +L + + P +Y LI C+ G +++A K EMV G P
Sbjct: 490 LCNASKVDNAF-LLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
++ Y+A I Y+K + A E+FE
Sbjct: 549 NVVTYTALIHAYLKARKMSSAN----ELFE 574
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 120/250 (48%), Gaps = 5/250 (2%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
DV V PN ++AL+ GF + G ++ + V+ +M+ G P+ Y+YS L+ ++
Sbjct: 660 DVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKD 719
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+R+ A K+ M + + +V+ Y +I G C++G+ A M G + VT+
Sbjct: 720 KRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTY 779
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++G+ +AG VD + + M KG P T VLI C + +A +L +
Sbjct: 780 TAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE--M 837
Query: 416 KFGLFPTEKS-YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
K +P + Y +I+G E + +L + E+ P + Y ID + K G +
Sbjct: 838 KQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRL 895
Query: 475 EMATMLRKEM 484
E+A L KEM
Sbjct: 896 ELALELHKEM 905
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 113/287 (39%), Gaps = 45/287 (15%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ T+NAL+ F + V EM+ G D Y+ + + C+ R REA
Sbjct: 229 KPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALA 288
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT--------- 354
L E+ + + D V Y +I G CE A +F M S + VT
Sbjct: 289 LIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCL 345
Query: 355 --------------------------FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
F L++ YCR+GD A + M G +P
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFG------LFPTEKSYMFLIKGLCEEGKMEEA 442
+LIG +C ++ +LD+L+ +G + + + L + LC GK E+A
Sbjct: 406 VYNILIGGICGNEKL-PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKA 464
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ EM+ KGF P YS I V+ A +L +EM N V
Sbjct: 465 YSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV 511
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 152/317 (47%), Gaps = 25/317 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++T + ++ +GLS V T N++I +S+ + +D A +
Sbjct: 218 QLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARA-------------MDKAAVVLV-- 262
Query: 236 DVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
R+V+ PN T N+L+ G+ G V+ M R G EPD ++Y+ LM C
Sbjct: 263 ---RMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLC 319
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ R EA K+++ M + + + Y T++ G+ G + + M +G++
Sbjct: 320 KNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHY 379
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
F L+ Y + G VD A+L+++ M R+G P+ T +++ LC +V +A+ R
Sbjct: 380 IFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQF-GR 438
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
++ GL P + LI GLC K ++A ++ EM+G+G P+ ++ ++ KEG
Sbjct: 439 LISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGM 498
Query: 474 VEMATMLRKEMFENQVR 490
V A K +F+ VR
Sbjct: 499 VARA----KNIFDLMVR 511
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 7/251 (2%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM-----ARLGCEPDCYSY-SVLMAVFC 293
V+ PNV ++ L+ G E ++ + M R G PD SY +V+ +
Sbjct: 155 VLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLR 214
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
E R++ A L+++M D+ + DVV YN+II + M +A M +G + +
Sbjct: 215 EGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRI 274
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T L++GYC +G + AI V+ MCR G EP+ T L+G LC R EA I +
Sbjct: 275 THNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDS- 333
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+VK G P +Y L+ G EG + + + MV G +P I++ I Y K G
Sbjct: 334 MVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGK 393
Query: 474 VEMATMLRKEM 484
V+ A +L +M
Sbjct: 394 VDDAMLLFSKM 404
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 201/468 (42%), Gaps = 56/468 (11%)
Query: 34 PSDQSHNLIATVVSLLTHHRSKSRWNHLLS----LCRSGLTPTQFSQIALG---LKNNPH 86
P+ +HN SLL + S + N + +CR G+ P F+ L KN
Sbjct: 271 PNRITHN------SLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRS 324
Query: 87 LALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEV 146
+ R + K K + ++Y T++H + + ++ + +R+ P +F +
Sbjct: 325 MEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQ-PDHYIFNI 383
Query: 147 LVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
L+ TY + G K++ + + + +GL+ T ++ +
Sbjct: 384 LIGTYTKHG--------------------KVDDAMLLFSKMRRQGLNPDTVTYGIVMDAL 423
Query: 207 SRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
+ G DA A G+ + + P+ F L+ G ++K
Sbjct: 424 C--------------MVGKVDDAMAQFGRLISE--GLTPDAVVFRNLIHGLCARDKWDKA 467
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
E++ VEM G P+ ++ L+ C+E + A+ +++ M +V+ DV+ YNT+I G
Sbjct: 468 EELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDG 527
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
+C G++ A + M L GV+ + VT+ ++NGYC+ G ++ A ++ M KG P
Sbjct: 528 YCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPG 587
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T ++ L RR A + L ++K G+ +Y ++ GLC+ ++AL++
Sbjct: 588 IVTYSTILQGLFQARRTAAAKE-LYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIF 646
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVE-----MATMLRKEMFENQV 489
+ F ++ ID +K G + A++L + + N V
Sbjct: 647 QNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVV 694
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 1/252 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ + FN L+ + + G + ++ +M R G PD +Y ++M C ++ +A
Sbjct: 374 IQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAM 433
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + + + D V + +I G C + +AEE EM G+ +++ F L+N
Sbjct: 434 AQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHL 493
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G V A +++ M R + + T LI C +V EA +L+ V+ G+ P
Sbjct: 494 CKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLD-GVKPN 552
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E +Y +I G C+ G++E+A + +M KG P + YS + G + A L
Sbjct: 553 EVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYL 612
Query: 483 EMFENQVRQEDG 494
M ++ ++ + G
Sbjct: 613 WMIKSGIKFDIG 624
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 8/251 (3%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVE-MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
TF+ L+ + + D+ + M LGC P+ +SY++L+ C+E R ++A L
Sbjct: 128 TFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHT 187
Query: 308 MRDKNVEH-----DVVAYNTIIGGFCEIG-EMARAEEFFREMGLSGVESSSVTFEHLVNG 361
M + DVV+YNT+I G G ++ A F +M G+ VT+ +++
Sbjct: 188 MMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISA 247
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+A +D A +V M + G P T L+ C + +A+ + K R+ + G+ P
Sbjct: 248 LSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFK-RMCRDGVEP 306
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y L+ LC+ G+ EA K+ MV +G +P+ Y + GY EG++ L
Sbjct: 307 DVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLL 366
Query: 482 KEMFENQVRQE 492
M N ++ +
Sbjct: 367 DMMVRNGIQPD 377
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 334 ARAEEFFREMGLSG---VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
A A FR M + V + +T+ +++ R G +D A + R G+ E T
Sbjct: 70 AVAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITF 129
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
L+ LCDK+R EA+DI R+ G P SY L+KGLC+E + ++AL + M+
Sbjct: 130 SPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMM 189
Query: 451 -----GKGFEPSLEIYSAFIDGYMKEG-NVEMATMLRKEMFE 486
G+ P + Y+ I+G ++EG ++ A L +M +
Sbjct: 190 VADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLD 231
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 173/363 (47%), Gaps = 37/363 (10%)
Query: 136 ENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSR--- 190
EN K FE+L + G +P F++ +LI+ C +I D +++ SR
Sbjct: 119 ENGNVSKGFELLAQM-ETMGVSPNVFIYTILIEACCRNGDI-------DQAKVMFSRMDD 170
Query: 191 -GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
GL+ +I + G+E+Y+++ ++V V PN++T
Sbjct: 171 LGLAANQYIYTIMINGFFKKGYKKDGFELYQKM----------------KLVGVLPNLYT 214
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N+L+ + R+G V+ E+++ G + +Y++L+ C + ++ +AE L E M+
Sbjct: 215 YNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMK 274
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
++ +N ++ G C G++ +A + ++ L G+ + VT+ L++G+ + G+
Sbjct: 275 RAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSS 334
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLFPTEKSY 426
+ +M +G P T +L+ D + +E ++K + GL P + +Y
Sbjct: 335 VVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMK----RIGLVPDQHTY 390
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI GLC +G M EA K+ MV +P+ IY+ I+GY KE N A +EM +
Sbjct: 391 GVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVK 450
Query: 487 NQV 489
N V
Sbjct: 451 NGV 453
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 126/243 (51%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R + +V++F + F G K ++ +M +G P+ + Y++L+ C + +A
Sbjct: 102 RTQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQA 161
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ ++ M D + + Y +I GF + G E +++M L GV + T+ L+
Sbjct: 162 KVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITE 221
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YCR G + A V++++ ++G T +LIG LC K +V +A +L+ R+ + + P
Sbjct: 222 YCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLE-RMKRAHINP 280
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
T +++ L+ GLC G++++AL ++ G P+L Y+ I G+ K GN + + L
Sbjct: 281 TTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELV 340
Query: 482 KEM 484
+EM
Sbjct: 341 REM 343
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+ LM F R EK +++ M R+G PD ++Y VL+ C + M EA
Sbjct: 348 ISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEAS 407
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL++ M + +++ + V YNT+I G+C+ +A +F EM +GV + ++ +
Sbjct: 408 KLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQIL 467
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGS 388
C+ G A + +M G +P S
Sbjct: 468 CKDGKSIEAKRLLKEMTEAGLKPPES 493
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 39/195 (20%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
P L + +L+ + + G++ V +L VR + RG+S T
Sbjct: 315 PTLVTYNILISGFSKVGNSSVVSEL--------------------VREMEDRGISPSKVT 354
Query: 199 CNALIWEVSRGKGVISGYEIYREV--FGLDSDA-TAGI--------------GKDVKRVV 241
L+ R + YE++ + GL D T G+ K K +V
Sbjct: 355 YTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMV 414
Query: 242 --RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
++PN +N ++ G+ +E K EM + G P+ SY + + C++ +
Sbjct: 415 EMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSI 474
Query: 300 EAEKLWEEMRDKNVE 314
EA++L +EM + ++
Sbjct: 475 EAKRLLKEMTEAGLK 489
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + T+NAL+ G + G E+ D+ ++ GC PD +Y+ L+ +E+R EA KL
Sbjct: 292 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 351
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++EM + + D V Y +I G + G++ +A ++ M G VT +++G +
Sbjct: 352 FKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 411
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG + +A+ ++ M +G P LI LC R++ AL++L A++ K P
Sbjct: 412 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML-AQMKKAFCTPDTI 470
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI GLC+ G +E A EM+ G +P + Y+ I G K GN + A + +M
Sbjct: 471 TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM 530
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 114/241 (47%), Gaps = 1/241 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++HT+ A++ + ++ + ++ GC P +Y+ L+ C+ R+ EA L
Sbjct: 258 DIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 317
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++ D DVV Y ++I G + A + F+EM G+ +V + L+ G +
Sbjct: 318 RKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQT 377
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + A VY M G P+ T+ +I L R+ A+ I K+ + GL P E
Sbjct: 378 GKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR-GLAPNEVV 436
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI GLC+ KM+ AL++ A+M P Y+ IDG K G+VE A EM
Sbjct: 437 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML 496
Query: 486 E 486
E
Sbjct: 497 E 497
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 112/502 (22%), Positives = 212/502 (42%), Gaps = 78/502 (15%)
Query: 34 PSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS-GLTPTQFSQIALGLKNNPHLALRFF 92
PS ++HNL+ + L + + +H ++ RS ++ FS + GL + ++
Sbjct: 188 PSLKTHNLV--LHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVK-AGMMIQAH 244
Query: 93 SFTQHKSL--CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKT 150
S Q + C + +Y I++ L++ + I A + L E + T
Sbjct: 245 SLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEA----------------VALMEKI--T 286
Query: 151 YRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
C ++ L+ + + ++E +D++R ++ G + V T +LI + + K
Sbjct: 287 ANGCTPTIATYNALLN---GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEK 343
Query: 211 GVISGYEIYREV----FGLDSDATAGIGKDVKRVVRVR---------------PNVHTFN 251
Y++++E+ LD+ + + + + ++ P+V T +
Sbjct: 344 RSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLS 403
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
++ G + G ++ M G P+ YS L+ C+ R+M A ++ +M+
Sbjct: 404 TMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 463
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
D + YN +I G C+ G++ A FF EM +G + T+ L++G C+AG+ D+A
Sbjct: 464 FCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAA 523
Query: 372 ILVYNDM--------------CRKG-----------FEPEG----STIEVLIGELCDKRR 402
V +DM C+ G E G T LI LC R
Sbjct: 524 CGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANR 583
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
V EA+ + A + K G+ P +Y +I L + GK+ E V EM + ++P Y+
Sbjct: 584 VDEAVSLFNA-IRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEMT-RWWKPDRVTYN 640
Query: 463 AFIDGYMKEGNVEMATMLRKEM 484
A ++G + ++ A EM
Sbjct: 641 ALLNGMIGANRMDRAHYYYLEM 662
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 114/242 (47%), Gaps = 3/242 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAVFCEERRMREAE 302
RP+V T+N L+ G+ E+ V EM G P ++++++ C+ ++ A
Sbjct: 151 RPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAM 210
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+E +R +++ ++ +I G + G M +A +E +G T+ +VN
Sbjct: 211 DHFEAVR-RSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWL 269
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ + A+ + + G P +T L+ LC R+ EA+D+L+ ++V G P
Sbjct: 270 AKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR-KIVDNGCTPD 328
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI GL +E + EA K+ EM +G Y+A I G ++ G + A+ + K
Sbjct: 329 VVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYK 388
Query: 483 EM 484
M
Sbjct: 389 TM 390
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 119/281 (42%), Gaps = 12/281 (4%)
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
W V +I+GY + RE + + ++++ V P++ T N ++ G + G
Sbjct: 157 WNV-----LITGYCLARE-----PEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKV 206
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
D + E R ++S+L+ + M +A L +E D+ Y I
Sbjct: 207 LAAMDHF-EAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAI 265
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
+ + ++ A ++ +G + T+ L+NG C+ G ++ AI + + G
Sbjct: 266 VNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 325
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
P+ T LI L ++R FEA + K + GL Y LI+GL + GK+ +A
Sbjct: 326 TPDVVTYTSLIDGLGKEKRSFEAYKLFK-EMASRGLALDTVCYTALIRGLLQTGKIPQAS 384
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
V M G P + S IDG K G + A + K M
Sbjct: 385 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM 425
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 3/214 (1%)
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
R G + ++ + L+ VF +R REA L + DV +N +I G+C E
Sbjct: 112 RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPE 171
Query: 335 RAEEFFREMGLS-GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
A REM GV S T +++G C++G V +A + + + R+ +T +L
Sbjct: 172 EAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAA-MDHFEAVRRSMPVSAATFSIL 230
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
I L + +A + + G +Y ++ L + K++EA+ + ++ G
Sbjct: 231 INGLVKAGMMIQAHSLAQETTTN-GCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANG 289
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
P++ Y+A ++G K G +E A L +++ +N
Sbjct: 290 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 323
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 125/244 (51%), Gaps = 1/244 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ V P+V T+N ++ G ++ +V + C PD +Y++L+ C+E + +
Sbjct: 153 MNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQ 212
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A KL +EMR+K + DVV YN +I G C+ G + A +F M G + + +T ++
Sbjct: 213 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILR 272
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
C G A + +DM RKG P T +LI LC + + A+DIL+ ++ G
Sbjct: 273 SMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILE-KMPMHGCT 331
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P SY L+ G C+E KM+ A++ MV +G P + Y+ + K+G V++A +
Sbjct: 332 PNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 391
Query: 481 RKEM 484
++
Sbjct: 392 LNQL 395
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N L+ GF +E ++ + M GC PD +Y+ L+ C++ ++ A ++
Sbjct: 332 PNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 391
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ K ++ YNT+I G ++G+ RA + EM G++ +T+ LV+G R
Sbjct: 392 LNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 451
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G VD AI ++D+ G P T ++ LC R+ A+D L A ++ PTE
Sbjct: 452 EGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL-AYMISKRCKPTEA 510
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+Y LI+G+ EG +EAL + E+ +G
Sbjct: 511 TYTILIEGIAYEGLAKEALDLLNELCSRGL 540
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 122/240 (50%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN L+ R+G + D+ +M GC P+ SY+ L+ FC+E++M A +
Sbjct: 297 PSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 356
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + D+V YNT++ C+ G++ A E ++ G +T+ +++G +
Sbjct: 357 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 416
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + AI + ++M RKG +P+ T L+ L + +V EA+ + G+ P
Sbjct: 417 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD-LEGLGIRPNAI 475
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y ++ GLC+ + + A+ A M+ K +P+ Y+ I+G EG + A L E+
Sbjct: 476 TYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 535
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 1/234 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNV T N ++ G + E + +M R GC P ++++L+ C + + A
Sbjct: 261 QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAID 320
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ E+M + ++YN ++ GFC+ +M RA E+ M G VT+ L+ C
Sbjct: 321 ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALC 380
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G VD A+ + N + KG P T +I L + A+ +L + + GL P
Sbjct: 381 KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD-EMRRKGLKPDI 439
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y L+ GL EGK++EA+K ++ G G P+ Y++ + G K + A
Sbjct: 440 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRA 493
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 117/228 (51%), Gaps = 4/228 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ +L+ GF R G +K V + + G PD +Y+VL++ +C+ + A ++
Sbjct: 90 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 149
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M NV DVV YNTI+ C+ G++ +A E +T+ L+ C+
Sbjct: 150 LDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCK 206
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
V A+ + ++M KG +P+ T VLI +C + R+ EA+ L + +G P
Sbjct: 207 ESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN-NMPSYGCQPNVI 265
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
++ +++ +C G+ +A K+ ++M+ KG PS+ ++ I+ ++G
Sbjct: 266 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQG 313
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 98/187 (52%), Gaps = 4/187 (2%)
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ + K E M + D++ ++I GFC IG+ +A + SG +T+
Sbjct: 73 LEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNV 132
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++GYC++G++D+A+ V + R P+ T ++ LCD ++ +A+++L R ++
Sbjct: 133 LISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD-RQLQK 188
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+P +Y LI+ C+E + +A+K+ EM KG +P + Y+ I+G KEG ++ A
Sbjct: 189 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEA 248
Query: 478 TMLRKEM 484
M
Sbjct: 249 IKFLNNM 255
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 4/229 (1%)
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
R G E M G PD + L+ FC + ++A + E + D
Sbjct: 67 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
V+ YN +I G+C+ GE+ A + M V VT+ ++ C +G + A+ V +
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
+K P+ T +LI C + V +A+ +L K G P +Y LI G+C+E
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNK-GSKPDVVTYNVLINGICKE 242
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
G+++EA+K M G +P++ ++ + G A L +M
Sbjct: 243 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML 291
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 127/295 (43%), Gaps = 39/295 (13%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C S+ ++ +I+ L R L+G A D++ E P C
Sbjct: 295 CSPSVVTFNILINFLCRQGLLGRAIDIL-------EKMP-----------MHGCTPNSLS 336
Query: 161 FD-LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
++ LL C E +K++ ++ + +++SRG + T N L+ + + V EI
Sbjct: 337 YNPLLHGFCKE----KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 392
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
+ L S + P + T+N ++ G + G E+ + EM R G +
Sbjct: 393 NQ---LSSKGCS-------------PVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 436
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +YS L++ E ++ EA K + ++ + + + YN+I+ G C+ + RA +F
Sbjct: 437 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 496
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
M + + T+ L+ G G A+ + N++C +G + S +V +
Sbjct: 497 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAV 551
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 162/348 (46%), Gaps = 50/348 (14%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+ + ++R + + ++ V + +I + + K V Y +Y E+
Sbjct: 173 QTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMI------------ 220
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
V R+ P V TF++L+ GF G F+ ++ EM PD Y++++L+ C+E
Sbjct: 221 ----VKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKE 276
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+++EA+ + M + VE VV YNT++ G+C + E+ +A+ + V +S ++
Sbjct: 277 GKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSY 336
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI------ 409
++NG+C+ VD A+ ++++MC +G P T LI LC R+ A ++
Sbjct: 337 NIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHN 396
Query: 410 ----------------------------LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
L ++ + G+ P +Y LI GLC+ G+++
Sbjct: 397 NCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKN 456
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
A V +++ KG+ + Y+ I+G KEG + A +L +M +N +
Sbjct: 457 AQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGI 504
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 127/266 (47%), Gaps = 7/266 (2%)
Query: 225 LDSDATAGIGKDVKRVVRV------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+D+ G K+ K V+ V P V T+N LM G+ K + V ++R+
Sbjct: 270 VDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRV 329
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P+ SY++++ FC+ + + EA L+ EM + + V YN++I G C+ G + A E
Sbjct: 330 APNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWE 389
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
EM + + + VT+ L++ +C+ VD AI + + G +P T +LI LC
Sbjct: 390 LVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLC 449
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
++ A D+ + ++K G +Y +I GLC+EG +EA + ++M G P
Sbjct: 450 KGGQLKNAQDVFQDLLIK-GYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDA 508
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEM 484
Y I + E A L +EM
Sbjct: 509 VTYETIIQALFHKDENEKAQKLLREM 534
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 34/246 (13%)
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
LG + +Y +L+ C+ + R A ++ ++ K V +VV Y+TII G C+ +
Sbjct: 152 LGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTD 211
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A + EM + + + VTF L+ G+C G A ++N+M K P+ T +L+
Sbjct: 212 AYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVD 271
Query: 396 ELCDKRRVFEALDIL-----------------------------KAR-----VVKFGLFP 421
LC + ++ EA +++ KA+ + + + P
Sbjct: 272 ALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAP 331
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+SY +I G C+ ++EAL + EM +G P Y++ IDG K G + A L
Sbjct: 332 NSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELV 391
Query: 482 KEMFEN 487
EM N
Sbjct: 392 DEMHNN 397
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 118/252 (46%), Gaps = 23/252 (9%)
Query: 239 RVVRVRPNVHTFNALMVGFYR-EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
R +R P++ FN ++ + + + V + +M G +PD ++ S+L+ +C +
Sbjct: 58 RQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQ 117
Query: 298 MREAEKLWEEM-----------RDKNVEHD----------VVAYNTIIGGFCEIGEMARA 336
M A ++ ++ + + HD V Y +I G C++G+ A
Sbjct: 118 MTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAA 177
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ R++ V ++ V + +++G C+ V A +Y++M K P T LI
Sbjct: 178 LQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYG 237
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
C + +A + V+K + P ++ L+ LC+EGK++EA V A M+ +G EP
Sbjct: 238 FCIVGKFKDAFRLFNEMVMK-NINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEP 296
Query: 457 SLEIYSAFIDGY 468
++ Y+ +DGY
Sbjct: 297 TVVTYNTLMDGY 308
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 93/174 (53%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+N+L+ G + G ++ EM D +Y+ L+ VFC+ + + +A
Sbjct: 364 IAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAI 423
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +++++ ++ ++ YN +I G C+ G++ A++ F+++ + G ++ T+ ++NG
Sbjct: 424 ALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGL 483
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
C+ G D A ++ + M G P+ T E +I L K +A +L+ V+K
Sbjct: 484 CKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIK 537
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN+ T+N L+ G + G + +DV+ ++ G + ++Y++++ C+E EAE
Sbjct: 434 IQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAE 493
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
L +M D + D V Y TII E +A++ REM + GV
Sbjct: 494 VLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGV 539
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
+M GV+ T L+N YC G + A V+ + + G LC
Sbjct: 92 QMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMG--------------LCLNG 137
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+V EAL + V+ G +Y LI GLC+ G+ AL+V ++ GK ++ +Y
Sbjct: 138 KVNEAL-LFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMY 196
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQV 489
S IDG K+ V A L EM ++
Sbjct: 197 STIIDGLCKDKLVTDAYGLYSEMIVKRI 224
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 70/140 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ ++ T+N+L+ F + +K + ++ G +P+ +Y++L+ C+ +++ A+
Sbjct: 399 IPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQ 458
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++++ K + YN +I G C+ G AE +M +G+ +VT+E ++
Sbjct: 459 DVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQAL 518
Query: 363 CRAGDVDSAILVYNDMCRKG 382
+ + A + +M KG
Sbjct: 519 FHKDENEKAQKLLREMVIKG 538
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 178/390 (45%), Gaps = 55/390 (14%)
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL 143
NP AL FF +T ++ H+ S TI++IL R+R DV+ K+K
Sbjct: 84 NPLQALEFFYYTDNRKGFYHTPYSLDTILYILGRSRKFDHIWDVL----------IKMKR 133
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC-NAL 202
+ + + R + V + K C + +E + +SV +TC NAL
Sbjct: 134 KDRFLISPR---TMQIVLARVAKLCSVRQTVESFRK--------FKKFVSVLDTTCFNAL 182
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
+ + + K + +Y + K+ K PN+ TFN L+ G+ +
Sbjct: 183 LRTLCQEKSMTDARNVYHR-----------LKKEFK------PNLQTFNILLSGWKQS-- 223
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
E+ E + EM LG +PD SY+ L+ V+C++R M +A K+ E+MR++++ DV+ Y +
Sbjct: 224 -EEAELFFEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDISPDVITYTS 282
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
IIGG +G+ +A + EM G + ++ YC A + A + ++M KG
Sbjct: 283 IIGGLGLVGQPDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASNLMDEMASKG 342
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKA------RVVKFGLFPTEKSYMFLIKGLCEE 436
P +T + RVF + L+ R+++ G P +S MFLI+ +
Sbjct: 343 LSPNATTYNLFF-------RVFYWSNDLRNSWSLYRRMMESGCLPNTQSCMFLIRLFRKH 395
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
K+E AL + +MV KGF + + D
Sbjct: 396 EKVEMALTLWNDMVEKGFGSYILVSDVLFD 425
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N FY ++ M GC P+ S L+ +F + ++ A L
Sbjct: 345 PNATTYNLFFRVFYWSNDLRNSWSLYRRMMESGCLPNTQSCMFLIRLFRKHEKVEMALTL 404
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
W +M +K ++ + + C++G++ AE+ F +M G + S+V+F +
Sbjct: 405 WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKCFLQMIEKGHKPSNVSFRRI 458
>gi|218200036|gb|EEC82463.1| hypothetical protein OsI_26904 [Oryza sativa Indica Group]
Length = 346
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 122/246 (49%), Gaps = 4/246 (1%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMA---RLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++N ++ R G ++ + M+ C P+ SY+VLM C +RR +A L
Sbjct: 79 SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRRADQAVGLL 138
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
MR V DVV Y T+I G C+ E+ +A E EM SG+E + V + L+ GYC++
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + V+ +M KG EP+ LI LC + +A ++ +V+ GL P +
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDM-MVRRGLEPNVVT 257
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI +C+EG ++EA+ V +M KG P + Y+ I G ++ A L +EM
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317
Query: 486 ENQVRQ 491
+ Q
Sbjct: 318 RGYIIQ 323
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 108/211 (51%), Gaps = 2/211 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPN ++ LM + ++ + M G D +Y L+ C+ + +A +
Sbjct: 112 RPNAVSYTVLMRALCADRRADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L EM + +E +VV Y++++ G+C+ G + F EM G+E V + L++ C
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G A V + M R+G EP T VLI +C + V EA+ +LK ++ + G+ P
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLK-KMSEKGVAPDV 290
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+Y LIKGL + +M+EA+ + EMV +G+
Sbjct: 291 VTYNTLIKGLSDVLEMDEAMWLLEEMV-RGY 320
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 93/187 (49%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
R VR +V T+ L+ G +K ++ EM G EP+ YS L+ +C+ R
Sbjct: 142 RSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRW 201
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+ K++ EM +K +E DVV Y +I C++G+ +A M G+E + VT+ L
Sbjct: 202 EDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVL 261
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+N C+ G V AI V M KG P+ T LI L D + EA+ +L+ V +
Sbjct: 262 INCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGYI 321
Query: 419 LFPTEKS 425
+ +++S
Sbjct: 322 IQSSQQS 328
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 39/212 (18%)
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGL------------------------------ 345
D V+YNT++ C G RA R M L
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRRADQAV 135
Query: 346 --------SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+GV + VT+ L+ G C A +VD A+ + +MC G EP L+
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C R +E + + + + G+ P Y LI LC+ GK ++A V MV +G EP+
Sbjct: 196 CKSGR-WEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ Y+ I+ KEG+V+ A + K+M E V
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGV 286
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+ + V ++R + S G+ V T LI +G+ E+ + V + +GI
Sbjct: 130 RADQAVGLLRSMRSAGVRADVVTYGTLI------RGLCDAAEVDKAVELMGEMCESGI-- 181
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
PNV +++L+ G+ + G +E V V+VEM+ G EPD Y+ L+ C+
Sbjct: 182 --------EPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKV 233
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ ++A + + M + +E +VV YN +I C+ G + A ++M GV VT+
Sbjct: 234 GKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTY 293
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCR 380
L+ G ++D A+ + +M R
Sbjct: 294 NTLIKGLSDVLEMDEAMWLLEEMVR 318
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 159/345 (46%), Gaps = 23/345 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST----CNALIWEVSRGKG--- 211
F F++LI C +++++ ++ ++ G T N L +E +
Sbjct: 120 FHFNILINC---FSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEF 176
Query: 212 ----VISGYEIYREVFGLDSDATAGIGKD------VKRVVRV--RPNVHTFNALMVGFYR 259
V SGY+ + IGK +K++ + RP++ +N ++ G +
Sbjct: 177 FDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCK 236
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
+ + D++ E+ G PD ++YS+LM C + EA L+ EM N+ DVV
Sbjct: 237 DRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVT 296
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+N ++ C+ G ++ A+ + M GVE + T+ L+NGYC V A +V++ M
Sbjct: 297 FNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMI 356
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG P + +LI C +R+ EA ++ + GL P +Y LI GLC+ G+
Sbjct: 357 TKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFR-GLIPNTFNYNTLISGLCQAGRH 415
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
EA ++ +M +G P L + +D K G ++ A L + M
Sbjct: 416 CEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAM 460
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 125/245 (51%), Gaps = 1/245 (0%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
++R+ +V FN L+ F R + V ++ +LG EPD ++S L+ C E +
Sbjct: 112 LLRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFA 171
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
A + ++EM + ++ YNTII GFC+IG+ A ++M +G V + ++
Sbjct: 172 RAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTII 231
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+G C+ V A+ +++++ KG P+ T +L+ LC+ + EA L ++ +
Sbjct: 232 DGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEA-SALFNEMMSLNI 290
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P ++ L+ LC+EG + EA + M+ KG EP+ Y++ ++GY + V A M
Sbjct: 291 MPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARM 350
Query: 480 LRKEM 484
+ M
Sbjct: 351 VFDAM 355
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 115/245 (46%), Gaps = 1/245 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + F+ L+ R + V + + L E D + +++L+ F +R+ A +
Sbjct: 82 PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSV 141
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ E D V ++++I G C + ARA EFF EM SG + + T+ ++ G+C+
Sbjct: 142 LGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCK 201
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G A+ + M + G P+ +I LC R V EALDI + + G+ P
Sbjct: 202 IGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIF-SEIKGKGVRPDVF 260
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L+ GLC + EEA + EM+ P + ++ +D KEG + A + K M
Sbjct: 261 TYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIM 320
Query: 485 FENQV 489
E V
Sbjct: 321 IEKGV 325
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 86/162 (53%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN T+N+LM G+ + + V+ M GC P+ SY++L+ +C+ +R+ EA
Sbjct: 325 VEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEAR 384
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L++EM + + + YNT+I G C+ G A E F++M G VT L++
Sbjct: 385 ELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSL 444
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
C+ G +D+A+ ++ M +P T ++LI + +++
Sbjct: 445 CKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIY 486
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 1/200 (0%)
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C + +A + M K+ +V ++ ++ I + + L +E
Sbjct: 60 CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
F L+N + R VD A V + + GFEP+ T LI LC + + A++
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
V G P +Y +IKG C+ GK A+ + +M G P + IY+ IDG K+
Sbjct: 180 MVAS-GYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDR 238
Query: 473 NVEMATMLRKEMFENQVRQE 492
V A + E+ VR +
Sbjct: 239 LVSEALDIFSEIKGKGVRPD 258
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 48/91 (52%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +N L+ G + G + +++ +M GC PD + ++L+ C+ + A +L
Sbjct: 397 PNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRL 456
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
+ M+D ++ ++V Y+ +I + G++ R
Sbjct: 457 FRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 123/246 (50%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V ++N ++ G+ +G + D++ M G P +++VL+ + + +A +
Sbjct: 357 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMII 416
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EMRD V+ +V+ Y T+I C IG+M A E F +M GV + L+ G+C
Sbjct: 417 FNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT 476
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A + +++ G + +I LC RV +A +I V GL PT
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDL-TVNVGLHPTAV 535
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y L+ G C GKME+AL+V MV G EP+ +Y ++GY K G ++ L +EM
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595
Query: 485 FENQVR 490
+ ++
Sbjct: 596 LQKGIK 601
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 126/247 (51%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P + TFN L+ + G +K ++ EM G +P+ +Y+ ++A C +M +A
Sbjct: 390 IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAM 449
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + +M D+ V D AY+ +I GFC G + +A+E E+ +G+ V F ++N
Sbjct: 450 EKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNL 509
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G V A +++ G P +L+ C ++ +AL + A +V G+ P
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA-MVSAGIEPN 568
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ Y L+ G C+ G+++E L + EM+ KG +PS +Y+ IDG + G A +
Sbjct: 569 DVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 628
Query: 483 EMFENQV 489
EM E+ +
Sbjct: 629 EMTESGI 635
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 120/232 (51%), Gaps = 1/232 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN T+N L+ G+ G +++ V+ EM R PD ++++LM C+ +++EA
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEAR 344
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ M K DV +YN ++ G+ G + + F M G+ TF L+ Y
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 404
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G +D A++++N+M G +P T +I LC ++ +A++ +++ G+ P
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFN-QMIDQGVAPD 463
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ +Y LI+G C G + +A ++ +E++ G + ++S+ I+ K G V
Sbjct: 464 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRV 515
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 126/248 (50%), Gaps = 3/248 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG--CEPDCYSYSVLMAVFCEERRMREAE 302
P+V +++ L+ +G + +D+ MA G C PD +Y+ ++ F +E + +A
Sbjct: 180 PDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKAC 239
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++EM + + D V Y++++ C+ M +AE F R+M GV ++ T+ +L+ GY
Sbjct: 240 DLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGY 299
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G A+ V+ +M R+ P+ T +L+G LC ++ EA D+ +K G P
Sbjct: 300 SSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMK-GQNPD 358
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY ++ G +G + + + M+G G P + ++ I Y G ++ A ++
Sbjct: 359 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFN 418
Query: 483 EMFENQVR 490
EM ++ V+
Sbjct: 419 EMRDHGVK 426
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 126/277 (45%), Gaps = 34/277 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V +N ++ GF++EG K D++ EM + G PD +YS ++ C+ R M +AE
Sbjct: 217 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAF 276
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M +K V + YN +I G+ G+ A F+EM + VTF L+ C+
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCK 336
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFEAL----------- 407
G + A V++ M KG P+ + +++ G L D +F+ +
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICT 396
Query: 408 -DIL-----------KARVV-----KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
++L KA ++ G+ P +Y +I LC GKM++A++ +M+
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMI 456
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+G P Y I G+ G++ A L E+ N
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN 493
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 117/248 (47%), Gaps = 1/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+PNV T+ ++ R G + + + +M G PD Y+Y L+ FC + +A+
Sbjct: 425 VKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAK 484
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L E+ + + D+V +++II C++G + A+ F G+ ++V + L++GY
Sbjct: 485 ELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGY 544
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G ++ A+ V++ M G EP L+ C R+ E L + + + K G+ P+
Sbjct: 545 CLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQK-GIKPS 603
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y +I GL E G+ A EM G + YS + G K + A L K
Sbjct: 604 TILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFK 663
Query: 483 EMFENQVR 490
E+ V+
Sbjct: 664 ELRAMNVK 671
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 133/293 (45%), Gaps = 17/293 (5%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
+++ +M+ G+ + + +++I + + V+ I+ D T +G
Sbjct: 485 ELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIF--------DLTVNVG------- 529
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ P ++ LM G+ G EK V+ M G EP+ Y L+ +C+ R+ E
Sbjct: 530 -LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L+ EM K ++ + YN II G E G A+ F EM SG+ + T+ ++ G
Sbjct: 589 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRG 648
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ D AI ++ ++ + + T+ +I + RRV EA D+ A + + GL P
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF-ASISRSGLVP 707
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+Y +I L +EG +EEA + + M G EP + + + +K+ +
Sbjct: 708 CVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 760
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
R G + +S T+ L++ RA + A+ + + R G + L+ C+
Sbjct: 100 RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEA 159
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA---LKVQAEMVGKGFEPS 457
+R EALDIL R + G P SY L+K LC++GK +A L++ AE G P
Sbjct: 160 KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG-GAVCSPD 218
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ Y+ IDG+ KEG+V A L KEM + +
Sbjct: 219 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI 250
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 98/236 (41%), Gaps = 39/236 (16%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI--------- 330
P ++Y++LM R A + ++ + D++ N ++ GFCE
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168
Query: 331 ---------------------------GEMARAEEFFREMGLSGVESSS--VTFEHLVNG 361
G+ +A++ R M G S V + +++G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ + GDV+ A ++ +M ++G P+ T ++ LC R + +A L+ V K G+ P
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK-GVLP 287
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI G G+ +EA++V EM + P + ++ + K G ++ A
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEA 343
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
R + V+ ++ T N ++ G ++ E+ +D++ ++R G P +YS+++ +E +
Sbjct: 666 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLV 725
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EAE ++ M++ E D N ++ + E+ RA + LS ++ + + EHL
Sbjct: 726 EEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAY-----LSKIDERNFSLEHL 780
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 75/168 (44%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T++ ++ G ++ F++ ++ E+ + + D + + ++A + RR+ EA+ L+
Sbjct: 638 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 697
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ + VV Y+ +I + G + AE+ F M +G E S H+V +
Sbjct: 698 ASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKK 757
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
++ A + + + F E T +L+ K E + L A+
Sbjct: 758 NEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFLPAK 805
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 196/409 (47%), Gaps = 39/409 (9%)
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLK- 142
+P AL+ F+ + H+ ++YATI+ L++ + + V RV + K
Sbjct: 145 DPQHALKIFNMVSEQKGFNHNNATYATILQKLAQFKKF---QAVDRVLHQMTYEACKFHE 201
Query: 143 -LFEVLVKTYRECGSAPFVFD--LLIKCCLEVKNIEK-IETC---------VDIVRMLM- 188
+F L+K Y +CG VFD L I+ + K K I +C VD+VR L+
Sbjct: 202 GVFINLMKHYSKCGFHEKVFDAFLSIQTIVREKPSPKAISSCLNLLVDSNQVDLVRKLLL 261
Query: 189 --SRGLSVKVSTC--NALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVR 244
R L K + C N L+ R + S +E+ +E+ +
Sbjct: 262 YAKRSLVYKPNVCIFNILVKYHCRRGDIDSAFEVVKEM---------------RNSKYSY 306
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEM-ARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
PNV T++ LM G R G ++ +++ EM ++ PD +Y+VL+ FC E + A
Sbjct: 307 PNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARN 366
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ E M++ +V Y+ ++ G C+ G++ A+ EM SG++ ++T+ L+N +
Sbjct: 367 VIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFS 426
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G +D AI + +M + + T V++G LC + R EALD+++ ++ + G++ +
Sbjct: 427 RNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDEALDMIE-KLPQQGVYLNK 485
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
SY ++ L + ++ +A K+ M+ +GF P + + KEG
Sbjct: 486 GSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEG 534
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 39/259 (15%)
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAVFCEE 295
++ +VR +P+ ++ + + V + + R L +P+ +++L+ C
Sbjct: 227 IQTIVREKPSPKAISSCLNLLVDSNQVDLVRKLLLYAKRSLVYKPNVCIFNILVKYHCRR 286
Query: 296 RRMREAEKLWEEMRDKNVEH-DVVAYNTIIGGFCEIGEMARAEEFFREM-GLSGVESSSV 353
+ A ++ +EMR+ + +V+ Y+T++ G C G + A E F EM + +
Sbjct: 287 GDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPL 346
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ L+NG+CR G D A R V E +
Sbjct: 347 TYNVLINGFCREGKADRA-----------------------------RNVIEFMK----- 372
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
G P +Y L+ GLC+ GK+++A V AEM G +P Y++ I+ + + G
Sbjct: 373 --NNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQ 430
Query: 474 VEMATMLRKEMFENQVRQE 492
++ A L EM EN + +
Sbjct: 431 IDEAIELLTEMKENDCQAD 449
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 90/195 (46%), Gaps = 9/195 (4%)
Query: 225 LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+D AG +D K V+ ++P+ T+ +L+ F R G ++ ++ EM C
Sbjct: 387 VDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDC 446
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+ D +++V++ C E R EA + E++ + V + +Y ++ + E+ +A +
Sbjct: 447 QADTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANK 506
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
M G T L+ C+ G + A D+ GF+P+ + E+LI +C
Sbjct: 507 LLGLMLSRGFVPHYATSNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSWELLIDLIC 566
Query: 399 DKRR---VFEALDIL 410
R+ VFE LD L
Sbjct: 567 RDRKLLYVFELLDEL 581
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 130/279 (46%), Gaps = 41/279 (14%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P V +N L+ E F+ +E ++ M R G EP+ Y+Y++L+ C+ R+ A K
Sbjct: 146 QPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACK 205
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L EM +K E DVV+Y T+I ++G++ A RE+ + + SV + L+NG+C
Sbjct: 206 LLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA----RELSIRFQPNVSV-YNALINGFC 260
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD------------------------ 399
R V L+ M KG +P T +I L
Sbjct: 261 REYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVY 320
Query: 400 -----------KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
+ RV EAL+I R+ + G P +Y LI GLC GKM EA+ V ++
Sbjct: 321 TFTSLMKGYFMRGRVLEALNIWN-RMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSK 379
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
M G P++ Y A IDG+ K G++ A+ + +M N
Sbjct: 380 MERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTN 418
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 186/395 (47%), Gaps = 26/395 (6%)
Query: 101 CKHSLSSYATIIHIL---SRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSA 157
C+ ++ Y ++ + +R ++I P ++ + P L + L K R G+
Sbjct: 145 CQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGAC 204
Query: 158 PFVFDLLIKCCLE--VKNIEKIETCVDIVRMLMSRGLSVK----VSTCNALIWEVSRGKG 211
+ ++ K C V I + + ++ +R LS++ VS NALI G
Sbjct: 205 KLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALI------NG 258
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
Y++ +EVF L +G+ V++ + PNV T++ ++ G E VW
Sbjct: 259 FCREYKV-KEVFLL-------LGQMVEK--GIDPNVITYSTVISSLSGIGNVELALAVWA 308
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
+M GC P+ Y+++ LM + R+ EA +W M ++ E +VVAYNT+I G C G
Sbjct: 309 KMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHG 368
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+M A +M +G + T+ L++G+ +AGD+ A ++N M G P
Sbjct: 369 KMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYT 428
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
++ LC +A +++ ++ P ++ IKGLC G++E A+ + +M
Sbjct: 429 SMVNVLCRSSMFSQAWSLIE-KMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQ 487
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
G P+++ Y+ +DG +KE ++ A L EM E
Sbjct: 488 YGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEE 522
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 104/190 (54%), Gaps = 2/190 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TFN + G G E +++ +M + GC P+ +Y+ ++ +E R++EA +L
Sbjct: 457 PNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALEL 516
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM +K +E ++V YNTI GGFC +G+ A + +M + GV+ ++T+ L YC
Sbjct: 517 VTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCM 576
Query: 365 AGDVDSAILVYNDMCRKG-FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G V +AI + + + G + PE + L+ +C++ V EA+ L +++ G+
Sbjct: 577 QGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLD-KMLNEGICLNA 635
Query: 424 KSYMFLIKGL 433
++ L++GL
Sbjct: 636 ATWNALVRGL 645
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 104/258 (40%), Gaps = 35/258 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+ AL+ GF + G ++W +M GC P+ Y+ ++ V C +A L
Sbjct: 387 PNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSL 446
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGE-------------------------------- 332
E+M N + V +NT I G C G
Sbjct: 447 IEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLK 506
Query: 333 ---MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
+ A E EM G+E + VT+ + G+C G + A+ + M G +P+ T
Sbjct: 507 ENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAIT 566
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
L C + +V A+ +L P +Y L+ G+C + +EEA+ +M
Sbjct: 567 YNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKM 626
Query: 450 VGKGFEPSLEIYSAFIDG 467
+ +G + ++A + G
Sbjct: 627 LNEGICLNAATWNALVRG 644
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 6/186 (3%)
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A K++ +R+ + V YN ++ E + M G E + T+ L+
Sbjct: 132 QALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILL 191
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
C+ VD A + +M KG EP+ + +I + +V E AR +
Sbjct: 192 KALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEE------ARELSIRF 245
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P Y LI G C E K++E + +MV KG +P++ YS I GNVE+A
Sbjct: 246 QPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALA 305
Query: 480 LRKEMF 485
+ +MF
Sbjct: 306 VWAKMF 311
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
K +H + Y +I ++ + ++M L G+ S F +++N Y R G
Sbjct: 71 NSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLA 130
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A+ ++ + G +P L+ + + R F+ ++ + + + + G P +Y
Sbjct: 131 EQALKMFYRIREFGCQPTVKIYNHLLDAMLSENR-FQMIEPIYSNMKRDGKEPNVYTYNI 189
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
L+K LC+ +++ A K+ EM KG EP + Y+ I K G VE A
Sbjct: 190 LLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA 238
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 134/242 (55%), Gaps = 4/242 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+++P+V TFNAL+ F +EG F E+++ EM R+ P+ ++Y+ L+ FC E + EA
Sbjct: 242 KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA 301
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+++ M K DVVAY ++I GFC+ ++ A + F EM G+ +++T+ L+ G
Sbjct: 302 RQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQG 361
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVKFG 418
+ + G + A V++ M +G P T VL+ LC +V +AL I ++ R + G
Sbjct: 362 FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD-G 420
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ P +Y L+ GLC GK+E+AL V +M + + + Y+ I G K G V+ A
Sbjct: 421 VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAV 480
Query: 479 ML 480
L
Sbjct: 481 NL 482
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 184/410 (44%), Gaps = 34/410 (8%)
Query: 87 LALRFFSFTQHKSLCKHS--LSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF 144
+A+RFF +++ + +S S++ ++ + R R+++R L S + + L LF
Sbjct: 1 MAMRFFQLHRNRLVKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLF 60
Query: 145 EVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
+V E P + D K + ++K + +++ L G+S + TCN L+
Sbjct: 61 THMV----ESRPLPSIIDF-TKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM- 114
Query: 205 EVSRGKGVISGYEIYREVFGLDSD---ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
F S A++ +GK +K + P++ TF +L+ GF
Sbjct: 115 ----------------NCFCQSSQPYLASSFLGKMMK--LGFEPDIVTFTSLINGFCLGN 156
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
E+ + +M +G +PD Y+ ++ C+ + A L+++M + + DVV Y
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
+++ G C G A+ R M ++ +TF L++ + + G A +YN+M R
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
P T LI C + V EA + K G FP +Y LI G C+ K+++
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK-GCFPDVVAYTSLINGFCKCKKVDD 335
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
A+K+ EM KG + Y+ I G+ + G +A +E+F + V +
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA----QEVFSHMVSR 381
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 80/155 (51%), Gaps = 3/155 (1%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+ L+ GF + G ++V+ M G P+ +Y+VL+ C ++++A ++
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 306 EEMRDK---NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
E+M+ + V ++ YN ++ G C G++ +A F +M ++ +T+ ++ G
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
C+AG V +A+ ++ + KG +P T +I L
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL 505
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
+K++ + I + +GL+ T LI +G G + + +EVF
Sbjct: 331 KKVDDAMKIFYEMSQKGLTGNTITYTTLI----QGFGQVGKPNVAQEVFS---------- 376
Query: 235 KDVKRVVR-VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL---GCEPDCYSYSVLMA 290
V R V PN+ T+N L+ G +K ++ +M + G P+ ++Y+VL+
Sbjct: 377 ---HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C ++ +A ++E+MR + ++ ++ Y II G C+ G++ A F + GV+
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+ VT+ +++G R G A +++ M G
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 11/177 (6%)
Query: 326 GFCEIGEMAR----------AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
FC E+ R A + F M S S + F L+N + D I +
Sbjct: 36 AFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLC 95
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
+ + G + T +L+ C + + A L +++K G P ++ LI G C
Sbjct: 96 DHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFL-GKMMKLGFEPDIVTFTSLINGFCL 154
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+MEEA+ + +MV G +P + +Y+ ID K G+V A L +M +R +
Sbjct: 155 GNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPD 211
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++SRG+ + T N L+ + V I+ ++ + D A PN
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA-------------PN 424
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ T+N L+ G G EK V+ +M + + +Y++++ C+ +++ A L+
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ K V+ +VV Y T+I G G A FR+M GV
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 123/249 (49%), Gaps = 3/249 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V ++NA+M F++ V++ M G PD Y++++ M FC R A +L
Sbjct: 109 PSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRL 168
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M + E VAY T+IGGF E A E F EM G+ + F L++ CR
Sbjct: 169 LNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCR 228
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G V + + N + ++G P T+ + I C + + EA+ +L V GL P
Sbjct: 229 KGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDG--VGRGLTPDVI 286
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA-TMLRKE 483
+Y LI GLC+ K+ EA +MV +G+EP Y++ IDGY K G ++ A +LR
Sbjct: 287 TYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDG 346
Query: 484 MFENQVRQE 492
F+ V E
Sbjct: 347 AFKGFVPDE 355
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 125/250 (50%), Gaps = 2/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN+ T N + GF + + + + R G PD +Y+ L+ C+ ++ EAE
Sbjct: 247 VSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAE 305
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+M ++ E D YN+II G+C++G M A++ R+ G T+ L+NG
Sbjct: 306 HYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGL 365
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ GD+D AI V+N+ KG +P L+ L + + +AL ++ + + G P
Sbjct: 366 CQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMN-EMSENGCSPD 424
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I GLC+ G + +A + + + KG P + ++ IDGY K+ ++ A +
Sbjct: 425 IWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVD 484
Query: 483 EMFENQVRQE 492
M+ + V +
Sbjct: 485 RMWNHGVSPD 494
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 117/217 (53%), Gaps = 2/217 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+N+++ G + G +E V + M GC P+ +Y++L FC+ R++ EA
Sbjct: 491 VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEAL 550
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV-TFEHLVNG 361
L EEM++K + DVV + T++ GFC+ G++ A + F+ + S ++ T+ ++N
Sbjct: 551 NLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINA 610
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ +++ A ++N MC GF P+ T V+I C + L ++ K GL P
Sbjct: 611 FAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEK-GLIP 669
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ ++ ++ LC + ++ EA+ + MV KG P +
Sbjct: 670 SLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEV 706
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 149/326 (45%), Gaps = 26/326 (7%)
Query: 184 VRML--MSRGLSVKVSTCNALIWEVSRG-----------KGVISGYE----IYREVFGLD 226
+R+L + RGL+ V T N LI + + K V GYE Y + +D
Sbjct: 271 IRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSI--ID 328
Query: 227 SDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
G+ ++ +++R P+ T+ +L+ G ++G ++ +V+ E G +P
Sbjct: 329 GYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKP 388
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+ + L+ ++ + +A KL EM + D+ YN +I G C+IG ++ A+
Sbjct: 389 NLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLV 448
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
+ G TF L++GYC+ +D+AI + + M G P+ T ++ LC
Sbjct: 449 IDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKA 508
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+ + + K + K G P +Y L + C+ K+EEAL + EM KG P +
Sbjct: 509 GKYEDVMGTFKLMMEK-GCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVN 567
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFE 486
+ + G+ G+++ A L K + E
Sbjct: 568 FGTLMKGFCDNGDLDGAYQLFKRVDE 593
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 176/412 (42%), Gaps = 15/412 (3%)
Query: 82 KNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKL 141
+ NP AL F+ + + KH+L +Y +I L +V+ + +N
Sbjct: 17 QKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLE 76
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
++ ++ Y G D+ E + E V +M+ + +
Sbjct: 77 GVYIGAMRNYGRKGKIQEAVDV-----FERMDFFNCEPSVQSYNAIMNILVEYRYFDQAH 131
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP------NVHTFNALMV 255
++ R KG++ ++Y + S +R++ P + + ++
Sbjct: 132 KVYMRMRDKGIVP--DVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIG 189
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
GFY E + +++ EM LG PD +++ L+ C + ++E+E+L ++ + V
Sbjct: 190 GFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSP 249
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
++ N I GFC+ + A +G G+ +T+ L+ G C+ V A
Sbjct: 250 NLFTVNIFIQGFCQRAMLNEAIRLLDGVG-RGLTPDVITYNTLICGLCKNFKVVEAEHYL 308
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
M +G+EP+G T +I C + A IL+ K G P E +Y LI GLC+
Sbjct: 309 RKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFK-GFVPDESTYCSLINGLCQ 367
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+G ++ A+ V E + KG +P+L + + + G ++G + A L EM EN
Sbjct: 368 DGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSEN 419
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 134/299 (44%), Gaps = 16/299 (5%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
I+ +++ M +GL + CN L+ +S+ ++ ++ E+ + G
Sbjct: 371 IDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEM------SENG---- 420
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
P++ T+N ++ G + G +++ ++ G PD ++++ L+ +C++
Sbjct: 421 ------CSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKL 474
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
++ A ++ + M + V DV+ YN+I+ G C+ G+ F+ M G + +T+
Sbjct: 475 KLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYN 534
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L +C+A V+ A+ + +M KG P+ L+ CD + A + K +
Sbjct: 535 ILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQ 594
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ T +Y +I + M A K+ +M GF P Y IDG+ K GN+
Sbjct: 595 YKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNIN 653
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+NAL++GF EG E + EM + G +PD Y+Y+ L+ C ++ +A KLW+E
Sbjct: 502 TYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEF 561
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + ++ Y ++ G+C+ + E F E+ +E +S+ + ++ +C+ G+V
Sbjct: 562 KASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNV 621
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+A+ + +M KG P +T LI +C+ V +A ++ + K G P Y
Sbjct: 622 AAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLID-EMRKEGFVPNVVCYTA 680
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI G C+ G+M+ A EM+ P+ Y+ IDGY K GN+E A L +M E+
Sbjct: 681 LIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESG 740
Query: 489 V 489
+
Sbjct: 741 I 741
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 141/302 (46%), Gaps = 17/302 (5%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
IV+ ++ RGL + T NALI V + + E+ KR
Sbjct: 487 IVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM--------------TKR--G 530
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+++T+N L+ G G + +W E G + ++Y ++M +C+ R+ + E
Sbjct: 531 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVE 590
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ E+ K +E + + YN II C+ G +A A + M G+ + T+ L++G
Sbjct: 591 NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGV 650
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G V+ A + ++M ++GF P LIG C K + + ++ F + P
Sbjct: 651 CNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYC-KLGQMDTAESTWLEMISFNIHPN 709
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ +Y +I G C+ G ME+A + +M G P + Y+ +G+ K +++ A +
Sbjct: 710 KFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCD 769
Query: 483 EM 484
+M
Sbjct: 770 QM 771
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 118/236 (50%), Gaps = 1/236 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T NAL+ G G + + EM G D +Y+ L+ FC E ++ +L EEM
Sbjct: 467 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 526
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ ++ D+ YN ++ G C +G++ A + + E SG+ S+ T+ ++ GYC+A +
Sbjct: 527 TKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 586
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ ++N++ K E ++I C V AL +L+ K G+ P +Y
Sbjct: 587 EDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK-GILPNCATYSS 645
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LI G+C G +E+A + EM +GF P++ Y+A I GY K G ++ A EM
Sbjct: 646 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM 701
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 201/476 (42%), Gaps = 64/476 (13%)
Query: 69 LTPTQFSQI--ALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATI-------------IH 113
L+P+QF Q+ ++GLK NP L FF T L L S + H
Sbjct: 71 LSPSQFDQLFFSIGLKANPMTCLNFF--TLRLILSNFDLPSILIVYGNLPVLNLDSEKFH 128
Query: 114 ILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY----RECG--SAPFVFDLLIK- 166
I L G V R + F++L+ Y R G A VF LL +
Sbjct: 129 IEIANALFGLTSVVGRFEWT--------QAFDLLIHVYSTQFRNLGFSCAVDVFYLLARK 180
Query: 167 --------CCLEVKNIEK---IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISG 215
C + ++ K E C ++ R +MS G V + +I + +G + +
Sbjct: 181 GTFPSLKTCNFXLSSLVKANEFEKCCEVFR-VMSEGACPDVFSFTNVINALCKGGKMENA 239
Query: 216 YEIYR--EVFGLDSDATA------GIGKDVK-----------RVVRVRPNVHTFNALMVG 256
E++ E G+ + G+ ++ + V V+PN+ T+ AL+ G
Sbjct: 240 IELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALING 299
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
+ F+KV + EM G P+ ++ L+ +C+ + A K+ + M KN+
Sbjct: 300 LIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPT 359
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
V +++ GFC+ ++ AE E+ SG+ +V+ C+ SA
Sbjct: 360 SVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTK 419
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
M + F P + +L+ LC + EA + L R+++ G ++ + LI GLC
Sbjct: 420 MMLSRNFRPSDLLLTMLVCGLCKDGKHLEATE-LWFRLLEKGSPASKVTSNALIHGLCGA 478
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
GK+ EA ++ EM+ +G Y+A I G+ EG VE LR+EM + ++ +
Sbjct: 479 GKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPD 534
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 2/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T N + + FEK +V+ M+ C PD +S++ ++ C+ +M A +L
Sbjct: 184 PSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKMENAIEL 242
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M + +VV YN II G C+ G + A E +M + GV+ + T+ L+NG +
Sbjct: 243 FMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIK 302
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D + ++M GF P LI C + AL I + K + PT
Sbjct: 303 LNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISK-NITPTSV 361
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ L++G C+ ++E A E++ G + + + K+ A K M
Sbjct: 362 TLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMM 421
Query: 485 FENQVRQED 493
R D
Sbjct: 422 LSRNFRPSD 430
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN T+++L+ G G E + + EM + G P+ Y+ L+ +C+ +M AE
Sbjct: 636 ILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAE 695
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
W EM N+ + Y +I G+C++G M +A +M SG+ VT+ L NG+
Sbjct: 696 STWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGF 755
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+A D+D+A V + M +G + T L+
Sbjct: 756 CKANDMDNAFKVCDQMATEGLPVDEITYTTLV 787
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 21/221 (9%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
LF L+ E S V++++IK + N+ + ++ + S+G+ +T ++
Sbjct: 591 NLFNELLSKKMELNS--IVYNIIIKAHCQNGNVA---AALQLLENMKSKGILPNCATYSS 645
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
LI V GL DA I D R PNV + AL+ G+ + G
Sbjct: 646 LIHGVCN--------------IGLVEDAKHLI--DEMRKEGFVPNVVCYTALIGGYCKLG 689
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ E W+EM P+ ++Y+V++ +C+ M +A L +M++ + DVV YN
Sbjct: 690 QMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYN 749
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ GFC+ +M A + +M G+ +T+ LV+G+
Sbjct: 750 VLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790
>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 192/445 (43%), Gaps = 58/445 (13%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI 128
L ++ +I LKN P+LA FF+ + +H++ +YA +I +L R RL + ++
Sbjct: 61 LNTSRVVEIFYNLKNEPNLAWSFFTQLKESGF-QHNVDTYAALIRVLCRWRLERKLQSLL 119
Query: 129 RVALRSPENDPKLK---LFEVL-----VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETC 180
+ S E+ LF+VL V D+L+K + V ++
Sbjct: 120 SEIVGSKESVLGFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDE---A 176
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
+D + RG + +CN L+ + + IYR + KR+
Sbjct: 177 IDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHL---------------KRL 221
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ PN +T+ + R+G FE+ DV+ EM G P+ + S + C +R
Sbjct: 222 -GLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDL 280
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ +R N D AY +I GFC ++ AE+ F +M G+ + L++
Sbjct: 281 GYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIH 340
Query: 361 GYCRAGDVDSAILVYNDMCRKG-----------FEPEGSTIE-----VLIGELCDKRRVF 404
YC+AG++ A+ ++NDM G F G ++ +++ LC +V
Sbjct: 341 AYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVE 400
Query: 405 EALDIL---KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
EA+++L K R + + Y LI G C +GK+ +A + EM +G EP + Y
Sbjct: 401 EAVELLNEMKGRRMSLDVV----HYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTY 456
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFE 486
+ + G+ + G L+KE E
Sbjct: 457 NILVGGFSRNG-------LKKEALE 474
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 117/233 (50%), Gaps = 13/233 (5%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N L+ GF R G ++ ++ + G +P+ +++ ++ C +++EAE
Sbjct: 449 IEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAE 508
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG--------VESSSVT 354
+ DK +E+ Y+ ++ G+C+ +A E F + G VE + +
Sbjct: 509 AFLNTLEDKCLEN----YSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIM 564
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ +CR GD+ A LV++ + +G P+ T ++I C + EA DI +
Sbjct: 565 YGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFN-DM 623
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+ G+ P +Y ++ G + +++A+ + EM+ +G +P + Y+A + G
Sbjct: 624 KERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPG 676
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 119/254 (46%), Gaps = 19/254 (7%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ +V + L+ G+ +G ++++ EM G EPD +Y++L+ F +EA
Sbjct: 413 RMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEA 472
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L + + + ++ + +N II G C G++ AE F + +E+ S +V+G
Sbjct: 473 LELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSA----MVDG 528
Query: 362 YCRAGDVDSAILVYNDMCRKGF--------EPEGSTIEVLIGELC---DKRRVFEALDIL 410
YC+A A +++ + ++G EP LIG C D +R D+L
Sbjct: 529 YCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDML 588
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
R G+ P +Y +I G C + EA + +M +G +P + Y+ +DG+ K
Sbjct: 589 VER----GITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSK 644
Query: 471 EGNVEMATMLRKEM 484
N++ A L EM
Sbjct: 645 TNNLQDAINLYDEM 658
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 8/192 (4%)
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ L++ R V H +++ N ++ E G++ A +R + G+ + T+ +
Sbjct: 178 DALFQTKRRGFVPH-IMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKA 236
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV---FEALDILKARVVKFG 418
CR G+ + A+ V+ +M G P T I LC +R +EAL L+A
Sbjct: 237 LCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPID 296
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
F +Y +I+G C E K++EA V +MV +G P IY A I Y K GN+ A
Sbjct: 297 TF----AYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAV 352
Query: 479 MLRKEMFENQVR 490
L +M N ++
Sbjct: 353 ALHNDMVSNGIK 364
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 70/129 (54%)
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
+ M L EP+ Y L+ FC + M+ A+ +++ + ++ + DV+ Y +I G+C +
Sbjct: 551 LRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRV 610
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
+ A + F +M G++ +T+ +++G+ + ++ AI +Y++M +G +P+ T
Sbjct: 611 NCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTY 670
Query: 391 EVLIGELCD 399
L+ C+
Sbjct: 671 TALLPGKCN 679
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 64/124 (51%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN + L+ F R+G ++ + V+ + G PD +Y++++ +C +REA
Sbjct: 558 VEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREAR 617
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ +M+++ ++ DV+ Y ++ G + + A + EM G++ VT+ L+ G
Sbjct: 618 DIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGK 677
Query: 363 CRAG 366
C G
Sbjct: 678 CNFG 681
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 117/248 (47%), Gaps = 1/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P HT ++ G +E ++V+M GCEP+ Y+Y+ L++ C ++ A
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 375
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ M V + V YN +I E + A MG +G + VT+ ++ GY
Sbjct: 376 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY 435
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C GD A+LV N+M ++G T +I CD AL IL + G P
Sbjct: 436 CILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL-MRDGGCKPD 494
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E SY LI G C+ KME A + EMV G P+ Y+A IDGY K+ ++ AT L +
Sbjct: 495 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 554
Query: 483 EMFENQVR 490
M + R
Sbjct: 555 HMKRSGCR 562
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+N ++ G+ G +K V M + G + +Y+ ++ +C+ A ++
Sbjct: 423 PNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI 482
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ MRD + D +Y +I GFC+I +M A F EM G+ + VT+ L++GYC+
Sbjct: 483 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 542
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+D+A + M R G P T VLI L K+ F + L +++ G+FP
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL-TKQNNFSGAEELCKVMIEEGIFPNVV 601
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I GLC+ G AL++ +M+ +G P+L YS+ I +EG VE A L E+
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 1/245 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV+T+ AL+ G G + ++ M+R G P+ +Y+ L+ + E RR++ A +
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M ++V YN +I G+C +G+ +A M G ++ VT+ ++ GYC
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G+ SA+ + + M G +P+ + LI C ++ A + +V GL P E
Sbjct: 473 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFN-EMVDDGLCPNEV 531
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C++ K++ A + M G P+++ Y+ I G K+ N A L K M
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 485 FENQV 489
E +
Sbjct: 592 IEEGI 596
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 6/212 (2%)
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
++YS L+ + M + V+ +++ YN +I C+ G +A AE ++
Sbjct: 181 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 240
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
+ S + + T+ ++ G+CR D+DSA+ V+N M ++G EP T LI LCD R
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 300
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
V EA D+++ ++ G+ PT + I LC+ G E+A ++ +M KG EP++ Y+
Sbjct: 301 VNEAFDLIREMILH-GILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 359
Query: 463 AFIDGYMKEGNVEMAT-----MLRKEMFENQV 489
A I G G +++A M R +F N V
Sbjct: 360 ALISGLCVSGLLKVAIGLFHRMSRDGVFPNTV 391
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 21/291 (7%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK--DVKRV 240
++ ++ RG S + T N +I GY DS T + D+ R
Sbjct: 447 VMNNMLQRGHSANLVTYNT----------IIKGY--------CDSGNTTSALRILDLMRD 488
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+P+ ++ L+ GF + E ++ EM G P+ +Y+ L+ +C++ ++
Sbjct: 489 GGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDT 548
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L E M+ +V YN +I G + + AEE + M G+ + VT+ +++
Sbjct: 549 ATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMID 608
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ G A+ ++N M +G P T LI L + +V EA ++ A + + GL
Sbjct: 609 GLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF-AELERHGLI 667
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
P E +Y+ +I+ GK+E A M+ G +P+L Y I G E
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 24/325 (7%)
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
LIK C + + + + +D ML GL + + +AL+ +SR
Sbjct: 151 LIKSCHSKEAMARTMSFLD---MLSQSGLRMGLFAYSALLIHLSR--------------L 193
Query: 224 GLDSDATAGIGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
G+ TA + R++ V+PN+ +NA++ ++G E + ++ PD
Sbjct: 194 GM----TAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPD 249
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
++Y+ ++ C + + A +++ +M + E + V Y+T+I G C+ G + A + R
Sbjct: 250 TFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIR 309
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM L G+ ++ T + C G + A ++ DM KG EP T LI LC
Sbjct: 310 EMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG 369
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ A+ + R+ + G+FP +Y LI L E +++ A V M G P++ Y
Sbjct: 370 LLKVAIGLFH-RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTY 428
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFE 486
+ I GY G+ + A ++ M +
Sbjct: 429 NEMIKGYCILGDPKKAMLVMNNMLQ 453
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 1/245 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+R + ++AL++ R G V D + M G +P+ Y+ ++ C++ + +AE
Sbjct: 176 LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAE 235
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +++ + + D Y ++I G C ++ A + F +M G E ++VT+ L+NG
Sbjct: 236 TIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 295
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +G V+ A + +M G P T I LCD +E L + G P
Sbjct: 296 CDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG-CYEDAWRLFVDMKNKGCEPN 354
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI GLC G ++ A+ + M G P+ Y+A I+ ++ ++ A ++
Sbjct: 355 VYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLN 414
Query: 483 EMFEN 487
M N
Sbjct: 415 LMGRN 419
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 118/264 (44%), Gaps = 23/264 (8%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPNV T+N L+ G ++ F E++ M G P+ +Y+ ++ C+ A +
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ +M ++ +++ Y+++I + G++ AE F E+ G+ +T+ ++ Y
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL------CDKRRVF------------- 404
+G V+ A M + G +P T VLI L D+R
Sbjct: 682 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQ 741
Query: 405 ----EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+A+ ++ A++ + + + L+ L G+ EA ++ M+ +G P E
Sbjct: 742 TTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEA 801
Query: 461 YSAFIDGYMKEGNVEMATMLRKEM 484
Y++ + ++ NV++A + K M
Sbjct: 802 YNSLLCSLLRVRNVDLAMGVFKHM 825
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 143/357 (40%), Gaps = 76/357 (21%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
EK++T ++ + G V T N LI +++ + SG E +V +
Sbjct: 544 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK-QNNFSGAEELCKVMIEEG------- 595
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+ PNV T+ A++ G + G+ +++ +M GC P+ +YS L+ +
Sbjct: 596 --------IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E ++ EAE L+ E+ + D + Y +I + G++ A F M +G + + T
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707
Query: 355 FEHLVNG----YCRAGDVDSAILVYNDMCRKGFEPE-----------------GSTIEV- 392
+ L+ G Y A +A+ C G++ G +++V
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 393 --LIGELCDKRRVFEALDILKARVVKFGLFPTEKSY------------------MF---- 428
L+ L R FEA ++L + + + GL P +++Y +F
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQ-GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 826
Query: 429 -------------LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
LI LC+ + +EA M+ + + P + + IDG +++G
Sbjct: 827 TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 38/99 (38%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +N+L+ R + V+ M+ GCE Y L+ C+ R +EA
Sbjct: 797 PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARIT 856
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+E M + D V +I G G EF M
Sbjct: 857 FENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM 895
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 131/247 (53%), Gaps = 1/247 (0%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T+N L+ + +G + ++ EM G PD ++Y++L+ C+E +++A +++E
Sbjct: 179 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 238
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M + V VV Y ++I + G++ ++ F E G+ V + L+N + +G
Sbjct: 239 NMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 298
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++D A + +M +K P+ T L+ LC RV EA ++ + K G+ P +Y
Sbjct: 299 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID-EMTKRGIQPDLVTY 357
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI G +G +++AL+++ EM+ KGF P+L Y+A I G K G + A + KEM E
Sbjct: 358 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 417
Query: 487 NQVRQED 493
N + +D
Sbjct: 418 NGITPDD 424
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 167/366 (45%), Gaps = 39/366 (10%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+Y T+I + + A V L E P+ ++ L+ Y + G
Sbjct: 110 TYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG----------- 158
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV-SRGKGVISGYEIYREVFGL 225
K++T + ++ RG+++ V+T N L+ + G+G YE+ E+ G
Sbjct: 159 ---------KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT-EAYELVEEMGG- 207
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
G+ P+V T+N L+ G +EG +K +++ M+R G +Y
Sbjct: 208 -----KGLA----------PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 252
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ L+ ++ +++E +KL++E + + D+V YN +I G + RA E EM
Sbjct: 253 TSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 312
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
+ VT+ L+ G C G VD A + ++M ++G +P+ T LI K V +
Sbjct: 313 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKD 372
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
AL I + ++ G PT +Y LI+GLC+ G+ ++A + EMV G P Y + I
Sbjct: 373 ALRI-RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 431
Query: 466 DGYMKE 471
+G E
Sbjct: 432 EGLTTE 437
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 138/314 (43%), Gaps = 73/314 (23%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEM-ARLGCEPDCYSYSVLMAVFCEERRMREAE 302
RPN T+N ++ GF G + D+ EM R G P+ Y+Y +++ +C+ R+ EA
Sbjct: 69 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128
Query: 303 KLWEEMRDKN-VEHDVVAYNTIIGGFCEIGEM---------------------------- 333
K+++EM K V+ + V YN +IGG+C+ G++
Sbjct: 129 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 188
Query: 334 -------ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
A E EMG G+ T+ L+NG+C+ G+V A+ ++ +M R+G
Sbjct: 189 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 248
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFG---------------------------- 418
T LI L K +V E D L V+ G
Sbjct: 249 VVTYTSLIYALSKKGQVQET-DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 307
Query: 419 -------LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ P + +Y L++GLC G+++EA K+ EM +G +P L Y+ I GY +
Sbjct: 308 GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMK 367
Query: 472 GNVEMATMLRKEMF 485
G+V+ A +R EM
Sbjct: 368 GDVKDALRIRNEMM 381
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 121/225 (53%), Gaps = 11/225 (4%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
++ +M RL ++++++ C + A +L +M N V YNT+I GFC
Sbjct: 28 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNA----VTYNTVIAGFC 83
Query: 329 EIGEMARAEEFFREMG-LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG-FEPE 386
G + A + REM G+ + T+ +++G+C+ G VD A+ V+++M KG +PE
Sbjct: 84 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 143
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
LIG CD+ ++ AL + + R+V+ G+ T +Y L+ L +G+ EA ++
Sbjct: 144 AVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 202
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
EM GKG P + Y+ I+G+ KEGNV+ A E+FEN R+
Sbjct: 203 EEMGGKGLAPDVFTYNILINGHCKEGNVKKAL----EIFENMSRR 243
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 125/307 (40%), Gaps = 48/307 (15%)
Query: 38 SHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIAL----GLKNNPHLALRFFS 93
++NL+ V +L R + + + GL P F+ L + N AL F
Sbjct: 181 TYNLL--VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 238
Query: 94 FTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRE 153
+ + + ++ +Y ++I+ LS+ + + A+R P L L+ L+ ++
Sbjct: 239 NMSRRGV-RATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIR-PDLVLYNALINSHST 296
Query: 154 CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSV--KVSTCNALIWEVSRGKG 211
G+ F+++ + +E K I D+ + RGL + +V LI E+++ +G
Sbjct: 297 SGNIDRAFEIMGE--MEKKRIAPD----DVTYNTLMRGLCLLGRVDEARKLIDEMTK-RG 349
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
+ +P++ T+N L+ G+ +G + +
Sbjct: 350 I-------------------------------QPDLVTYNTLISGYSMKGDVKDALRIRN 378
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM G P +Y+ L+ C+ + +AE + +EM + + D Y ++I G
Sbjct: 379 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 438
Query: 332 EMARAEE 338
E A +E
Sbjct: 439 ERAIDDE 445
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 127/250 (50%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ +TFN L+ + G +K ++ EM G +PD +Y ++A C +M +A
Sbjct: 403 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 462
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + +M D+ V D AYN +I GFC G + +A+E E+ +G+ V F ++N
Sbjct: 463 EKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 522
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G V A +++ G P+ +L+ C ++ +AL + A +V G+ P
Sbjct: 523 CKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA-MVSAGIEPN 581
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y L+ G C+ G+++E L + EM+ +G +PS +YS IDG + G A M
Sbjct: 582 VVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFH 641
Query: 483 EMFENQVRQE 492
EM E+ + +
Sbjct: 642 EMTESGIAMD 651
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 142/298 (47%), Gaps = 17/298 (5%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+ D+ + ++ RG+ + T N+++ + + + + R++
Sbjct: 248 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN------------ 295
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
RV PN T+N L+ G+ G +++ V+ EM R PD + S+LM C+
Sbjct: 296 ----KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 351
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+++EA +++ M K DV +YN ++ G+ G + + F M G+ TF
Sbjct: 352 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFN 411
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L+ Y G +D A++++N+M G +P+ T +I LC ++ +A++ +++
Sbjct: 412 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFN-QMID 470
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
G+ P + +Y LI+G C G + +A ++ +E++ G + +S+ I+ K G V
Sbjct: 471 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 528
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 126/250 (50%), Gaps = 3/250 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG--CEPDCYSYSVLMAVFCEERRMREAE 302
P+V +++ L+ +G + +D+ MA G C P+ +Y+ ++ F +E + +A
Sbjct: 193 PDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKAC 252
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++EM + + D+V YN+++ C+ M +AE F R+M V ++ T+ +L+ GY
Sbjct: 253 DLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGY 312
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G A+ V+ +M R P+ T+ +L+G LC ++ EA D+ +K G P
Sbjct: 313 SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK-GQNPD 371
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY ++ G +G + + + M+G G P ++ I Y G ++ A ++
Sbjct: 372 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 431
Query: 483 EMFENQVRQE 492
EM ++ V+ +
Sbjct: 432 EMRDHGVKPD 441
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 34/277 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV +N ++ GF++EG K D++ EM + G PD +Y+ ++ C+ R M +AE
Sbjct: 230 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 289
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M +K V + YN +I G+ G+ A F+EM + VT L+ C+
Sbjct: 290 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 349
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFEAL----------- 407
G + A V++ M KG P+ + +++ G L D +F+ +
Sbjct: 350 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 409
Query: 408 -DIL-----------KARVV-----KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
++L KA ++ G+ P +Y +I LC GKM++A++ +M+
Sbjct: 410 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 469
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+G P Y+ I G+ G++ A L E+ N
Sbjct: 470 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNN 506
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 156/361 (43%), Gaps = 46/361 (12%)
Query: 139 PKLKLFEVLVKTYRECG---SAPFVFD----------------LLIKCCLEVKNIEKIET 179
P F VL+K Y CG A +F+ ++ C I K++
Sbjct: 405 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC----RIGKMDD 460
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
++ ++ +G++ N LI ++ E+ E+ G+ D+
Sbjct: 461 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM------NNGMHLDIV- 513
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
F++++ + G ++++ +G PD YS+LM +C +M
Sbjct: 514 ---------FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKME 564
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A ++++ M +E +VV Y T++ G+C+IG + FREM G++ S++ + ++
Sbjct: 565 KALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIII 624
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVK 416
+G +AG A + +++M G + T +++ L R EA+ + L+A VK
Sbjct: 625 DGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVK 684
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
+ +I G+ + ++EEA + A + P++ YS I +KEG VE
Sbjct: 685 INIITLNT----MIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEE 740
Query: 477 A 477
A
Sbjct: 741 A 741
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 156/352 (44%), Gaps = 26/352 (7%)
Query: 125 RDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVD 182
R VI R + D ++ F ++ G AP + ++ LI+ ++ K + +
Sbjct: 446 RTVIAALCRIGKMDDAMEKFNQMIDQ----GVAPDKYAYNCLIQGFCTHGSLLKAK---E 498
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
++ +M+ G+ + + +++I + + V+ I+ D T +G
Sbjct: 499 LISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF--------DLTVNVG-------- 542
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ ++ LM G+ G EK V+ M G EP+ Y L+ +C+ R+ E
Sbjct: 543 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 602
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ EM + ++ + Y+ II G + G A+ F EM SG+ T+ ++ G
Sbjct: 603 SLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGL 662
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ D AI ++ ++ + T+ +I + RRV EA D+ A + + L P
Sbjct: 663 FKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF-ASISRSRLVPN 721
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+Y +I L +EG +EEA + + M G EP+ + + + +K+ +
Sbjct: 722 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEI 773
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
R G + +S T+ L++ RA + A+ + + R G L+ C+
Sbjct: 113 RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEA 172
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA---LKVQAEMVGKGFEPS 457
+R EALDIL R + G P SY L+K LC++GK +A L++ AE G P+
Sbjct: 173 KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG-GAVCSPN 231
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ Y+ IDG+ KEG+V A L KEM + +
Sbjct: 232 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI 263
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 77/168 (45%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ T+N ++ G ++ F++ ++ E+ + + + + + ++ + RR+ EA+ L+
Sbjct: 651 DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 710
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ + +VV Y+ +I + G + AE+ F M +G E +S H+V +
Sbjct: 711 ASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKK 770
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
++ A + + + F E T +L+ K E + L A+
Sbjct: 771 NEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPAK 818
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 1/252 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+NALM G++ K ++V+ MA++G D +SYSV+++ + + + EA
Sbjct: 290 VGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAM 349
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+E MR++NV DVVAY+++I G C+ G + A ++ EM G + +T+ L++
Sbjct: 350 DLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDAL 409
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++ VD AI + + +G + T +L+ LC R+ +A + + ++K G
Sbjct: 410 CKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMK-GHNVD 468
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I GLC+E +EAL + ++M KG P Y I+ + ++ + A L +
Sbjct: 469 VVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLR 528
Query: 483 EMFENQVRQEDG 494
EM + +++G
Sbjct: 529 EMIDCVDYKDNG 540
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 127/278 (45%), Gaps = 36/278 (12%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
RV PNV T+ +L+ GF G +K + EM P+ +++ L+ C+E +MREA
Sbjct: 219 RVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREA 278
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE------------ 349
+ L M + V DV YN ++ G+ + E +A+ F M GV
Sbjct: 279 KSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISG 338
Query: 350 -----------------------SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
V + L++G C++G ++SA+ ++M +G P
Sbjct: 339 LSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPN 398
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T LI LC +V +A+ +LK ++ G+ +Y L+ GLC++G++ +A KV
Sbjct: 399 VITYTSLIDALCKSHQVDKAIALLK-KIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVF 457
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+++ KG + YS I+G KE + A L +M
Sbjct: 458 QDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKM 495
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 122/247 (49%), Gaps = 1/247 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RP+V +N ++ G ++ D++ EM P+ +Y+ L+ FC ++ +A
Sbjct: 186 RPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFG 245
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L EM KNV +V +NT++ G C+ G+M A+ M GV T+ L++GY
Sbjct: 246 LLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYF 305
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ A V+N M + G + + V+I L + + EA+D+ + + + P
Sbjct: 306 LVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEG-MRNENVIPDV 364
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI GLC+ G++ ALK EM +G P++ Y++ ID K V+ A L K+
Sbjct: 365 VAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKK 424
Query: 484 MFENQVR 490
+ + ++
Sbjct: 425 IKDQGIQ 431
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ N T N L+ + V+ ++ +LG +PD +Y+ L+ C +++E+
Sbjct: 80 IQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESL 139
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + + ++ D V+Y T+I G C+IG+ A R++ V + +++G
Sbjct: 140 NFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGL 199
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ V A +Y +M K P T LI C ++ +A +L V+K + P
Sbjct: 200 CKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLK-NVNPN 258
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
++ L+ GLC+EGKM EA + A M+ +G P + Y+A +DGY
Sbjct: 259 VCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGY 304
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 122/258 (47%), Gaps = 11/258 (4%)
Query: 238 KRVVRVRPN--VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R++R+RP + F ++ + + V ++ M G + + + ++L+ +C
Sbjct: 38 NRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHL 97
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R++ A ++ ++ + D++ Y T+I G C G++ + F + G++ V++
Sbjct: 98 RQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSY 157
Query: 356 EHLVNGYCRAGDVDSAIL----VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
L+NG C+ G A+ + ++CR P+ +I LC + V +A D L
Sbjct: 158 GTLINGLCKIGQTGPALRLLRKIEGEICR----PDVVMYNTIIDGLCKDKLVRDAFD-LY 212
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ + +FP +Y LI G C G++++A + EMV K P++ ++ +DG KE
Sbjct: 213 CEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKE 272
Query: 472 GNVEMATMLRKEMFENQV 489
G + A L M + V
Sbjct: 273 GKMREAKSLVAVMMKEGV 290
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 116/277 (41%), Gaps = 34/277 (12%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P++ T+ L+ G G ++ + + G + D SY L+ C+ + A +
Sbjct: 116 QPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALR 175
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L ++ + DVV YNTII G C+ + A + + EM V + VT+ L+ G+C
Sbjct: 176 LLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFC 235
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL------------- 410
G +D A + N+M K P T L+ LC + ++ EA ++
Sbjct: 236 IVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVF 295
Query: 411 ----------------KARVV-----KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
KA+ V + G+ SY +I GL + ++EA+ + M
Sbjct: 296 TYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGM 355
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ P + YS+ IDG K G + A EM +
Sbjct: 356 RNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHD 392
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 152/319 (47%), Gaps = 21/319 (6%)
Query: 175 EKIETCVDIV-RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
++++ +DI+ R + G V +CN L+ + K V E+ L + A G
Sbjct: 139 KRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALEL------LHTMAEDGG 192
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
G PNV T+N ++ G + A ++ E V M G + D +YS ++ C
Sbjct: 193 GN-------CTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLC 245
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + + AE + + M DK V+ DVV YNTII G C+ + RAE + M GV+ V
Sbjct: 246 KAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV 305
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI-GELC--DKRRVFEALDIL 410
T+ +++G C+A VD A V M K +P+ T LI G L + + V L+ +
Sbjct: 306 TYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEM 365
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
AR GL P +Y L+ LC+ GK EA K+ M+ KG +P++ IY + GY
Sbjct: 366 YAR----GLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAA 421
Query: 471 EGNVEMATMLRKEMFENQV 489
G + T L M N +
Sbjct: 422 RGAIADLTDLLDLMVANGI 440
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 128/258 (49%), Gaps = 9/258 (3%)
Query: 223 FGLDSDATAGIGKDVKRVVR--------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
+G+ DA +G+ V++ V PN FN+L+ G +EK E+++ EM
Sbjct: 482 YGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMW 541
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
G P+ ++ +M C E ++ A++L + M V +V++YNT+IGG C G
Sbjct: 542 DQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTD 601
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
A + M G++ ++++ L+ GYC+ G +D+A ++ +M RKG P T ++
Sbjct: 602 EAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTIL 661
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
L RR EA + L ++K G +Y ++ GLC+ ++EA K+ + K
Sbjct: 662 QGLFHTRRFSEAKE-LYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDL 720
Query: 455 EPSLEIYSAFIDGYMKEG 472
P++ ++ ID K G
Sbjct: 721 RPNIITFTIMIDVLFKGG 738
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV + L+ G+ GA + D+ M G P+ Y +++++ + ++ + EA
Sbjct: 405 IKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAM 464
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ M + DVV Y +I C++G + A F +M GV +SV F LV G
Sbjct: 465 HIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGL 524
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C + A ++ +M +G P ++ LC++ +V A ++ + + + G+ P
Sbjct: 525 CTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDS-MERVGVRPN 583
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY LI G C G+ +EA ++ MV G +P L Y + GY K G ++ A L +
Sbjct: 584 VISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFR 643
Query: 483 EMFENQV 489
EM V
Sbjct: 644 EMLRKGV 650
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 148/309 (47%), Gaps = 19/309 (6%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+++ ++ +G+ V T N +I + + + V + + + I KDVK
Sbjct: 291 VLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHM----------IDKDVK---- 336
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
P++ T+N L+ G+ G +++V EM G +PD +YS+L+ C+ + EA
Sbjct: 337 --PDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEAR 394
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++ M K ++ +V Y ++ G+ G +A + M +G+ ++ F ++ Y
Sbjct: 395 KIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAY 454
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK-ARVVKFGLFP 421
+ +D A+ +++ M + G P+ T +LI LC RV +A +LK +++ G+ P
Sbjct: 455 AKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDA--VLKFNQMINDGVTP 512
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ L+ GLC + E+A ++ EM +G P++ ++ + EG V +A L
Sbjct: 513 NSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLI 572
Query: 482 KEMFENQVR 490
M VR
Sbjct: 573 DSMERVGVR 581
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 1/237 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V VRPNV ++N L+ G G ++ + M +G +PD SY L+ +C+ R+
Sbjct: 578 VGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDN 637
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L+ EM K V V Y+TI+ G + A+E + M SG + T+ ++N
Sbjct: 638 AYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILN 697
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ VD A ++ +C K P T ++I L R +A+D+ A + GL
Sbjct: 698 GLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLF-ASIPSHGLV 756
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P +Y ++K + +EG ++E + M G P + +A I + G + A
Sbjct: 757 PNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRA 813
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 119/255 (46%), Gaps = 5/255 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+VRP++ T++ L F R G E + + + G + + L+ C+ +R+ EA
Sbjct: 85 KVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEA 144
Query: 302 -EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG---VESSSVTFEH 357
+ L M + +VV+ NT++ G C + A E M G + VT+
Sbjct: 145 MDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNT 204
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
+++G C+A VD A V M KG + + T +I LC + V A +L+ + K
Sbjct: 205 IIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDK- 263
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G+ P +Y +I GLC+ ++ A V M+ KG +P + Y+ IDG K V+ A
Sbjct: 264 GVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRA 323
Query: 478 TMLRKEMFENQVRQE 492
+ + M + V+ +
Sbjct: 324 DGVLQHMIDKDVKPD 338
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RPN+ TF ++ ++ G + D++ + G P+ +Y ++M +E + E +
Sbjct: 720 LRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFD 779
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR---EMGLSGVESSSVTF 355
L+ M D V N II GE+ RA + EM S +E+S+ +
Sbjct: 780 NLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFS-LEASTTSL 834
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 158/327 (48%), Gaps = 20/327 (6%)
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
+ LI C + +++ V+I + G+ V T N+L+ +
Sbjct: 190 YTTLIHCLCKNRHLNH---AVEIFNQMGDNGIRPNVVTYNSLVSGLCE------------ 234
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
G SDA + +KR ++PNV TF AL+ F + G + ++++ M ++ P
Sbjct: 235 --IGRWSDAAWLLRDMMKR--GIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYP 290
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D ++Y+ L+ C R+ EA +++ M + V Y T+I GFC+ + + F
Sbjct: 291 DVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIF 350
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
EM G+ ++++T+ L+ GYC G D A V+N M + P+ T VL+ LC
Sbjct: 351 YEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYN 410
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
V +AL I K + K + +Y +I+G+C+ GK+E+A + + KG +P++
Sbjct: 411 GYVEKALMIFKY-MRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVIT 469
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFEN 487
Y+ I G+ + G + A L K+M E+
Sbjct: 470 YTTMISGFCRRGFIHEADALFKKMKED 496
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 175/394 (44%), Gaps = 23/394 (5%)
Query: 92 FSFTQHK-SLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKT 150
F +H+ + H S ++ R R ++R L + + + L LF +V +
Sbjct: 17 FHLHRHRLQISNHGASPTLSLCGFCFWIRAFSNYRKILRNGLHNLQFNEALDLFTRMVHS 76
Query: 151 YRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
P + D + + +++ + + + + G+S + TCN ++ V R
Sbjct: 77 R----PLPSIVDF-TRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSS 131
Query: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
A+ +GK +K + P++ TF +L+ GF E ++
Sbjct: 132 Q--------------PCRASCFLGKMMK--LGFEPDLVTFTSLLHGFCHWNRIEDALALF 175
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
++ +G P+ +Y+ L+ C+ R + A +++ +M D + +VV YN+++ G CEI
Sbjct: 176 DQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEI 235
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G + A R+M G++ + +TF L++ + + G + A +Y M + P+ T
Sbjct: 236 GRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTY 295
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
LI LC R+ EA + + G +P E +Y LI G C+ ++E+ K+ EM
Sbjct: 296 TALINGLCTYGRLDEARQMFYL-MESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMS 354
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
KG + Y+ I GY G ++A + +M
Sbjct: 355 QKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQM 388
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 130/275 (47%), Gaps = 17/275 (6%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
++R +M RG+ V T ALI + ++ E+Y+ + +
Sbjct: 244 LLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMS---------------- 287
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+ AL+ G G ++ ++ M G P+ +Y+ L+ FC+ +R+ +
Sbjct: 288 VYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGT 347
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++ EM K + + + Y +I G+C +G A+E F +MG T+ L++G
Sbjct: 348 KIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGL 407
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G V+ A++++ M ++ + T ++I +C +V +A D+ + K G+ P
Sbjct: 408 CYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSK-GMKPN 466
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+Y +I G C G + EA + +M GF P+
Sbjct: 467 VITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 76/143 (53%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+ L+ G+ G + ++V+ +M PD +Y+VL+ C + +A ++
Sbjct: 361 NTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIF 420
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ MR + ++ ++V Y II G C++G++ A + F + G++ + +T+ +++G+CR
Sbjct: 421 KYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 480
Query: 366 GDVDSAILVYNDMCRKGFEPEGS 388
G + A ++ M GF P S
Sbjct: 481 GFIHEADALFKKMKEDGFLPNES 503
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 1/159 (0%)
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A + F M S S V F L++ + D I ++ M G P T
Sbjct: 62 QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+++ +C + A L +++K G P ++ L+ G C ++E+AL + ++VG
Sbjct: 122 IVMNCVCRSSQPCRASCFL-GKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVG 180
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
GF P++ Y+ I K ++ A + +M +N +R
Sbjct: 181 MGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIR 219
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 132/251 (52%), Gaps = 7/251 (2%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
+ + V P+V ++ +L+ GF R G ++ + ++ EM +G +PD ++SVL+ + C+E ++
Sbjct: 666 KALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKV 725
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EA +L E M + + V Y T++ G C ++ A + F +M G VT+ L
Sbjct: 726 IEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTL 785
Query: 359 VNGYCRAGDVDSAILVYNDMCRK------GFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
+ G C+ G++ +A+ ++ M F+P+ + ++I LC R EA ++ K
Sbjct: 786 MKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFK- 844
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ G+ P SY LI G C GK+E+A + EMV +G + + YS I G+ KEG
Sbjct: 845 EMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEG 904
Query: 473 NVEMATMLRKE 483
++ A + E
Sbjct: 905 QIDKALFQKME 915
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 131/253 (51%), Gaps = 8/253 (3%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V ++ +L+ GF G +EK + ++ EM +G +PD + VL+ +FC+E ++ EA +L
Sbjct: 198 PDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANEL 257
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M + D+V Y+T+I G C ++ A + F M G ++ + L+ G C+
Sbjct: 258 LEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQ 317
Query: 365 AGDVDSAILVYNDMCR-------KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
G ++ A+ ++ +M K P+ +T +LI LC + +V EA ++L+ +++
Sbjct: 318 TGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEV-MIQR 376
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G +Y LIKGLC E ++ EA + M G P Y + G + GN+ +A
Sbjct: 377 GCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIA 436
Query: 478 TMLRKEMFENQVR 490
L +EM + R
Sbjct: 437 LQLHQEMLNDTGR 449
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 168/357 (47%), Gaps = 26/357 (7%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNI---EKIETCVDIVRMLMSRGLSVKVST 198
KL EV+++ R C + D+ + C VK + +I + + G V T
Sbjct: 549 KLLEVVIQ--RGC-----ILDV-VTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVT 600
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
C L+ + + + E+++ + SD T+ G + +PN +++ ++ G
Sbjct: 601 CATLMKGLCQSGNIKIALELHKNML---SD-TSPYG------INCKPNAISYSIIIDGLC 650
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ G ++ +++ EM LG PD SY+ L+ FC + ++A+ L+ EM D V+ DV
Sbjct: 651 KCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVT 710
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
++ +I C+ G++ A E M G ++VT+ LV G C + A ++ M
Sbjct: 711 TFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKM 770
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF-----PTEKSYMFLIKGL 433
+ G P+ T L+ LC + AL++ K + G + P SY +I GL
Sbjct: 771 QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGL 830
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
C+ G+ +EA ++ EM G P++ Y++ I G+ + G +E A L EM + V+
Sbjct: 831 CKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQ 887
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 129/256 (50%), Gaps = 14/256 (5%)
Query: 244 RPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLG--CEPDCYSYSVLMAVFCEERR 297
RP+ T+ LM G + G A + +++ + R G C+P SYS+++ C++RR
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
EA +L++EM+ + + DV++Y ++I GFC G+ +A+ F EM G++ T
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++ +C+ G V A + M +G + T LI LC K R+ EA + + + K
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMS-MKKL 299
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG-------KGFEPSLEIYSAFIDGYMK 470
G P +Y L+KGLC+ GK+ AL + EM+ K P + S ID K
Sbjct: 300 GCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCK 359
Query: 471 EGNVEMATMLRKEMFE 486
EG V A L + M +
Sbjct: 360 EGKVIEANELLEVMIQ 375
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 161/341 (47%), Gaps = 29/341 (8%)
Query: 159 FVFDLLIKCCLEVKNI-EKIETCVDIVRM-----LMSRGLSVKVSTCNALIWEVSRGKGV 212
F F++LI C VK + E + I+R +++ + V+T + LI + + V
Sbjct: 11 FTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKV 70
Query: 213 ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
I E+ EV ++R + ++ T++ L+ G E + +++
Sbjct: 71 IEANELL-EVM-------------IQRGCIL--DIVTYSTLIKGLCMEHRISEATWLFMS 114
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV------VAYNTIIGG 326
M +LGC PD +Y LM C+ + A +L +EM + + + ++Y+ II G
Sbjct: 115 MQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDG 174
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
C+ A E F+EM G+ +++ L++G+C +G + A ++N+M G +P+
Sbjct: 175 LCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPD 234
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
+T VLI C + +V EA ++L+ V + G +Y LIKGLC + ++ EA ++
Sbjct: 235 VTTSGVLIDMFCKEGKVIEANELLEVMVHR-GCILDIVTYSTLIKGLCMKHRISEATQLF 293
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
M G P Y + G + G + +A L +EM +
Sbjct: 294 MSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLND 334
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 130/253 (51%), Gaps = 13/253 (5%)
Query: 244 RPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLG--CEPDCYSYSVLMAVFCEERR 297
RP+ T+ LM G + G A + +++ + R G C+P SYS+++ C++RR
Sbjct: 414 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 473
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
EA +L+EEM+ + + DV++Y T+I GFC G+ +A+ F EM G++ T
Sbjct: 474 EDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSV 533
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++ C+ G V A + + ++G + T L+ LC K R+ +A + ++ K
Sbjct: 534 LIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLF-LKMQKL 592
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV------GKGFEPSLEIYSAFIDGYMKE 471
G P + L+KGLC+ G ++ AL++ M+ G +P+ YS IDG K
Sbjct: 593 GCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKC 652
Query: 472 GNVEMATMLRKEM 484
G + A L KEM
Sbjct: 653 GREDEARELFKEM 665
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 128/286 (44%), Gaps = 42/286 (14%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RP+V T + L+ +EG + ++ M + GC D +YS L+ C E R+ EA
Sbjct: 343 IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEAT 402
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA---------------------------- 334
L+ M+ D + Y T++ G C+ G +
Sbjct: 403 WLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYS 462
Query: 335 -------------RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
A E F EM G+ +++ L++G+C +G + A ++N+M
Sbjct: 463 IIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 522
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G +P+ +T VLI LC K +V EA +L+ V++ G + L+KGLC + ++ +
Sbjct: 523 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEV-VIQRGCILDVVTCTTLVKGLCMKHRISK 581
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
A ++ +M G P++ + + G + GN+++A L K M +
Sbjct: 582 ATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSD 627
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 208/457 (45%), Gaps = 44/457 (9%)
Query: 49 LTHHRSKSRWNHLLSLCRSGLTP--TQFSQIALGL--KNNPHLALRFF-----SFTQHKS 99
+ H S++ W +S+ + G P + + GL N ++AL+ ++
Sbjct: 101 MEHRISEATW-LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGI 159
Query: 100 LCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECG---S 156
CK +L SY+ II L + R AR++ + +++ P + + L+ + G
Sbjct: 160 KCKPTLISYSIIIDGLCKDRREDEARELFK-EMKAQGMMPDVISYTSLIHGFCHSGKWEK 218
Query: 157 APFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGY 216
A +F+ + L+V + T ++ M G KV N L+ EV +G I
Sbjct: 219 AKCLFNEM----LDVGIQPDVTTSGVLIDMFCKEG---KVIEANELL-EVMVHRGCILDI 270
Query: 217 EIYREVF-GL-----DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG----AFEKV 266
Y + GL S+AT + +K+ + RP+ + LM G + G A
Sbjct: 271 VTYSTLIKGLCMKHRISEATQ-LFMSMKK-LGCRPDAIAYGTLMKGLCQTGKINIALHLH 328
Query: 267 EDVWVEMARLGCE---PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
+++ + ++ G + PD + S+L+ + C+E ++ EA +L E M + D+V Y+T+
Sbjct: 329 QEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTL 388
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY----NDMC 379
I G C ++ A F M G ++T+ L+ G C+ G+++ A+ ++ ND
Sbjct: 389 IKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTG 448
Query: 380 RKGF--EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
R G +P + ++I LC RR EA ++ + + G+ P SY LI G C G
Sbjct: 449 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQ-GIMPDVISYTTLIHGFCLSG 507
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
K E+A + EM+ G +P + S ID K+G V
Sbjct: 508 KWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKV 544
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 12/259 (4%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ T++ L+ G + + +++ M +LGC PD +Y LM C+ ++ A L
Sbjct: 269 DIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLH 328
Query: 306 EEMRD-------KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+EM + K + DV + +I C+ G++ A E M G VT+ L
Sbjct: 329 QEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTL 388
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+ G C + A ++ M + G P+ T L+ LC + AL + + + G
Sbjct: 389 IKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTG 448
Query: 419 LF-----PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+ PT SY +I GLC++ + +EA ++ EM +G P + Y+ I G+ G
Sbjct: 449 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGK 508
Query: 474 VEMATMLRKEMFENQVRQE 492
E A L EM + ++ +
Sbjct: 509 WEKAKCLFNEMLDVGIQPD 527
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 108/255 (42%), Gaps = 51/255 (20%)
Query: 280 PDCYSY--------------------------------------------SVLMAVFCEE 295
PD +++ S+L+ + C+E
Sbjct: 8 PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
++ EA +L E M + D+V Y+T+I G C ++ A F M G ++T+
Sbjct: 68 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 127
Query: 356 EHLVNGYCRAGDVDSAILVY----NDMCRKGF--EPEGSTIEVLIGELCDKRRVFEALDI 409
L+ G C+ G+++ A+ ++ ND R G +P + ++I LC RR EA ++
Sbjct: 128 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 187
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
K + G+ P SY LI G C GK E+A + EM+ G +P + ID +
Sbjct: 188 FKEMKAQ-GMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFC 246
Query: 470 KEGNVEMATMLRKEM 484
KEG V A L + M
Sbjct: 247 KEGKVIEANELLEVM 261
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF---------EPEGSTIEVL 393
M L+G+ S TF L+N C V+ + + R+G+ P+ +T +L
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
I LC + +V EA ++L+ +++ G +Y LIKGLC E ++ EA + M G
Sbjct: 61 IDILCKEGKVIEANELLEV-MIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLG 119
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
P Y + G + GN+ +A L +EM + R
Sbjct: 120 CRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGR 156
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 125/250 (50%), Gaps = 1/250 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEERRMREAEK 303
P+ T N L+ G R K +V + R G C P+ +Y+ +++ +C+ +M +A
Sbjct: 248 PDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMS 307
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ +M + + V YN +I G+ + +M A +R++ L VTF L++GYC
Sbjct: 308 VYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYC 367
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G +D A ++ +M +P T ++I LC + R EALDIL+ ++ + P
Sbjct: 368 RCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQT 427
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
Y +I LC+ GK++EA + +M KG P Y+ I G+ +G + A L +
Sbjct: 428 FIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHK 487
Query: 484 MFENQVRQED 493
M E R ++
Sbjct: 488 MVEAGCRPDN 497
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 151/313 (48%), Gaps = 20/313 (6%)
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
F+++IK + N +K +++V + G S T N L+ + R K V G+E+ R
Sbjct: 218 FNVVIKGVCRMGNFQK---ALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLR 274
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
+ +R PN T+ +++ G+ + G E V+ +M G P
Sbjct: 275 RL---------------QRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRP 319
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+ +Y+VL+ + + M A +++ ++ ++ DVV ++++I G+C G++ A+ +
Sbjct: 320 NTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIW 379
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM-CRKGFEPEGSTIEVLIGELCD 399
+EMGL ++ + TF +++ C+ A+ + ++ R P+ +I LC
Sbjct: 380 KEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCK 439
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+V EA +++ + + G P + +Y LI G C +G++ EA+ + +MV G P
Sbjct: 440 GGKVDEA-NLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCRPDNI 498
Query: 460 IYSAFIDGYMKEG 472
++F+ +K G
Sbjct: 499 TVNSFVSCVLKAG 511
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 3/232 (1%)
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE-MRDKNVEHDVVA 319
G + + + +RLGC + Y+Y+ L+ R ++A L+E ++D DV +
Sbjct: 158 GLLDAASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWS 217
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+N +I G C +G +A E M G ++T LV+G CRA V+ V +
Sbjct: 218 FNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQ 277
Query: 380 RKGF-EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
R G P T +I C ++ +A+ + +++ G P +Y LI G +
Sbjct: 278 RDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYN-DMLESGTRPNTVTYNVLINGYGKALD 336
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
ME A+++ +++ + P + +S+ IDGY + G ++ A + KEM + ++
Sbjct: 337 MESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQ 388
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 39/248 (15%)
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN----------------------- 312
L P SY ++A C R R+A KL+++M D++
Sbjct: 102 LSVPPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLD 161
Query: 313 -------------VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV-TFEHL 358
+ AYN ++ G A F G+ S V +F +
Sbjct: 162 AASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVV 221
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+ G CR G+ A+ + M G P+ T +L+ LC ++V + ++L+ R+ + G
Sbjct: 222 IKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLR-RLQRDG 280
Query: 419 L-FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ P +Y +I G C+ GKME+A+ V +M+ G P+ Y+ I+GY K ++E A
Sbjct: 281 VCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESA 340
Query: 478 TMLRKEMF 485
+ +++
Sbjct: 341 VRMYRQLI 348
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 4/123 (3%)
Query: 236 DVKRVVRVR----PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
D+ R + +R P +N ++ + G ++ + +M GC PD Y+Y++L+
Sbjct: 412 DILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIG 471
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C + R+ EA L+ +M + D + N+ + + G ++ G+ S
Sbjct: 472 HCMKGRIPEAITLFHKMVEAGCRPDNITVNSFVSCVLKAGMPNEVDQIMLIASGHGLASQ 531
Query: 352 SVT 354
V+
Sbjct: 532 KVS 534
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 197/467 (42%), Gaps = 83/467 (17%)
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGP--ARDVIR--VALRSPENDPK 140
PHLA + + + + SL + ++ L+R+ P + D R VALR P
Sbjct: 147 PHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRL---HPN 203
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
F +LV T+ G+ + + + + GLS T N
Sbjct: 204 HYTFNLLVHTHCSKGT--------------------LADALSTLSTMQGFGLSPDAVTYN 243
Query: 201 ALIWEVSRGKGVI------------SGYEIYREVFGLDSDATAGIG--KDVKRVVRV--- 243
L+ R KG++ G R + A A +G K +VV
Sbjct: 244 TLLNAHCR-KGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTA 302
Query: 244 ---RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE-PDCYSYSVLMAVFCEERRMR 299
P++ T+N L G + G ++ + EM RLG PD +Y+ L + R
Sbjct: 303 NGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSS 362
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A +L EEMR+K V+ +V +N +I G C+ GE+ A +M G+ +T+ L+
Sbjct: 363 DALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLI 422
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV----- 414
+ +C+AG++ A + ++M R+G + + T+ ++ LC ++R EA +L++
Sbjct: 423 HAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFM 482
Query: 415 ---VKFG--------------------------LFPTEKSYMFLIKGLCEEGKMEEALKV 445
V +G L P+ +Y LIKGL G+++EA+
Sbjct: 483 PDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDK 542
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
E++ KG P Y+ I Y KEG++E A +M EN + +
Sbjct: 543 LNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPD 589
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 144/308 (46%), Gaps = 18/308 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++E + + + GL+ V T N LI + + Y + E+
Sbjct: 395 ELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM------------- 441
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
V+R +++ + T N ++ +E +E+ + + + G PD SY +MA + +E
Sbjct: 442 -VRRGLKL--DTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKE 498
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
A +LW+EM +K + + YNT+I G +G + A + E+ G+ T+
Sbjct: 499 YNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTY 558
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++ YC+ GD+++A +N M F+P+ T L+ LC ++ +AL + ++ V
Sbjct: 559 NIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVE 618
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K G +Y LI+ +C++G ++ AL A+M +G +P Y+ + + G E
Sbjct: 619 K-GKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTE 677
Query: 476 MA-TMLRK 482
A ML K
Sbjct: 678 EAQNMLHK 685
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 159/361 (44%), Gaps = 41/361 (11%)
Query: 155 GSAPFV--FDLLIKCCLEVKNIEKIETCVD-IVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
G AP V ++ LI + NI K T +D +VR RGL + T N +++ + + K
Sbjct: 410 GLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVR----RGLKLDTFTLNTVLYNLCKEKR 465
Query: 212 VISGYEIYREVFGL-DSDATAGIGKD----------------VKRVVRV---------RP 245
Y E GL S G D + +R+ P
Sbjct: 466 -------YEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTP 518
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ T+N L+ G R G ++ D E+ G PD +Y++++ +C+E + A +
Sbjct: 519 SISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFH 578
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M + + + DVV NT++ G C G++ +A + F G + +T+ L+ C+
Sbjct: 579 NKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKD 638
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
GDVD+A+ + DM +G +P+ T V++ L + R EA ++L ++ + G S
Sbjct: 639 GDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLH-KLAESGTLSQSFS 697
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
L +E + + K + E V + + E Y+ ++G G + A + EM
Sbjct: 698 SPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMM 757
Query: 486 E 486
+
Sbjct: 758 Q 758
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/302 (17%), Positives = 120/302 (39%), Gaps = 56/302 (18%)
Query: 136 ENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
++P L+L++ +++ ++ + ++ LIK + + +++ +D + LM +GL
Sbjct: 500 NSEPALRLWDEMIE--KKLTPSISTYNTLIKG---LSRMGRLKEAIDKLNELMEKGLVPD 554
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
+T N +I + + + ++ + ++ +P+V T N LM
Sbjct: 555 DTTYNIIIHAYCKEGDLENAFQFHNKMVE----------------NSFKPDVVTCNTLMN 598
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G G +K ++ G + D +Y+ L+ C++ + A + +M + ++
Sbjct: 599 GLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQP 658
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV--------------------------- 348
D YN ++ E G A+ ++ SG
Sbjct: 659 DAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTE 718
Query: 349 --------ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
+S+S + LVNG C +G A + ++M +KG + ST L+ L +
Sbjct: 719 EETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKR 778
Query: 401 RR 402
++
Sbjct: 779 QK 780
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 123/244 (50%), Gaps = 1/244 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V + PNV TFN ++ + G + V+ +M CEPD Y+Y LM C+ R+ E
Sbjct: 193 VSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDE 252
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L +EM+ V +N +I G C+ G+++RA + M L G + VT+ L++
Sbjct: 253 AVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIH 312
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C G ++ AI + + M P T +I L + R + +L A + + G
Sbjct: 313 GLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVL-ALMEERGYC 371
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
E Y LI GL +EGK +EA+ + EM KG+E + +YSA IDG ++G + A +
Sbjct: 372 VNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEV 431
Query: 481 RKEM 484
EM
Sbjct: 432 LSEM 435
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 118/241 (48%), Gaps = 1/241 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N L+ G +G EK + M C P+ +Y ++ ++ R + +
Sbjct: 302 PNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACV 361
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M ++ + Y+T+I G + G+ A F+EM + G E +++ + +++G CR
Sbjct: 362 LALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCR 421
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G D A+ V ++M KG P T L+ + A+++ K + K E
Sbjct: 422 DGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWK-DMAKHNFTQNEV 480
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI GLC++GK++EA+ V +M+GKG +P + YS+ I+G G VE A L EM
Sbjct: 481 CYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEM 540
Query: 485 F 485
Sbjct: 541 L 541
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 122/264 (46%), Gaps = 32/264 (12%)
Query: 212 VISGYEIYREVFGLDSDATAGIGK--DVKRVVR------VRPNVHTFNALMVGFYREGAF 263
+ GYE+ V+ D GK D V+ PN +T ++LM GF+ G
Sbjct: 401 TVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNS 460
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
+ +VW +MA+ + YSVL+ C++ +++EA +W +M K + DVVAY+++
Sbjct: 461 HRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSM 520
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSS--VTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
I G G + A + + EM G +S VT+ L+N C+ + AI + N M +
Sbjct: 521 INGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDR 580
Query: 382 GFEPEGSTIEV---------------------LIGELCDKRRVFEALDILKARVVKFGLF 420
G +P+ T + L+ L ++RV A I++ + K L
Sbjct: 581 GCDPDLVTCTIFLRMLREKLDPPQDGREFLDELVVRLLKRQRVLGASKIVEVMLQKL-LP 639
Query: 421 PTEKSYMFLIKGLCEEGKMEEALK 444
P ++ +++ LC+ K++ ++
Sbjct: 640 PKHSTWARVVENLCKPKKVQAVIQ 663
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N + ++ L+ G ++EG ++ ++ EM G E + YS ++ C + + +A ++
Sbjct: 373 NEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVL 432
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM +K + ++++ GF E G RA E +++M + V + L++G C+
Sbjct: 433 SEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKD 492
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF-GLFPTEK 424
G V A++V+ M KG +P+ +I L V +A+ + + + P
Sbjct: 493 GKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVV 552
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+Y L+ LC++ + A+ + M+ +G +P L + F+
Sbjct: 553 TYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFL 593
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 160/344 (46%), Gaps = 15/344 (4%)
Query: 135 PENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSV 194
P+ ++L+ + G+ P + ++ D++ L S GL +
Sbjct: 82 PDMRRLMRLYATAATAFVARGNLPMAHEAARAMVAAFAEAGRLREAADMLLELRSHGLPL 141
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALM 254
V T N W + G + RE F D A A G VRP+ +F AL+
Sbjct: 142 VVETAN---WVLRVGLRHPGCFAHAREAF--DGMARAAGG--------VRPDHRSFRALV 188
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
+G REG FE+ + + M G D + +V++ FC + R R L+ M +
Sbjct: 189 LGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTP 248
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
++V Y+ I G CE G + +A EM G++ + T L++G C+ G ++ A +
Sbjct: 249 PNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRL 308
Query: 375 YNDMCR-KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ + + ++P T V+IG C + ++ A ++L R+V+ GL P +Y LI G
Sbjct: 309 FLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARA-EMLLGRMVEQGLAPNTNTYTTLIHGH 367
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
C+ G + A ++ +M +GF P++ Y+A I G+ K+G ++ A
Sbjct: 368 CKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEA 411
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 121/246 (49%), Gaps = 1/246 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNVHT+ ++ G+ +EG + E + M G P+ +Y+ L+ C+ A +
Sbjct: 319 KPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFE 378
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +M+ + ++ YN IIGGFC+ G++ A + R G+ VT+ L+ +C
Sbjct: 379 LMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHC 438
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G + A+ ++ M K P+ T +I C +R++ ++ + + + GL PT+
Sbjct: 439 KQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFD-KCLSIGLVPTK 497
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++Y +I G C GK+ ALKV MV G P Y A I KE +E A L +
Sbjct: 498 QTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFET 557
Query: 484 MFENQV 489
M + +
Sbjct: 558 MLDKHL 563
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 144/307 (46%), Gaps = 22/307 (7%)
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
L++ CC E + E ++ + ++G + +TC ++ R + +++R +
Sbjct: 187 LVLGCCRE----GRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRM 242
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+ + PN+ ++A + G G ++ V EM G +P+
Sbjct: 243 SEMGTP----------------PNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNV 286
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
Y+++ L+ C+ M A +L+ ++ + + + +V Y +IGG+C+ G++ARAE
Sbjct: 287 YTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLG 346
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
M G+ ++ T+ L++G+C+ G D A + N M +GF P T +IG C K
Sbjct: 347 RMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKG 406
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
++ EA +L+ + GL + +Y LI C++G + AL + +M K P + Y
Sbjct: 407 KIQEAYKVLRMATSQ-GLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTY 465
Query: 462 SAFIDGY 468
+ I Y
Sbjct: 466 TTIIAMY 472
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 118/244 (48%), Gaps = 4/244 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN++T+NA++ GF ++G ++ V G D +Y++L+ C++ + A L
Sbjct: 390 PNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDL 449
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++M +K+ D+ Y TII +C+ +M ++++ F + G+ + T+ ++ GYCR
Sbjct: 450 FKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCR 509
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + SA+ V+ M + G P+ T LI LC + R+ EA + + + K L P +
Sbjct: 510 LGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKH-LVPCDV 568
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ + L C K+ A+ + + A + GN++ A++ K +
Sbjct: 569 TRVTLAYEYCRRDKITIAVSFLDRLDKR---QQAHTADALVRKLSTVGNLDAASLFLKNV 625
Query: 485 FENQ 488
+
Sbjct: 626 LDKH 629
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 99/238 (41%), Gaps = 39/238 (16%)
Query: 253 LMVGFYREGAFEKVEDVWVEMARL--GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
L VG G F + + MAR G PD S+ L+ C E R EA+ L M
Sbjct: 150 LRVGLRHPGCFAHAREAFDGMARAAGGVRPDHRSFRALVLGCCREGRFEEADALLAAMWA 209
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
+ GFC ++S++ T +V +CR G +
Sbjct: 210 Q--------------GFC-------------------LDSATCTV--VVRAFCRQGRFRN 234
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
++ M G P I LC++ V +A +L+ V K GL P ++ LI
Sbjct: 235 VTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGK-GLKPNVYTHTSLI 293
Query: 431 KGLCEEGKMEEALKVQAEMV-GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
GLC+ G ME A ++ ++V ++P++ Y+ I GY KEG + A ML M E
Sbjct: 294 DGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQ 351
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 119/311 (38%), Gaps = 49/311 (15%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLE--VKNIE-------------KIETCVDI 183
P + L+ + + GS F+L+ K LE + NI KI+ +
Sbjct: 355 PNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKV 414
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRV 243
+RM S+GL + T LI E + + ++++++ A D+ +
Sbjct: 415 LRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQM------AEKSCHPDIHTYTTI 468
Query: 244 -------------------------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
P T+ +++ G+ R G V+ M + GC
Sbjct: 469 IAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGC 528
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
PD +Y L++ C+E R+ EA L+E M DK++ V T+ +C ++ A
Sbjct: 529 LPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVS 588
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F + + T + LV G++D+A L ++ K + + +T I
Sbjct: 589 FLDRL---DKRQQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCY 645
Query: 399 DKRRVFEALDI 409
+ R A +I
Sbjct: 646 ESNRYALASEI 656
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 73/194 (37%), Gaps = 39/194 (20%)
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIG-GFCEIGEMARAEEFFREMGLS--GVES 350
E R+REA + E+R + V N ++ G G A A E F M + GV
Sbjct: 120 EAGRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRP 179
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+F LV G CR G + A + M +GF + +T V++
Sbjct: 180 DHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVV---------------- 223
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ C +G+ + M G P++ YSA+IDG +
Sbjct: 224 --------------------RAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCE 263
Query: 471 EGNVEMATMLRKEM 484
G V+ A + +EM
Sbjct: 264 RGYVKQAFHVLEEM 277
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 132/251 (52%), Gaps = 7/251 (2%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
+ + V P+V ++ +L+ GF R G ++ + ++ EM +G +PD ++SVL+ + C+E ++
Sbjct: 510 KALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKV 569
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EA +L E M + + V Y T++ G C ++ A + F +M G VT+ L
Sbjct: 570 IEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTL 629
Query: 359 VNGYCRAGDVDSAILVYNDMCRK------GFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
+ G C+ G++ +A+ ++ M F+P+ + ++I LC R EA ++ K
Sbjct: 630 MKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFK- 688
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ G+ P SY LI G C GK+E+A + EMV +G + + YS I G+ KEG
Sbjct: 689 EMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEG 748
Query: 473 NVEMATMLRKE 483
++ A + E
Sbjct: 749 QIDKALFQKME 759
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 127/251 (50%), Gaps = 7/251 (2%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ T++ L+ G + + +++ M +LGC PD +Y LM C+ ++ A L
Sbjct: 44 DIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLH 103
Query: 306 EEMRDKNVEHDV------VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+EM + ++ + V+Y+ II G C+ A E F+EM G+ +++ L+
Sbjct: 104 QEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLI 163
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+G+CR+G + A ++N+M G + +T +LI LC + +V EA ++L+ +++ G
Sbjct: 164 HGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEV-MIQRGC 222
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
+Y LIKGLC + ++ EA ++ M G P Y + G + GN+ A
Sbjct: 223 ILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQ 282
Query: 480 LRKEMFENQVR 490
L +EM + R
Sbjct: 283 LHQEMLNDTGR 293
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 205/452 (45%), Gaps = 66/452 (14%)
Query: 68 GLTPTQFSQIALGLKNNPHLALRFFSFT-QHKSLCKHSLSSYATIIHILSRARLIGPARD 126
GL T IAL HL + T Q+ CK +L SY+ II L + R AR+
Sbjct: 89 GLCQTGKINIAL------HLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARE 142
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECG----------------------SAPFVFDLL 164
+ + +++ P + + L+ + G ++ + D+L
Sbjct: 143 LFK-EMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDIL 201
Query: 165 IKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG 224
C E K IE E ++ +++ RG + + T + LI KG+ + I
Sbjct: 202 ---CKEGKVIEANE----LLEVMIQRGCILDIVTYSTLI------KGLCMKHRI------ 242
Query: 225 LDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLG--C 278
S+AT K + RP+ + LM G + G A + +++ + R G C
Sbjct: 243 --SEATRLFMSMQK--LGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC 298
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+P SYS+++ C++RR EA +L++EM+ + + DV++Y T+I GFC G+ +A+
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F EM G++ T L++ C+ G V A + + ++G P+ T L+ LC
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLC 418
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV------GK 452
K R+ +A + ++ K G P + L+KGLC+ G ++ AL++ M+ G
Sbjct: 419 MKHRISKATQLF-LKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGI 477
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+P+ YS IDG K G + A L KEM
Sbjct: 478 NCKPNAISYSIIIDGLCKCGREDEARELFKEM 509
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 166/357 (46%), Gaps = 26/357 (7%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNI---EKIETCVDIVRMLMSRGLSVKVST 198
KL EV+++ G P V + C VK + +I + + G V T
Sbjct: 393 KLLEVVIQR----GCIPDV----VTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVT 444
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
C L+ + + + E+++ + SD T+ G + +PN +++ ++ G
Sbjct: 445 CATLMKGLCQSGNIKIALELHKNML---SD-TSPYG------INCKPNAISYSIIIDGLC 494
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ G ++ +++ EM LG PD SY+ L+ FC + ++A+ L+ EM D V+ DV
Sbjct: 495 KCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVT 554
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
++ +I C+ G++ A E M G ++VT+ LV G C + A ++ M
Sbjct: 555 TFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKM 614
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF-----PTEKSYMFLIKGL 433
+ G P+ T L+ LC + AL++ K + G + P SY +I GL
Sbjct: 615 QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGL 674
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
C+ G+ +EA ++ EM G P++ Y++ I G+ + G +E A L EM + V+
Sbjct: 675 CKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQ 731
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMAR------LGCEPDCYSYSVLMAVFCEERR 297
RP+ + LM G + G + EM + C+P SYS+++ C++RR
Sbjct: 77 RPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRR 136
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
EA +L++EM+ + + DV++Y ++I GFC G+ +A+ F EM G+ S T
Sbjct: 137 EDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSM 196
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL------- 410
L++ C+ G V A + M ++G + T LI LC K R+ EA +
Sbjct: 197 LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLG 256
Query: 411 -KARVVKFGLF--------------------------------PTEKSYMFLIKGLCEEG 437
+ + +G PT SY +I GLC++
Sbjct: 257 CRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR 316
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ +EA ++ EM +G P + Y+ I G+ G E A L EM + ++ +
Sbjct: 317 REDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 371
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 7/220 (3%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M +G +PD + VL+ +FC+E ++ EA +L E M + D+V Y+T+I G C
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY----NDMCRKGF--EPE 386
++ A + F M G ++ + L+ G C+ G ++ A+ ++ ND + G +P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
+ ++I LC RR EA ++ K + G+ P SY LI G C GK E+A +
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQ-GMMPDVISYTSLIHGFCRSGKWEKAKCLF 179
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
EM+ G + S ID KEG V A L + M +
Sbjct: 180 NEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQ 219
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 153/332 (46%), Gaps = 20/332 (6%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF---------- 223
I + +DIV ++ +G V T N+LI + + EI +++
Sbjct: 276 IGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVT 335
Query: 224 ------GLDSDATAGIGKDVKRVVRVR---PNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
L + D+ R++ + P+V TFN L+ G + +++ EM
Sbjct: 336 YNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMK 395
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
GC+PD ++YS+L+ C ERR++EA L +EM + V YNT+I G C+ +
Sbjct: 396 NKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIE 455
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
AEE F +M L GV SSVT+ L++G C+ V+ A + + M +G +P+ T L+
Sbjct: 456 DAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLL 515
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
C + +A DI++ + G P +Y LI GLC G+++ A K+ + KG
Sbjct: 516 TYFCRVGDIEKAGDIVQT-MASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGI 574
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ Y+ I + L +EM E
Sbjct: 575 VLTPHAYNPVIQALFMRKRTKEGMRLFREMME 606
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 196/493 (39%), Gaps = 94/493 (19%)
Query: 14 SKPKPKPQLLS-----------QFSTSSS-------TPPSDQSHNLIATVVSLLTHHRSK 55
S P P P+ L+ FS++S+ T PS +H+ + +LL
Sbjct: 9 SLPHPFPRTLNPHPHSTPTPPLSFSSNSTFKFPTLCTTPSSTTHHPLPPNETLLLQLTQS 68
Query: 56 SRWNHLLSLCR----SGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATI 111
S ++ + +L + SG P N A SFT + +
Sbjct: 69 SSFDSITTLLKQLKSSGSIP-----------NATTFATLIQSFTNFHEI--------ENL 109
Query: 112 IHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEV 171
+ IL P + +AL + D KLKL E+L
Sbjct: 110 LKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSK--------------------- 148
Query: 172 KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA 231
+++ G+ + VST N LI K + +++ + L+ A
Sbjct: 149 ---------------MVNEGIVLDVSTFNVLI------KALCKAHQLRPAILMLEEMANH 187
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
G+ +P+ TF LM GF EG + +M GC S VL+
Sbjct: 188 GL----------KPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
FC+E R+ EA + E+ ++ D V +N+++ GFC IG + A + M G +
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
T+ L++G C+ G+ + AI + M + P T LI LC + + A D+ +
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR 357
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
V K GL P ++ LI+GLC + A+++ EM KG +P YS ID E
Sbjct: 358 ILVSK-GLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYE 416
Query: 472 GNVEMATMLRKEM 484
++ A ML KEM
Sbjct: 417 RRLKEALMLLKEM 429
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 121/243 (49%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V+T+N+L+ G + G FEK ++ +M C P+ +Y+ L++ C+E + A L
Sbjct: 296 PDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDL 355
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ K + DV +NT+I G C A E F EM G + T+ L++ C
Sbjct: 356 ARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCY 415
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ A+++ +M G LI LC RR+ +A +I ++ G+ +
Sbjct: 416 ERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFD-QMELLGVSRSSV 474
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI GLC+ ++EEA ++ +M+ +G +P Y++ + + + G++E A + + M
Sbjct: 475 TYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTM 534
Query: 485 FEN 487
N
Sbjct: 535 ASN 537
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 158/353 (44%), Gaps = 32/353 (9%)
Query: 142 KLFEVLVK-TYRECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC 199
K E+L + REC ++ LI C E +IE D+ R+L+S+GL V T
Sbjct: 316 KAIEILQQMILRECSPNTVTYNTLISALCKE----NEIEAATDLARILVSKGLLPDVCTF 371
Query: 200 NALIWEVSRGKGVISGYEIYREVF--GLDSDA-TAGIGKD-------VKRVVRVRP---- 245
N LI + K E++ E+ G D T I D +K + +
Sbjct: 372 NTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMES 431
Query: 246 -----NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
N +N L+ G + E E+++ +M LG +Y+ L+ C+ +R+ E
Sbjct: 432 SGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEE 491
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +L ++M + ++ D YN+++ FC +G++ +A + + M +G E T+ L+
Sbjct: 492 ASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIG 551
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G CRAG VD A + + KG +I L ++R E + + + + K
Sbjct: 552 GLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDP- 610
Query: 421 PTEKSYMFLIKGLCE-EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
P ++ + +GLC G ++EA+ EM+ KG P + G++ EG
Sbjct: 611 PDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSF-----GFLAEG 658
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 134/342 (39%), Gaps = 47/342 (13%)
Query: 64 LCRSGLTPT--QFSQIALGL--KNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRAR 119
L GL P F+ + GL N +A+ F ++K CK +Y+ +I L R
Sbjct: 359 LVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG-CKPDEFTYSILIDSLCYER 417
Query: 120 LIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSA--PFVFDLLIKCCLEVKNIEKI 177
+LK +L+K G A V++ LI + + IE
Sbjct: 418 --------------------RLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDA 457
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
E D + +L G+S T N LI + + K V ++ +D G+
Sbjct: 458 EEIFDQMELL---GVSRSSVTYNTLIDGLCKNKRVEEASQL------MDQMIMEGL---- 504
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
+P+ T+N+L+ F R G EK D+ MA GCEPD ++Y L+ C R
Sbjct: 505 ------KPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGR 558
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A KL ++ K + AYN +I FREM ++T +
Sbjct: 559 VDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKI 618
Query: 358 LVNGYCR-AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
+ G C G + AI +M KG PE + L LC
Sbjct: 619 VFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLC 660
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 146/272 (53%), Gaps = 17/272 (6%)
Query: 200 NALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYR 259
N +I +S+ K V +++Y E+ + K R+ P+V T++AL+ GF+
Sbjct: 212 NTVIDGMSKDKHVNDAFDLYSEM----------VAK------RISPDVVTYSALIRGFFI 255
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G + D++ +M +PD Y++++L+ FC+E R+++A+ + + M ++++ +V
Sbjct: 256 VGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVST 315
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+NT++ GFC+ +M + F M G++ + VT+ L++GYC V+ A ++N M
Sbjct: 316 FNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMS 375
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
++G + ++I C ++V +A+ + K + P +Y LI GLC+ GK+
Sbjct: 376 QRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHK-HIIPDVVTYNSLIDGLCKSGKI 434
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
A ++ EM +G P++ Y++ ++ + +
Sbjct: 435 SYAFQLVNEMHDRGQPPNIITYNSILNALLTK 466
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 117/217 (53%), Gaps = 13/217 (5%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ + ++PNV TFN L+ GF ++ ++ + V+ M + G +P+ +Y LM +C
Sbjct: 302 DMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 361
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+++ +A+K++ M + V +V +YN +I GFC+I ++ +A + F EM + VT+
Sbjct: 362 KQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTY 421
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C++G + A + N+M +G P T ++ L K LK +
Sbjct: 422 NSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTK---------LKDQ-- 470
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
G+ P + LIKGLC+ GK+E A KV +++ K
Sbjct: 471 --GIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 127/252 (50%), Gaps = 6/252 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN TFN L+ F + G V ++ ++G EPD + + + FC + ++ +A
Sbjct: 99 INPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQAL 158
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ D V+Y T+I G C++GE A + R + V+ ++V + +++G
Sbjct: 159 NFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGM 218
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ V+ A +Y++M K P+ T LI ++ +A+D+ +++ + P
Sbjct: 219 SKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILE-NIKPD 277
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY-----MKEGNVEMA 477
++ L+ G C+EG++++A V M+ + +P++ ++ +DG+ MKEG A
Sbjct: 278 VYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFA 337
Query: 478 TMLRKEMFENQV 489
M+++ + N V
Sbjct: 338 MMMKQGIKPNVV 349
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 1/224 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T N + GF +G + + ++ LG D SY L+ C+ R A +L
Sbjct: 136 PDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQL 195
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ K V+ + V YNT+I G + + A + + EM + VT+ L+ G+
Sbjct: 196 LRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFI 255
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + AI ++N M + +P+ T +L+ C + R+ +A ++L +++ + P
Sbjct: 256 VGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQ-DIKPNVS 314
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
++ L+ G C++ KM+E V A M+ +G +P++ Y + +DGY
Sbjct: 315 TFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 358
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 110/228 (48%), Gaps = 1/228 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
FN ++ + + V + +M G P+ ++++L+ FC+ + A + ++
Sbjct: 71 FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
E D++ NT I GFC G++ +A F ++ G V++ L+NG C+ G+
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+A+ + + K + +I + + V +A D+ V K + P +Y L
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAK-RISPDVVTYSAL 249
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
I+G GK+++A+ + +M+ + +P + ++ +DG+ KEG ++ A
Sbjct: 250 IRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKA 297
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 1/192 (0%)
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L+ + +N +N I+G + ++M G+ + VTF L+N
Sbjct: 52 AVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILIN 111
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
+C+ G + A V + + G+EP+ T+ I C K ++ +AL+ ++V G
Sbjct: 112 CFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALN-FHDKLVALGFH 170
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+ SY LI GLC+ G+ AL++ + GK + + +Y+ IDG K+ +V A L
Sbjct: 171 LDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDL 230
Query: 481 RKEMFENQVRQE 492
EM ++ +
Sbjct: 231 YSEMVAKRISPD 242
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 94/213 (44%), Gaps = 7/213 (3%)
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+ ++ ++ + + L ++M + + + V +N +I FC++G + A +
Sbjct: 69 FEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAK 128
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
+ G E +T + G+C G + A+ ++ + GF + + LI LC
Sbjct: 129 ILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGE 188
Query: 403 VFEALDILK---ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
AL +L+ ++V+ Y +I G+ ++ + +A + +EMV K P +
Sbjct: 189 TRAALQLLRRVDGKLVQL----NAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVV 244
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
YSA I G+ G ++ A L +M ++ +
Sbjct: 245 TYSALIRGFFIVGKLKDAIDLFNKMILENIKPD 277
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 173/372 (46%), Gaps = 58/372 (15%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDA--- 229
+IE + +V ++ G+ V +I + + V + ++ ++ +G+ D
Sbjct: 155 NRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMY 214
Query: 230 --------TAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
+G +D ++R ++P+V TFNAL+ F +EG ++++ EM +
Sbjct: 215 TSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQ 274
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
+ P+ ++Y+ L+ C E R+ EA +++ M K DVVAY ++I GFC+ ++
Sbjct: 275 MSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVED 334
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A + F EM G+ +++T+ L+ G+ G + A V+ M +G P T VL+
Sbjct: 335 AMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLH 394
Query: 396 ELCDKRRVFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV-- 450
LC +V +AL I ++ R + G+ P ++Y L+ GLC GK+E+AL V +M
Sbjct: 395 CLCYNGKVNKALMIFEDMQKREID-GVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKR 453
Query: 451 ---------------------------------GKGFEPSLEIYSAFIDGYMKEGNVEMA 477
KG +P++ Y+ I G +EG + A
Sbjct: 454 DMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEA 513
Query: 478 TMLRKEMFENQV 489
+L ++M E+ V
Sbjct: 514 HVLFRKMKEDGV 525
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 184/411 (44%), Gaps = 37/411 (9%)
Query: 87 LALRFFSFTQHKSLCKHSLS---SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL 143
+A+RF H+ L K + S++ ++ + R R+++R L S + + L L
Sbjct: 1 MAMRFLHL--HRDLVKGNSGKALSFSRLLGLSFWVRAFCNYREILRNGLHSLQFNEALDL 58
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
F +V E P + D + + ++K + +++ + L G+S + TCN L+
Sbjct: 59 FSHMV----ESRPLPSIIDF-TRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLM 113
Query: 204 WEVSRGKGVISGYEIYREVFGLDSD---ATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
F S A++ +GK +K + P++ TF +L+ GF
Sbjct: 114 -----------------NCFCQSSQPCLASSFLGKLMK--LGFEPDIFTFTSLINGFCLG 154
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
E+ + +M +G +PD Y+ ++ C+ + A L+ +M + + DVV Y
Sbjct: 155 NRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMY 214
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
+++ G C G A+ R M ++ +TF L++ + + G + A +YN+M +
Sbjct: 215 TSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQ 274
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
P T LI LC + R+ EA + K G FP +Y LI G C+ K+E
Sbjct: 275 MSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETK-GCFPDVVAYTSLINGFCKCKKVE 333
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
+A+K+ EM KG + Y+ I G+ G +A +E+F + V +
Sbjct: 334 DAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVA----QEVFGHMVSR 380
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 11/177 (6%)
Query: 326 GFCEIGEMAR----------AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
FC E+ R A + F M S S + F L+N + D I +
Sbjct: 35 AFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLC 94
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
+ G + T +L+ C + A L +++K G P ++ LI G C
Sbjct: 95 KHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFL-GKLMKLGFEPDIFTFTSLINGFCL 153
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
++EEA+ + +MV G +P + IY+ ID K G+V+ A L +M +R +
Sbjct: 154 GNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPD 210
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 117/248 (47%), Gaps = 1/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P HT ++ G +E ++V+M GCEP+ Y+Y+ L++ C ++ A
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAI 375
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ M V + V YN +I E + A MG +G + VT+ ++ GY
Sbjct: 376 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY 435
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C GD A+LV N+M ++G T +I CD AL IL + G P
Sbjct: 436 CILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL-MRDGGCKPD 494
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E SY LI G C+ KME A + EMV G P+ Y+A IDGY K+ ++ AT L +
Sbjct: 495 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 554
Query: 483 EMFENQVR 490
M + R
Sbjct: 555 HMKRSGCR 562
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+N ++ G+ G +K V M + G + +Y+ ++ +C+ A ++
Sbjct: 423 PNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI 482
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ MRD + D +Y +I GFC+I +M A F EM G+ + VT+ L++GYC+
Sbjct: 483 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 542
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+D+A + M R G P T VLI L K+ F + L +++ G+FP
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL-TKQNNFSGAEELCKVMIEEGIFPNVV 601
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I GLC+ G AL++ +M+ +G P+L YS+ I +EG VE A L E+
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 1/245 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV+T+ AL+ G G + ++ M+R G P+ +Y+ L+ + E RR++ A +
Sbjct: 353 PNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M ++V YN +I G+C +G+ +A M G ++ VT+ ++ GYC
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G+ SA+ + + M G +P+ + LI C ++ A + +V GL P E
Sbjct: 473 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFN-EMVDDGLCPNEV 531
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C++ K++ A + M G P+++ Y+ I G K+ N A L K M
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 485 FENQV 489
E +
Sbjct: 592 IEEGI 596
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 6/212 (2%)
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
++YS L+ + M + V+ +++ YN +I C+ G +A AE ++
Sbjct: 181 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 240
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
+ S + + T+ ++ G+CR D+DSA+ V+N M ++G EP T LI LCD R
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 300
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
V EA D+++ ++ G+ PT + I LC+ G E+A ++ +M KG EP++ Y+
Sbjct: 301 VNEAFDLIREMILH-GILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 359
Query: 463 AFIDGYMKEGNVEMAT-----MLRKEMFENQV 489
A I G G +++A M R +F N V
Sbjct: 360 ALISGLCVSGILKVAIGLFHRMSRDGVFPNTV 391
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 21/291 (7%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK--DVKRV 240
++ ++ RG S + T N +I GY DS T + D+ R
Sbjct: 447 VMNNMLQRGHSANLVTYNT----------IIKGY--------CDSGNTTSALRILDLMRD 488
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+P+ ++ L+ GF + E ++ EM G P+ +Y+ L+ +C++ ++
Sbjct: 489 GGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDT 548
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L E M+ +V YN +I G + + AEE + M G+ + VT+ +++
Sbjct: 549 ATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMID 608
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ G A+ ++N M +G P T LI L + +V EA ++ A + + GL
Sbjct: 609 GLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF-AELERHGLI 667
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
P E +Y+ +I+ GK+E A M+ G +P+L Y I G E
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 24/325 (7%)
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
LIK C + + + + +D ML GL + + +AL+ +SR
Sbjct: 151 LIKSCHSKEAMARTMSFLD---MLSQSGLRMGLFAYSALLIHLSR--------------L 193
Query: 224 GLDSDATAGIGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
G+ TA + R++ V+PN+ +NA++ ++G E + ++ PD
Sbjct: 194 GM----TAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPD 249
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
++Y+ ++ C + + A +++ +M + E + V Y+T+I G C+ G + A + R
Sbjct: 250 TFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIR 309
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM L G+ ++ T + C G + A ++ DM KG EP T LI LC
Sbjct: 310 EMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG 369
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ A+ + R+ + G+FP +Y LI L E +++ A V M G P++ Y
Sbjct: 370 ILKVAIGLFH-RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTY 428
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFE 486
+ I GY G+ + A ++ M +
Sbjct: 429 NEMIKGYCILGDPKKAMLVMNNMLQ 453
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 1/245 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+R + ++AL++ R G V D + M G +P+ Y+ ++ C++ + +AE
Sbjct: 176 LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAE 235
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +++ + + D Y ++I G C ++ A + F +M G E ++VT+ L+NG
Sbjct: 236 TIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 295
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +G V+ A + +M G P T I LCD +E L + G P
Sbjct: 296 CDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG-CYEDAWRLFVDMKNKGCEPN 354
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI GLC G ++ A+ + M G P+ Y+A I+ ++ ++ A ++
Sbjct: 355 VYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLN 414
Query: 483 EMFEN 487
M N
Sbjct: 415 LMGRN 419
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 118/264 (44%), Gaps = 23/264 (8%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPNV T+N L+ G ++ F E++ M G P+ +Y+ ++ C+ A +
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ +M ++ +++ Y+++I + G++ AE F E+ G+ +T+ ++ Y
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL------CDKRRVF------------- 404
+G V+ A M + G +P T VLI L D+R
Sbjct: 682 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQ 741
Query: 405 ----EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+A+ ++ A++ + + + L+ L G+ EA ++ M+ +G P E
Sbjct: 742 TTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEA 801
Query: 461 YSAFIDGYMKEGNVEMATMLRKEM 484
Y++ + ++ NV++A + K M
Sbjct: 802 YNSLLCSLLRVRNVDLAMGVFKHM 825
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 143/357 (40%), Gaps = 76/357 (21%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
EK++T ++ + G V T N LI +++ + SG E +V +
Sbjct: 544 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK-QNNFSGAEELCKVMIEEG------- 595
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+ PNV T+ A++ G + G+ +++ +M GC P+ +YS L+ +
Sbjct: 596 --------IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E ++ EAE L+ E+ + D + Y +I + G++ A F M +G + + T
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707
Query: 355 FEHLVNG----YCRAGDVDSAILVYNDMCRKGFEPE-----------------GSTIEV- 392
+ L+ G Y A +A+ C G++ G +++V
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 393 --LIGELCDKRRVFEALDILKARVVKFGLFPTEKSY------------------MF---- 428
L+ L R FEA ++L + + + GL P +++Y +F
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQ-GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 826
Query: 429 -------------LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
LI LC+ + +EA M+ + + P + + IDG +++G
Sbjct: 827 TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 38/99 (38%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +N+L+ R + V+ M+ GCE Y L+ C+ R +EA
Sbjct: 797 PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARIT 856
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+E M + D V +I G G EF M
Sbjct: 857 FENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM 895
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 119/248 (47%), Gaps = 1/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P HT ++ G +E ++V+M GCEP+ Y+Y+ L++ C ++ A
Sbjct: 486 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 545
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ M V + V YN +I E + A MG +G+ ++ VT+ ++ GY
Sbjct: 546 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGY 605
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C GD A+LV N+M ++G T +I CD AL IL + G P
Sbjct: 606 CILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL-MRDGGCKPD 664
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E SY LI G C+ KME A + EMV G P+ Y+A IDGY K+ ++ AT L +
Sbjct: 665 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 724
Query: 483 EMFENQVR 490
M + R
Sbjct: 725 HMKRSGCR 732
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 1/239 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ T+N ++ G+ G +K V M + G + +Y+ ++ +C+ A ++
Sbjct: 594 NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 653
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ MRD + D +Y +I GFC+I +M A F EM G+ + VT+ L++GYC+
Sbjct: 654 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKD 713
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+D+A + M R G P T VLI L K+ F + L +++ G+FP +
Sbjct: 714 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL-TKQNNFSGAEELCKVMIEEGIFPNVVT 772
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y +I GLC+ G AL++ +M+ +G P+L YS+ I +EG VE A L E+
Sbjct: 773 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 831
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV+T+ AL+ G G + ++ M+R G P+ +Y+ L+ + E RR++ A +
Sbjct: 523 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 582
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M + ++V YN +I G+C +G+ +A M G ++ VT+ ++ GYC
Sbjct: 583 LNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 642
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G+ SA+ + + M G +P+ + LI C ++ A + +V GL P E
Sbjct: 643 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFN-EMVDDGLCPNEV 701
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C++ K++ A + M G P+++ Y+ I G K+ N A L K M
Sbjct: 702 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 761
Query: 485 FENQV 489
E +
Sbjct: 762 IEEGI 766
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 6/212 (2%)
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
++YS L+ + M + V+ +++ YN +I C+ G +A AE ++
Sbjct: 351 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 410
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
+ S + + T+ ++ G+CR D+DSA+ V+N M ++G EP T LI LCD R
Sbjct: 411 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 470
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
V EA D+++ ++ G+ PT + I LC+ G E+A ++ +M KG EP++ Y+
Sbjct: 471 VNEAFDLIREMILH-GILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 529
Query: 463 AFIDGYMKEGNVEMAT-----MLRKEMFENQV 489
A I G G +++A M R +F N V
Sbjct: 530 ALISGLCVSGLLKVAIGLFHRMSRDGVFPNTV 561
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 1/236 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ R +P+ ++ L+ GF + E ++ EM G P+ +Y+ L+ +C++
Sbjct: 654 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKD 713
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
++ A L E M+ +V YN +I G + + AEE + M G+ + VT+
Sbjct: 714 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTY 773
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++G C+ G A+ ++N M +G P T LI L + +V EA ++ A +
Sbjct: 774 TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF-AELE 832
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ GL P E +Y+ +I+ GK+E A M+ G +P+L Y I G E
Sbjct: 833 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 888
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 150/351 (42%), Gaps = 59/351 (16%)
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
LIK C + E + + + ML GL + + +AL+ +SR
Sbjct: 321 LIKSC---HSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSR--------------L 363
Query: 224 GLDSDATAGIGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
G+ TA + R++ V+PN+ +NA++ ++G E + ++ PD
Sbjct: 364 GM----TAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPD 419
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
++Y+ ++ C + + A +++ +M + E + V Y+T+I G C+ G + A + R
Sbjct: 420 TFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIR 479
Query: 342 EMGLSGV-----------------------------------ESSSVTFEHLVNGYCRAG 366
EM L G+ E + T+ L++G C +G
Sbjct: 480 EMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG 539
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
+ AI +++ M R G P T LI L + RR+ A +L + + GLF +Y
Sbjct: 540 LLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL-MGRNGLFTNIVTY 598
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+IKG C G ++A+ V M+ +G +L Y+ I GY GN A
Sbjct: 599 NEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 649
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 1/232 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ T+N ++ G+ G + M GC+PD +SY+ L+ FC+ +M A L+
Sbjct: 629 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 688
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM D + + V Y +I G+C+ ++ A M SG + T+ L++G +
Sbjct: 689 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 748
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+ A + M +G P T +I LC AL++ ++++ G P +
Sbjct: 749 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN-KMIEQGCLPNLLT 807
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
Y LI+ L +EGK+EEA + AE+ G P Y I+ Y+ G VE A
Sbjct: 808 YSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 859
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 6/252 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+R + ++AL++ R G V D + M G +P+ Y+ ++ C++ + +AE
Sbjct: 346 LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAE 405
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +++ + + D Y ++I G C ++ A + F +M G E ++VT+ L+NG
Sbjct: 406 TIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 465
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +G V+ A + +M G P T I LCD +E L + G P
Sbjct: 466 CDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG-CYEDAWRLFVDMKNKGCEPN 524
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA----- 477
+Y LI GLC G ++ A+ + M G P+ Y+A I+ ++ ++ A
Sbjct: 525 VYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLN 584
Query: 478 TMLRKEMFENQV 489
M R +F N V
Sbjct: 585 LMGRNGLFTNIV 596
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 118/264 (44%), Gaps = 23/264 (8%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPNV T+N L+ G ++ F E++ M G P+ +Y+ ++ C+ A +
Sbjct: 732 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 791
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ +M ++ +++ Y+++I + G++ AE F E+ G+ +T+ ++ Y
Sbjct: 792 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 851
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL------CDKRRVF------------- 404
+G V+ A M + G +P T VLI L D+R
Sbjct: 852 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQ 911
Query: 405 ----EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+A+ ++ A++ + + + L+ L G+ EA ++ M+ +G P E
Sbjct: 912 TTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEA 971
Query: 461 YSAFIDGYMKEGNVEMATMLRKEM 484
Y++ + ++ NV++A + K M
Sbjct: 972 YNSLLCSLLRVRNVDLAMGVFKHM 995
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 143/357 (40%), Gaps = 76/357 (21%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
EK++T ++ + G V T N LI +++ + SG E +V +
Sbjct: 714 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK-QNNFSGAEELCKVMIEEG------- 765
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+ PNV T+ A++ G + G+ +++ +M GC P+ +YS L+ +
Sbjct: 766 --------IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 817
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E ++ EAE L+ E+ + D + Y +I + G++ A F M +G + + T
Sbjct: 818 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 877
Query: 355 FEHLVNG----YCRAGDVDSAILVYNDMCRKGFEPE-----------------GSTIEV- 392
+ L+ G Y A +A+ C G++ G +++V
Sbjct: 878 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 937
Query: 393 --LIGELCDKRRVFEALDILKARVVKFGLFPTEKSY------------------MF---- 428
L+ L R FEA ++L + + + GL P +++Y +F
Sbjct: 938 NALVSNLSTAGRWFEANELLGSMISQ-GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 996
Query: 429 -------------LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
LI LC+ + +EA M+ + + P + + IDG +++G
Sbjct: 997 TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 1053
>gi|356564752|ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 544
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 206/460 (44%), Gaps = 44/460 (9%)
Query: 54 SKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIH 113
S S + L R LTP+ ++ NNP+L +FF FT+ + HS +Y ++
Sbjct: 58 SNSLDDRFLGYFREHLTPSHVLEVVKRF-NNPNLGFKFFRFTRERLSMSHSFWTYNMLLR 116
Query: 114 ILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKC-CLEVK 172
L +A L A+ ++ ++RS P +L LV ++ +LL + C V+
Sbjct: 117 SLCQAGLHNSAK-LLYDSMRSDGQLPDSRLLGFLVSSFALADRFDVSKELLAEAQCSGVQ 175
Query: 173 ----------NI----EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
NI +++ + + R LM + T N LI + V +E+
Sbjct: 176 VDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDVDEAFEL 235
Query: 219 YREV--FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
++ FG P++ T+N L+ G R ++ D+ E+ L
Sbjct: 236 LGDMGSFG------------------CSPDIVTYNILLHGLCRIDQVDRARDLLEEVC-L 276
Query: 277 GCE--PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
CE P+ SY+ +++ +C +M EA L+ EM + +V ++ ++ GF + G+MA
Sbjct: 277 KCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMA 336
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
A +++ G + +T L+NGYCRAG V+ + ++ +M + T VLI
Sbjct: 337 SALGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLI 396
Query: 395 GELCDKRRVFEALDILKARVVK-FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
LC R+ EA ++L R++K + P Y +I G C+ G ++EA + AEM K
Sbjct: 397 SALCKSNRLQEARNLL--RILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEMEEKC 454
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+P ++ I G+ +G A + +M + +D
Sbjct: 455 -KPDKLTFTILIIGHCMKGRTPEAIGIFYKMLASGCTPDD 493
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 173/374 (46%), Gaps = 41/374 (10%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+Y ++H L R + AR ++ + P +P + LF L+ Y G
Sbjct: 324 TYGVLMHGLCRMGKVDEARMLLN---KVP--NPNVVLFNTLINGYVSRGRLD-------- 370
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
E K + + ++S G + T N LI + + ++S E+ E+
Sbjct: 371 ---EAKAV--------MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM---- 415
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
++ PNV T+ L+ F +EG E+ +V EM+ G + Y+
Sbjct: 416 ------------QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYN 463
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L++ C++ ++++A ++ +M K + D+ +N++I G C++ + A +++M L
Sbjct: 464 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 523
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
GV ++++T+ L++ + R G + A+ + NDM +G + T LI LC + +
Sbjct: 524 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 583
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L + + + K GL P S LI GLC G ++ AL+ +M+ +G P + Y++ I+
Sbjct: 584 LALFEDMMSK-GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLIN 642
Query: 467 GYMKEGNVEMATML 480
G K G + A L
Sbjct: 643 GLCKTGRAQEALNL 656
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 143/305 (46%), Gaps = 18/305 (5%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALI-WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
VD RML+++ + V N LI VSRG+ D + +
Sbjct: 338 VDEARMLLNKVPNPNVVLFNTLINGYVSRGR----------------LDEAKAVMHESML 381
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V P++ T+N L++G ++G ++ EM GCEP+ +Y++L+ FC+E R+
Sbjct: 382 SVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLE 441
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
EA + +EM K + + V YN +I C+ ++ A F +M G + TF L+
Sbjct: 442 EARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLI 501
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
G C+ + A+ +Y DM +G T LI + + EAL ++ + + G
Sbjct: 502 FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR-GC 560
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
+ +Y LIK LC G +E+ L + +M+ KG P+ + I+G + GN++ A
Sbjct: 561 PLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALE 620
Query: 480 LRKEM 484
++M
Sbjct: 621 FLRDM 625
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 115/232 (49%), Gaps = 1/232 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P++ TFN+L+ G + FE+ ++ +M G + +Y+ L+ F M+EA K
Sbjct: 491 KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALK 550
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +M + D + YN +I C G + + F +M G+ ++++ L+NG C
Sbjct: 551 LVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLC 610
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G++ A+ DM +G P+ T LI LC R EAL++ V+ G+ P
Sbjct: 611 RTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE-GICPDA 669
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+Y LI C+EG ++A + + V GF P+ + + ++KEG+ E
Sbjct: 670 ITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 145/345 (42%), Gaps = 48/345 (13%)
Query: 182 DIVRMLMSR-GLSVKVSTCNALIWEVSRGKGVISGYEIYREVF------GLDSDATAGIG 234
D+ ML+ + G + + T +AL+ ++ + +G++ ++ + GL AT +
Sbjct: 112 DVYYMLIDKLGAAGEFKTIDALLMQMKQ-EGIVFRESLFILIMKHYGRAGLPGQATRLL- 169
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
D++ V P ++N ++ + V +V+ EM G P Y++ V+M C
Sbjct: 170 LDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCL 229
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTI------------------------------- 323
+ A L ++M + + Y T+
Sbjct: 230 VNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNT 289
Query: 324 ----IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
I G C++ + A + M L G +S T+ L++G CR G VD A ++ N
Sbjct: 290 FNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLN--- 346
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
K P LI + R+ EA ++ ++ G P +Y LI GLC++G +
Sbjct: 347 -KVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYL 405
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
A ++ EM KG EP++ Y+ ID + KEG +E A + EM
Sbjct: 406 VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM 450
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 166/344 (48%), Gaps = 25/344 (7%)
Query: 146 VLVKTYRECGSAPFVFDLLIKCCLEV-KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
++ K +ECG AP V + C + + I K+ +++ +M+ S G+ + T + LI
Sbjct: 455 IVFKRLKECGFAPSV--ITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLIN 512
Query: 205 EVSRGKGVISGYEIYREVF--GLDSD---------ATAGIGKDVKRVV---------RVR 244
+ K + + ++ +V GL D A G+G ++ R + R R
Sbjct: 513 GFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMG-NMDRAIHMVKEMQKERCR 571
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P TF ++ GF R G + +++ M R GC P ++++ L+ E+R+M +A ++
Sbjct: 572 PTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEI 631
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EM V D Y TI+ G+ +G+ +A E+F +M G++ T+E L+ C+
Sbjct: 632 LDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCK 691
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G + SA+ V +M + +LI + ++EA D+++ ++ + G+ P
Sbjct: 692 SGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQ-QMNQEGVQPDIH 750
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+Y I C+ G M A K EM G +P+++ Y+ I G+
Sbjct: 751 TYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGW 794
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 36/283 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ L+ + + G K +V M +G + + +YS+L+ F + + A +
Sbjct: 467 PSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAV 526
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E++ ++ DVV YN II FC +G M RA +EM +S TF +++G+ R
Sbjct: 527 FEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFAR 586
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG++ A+ +++ M R G P T L+ L +KR++ +A++IL + G+ P E
Sbjct: 587 AGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALA-GVSPDEH 645
Query: 425 SYMF-----------------------------------LIKGLCEEGKMEEALKVQAEM 449
+Y L+K C+ G+M+ AL V EM
Sbjct: 646 TYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREM 705
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ + +Y+ IDG+ + G++ A L ++M + V+ +
Sbjct: 706 NAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPD 748
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 119/283 (42%), Gaps = 38/283 (13%)
Query: 244 RPNVHTFNALMVGFY-REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+P+ F LMVG+Y R G + + M G +P + Y+ L+ + R M EA
Sbjct: 291 KPSRREF-GLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEAL 349
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIG------------------------------- 331
+M ++ +E +V Y+ ++GGF + G
Sbjct: 350 SCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAY 409
Query: 332 ----EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
M RAE REM G+++ + +++GY + + ++V+ + GF P
Sbjct: 410 CQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSV 469
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI +V +AL++ K + G+ K+Y LI G + A V
Sbjct: 470 ITYGCLINMYTKIGKVSKALEVSKM-MKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFE 528
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+++ G +P + +Y+ I + GN++ A + KEM + + R
Sbjct: 529 DVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCR 571
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 116/241 (48%), Gaps = 11/241 (4%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
++ +M G+ EK V+ + G P +Y L+ ++ + ++ +A ++ + M+
Sbjct: 437 YHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMK 496
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
++H++ Y+ +I GF ++ + A F ++ G++ V + +++ +C G++D
Sbjct: 497 SVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMD 556
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLI---GELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
AI + +M ++ P T +I + RR E D+++ + G PT ++
Sbjct: 557 RAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMR----RSGCIPTVHTF 612
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV----EMATMLRK 482
L+ GL E+ KME+A+++ EM G P Y+ + GY G+ E T +R
Sbjct: 613 NALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRN 672
Query: 483 E 483
E
Sbjct: 673 E 673
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 108/262 (41%), Gaps = 51/262 (19%)
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
++I M+ G V T NAL+ G++ ++ + V LD A AG
Sbjct: 593 ALEIFDMMRRSGCIPTVHTFNALVL------GLVEKRKMEKAVEILDEMALAG------- 639
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V P+ HT+ +M G+ G K + + +M G + D ++Y L+ C+ RM+
Sbjct: 640 ---VSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQ 696
Query: 300 -----------------------------------EAEKLWEEMRDKNVEHDVVAYNTII 324
EA L ++M + V+ D+ Y + I
Sbjct: 697 SALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFI 756
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
C+ G+M RA + EM +GV+ + T+ L++G+ A + A+ + ++ G +
Sbjct: 757 NACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLK 816
Query: 385 PEGSTIEVLIGELCDKRRVFEA 406
P+ + L+ L + V EA
Sbjct: 817 PDKAVYHCLMTSLLSRATVAEA 838
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 18/202 (8%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+ + GL + V T AL+ + + S + RE+ + +++ R N
Sbjct: 670 MRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREM-------------NAQKIPR---N 713
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+N L+ G+ R G + D+ +M + G +PD ++Y+ + C+ M A K E
Sbjct: 714 TFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTME 773
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
EM V+ +V Y T+I G+ +A F E+ L+G++ + L+
Sbjct: 774 EMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLSRA 833
Query: 367 DVDSAILVYN--DMCRKGFEPE 386
V A + +CR+ E E
Sbjct: 834 TVAEAYIYSGILSICREMIEFE 855
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 130/240 (54%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N+L+ G+ + G E+VE + EM + GC D +Y+ L+ F + RM +A
Sbjct: 233 PDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSY 292
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM+ + V +VV ++T + FC+ G + A + F +M + G+ + T+ LV+G C+
Sbjct: 293 FGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCK 352
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG +D AI++ ++M +G P T V++ LC + +V EA ++L + + + G+ E
Sbjct: 353 AGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVL-SLMERGGVKANEL 411
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G E AL + +M KG E + +Y I G K+ V+ A L +M
Sbjct: 412 LYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKM 471
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 127/248 (51%), Gaps = 1/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+ ++ G +EG + ++V M R G + + Y+ L+ A L
Sbjct: 373 PNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDL 432
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M++K +E DV Y T+I G C+ ++ A+ +M G+ ++V + +++ +
Sbjct: 433 LNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFK 492
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG A+ + + + GF+P T LI LC + EA+ ++ + GL P +
Sbjct: 493 AGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFN-KMRELGLDPNVQ 551
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C+ G + +A+ + EM+ KG +Y++ IDGYMK+ N++ A L+ +M
Sbjct: 552 AYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKM 611
Query: 485 FENQVRQE 492
E+ ++ +
Sbjct: 612 IESGLQLD 619
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 117/239 (48%), Gaps = 1/239 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V + L+ G ++ ++ + + +MA G P+ Y+ +M + + EA L
Sbjct: 444 DVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALL 503
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++ D + +VV Y +I G C+ G ++ A F +M G++ + + L++G+C+
Sbjct: 504 HKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKI 563
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G ++ A+ + N+M KG + LI + + +A LK ++++ GL
Sbjct: 564 GSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAF-ALKTKMIESGLQLDLYC 622
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y I G C M+EA V +EM+G G P +Y+ I Y K GN+E A+ L+ EM
Sbjct: 623 YTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 130/247 (52%), Gaps = 1/247 (0%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T+N L+ + +G + ++ EM G PD ++Y++L+ C+E +++A +++E
Sbjct: 252 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 311
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M + V VV Y +I + G++ ++ F E G+ V + L+N + +G
Sbjct: 312 NMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 371
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++D A + +M +K P+ T L+ LC RV EA ++ + + G+ P +Y
Sbjct: 372 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID-EMTERGIQPDLVTY 430
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI G +G +++AL+++ EM+ KGF P+L Y+A I G K G + A + KEM E
Sbjct: 431 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 490
Query: 487 NQVRQED 493
N + +D
Sbjct: 491 NGITPDD 497
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 146/297 (49%), Gaps = 19/297 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEV-SRGKGVISGYEIYREVFGLDSDATAGIG 234
K++T + ++ RG+++ V+T N L+ + G+G YE+ E+ G G+
Sbjct: 232 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT-EAYELVEEMGG------KGLA 284
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
P+V T+N L+ G +EG +K +++ M+R G +Y+ L+ +
Sbjct: 285 ----------PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 334
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ +++E +KL++E + + D+V YN +I G + RA E EM + VT
Sbjct: 335 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 394
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ G C G VD A + ++M +G +P+ T LI K V +AL I + +
Sbjct: 395 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRI-RNEM 453
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ G PT +Y LI+GLC+ G+ ++A + EMV G P Y + I+G E
Sbjct: 454 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 510
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 138/315 (43%), Gaps = 73/315 (23%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEM-ARLGCEPDCYSYSVLMAVFCEERRMREAE 302
RPN T+N ++ GF G + D+ EM R G P+ Y+Y +++ +C+ R+ EA
Sbjct: 142 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 201
Query: 303 KLWEEMRDKN-VEHDVVAYNTIIGGFCEIGEM---------------------------- 333
K+++EM K V+ + V YN +IGG+C+ G++
Sbjct: 202 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 261
Query: 334 -------ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
A E EMG G+ T+ L+NG+C+ G+V A+ ++ +M R+G
Sbjct: 262 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 321
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFG---------------------------- 418
T LI L K +V E D L V+ G
Sbjct: 322 VVTYTALIYALSKKGQVQET-DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 380
Query: 419 -------LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ P + +Y L++GLC G+++EA K+ EM +G +P L Y+ I GY +
Sbjct: 381 GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMK 440
Query: 472 GNVEMATMLRKEMFE 486
G+V+ A +R EM
Sbjct: 441 GDVKDALRIRNEMMN 455
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 121/225 (53%), Gaps = 11/225 (4%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
++ +M RL ++++++ C + A +L +M N V YNT+I GFC
Sbjct: 101 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNA----VTYNTVIAGFC 156
Query: 329 EIGEMARAEEFFREMG-LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG-FEPE 386
G + A + REM G+ + T+ +++G+C+ G VD A+ V+++M KG +PE
Sbjct: 157 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 216
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
LIG CD+ ++ AL + + R+V+ G+ T +Y L+ L +G+ EA ++
Sbjct: 217 AVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 275
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
EM GKG P + Y+ I+G+ KEGNV+ A E+FEN R+
Sbjct: 276 EEMGGKGLAPDVFTYNILINGHCKEGNVKKAL----EIFENMSRR 316
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P++ T+N L+ G+ +G + + EM G P +Y+ L+ C+ + +AE
Sbjct: 423 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 482
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+ +EM + + D Y ++I G E A +E
Sbjct: 483 NMVKEMVENGITPDDSTYISLIEGLTTEDERAIDDE 518
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 129/246 (52%), Gaps = 2/246 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V F+ ++ +EG + DV M G EP+ +Y+ LM C + M EA
Sbjct: 274 KIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEA 333
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+++ M +V++YNT+I G+C+I M +A F EM + ++VT+ L++
Sbjct: 334 VKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH- 392
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C G + AI ++++M G P+ +T +L+ LC K + EA+ +LK + + P
Sbjct: 393 XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT-IEGSNMDP 451
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ Y +I G+C G++E A + + + KG P++ Y+ I+G + G ++ A L
Sbjct: 452 DIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLF 511
Query: 482 KEMFEN 487
EM N
Sbjct: 512 MEMDGN 517
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 6/245 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+ +L+ ++ V + +M PD +S ++ C+E ++ EA
Sbjct: 240 ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAH 299
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M + VE +VV YN ++ G C EM A + F M +G + +++ L+NGY
Sbjct: 300 DVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGY 359
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ +D A ++ +MC+K P T L+ C R+ +A+ + +V G P
Sbjct: 360 CKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRLQDAIALFH-EMVAHGQIPD 417
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ LC++ ++EA+ + + G +P ++IY+ IDG + G +E A +
Sbjct: 418 LATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAA----R 473
Query: 483 EMFEN 487
++F N
Sbjct: 474 DIFSN 478
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 2/250 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ + V PNV T+NALM G + ++ V+ M G P+ SY+ L+ +C+
Sbjct: 303 DMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKI 362
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+RM +A L+EEM K + + V YNT++ C +G + A F EM G T+
Sbjct: 363 QRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRLQDAIALFHEMVAHGQIPDLATY 421
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++ C+ +D A+ + + +P+ ++I +C + A DI
Sbjct: 422 RILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSS 481
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K GL P ++Y +I GLC G ++EA K+ EM G G P Y+ G ++
Sbjct: 482 K-GLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEAL 540
Query: 476 MATMLRKEMF 485
A L +EM
Sbjct: 541 RAIQLLQEML 550
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 1/246 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ TF L+ G EG ++ +M G +P+ +Y L+ C+ A +
Sbjct: 136 QPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIR 195
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L M N + DVV Y +II C+ ++ A F +M G+ T+ L++ C
Sbjct: 196 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLC 255
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ + N M P+ ++ LC + ++ EA D++ +++ G+ P
Sbjct: 256 NLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIR-GVEPNV 314
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ G C + +M+EA+KV MV G+ P++ Y+ I+GY K ++ AT L +E
Sbjct: 315 VTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEE 374
Query: 484 MFENQV 489
M + ++
Sbjct: 375 MCQKEL 380
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 110/233 (47%), Gaps = 1/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ FN L+ + + V + +M G PD Y+ ++L+ FC R+ A +
Sbjct: 67 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ + D + T+I G C G++ A F +M G + + VT+ L+NG C+
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ ++AI + M + +P+ +I LC R+V EA ++ +++V G+ P
Sbjct: 187 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLF-SKMVGQGISPDIF 245
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI LC + + + +M+ P + I+S +D KEG + A
Sbjct: 246 TYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEA 298
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 98/200 (49%), Gaps = 3/200 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N LM + G + ++ EM G PD +Y +L+ C++ + EA L
Sbjct: 382 PNTVTYNTLMHXCHV-GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMAL 440
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + N++ D+ Y +I G C GE+ A + F + G+ + T+ ++NG CR
Sbjct: 441 LKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCR 500
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +D A ++ +M G P+G T + L + A+ +L+ + + G
Sbjct: 501 RGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLAR-GFSADVS 559
Query: 425 SYMFLIKGLCEEGKMEEALK 444
+ L++ LC++ K+++++K
Sbjct: 560 TTTLLVEMLCDD-KLDQSVK 578
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RPNV T+ ++ G R G ++ +++EM GC PD +Y+ + + + A
Sbjct: 484 LRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAI 543
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+L +EM + DV ++ C+
Sbjct: 544 QLLQEMLARGFSADVSTTTLLVEMLCD 570
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 188/400 (47%), Gaps = 30/400 (7%)
Query: 82 KNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKL 141
+ +P AL F+ + H+ ++YATI+H L++++ V+
Sbjct: 140 ETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQM---------- 189
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK-VSTCN 200
TY C +F L+K ++ E++ D + ++ S+K +STC
Sbjct: 190 --------TYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIXPIVREKPSLKAISTCL 241
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
L+ E ++ +I D+ + +++K+ PN+ T++ L+ G
Sbjct: 242 NLLVESNQSSITAKNGDI---------DSAFEVVEEMKKSHVSYPNLITYSTLINGLCGS 292
Query: 261 GAFEKVEDVWVEM-ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G ++ +++ EM ++ PD +Y+ L+ FC ++ A K+ E M+ +V
Sbjct: 293 GRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFN 352
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
Y+ ++ GFC+ G + A+E F EM G++ +V + L+N +CRAG VD A+ + DM
Sbjct: 353 YSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMX 412
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+ T V++G LC + R EA +L+ R+ G++ + SY ++ LC EG++
Sbjct: 413 ENKCRADTVTFNVILGGLCREGRFEEAXGMLE-RLPYEGVYLNKASYRIVLNSLCREGEL 471
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
++A ++ M+G+G P + + + G V A M
Sbjct: 472 QKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVM 511
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
Query: 331 GEMARAEEFFREMGLSGVESSS-VTFEHLVNGYCRAGDVDSAILVYNDMCRKG-FEPEGS 388
G++ A E EM S V + +T+ L+NG C +G + AI ++ +M K P+
Sbjct: 257 GDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDAL 316
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
T LI C +V AL I++ + K G P +Y L+ G C+EG++EEA +V E
Sbjct: 317 TYNALINGFCHGXKVDRALKIMEF-MKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDE 375
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
M G +P Y+ I+ + + G V+ A L K+M EN+ R +
Sbjct: 376 MKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRAD 419
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 181/411 (44%), Gaps = 56/411 (13%)
Query: 80 GLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR-VALRSPEND 138
L+ NP +L FF + + +SSY I+HILSRAR+ R + + + N
Sbjct: 107 NLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNY 166
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
+++ LV YRE +P VFD+ I+++ +G++ K +
Sbjct: 167 IASAVWDELVSVYREFSFSPTVFDM-------------------ILKVFAEKGMT-KFAL 206
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
C VF D+ G RV P++ + N+L+
Sbjct: 207 C----------------------VF--DNMGKCG---------RV-PSLRSCNSLLSNLV 232
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ G K V+ +M LG PD +SY++++ +C+E R+ EA +EM E +VV
Sbjct: 233 QNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVV 292
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
YN++I G+ +G++ A++ M G+ +S T+ L+ GYC+ G ++ A + M
Sbjct: 293 TYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCM 352
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
K + VLI C RV +AL I A ++K GL LI G C+ G
Sbjct: 353 MEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDA-MLKVGLKMNTVICNSLINGYCKLGH 411
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ +A +V M +P Y+ +DG+ K+ + A L EM V
Sbjct: 412 VNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGV 462
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 126/261 (48%), Gaps = 7/261 (2%)
Query: 230 TAGIGKDVKRV------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
TAG D R+ V ++ N N+L+ G+ + G K +V V M +PD Y
Sbjct: 373 TAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSY 432
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
Y+ L+ FC++ +A KL +EM +K V VV YNT++ +G + A + M
Sbjct: 433 GYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLM 492
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
GV + VT+ L++ + + G D A++++ D KGF + +I C ++
Sbjct: 493 HKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKL 552
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
+A +I ++ + G P E +Y LI G C+ G + EALK++ G S E+Y++
Sbjct: 553 VQAQEIF-LKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNS 611
Query: 464 FIDGYMKEGNVEMATMLRKEM 484
I G + ++ L EM
Sbjct: 612 LITGVFRSEELQKLNGLLAEM 632
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 125/290 (43%), Gaps = 36/290 (12%)
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
KD+ + + +N+L+ G +R +K+ + EM P+ +Y L+A +C+
Sbjct: 594 KDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCD 653
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE----------------- 337
+ M +A + +M DK + +++ + I+ G++ A
Sbjct: 654 KGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAH 713
Query: 338 ------------------EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
+ F + +S S+++ + + G C++ ++D + +D+
Sbjct: 714 SVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLL 773
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KGF P+ T LI +V EA L+ ++ GL P Y LI GLC+ G +
Sbjct: 774 LKGFCPDNYTYCSLIHACSAVGKVNEAF-CLRDDMINAGLVPNIVVYNALINGLCKSGNL 832
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ A ++ ++ KG P++ Y+ IDGY K G A L+ +M E +
Sbjct: 833 DRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGI 882
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 113/279 (40%), Gaps = 36/279 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV T+ +L+ G+ +G +K + + +M G P+ S +++ ++ EA
Sbjct: 637 LSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEAN 696
Query: 303 KLWEEMRD---------------KNVEH--------------------DVVAYNTIIGGF 327
+ ++ D ++ H + + YN I G
Sbjct: 697 LILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGL 756
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ + ++ L G + T+ L++ G V+ A + +DM G P
Sbjct: 757 CKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNI 816
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
LI LC + A + ++ + GL PT +Y LI G C+ G+ EAL+++
Sbjct: 817 VVYNALINGLCKSGNLDRARRLFN-KLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKD 875
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+M +G PS YS I G EG E + L EM +
Sbjct: 876 KMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMK 914
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 3/171 (1%)
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y++ + C+ + + + ++ ++ K D Y ++I +G++ A +M
Sbjct: 749 YNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMI 808
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
+G+ + V + L+NG C++G++D A ++N + RKG P T LI C R
Sbjct: 809 NAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTT 868
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV--GKG 453
EAL+ LK ++ + G+ P+ +Y LI GL EGK E+++ + EM+ GKG
Sbjct: 869 EALE-LKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKG 918
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN T+ L+ F++ G F++ +W + G Y+ ++ FC+ ++ +A+
Sbjct: 497 VAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQ 556
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ +M++ D + Y T+I G+C++G + A + G+ SS+ + L+ G
Sbjct: 557 EIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGV 616
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
R+ E + L+ E+ ++ L VV +G
Sbjct: 617 FRS-------------------EELQKLNGLLAEMKNRE--------LSPNVVTYG---- 645
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
LI G C++G M++A +M+ KG P++ I S + + G ++ A ++
Sbjct: 646 -----SLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILH 700
Query: 483 EM 484
++
Sbjct: 701 QI 702
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +T+ +L+ G + + +M G P+ Y+ L+ C+ + A +L
Sbjct: 779 PDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRL 838
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ ++ K + VV YNT+I G+C+ G A E +M G+ SS+T+ L++G
Sbjct: 839 FNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYM 898
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTI 390
G + ++ + N+M + G +GS++
Sbjct: 899 EGKSEQSVGLLNEMMKAG---KGSSV 921
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 174/402 (43%), Gaps = 41/402 (10%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+Y ++IH L +AR + A+ ++R + P + L+ Y G
Sbjct: 248 TYNSVIHALCKARAVDKAQGILR-QMVGNGVQPDNVTYNTLIHGYSTLG----------- 295
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG-- 224
+ + V + + + SRG+ TC+ + + + + E + +
Sbjct: 296 ---------QWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKG 346
Query: 225 -----------LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVE 267
L ATAG D+ + + PN H FN L+ G+ + G +
Sbjct: 347 HKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAM 406
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
++ +M + G PD +Y ++ FC M +A + M DK VE + Y +I GF
Sbjct: 407 FIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGF 466
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C G++ +AEE E+ G+ ++F L+N C+ G V A +++ + R G + +
Sbjct: 467 CTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADV 526
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+ LI C ++ EA + A +V G+ P +Y L+ G C+ G++++ L +
Sbjct: 527 NIFTSLIDGYCLIGKMSEAFRVHDA-MVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFR 585
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
E++ KG +P+ Y +DG G A + +EM E+ +
Sbjct: 586 ELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGI 627
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 140/299 (46%), Gaps = 17/299 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K+ D+ + +G+ V T N++I + + + V I R++ G
Sbjct: 226 KVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNG--------- 276
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
V+P+ T+N L+ G+ G +++ ++ EM G P+ + S +A C+
Sbjct: 277 -------VQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKH 329
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ EA + ++ M K + ++++Y+T++ G+ G + F M G+ + F
Sbjct: 330 GRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVF 389
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
LVNGY + G V A+ ++ DM ++G P+ T +I C + +A+D +
Sbjct: 390 NILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMID 449
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
K G+ P Y LI+G C G + +A ++ E+ KG P + +++ I+ KEG V
Sbjct: 450 K-GVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRV 507
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 176/414 (42%), Gaps = 79/414 (19%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECG---SAP 158
K ++ SY+T++H + A + ++ + +R P +F +LV Y +CG A
Sbjct: 348 KLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIV-PNQHVFNILVNGYAKCGMVREAM 406
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
F+F+ + K RGL+ V T A+I R
Sbjct: 407 FIFEDMQK-----------------------RGLNPDVLTYLAVIHAFCR---------- 433
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
G DA + + V PN + L+ GF G K E++ E+ G
Sbjct: 434 ----MGSMDDAMDKFNHMIDK--GVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGL 487
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P S++ L+ C+E R+ EA+++++ + + DV + ++I G+C IG+M+ A
Sbjct: 488 GPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFR 547
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
M G+E VT+ LVNG C+ G +D ++++ ++ KG +P T +++ L
Sbjct: 548 VHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLF 607
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE---------- 448
R A ++ + +++ G+ T +Y L+ GLC EEA+ V +
Sbjct: 608 HAGRTAAAKEMFQ-EMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDI 666
Query: 449 -----MVGK--------------------GFEPSLEIYSAFIDGYMKEGNVEMA 477
M+ K G P+++ Y+ ++ +KEG+VE A
Sbjct: 667 VILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEA 720
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 36/274 (13%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV ++ ++ G ++EG + D++ EM + G P+ +Y+ ++ C+ R + +A+ +
Sbjct: 210 NVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGIL 269
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT----------- 354
+M V+ D V YNT+I G+ +G+ +A F+EM GV ++VT
Sbjct: 270 RQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKH 329
Query: 355 ------------------------FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
+ L++GY AG + ++N M R G P
Sbjct: 330 GRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVF 389
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+L+ V EA+ I + + K GL P +Y+ +I C G M++A+ M+
Sbjct: 390 NILVNGYAKCGMVREAMFIFE-DMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMI 448
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
KG EP+ +Y I G+ G++ A L E+
Sbjct: 449 DKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEI 482
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 38/258 (14%)
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR------------------------ 299
E V+ ++ M LGC PD SYS ++ C++ R +
Sbjct: 156 EAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYS 215
Query: 300 -------------EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
EA L+ EM + V +VV YN++I C+ + +A+ R+M +
Sbjct: 216 TVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGN 275
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
GV+ +VT+ L++GY G A+ ++ +M +G P T + LC R+ EA
Sbjct: 276 GVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEA 335
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ + + K G SY L+ G G + + + MV G P+ +++ ++
Sbjct: 336 REFFDSMLAK-GHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVN 394
Query: 467 GYMKEGNVEMATMLRKEM 484
GY K G V A + ++M
Sbjct: 395 GYAKCGMVREAMFIFEDM 412
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 2/138 (1%)
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ L++ CRA +D A + + R+G + + + L+ LCD +R EA+D+L R
Sbjct: 105 TYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHR 164
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV--QAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ + G P SY ++K +C++G+ + AL + A G G ++ +YS + G KE
Sbjct: 165 MPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKE 224
Query: 472 GNVEMATMLRKEMFENQV 489
G V A L EM + V
Sbjct: 225 GKVGEACDLFHEMTQQGV 242
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 45/251 (17%)
Query: 280 PDCYSYSVLMAVFCEERR-----------MREAEK------------------------- 303
P Y+YS+L+ C RR +R+ K
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR---EMGLSGVESSSVTFEHLVN 360
L+ M + D ++Y+T++ C+ G A + R + G G + V + +V+
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQG-GGCPCNVVVYSTVVH 219
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G + G V A ++++M ++G P T +I LC R V +A IL+ ++V G+
Sbjct: 220 GLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILR-QMVGNGVQ 278
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y LI G G+ ++A+++ EM +G P+ S F+ K G +E A
Sbjct: 279 PDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEA--- 335
Query: 481 RKEMFENQVRQ 491
+E F++ + +
Sbjct: 336 -REFFDSMLAK 345
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 3/204 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P T+ ++ G + G ++++ EM G +YS+L+ C EA
Sbjct: 592 VKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAI 651
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++++ NV+ D+V N +I + AE F + G+ + T+ ++
Sbjct: 652 TVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENL 711
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV-VKFGLFP 421
+ G V+ A V++ M + G P I V++ L +K + +A I RV K LF
Sbjct: 712 IKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKA-GIYMCRVDGKSILFE 770
Query: 422 TEKSYMFLIKGLCEEGKMEEALKV 445
+ M L C +GK E L +
Sbjct: 771 ASTASMLLSLFSC-KGKHREHLNL 793
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 1/246 (0%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
++ ++PN+ T+N L+ G + GA EK + + EM G P ++ ++ + RR+
Sbjct: 616 KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRL 675
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+ E M + + D+ YNT++ C G +A EM SG+ ++TF L
Sbjct: 676 DVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+ G+C++ +D+A Y M + P +T L+G L R+ EA +L + K G
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL-IEMEKSG 794
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
L P +Y L G ++ EA+++ EMVGKGF P + Y+A I + K G + A
Sbjct: 795 LEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAK 854
Query: 479 MLRKEM 484
L K+M
Sbjct: 855 ELFKDM 860
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 198/451 (43%), Gaps = 66/451 (14%)
Query: 58 WNHLLS-LCRSGLTPTQFS----QIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATII 112
WN L++ CR G TP S A GL + + Y T++
Sbjct: 172 WNTLIAGYCRVGDTPAALSVADRMTAQGLPMD--------------------VVGYNTLV 211
Query: 113 HILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVK 172
RA + AR V+ + ++ DP V TY PF+ + C
Sbjct: 212 AGFCRAGQVDAARGVLDM-MKEAGVDPN-------VATY-----TPFI----VYYC---- 250
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG-------- 224
+ +E D+ ++ G+ + V T +AL+ + R Y ++RE+
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310
Query: 225 -----LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
+DS A AG GK++ ++ V ++ T+ ALM ++G ++V+D
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
P+ +Y+VL+ C+ + EAE++ EM +K++ +VV ++++I GF + G +
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+A E+ R M G+ + VT+ L++G+ + D+A+ VY+DM +G + ++ L
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSL 490
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ L ++ EA+ + K GL +Y LI GL + G M A K E++ +
Sbjct: 491 VNGLRQNGKIEEAMALFK-DASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P +Y+ FI+ G + A EM
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 167/390 (42%), Gaps = 22/390 (5%)
Query: 106 SSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLI 165
+S +++ R RL+ PA ++R + P + +L+ + AP V +
Sbjct: 74 ASLNALLYSHCRLRLLRPAIALLR------SSRPTTVAYNILLAALSDHAHAPAVLAEMC 127
Query: 166 KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV----ISGYEIYRE 221
K + + T ++ L G +V AL RG G+ + G+
Sbjct: 128 KRGVPFDGV----TVNTLLAGLCRNG---QVDAAAAL---ADRGGGIHALDVIGWNTLIA 177
Query: 222 VFGLDSDATAGIGKDVKRVVRVRP-NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
+ D A + + + P +V +N L+ GF R G + V M G +P
Sbjct: 178 GYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP 237
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+ +Y+ + +C + + EA L+E M V DVV + ++ G C G + A F
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
REM G + VT+ L++ +AG + + +M +G + T L+ L +
Sbjct: 298 REMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQ 357
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+ E D L+ + L P +Y LI LC+ ++EA +V EM K P++
Sbjct: 358 GKTDEVKDTLRFALSD-NLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVT 416
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+S+ I+G++K G ++ AT ++ M E +
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGIN 446
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 138/325 (42%), Gaps = 22/325 (6%)
Query: 185 RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV---------FGLDS-------- 227
RM+ RG++ V T LI + +G + E+Y ++ F +DS
Sbjct: 438 RMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQN 497
Query: 228 ---DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+ + KD +V+ + L+ G ++ G E+ PD
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVN-YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+V + C + +EA+ EMR+ ++ D YNT+I C GE A+A + EM
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
+S ++ + +T+ LV G G V+ A + N+M GF P T ++ RR+
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
LDI ++ GL Y L++ LC G +A V EM+G G P ++A
Sbjct: 677 VILDI-HEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735
Query: 465 IDGYMKEGNVEMATMLRKEMFENQV 489
I G+ K +++ A +M +
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNI 760
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ PN+ TFN L+ G G + V +EM + G EP+ +Y +L ++ EA
Sbjct: 759 NISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEA 818
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L+ EM K V YN +I F + G M +A+E F++M GV +S T++ LV+G
Sbjct: 819 MRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878
Query: 362 Y 362
+
Sbjct: 879 W 879
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 84/211 (39%), Gaps = 14/211 (6%)
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D S + L+ C R +R A L R VAYN ++ + + A A
Sbjct: 72 DPASLNALLYSHCRLRLLRPAIALLRSSRPT-----TVAYNILLAA---LSDHAHAPAVL 123
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI--EVLIGELC 398
EM GV VT L+ G CR G VD+A + + R G I LI C
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD---RGGGIHALDVIGWNTLIAGYC 180
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
AL + R+ GL Y L+ G C G+++ A V M G +P++
Sbjct: 181 RVGDTPAALSVAD-RMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
Y+ FI Y + VE A L + M N V
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMVRNGV 270
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 127/250 (50%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ +TFN L+ + G +K ++ EM G +PD +Y ++A C +M +A
Sbjct: 393 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 452
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + +M D+ V D AYN +I GFC G + +A+E E+ +G+ V F ++N
Sbjct: 453 EKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 512
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G V A +++ G P+ +L+ C ++ +AL + A +V G+ P
Sbjct: 513 CKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA-MVSAGIEPN 571
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y L+ G C+ G+++E L + EM+ +G +PS +YS IDG + G A M
Sbjct: 572 VVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFH 631
Query: 483 EMFENQVRQE 492
EM E+ + +
Sbjct: 632 EMTESGIAMD 641
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 142/298 (47%), Gaps = 17/298 (5%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+ D+ + ++ RG+ + T N+++ + + + + R++
Sbjct: 238 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN------------ 285
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
RV PN T+N L+ G+ G +++ V+ EM R PD + S+LM C+
Sbjct: 286 ----KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 341
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+++EA +++ M K DV +YN ++ G+ G + + F M G+ TF
Sbjct: 342 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFN 401
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L+ Y G +D A++++N+M G +P+ T +I LC ++ +A++ +++
Sbjct: 402 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFN-QMID 460
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
G+ P + +Y LI+G C G + +A ++ +E++ G + +S+ I+ K G V
Sbjct: 461 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 518
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 126/250 (50%), Gaps = 3/250 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG--CEPDCYSYSVLMAVFCEERRMREAE 302
P+V +++ L+ +G + +D+ MA G C P+ +Y+ ++ F +E + +A
Sbjct: 183 PDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKAC 242
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++EM + + D+V YN+++ C+ M +AE F R+M V ++ T+ +L+ GY
Sbjct: 243 DLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGY 302
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G A+ V+ +M R P+ T+ +L+G LC ++ EA D+ +K G P
Sbjct: 303 SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK-GQNPD 361
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY ++ G +G + + + M+G G P ++ I Y G ++ A ++
Sbjct: 362 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 421
Query: 483 EMFENQVRQE 492
EM ++ V+ +
Sbjct: 422 EMRDHGVKPD 431
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 34/277 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV +N ++ GF++EG K D++ EM + G PD +Y+ ++ C+ R M +AE
Sbjct: 220 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 279
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M +K V + YN +I G+ G+ A F+EM + VT L+ C+
Sbjct: 280 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 339
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFEAL----------- 407
G + A V++ M KG P+ + +++ G L D +F+ +
Sbjct: 340 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 399
Query: 408 -DIL-----------KARVV-----KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
++L KA ++ G+ P +Y +I LC GKM++A++ +M+
Sbjct: 400 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 459
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+G P Y+ I G+ G++ A L E+ N
Sbjct: 460 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNN 496
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 125/269 (46%), Gaps = 34/269 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ + +N L+ GF G+ K +++ E+ G D +S ++ C+ R+ +A+
Sbjct: 463 VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 522
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ + + D V YN ++ G+C +G+M +A F M +G+E + V + LVNGY
Sbjct: 523 NIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 582
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE-------------ALDI 409
C+ G +D + ++ +M ++G +P ++I L + R A+DI
Sbjct: 583 CKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDI 642
Query: 410 LKARVVKFGLFPT----EKSYMF-----------------LIKGLCEEGKMEEALKVQAE 448
+V GLF E ++F +I G+ + ++EEA + A
Sbjct: 643 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFAS 702
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ PS+ YS I +KEG VE A
Sbjct: 703 ISRSRLVPSVVTYSIMITNLIKEGLVEEA 731
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 157/352 (44%), Gaps = 26/352 (7%)
Query: 125 RDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVD 182
R VI R + D ++ F ++ G AP + ++ LI+ ++ K + +
Sbjct: 436 RTVIAALCRIGKMDDAMEKFNQMIDQ----GVAPDKYAYNCLIQGFCTHGSLLKAK---E 488
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
++ +M+ G+ + + +++I + + V+ I+ D T +G
Sbjct: 489 LISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF--------DLTVNVG-------- 532
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ +N LM G+ G EK V+ M G EP+ Y L+ +C+ R+ E
Sbjct: 533 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 592
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ EM + ++ + Y+ II G E G A+ F EM SG+ T+ ++ G
Sbjct: 593 SLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGL 652
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ D AI ++ ++ + T+ +I + RRV EA D+ A + + L P+
Sbjct: 653 FKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF-ASISRSRLVPS 711
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+Y +I L +EG +EEA + + M G EP+ + + + +K+ +
Sbjct: 712 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEI 763
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
R G + +S T+ L++ RA + A+ + + R G L+ C+
Sbjct: 103 RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEA 162
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA---LKVQAEMVGKGFEPS 457
+R EALDIL R + G P SY L+K LC++GK +A L++ AE G P+
Sbjct: 163 KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG-GAVCSPN 221
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ Y+ IDG+ KEG+V A L KEM + +
Sbjct: 222 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI 253
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 76/168 (45%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ T+N ++ G ++ F++ ++ E+ + + + + + ++ + RR+ EA+ L+
Sbjct: 641 DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 700
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ + VV Y+ +I + G + AE+ F M +G E +S H+V +
Sbjct: 701 ASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKK 760
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
++ A + + + F E T +L+ K E + L A+
Sbjct: 761 NEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPAK 808
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 130/251 (51%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V TFN L+ + G EK V +M + G + D S+ ++ FC+ ++ EA
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 494
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ ++M K+V + YN+II + E G+ +A +M SGV +S VT+ L+ G
Sbjct: 495 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGL 554
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR+ +D A + + +G P+ + +I C+K +AL++L+ + K+G+ PT
Sbjct: 555 CRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQ-EMNKYGIRPT 613
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++Y L+ L G++ + + +M+ K EPS IY +D Y++ N L+K
Sbjct: 614 LRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKK 673
Query: 483 EMFENQVRQED 493
EM E + +D
Sbjct: 674 EMSEKGIAFDD 684
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 120/243 (49%), Gaps = 36/243 (14%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+T + L+ G ++G K E V + G P Y+ L+ +C+ R +R A ++E
Sbjct: 334 AYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFE 393
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+M+ +++ D + YN +I G C++ + +AE+ EM SGV+ S TF L++ Y AG
Sbjct: 394 QMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAG 453
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++ V +DM +KG +K+ V+ FG
Sbjct: 454 QLEKCFTVLSDMQQKG---------------------------IKSDVISFG-------- 478
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
++K C+ GK+ EA+ + +M+ K P+ ++Y++ ID Y++ G+ E A +L ++M
Sbjct: 479 -SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKN 537
Query: 487 NQV 489
+ V
Sbjct: 538 SGV 540
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 118/271 (43%), Gaps = 13/271 (4%)
Query: 231 AGIGKDVKRV------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+G G D +V + V PN T+N ++ G + G E + +M G +P+ +
Sbjct: 207 SGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVT 266
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+VL++ C RM E L +EM ++ D Y+ + G GE F E
Sbjct: 267 YNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESL 326
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKR 401
GV + T L+NG C+ G V A V + G P LI C D R
Sbjct: 327 KKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLR 386
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
F + +K+R ++ P +Y LI GLC+ + +A + EM G +PS+E +
Sbjct: 387 GAFCIFEQMKSRHIR----PDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF 442
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ ID Y G +E + +M + ++ +
Sbjct: 443 NTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 473
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 109/245 (44%), Gaps = 1/245 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ ++N ++ G +R G V+ EM +G P+ +Y+ ++ + + +L
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 251
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M + ++V YN ++ G C G M EM + T+ L +G R
Sbjct: 252 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 311
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ + + ++ + +KG T +L+ LC +V +A +L+ +V GL PT
Sbjct: 312 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEM-LVHTGLVPTTV 370
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G C+ + A + +M + P Y+A I+G K V A L EM
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 430
Query: 485 FENQV 489
++ V
Sbjct: 431 EKSGV 435
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 201/474 (42%), Gaps = 59/474 (12%)
Query: 24 SQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWN-----HLLSLCRSGLTPTQFSQIA 78
+Q S S+ H ++ V L+T S WN L L RS L P+ +
Sbjct: 115 TQNIASIEIDDSEFRHPVVREVCRLIT---LSSAWNPNFEGRLRHLLRS-LKPSLVCAV- 169
Query: 79 LGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALR----- 133
L + + +AL FF + + H Y T++ +LS+ +L AR V+R+ R
Sbjct: 170 LRSQADERVALNFFYWADRQWRYSHHPLVYYTLLDVLSKTKLCQGARRVLRLMTRRGIEL 229
Query: 134 SPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLS 193
SPE F ++ +Y G K+ + ++ ++ G+
Sbjct: 230 SPE------AFGCVMVSYSRAG--------------------KLRNALRVLTLMQKAGVE 263
Query: 194 VKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNAL 253
+S CN I+ + +G + + +V ++P++ T+N+L
Sbjct: 264 PNLSICNTTIYVLVKGCKLEKALRFLERM----------------QVTGIKPDIVTYNSL 307
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM-RDKN 312
+ G+ E ++ + GC PD SY +M C+E+++ + + L E+M +D N
Sbjct: 308 IKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSN 367
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ D V YNT+I + G A F +E G V + +V+ +C+ G +D A
Sbjct: 368 LIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAK 427
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+ DM + P+ T ++ C R+ EA +L+ ++ K G P SY L+ G
Sbjct: 428 SLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQ-QMYKHGCKPNTVSYTALLNG 486
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LC GK EA ++ + P+ Y + G+ +EG + A L +EM E
Sbjct: 487 LCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVE 540
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 119/245 (48%), Gaps = 3/245 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+ +M GF REG + D+ EM G P ++L+ C+ +++ EA+K
Sbjct: 510 PNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKY 569
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EE +K +VV + T+I GFC+IG+M A +M LS +VT+ L + +
Sbjct: 570 LEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGK 629
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +D A + M KG +P T +I C RV + L++L R+VK F T
Sbjct: 630 KGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLD-RMVKRKPFRT-- 686
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y +I+ LC+ G +EEA K+ +++ + ++ +K+G A + +M
Sbjct: 687 IYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQM 746
Query: 485 FENQV 489
F +
Sbjct: 747 FRRNL 751
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 114/252 (45%), Gaps = 4/252 (1%)
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
+R + + P F +MV + R G V M + G EP+ + + V +
Sbjct: 223 TRRGIELSP--EAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGC 280
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
++ +A + E M+ ++ D+V YN++I G+C++ + A E + G V++
Sbjct: 281 KLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYY 340
Query: 357 HLVNGYCRAGDVDSAILVYNDMCR-KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
++ C+ ++ + M + P+ T LI L +AL LK
Sbjct: 341 TVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAED 400
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K G + Y ++ C++G+M+EA + +M + P + Y+A +DG+ + G ++
Sbjct: 401 K-GFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRID 459
Query: 476 MATMLRKEMFEN 487
A + ++M+++
Sbjct: 460 EAKKMLQQMYKH 471
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 137/331 (41%), Gaps = 21/331 (6%)
Query: 97 HKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN--DPKLKLFEVLVKTYREC 154
+K CK + SY +++ L + AR++I V S E+ P + V++ +R
Sbjct: 469 YKHGCKPNTVSYTALLNGLCHSGKSLEAREMINV---SEEHWWTPNAITYGVVMHGFRRE 525
Query: 155 GSAPFVFDLLIKCCLEVKNIEK--IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
G L C L + +EK T V+I ++ S + KV + E
Sbjct: 526 GK------LSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCA 579
Query: 213 ISGYEIYREVFGL----DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVED 268
I+ + G D +A + +D+ + P+ T+ AL ++G ++ +
Sbjct: 580 INVVNFTTVIHGFCQIGDMEAALSVLEDM-YLSNKHPDAVTYTALFDALGKKGRLDEAAE 638
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
+ V+M G +P ++ ++ +C+ R+ + L + M + + YN +I C
Sbjct: 639 LIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRKPFRTI--YNHVIEKLC 696
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ G + AE+ ++ + + + T L+ + G SA V M R+ P+
Sbjct: 697 DFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLTPDLK 756
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGL 419
E + +L + EA D L R V+ G+
Sbjct: 757 LCEKVTKKLVLDGNLVEA-DKLMLRFVERGI 786
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 130/247 (52%), Gaps = 1/247 (0%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T+N L+ + +G + ++ EM G PD ++Y++L+ C+E +++A +++E
Sbjct: 626 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 685
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M + V VV Y +I + G++ ++ F E G+ V + L+N + +G
Sbjct: 686 NMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 745
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++D A + +M +K P+ T L+ LC RV EA ++ + + G+ P +Y
Sbjct: 746 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID-EMTERGIQPDLVTY 804
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI G +G +++AL+++ EM+ KGF P+L Y+A I G K G + A + KEM E
Sbjct: 805 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 864
Query: 487 NQVRQED 493
N + +D
Sbjct: 865 NGITPDD 871
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 166/366 (45%), Gaps = 39/366 (10%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+Y T+I + + A V L E P+ ++ L+ Y + G
Sbjct: 557 TYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG----------- 605
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV-SRGKGVISGYEIYREVFGL 225
K++T + ++ RG+++ V+T N L+ + G+G YE+ E+ G
Sbjct: 606 ---------KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT-EAYELVEEMGG- 654
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
G+ P+V T+N L+ G +EG +K +++ M+R G +Y
Sbjct: 655 -----KGLA----------PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 699
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ L+ ++ +++E +KL++E + + D+V YN +I G + RA E EM
Sbjct: 700 TALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 759
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
+ VT+ L+ G C G VD A + ++M +G +P+ T LI K V +
Sbjct: 760 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKD 819
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
AL I + ++ G PT +Y LI+GLC+ G+ ++A + EMV G P Y + I
Sbjct: 820 ALRI-RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 878
Query: 466 DGYMKE 471
+G E
Sbjct: 879 EGLTTE 884
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 134/252 (53%), Gaps = 3/252 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEM-ARLGCEPDCYSYSVLMAVFCEERRMREAE 302
RPN T+N ++ GF G + D+ EM R G P+ Y+Y +++ +C+ R+ EA
Sbjct: 516 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 575
Query: 303 KLWEEMRDKN-VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+++EM K V+ + V YN +IGG+C+ G++ A + M GV + T+ LV+
Sbjct: 576 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 635
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
G A + +M KG P+ T +LI C + V +AL+I + + + G+
Sbjct: 636 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE-NMSRRGVRA 694
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
T +Y LI L ++G+++E K+ E V +G P L +Y+A I+ + GN++ A +
Sbjct: 695 TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 754
Query: 482 KEMFENQVRQED 493
EM + ++ +D
Sbjct: 755 GEMEKKRIAPDD 766
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 121/225 (53%), Gaps = 11/225 (4%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
++ +M RL ++++++ C + A +L +M N V YNT+I GFC
Sbjct: 475 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNA----VTYNTVIAGFC 530
Query: 329 EIGEMARAEEFFREM-GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG-FEPE 386
G + A + REM G+ + T+ +++G+C+ G VD A+ V+++M KG +PE
Sbjct: 531 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 590
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
LIG CD+ ++ AL + + R+V+ G+ T +Y L+ L +G+ EA ++
Sbjct: 591 AVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 649
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
EM GKG P + Y+ I+G+ KEGNV+ A E+FEN R+
Sbjct: 650 EEMGGKGLAPDVFTYNILINGHCKEGNVKKAL----EIFENMSRR 690
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P++ T+N L+ G+ +G + + EM G P +Y+ L+ C+ + +AE
Sbjct: 797 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 856
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+ +EM + + D Y ++I G E A +E
Sbjct: 857 NMVKEMVENGITPDDSTYISLIEGLTTEDERAIDDE 892
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 163/338 (48%), Gaps = 21/338 (6%)
Query: 155 GSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
G+ P F ++++I C + ++E + ++ RGL T N++I
Sbjct: 90 GAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF---RGLIPDTVTYNSMI--------- 137
Query: 213 ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
+ + +V LD T +++K + P+V T+NAL+ F + G K + + E
Sbjct: 138 ----DGFGKVGRLDD--TVCFFEEMKDMC-CEPDVITYNALINCFCKFGKLPKGLEFFRE 190
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M R G +P+ SYS L+ FC+E M++A K + +MR + + Y ++I +C+IG
Sbjct: 191 MKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGN 250
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
++ A EM GVE + VT+ L++G C + + + ++M + T V
Sbjct: 251 LSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCV 310
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI LC + V +A+D FGL Y +I GLC+ ++E A + +M K
Sbjct: 311 LIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQK 370
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
G P Y++ +DG K+GNV A LR +M E ++
Sbjct: 371 GLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMK 408
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 164/378 (43%), Gaps = 56/378 (14%)
Query: 143 LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
+F+VL T C VFD L +++ +E+ C ++ + K +CN L
Sbjct: 10 VFDVLWSTRNVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFR---VFPKTRSCNGL 66
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
+ + ++ ++++ G AG +P V T+N ++ +EG
Sbjct: 67 LHKFAKLGKTDGVKRFFKDMIG------AG----------AKPTVFTYNIMIDCMCKEGD 110
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
E ++ EM G PD +Y+ ++ F + R+ + +EEM+D E DV+ YN
Sbjct: 111 VEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 170
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I FC+ G++ + EFFREM +G++ + V++ LV+ +C+ G + AI Y DM R G
Sbjct: 171 LINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 230
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
P T LI C + +A L +++ G+ +Y LI GLC E
Sbjct: 231 LVPNEYTYTSLIDAYCKIGNLSDAFR-LANEMLQVGVEWNVVTYTALIDGLCGWENPTEG 289
Query: 443 LKVQAEMV-------------------------------GK-----GFEPSLEIYSAFID 466
L + EMV G+ G + + IY+A ID
Sbjct: 290 LHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMID 349
Query: 467 GYMKEGNVEMATMLRKEM 484
G K VE AT L ++M
Sbjct: 350 GLCKGNQVEAATTLFEQM 367
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 137/287 (47%), Gaps = 37/287 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV +++ L+ F +EG ++ +V+M R+G P+ Y+Y+ L+ +C+ + +A
Sbjct: 196 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAF 255
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFC-------------EIGEM---------------- 333
+L EM VE +VV Y +I G C E+ E+
Sbjct: 256 RLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGL 315
Query: 334 ------ARAEEFFREMGLS-GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
++A ++F + G+++++ + +++G C+ V++A ++ M +KG P+
Sbjct: 316 CKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPD 375
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
+ L+ + V EAL L+ ++V+ G+ +Y L+ GL ++++A
Sbjct: 376 RTAYTSLMDGNFKQGNVLEAL-ALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFL 434
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
EM+G+G P + + + + + G + A L+ + ++Q+ D
Sbjct: 435 EEMIGEGIHPDEVLCISVLKKHYELGCINEAVELQSYLMKHQLLTSD 481
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
DV + ++C GF + L L D V EA+ +++ +F +FP +S
Sbjct: 9 DVFDVLWSTRNVCVPGF----GVFDALFSVLIDLGMVEEAIQCF-SKMKRFRVFPKTRSC 63
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
L+ + GK + + +M+G G +P++ Y+ ID KEG+VE A L +EM
Sbjct: 64 NGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEM 121
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 85/215 (39%), Gaps = 20/215 (9%)
Query: 176 KIETCVDIVRM---LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
KI D R+ ++ G+ V T ALI + + G + E+ LD
Sbjct: 247 KIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELD------ 300
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAV 291
++ V TF L+ G + K D + ++ G + + Y+ ++
Sbjct: 301 ----------IKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDG 350
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+ ++ A L+E+M K + D AY +++ G + G + A +M +G++
Sbjct: 351 LCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLD 410
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
+ + LV G + A +M +G P+
Sbjct: 411 LLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 445
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 1/247 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN ++ L+ G+ +GA V D+ M R G + ++++L+ + + + +A
Sbjct: 337 KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMT 396
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ EMR + DVV+Y+T+I C+ G + A F +M G+ + ++F L++G C
Sbjct: 397 AFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLC 456
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G+ + +M +G P+ + ++ LC + RV EA D V+ G+ P
Sbjct: 457 SIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDM-VIHIGVKPDV 515
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
SY LI G C GKM+E++K MV G P Y++ ++GY K G VE A L +E
Sbjct: 516 VSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYRE 575
Query: 484 MFENQVR 490
MF V+
Sbjct: 576 MFRKDVK 582
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 121/240 (50%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV ++N ++ GF++EG +K ++ EM G PD +Y+ L+ C+ + M +A +
Sbjct: 198 PNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAI 257
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M DK V D YN +I G+C +G++ A ++M SG++ VT+ L+ YC+
Sbjct: 258 LQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCK 317
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G A V++ M RKG +P + +L+ K + + D+L +++ G+ +
Sbjct: 318 IGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDL-MIRDGIPFEHR 376
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI + G +++A+ EM G P + YS I K G VE A +M
Sbjct: 377 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQM 436
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 117/228 (51%), Gaps = 5/228 (2%)
Query: 249 TFNALMVGFYREGAFEKVED-VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
T N L+ G + D V+ M LG PD +SY+ L+ C E++ +EA +L
Sbjct: 128 TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIH 187
Query: 308 MRDK---NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M N +VV+YNT+I GF + GE+ +A F EM G+ VT+ L++G C+
Sbjct: 188 MTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCK 247
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A +D A+ + M KG P+ T ++I C ++ EA+ +LK ++ GL P
Sbjct: 248 AQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLK-KMSGSGLQPDVV 306
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+Y LI+ C+ G+ EA V MV KG +P+ IY + GY +G
Sbjct: 307 TYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKG 354
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 128/240 (53%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ +F +L+ G G ++KVE++ EM G PD + +M C+E R+ EA+
Sbjct: 443 PNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDF 502
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ + V+ DVV+YNT+I G+C +G+M + + M G+ S T+ L+NGY +
Sbjct: 503 FDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFK 562
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G V+ A+ +Y +M RK + T +++ L R+ A + L ++V G +
Sbjct: 563 NGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARE-LYMKMVDRGTQLRIE 621
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y ++ GLCE ++EAL++ ++ K FE + +S I+ +K G ++ A L M
Sbjct: 622 TYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAM 681
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 117/251 (46%), Gaps = 4/251 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG---CEPDCYSYSVLMAVFCEERRMREA 301
P+V ++NAL+ G E ++ ++ + M G C P+ SY+ ++ F +E + +A
Sbjct: 160 PDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKA 219
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L+ EM + + DVV YN++I G C+ M +A + M GV + T+ ++ G
Sbjct: 220 YFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRG 279
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC G ++ A+ + M G +P+ T +LI C R EA + + V K G P
Sbjct: 280 YCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRK-GQKP 338
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y L+ G +G + + + M+ G ++ I Y K G V+ A
Sbjct: 339 NSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAF 398
Query: 482 KEMFENQVRQE 492
EM +N +R +
Sbjct: 399 TEMRQNGLRPD 409
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 17/288 (5%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+M +GL V T N+LI + + + + I + +F V P+
Sbjct: 226 MMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKG----------------VMPD 269
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
T+N ++ G+ G E+ + +M+ G +PD +YS+L+ +C+ R EA +++
Sbjct: 270 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFD 329
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M K + + Y+ ++ G+ G + + M G+ F L+ Y + G
Sbjct: 330 SMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHG 389
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
VD A+ + +M + G P+ + +I LC RV +A+ ++V GL P S+
Sbjct: 390 AVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFN-QMVSEGLSPNIISF 448
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
LI GLC G+ ++ ++ EM+ +G P + +D KEG V
Sbjct: 449 TSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 496
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 115/237 (48%), Gaps = 1/237 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ V+P+V ++N L+ G+ G ++ M +G PD ++Y+ L+ + + R+ +
Sbjct: 509 IGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVED 568
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L+ EM K+V+ + N ++ G + G + A E + +M G + T+ ++
Sbjct: 569 ALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLG 628
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C VD A+ ++ D+ K FE + T ++I L R+ EA + A V++ G
Sbjct: 629 GLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLR-GPV 687
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P +Y +IK EEG +EE+ + M G + + + +++G+V A
Sbjct: 688 PDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRA 744
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 10/196 (5%)
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE-------MARAEEFFREMGLSGVESSS 352
+A L++E+ + V A+N+++ A A F M SGV +
Sbjct: 32 DALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMMA 91
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
L+ +C G +D A + + G+ + T+ LI LCD R +A+D++
Sbjct: 92 AIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFR 151
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG---FEPSLEIYSAFIDGYM 469
R+ + G P SY LIKGLC E K +EAL++ M G P++ Y+ IDG+
Sbjct: 152 RMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFF 211
Query: 470 KEGNVEMATMLRKEMF 485
KEG V+ A L EM
Sbjct: 212 KEGEVDKAYFLFHEMM 227
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 3/192 (1%)
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L+ M V +I FC +G + A F +G +VT L+
Sbjct: 75 AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134
Query: 361 GYCRAGDVDSAI-LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
G C D A+ +V+ M G+ P+ + LI LC +++ EAL++L G
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194
Query: 420 --FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P SY +I G +EG++++A + EM+G+G P + Y++ IDG K ++ A
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254
Query: 478 TMLRKEMFENQV 489
+ + MF+ V
Sbjct: 255 VAILQHMFDKGV 266
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 123/287 (42%), Gaps = 26/287 (9%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ K++ + + ++S GL T N+L+ + V +YRE+F
Sbjct: 528 VGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMF---------- 577
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
KDVK T N ++ G ++ G +++++M G + +Y+ ++ C
Sbjct: 578 RKDVKFCAI------TSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLC 631
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
E + EA +++E++R K E DV ++ +I ++G + A+ F M L G +
Sbjct: 632 ENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVI 691
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ ++ + G ++ + ++ M + G + + +++ RR+ E D+ +A
Sbjct: 692 TYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIV------RRLLEKGDVRRAG 745
Query: 414 VVKFGL----FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+ F E S L+ + E K ++ +K E +P
Sbjct: 746 TYLTKIDEKNFSLEASTAALLIPIVSEKKYQKEVKFLPEKYHSFMQP 792
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 118/244 (48%), Gaps = 1/244 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+VHT+ ++ G + G ++ +M GC+PD +YS ++ C++RR+ EA
Sbjct: 7 QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ M+ K + ++ YN++I G C A EM + + VTF L+N +C
Sbjct: 67 IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 126
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G+V A V M G EP T L+ + VFEA + + K G P
Sbjct: 127 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITK-GCKPDV 185
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
SY LI G C+ ++ EA ++ EM+ +G P + Y+ IDG + G + A L K
Sbjct: 186 FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 245
Query: 484 MFEN 487
M N
Sbjct: 246 MLTN 249
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 126/243 (51%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN+ T+N+L+ G + + + EM L P+ ++S+L+ +FC+E + EA
Sbjct: 76 ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEAR 135
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M + VE +VV Y++++ G+ E+ A + F M G + ++ L+NGY
Sbjct: 136 GVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGY 195
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A + A ++N+M +G P+ + LI LC R+ EA D+ K + G P
Sbjct: 196 CKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTN-GNLPD 254
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G C++G + +A ++ M +P++ +Y+ ID K N++ A L
Sbjct: 255 LCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFS 314
Query: 483 EMF 485
E+F
Sbjct: 315 ELF 317
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 145/289 (50%), Gaps = 17/289 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++ +DI + ++G+S + T N+LI +G + + +RE + ++ +
Sbjct: 60 RVNEALDIFSYMKAKGISPNIFTYNSLI------QG-LCNFSRWREASAMLNEMMS---- 108
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ + PN+ TF+ L+ F +EG + V M +G EP+ +YS LM + +
Sbjct: 109 -----LNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQ 163
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ EA KL++ M K + DV +YN +I G+C+ + A++ F EM G+ V++
Sbjct: 164 AEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSY 223
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C+ G + A ++ +M G P+ T +L+ C + + +A + +A
Sbjct: 224 NTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS 283
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+ L P Y LI +C+ ++EA K+ +E+ +G +P+++ + F
Sbjct: 284 TY-LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKLF 331
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 1/212 (0%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M G +PD ++Y+ ++ C+ A L+++M + + DVV Y+TII C+
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A + F M G+ + T+ L+ G C A + N+M P T +
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI C + VFEA +LK + + G+ P +Y L+ G + ++ EA K+ M+ K
Sbjct: 121 LINIFCKEGNVFEARGVLKT-MTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITK 179
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G +P + Y+ I+GY K + A L EM
Sbjct: 180 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEM 211
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 120/240 (50%), Gaps = 11/240 (4%)
Query: 245 PNVH---TFNALMVGFYREGA--FEKVEDVWVEMAR---LGCEPDCYSYSVLMAVFCEER 296
P+V ++N ++ R G + + V+M+R P+ SY+ +M C R
Sbjct: 78 PDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASR 137
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
R EA L M+ V DVV Y T+I G C+ E+ A E EM SGV+ + V +
Sbjct: 138 RTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYS 197
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L+ GYCR+G V+ DM R+G +P+ LI +LC + + +A + K +V+
Sbjct: 198 CLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKV-KDMMVQ 256
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
GL P +Y LI LC+EG + EAL ++ EM KG P + Y+ I G G +EM
Sbjct: 257 RGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGL--SGVLEM 314
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 122/247 (49%), Gaps = 10/247 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+N L+ +EG+ + + EM G PD +Y+ L+A M EA
Sbjct: 261 PNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSF 320
Query: 305 WEEM--RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
EEM D VE DVV +N++I G C+IG M +A + M G + VT+ +L+ G+
Sbjct: 321 LEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGF 380
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG---ELCDKRRVFEALDILKARVVKFGL 419
R V A+ + +++ G EP+ T +LI ++ + R + L ++ R +K L
Sbjct: 381 LRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAEL 440
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
F Y+ L+ +C++G ME A+ + EM K YS I G K G+++
Sbjct: 441 F----HYIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQ 495
Query: 480 LRKEMFE 486
L ++M +
Sbjct: 496 LIQDMLD 502
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 122/243 (50%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VR +V T+ L+ G + ++ EM G +P+ YS L+ +C R ++
Sbjct: 154 VRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVG 213
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++E+M + ++ DV+ + +I C+ G+ +A + M G+E + VT+ L+N
Sbjct: 214 KVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSL 273
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF-P 421
C+ G V A+ + +M KG P+ T LI L + EA+ L+ + + P
Sbjct: 274 CKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEP 333
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
++ +I GLC+ G+M +A+KV+ M +G +L Y+ I G+++ V+MA L
Sbjct: 334 DVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLM 393
Query: 482 KEM 484
E+
Sbjct: 394 DEL 396
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 146/313 (46%), Gaps = 24/313 (7%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
V ++R + + G+ V T LI +G+ E+ + LD +G
Sbjct: 143 VALLRSMQASGVRADVVTYGTLI------RGLCDASELDAALELLDEMCGSG-------- 188
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V+PNV ++ L+ G+ R G ++ V V+ +M+R G +PD ++ L+ C+E + +
Sbjct: 189 --VQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGK 246
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A K+ + M + +E +VV YN +I C+ G + A +EM GV VT+ L+
Sbjct: 247 AAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIA 306
Query: 361 GYCRAGDVDSAILVYNDMCRKG--FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
G ++D A+ +M + EP+ T +I LC R+ +A+ + + + + G
Sbjct: 307 GLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKV-REMMAERG 365
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+Y +LI G K++ A+ + E+ G EP YS I+G+ K V+
Sbjct: 366 CMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVD--- 422
Query: 479 MLRKEMFENQVRQ 491
R E F +RQ
Sbjct: 423 --RAEKFLCTMRQ 433
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 117/247 (47%), Gaps = 2/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V TFN+++ G + G + V MA GC + +Y+ L+ F +++ A
Sbjct: 331 VEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAM 390
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +E+ +E D Y+ +I GF ++ E+ RAE+F M G+++ + L+
Sbjct: 391 NLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAM 450
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G ++ A+ ++N+M K + +I C K + + L ++ GL P
Sbjct: 451 CQQGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGAC-KSGDMKTVKQLIQDMLDEGLAPD 508
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI + G +EEA +V +M GF P + ++ + I GY EG + L
Sbjct: 509 AVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIH 568
Query: 483 EMFENQV 489
EM V
Sbjct: 569 EMRAKNV 575
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 6/216 (2%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ T+N L+ GF R + ++ E+A G EPD ++YS+L+ F + + AEK
Sbjct: 369 NLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFL 428
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS-GVESSSVTFEHLVNGYCR 364
MR + ++ ++ Y ++ C+ G M RA F EM + G+++ + + +++G C+
Sbjct: 429 CTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDA--IAYSTMIHGACK 486
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+GD+ + + DM +G P+ T +LI + EA +LK ++ G P
Sbjct: 487 SGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLK-QMTASGFVPDVA 545
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGK--GFEPSL 458
+ LIKG EG+ ++ LK+ EM K F+P +
Sbjct: 546 VFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKI 581
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ + + L+ ++G E+ ++ EM + C D +YS ++ C+ M+ +
Sbjct: 436 IKAELFHYIPLLAAMCQQGMMERAMGLFNEMDK-NCGLDAIAYSTMIHGACKSGDMKTVK 494
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L ++M D+ + D V Y+ +I + ++G++ AE ++M SG F+ L+ GY
Sbjct: 495 QLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGY 554
Query: 363 CRAGDVDSAILVYNDMCRK--GFEPE 386
G D + + ++M K F+P+
Sbjct: 555 SAEGQTDKVLKLIHEMRAKNVAFDPK 580
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 231 AGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+G K VK++++ + P+ T++ L+ + + G E+ E V +M G PD
Sbjct: 487 SGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAV 546
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ L+ + E + + KL EMR KNV D +TII
Sbjct: 547 FDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 1/246 (0%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
++ ++PN+ T+N L+ G + GA EK + + EM G P ++ ++ + RR+
Sbjct: 616 KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRL 675
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+ E M + + D+ YNT++ C G +A EM SG+ ++TF L
Sbjct: 676 DVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+ G+C++ +D+A Y M + P +T L+G L R+ EA +L + K G
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL-IEMEKSG 794
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
L P +Y L G ++ EA+++ EMVGKGF P + Y+A I + K G + A
Sbjct: 795 LEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAK 854
Query: 479 MLRKEM 484
L K+M
Sbjct: 855 ELFKDM 860
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 182/396 (45%), Gaps = 41/396 (10%)
Query: 108 YATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKC 167
Y T++ RA + AR V+ + ++ DP V TY PF+ +
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDM-MKEAGVDPN-------VATY-----TPFI----VYY 249
Query: 168 CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG--- 224
C + +E D+ ++ G+ + V T +AL+ + R Y ++RE+
Sbjct: 250 C----RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGA 305
Query: 225 ----------LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVED 268
+DS A AG GK++ ++ V ++ T+ ALM ++G ++V+D
Sbjct: 306 APNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKD 365
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
P+ +Y+VL+ C+ + EAE++ EM +K++ +VV ++++I GF
Sbjct: 366 TLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFV 425
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ G + +A E+ R M G+ + VT+ L++G+ + D+A+ VY+DM +G +
Sbjct: 426 KRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKF 485
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
++ L+ L ++ EA+ + K GL +Y LI GL + G M A K E
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFK-DASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQE 544
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ + P +Y+ FI+ G + A EM
Sbjct: 545 LMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 116/244 (47%), Gaps = 1/244 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V +N L+ GF R G + V M G +P+ +Y+ + +C + + EA L+
Sbjct: 203 DVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLY 262
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E M V DVV + ++ G C G + A FREM G + VT+ L++ +A
Sbjct: 263 EGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKA 322
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + + +M +G + T L+ L + + E D L+ + L P +
Sbjct: 323 GRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSD-NLSPNGVT 381
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI LC+ ++EA +V EM K P++ +S+ I+G++K G ++ AT ++ M
Sbjct: 382 YTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMK 441
Query: 486 ENQV 489
E +
Sbjct: 442 ERGI 445
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 141/333 (42%), Gaps = 22/333 (6%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV---------FGLDS 227
++ + RM+ RG++ V T LI + +G + E+Y ++ F +DS
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS 489
Query: 228 -----------DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+ + KD +V+ + L+ G ++ G E+
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVN-YTTLIDGLFKAGDMPTAFKFGQELMDR 548
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
PD Y+V + C + +EA+ EMR+ ++ D YNT+I C GE A+A
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ EM +S ++ + +T+ LV G G V+ A + N+M GF P T ++
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
RR+ LDI ++ GL Y L++ LC G +A V EM+G G P
Sbjct: 669 CSQSRRLDVILDI-HEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAP 727
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++A I G+ K +++ A +M +
Sbjct: 728 DTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ ++ +N L+ G K V EM G PD +++ L+ C+ + A
Sbjct: 690 LHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAF 749
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +M +N+ ++ +NT++GG +G + A EM SG+E +++T++ L G+
Sbjct: 750 ATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGH 809
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ + A+ +Y +M KGF P+ ST LI + + +A ++ K + K G+ PT
Sbjct: 810 GKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFK-DMQKRGVHPT 868
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G E K +M KGF PS S + K G A L K
Sbjct: 869 SCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLK 928
Query: 483 EMF 485
++
Sbjct: 929 NLY 931
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 123/316 (38%), Gaps = 17/316 (5%)
Query: 155 GSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVIS 214
G P++ L++ + + + ++GL + V N L+ R V
Sbjct: 163 GITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQV-- 220
Query: 215 GYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
DA G+ D+ + V PNV T+ +V + R E+ D++ M
Sbjct: 221 -------------DAARGV-LDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMV 266
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
R G D + S L+A C + R EA L+ EM + V Y T+I + G
Sbjct: 267 RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGK 326
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
EM GV VT+ L++ + G D P G T VLI
Sbjct: 327 ELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLI 386
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
LC V EA +L K + P ++ +I G + G +++A + + M +G
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEK-SISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGI 445
Query: 455 EPSLEIYSAFIDGYMK 470
P++ Y IDG+ K
Sbjct: 446 NPNVVTYGTLIDGFFK 461
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 84/213 (39%), Gaps = 18/213 (8%)
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D S + L+ C R +R A L R VAYN ++ + + A A
Sbjct: 72 DPASLNALLYSHCRLRLLRPAIALLRSSRPT-----TVAYNILLAA---LSDHAHAPAVL 123
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP---EGSTIEVL-IGE 396
EM GV VT L+ G CR G VD+A + G P T+ +L I
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALA--DRAGGITPWMSSAGTLSLLDIAG 181
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
D D + A+ GL Y L+ G C G+++ A V M G +P
Sbjct: 182 FGDTPAALSVADRMTAQ----GLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP 237
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ Y+ FI Y + VE A L + M N V
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGV 270
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 122/246 (49%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V ++ ++ G+ +G + D++ M G PD Y+++VL+ + + +A +
Sbjct: 359 PDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMII 418
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EMRD V+ VV Y T+I C IG+M A E F +M GV + L+ G+C
Sbjct: 419 FNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCT 478
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A + +++ G + +I LC RV +A +I V GL P
Sbjct: 479 HGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDL-TVNVGLHPDAV 537
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y L+ G C GKME+AL+V MV G EP++ Y ++GY K G ++ L +EM
Sbjct: 538 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597
Query: 485 FENQVR 490
+ ++
Sbjct: 598 LQKGIK 603
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 126/247 (51%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+++TFN L+ + G +K ++ EM G +P +Y ++A C +M +A
Sbjct: 392 IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAM 451
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + +M D+ V D AY+ +I GFC G + +A+E E+ +G+ V F ++N
Sbjct: 452 EKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNL 511
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G V A +++ G P+ +L+ C ++ +AL + A +V G+ P
Sbjct: 512 CKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA-MVSAGIEPN 570
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y L+ G C+ G+++E L + EM+ KG +PS +Y+ IDG + G A +
Sbjct: 571 VVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 630
Query: 483 EMFENQV 489
EM E+ +
Sbjct: 631 EMTESGI 637
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 125/248 (50%), Gaps = 3/248 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG--CEPDCYSYSVLMAVFCEERRMREAE 302
P+V ++N L+ +G + +D+ MA G C PD +Y+ ++ F +E + +A
Sbjct: 182 PDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKAC 241
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++EM + + D+V Y++++ C+ M +AE F R+M GV + T+ +L+ GY
Sbjct: 242 DLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGY 301
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G A+ V+ +M R+ P+ + L+G LC ++ EA D+ +K G P
Sbjct: 302 SSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMK-GQNPD 360
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY ++ G +G + + + M+G G P + ++ I Y G ++ A ++
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFN 420
Query: 483 EMFENQVR 490
EM ++ V+
Sbjct: 421 EMRDHGVK 428
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 131/283 (46%), Gaps = 36/283 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM------ 298
P+V +N ++ GF++EG K D++ EM + G PD +YS ++ C+ R M
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAF 278
Query: 299 -----------------------------REAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+EA ++++EMR +++ DVVA NT++G C+
Sbjct: 279 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G++ A + F M + G ++ ++NGY G + +++ M G P+ T
Sbjct: 339 YGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 398
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
VLI + + +A+ I + G+ P +YM +I LC GKM++A++ +M
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFN-EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ +G P Y I G+ G++ A L E+ N +R +
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLD 500
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 203/469 (43%), Gaps = 52/469 (11%)
Query: 30 SSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIAL----GLKNNP 85
+ P S + A V+L S+++ +LS PT ++ L + P
Sbjct: 77 ARAPSSAACGSGPALAVALFNRAASRAQGPRVLS-------PTSYTYAILMDCCTRAHRP 129
Query: 86 HLALRFFS------------FTQH--KSLCKHSLSSYATIIHILSRARLIGPARDVI--R 129
LAL FF H K C+ + A I +L R +G DV
Sbjct: 130 ELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI-LLHRTPELGCVPDVFSYN 188
Query: 130 VALRSPENDPKLKLFEVLVKTYRECGS--APFV--FDLLIKCCLEVKNIEKIETCVDIVR 185
+ L+S N K + L++ E G+ +P V ++ +I + ++ K D+ +
Sbjct: 189 ILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNK---ACDLFK 245
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
++ RG+ + T ++++ + + + + R++ + K V P
Sbjct: 246 EMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQM----------VNKGV------LP 289
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+ T+N L+ G+ G +++ V+ EM R PD + + LM C+ +++EA ++
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M K DV +Y ++ G+ G + + F M G+ TF L+ Y
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC 409
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G +D A++++N+M G +P T +I LC ++ +A++ +++ G+ P + +
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFN-QMIDQGVVPDKYA 468
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
Y LI+G C G + +A ++ +E++ G + + + I+ K G V
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 156/370 (42%), Gaps = 35/370 (9%)
Query: 139 PKLKLFEVLVKTYRECG---SAPFVFDLL------------IKCCLEVKNIEKIETCVDI 183
P + F VL+K Y CG A +F+ + + + I K++ ++
Sbjct: 394 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV-----------FGLDSDATAG 232
++ +G+ + LI ++ E+ E+ FG +
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513
Query: 233 IGK--------DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+G+ D+ V + P+ +N LM G+ G EK V+ M G EP+
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y L+ +C+ R+ E L+ EM K ++ + YN II G E G A+ F EM
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 633
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
SG+ + T+ ++ G + D AI ++ ++ + + T+ +I + RRV
Sbjct: 634 ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVE 693
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
EA D+ A + + GL P +Y +I L +EG +EEA + + M G EP + +
Sbjct: 694 EAKDLF-ASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHV 752
Query: 465 IDGYMKEGNV 474
+ +K+ +
Sbjct: 753 VRELLKKNEI 762
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 135/309 (43%), Gaps = 17/309 (5%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
D+ +++ G++ + T N LI + + I+ E+ R
Sbjct: 382 DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM----------------RDH 425
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
V+P+V T+ ++ R G + + + +M G PD Y+Y L+ FC + +A
Sbjct: 426 GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA 485
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++L E+ + + D+V + +II C++G + A+ F G+ +V + L++G
Sbjct: 486 KELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDG 545
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC G ++ A+ V++ M G EP L+ C R+ E L + + + K G+ P
Sbjct: 546 YCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQK-GIKP 604
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ Y +I GL E G+ A EM G + YS + G K + A L
Sbjct: 605 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLF 664
Query: 482 KEMFENQVR 490
KE+ V+
Sbjct: 665 KELRAMNVK 673
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ + ++ L+ GF G+ K +++ E+ G D + ++ C+ R+ +A+
Sbjct: 462 VVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQ 521
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ + + D V YN ++ G+C +G+M +A F M +G+E + V + LVNGY
Sbjct: 522 NIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 581
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE-------------ALDI 409
C+ G +D + ++ +M +KG +P ++I L + R A++
Sbjct: 582 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 641
Query: 410 LKARVVKFGLFPT----EKSYMF-----------------LIKGLCEEGKMEEALKVQAE 448
+V GLF E ++F +I G+ + ++EEA + A
Sbjct: 642 CTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 701
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ G P YS I +KEG VE A
Sbjct: 702 ISRSGLVPCAVTYSIMITNLLKEGLVEEA 730
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
R G + +S T+ L++ RA + A+ + + R G + L+ C+
Sbjct: 102 RAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEA 161
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA---LKVQAEMVGKGFEPS 457
+R EALDIL R + G P SY L+K LC +GK +A L++ AE G P
Sbjct: 162 KRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG-GTVCSPD 220
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ Y+ IDG+ KEG+V A L KEM + +
Sbjct: 221 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI 252
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 74/168 (44%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T++ ++ G ++ F++ ++ E+ + + D + + ++A + RR+ EA+ L+
Sbjct: 640 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ + V Y+ +I + G + AE+ F M +G E S H+V +
Sbjct: 700 ASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKK 759
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
++ A + + + F E T +L+ K E + L A+
Sbjct: 760 NEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPAK 807
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 127/245 (51%), Gaps = 2/245 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V N ++ G + +K ++++EM +GCEP SY+ +++ +M EA K
Sbjct: 18 PDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKF 77
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M D E DV+A+ T+I GFC+ G+ + L + +++GYC+
Sbjct: 78 FNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKRFRPDVFLYTSVIHGYCK 136
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AGD+D+ + +M G P+ + VLI LC RV EA ++ + R+ K G
Sbjct: 137 AGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFE-RMRKSGCLGDYV 195
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++M LI+ L GK++EA ++ EM+ +G+EP LE+ + I K G V+ A + + +
Sbjct: 196 TFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTV 255
Query: 485 FENQV 489
+V
Sbjct: 256 VAKKV 260
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 111/240 (46%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + F +L+ + +G E+ V EM GC PD Y+ L+ + R+ EA +
Sbjct: 536 PGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHV 595
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ M +K D + Y TII F +IG + A E M SGV + L++GY +
Sbjct: 596 FDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVK 655
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
VD A VY+ M G +P T VL+ L + A + K + K + PT
Sbjct: 656 LERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLV 715
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
SY LI GL + G++ EA EM+ +G P Y++ I K G + A L ++M
Sbjct: 716 SYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDM 775
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 152/355 (42%), Gaps = 23/355 (6%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
D LKL +V EC + P + +++L+ +++ +++ ++L S G
Sbjct: 281 DDGLKLLLQMV----ECDNFPDIQTYNILVA---GFSRANRLDDALELFKLLSSYGCKPN 333
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG-KDVKRV------------VR 242
+T +I + + + + E + S T G D KR+
Sbjct: 334 AATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAG 393
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PNV + A++ G + G E + +M+ C P +Y+V++ C+ + + +A
Sbjct: 394 CSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDAC 453
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++E+M K D + Y T+I GF + +M A + M G E ++VT+ +V+G+
Sbjct: 454 KVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGF 513
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ ++ A V M +G EP L+ K R EA +L + G P
Sbjct: 514 CKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTAR-GCAPD 572
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
Y LI L G++ EA V M+ KG P Y I + K GNVE A
Sbjct: 573 VILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAA 627
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 168/389 (43%), Gaps = 40/389 (10%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+Y +I+H + +I A++VI +R +P L +F L+ Y G A + +L +
Sbjct: 505 TYGSIVHGFCKLDMINEAKEVI-AQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTE 563
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
+ +RG + V +LI + V R VF D
Sbjct: 564 --------------------MTARGCAPDVILYTSLIDLLFSTGRVPEA----RHVF--D 597
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
S G P+ T+ ++ F + G E ++ MA+ G PDC++Y+
Sbjct: 598 SMIEKGCA----------PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYN 647
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-GL 345
LM + + R+ +A +++ M ++ + V +N ++ G + G+ RA F+EM
Sbjct: 648 SLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEK 707
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
V + V++ L++G +AG V A + +M +G PE T LI L R+ E
Sbjct: 708 DEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPE 767
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
A +++ +VK G+ P ++Y LI GL + ++ A V EM+ +G P+ Y
Sbjct: 768 AKKLVE-DMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLR 826
Query: 466 DGYMKEGNVEMATMLRKEMFENQVRQEDG 494
G+ G + K+ F V E G
Sbjct: 827 RGFRAAGRA-LDLEAVKQHFSQGVAMEAG 854
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 112/245 (45%), Gaps = 1/245 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R RP+V + +++ G+ + G + + EM GC PD +Y VL+ C+ R+ EA
Sbjct: 119 RFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L+E MR D V + T+I G++ A E +REM G E + L+
Sbjct: 179 YELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFA 238
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+AG VD A +Y + K L+ C RV + L +L ++V+ FP
Sbjct: 239 LCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLL-LQMVECDNFP 297
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
++Y L+ G ++++AL++ + G +P+ Y+ I G +E A
Sbjct: 298 DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF 357
Query: 482 KEMFE 486
E +
Sbjct: 358 DEALD 362
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 158/362 (43%), Gaps = 51/362 (14%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
D +LFE + K+ C F LI+ + N K++ ++ R ++ RG +
Sbjct: 176 DEAYELFERMRKS--GCLGDYVTFMTLIEA---LSNHGKLDEACELYREMIERGYEPYLE 230
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
++LI+ + + V EIY+ V K+V R +N+LM G+
Sbjct: 231 VQDSLIFALCKAGKVDEANEIYQTVVA-------------KKVATSRV---AYNSLMDGY 274
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA---------------- 301
+ G + + ++M PD +Y++L+A F R+ +A
Sbjct: 275 CKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNA 334
Query: 302 -------EKLWEEMRDKNVEH------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ L++ R + + DV++Y T+I G + + A E F ++ +G
Sbjct: 335 ATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGC 394
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+ V + +++G +AG ++ + + DM P +T V+I LC + + +A
Sbjct: 395 SPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACK 454
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+ + ++V+ G P +Y LI G + KM+EA K+ M+ KG EP+ Y + + G+
Sbjct: 455 VFE-QMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGF 513
Query: 469 MK 470
K
Sbjct: 514 CK 515
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 81/187 (43%), Gaps = 2/187 (1%)
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
M EA +EM + DVV N ++ G C+ ++ +A E F EM G E + V++
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
+++G +D A +N M G EP+ LI C + +L + +F
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P Y +I G C+ G ++ K+ EM+ G P Y ID K G V+ A
Sbjct: 121 R--PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178
Query: 478 TMLRKEM 484
L + M
Sbjct: 179 YELFERM 185
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 152/326 (46%), Gaps = 20/326 (6%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATA------- 231
V ++ L +RG ++ V CN ++ + V + R++ FG + D +
Sbjct: 177 VRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKG 236
Query: 232 --------GIGKDVKRVVRVR--PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
+ + ++ +VR+ PN+ TFN L+ R G FE+V +V +M GC PD
Sbjct: 237 LCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPD 296
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
Y+ ++ C+E + A ++ M ++ +VV YNT++ G C EE
Sbjct: 297 IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM VTF LV+ +C+ G VD I + M +G P+ T +I C +
Sbjct: 357 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEG 416
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ EA+ +LK+ + G P SY ++KGLC + +A + ++M+ +G + +
Sbjct: 417 LIDEAVMLLKS-MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 475
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFEN 487
+ I+ K+G VE A L K+M N
Sbjct: 476 NTLINFLCKKGLVEQAIELLKQMLVN 501
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 145/327 (44%), Gaps = 20/327 (6%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD---SDATAGI 233
+E +I+ + S GL V N L+ + + E+ E+F D D T I
Sbjct: 313 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 372
Query: 234 GKD-------VKRVVRV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
D V RV+ + P+V T+ ++ GF +EG ++ + M G
Sbjct: 373 LVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C+P+ SY++++ C R +AE L +M + + + +NT+I C+ G + +A
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 492
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
E ++M ++G +++ +++G +AG D A+ + N M KG P + L
Sbjct: 493 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+ R+ + + + + + Y +I LC+ G+ E A++ A MV G P+
Sbjct: 553 SREGRINKVIQMFD-NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 611
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ I G EG V+ A + E+
Sbjct: 612 ESTYTILIRGLASEGFVKEAQEMLTEL 638
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 109/253 (43%), Gaps = 1/253 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V PN +T+ ++ G V EM R GC P Y V++ C R
Sbjct: 116 VPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRS 175
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A ++ E++ + DV N ++ C+ G + A R++ G E V++ ++
Sbjct: 176 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLK 235
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C A + +M R P T LI LC + +FE + + A++V+ G
Sbjct: 236 GLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLC-RNGLFERVHEVLAQMVEHGCT 294
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P + Y +I G+C+EG +E A ++ M G +P++ Y+ + G E L
Sbjct: 295 PDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 354
Query: 481 RKEMFENQVRQED 493
EMF+ +D
Sbjct: 355 LAEMFDKDCPLDD 367
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 105/239 (43%), Gaps = 21/239 (8%)
Query: 146 VLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
+L+K+ CG P + +++K + + E+ D++ ++ +G + T N LI
Sbjct: 423 MLLKSMTACGCKPNTISYTIVLK---GLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLI 479
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
+ + V E+ +++ V P++ +++ ++ G + G
Sbjct: 480 NFLCKKGLVEQAIELLKQML----------------VNGCSPDLISYSTVIDGLGKAGKT 523
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
++ ++ M G P+ YS + + E R+ + ++++ ++D + D V YN +
Sbjct: 524 DEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAV 583
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
I C+ GE RA EF M SG + T+ L+ G G V A + ++C KG
Sbjct: 584 ISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 83/232 (35%), Gaps = 68/232 (29%)
Query: 320 YNTIIGGFCEIGEM--------------------------------ARAEEFFREMGLSG 347
YN ++ G+C G++ A A EM G
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 152
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ ++ CR G SA+ V D+ +G + +++ +CD+ V EAL
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 212
Query: 408 DILKARVVKFGLFPTEKSYMFLIKG----------------------------------- 432
+L+ + FG P SY ++KG
Sbjct: 213 HLLR-DLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 271
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LC G E +V A+MV G P + +Y+ IDG KEG++E+A + M
Sbjct: 272 LCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRM 323
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 168/390 (43%), Gaps = 39/390 (10%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
K + +Y II L +AR + A V+R + + P + ++ Y G
Sbjct: 297 KPDVVTYNLIIDALCKARAMDKAELVLR-QMTTNGAQPDTVTYNCMIHGYATLG------ 349
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
+++ + R + SRGL + CN+ + + + EI+
Sbjct: 350 --------------RLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIF-- 393
Query: 222 VFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
D+ G +P++ ++ L+ G+ EG F + ++ M G D
Sbjct: 394 ------DSMTAKGH--------KPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAAD 439
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
C +++L+ + + + +A ++ EM+ + V DVV Y+T+I F +G + A E F
Sbjct: 440 CRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFN 499
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF-EPEGSTIEVLIGELCDK 400
+M G++ ++ + ++ G+C G + A + ++M KG P+ +I LC
Sbjct: 500 QMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKD 559
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
RV +A DI V G P ++ LI G C GKM++A K+ M G E +
Sbjct: 560 GRVMDAHDIFDL-VTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVT 618
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
YS +DGY K G + L +EM V+
Sbjct: 619 YSTLLDGYFKNGRINDGLTLFREMQRKGVK 648
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 34/283 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV +N ++ GF++EG K ++ EM R G +PD +Y++++ C+ R M +AE +
Sbjct: 263 PNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELV 322
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M + D V YN +I G+ +G + A + FR+M G+ + V + C+
Sbjct: 323 LRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCK 382
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFEAL----------- 407
G A +++ M KG +P+ + L+ G D +F ++
Sbjct: 383 HGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRV 442
Query: 408 -DILKARVVKFGLF----------------PTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+IL K G+ P +Y +I G++ +A++ +MV
Sbjct: 443 FNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMV 502
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+G +P+ +Y + I G+ G + A L EM + + D
Sbjct: 503 ARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPD 545
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 138/301 (45%), Gaps = 22/301 (7%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+++RG+ + +++I G++ E+ E+ I K + R P+
Sbjct: 501 MVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEM----------INKGIPR-----PD 545
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ FN+++ ++G D++ + +G PD +++ L+ +C +M +A K+ +
Sbjct: 546 IVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILD 605
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M VE D+V Y+T++ G+ + G + FREM GV+ ++VT+ ++ G RAG
Sbjct: 606 AMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
+A +++M G S +++G LC EA+ + + K G + S
Sbjct: 666 RTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQ----KLGTMNVKFSI 721
Query: 427 MFL---IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
L I + + + EEA ++ A + G P+ Y I +K+G VE A +
Sbjct: 722 TILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSS 781
Query: 484 M 484
M
Sbjct: 782 M 782
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 110/234 (47%), Gaps = 1/234 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RP+V TF +L+ G+ G +K + M +G E D +YS L+ + + R+ +
Sbjct: 578 RPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLT 637
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+ EM+ K V+ + V Y ++ G G A + F EM SG + + ++ G C
Sbjct: 638 LFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC 697
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R D AI+++ + + + + +I + +R EA ++ A + GL P E
Sbjct: 698 RNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELF-ATISASGLLPNE 756
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y +I L ++G +E+A + + M G P + + I +++G + A
Sbjct: 757 STYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKA 810
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 2/141 (1%)
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ L++ CRA D ++++ + R G + T L+ LC R EA+++L R
Sbjct: 159 TYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHR 218
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV--GKGFEPSLEIYSAFIDGYMKE 471
+ + G P SY ++KGLC+ + AL + M G P++ Y+ I G+ KE
Sbjct: 219 MSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKE 278
Query: 472 GNVEMATMLRKEMFENQVRQE 492
G A L EM V+ +
Sbjct: 279 GETGKACSLFHEMTRQGVKPD 299
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 41/246 (16%)
Query: 242 RVRP-NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
RV P VHT++ LM R + ++ + R G + + S L+ C R E
Sbjct: 151 RVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEE 210
Query: 301 A-EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS--VTFEH 357
A L M + +V +Y+ I+ G C+ RA + F+ M G S V +
Sbjct: 211 AVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNT 270
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
+++G+ + G+ A ++++M R+G +P+ T
Sbjct: 271 VIHGFFKEGETGKACSLFHEMTRQGVKPDVVT---------------------------- 302
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV-EM 476
Y +I LC+ M++A V +M G +P Y+ I GY G + E
Sbjct: 303 --------YNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEA 354
Query: 477 ATMLRK 482
A M RK
Sbjct: 355 AKMFRK 360
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 74/168 (44%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+PN T+ ++ G +R G + EM G Y +++ C EA
Sbjct: 647 VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI 706
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++++ NV+ + NT+I ++ A+E F + SG+ + T+ ++
Sbjct: 707 ILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINL 766
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ G V+ A +++ M + G P + +I L +K + +A + L
Sbjct: 767 LKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYL 814
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 1/246 (0%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
++ ++PN+ T+N L+ G + GA EK + + EM G P ++ ++ + RR+
Sbjct: 616 KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRL 675
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+ E M + + D+ YNT++ C G +A EM SG+ ++TF L
Sbjct: 676 DVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+ G+C++ +D+A Y M + P +T L+G L R+ EA +L + K G
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL-IEMEKSG 794
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
L P +Y L G ++ EA+++ EMVGKGF P + Y+A I + K G + A
Sbjct: 795 LEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAK 854
Query: 479 MLRKEM 484
L K+M
Sbjct: 855 ELFKDM 860
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 198/451 (43%), Gaps = 66/451 (14%)
Query: 58 WNHLLS-LCRSGLTPTQFS----QIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATII 112
WN L++ CR G TP S A GL + + Y T++
Sbjct: 172 WNTLIAGYCRVGDTPAALSVADRMTAQGLPMD--------------------VVGYNTLV 211
Query: 113 HILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVK 172
RA + AR V+ + ++ DP V TY PF+ + C
Sbjct: 212 AGFCRAGQVDAARGVLDM-MKEAGVDPN-------VATY-----TPFI----VYYC---- 250
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG-------- 224
+ +E D+ ++ G+ + V T +AL+ + R Y ++RE+
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310
Query: 225 -----LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
+DS A AG GK++ ++ V ++ T+ ALM ++G ++V+D
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
P+ +Y+VL+ C+ + EAE++ EM +K++ +VV ++++I GF + G +
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+A E+ R M G+ + VT+ L++G+ + D+A+ VY+DM +G + ++ L
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSL 490
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ L ++ EA+ + K GL +Y LI GL + G M A K E++ +
Sbjct: 491 VNGLRQNGKIEEAMALFK-DASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P +Y+ FI+ G + A EM
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 167/389 (42%), Gaps = 22/389 (5%)
Query: 106 SSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLI 165
+S +++ R RL+ PA ++R + P + +L+ + AP V +
Sbjct: 74 ASLNALLYSHCRLRLLRPAIALLR------SSRPTTVAYNILLAALSDHAHAPAVLAEMC 127
Query: 166 KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV----ISGYEIYRE 221
K + + T ++ L G +V AL RG G+ + G+
Sbjct: 128 KRGVPFDGV----TVNTLLAGLCRNG---QVDAAAAL---ADRGGGIHALDVIGWNTLIA 177
Query: 222 VFGLDSDATAGIGKDVKRVVRVRP-NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
+ D A + + + P +V +N L+ GF R G + V M G +P
Sbjct: 178 GYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP 237
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+ +Y+ + +C + + EA L+E M V DVV + ++ G C G + A F
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
REM G + VT+ L++ +AG + + +M +G + T L+ L +
Sbjct: 298 REMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQ 357
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+ E D L+ + L P +Y LI LC+ ++EA +V EM K P++
Sbjct: 358 GKTDEVKDTLRF-ALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVT 416
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+S+ I+G++K G ++ AT ++ M E +
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGI 445
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 141/333 (42%), Gaps = 22/333 (6%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV---------FGLDS 227
++ + RM+ RG++ V T LI + +G + E+Y ++ F +DS
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS 489
Query: 228 -----------DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+ + KD +V+ + L+ G ++ G E+
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVN-YTTLIDGLFKAGDMPTAFKFGQELMDR 548
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
PD Y+V + C + +EA+ EMR+ ++ D YNT+I C GE A+A
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ EM +S ++ + +T+ LV G G V+ A + N+M GF P T ++
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
RR+ LDI ++ GL Y L++ LC G +A V EM+G G P
Sbjct: 669 CSQSRRLDVILDI-HEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAP 727
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++A I G+ K +++ A +M +
Sbjct: 728 DTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ ++ +N L+ G K V EM G PD +++ L+ C+ + A
Sbjct: 690 LHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAF 749
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +M +N+ ++ +NT++GG +G + A EM SG+E +++T++ L G+
Sbjct: 750 ATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGH 809
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ + A+ +Y +M KGF P+ ST LI + + +A ++ K + K G+ PT
Sbjct: 810 GKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFK-DMQKRGVHPT 868
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G E K +M KGF PS S + K G A L K
Sbjct: 869 SCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLK 928
Query: 483 EMF 485
++
Sbjct: 929 NLY 931
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 84/211 (39%), Gaps = 14/211 (6%)
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D S + L+ C R +R A L R VAYN ++ + + A A
Sbjct: 72 DPASLNALLYSHCRLRLLRPAIALLRSSRPT-----TVAYNILLAA---LSDHAHAPAVL 123
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI--EVLIGELC 398
EM GV VT L+ G CR G VD+A + + R G I LI C
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD---RGGGIHALDVIGWNTLIAGYC 180
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
AL + R+ GL Y L+ G C G+++ A V M G +P++
Sbjct: 181 RVGDTPAALSVAD-RMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
Y+ FI Y + VE A L + M N V
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMVRNGV 270
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 130/247 (52%), Gaps = 1/247 (0%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T+N L+ + +G + ++ EM G PD ++Y++L+ C+E +++A +++E
Sbjct: 621 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 680
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M + V VV Y +I + G++ ++ F E G+ V + L+N + +G
Sbjct: 681 NMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 740
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++D A + +M +K P+ T L+ LC RV EA ++ + + G+ P +Y
Sbjct: 741 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID-EMTERGIQPDLVTY 799
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI G +G +++AL+++ EM+ KGF P+L Y+A I G K G + A + KEM E
Sbjct: 800 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 859
Query: 487 NQVRQED 493
N + +D
Sbjct: 860 NGITPDD 866
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 166/366 (45%), Gaps = 39/366 (10%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+Y T+I + + A V L E P+ ++ L+ Y + G
Sbjct: 552 TYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG----------- 600
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV-SRGKGVISGYEIYREVFGL 225
K++T + ++ RG+++ V+T N L+ + G+G YE+ E+ G
Sbjct: 601 ---------KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT-EAYELVEEMGG- 649
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
G+ P+V T+N L+ G +EG +K +++ M+R G +Y
Sbjct: 650 -----KGLA----------PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 694
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ L+ ++ +++E +KL++E + + D+V YN +I G + RA E EM
Sbjct: 695 TALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 754
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
+ VT+ L+ G C G VD A + ++M +G +P+ T LI K V +
Sbjct: 755 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKD 814
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
AL I + ++ G PT +Y LI+GLC+ G+ ++A + EMV G P Y + I
Sbjct: 815 ALRI-RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 873
Query: 466 DGYMKE 471
+G E
Sbjct: 874 EGLTTE 879
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 134/252 (53%), Gaps = 3/252 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEM-ARLGCEPDCYSYSVLMAVFCEERRMREAE 302
RPN T+N ++ GF G + D+ EM R G P+ Y+Y +++ +C+ R+ EA
Sbjct: 511 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 570
Query: 303 KLWEEMRDKN-VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+++EM K V+ + V YN +IGG+C+ G++ A + M GV + T+ LV+
Sbjct: 571 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 630
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
G A + +M KG P+ T +LI C + V +AL+I + + + G+
Sbjct: 631 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE-NMSRRGVRA 689
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
T +Y LI L ++G+++E K+ E V +G P L +Y+A I+ + GN++ A +
Sbjct: 690 TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 749
Query: 482 KEMFENQVRQED 493
EM + ++ +D
Sbjct: 750 GEMEKKRIAPDD 761
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 121/225 (53%), Gaps = 11/225 (4%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
++ +M RL ++++++ C + A +L +M N V YNT+I GFC
Sbjct: 470 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNA----VTYNTVIAGFC 525
Query: 329 EIGEMARAEEFFREM-GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG-FEPE 386
G + A + REM G+ + T+ +++G+C+ G VD A+ V+++M KG +PE
Sbjct: 526 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 585
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
LIG CD+ ++ AL + + R+V+ G+ T +Y L+ L +G+ EA ++
Sbjct: 586 AVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 644
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
EM GKG P + Y+ I+G+ KEGNV+ A E+FEN R+
Sbjct: 645 EEMGGKGLAPDVFTYNILINGHCKEGNVKKAL----EIFENMSRR 685
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P++ T+N L+ G+ +G + + EM G P +Y+ L+ C+ + +AE
Sbjct: 792 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 851
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+ +EM + + D Y ++I G E A +E
Sbjct: 852 NMVKEMVENGITPDDSTYISLIEGLTTEDERAIDDE 887
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 151/326 (46%), Gaps = 20/326 (6%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATA------- 231
V ++ L +RG ++ V CN ++ + V + R++ FG + D +
Sbjct: 214 VRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKG 273
Query: 232 --------GIGKDVKRVVRVR--PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
+ + ++ +VR+ PN+ TFN L+ R G FE+V +V +M GC PD
Sbjct: 274 LCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPD 333
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
Y+ ++ C+E + A ++ M ++ +VV YNT++ G C EE
Sbjct: 334 IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 393
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM VTF LV+ +C+ G VD I + M G P+ T +I C +
Sbjct: 394 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEG 453
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+ EA+ +LK+ + G P SY ++KGLC + +A + ++M+ +G + +
Sbjct: 454 LIDEAVMLLKS-MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 512
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFEN 487
+ I+ K+G VE A L K+M N
Sbjct: 513 NTLINFLCKKGLVEQAIELLKQMLVN 538
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 145/327 (44%), Gaps = 20/327 (6%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD---SDATAGI 233
+E +I+ + S GL V N L+ + + E+ E+F D D T I
Sbjct: 350 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 409
Query: 234 GKD-------VKRVVRV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
D V RV+ + P+V T+ ++ GF +EG ++ + M G
Sbjct: 410 LVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 469
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C+P+ SY++++ C R +AE L +M + + + +NT+I C+ G + +A
Sbjct: 470 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 529
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
E ++M ++G +++ +++G +AG D A+ + N M KG P + L
Sbjct: 530 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 589
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+ R+ + + + + + Y +I LC+ G+ E A++ A MV G P+
Sbjct: 590 SREGRINKVIQMFD-NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 648
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ I G EG V+ A + E+
Sbjct: 649 ESTYTILIRGLASEGFVKEAQEMLTEL 675
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 109/253 (43%), Gaps = 1/253 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V PN +T+ ++ G V EM R GC P Y V++ C R
Sbjct: 153 VPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRS 212
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A ++ E++ + DV N ++ C+ G + A R++ G E V++ ++
Sbjct: 213 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLK 272
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C A + +M R P T LI LC + +FE + + A++V+ G
Sbjct: 273 GLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLC-RNGLFERVHEVLAQMVEHGCT 331
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P + Y +I G+C+EG +E A ++ M G +P++ Y+ + G E L
Sbjct: 332 PDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 391
Query: 481 RKEMFENQVRQED 493
EMF+ +D
Sbjct: 392 LAEMFDKDCPLDD 404
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 105/239 (43%), Gaps = 21/239 (8%)
Query: 146 VLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
+L+K+ CG P + +++K + + E+ D++ ++ +G + T N LI
Sbjct: 460 MLLKSMTACGCKPNTISYTIVLK---GLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLI 516
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
+ + V E+ +++ V P++ +++ ++ G + G
Sbjct: 517 NFLCKKGLVEQAIELLKQML----------------VNGCSPDLISYSTVIDGLGKAGKT 560
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
++ ++ M G P+ YS + + E R+ + ++++ ++D + D V YN +
Sbjct: 561 DEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAV 620
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
I C+ GE RA EF M SG + T+ L+ G G V A + ++C KG
Sbjct: 621 ISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 83/232 (35%), Gaps = 68/232 (29%)
Query: 320 YNTIIGGFCEIGEM--------------------------------ARAEEFFREMGLSG 347
YN ++ G+C G++ A A EM G
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 189
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ ++ CR G SA+ V D+ +G + +++ +CD+ V EAL
Sbjct: 190 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 249
Query: 408 DILKARVVKFGLFPTEKSYMFLIKG----------------------------------- 432
+L+ + FG P SY ++KG
Sbjct: 250 HLLR-DLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 308
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LC G E +V A+MV G P + +Y+ IDG KEG++E+A + M
Sbjct: 309 LCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRM 360
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 196/461 (42%), Gaps = 67/461 (14%)
Query: 91 FFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV-- 148
FF F + + ++ +Y + L+ + A+ +I + + + +F LV
Sbjct: 104 FFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEM 163
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+ CG F+ D L+ + ++ I + R+ V + C L+ + +
Sbjct: 164 RVTPMCG---FLVDALM---ITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMK 217
Query: 209 --GKGVISGY--EIYREVFGLD-----------------SDATAGIGKDVKRVVRVRPNV 247
G I G+ EI F L+ SDA + KR ++P V
Sbjct: 218 LNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR--SLQPTV 275
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
+FN L+ G+ + G ++ + +M + PD ++YS L+ C+E +M A L++E
Sbjct: 276 VSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDE 335
Query: 308 M-----------------------------------RDKNVEHDVVAYNTIIGGFCEIGE 332
M K ++ D+V YNT++ GFC+ G+
Sbjct: 336 MCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGD 395
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A M G+ +T+ L++G+CR GDV++A+ + +M + G E +
Sbjct: 396 LVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSA 455
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
L+ +C + RV +A L+ +++ G+ P + +Y ++ C++G + K+ EM
Sbjct: 456 LVCGMCKEGRVIDAERALR-EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD 514
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
G PS+ Y+ ++G K G ++ A ML M V +D
Sbjct: 515 GHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDD 555
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 1/229 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN F L+ G R G + +++ + +M G +PD Y+ L+ FC+ + A +
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + + D + Y T+I GFC G++ A E +EM +G+E V F LV G C+
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCK 462
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G V A +M R G +P+ T +++ C K +LK + G P+
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLK-EMQSDGHVPSVV 521
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+Y L+ GLC+ G+M+ A + M+ G P Y+ ++G+ + N
Sbjct: 522 TYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RP+ T+ L+ GF R G E ++ EM + G E D +S L+ C+E R+ +AE
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EM ++ D V Y ++ FC+ G+ + +EM G S VT+ L+NG
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ G + +A ++ + M G P+ T L+
Sbjct: 531 CKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
+IV ++ RGL T LI RG V + EI +E +D + G ++ RV
Sbjct: 401 NIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKE---MDQN-----GIELDRV- 451
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
F+AL+ G +EG E EM R G +PD +Y+++M FC++ +
Sbjct: 452 -------GFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTG 504
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KL +EM+ VV YN ++ G C++G+M A+ M GV +T+ L+ G
Sbjct: 505 FKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Query: 362 YCRAGD 367
+ R +
Sbjct: 565 HHRHAN 570
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 179/380 (47%), Gaps = 35/380 (9%)
Query: 142 KLFEVLVKTYRECG---SAPFVFDLLIKCCLEV------------KNIEKIETCVDIVRM 186
K F+++ + Y + G VFD ++K L + K +I+ C++ R
Sbjct: 136 KFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRR 195
Query: 187 LMSRGLSVKVSTCNALI------WEVSRGKGVI---SGYEIYREVFGLDSDATA------ 231
++ G+ + V + ++ EV + K +I SG I E + ++ A
Sbjct: 196 MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRD 255
Query: 232 --GIGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
G+ K +K + + V N T+ L+ + G VE ++ EM G E D + Y+
Sbjct: 256 FSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTS 315
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L++ C + ++ A L++E+ +K + Y +I G C++GEM AE EM G
Sbjct: 316 LISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKG 375
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
V + V F L+NGYCR G +D A ++Y+ M +KGF+ + T + +R EA
Sbjct: 376 VNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAK 435
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
L R+++ G+ + SY LI C+EG +EEA ++ EM K +P+ Y+ I
Sbjct: 436 QWL-FRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYA 494
Query: 468 YMKEGNVEMATMLRKEMFEN 487
Y K+G V+ A L M N
Sbjct: 495 YCKQGKVKEARKLWANMKAN 514
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 145/326 (44%), Gaps = 22/326 (6%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI-WEVSRGKGVISGYEI 218
+ LLI+ ++ + +E D +R RG+ + +LI W +G I
Sbjct: 277 TYTLLIELSVKNGKMNDVEKLFDEMR---ERGIESDIHVYTSLISWNCRKGN-------I 326
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
R D G+ P+ HT+ AL+ G + G E + EM G
Sbjct: 327 KRAFLLFDELTEKGL----------LPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGV 376
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
++ L+ +C + + EA +++ M K + DV NTI F + A++
Sbjct: 377 NITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQ 436
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
+ M GV S+V++ +L++ YC+ G+V+ A ++ +M K +P T V+I C
Sbjct: 437 WLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYC 496
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ +V EA L A + G+ P +Y LI G C ++EA+++ +EM KG + +
Sbjct: 497 KQGKVKEARK-LWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNS 555
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ I G K G + A L E+
Sbjct: 556 VTYTVMISGLSKAGKSDEAFGLYDEI 581
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 90/155 (58%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VR + ++ L+ + +EG E+ + ++VEM+ +P+ +Y+V++ +C++ +++EA
Sbjct: 446 VRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEAR 505
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KLW M+ ++ D Y ++I G C + A F EMGL G++ +SVT+ +++G
Sbjct: 506 KLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGL 565
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+AG D A +Y+++ RKG+ + LIG +
Sbjct: 566 SKAGKSDEAFGLYDEIKRKGYTIDNKVYTALIGSM 600
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 1/216 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
FN L+ G+ R+G ++ ++ M + G + D ++ + + + F +R EA++ M
Sbjct: 383 FNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 442
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ V V+Y +I +C+ G + A+ F EM V+ +++T+ ++ YC+ G V
Sbjct: 443 EGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVK 502
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A ++ +M G +P+ T LI C V EA+ + +K GL +Y +
Sbjct: 503 EARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLK-GLDQNSVTYTVM 561
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
I GL + GK +EA + E+ KG+ ++Y+A I
Sbjct: 562 ISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALI 597
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 127/247 (51%), Gaps = 1/247 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V F+ ++ +EG + ++ M + G EPD +Y+ LM C + M EA
Sbjct: 261 KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEA 320
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+++ M K DV++Y T+I G+C+I ++ +A F EM + T+ L++G
Sbjct: 321 VKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHG 380
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C G + AI ++++M +G P+ T +L+ LC + EA+ +LKA + L P
Sbjct: 381 LCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKA-IEASNLNP 439
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ Y +I G+C G++E A + + + KG PS+ Y+ I G K G + A L
Sbjct: 440 DIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLF 499
Query: 482 KEMFENQ 488
EM N
Sbjct: 500 MEMDGND 506
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 123/245 (50%), Gaps = 5/245 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+ +L+ ++ V + +M PD +S ++ C+E ++ EA
Sbjct: 227 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAH 286
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ + M + VE DVV Y T++ G C EM A + F M G +++ L+NGY
Sbjct: 287 EIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGY 346
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ +D A+ ++ +MCRK + P+ T L+ LC R+ +A+ + V + G P
Sbjct: 347 CKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVAR-GQMPD 405
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ LC+ +EEA+ + + P +++Y+ IDG + G +E A +
Sbjct: 406 LVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAA----R 461
Query: 483 EMFEN 487
++F N
Sbjct: 462 DLFSN 466
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 183/417 (43%), Gaps = 32/417 (7%)
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVA--------------LRSP 135
F S + H + +LSS+ ++H+ ++ A+ + +A + S
Sbjct: 26 NFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSF 85
Query: 136 ENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
P + +L+ ++ F F +L K L++ + T ++R L G K
Sbjct: 86 GVPPNVYTLNILINSFCHLNRVGFAFSVLAKI-LKLGHQPDPTTFTTLIRGLCVEG---K 141
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVR--------PNV 247
+ L K + G++ +G + +G + +R P+V
Sbjct: 142 IGEALHLF-----DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDV 196
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
+ +++ ++ + +++ +M G PD ++Y+ L+ C + L +
Sbjct: 197 VIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQ 256
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M + + DVV ++T++ C+ G++ A E M GVE VT+ L++G+C +
Sbjct: 257 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE 316
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+D A+ V++ M RKGF P+ + LI C ++ +A+ + + K P K+Y
Sbjct: 317 MDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK-EWIPDTKTYN 375
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
L+ GLC G++++A+ + EMV +G P L YS +D K ++E A L K +
Sbjct: 376 TLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAI 432
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 114/248 (45%), Gaps = 1/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ F L+ + + V + +M G P+ Y+ ++L+ FC R+ A +
Sbjct: 54 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ + D + T+I G C G++ A F +M G + + VT+ L+NG C+
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ +AI + M + +P+ +I LC R+V EA ++ +++V G+ P
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF-SQMVGQGISPDIF 232
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L+ LC + + + +MV P + I+S +D KEG V A + M
Sbjct: 233 TYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM 292
Query: 485 FENQVRQE 492
+ V +
Sbjct: 293 IQRGVEPD 300
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 1/193 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N LM G G + ++ EM G PD +YS+L+ C+ + EA L
Sbjct: 369 PDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMAL 428
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + N+ D+ YN II G C GE+ A + F + G+ S T+ +++G C+
Sbjct: 429 LKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCK 488
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G ++ A ++ +M P+G T + A+ +L+ + + G
Sbjct: 489 RGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLAR-GFSADVS 547
Query: 425 SYMFLIKGLCEEG 437
+ L++ L ++G
Sbjct: 548 TTTLLVEMLSDDG 560
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ P++ +N ++ G R G E D++ ++ G P ++Y++++ C+ + EA
Sbjct: 436 NLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEA 495
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
KL+ EM + D YNTI GF + E RA + EM G + T LV
Sbjct: 496 NKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLV 553
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 135/260 (51%), Gaps = 16/260 (6%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV ++N +M+G R+ + V+ + G +P+ Y+YS+L+ + A
Sbjct: 474 IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNAL 533
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES-----SSVTFEH 357
++ M N+E + V Y TII G C++G+ ++A E M +E S +++
Sbjct: 534 EVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM----IEEKRLCVSCMSYNS 589
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL---DILKARV 414
+++G+ + G++DSA+ Y +MC G P T L+ LC R+ +AL D +K +
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
VK + +Y LI G C+ ME A + +E++ +G PS IY++ I G+ GN+
Sbjct: 650 VKLDI----PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 475 EMATMLRKEMFENQVRQEDG 494
A L K+M ++ +R + G
Sbjct: 706 VAALDLYKKMLKDGLRCDLG 725
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 126/241 (52%), Gaps = 1/241 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++N+++ GF++EG + + EM G P+ +Y+ LM C+ RM +A ++ +EM
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
++K V+ D+ AY +I GFC+ M A F E+ G+ S + L++G+ G++
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+A+ +Y M + G + T LI L + A + L + GL P E Y
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASE-LYTEMQAVGLVPDEIIYTV 764
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
++ GL ++G+ + +K+ EM P++ IY+A I G+ +EGN++ A L EM +
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824
Query: 489 V 489
+
Sbjct: 825 I 825
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 34/280 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY------------------- 285
PN TF+ L+ F + G EK + + +M LG P +
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431
Query: 286 ---------------SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
+ +++ C++ + EA +L +M + + +VV+YN ++ G C
Sbjct: 432 FDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQ 491
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
M A F + G++ ++ T+ L++G R D +A+ V N M E G
Sbjct: 492 KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVY 551
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+ +I LC + +A ++L + + L + SY +I G +EG+M+ A+ EM
Sbjct: 552 QTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC 611
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
G G P++ Y++ ++G K ++ A +R EM V+
Sbjct: 612 GNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVK 651
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 107/518 (20%), Positives = 200/518 (38%), Gaps = 81/518 (15%)
Query: 24 SQFSTSSSTPPSDQ---------SHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQF 74
SQF S P +Q N + + VSLL+ + ++
Sbjct: 29 SQFPKESENPSQEQRLLVYGSTSEENPVTSKVSLLSAKPEQKDDASVI------------ 76
Query: 75 SQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHIL-SRARLIGPARDVIRVALR 133
+ L +NNP ALRF+++ + + +IHIL S G A D++ +
Sbjct: 77 -DVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLIRYVS 135
Query: 134 SPENDPKLK-LFEVLVKTYRECG--SAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSR 190
+ P L LV + + G F+ L+ + + + + VDIV ++
Sbjct: 136 TSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDR---QTDHAVDIVNQMLEL 192
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTF 250
+ N + + + + E+Y + + D G +V T
Sbjct: 193 DVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVD-----GDNV-----------TT 236
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
LM RE + +V G EPD YS+ + C+ + A L EM++
Sbjct: 237 QLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKE 296
Query: 311 KNV-EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + Y ++I + G M A EM G+ + V L+ G+C+ D+
Sbjct: 297 KKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLV 356
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
SA+++++ M ++G P T VLI + +AL+ K V GL P+ +
Sbjct: 357 SALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEV-LGLTPSVFHVHTI 415
Query: 430 IKG----------------------------------LCEEGKMEEALKVQAEMVGKGFE 455
I+G LC++GK +EA ++ ++M +G
Sbjct: 416 IQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
P++ Y+ + G+ ++ N+++A ++ + E ++ +
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNN 513
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 80/152 (52%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ +N+L+ GF G D++ +M + G D +Y+ L+ ++ + A
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ EM+ + D + Y I+ G + G+ + + F EM + V + + + ++ G+
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
R G++D A ++++M KG P+G+T ++L+
Sbjct: 805 YREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 108/223 (48%), Gaps = 2/223 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+ ++++ ++G + + EM G + + + L+ C+ + A L
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++M + + V ++ +I F + GEM +A EF+++M + G+ S ++ G+ +
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ A+ ++++ G ++ LC + + EA ++L +++ G+ P
Sbjct: 422 GQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELL-SKMESRGIGPNVV 479
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
SY ++ G C + M+ A V + ++ KG +P+ YS IDG
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG 522
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+E+ + L+ GL+ N+LI +++ ++Y+++ K
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML-----------K 717
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D +R ++ T+ L+ G ++G +++ EM +G PD Y+V++ ++
Sbjct: 718 D-----GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKK 772
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ + K++EEM+ NV +V+ YN +I G G + A EM G+ TF
Sbjct: 773 GQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
Query: 356 EHLVNG 361
+ LV+G
Sbjct: 833 DILVSG 838
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 150/326 (46%), Gaps = 20/326 (6%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSD---------- 228
V +++L ++G ++ CN ++ + V G E+ R++ FG + D
Sbjct: 163 VRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKG 222
Query: 229 -ATAGIGKDVKRV----VRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
A DV+ + VRV PNV TFN L+ R G FE+V + +M GC PD
Sbjct: 223 LCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPD 282
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
Y+ ++ C++ A + M ++ +VV YNT++ G C AE+
Sbjct: 283 LRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLA 342
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM VTF LV+ +C+ G VD I + M G P+ T +I C +
Sbjct: 343 EMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEG 402
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
V EA+ +LK + G P SY ++KGLC + +A ++ + M+ +G P+ +
Sbjct: 403 LVDEAVMLLK-NMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTF 461
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFEN 487
+ I+ K+G VE A L K+M N
Sbjct: 462 NTLINFMCKKGLVEQAIELLKQMLVN 487
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 127/250 (50%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV +N ++ G +E+ ED+ EM + C D ++++L+ FC+ +
Sbjct: 314 LKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVI 373
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L E+M + DV+ Y T+I GFC+ G + A + M G + +++++ ++ G
Sbjct: 374 ELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGL 433
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRA A + + M ++G P T LI +C K V +A+++LK +V G P
Sbjct: 434 CRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVN-GCSPD 492
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY +I GL + GK EEAL++ M+ KG P+ IYS+ +EG + +
Sbjct: 493 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFD 552
Query: 483 EMFENQVRQE 492
+ + VR +
Sbjct: 553 SIQDATVRSD 562
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 179/405 (44%), Gaps = 45/405 (11%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN--DPKLKLFEVLVKTYRECGSAP 158
C +++++ T+I L R L + + + PE+ P L+++ ++ + G
Sbjct: 244 CPPNVATFNTLIAYLCRNGLFEQVHEALS---QMPEHGCTPDLRMYATIIDGICKDGHHE 300
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
D+L + + ++ C + V +GL C+A WE + +++ E+
Sbjct: 301 VANDILSR--MPSYGLKPNVVCYNTVL----KGL------CSAERWE--EAEDLLA--EM 344
Query: 219 YREVFGLDSDATAGIGKD-------VKRVVRVR---------PNVHTFNALMVGFYREGA 262
++E LD D T I D V RV+ + P+V T+ ++ GF +EG
Sbjct: 345 FQEDCPLD-DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 403
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
++ + M+ GC+P+ SY++++ C R +A++L M + + V +NT
Sbjct: 404 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNT 463
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I C+ G + +A E ++M ++G +++ +++G +AG + A+ + N M KG
Sbjct: 464 LINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKG 523
Query: 383 FEPEGSTIEVLIGELCDKRR---VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
P + L + R + + D ++ V+ Y +I LC+ +
Sbjct: 524 ITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVR----SDAALYNAVISSLCKRWET 579
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ A+ A MV G P+ Y+ I G EG V A L E+
Sbjct: 580 DRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 624
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 104/253 (41%), Gaps = 1/253 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V PN +T+ ++ G V EM GC V++ C R
Sbjct: 102 VPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A + + + K D N ++ CE G + E R++ G E V++ ++
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C A D + +M R G P +T LI LC + +FE + +++ + G
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLC-RNGLFEQVHEALSQMPEHGCT 280
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P + Y +I G+C++G E A + + M G +P++ Y+ + G E A L
Sbjct: 281 PDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDL 340
Query: 481 RKEMFENQVRQED 493
EMF+ +D
Sbjct: 341 LAEMFQEDCPLDD 353
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 92/234 (39%), Gaps = 36/234 (15%)
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE------------- 332
S L+ C R +A + + D VVAYN +I G+C G+
Sbjct: 48 SALIRSLCAAGRTADAARALDTAGDA---AGVVAYNAMIAGYCRAGQVAAARRLAAAVPV 104
Query: 333 -------------------MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
+A A EM L G ++ ++ CR G SA+
Sbjct: 105 PPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVR 164
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ KG + +++ +C++ V E +++L+ ++ FG P SY ++KGL
Sbjct: 165 ALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLR-KLPSFGCEPDIVSYNAVLKGL 223
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
C + ++ ++ EMV G P++ ++ I + G E +M E+
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEH 277
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 146 VLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVD---IVRMLMSRGLSVKVSTCNAL 202
+L+K CG P I +K + + E VD ++ ++ +G T N L
Sbjct: 409 MLLKNMSACGCKPNTISYTIV----LKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTL 464
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
I + + V E+ +++ V P++ +++ ++ G + G
Sbjct: 465 INFMCKKGLVEQAIELLKQML----------------VNGCSPDLISYSTVIDGLGKAGK 508
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
E+ ++ M G P+ YS + + E R + ++++ ++D V D YN
Sbjct: 509 TEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNA 568
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
+I C+ E RA +FF M +G + T+ L+ G G V A + +++C +
Sbjct: 569 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 627
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 185/402 (46%), Gaps = 40/402 (9%)
Query: 108 YATIIHILSRARLIGP-----ARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFD 162
YA + +R G A ++ ++ E P +L +++ K Y E +A V +
Sbjct: 357 YAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLN 416
Query: 163 LLIKCCLE--VKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
+ + + K E I++ +M +G ST +I + + K V + +++
Sbjct: 417 KVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQ 476
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
E+ KR V P+V+T+ L+ F + G E+ + EM +GC P
Sbjct: 477 EM---------------KRA-GVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSP 520
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+ +Y+ L+ + + +++ +A ++ M D + V Y+ +I G C+ GE+ +A E +
Sbjct: 521 NVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVY 580
Query: 341 REM-GLSG-VES--------------SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
++ G SG VES + VT+ L++G C+A V A + + M G E
Sbjct: 581 EKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCE 640
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P + LI C ++ A ++ R+ K G P+ +Y LI + ++G+++ A+K
Sbjct: 641 PNQIVYDALIDGFCKIGKIDNAQEVF-LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 699
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
V +EM+ P++ Y+A IDG K G +E A L M E
Sbjct: 700 VLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEE 741
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 126/261 (48%), Gaps = 21/261 (8%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+ ++ + EK ++ EM R G PD Y+Y++L+ FC+ + +A
Sbjct: 450 PDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSW 509
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++EMR +VV Y ++ + + ++ +A + F M + ++VT+ L++G C+
Sbjct: 510 FDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCK 569
Query: 365 AGDVDSAILVY------------------NDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
AG++ A VY ND C P T LI LC ++V +A
Sbjct: 570 AGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCT--IAPNVVTYGALIDGLCKAQKVSDA 627
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
++L A + G P + Y LI G C+ GK++ A +V M G+ PS+ Y++ ID
Sbjct: 628 HELLDAMLAA-GCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLID 686
Query: 467 GYMKEGNVEMATMLRKEMFEN 487
K+G +++A + EM +
Sbjct: 687 RMFKDGRLDLAMKVLSEMLND 707
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 176/401 (43%), Gaps = 39/401 (9%)
Query: 94 FTQHKSL-CKHSLSSYATIIHILSRARLIGPARDVIRVALRS---PENDPKLKLFEVLVK 149
F + +S+ C ++ +Y ++H +++ + A D+ + + P L + L K
Sbjct: 510 FDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCK 569
Query: 150 TYRECGSAPFVFDLLIKCCLEVKN---IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
E A V++ LI V++ E +TC ++ V T ALI +
Sbjct: 570 A-GEIQKACEVYEKLIGTSGNVESDFYFEGNDTCT----------IAPNVVTYGALIDGL 618
Query: 207 SRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
+ + V +E+ LD+ AG PN ++AL+ GF + G +
Sbjct: 619 CKAQKVSDAHEL------LDAMLAAG----------CEPNQIVYDALIDGFCKIGKIDNA 662
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
++V++ M + G P ++Y+ L+ ++ R+ A K+ EM + + +VV Y +I G
Sbjct: 663 QEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDG 722
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
++GE+ +A M G + VT+ L++G + G D+++ ++ M KG P
Sbjct: 723 LSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPN 782
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE-KSYMFLIKGLCEEGKMEEALKV 445
T VLI C + EA +L +K +P + Y ++G + K +L +
Sbjct: 783 YVTYRVLINHCCAAGLLDEAHLLLDE--MKHTHWPKHLQGYHCAVQGFSK--KFIASLGL 838
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
EM P +Y ID + K G +E A L KE+ E
Sbjct: 839 LEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVE 879
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 181/431 (41%), Gaps = 53/431 (12%)
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKL-- 141
+P L +RFF + + + H+ + Y + IL PAR R+ E+D ++
Sbjct: 113 SPELCVRFFLWAERQVGYSHTGACYDALAEILG---FEDPARTAERLLREIGEDDREVLR 169
Query: 142 KLFEVLVKT----------------YRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDI 183
+L VLV+ ++ G P ++ L++ + + ++E +
Sbjct: 170 RLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQV---LASAGQVEMGFRV 226
Query: 184 VRMLMSRGLSVKVSTCNAL---IWEVSRGKGVISGYEIYREVFGLDS----DATAGI--- 233
+ + + G + ST + +V R ++ E +E F LD+ +G+
Sbjct: 227 QKEMSASGFCMDRSTIGYFAQALCKVGRWADALNMLE--KEDFNLDTVLCTQMISGLMEA 284
Query: 234 ---GKDVKRVVRVR-----PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
+ + + R+R PNV T+ L+ GF ++ F + + M GC P+ +
Sbjct: 285 SLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLF 344
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA------EEF 339
+ L+ +C A KL+ M VAYN IG C E+ A E+
Sbjct: 345 NSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKV 404
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+ EM + + V + C G + A + +M RKGF P+ ST +I LC
Sbjct: 405 YEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQ 464
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
++V ++ +L + + G+ P +Y LI C+ G +E+A EM G P++
Sbjct: 465 AKKVEKSF-LLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVV 523
Query: 460 IYSAFIDGYMK 470
Y+A + Y+K
Sbjct: 524 TYTALLHAYLK 534
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 35/271 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+VHT+ +L+ +++G + V EM C P+ +Y+ ++ + + +A L
Sbjct: 676 PSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNL 735
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M +K +VV Y +I G + G+ + + F++M G + VT+ L+N C
Sbjct: 736 LSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCA 795
Query: 365 AGDVDSAILVYNDM-------------CR-KGFE-------------------PEGSTIE 391
AG +D A L+ ++M C +GF P
Sbjct: 796 AGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYG 855
Query: 392 VLIGELCDKRRVFEALDILKARV-VKFGLFPTEKS-YMFLIKGLCEEGKMEEALKVQAEM 449
+LI R+ AL++ K V V L T Y LI+ LC ++EEA + EM
Sbjct: 856 MLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEM 915
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
KG P L ++ + + G ++ + A L
Sbjct: 916 TRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 36/205 (17%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+ AL+ G + G + ++ +M GC P+ +Y VL+ C + EA L
Sbjct: 746 PNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLL 805
Query: 305 WEEMRDKNV-----------------------------EHDVV----AYNTIIGGFCEIG 331
+EM+ + H+ V Y +I F + G
Sbjct: 806 LDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAG 865
Query: 332 EMARAEEFFREM---GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ A E +E+ S +S+ + L+ C A V+ A +Y +M RKG P+
Sbjct: 866 RLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLI 925
Query: 389 TIEVLIGELCDKRRVFEALDILKAR 413
L+ L + + EAL + R
Sbjct: 926 VFVSLVKGLIEVNKWDEALQLCYGR 950
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 75/187 (40%), Gaps = 4/187 (2%)
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y L + E R AE+L E+ + + E N ++ C G A E +
Sbjct: 137 YDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLK 196
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G S+VT+ LV AG V+ V +M GF + STI LC R
Sbjct: 197 DFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWA 256
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+AL++L+ F L + M I GL E EA+ M P++ Y
Sbjct: 257 DALNMLEKE--DFNLDTVLCTQM--ISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTL 312
Query: 465 IDGYMKE 471
+ G++K+
Sbjct: 313 LSGFLKK 319
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 122/347 (35%), Gaps = 83/347 (23%)
Query: 216 YEIYREVFGLDSDATAG------IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDV 269
Y+ E+ G + A IG+D + V+R N L+ R G +++ +
Sbjct: 137 YDALAEILGFEDPARTAERLLREIGEDDREVLR-----RLLNVLVRRCCRHGLWDEALEE 191
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+ G P +Y+ L+ V ++ ++ +EM D C+
Sbjct: 192 LGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCK 251
Query: 330 IGEMARA------EEFFREMGL-----SGVESSS---------------------VTFEH 357
+G A A E+F + L SG+ +S VT+
Sbjct: 252 VGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRT 311
Query: 358 LVNGY-----------------------------------CRAGDVDSAILVYNDMCRKG 382
L++G+ C AGD A ++N M G
Sbjct: 312 LLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCG 371
Query: 383 FEPEGSTIEVLIGELCDKRRV--FEALDILKA---RVVKFGLFPTEKSYMFLIKGLCEEG 437
P + IG +C + + E LD+++ ++ + + + LC G
Sbjct: 372 SPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVG 431
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
K E+A ++ EM+ KGF P Y+ I + VE + +L +EM
Sbjct: 432 KFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEM 478
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 138/270 (51%), Gaps = 16/270 (5%)
Query: 231 AGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+G D R++R + PNV TF AL+ F REG F + + + EM R +PD ++
Sbjct: 222 SGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFT 281
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+ ++ C ++ EA+++ + M K DVV YNT+I GFC+ + + REM
Sbjct: 282 YNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMS 341
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G+ +VTF ++ GY +AG D+A +++ R G P T +L+ LC RV
Sbjct: 342 QRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFS---RMGSRPNIRTYSILLYGLCYNWRVE 398
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+AL +L + K + +Y +I G+C G +E+A + + KG EP + Y+
Sbjct: 399 KAL-VLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTM 457
Query: 465 IDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
I G+ ++ + A L ++M QEDG
Sbjct: 458 ISGFCRKRLWDKADFLYRKM------QEDG 481
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 117/239 (48%), Gaps = 1/239 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+++T+N ++ R F V +M + G EPD + S L+ FC+ R+ A L
Sbjct: 103 DLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLV 162
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M + + DVV YNTII GFC+ G + A F M GV + +VT+ LV G C +
Sbjct: 163 SKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCS 222
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G A + DM + P T LI + + EA + +++ + P +
Sbjct: 223 GRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYE-EMIRRCIDPDVFT 281
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y +I GLC G+++EA ++ MV KG P + Y+ I+G+ K V+ T L +EM
Sbjct: 282 YNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREM 340
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 110/233 (47%), Gaps = 1/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T ++L+ GF + D+ +M + C+ D Y+ ++ FC+ + A L
Sbjct: 137 PDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVL 196
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M V D V YN+++ G C G + A R+M + + + +TF L+N + R
Sbjct: 197 FGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVR 256
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G A Y +M R+ +P+ T +I LC +V EA IL V K G FP
Sbjct: 257 EGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTK-GCFPDVV 315
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI G C+ +++E K+ EM +G ++ I GY + G + A
Sbjct: 316 TYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAA 368
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 112/236 (47%), Gaps = 1/236 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P++ F+ L+ + ++ V ++ M G D Y+Y++++ C R A
Sbjct: 64 RPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIA 123
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ +M E DVV +++I GFC+ + A + +M + V + +++G
Sbjct: 124 LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDG 183
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C+ G V++A++++ M R G + T L+ LC R +A +++ V++ + P
Sbjct: 184 FCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMR-DIVP 242
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
++ LI EGK EA K EM+ + +P + Y++ I G G V+ A
Sbjct: 243 NVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEA 298
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
I+ +++++G V T N LI + K V G ++ RE+ + G+ D
Sbjct: 301 ILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREM------SQRGLVVDTV---- 350
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
TFN ++ G+++ G + ++++ +R+G P+ +YS+L+ C R+ +A
Sbjct: 351 ------TFNTIIQGYFQAGRPDAAQEIF---SRMGSRPNIRTYSILLYGLCYNWRVEKAL 401
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+E M+ +E D+ YN +I G C IG + A + F + G+E VT+ +++G+
Sbjct: 402 VLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGF 461
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
CR D A +Y M G P
Sbjct: 462 CRKRLWDKADFLYRKMQEDGLLP 484
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 5/224 (2%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
D++ M + P +S L++ + + L+ M + HD+ YN +I
Sbjct: 55 DLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCL 114
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C A +M G E VT L+NG+C+ V A+ + + M + +
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDV 174
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+I C V AL +L R+ + G+ +Y L+ GLC G+ +A ++
Sbjct: 175 VIYNTIIDGFCKTGLVNNAL-VLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMR 233
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
+MV + P++ ++A I+ +++EG A K+ +E +R+
Sbjct: 234 DMVMRDIVPNVITFTALINAFVREGKFLEA----KKFYEEMIRR 273
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A + F M S S V F L++ ++ + D I ++++M G + T ++I
Sbjct: 53 AIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVIN 112
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
LC R AL ++ +++KFG P + LI G C+ ++ A+ + ++M +
Sbjct: 113 CLCRCSRFVIALSVV-GKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCK 171
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ IY+ IDG+ K G V A +L M + VR +
Sbjct: 172 LDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRAD 208
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 197/425 (46%), Gaps = 53/425 (12%)
Query: 82 KNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR------------ 129
+ +P AL F+ + H+ ++YATI+H L++++ V+
Sbjct: 70 ETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEG 129
Query: 130 VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETC--------- 180
+ L ++ KL L E +V+ +FD + E +++ I TC
Sbjct: 130 IFLNLMKHFSKLSLHERVVE----------MFDAIRPIVREKPSLKAISTCLNLLVESNQ 179
Query: 181 VDIVRMLM---SRGLSVKVSTC--NALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
VD+ R + + L+++ +TC N L+ + + S +E+ E+
Sbjct: 180 VDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEM------------- 226
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM-ARLGCEPDCYSYSVLMAVFCE 294
K+ PN+ T++ L+ G G ++ +++ EM ++ PD +Y+ L+ FC
Sbjct: 227 --KKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCH 284
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
++ A K+ E M+ +V Y+ ++ GFC+ G + A+E F EM G++ +V
Sbjct: 285 GEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVG 344
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+N +CRAG VD A+ + DM + T V++G LC + R EA +L+ R+
Sbjct: 345 YTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLE-RL 403
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
G++ + SY ++ LC EG++++A ++ M+G+G P + + + G V
Sbjct: 404 PYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKV 463
Query: 475 EMATM 479
A M
Sbjct: 464 GDAVM 468
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 171/356 (48%), Gaps = 14/356 (3%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
K SL + +T +++L + + R + + +S +P +F +LVK + + G F
Sbjct: 161 KPSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAF 220
Query: 162 DL---LIKCCLEVKNIEKIETCVDIV----RMLMSRGLSVKVSTCNALIWEVSRGKGVIS 214
++ + K + N+ T ++ + R+ + L ++ + + ++ + +I+
Sbjct: 221 EVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALIN 280
Query: 215 GYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
G+ G D I + +K+ PNV ++ALM GF +EG E+ ++V+ EM
Sbjct: 281 GF-----CHGEKVDRALKIMEFMKKN-GCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMK 334
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
LG +PD Y+ L+ FC R+ EA +L ++MR+ D V +N I+GG C G
Sbjct: 335 SLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFE 394
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
A + GV + ++ ++N CR G++ A + M +G P +T L+
Sbjct: 395 EARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELL 454
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
LC+ +V +A+ L +++ G P S+ L++ +C E K+ A ++ ++V
Sbjct: 455 VHLCEAGKVGDAVMALLG-LLELGFKPEPNSWALLVELICRERKLLPAFELLDDLV 509
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 120/247 (48%), Gaps = 5/247 (2%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCE-PDCYSYSVLMAVFCEERRMREAEK-LWEE 307
F LM F + E+V +++ + + E P + S + + E ++ K L
Sbjct: 131 FLNLMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRKFLLNS 190
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS-VTFEHLVNGYCRAG 366
+ N+E + +N ++ C+ G++ A E EM S V + +T+ L+NG C +G
Sbjct: 191 KKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSG 250
Query: 367 DVDSAILVYNDMCRKG-FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+ AI ++ +M K P+ T LI C +V AL I++ + K G P +
Sbjct: 251 RLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEF-MKKNGCNPNVFN 309
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y L+ G C+EG++EEA +V EM G +P Y+ I+ + + G V+ A L K+M
Sbjct: 310 YSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMR 369
Query: 486 ENQVRQE 492
EN+ R +
Sbjct: 370 ENKCRAD 376
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 172/374 (45%), Gaps = 41/374 (10%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+Y ++H L R + AR ++ + P +P + LF L+ Y G
Sbjct: 342 TYGVLMHGLCRMGKVDEARMLLN---KVP--NPNVVLFNTLINGYVSRGRLD-------- 388
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
E K + ++S G + T N LI + + ++S E+ E+
Sbjct: 389 ---EAKAVMH--------ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM---- 433
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
++ PNV T+ L+ F +EG E+ +V EM+ G + Y+
Sbjct: 434 ------------QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYN 481
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L++ C++ ++++A ++ +M K + D+ +N++I G C++ + A +++M L
Sbjct: 482 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 541
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
GV ++++T+ L++ + R G + A+ + NDM +G + T LI LC + +
Sbjct: 542 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 601
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L + + + K GL P S LI GLC G ++ AL+ +M+ +G P + Y++ I+
Sbjct: 602 LALFEDMMSK-GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLIN 660
Query: 467 GYMKEGNVEMATML 480
G K G + A L
Sbjct: 661 GLCKTGRAQEALNL 674
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 215/503 (42%), Gaps = 44/503 (8%)
Query: 3 VQILKHIIFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLL 62
+ I+KH P +LL S P+ +S+N++ V LL + K N
Sbjct: 168 ILIMKHY-GRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDV--LLAGNCPKVVPNVFY 224
Query: 63 SLCRSGLTPTQFS----QIALGLKNNPHLALRFF-SFTQHKSLCKHSLSSYATIIHILSR 117
+ G++PT ++ AL L N A T+H C + Y T+IH LS+
Sbjct: 225 EMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHG--CVPNAIVYQTLIHALSK 282
Query: 118 ARLIGPARDVIRVALRS------PENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLE- 170
+G +V+++ P+ + L K R +A V +L++
Sbjct: 283 ---VGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPN 339
Query: 171 --VKNIEKIETC----VDIVRMLMSRGLSVKVSTCNALI-WEVSRGKGVISGYEIYREVF 223
+ C VD RML+++ + V N LI VSRG+
Sbjct: 340 SFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGR------------- 386
Query: 224 GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
D + + V P++ T+N L++G ++G ++ EM GCEP+
Sbjct: 387 ---LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVI 443
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+Y++L+ FC+E R+ EA + +EM K + + V YN +I C+ ++ A F +M
Sbjct: 444 TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 503
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G + TF L+ G C+ + A+ +Y DM +G T LI + +
Sbjct: 504 SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 563
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
EAL ++ + + G + +Y LIK LC G +E+ L + +M+ KG P+ +
Sbjct: 564 QEALKLVNDMLFR-GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 622
Query: 464 FIDGYMKEGNVEMATMLRKEMFE 486
I+G + GN++ A ++M
Sbjct: 623 LINGLCRTGNIQHALEFLRDMIH 645
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 115/232 (49%), Gaps = 1/232 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P++ TFN+L+ G + FE+ ++ +M G + +Y+ L+ F M+EA K
Sbjct: 509 KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALK 568
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +M + D + YN +I C G + + F +M G+ ++++ L+NG C
Sbjct: 569 LVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLC 628
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G++ A+ DM +G P+ T LI LC R EAL++ V+ G+ P
Sbjct: 629 RTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE-GICPDA 687
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+Y LI C+EG ++A + + V GF P+ + + ++KEG+ E
Sbjct: 688 ITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 145/345 (42%), Gaps = 48/345 (13%)
Query: 182 DIVRMLMSR-GLSVKVSTCNALIWEVSRGKGVISGYEIYREVF------GLDSDATAGIG 234
D+ ML+ + G + + T +AL+ ++ + +G++ ++ + GL AT +
Sbjct: 130 DVYYMLIDKLGAAGEFKTTDALLMQMKQ-EGIVFRESLFILIMKHYGRAGLPGQATRLL- 187
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
D++ V P ++N ++ + V +V+ EM G P Y++ V+M C
Sbjct: 188 LDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCL 247
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTI------------------------------- 323
+ A L ++M + + Y T+
Sbjct: 248 VNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNT 307
Query: 324 ----IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
I G C++ + A + M L G +S T+ L++G CR G VD A ++ N
Sbjct: 308 FNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLN--- 364
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
K P LI + R+ EA ++ ++ G P +Y LI GLC++G +
Sbjct: 365 -KVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYL 423
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
A ++ EM KG EP++ Y+ ID + KEG +E A + EM
Sbjct: 424 VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM 468
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 143/312 (45%), Gaps = 18/312 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K+ + ++ M+ G+ +S CN I + G + +
Sbjct: 247 KLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM------------- 293
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
++V + PNV T+N L+ G+ E ++ EM GC PD SY +M C+E
Sbjct: 294 ---QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKE 350
Query: 296 RRMREAEKLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+R++E L E+M +D N+ D V YNT + + G A EF RE V
Sbjct: 351 KRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVG 410
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ +V+ +CR G +D A + N+M KG P+ T +I LC +R+V +A +L+ ++
Sbjct: 411 YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLR-QM 469
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
K G P SY L+ GLC+ G EA ++ + P+ YS + G+ +EG
Sbjct: 470 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 529
Query: 475 EMATMLRKEMFE 486
A L +EM +
Sbjct: 530 SEACDLVREMIK 541
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 122/244 (50%), Gaps = 1/244 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R R + ++A++ F REG +K +++ EM GC PD +Y+ ++ C+ER++ +A
Sbjct: 403 RFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQA 462
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+K+ +M + + V+Y ++ G C+ G A E +++T+ L++G
Sbjct: 463 KKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHG 522
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ R G A + +M +KGF P I +LI LC + +V EA ++ + + G
Sbjct: 523 FRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFME-QCLNNGCAV 581
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
++ +I G C++ +E AL + +M P + Y+ ID K+G +E AT L
Sbjct: 582 NVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLA 641
Query: 482 KEMF 485
+M
Sbjct: 642 MKML 645
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 121/241 (50%), Gaps = 1/241 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N + + G ++ + E D YS ++ FC E RM +A+++
Sbjct: 371 PDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEI 430
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM K DVV Y ++I G C+ ++ +A++ R+M G + ++V++ L+NG C+
Sbjct: 431 VNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCK 490
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ A + N + P T VL+ + + EA D+++ ++K G FPT
Sbjct: 491 NGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVR-EMIKKGFFPTPV 549
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LI+ LC+E K++EA + + + G ++ ++ I G+ ++ ++E A L +M
Sbjct: 550 EINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDM 609
Query: 485 F 485
+
Sbjct: 610 Y 610
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 3/245 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T++ LM GF REG + D+ EM + G P ++L+ C+E ++ EA++
Sbjct: 511 PNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRF 570
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+ + +VV + T+I GFC+ ++ A +M LS VT+ +++ +
Sbjct: 571 MEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGK 630
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G ++ A + M R G P T +I + C RV + L +L+ + +
Sbjct: 631 KGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR---QECRT 687
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I+ LC G +E+A K+ +++ + I+ Y+ +G M+ + M
Sbjct: 688 AYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRM 747
Query: 485 FENQV 489
F +
Sbjct: 748 FNRNL 752
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 16/251 (6%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RP F +MV + R G V M + G EPD + + V R+ +A +
Sbjct: 231 RP--EAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVR 288
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
E M+ +E +V+ YN +I G+C++ + A E EM G +++ ++ C
Sbjct: 289 FLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLC 348
Query: 364 RAGDVDSAILVYNDMCR-KGFEPEGSTIEVLIGELCDKRRVFEALDILKA------RVVK 416
+ + L+ M + P+ T + L EAL+ L+ RV K
Sbjct: 349 KEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDK 408
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G Y ++ C EG+M++A ++ EM KG P + Y++ I+G +E V+
Sbjct: 409 VG-------YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQ 461
Query: 477 ATMLRKEMFEN 487
A + ++M+++
Sbjct: 462 AKKMLRQMYKH 472
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 129/256 (50%), Gaps = 4/256 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEM-ARLGCEPDCYSYSVLMAVFCEERRMREA 301
V P+V TFN+L++ + G V+ EM G PD Y++++L+ FC+ + E
Sbjct: 128 VSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEG 187
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM--GLSGVESSSVTFEHLV 359
+ ++EM N E DVV YNT++ G C G++ A + M + + VT+ LV
Sbjct: 188 FRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLV 247
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
GYC ++D A++V+ +M +G +P T LI LC+ ++ + +IL V G
Sbjct: 248 RGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGF 307
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y L+ C+ G +EALK+ +M +P YS I + G+ E A
Sbjct: 308 VPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQ 367
Query: 480 LRKEMF-ENQVRQEDG 494
L ++ E+ + ++DG
Sbjct: 368 LFDKLSDEDILLRDDG 383
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 195/492 (39%), Gaps = 118/492 (23%)
Query: 61 LLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARL 120
L SL S ++ T F Q+ L +P A FF++ H SY ++ IL R
Sbjct: 18 LFSLSPS-ISKTTFFQV-LRFIASPPKAFEFFNWASRNGFA-HDSRSYFMMLDILGRNGN 74
Query: 121 IGPARDVIRVALRSPENDPKL--KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIE 178
+ AR+ + R K+ + L+++Y G +F+ IK
Sbjct: 75 LNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAG----LFNEAIK------------ 118
Query: 179 TCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK 238
+ ++ S G+S V T N+L+ + + + ++ E+ G T G
Sbjct: 119 ----LFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCG-----TYG------ 163
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
V P+ +TFN L+ GF + ++ + EM+R CEPD +Y+ L+ C ++
Sbjct: 164 ----VTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKV 219
Query: 299 R-------------------------------------EAEKLWEEMRDKNVEHDVVAYN 321
R EA ++EEM + ++ + + YN
Sbjct: 220 RIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYN 279
Query: 322 TIIGGFCEIGEMARAEEFFR-EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
T+I G CE+ + + +E +G G + T+ L+N C AG+ D A+ ++ M
Sbjct: 280 TLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKE 339
Query: 381 KGFEPEGSTIEVLIGELCDK------RRVFEAL---DIL--------------------- 410
+P+ +T VLI LC + ++F+ L DIL
Sbjct: 340 LKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLC 399
Query: 411 ------KARVVKFGLFPT----EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
KA V L SY LI G C+EG E K+ M+ + + P E
Sbjct: 400 KNGKTHKAERVFRQLMKKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFET 459
Query: 461 YSAFIDGYMKEG 472
Y I+G++++G
Sbjct: 460 YVLLINGFLQKG 471
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/521 (20%), Positives = 213/521 (40%), Gaps = 118/521 (22%)
Query: 29 SSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS-GLTPTQ--FSQIALGLKNNP 85
SS PS + N + ++ LL R+ + +C + G+TP F+ + G N
Sbjct: 125 SSGVSPSVITFN--SLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNS 182
Query: 86 HL--ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN-DPKLK 142
+ RFF + C+ + +Y T++ L RA + A +V++ ++ ++ P +
Sbjct: 183 MVDEGFRFFK-EMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVV 241
Query: 143 LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
+ LV+ Y C++ ++I+ + + ++SRGL T N L
Sbjct: 242 TYTTLVRGY----------------CMK----QEIDEALVVFEEMVSRGLKPNDITYNTL 281
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
I +G + ++ +E+ G A G G P+ T+N LM G
Sbjct: 282 I----KGLCEVQKFDKIKEILG---GAVGGRG--------FVPDTCTYNTLMNAQCDAGN 326
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV--EHD---- 316
F++ ++ +M L +PD +YSVL+ C+ AE+L++++ D+++ D
Sbjct: 327 FDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTP 386
Query: 317 -VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG--------- 366
V AYN I C+ G+ +AE FR++ G + +++ L+ G+C+ G
Sbjct: 387 LVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPP-SYKTLIIGHCKEGTFEAGYKLL 445
Query: 367 ----------DVDSAILVYNDMCRKG----------------FEPEGSTIEVLIGELCDK 400
D ++ +L+ N +KG + P+ S ++ EL
Sbjct: 446 LFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKN 505
Query: 401 ---------------RRVFEALDI------------LKARVVKFGLFPTEKSYMF----L 429
R++ + +++ L+ + + + YM L
Sbjct: 506 DFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYDNGYMVDMEEL 565
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
I +C+ GK+ +A K+ + + KG + + + I+G K
Sbjct: 566 IGFICQNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEGLCK 606
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%)
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L+ Y AG + AI +++ M G P T L+ L + R A + +
Sbjct: 103 LLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTY 162
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G+ P ++ LI+G C+ ++E + EM EP + Y+ +DG + G V +A
Sbjct: 163 GVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIA 222
Query: 478 TMLRKEM 484
+ K M
Sbjct: 223 HNVVKGM 229
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 190/445 (42%), Gaps = 68/445 (15%)
Query: 77 IALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPE 136
+ L PH ALR F + + L + + A ++ L+RAR+ AR V R+
Sbjct: 122 LVLAQSARPHDALRVFDQMRARGLAPDAHACTA-LLTALARARMTATARRVFDEMARA-- 178
Query: 137 NDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVD-------------- 182
+ V T+ V++ ++ CL+ + + E V
Sbjct: 179 --------GLAVSTH--------VYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSY 222
Query: 183 -----------------IVRMLMSR-GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG 224
VR M + G+ T N+LI + + V +++ E+
Sbjct: 223 NTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAA 282
Query: 225 LDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+ P+ T+ L+ G+ R G E+ + EM G P +
Sbjct: 283 ----------------AQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVAT 326
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+ ++ CE+ +M+E +L EM ++ V+ D V NT+I +C+ G M A + ++M
Sbjct: 327 YNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMM 386
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
SG++ + T++ L++G+C+A ++D A + M GF P S L+ C K
Sbjct: 387 ESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNA- 445
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+A+ ++ ++K GL P + Y LI+ LC +G +++A KV +M KG +Y+
Sbjct: 446 DAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATL 505
Query: 465 IDGYMKEGNVEMATMLRKEMFENQV 489
Y+ EG A+ M +NQ+
Sbjct: 506 AYTYLTEGKPVAASNTLDGMAKNQL 530
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 1/224 (0%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
V+ +M G PD ++ + L+ R A ++++EM + YN ++
Sbjct: 136 VFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNAMLHVCL 195
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ G+ ARAE M +GV ++ ++ YC+ G A+ V + M ++G +
Sbjct: 196 KAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTV 255
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
T LI LC RV EA + + P +Y LI G C G +EEA+K++ E
Sbjct: 256 TWNSLIHGLCKYGRVKEAAQLF-TEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGE 314
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
M G P + Y+A + ++G ++ L EM E +V+ +
Sbjct: 315 MEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQAD 358
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 85/206 (41%), Gaps = 1/206 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+V+ + T N L+ + + G V +M G + + ++Y L+ FC+ + + EA
Sbjct: 354 KVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEA 413
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++ + +M D + ++ ++ GFC+ E+ G+ + L+
Sbjct: 414 KEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRR 473
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
CR G VD A V++ M KG + L + + A + L + K L+
Sbjct: 474 LCRKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDG-MAKNQLYI 532
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQA 447
T + Y L +E + L V+A
Sbjct: 533 TPQIYNCLCTSYADEKETLNILWVRA 558
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 78/208 (37%), Gaps = 36/208 (17%)
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
S L+ V + R +A +++++MR + + D A ++ A A F EM
Sbjct: 118 SWLVLVLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMAR 177
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
+G+ S+ + +++ +AGD A
Sbjct: 178 AGLAVSTHVYNAMLHVCLKAGDAARA---------------------------------- 203
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+ L R+ G+ SY +I C++G EA+ V+ M +G +++ I
Sbjct: 204 --EALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLI 261
Query: 466 DGYMKEGNVEMATMLRKEMFENQVRQED 493
G K G V+ A L EM Q ++
Sbjct: 262 HGLCKYGRVKEAAQLFTEMAAAQATPDN 289
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 121/235 (51%), Gaps = 1/235 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +N ++ ++G ++ + EM GC PD SY+ ++ C +M EAE ++
Sbjct: 415 NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMF 474
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E + ++ V + + YNTII G A +EM L G V++ L+ C+
Sbjct: 475 ENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKD 534
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G+VD ++++ +M KG +P + +LI ELC +RRV +AL++ K +++ GL P +
Sbjct: 535 GNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK-QMLNQGLAPDIVT 593
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
Y LI GLC+ G M AL + ++ + P + Y+ I + K ++ A ML
Sbjct: 594 YNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAML 648
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 124/248 (50%), Gaps = 1/248 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV FN ++ G EG + +++ M GC+PD ++YS+LM C+ R+ A +L
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL 369
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM K +VV Y ++ FC+ G EM G+ +S + ++ C+
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 429
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G +D A+ + +M +G P+ + +I LC+ ++ EA + + +++ G+ +
Sbjct: 430 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE-NLLEEGVVANGIT 488
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I L +G+ ++A+++ EM+ G + Y+ I K+GNV+ + +L +EM
Sbjct: 489 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 548
Query: 486 ENQVRQED 493
E ++ +
Sbjct: 549 EKGIKPNN 556
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 118/242 (48%), Gaps = 9/242 (3%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V+TF+ ++ G G + + M GC P +Y L+ C R+ EA
Sbjct: 244 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA-- 301
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M + E +VV +NT+IGG G++A A E + MGL G + + T+ L++G C+
Sbjct: 302 --MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKL 359
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + SA+ + +M +KGF P T +++ C K +++ L + GL +
Sbjct: 360 GRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFC-KNGMWDDTRALLEEMSAKGLTLNSQG 418
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I LC++G+M+EA+ + EM +G P + Y+ I +E A + MF
Sbjct: 419 YNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEA----EHMF 474
Query: 486 EN 487
EN
Sbjct: 475 EN 476
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 16/291 (5%)
Query: 202 LIWEVSRGKGVISGYEIYREVFGL------DSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
L+ ++ R GV + Y V + +DA A + V R RV P TF
Sbjct: 125 LLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRD-RVPPTTFTFGVAAR 183
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
R G ++ + MAR GC PD Y ++ C++ + EA L EM
Sbjct: 184 ALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA 243
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
DV ++ ++ G C +G + A M G +T+ L+ G CR D A +
Sbjct: 244 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 303
Query: 376 NDMCRKGFEPEGSTI--EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
G PE + + +IG + ++ EA ++ + +K G P +Y L+ GL
Sbjct: 304 ------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLK-GCQPDAHTYSILMHGL 356
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
C+ G++ A+++ EM KGF P++ Y+ + + K G + L +EM
Sbjct: 357 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEM 407
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 77/131 (58%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V ++N L+ ++G ++ + EMA G +P+ SY++L++ C+ERR+R+A +L
Sbjct: 520 DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELS 579
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++M ++ + D+V YNT+I G C++G M A ++ V +T+ L++ +C+
Sbjct: 580 KQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKV 639
Query: 366 GDVDSAILVYN 376
+D A ++ N
Sbjct: 640 RLLDDAAMLLN 650
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+N ++ R+G ++ + EM GC D SY+ L+ C++ + + L
Sbjct: 485 NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLL 544
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EEM +K ++ + V+YN +I C+ + A E ++M G+ VT+ L+NG C+
Sbjct: 545 EEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKM 604
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
G + +A+ + + + P+ T +LI C R + +A +L
Sbjct: 605 GWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLN 650
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 179/390 (45%), Gaps = 39/390 (10%)
Query: 125 RDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETC---V 181
+ +I V RS L+LF+ + Y A F+ L+ C TC +
Sbjct: 148 QQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSC-----------TCANLL 196
Query: 182 DIVRMLMSR----GLSVKVSTCNALIWE-VSRGK--GVISGYE--IYREVFGLDSDATAG 232
D L+S+ G V+ N L+ + RG+ V++ +E I V+ D +
Sbjct: 197 DASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNV 256
Query: 233 IGKDVKRVVRVR---------------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
+ K V RV +V+ P+ T N L+ G R + +V + R G
Sbjct: 257 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDG 316
Query: 278 -CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
C P+ +++ +++ +C+ ++ +A ++ +M + + V YN +I G+ ++G++ A
Sbjct: 317 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 376
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
E +++M VTF L++GYCR G +D A+ +++DM + +P T ++I
Sbjct: 377 VEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHS 436
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC + R EA+ +L ++ + P Y +I LC+ GK++EA ++ M KG P
Sbjct: 437 LCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRP 496
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
Y+ I GY + + A M EM E
Sbjct: 497 DKYTYTILIIGYCMKSRISEAIMFFHEMVE 526
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 128/250 (51%), Gaps = 3/250 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM-REAEK 303
P+V +FN ++ G R G +K ++ M GC PD ++++L+ C + R E
Sbjct: 249 PDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEV 308
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L RD +VV + ++I G+C+ G++ A + +M SG+ ++VT+ L+NGY
Sbjct: 309 LRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYG 368
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ GD+ SA+ VY M R P+ T LI C ++ +AL I + + + + P
Sbjct: 369 KVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIW-SDMAQHRIQPNV 427
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEM-VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ +I LC++ + +EA+ + E+ + P IY+ ID K G V+ A ++RK
Sbjct: 428 YTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRK 487
Query: 483 EMFENQVRQE 492
M E R +
Sbjct: 488 GMEEKGCRPD 497
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 90/227 (39%), Gaps = 52/227 (22%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K+E + + +++ G+ T N LI + + S E+Y+++ L
Sbjct: 337 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRL---------- 386
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R P+V TF++L+ G+ R G + +W +MA+ +P+ Y++S+++ C++
Sbjct: 387 ------RCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQ 440
Query: 296 RRMREAEKLWEE------------------------------------MRDKNVEHDVVA 319
R EA L E M +K D
Sbjct: 441 NRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYT 500
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
Y +I G+C ++ A FF EM +G S+T ++ +AG
Sbjct: 501 YTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAG 547
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 131/244 (53%), Gaps = 10/244 (4%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++NAL+ G+ R G E+ + ++ EMA C PD +Y+ L+ FC R+ EA L E M
Sbjct: 296 SYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 355
Query: 309 RDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
+ ++ DVV Y+ ++ G+ A EF +EM V ++VT+ L++G C+AG
Sbjct: 356 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGR 415
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
V+ A+ V ++ +P+ T ++I LC R EAL +L+ V K + P+ ++
Sbjct: 416 VNHAMEVLKNV----DKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKR-VEPSVGTFN 470
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+I LC G M+EA K+ M G EP + Y+ ++G+ + G +E+A E+FE
Sbjct: 471 SVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAY----ELFEV 526
Query: 488 QVRQ 491
R+
Sbjct: 527 MRRK 530
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 128/247 (51%), Gaps = 6/247 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG--CEPDCYSYSVLMAVFCEERRMRE 300
V PN T+N ++ G + K +V EM R G PD +YS ++ FC++ M
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEM-RDGKSVAPDLVTYSTVINGFCKQGEMDR 63
Query: 301 AEKLWEEMRDKN-VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
A ++ EM ++ + DVV Y +++ G C G+M RA E REM L GVE TF L+
Sbjct: 64 ACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALI 123
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK--F 417
G+C A VD A+ +Y ++ + + LI LC +RR+ EA ++ + ++
Sbjct: 124 TGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDG 183
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P +Y LI G C+ G +E+A+K+ M G+ P++ YS+ + G K G+++ A
Sbjct: 184 AWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 243
Query: 478 TMLRKEM 484
L + M
Sbjct: 244 LDLFRRM 250
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 141/305 (46%), Gaps = 13/305 (4%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
N K++ + + + +++ + + +ALI + R + + YE+++E+ + A
Sbjct: 128 NARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAW-- 185
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+P+V T+ AL+ GF + G EK + M C P+ +YS L+
Sbjct: 186 -----------KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGL 234
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C+ + +A L+ M K +VV Y T+I G C ++ A EM + + +
Sbjct: 235 CKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADT 294
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
V++ L++GYCR G ++ A ++ +M K P+ T L+ C+ R+ EA +L+
Sbjct: 295 VSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLEN 354
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
G+ P +Y ++ G + EA + EM+ + P+ YS+ IDG K G
Sbjct: 355 MKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 414
Query: 473 NVEMA 477
V A
Sbjct: 415 RVNHA 419
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 122/251 (48%), Gaps = 6/251 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+++L+ G + G ++ D++ M GC P+ +Y+ L+ C ++ A L
Sbjct: 222 PNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLL 281
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EM D V+YN ++ G+C +G + A++ F+EM +T+ LV G+C
Sbjct: 282 MDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCN 341
Query: 365 AGDVDSA-ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
A ++ A L+ N G +P+ T +++ +R EA + ++ + + + P
Sbjct: 342 ASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR-NVAPNA 400
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI GLC+ G++ A++V + +P + Y+ I+G E A L +E
Sbjct: 401 VTYSSLIDGLCKAGRVNHAMEVLKNV----DKPDVVTYTIVIEGLCGTDRTEEALTLLEE 456
Query: 484 MFENQVRQEDG 494
M +V G
Sbjct: 457 MVNKRVEPSVG 467
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 176/424 (41%), Gaps = 67/424 (15%)
Query: 74 FSQIALGLKNNPHL--ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR-- 129
+S + GL L AL F K C ++ +Y T+IH L A + AR ++
Sbjct: 227 YSSLLHGLCKAGDLDQALDLFRRMTSKG-CVPNVVTYTTLIHGLCAAHKVDAARLLMDEM 285
Query: 130 VALRSPENDP----------KLKLFEVLVKTYRECGSAPFVFDLLIKCCL--EVKNIEKI 177
A P + +L E + ++E + + D + CL N ++
Sbjct: 286 TATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRL 345
Query: 178 ETCVDIV-RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
E ++ M + G+ V T + ++ SR K + E +E+ +
Sbjct: 346 EEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN---------- 395
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
V PN T+++L+ G + G +V + + PD +Y++++ C
Sbjct: 396 ------VAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTD 445
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
R EA L EEM +K VE V +N++IG C +G+M A + M G+E VT+
Sbjct: 446 RTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYT 505
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L+ G+ R G ++ A ++ M RK + +
Sbjct: 506 TLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAA--------------------------- 538
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
L P E+++ LI+GLC+ ++++A+ V E+ + EP+ E A +DG ++ G E
Sbjct: 539 -NLVP-EQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEE 596
Query: 477 ATML 480
A L
Sbjct: 597 AGKL 600
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 38/173 (21%)
Query: 320 YNTIIGGFCEIGEMARAEEFFREM--GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
YN ++ G C+ ++A E +EM G S V VT+ ++NG+C+ G++D
Sbjct: 12 YNVVVNGLCKARLTSKAYEVLKEMRDGKS-VAPDLVTYSTVINGFCKQGEMD-------- 62
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
A +IL+ V + G+ P +Y ++ GLC +G
Sbjct: 63 ---------------------------RACEILREMVTRDGMAPDVVTYTSVVDGLCRDG 95
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
KM+ A ++ EM KG EP +SA I G+ V+ A L KE+ + R
Sbjct: 96 KMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCR 148
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
RV P+V TFN+++ R G ++ + V MA G EP +Y+ L+ F RM A
Sbjct: 461 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 520
Query: 302 EKLWEEMRDKNVEHDVVA-------YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+L+E MR K + A ++ +I G C+ E+ +A E+ E +
Sbjct: 521 YELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEED 580
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
+V+G RAG + A + N + + G
Sbjct: 581 CLAIVDGLLRAGRTEEAGKLINSISKVGL 609
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
R+ P T V++ LC R +A ++LK + P +Y +I G C++G+M
Sbjct: 2 REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEM 61
Query: 440 EEALKVQAEMVGK-GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ A ++ EMV + G P + Y++ +DG ++G ++ A + +EM
Sbjct: 62 DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREM 107
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 127/233 (54%), Gaps = 1/233 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ P V+TF+ L+ F +EG ++ ++V+V M + +P+ +Y+ LM +C + +A
Sbjct: 274 NINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKA 333
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
E ++ M V DV +Y+ +I GFC+I + A + F EM + VT+ L++G
Sbjct: 334 ESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDG 393
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C++G + A+ + +M +G P T L+ LC V +A+++L ++ + P
Sbjct: 394 LCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELL-TKLKDHNIQP 452
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ +Y LI GLC+ G++++A KV +++ G+ + Y+ I G+ K+G V
Sbjct: 453 SVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 127/248 (51%), Gaps = 1/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VR +V +N ++ G ++ D + EM P +Y+ L+ C ++++A
Sbjct: 205 VRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAI 264
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +M +N+ V ++ ++ FC+ G++ A+ F M V+ + VT+ L+NGY
Sbjct: 265 GLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGY 324
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +V+ A ++N M + G P+ + ++I C + V EA+ + + K +FP
Sbjct: 325 CLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCK-QIFPD 383
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI GLC+ G++ ALK+ EM +G P++ Y++ +D K +V+ A L
Sbjct: 384 VVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLT 443
Query: 483 EMFENQVR 490
++ ++ ++
Sbjct: 444 KLKDHNIQ 451
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 118/276 (42%), Gaps = 34/276 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T L+ G +G K ++ LG + + SY L+ C+ + + A ++
Sbjct: 137 PDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEM 196
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ K V DVV YNTII G C+ + A +F+ EM + + VT+ L+ G C
Sbjct: 197 LRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCI 256
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI--------LKARVVK 416
G + AI + + M + P T +L+ C + +V EA ++ +K +V
Sbjct: 257 MGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVT 316
Query: 417 F--------------------------GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+ G+ P SY +I G C+ ++EA+K+ EM
Sbjct: 317 YNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMH 376
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
K P + Y++ IDG K G + A L EM +
Sbjct: 377 CKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHD 412
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 116/242 (47%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ N+ T + L+ F + G V+ + + G EPD + + L+ C + + +A
Sbjct: 100 IASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKAL 159
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ + + V+Y T+I G C++G+ A E R + V V + +++G
Sbjct: 160 HFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGV 219
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ V+ A Y++M K P T LI LC ++ +A+ +L +++ + PT
Sbjct: 220 CKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILE-NINPT 278
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ L+ C+EGK++EA V M+ K +P++ Y++ ++GY V A +
Sbjct: 279 VYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFN 338
Query: 483 EM 484
M
Sbjct: 339 TM 340
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 117/250 (46%), Gaps = 6/250 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ F ++ + + V + +M G + + S+L+ F + + +
Sbjct: 67 PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + K E D + T+I G C G++ +A F ++ G + + V++ L+NG C+
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +A+ + + K + +I +C + V +A D V K + PT
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAK-RICPTVV 245
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA-----TM 479
+Y LI GLC G++++A+ + +M+ + P++ +S +D + KEG V+ A M
Sbjct: 246 TYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVM 305
Query: 480 LRKEMFENQV 489
++K++ N V
Sbjct: 306 MKKDVKPNIV 315
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 1/182 (0%)
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
+ KN ++ + I+G + + R+M +G+ S+ VT L+N + + G
Sbjct: 60 LHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGH 119
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+ V++++ +KG+EP+ T+ LI LC K + +AL +V+ G + SY
Sbjct: 120 NSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALH-FHDKVLALGFQLNQVSYR 178
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
LI GLC+ G+ + AL++ + GK + +Y+ IDG K+ V A EM
Sbjct: 179 TLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAK 238
Query: 488 QV 489
++
Sbjct: 239 RI 240
>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 140/542 (25%), Positives = 219/542 (40%), Gaps = 118/542 (21%)
Query: 1 MAVQILKHIIFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNH 60
+AV + I+ + K PQ L F +S P S + ++ L R H
Sbjct: 10 LAVPTHERIVHLILDQKSAPQALQTFEWASKLPNFTHSQSTYRALIHKLLTFRRFHTVQH 69
Query: 61 LLS-LCRS-GLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRA 118
LL + +S GL P + S + TII L RA
Sbjct: 70 LLDEMPKSIGLPPDE--------------------------------SIFLTIIRGLGRA 97
Query: 119 RLIGPARDVIRV---ALRSPENDPKLKLF----EVLVKT--------YRE--CGSA---- 157
R+I RDVI+V R +N P LK+F +VLVK YR+ G+
Sbjct: 98 RMI---RDVIKVLDLVTRYGKN-PSLKIFNSILDVLVKEDIDLARKFYRKKMMGAGIQGD 153
Query: 158 PFVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGY 216
+ + +L+K CL +I +++++ SRGL V N L+ + V
Sbjct: 154 DYTYGILMKGLCLT----NRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRAR 209
Query: 217 EIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+ E+ PN TFN L+ G+ +E F + + + L
Sbjct: 210 SLMNEI--------------------KEPNDVTFNVLICGYCKEDNFVQALVLLEKSFSL 249
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G PD + + ++ + C R+ EA ++ E + K DVVA+NT+I GFC+ G++
Sbjct: 250 GFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLG 309
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+EM G ++ T+ L++G+C +G ++SA+ ++NDM G T + LI
Sbjct: 310 HGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKG 369
Query: 397 LCDKRRVFEALDILKA---------------RVVKFG-------------------LFPT 422
L + R + IL+ V +G LFP
Sbjct: 370 LFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALEFLMKMENLFPR 429
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
I G CEEG ++EA +V +M +G PS +Y I G+ +EG V A L
Sbjct: 430 AVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMN 489
Query: 483 EM 484
EM
Sbjct: 490 EM 491
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 93/176 (52%), Gaps = 3/176 (1%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ +N+++ G YR+ + + ++M L P S+ + FCEE ++EA++++
Sbjct: 396 SISPYNSVLYGLYRKNMLNEALEFLMKMENL--FPRAVDRSLRILGFCEEGAIQEAKRVY 453
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++M ++ + Y+ +I GFC+ G + A E EM G + TF L++G+CR
Sbjct: 454 DQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFPVASTFNALISGFCRL 513
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
G SA+ + DM +G P+ + LI LC K+ +A +L ++V+ G+ P
Sbjct: 514 GKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLL-LQMVENGITP 568
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%)
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
++GF EGA ++ + V+ +M G P Y L+ FC+E +REA +L EM
Sbjct: 437 ILGFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGY 496
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
+N +I GFC +G+ A + +M G + ++ L++ CR A
Sbjct: 497 FPVASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAAS 556
Query: 374 VYNDMCRKGFEPE 386
+ M G P+
Sbjct: 557 LLLQMVENGITPD 569
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P TFNAL+ GF R G + +M GC PD SYS L+ C ++ ++A L
Sbjct: 498 PVASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASL 557
Query: 305 WEEMRDKNVEHDVVAYNTI 323
+M + + D + +N++
Sbjct: 558 LLQMVENGITPDYLIWNSL 576
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 10/180 (5%)
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS-GVESSSVTFEHLVNGYCRAGDVDS 370
N H Y +I + EM S G+ F ++ G RA +
Sbjct: 43 NFTHSQSTYRALIHKLLTFRRFHTVQHLLDEMPKSIGLPPDESIFLTIIRGLGRARMIRD 102
Query: 371 AILVYNDMCRKGFEPE----GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
I V + + R G P S ++VL+ E D R F + +++ G+ + +Y
Sbjct: 103 VIKVLDLVTRYGKNPSLKIFNSILDVLVKEDIDLARKF-----YRKKMMGAGIQGDDYTY 157
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
L+KGLC ++ E K+ + +G +P++ IY+ + G V A L E+ E
Sbjct: 158 GILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE 217
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
F ST LI +L RR +L GL P E ++ +I+GL + +
Sbjct: 44 FTHSQSTYRALIHKLLTFRRFHTVQHLLDEMPKSIGLPPDESIFLTIIRGLGRARMIRDV 103
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA-TMLRKEMFENQVRQED 493
+KV + G PSL+I+++ +D +KE ++++A RK+M ++ +D
Sbjct: 104 IKVLDLVTRYGKNPSLKIFNSILDVLVKE-DIDLARKFYRKKMMGAGIQGDD 154
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 169/369 (45%), Gaps = 33/369 (8%)
Query: 150 TYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG 209
T R C P ++ ++I+ + + ++ L ++G ++ CN +I +
Sbjct: 143 TSRSCVPIPPMYHVIIESACRSGGYS---SALRVLEALHAKGSTLDTGNCNLVINAICDQ 199
Query: 210 KGVISGYEIYREV--FGLDSD-----------ATAGIGKDVKRV----VRVR-------- 244
V G E+ R++ FG ++D A DV+ + V+V
Sbjct: 200 GCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQ 259
Query: 245 ----PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
P++ + ++ G +EG E ++ M G +P+ Y+ ++ C R +
Sbjct: 260 HGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEK 319
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
AE+L EM KN D V +N ++ FC+ G + R E +M G +T+ ++N
Sbjct: 320 AEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVIN 379
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G+C+ G +D A+++ +M G +P + +++ LC R +A +++ +R+++ G
Sbjct: 380 GFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELM-SRMIQQGCL 438
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P ++ +I LC++G +E+A+++ +M+ G P L YS IDG K G E A L
Sbjct: 439 PNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALEL 498
Query: 481 RKEMFENQV 489
M +
Sbjct: 499 LNVMINKGI 507
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 125/245 (51%), Gaps = 5/245 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV +N ++ G +EK E++ EM + C D ++++L+ FC+ +
Sbjct: 297 LKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVI 356
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L E+M + DV+ Y T+I GFC+ G + A + M G + +++++ ++ G
Sbjct: 357 ELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGL 416
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C A + + M ++G P T +I LC K V +A+++LK +V G P
Sbjct: 417 CSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVN-GCNPD 475
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY +I GL + GK EEAL++ M+ KG P++ YS+ +EG ++
Sbjct: 476 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVI---- 531
Query: 483 EMFEN 487
+MF+N
Sbjct: 532 QMFDN 536
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 109/228 (47%), Gaps = 1/228 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ ++ GF +EG ++ + M GC+P+ SY++++ C R +AE+L
Sbjct: 369 PDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEEL 428
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M + + V +NTII C+ G + +A E ++M ++G +++ +++G +
Sbjct: 429 MSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGK 488
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG + A+ + N M KG P T + L + R+ + + + + +
Sbjct: 489 AGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFD-NIQDATIRSDAV 547
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
Y +I LC+ + + A+ A MV G P+ Y+A I G EG
Sbjct: 548 LYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEG 595
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 1/239 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
TFN L+ F + G ++V ++ +M GC PD +Y+ ++ FC+E + EA L + M
Sbjct: 338 TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNM 397
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + ++Y ++ G C AEE M G + VTF ++N C+ G V
Sbjct: 398 PSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLV 457
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ AI + M G P+ + +I L + EAL++L + K G+ P +Y
Sbjct: 458 EQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINK-GITPNVITYSS 516
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ L EG++++ +++ + +Y+A I K ++A M N
Sbjct: 517 MAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSN 575
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 101/209 (48%), Gaps = 1/209 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN ++ ++ G + E++ M + GC P+ +++ ++ C++ + +A +
Sbjct: 403 KPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIE 462
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L ++M D+++Y+T+I G + G+ A E M G+ + +T+ +
Sbjct: 463 LLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALA 522
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G +D I +++++ + +I LC +R A+D L A +V G P E
Sbjct: 523 REGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFL-AYMVSNGCMPNE 581
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
+Y LIKGL EG + EA + +E+ +
Sbjct: 582 STYTALIKGLASEGLLCEAQDLLSELCSR 610
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 115/289 (39%), Gaps = 46/289 (15%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V PN +T+ ++ G G V EM C P Y V++ C
Sbjct: 110 VPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSS 169
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A ++ E + K D N +I C+ G + E R++ L G E+ V++ ++
Sbjct: 170 ALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLK 229
Query: 361 GYCRA---GDV----DSAILVY---NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
G C A GDV D + V+ + M + G P+ +I +C + A +IL
Sbjct: 230 GLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEIL 289
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK------------------ 452
+R+ +GL P Y ++KG+C + E+A ++ EM K
Sbjct: 290 -SRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQ 348
Query: 453 -----------------GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G P + Y+ I+G+ KEG ++ A ML K M
Sbjct: 349 NGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNM 397
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 52/244 (21%)
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
S L+ C R +A + + + VV YN ++ G+C +G++ A R
Sbjct: 56 SALIRSLCVAGRTADAVRALDAAGNA---AGVVDYNAMVAGYCRVGQVEAAR---RLAAA 109
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM-------------------CRKG---- 382
V ++ T+ +V G C G + A+ V ++M CR G
Sbjct: 110 VPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSS 169
Query: 383 -------FEPEGSTIE-----VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
+GST++ ++I +CD+ V E L++L+ ++ FG SY ++
Sbjct: 170 ALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLR-KLPLFGCEADIVSYNAVL 228
Query: 431 KGLCE-------EGKMEEALKVQ---AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
KGLC E M+E +KV ++M G P + +Y+ IDG KEG+ E+A +
Sbjct: 229 KGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEI 288
Query: 481 RKEM 484
M
Sbjct: 289 LSRM 292
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 121/235 (51%), Gaps = 1/235 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +N ++ ++G ++ + EM GC PD SY+ ++ C +M EAE ++
Sbjct: 399 NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMF 458
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E + ++ V + + YNTII G A +EM L G V++ L+ C+
Sbjct: 459 ENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKD 518
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G+VD ++++ +M KG +P + +LI ELC +RRV +AL++ K +++ GL P +
Sbjct: 519 GNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK-QMLNQGLAPDIVT 577
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
Y LI GLC+ G M AL + ++ + P + Y+ I + K ++ A ML
Sbjct: 578 YNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAML 632
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 124/248 (50%), Gaps = 1/248 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV FN ++ G EG + +++ M GC+PD ++YS+LM C+ R+ A +L
Sbjct: 294 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL 353
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM K +VV Y ++ FC+ G EM G+ +S + ++ C+
Sbjct: 354 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 413
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G +D A+ + +M +G P+ + +I LC+ ++ EA + + +++ G+ +
Sbjct: 414 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE-NLLEEGVVANGIT 472
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I L +G+ ++A+++ EM+ G + Y+ I K+GNV+ + +L +EM
Sbjct: 473 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 532
Query: 486 ENQVRQED 493
E ++ +
Sbjct: 533 EKGIKPNN 540
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 118/242 (48%), Gaps = 9/242 (3%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V+TF+ ++ G G + + M GC P +Y L+ C R+ EA
Sbjct: 228 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA-- 285
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M + E +VV +NT+IGG G++A A E + MGL G + + T+ L++G C+
Sbjct: 286 --MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKL 343
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + SA+ + +M +KGF P T +++ C K +++ L + GL +
Sbjct: 344 GRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFC-KNGMWDDTRALLEEMSAKGLTLNSQG 402
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I LC++G+M+EA+ + EM +G P + Y+ I +E A + MF
Sbjct: 403 YNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEA----EHMF 458
Query: 486 EN 487
EN
Sbjct: 459 EN 460
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 9/245 (3%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
RV P TF R G ++ + MAR GC PD Y ++ C++ + EA
Sbjct: 154 RVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEA 213
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L EM DV ++ ++ G C +G + A M G +T+ L+ G
Sbjct: 214 ATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQG 273
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTI--EVLIGELCDKRRVFEALDILKARVVKFGL 419
CR D A + G PE + + +IG + ++ EA ++ + +K G
Sbjct: 274 LCRVRQADEARAML------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLK-GC 326
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y L+ GLC+ G++ A+++ EM KGF P++ Y+ + + K G +
Sbjct: 327 QPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRA 386
Query: 480 LRKEM 484
L +EM
Sbjct: 387 LLEEM 391
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 77/131 (58%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V ++N L+ ++G ++ + EMA G +P+ SY++L++ C+ERR+R+A +L
Sbjct: 504 DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELS 563
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++M ++ + D+V YNT+I G C++G M A ++ V +T+ L++ +C+
Sbjct: 564 KQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKV 623
Query: 366 GDVDSAILVYN 376
+D A ++ N
Sbjct: 624 RLLDDAAMLLN 634
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+N ++ R+G ++ + EM GC D SY+ L+ C++ + + L
Sbjct: 469 NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLL 528
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EEM +K ++ + V+YN +I C+ + A E ++M G+ VT+ L+NG C+
Sbjct: 529 EEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKM 588
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
G + +A+ + + + P+ T +LI C R + +A +L
Sbjct: 589 GWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLN 634
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 126/244 (51%), Gaps = 1/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V T+N+L+ G +++ EM GC PD ++Y++L+ C +++EA
Sbjct: 402 ILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEAL 461
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM +V+ YNT+I GFC+ +A AEE F +M L GV +SVT+ L++G
Sbjct: 462 NLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGL 521
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++ V+ A + + M +G P+ T L+ C + +A DI++ + G P
Sbjct: 522 CKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQT-MASDGCEPD 580
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI GLC+ G++E A K+ + KG + Y+ I + + A L +
Sbjct: 581 IVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFR 640
Query: 483 EMFE 486
EM E
Sbjct: 641 EMIE 644
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 125/248 (50%), Gaps = 1/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +TFN L+ G + G + +V M R G +PD Y+Y+ L++ C+ + EA K+
Sbjct: 299 PDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKV 358
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M +++ + V YNTII C+ ++ A + + G+ T+ L+ G C
Sbjct: 359 LNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCL 418
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ + A+ +Y +M KG P+ T +LI LC + ++ EAL++LK V G
Sbjct: 419 SRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVS-GCARNVI 477
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C+ ++ EA ++ +M +G + Y+ IDG K VE A+ L +M
Sbjct: 478 TYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQM 537
Query: 485 FENQVRQE 492
+R +
Sbjct: 538 IMEGLRPD 545
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 118/515 (22%), Positives = 206/515 (40%), Gaps = 92/515 (17%)
Query: 30 SSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLAL 89
+S P+ S AT T+H + + + TPTQ +L + + +
Sbjct: 20 ASHKPTSNSTLSFAT-----TNHEPLTTTTNSATRLSPNFTPTQLLH-SLRREEDSSAVI 73
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR---VALRSPENDPKLKLFEV 146
F + + K S S + ++H L +A +D+++ ++L +ND L V
Sbjct: 74 HLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLL----V 129
Query: 147 LVKTYRECG-------------------SAPFVFDLLIKCCLEVKNIEKIETCVDIVRML 187
+++Y G + ++ L+ ++ ++ +E +
Sbjct: 130 FIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHS---NM 186
Query: 188 MSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATAGIGKDVKRVVRVRP 245
+SRG+ VST N LI + R + + E+ FGL P
Sbjct: 187 VSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGL------------------LP 228
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+ TF +M GF EG + V +M GC + +VL+ FC+E R+ EA +
Sbjct: 229 DEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFI 288
Query: 306 EEM---------------------RDKNVEH---------------DVVAYNTIIGGFCE 329
EEM + +V+H D+ YN++I G C+
Sbjct: 289 EEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCK 348
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
+GE+ A + +M ++VT+ +++ C+ V+ A + + KG P+ T
Sbjct: 349 LGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCT 408
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
LI LC R A+++ K K G P E +Y LI LC GK++EAL + EM
Sbjct: 409 YNSLIQGLCLSRNHTVAMELYKEMKTK-GCHPDEFTYNMLIDSLCFRGKLQEALNLLKEM 467
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G ++ Y+ IDG+ K + A + +M
Sbjct: 468 EVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQM 502
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 161/353 (45%), Gaps = 28/353 (7%)
Query: 136 ENDPKLKLFEVLVKTYRECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSV 194
E D +K+ +++ R+C ++ +I C E ++E + +L +G+
Sbjct: 351 EVDEAVKVLNQMIE--RDCSPNTVTYNTIISTLCKE----NQVEEATKLALVLTGKGILP 404
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREV-----------FGLDSDATAGIGKDVKRVVRV 243
V T N+LI + + E+Y+E+ + + D+ GK + + +
Sbjct: 405 DVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLL 464
Query: 244 RP--------NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ NV T+N L+ GF + + E+++ +M G + +Y+ L+ C+
Sbjct: 465 KEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKS 524
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ EA +L ++M + + D YN+++ FC+ G++ +A + + M G E VT+
Sbjct: 525 ERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTY 584
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+ G C+AG V++A + + KG +I L ++R EA+ + + +
Sbjct: 585 GTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIE 644
Query: 416 KFGLFPTEKSYMFLIKGLCE-EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
K P +Y + +GLC+ G + EA+ EM+ +G+ P + +G
Sbjct: 645 K-AEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEG 696
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 124/260 (47%), Gaps = 12/260 (4%)
Query: 235 KDVKRVVRVRPNVHTFNALMV--------GFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
KD+ + +++ +V ++L+V G Y E + V+ + VE G + + Y+
Sbjct: 109 KDILKEMKISLSVIDNDSLLVFIESYASFGLYNE-ILQFVDAMEVE---FGVVANTHFYN 164
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L+ V + +++ E M + + DV +N +I C ++ A EM
Sbjct: 165 FLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDF 224
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+ TF ++ G+ G++D A+ V M G T+ VL+ C + R+ EA
Sbjct: 225 GLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEA 284
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L ++ ++ G FP + ++ L+ GL + G ++ AL+V M+ +GF+P + Y++ I
Sbjct: 285 LRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLIS 344
Query: 467 GYMKEGNVEMATMLRKEMFE 486
G K G V+ A + +M E
Sbjct: 345 GLCKLGEVDEAVKVLNQMIE 364
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 128/295 (43%), Gaps = 28/295 (9%)
Query: 146 VLVKTYRE-----CGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC 199
V ++ Y+E C F +++LI C K++ +++++ + G + V T
Sbjct: 424 VAMELYKEMKTKGCHPDEFTYNMLIDSLCFR----GKLQEALNLLKEMEVSGCARNVITY 479
Query: 200 NALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYR 259
N LI + K + EI+ D + V N T+N L+ G +
Sbjct: 480 NTLIDGFCKNKRIAEAEEIF----------------DQMELQGVSRNSVTYNTLIDGLCK 523
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
E+ + +M G PD ++Y+ L+ FC+ +++A + + M E D+V
Sbjct: 524 SERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVT 583
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
Y T+I G C+ G + A + R + + G+ + + ++ R A+ ++ +M
Sbjct: 584 YGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMI 643
Query: 380 RKGFEPEGSTIEVLIGELCD-KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
K P+ T +++ LC + EA+D + +++ G P S+ L +GL
Sbjct: 644 EKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFV-MEMLERGYVPEFSSFYMLAEGL 697
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 235/527 (44%), Gaps = 96/527 (18%)
Query: 27 STSSSTPPSDQSHNLIATVVSLLTHHRSKSRWN----HLLSLCRSG-LTPTQ-FSQIALG 80
STS++ P + N + + SL TH + N L C++G +T T L
Sbjct: 3 STSNTVPSASSIRN--SNLSSLFTHSSAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLM 60
Query: 81 LKNNPHLALRFFSFTQHKSLCKHSLSSYATIIH------ILSRARLIGPARD--VIRVAL 132
+++ P +L F+ H LS A I H + ++ RL G + D + + L
Sbjct: 61 MRSTPTPSLSSFN---------HLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111
Query: 133 RSPENDPKLKL-FEVLVKTYRECGSAPFV--FDLLIK-CCLEVKNIEKIETCVDIVRMLM 188
N +L+ F R G +P + ++ LIK C+E +I + +
Sbjct: 112 NCLCNVNRLREGFAAFAGILRR-GYSPNIVTYNTLIKGLCME----HRISEATRLFLRMQ 166
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV-VRVRPNV 247
G + V T LI + + ++++E+ D+ R + +PNV
Sbjct: 167 KLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEML-----------NDISRYEINCKPNV 215
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLG----------CEPDCYSYSVLMAVFCEERR 297
T+N ++ G + G ++ + ++ EM G +PD +++VL+ C+E +
Sbjct: 216 ITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGK 275
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ EA+KL M + + D+V YN++I GFC +G++ A E F M G E +++
Sbjct: 276 VIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNV 335
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFEALDILK 411
L+NGY + V+ A+ +YN+M G P T + L+ G++ D +++F ++K
Sbjct: 336 LINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFS---VMK 392
Query: 412 ARVV-----KFG-----------------LFPTEKSYMF---------LIKGLCEEGKME 440
A + +G LF KS F LI GLC+ GK+E
Sbjct: 393 AHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLE 452
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
A ++ ++ +G EP++ Y+ I G+ +EG V+ A +L ++M N
Sbjct: 453 TAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEAN 499
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 125/250 (50%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N+L+ GF G +++V M GCEPD SY+VL+ + + ++ EA
Sbjct: 291 IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAM 350
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL+ EM +V+ Y++++ G G++ A++ F M G+ +S T+ ++G
Sbjct: 351 KLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGL 410
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ + A+ ++ ++ F+ E + LI LC ++ A ++ + ++ G P
Sbjct: 411 CKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE-KLSNEGHEPN 469
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I G C EG++++A + +M G P + Y+ + G+ + +E L
Sbjct: 470 VVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLH 529
Query: 483 EMFENQVRQE 492
M + V +
Sbjct: 530 RMAQKDVSPD 539
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 128/299 (42%), Gaps = 52/299 (17%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+N L+ G E + +++ M +LGC PD +Y L+ C + A KL
Sbjct: 137 PNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKL 196
Query: 305 WEEMRDK------NVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-------------GL 345
+EM + N + +V+ YN I+ G C++G A++ F EM GL
Sbjct: 197 HQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGL 256
Query: 346 --------------------------------SGVESSSVTFEHLVNGYCRAGDVDSAIL 373
SG+ VT+ L+ G+C GD++SA
Sbjct: 257 QPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARE 316
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
++ M KG EP+ + VLI +V EA+ + ++ G P +Y L+KG+
Sbjct: 317 LFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLL-VGKRPNVITYDSLLKGI 375
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
GK+++A K+ + M G + Y F+DG K + A L E+ + + E
Sbjct: 376 FLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLE 434
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 121/257 (47%), Gaps = 17/257 (6%)
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVH 248
S+G V + N LI S+ V ++Y E+ +V RPNV
Sbjct: 323 SKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEML----------------LVGKRPNVI 366
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+++L+ G + G + + ++ M G + Y+Y + + C+ + EA KL+ E+
Sbjct: 367 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 426
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ N + ++ N +I G C+ G++ A E F ++ G E + VT+ +++G+CR G V
Sbjct: 427 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 486
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D A ++ M G P+ T L+ + ++ E + +L R+ + + P +
Sbjct: 487 DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLH-RMAQKDVSPDAITCSI 545
Query: 429 LIKGLCEEGKMEEALKV 445
++ L ++ K +E L +
Sbjct: 546 VVDMLSKDEKYQECLHL 562
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 3/167 (1%)
Query: 328 CEIGEMA--RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
C+ G + A FF M S S +F HL++G + +YN M G
Sbjct: 43 CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+ T+ +L+ LC+ R+ E A +++ G P +Y LIKGLC E ++ EA ++
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAF-AGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL 161
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
M G P + Y I G GN+ +A L +EM + R E
Sbjct: 162 FLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYE 208
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 131/260 (50%), Gaps = 3/260 (1%)
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
G+ V R V + V T+N + + EG + + EM G PD ++Y++L+ +C
Sbjct: 243 GEMVDRGVSM--TVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYC 300
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+E + ++A K++E M K + VV Y ++I G + + F + G+
Sbjct: 301 KEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLF 360
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
+ L+N +C GD+D A + +M +K P+ T L+ LC R+ EA +++
Sbjct: 361 MYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIE-E 419
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+ K G+ P SY LI G +G +++A+KV+ EM+GKGF P+L Y+A I G G
Sbjct: 420 MTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQ 479
Query: 474 VEMATMLRKEMFENQVRQED 493
A L KEM N + +D
Sbjct: 480 GGDAEDLVKEMVGNGITPDD 499
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 143/332 (43%), Gaps = 85/332 (25%)
Query: 234 GKDVKRVVRVR----PNVHTFNALMVGFYREGAFEKVEDVWVEM-ARLGCEPDCYSYSVL 288
GK V+ + +R PN T+N ++ GF G + ++ EM R G PD Y+Y+ +
Sbjct: 130 GKPVRALELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATV 189
Query: 289 MAVFCEERRMREAEKLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEM-------------- 333
++ +C+ ++ +A K+++EM + VE + V YN +IGG+C+ G +
Sbjct: 190 ISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRG 249
Query: 334 ---------------------ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
A A EMG G+ + T+ L+NGYC+ G A+
Sbjct: 250 VSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAM 309
Query: 373 -----------------------------------LVYNDMCRKGFEPEGSTIEVLIGEL 397
++ND R+G P+ LI
Sbjct: 310 KMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSH 369
Query: 398 C---DKRRVFEAL-DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
C D R FE + ++ K R+ P + +Y L++GLC G+++EA + EM +G
Sbjct: 370 CTGGDMDRAFEIMGEMEKKRIT-----PDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRG 424
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+P L Y+ I GY +G+++ A +R EM
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDAVKVRDEMM 456
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 1/194 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+R V T+ +L+ +G ++ + ++ + R G PD + Y+ L+ C M A
Sbjct: 320 IRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAF 379
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ EM K + D V YNT++ G C +G + A EM G++ V++ L++GY
Sbjct: 380 EIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGY 439
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
GD+ A+ V ++M KGF P T +I LC + +A D++K +V G+ P
Sbjct: 440 SMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVK-EMVGNGITPD 498
Query: 423 EKSYMFLIKGLCEE 436
+ +Y+ LI+GL E
Sbjct: 499 DSTYISLIEGLTTE 512
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 7/224 (3%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
++ ++ RL ++++++ C + A +L +M N V YNT+I GFC
Sbjct: 103 LFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPSPNA----VTYNTVIAGFC 158
Query: 329 EIGEMARAEEFFREM-GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG-FEPE 386
G + E REM G+ T+ +++G+C+ G V+ A V+++M +G EP
Sbjct: 159 ARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPN 218
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
LIG CD+ + AL + +V G+ T +Y + L EG+ EA +
Sbjct: 219 AVMYNALIGGYCDQGNLEVALRY-RGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALV 277
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
EM KG P Y+ I+GY KEG + A + + M +R
Sbjct: 278 EEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIR 321
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 128/269 (47%), Gaps = 23/269 (8%)
Query: 147 LVKTYRECGSAP--FVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
LV+ E G AP F +++LI C E K + + + +++ +G+ V T +LI
Sbjct: 276 LVEEMGEKGLAPDAFTYNILINGYCKEGKE----KKAMKMFEVMVGKGIRATVVTYTSLI 331
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
+S KG++ +E L +DA V+R +RP++ +NAL+ G
Sbjct: 332 HALSM-KGMV------QETDRLFNDA-------VRR--GIRPDLFMYNALINSHCTGGDM 375
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
++ ++ EM + PD +Y+ LM C R+ EA L EEM + ++ D+V+YNT+
Sbjct: 376 DRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTL 435
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I G+ G++ A + EM G + +T+ ++ G C G A + +M G
Sbjct: 436 ISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGI 495
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKA 412
P+ ST LI L + A D +KA
Sbjct: 496 TPDDSTYISLIEGLTTEDERLAAGDDVKA 524
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 121/235 (51%), Gaps = 1/235 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +N ++ ++G ++ + EM GC PD SY+ ++ C +M EAE ++
Sbjct: 415 NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMF 474
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E + ++ V + + YNTII G A +EM L G V++ L+ C+
Sbjct: 475 ENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKD 534
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G+VD ++++ +M KG +P + +LI ELC +RRV +AL++ K +++ GL P +
Sbjct: 535 GNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK-QMLNQGLAPDIVT 593
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
Y LI GLC+ G M AL + ++ + P + Y+ I + K ++ A ML
Sbjct: 594 YNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAML 648
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 124/248 (50%), Gaps = 1/248 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV FN ++ G EG + +++ M GC+PD ++YS+LM C+ R+ A +L
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLL 369
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM K +VV Y ++ FC+ G EM G+ +S + ++ C+
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 429
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G +D A+ + +M +G P+ + +I LC+ ++ EA + + +++ G+ +
Sbjct: 430 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE-NLLEEGVVANGIT 488
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I L +G+ ++A+++ EM+ G + Y+ I K+GNV+ + +L +EM
Sbjct: 489 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 548
Query: 486 ENQVRQED 493
E ++ +
Sbjct: 549 EKGIKPNN 556
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 9/246 (3%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V+TF+ ++ G G + + M GC P +Y L+ C R+ EA
Sbjct: 244 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA-- 301
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M + E +VV +NT+IGG G++A A E + MGL G + + T+ L++G C+
Sbjct: 302 --MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKL 359
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + SA+ + +M +KGF P T +++ C K +++ L + GL +
Sbjct: 360 GRISSAVRLLREMEKKGFAPNVVTYTIVLHSFC-KNGMWDDTRALLEEMSAKGLTLNSQG 418
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I LC++G+M+EA+ + EM +G P + Y+ I +E A + MF
Sbjct: 419 YNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEA----EHMF 474
Query: 486 ENQVRQ 491
EN + +
Sbjct: 475 ENLLEE 480
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 16/291 (5%)
Query: 202 LIWEVSRGKGVISGYEIYREVFGL------DSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
L+ ++ R GV + Y V + +DA A + V R RV P TF
Sbjct: 125 LLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRD-RVPPTTFTFGVAAR 183
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
R G + + MAR GC PD Y ++ C++ + EA L EM
Sbjct: 184 ALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA 243
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
DV ++ ++ G C +G + A M G +T+ L+ G CR D A +
Sbjct: 244 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 303
Query: 376 NDMCRKGFEPEGSTI--EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
G PE + + +IG + ++ EA ++ + +K G P +Y L+ GL
Sbjct: 304 ------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLK-GCQPDAHTYSILMHGL 356
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
C+ G++ A+++ EM KGF P++ Y+ + + K G + L +EM
Sbjct: 357 CKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEM 407
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 77/131 (58%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V ++N L+ ++G ++ + EMA G +P+ SY++L++ C+ERR+R+A +L
Sbjct: 520 DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELS 579
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++M ++ + D+V YNT+I G C++G M A ++ V +T+ L++ +C+
Sbjct: 580 KQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKV 639
Query: 366 GDVDSAILVYN 376
+D A ++ N
Sbjct: 640 RLLDDAAMLLN 650
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V N T+N ++ R+G ++ + EM GC D SY+ L+ C++ + +
Sbjct: 482 VVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSL 541
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EEM +K ++ + V+YN +I C+ + A E ++M G+ VT+ L+NG
Sbjct: 542 VLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
C+ G + +A+ + + + P+ T +LI C R + +A +L
Sbjct: 602 CKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLN 650
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 199/465 (42%), Gaps = 53/465 (11%)
Query: 28 TSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTP--TQFSQIALGLKNNP 85
T S PP+ ++N + +S + L S+ G TP + ++ + GL
Sbjct: 590 THSIHPPNLITYNTVLDCLS--KNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEE 647
Query: 86 HLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFE 145
F F Q K + ++ TI+ + L+ A ++ E
Sbjct: 648 RFEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVK---------------E 692
Query: 146 VLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWE 205
++K +C + F L++ L +EK ++ + SRG+ + LI
Sbjct: 693 YILKA--DCNTDKSSFHSLMEGILNKAGVEK---SIEFAENIASRGILLNDFFLCPLIRH 747
Query: 206 VSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEK 265
+ + K + ++++ + GL G ++N+L+ G E +
Sbjct: 748 LCKHKKALEAHQLFNKFKGLGVSLKTG----------------SYNSLIRGLVDENLIDI 791
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
ED++ EM RLGC PD ++Y++++ + R+ E ++ EM K E V YNTII
Sbjct: 792 AEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIIS 851
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
G + + +A + + + G + T+ L++G +AG + A ++N+M G +P
Sbjct: 852 GLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKP 911
Query: 386 EGSTIEVLI------GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+ +L+ G + ++FE ++V+ G+ P KSY LI LC G++
Sbjct: 912 NCTIYNILLNGHRIAGNTENVCQIFE-------KMVEQGINPDIKSYTVLIDTLCTAGRL 964
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ L +++ G EP L IY+ IDG K +E A L EM
Sbjct: 965 NDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEM 1009
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 162/379 (42%), Gaps = 34/379 (8%)
Query: 110 TIIHILSRARLIGPARDVIRVALRSP---ENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+++H+L A A ++ A R P L++ + G VFDL+ K
Sbjct: 77 SVVHMLRSAPGPAEALELFTAAARQPTAVHTTESCNYMLELMRAHGRVGDMAQVFDLMQK 136
Query: 167 CCLEVKNIEKIETCVDIV-------------RMLMSRGLSVKVSTCNALIWEVSRGKGVI 213
++ N+ T V ++ G+S+ T N LI+ + +
Sbjct: 137 QIVKA-NVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDA 195
Query: 214 SGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
E+Y+ + D + P+V T++ LMV F ++ + V + EM
Sbjct: 196 EAMEVYKAMV---EDG-------------ISPSVRTYSVLMVSFGKKRDVDTVLWLLNEM 239
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
G +P+ YSY++ + V + R EA ++ +M D + DVV + +I C+ G +
Sbjct: 240 EARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRL 299
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+ A++ F +M S + VT+ L++ +GD S + ++N M G+ + +
Sbjct: 300 SDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAV 359
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ LC R+ EAL + K G+ P + SY LI G + + AL++ M G
Sbjct: 360 VDALCQVGRLDEALAVFDEMKEK-GISPEQYSYNSLISGFLKADMFDRALELFNHMNACG 418
Query: 454 FEPSLEIYSAFIDGYMKEG 472
P+ + FI+ Y K G
Sbjct: 419 PSPNGYTHVLFINYYGKSG 437
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 116/244 (47%), Gaps = 1/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P +++N+L+ GF + F++ +++ M G P+ Y++ + + + + + +A
Sbjct: 384 ISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAI 443
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +E M+ K + DV A N ++ G + A+ F E+ GV ++T+ ++
Sbjct: 444 QRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCC 503
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+A D A+ ++DM G P+ + LI L + EA + ++ + + PT
Sbjct: 504 SKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFH-QLKEMKIEPT 562
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ GL EGK++E + + EM P+L Y+ +D K G V A +
Sbjct: 563 NGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLY 622
Query: 483 EMFE 486
M E
Sbjct: 623 SMTE 626
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 1/251 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ T+ L+ G + V ++W M G + SY+ ++ C+ R+ EA
Sbjct: 315 KPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALA 374
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+++EM++K + + +YN++I GF + RA E F M G + T +N Y
Sbjct: 375 VFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYG 434
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
++G AI Y M KG P+ + ++ L R+ A + + G+ P
Sbjct: 435 KSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFY-ELKDMGVSPDT 493
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y +IK + K +EA+ ++MV G P + ++ ID K G A L +
Sbjct: 494 ITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQ 553
Query: 484 MFENQVRQEDG 494
+ E ++ +G
Sbjct: 554 LKEMKIEPTNG 564
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 118/244 (48%), Gaps = 1/244 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+F++LM G + EK + +A G + + L+ C+ ++ EA +L+ +
Sbjct: 705 SFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKF 764
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ V +YN++I G + + AE+ F EM G T+ +++ ++ +
Sbjct: 765 KGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRI 824
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ + V +M RKG+E T +I L +R+ +A+D L ++ G PT +Y
Sbjct: 825 EEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAID-LYYNLMSEGFSPTPCTYGP 883
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
L+ GL + GKM +A + EM+ G +P+ IY+ ++G+ GN E + ++M E
Sbjct: 884 LLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQG 943
Query: 489 VRQE 492
+ +
Sbjct: 944 INPD 947
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 129/316 (40%), Gaps = 28/316 (8%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
+++E +D+ LMS G S T L+ + + ++ ++ E+
Sbjct: 857 KRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYG-------- 908
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+PN +N L+ G G E V ++ +M G PD SY+VL+ C
Sbjct: 909 --------CKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCT 960
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE---FFREMGLSGVESS 351
R+ + + ++ + +E D++ YN +I G +G+ R EE F EM G+ +
Sbjct: 961 AGRLNDGLSYFRQLLELGLEPDLIIYNLLIDG---LGKSERIEEAVCLFNEMKKKGIVPN 1017
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
T+ L+ +AG A +Y ++ KG++P T LI A
Sbjct: 1018 LYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYD 1077
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
V L LI GL +E + A + AEM +G P Y+ +D K
Sbjct: 1078 CVAVGVSLKTA------LISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKS 1131
Query: 472 GNVEMATMLRKEMFEN 487
+E +++E+ E+
Sbjct: 1132 MRIEEMLKVQEEIAED 1147
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 148/351 (42%), Gaps = 36/351 (10%)
Query: 132 LRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLI----KCCLEVKNIEKIETCVDIVR 185
L++ D L+LF + CG +P + L I K +K I++ E
Sbjct: 399 LKADMFDRALELFNHM----NACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEH------ 448
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
+ S+G+ V+ NA++ ++R + ++ E+ KD+ V P
Sbjct: 449 -MKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYEL------------KDMG----VSP 491
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+ T+ ++ + ++ + + +M GC PD + + L+ + + EA KL+
Sbjct: 492 DTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLF 551
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++++ +E YNT++ G G++ EM S + +T+ +++ +
Sbjct: 552 HQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKN 611
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G+V+ AI + M KG P+ S+ ++ L + R EA + +K L P +
Sbjct: 612 GEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQ--MKKILAPDYAT 669
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKG-FEPSLEIYSAFIDGYMKEGNVE 475
++ + G M+EAL E + K + + ++G + + VE
Sbjct: 670 LCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVE 720
>gi|145358679|ref|NP_198856.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171831|sp|Q9FND8.1|PP409_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g40400
gi|10178151|dbj|BAB11596.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|110742507|dbj|BAE99171.1| hypothetical protein [Arabidopsis thaliana]
gi|332007160|gb|AED94543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 610
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 120/517 (23%), Positives = 224/517 (43%), Gaps = 68/517 (13%)
Query: 18 PKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS---GLTP--- 71
PKP L ++ P S ++ + S L H S ++ LL R L P
Sbjct: 26 PKPILNPLYNL---LPQSQNPSKIVDVICSTLNH----SDYSVLLPNLRDEVKSLIPHLG 78
Query: 72 -TQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRV 130
+ S++ L +++ A+ FF + + + ++ +Y ++HIL ++ A +
Sbjct: 79 YPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCE 138
Query: 131 ALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSR 190
+ ++ +F VLV EC P VFD+L+K L++ +E+ + R ++
Sbjct: 139 LIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEE---GFRVFREVLDS 195
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTF 250
G SV V TCN L+ + + + +++Y V V + PN +TF
Sbjct: 196 GFSVSVVTCNHLLNGLLKLDLMEDCWQVY----------------SVMCRVGIHPNTYTF 239
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC----------------- 293
N L F + F +V+D +M G EPD +Y+ L++ +C
Sbjct: 240 NILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYR 299
Query: 294 ------------------EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
++ R+REA + + M D+ ++ D ++YNT+I +C+ G M +
Sbjct: 300 RRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQ 359
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
+++ EM + V T + +V G+ R G + SA+ ++ R + + LI
Sbjct: 360 SKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIV 419
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
LC + + F A +L + + G ++Y LI+ L +EEAL ++ ++ +
Sbjct: 420 SLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQV 479
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ Y A I + G A L EMF+++V+ +
Sbjct: 480 LDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPD 516
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 88/231 (38%), Gaps = 44/231 (19%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR----- 297
V P+ T ++ GF REG + VE+ RL + L+ C+E +
Sbjct: 372 VVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAK 431
Query: 298 -------------------------------MREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ EA L +++++N D Y +IG
Sbjct: 432 HLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGC 491
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA--ILVYNDMCRKGFE 384
C IG AE EM S V+ S LV GYC+ D D A +L M + F+
Sbjct: 492 LCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFD 551
Query: 385 PE--GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
PE S ++ + C ++ E L+ R+ + G P + +LI+ L
Sbjct: 552 PESYNSLVKAVCETGCGYKKALE----LQERMQRLGFVPNRLTCKYLIQVL 598
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 126/241 (52%), Gaps = 1/241 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++N+++ GF +EG + + EM G P+ +Y+ LM C+ RM +A ++ +EM
Sbjct: 585 SYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEM 644
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
++K V+ D+ AY +I GFC+ M A F E+ G+ S + L++G+ G++
Sbjct: 645 KNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNM 704
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+A+ +Y M + G + T LI L + + A D L + GL P E Y
Sbjct: 705 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASD-LYTEMQAVGLVPDEIMYTV 763
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
++ GL ++G+ + +K+ EM P++ IY+A I G+ +EGN++ A L EM +
Sbjct: 764 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 823
Query: 489 V 489
+
Sbjct: 824 I 824
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 153/309 (49%), Gaps = 34/309 (11%)
Query: 195 KVSTCNALI-WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNAL 253
V CN ++ W +GK + E+ R++ + GIG PNV ++N +
Sbjct: 441 NVFICNTILSWLCKQGK-IDKATELLRKM------ESRGIG----------PNVVSYNNV 483
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
M+ R+ + V+ M G +P+ Y+YS+L+ + + ++ +M N+
Sbjct: 484 MLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNI 543
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES-----SSVTFEHLVNGYCRAGDV 368
E + V Y TII G C++G+ ++A E M +E S +++ +++G+ + G++
Sbjct: 544 EVNGVVYQTIINGLCKVGQTSKARELLANM----IEEKRFCVSCMSYNSIIDGFIKEGEM 599
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL---DILKARVVKFGLFPTEKS 425
D A+ Y +MC G P T L+ LC R+ +AL D +K + VK + +
Sbjct: 600 DYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDI----PA 655
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI G C++ ME A + +E++ +G PS +Y++ I G+ GN+ A L K+M
Sbjct: 656 YGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKML 715
Query: 486 ENQVRQEDG 494
++ +R + G
Sbjct: 716 KDGLRCDLG 724
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 152/310 (49%), Gaps = 18/310 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
KI+ +++R + SRG+ V + N ++ R K + ++ R VF + + K
Sbjct: 457 KIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNM----DLARTVF------SNMLEK 506
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+K PN +T++ L+ G ++ + V +V +M E + Y ++ C+
Sbjct: 507 GLK------PNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKV 560
Query: 296 RRMREAEKLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ +A +L M +K ++YN+II GF + GEM A + EM +G+ + +T
Sbjct: 561 GQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVIT 620
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L++G C+ +D A+ + ++M KG + + LI C K+ E+ L + +
Sbjct: 621 YTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFC-KKSNMESASALFSEL 679
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
++ GL P++ Y LI G G M AL + +M+ G L Y+ IDG +KEGN+
Sbjct: 680 LEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNL 739
Query: 475 EMATMLRKEM 484
+A+ L EM
Sbjct: 740 ILASDLYTEM 749
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 133/282 (47%), Gaps = 38/282 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TF+ L+ F + G EK + + +M LG P + ++ + + ++ EA KL
Sbjct: 371 PNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKL 430
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++E + + +V NTI+ C+ G++ +A E R+M G+ + V++ +++ +CR
Sbjct: 431 FDESFETGLA-NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCR 489
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC----DKRRVFEALDIL---------- 410
++D A V+++M KG +P T +LI + C D++ V E ++ +
Sbjct: 490 KKNMDLARTVFSNMLEKGLKPNNYTYSILI-DGCFKNHDEQNVLEVVNQMTSSNIEVNGV 548
Query: 411 ----------------KARVVKFGLFPTEK------SYMFLIKGLCEEGKMEEALKVQAE 448
KAR + + ++ SY +I G +EG+M+ A+ E
Sbjct: 549 VYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEE 608
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
M G P++ Y++ +DG K ++ A +R EM V+
Sbjct: 609 MCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVK 650
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 170/414 (41%), Gaps = 28/414 (6%)
Query: 77 IALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHIL-SRARLIGPARDVIRVALRSP 135
+ L +NNP ALRF+++ + + +IHIL + G A D++ + +
Sbjct: 77 VLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVTSPETYGRASDLLIRYVSTS 136
Query: 136 ENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNI----EKIETCVDIVRMLMSRG 191
P + VLV + F F++ + + N + + VDIV ++ G
Sbjct: 137 NPTP---MASVLVSNLVDSAKL-FGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELG 192
Query: 192 LSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFN 251
+ V N + + + + E+Y + + D G T
Sbjct: 193 VIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNG----------------TTQ 236
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
LM RE + +V+ G EPD YS+ + C+ + A L EM++K
Sbjct: 237 LLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEK 296
Query: 312 NV-EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
+ Y ++I + G M A + EM G+ + V L+ G+C+ D+ S
Sbjct: 297 KLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGS 356
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A+ ++ M +G P T VLI + +AL+ K ++ GL P+ +I
Sbjct: 357 ALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYK-KMESLGLTPSVFHVHTII 415
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+G + K EEALK+ E G ++ I + + K+G ++ AT L ++M
Sbjct: 416 QGWLKGQKHEEALKLFDESFETGL-ANVFICNTILSWLCKQGKIDKATELLRKM 468
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 107/226 (47%), Gaps = 2/226 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+ ++++ ++G E EM G + + + L+ C+ + A L
Sbjct: 301 PSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDL 360
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M ++ + V ++ +I F + GEM +A EF+++M G+ S ++ G+ +
Sbjct: 361 FYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLK 420
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ A+ ++++ G ++ LC + ++ +A ++L+ ++ G+ P
Sbjct: 421 GQKHEEALKLFDESFETGL-ANVFICNTILSWLCKQGKIDKATELLR-KMESRGIGPNVV 478
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
SY ++ C + M+ A V + M+ KG +P+ YS IDG K
Sbjct: 479 SYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFK 524
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
L G E +S F +L+N Y + D A+ + N M G P + + L + +
Sbjct: 155 LFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSIT 214
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
EA + L +R+V G+ + L++ E K EAL+V + + +G EP +YS
Sbjct: 215 EAKE-LYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLA 273
Query: 465 IDGYMKEGNVEMATMLRKEMFENQV 489
+ K N+ MA L +EM E ++
Sbjct: 274 VQACCKTLNLAMANSLLREMKEKKL 298
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 101/219 (46%), Gaps = 2/219 (0%)
Query: 271 VEMARL-GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
V+ A+L G E + +++ L+ + ++R+ A + +M + V V N + +
Sbjct: 150 VDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQ 209
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
+ A+E + M GV+ + T + L+ R A+ V++ +G EP+
Sbjct: 210 RNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLL 269
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
+ + C + A +L+ K P++++Y +I ++G ME+A++ + EM
Sbjct: 270 YSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEM 329
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
V G ++ ++ I G+ K ++ A L +M EN+
Sbjct: 330 VSDGISMNVVAATSLITGHCKNNDLGSALDLFYKM-ENE 367
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 109/267 (40%), Gaps = 42/267 (15%)
Query: 64 LCRSGLTPTQFSQIAL--GLKNNPHL--ALRFFSFTQHKSLCKHSLSSYATIIHILSRAR 119
+C +G++P + +L GL N + AL ++K + K + +Y +IH +
Sbjct: 609 MCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGV-KLDIPAYGALIHGFCKKS 667
Query: 120 LIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIET 179
+ A + L N P ++ L+ +R G+ +
Sbjct: 668 NMESASALFSELLEEGLN-PSQPVYNSLISGFRNLGN--------------------MVA 706
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
+D+ + ++ GL + T LI + + +I ++Y E+ +
Sbjct: 707 ALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEM----------------Q 750
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V + P+ + ++ G ++G F KV ++ EM + P+ Y+ ++A E +
Sbjct: 751 AVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLD 810
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGG 326
EA +L +EM DK + D ++ ++ G
Sbjct: 811 EAFRLHDEMLDKGILPDGATFDILVSG 837
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 189/400 (47%), Gaps = 26/400 (6%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
SL ++A ++HIL RAR AR ++ L + P LF LV+ Y+E + FDL
Sbjct: 121 SLLAHAQLLHILVRARRSADARAILASLLSA--RPPAPPLFPHLVEVYKEFSFSAASFDL 178
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG---KGVISGYEIYR 220
L++ + N +++ + + + + G + + +CN+++ +++ ++ +E +
Sbjct: 179 LLRA---LANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQ 235
Query: 221 EVFGLDSDATAGIGK----DVKRVVR------------VRPNVHTFNALMVGFYREGAFE 264
L T I VK VV V N+ ++A+M G+ G
Sbjct: 236 RAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTN 295
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR-DKNVEHDVVAYNTI 323
+ + G P+ +Y++L+ +C E+ M EAE + +E+R +K + D + +
Sbjct: 296 DARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAV 355
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I G+C++G M A EM S ++ + + ++NGYC+ G + A + ++M G
Sbjct: 356 INGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGV 415
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
P+ + L+ C K + +A + +++ G T +Y L+KG C G +++AL
Sbjct: 416 RPDTYSYNSLVDGYCKKGLMNKAFETYNT-MLRNGFAATTLTYNALLKGFCSLGSIDDAL 474
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++ M+ KG P+ S +DG+ K G E A L KE
Sbjct: 475 RLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKE 514
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 116/236 (49%), Gaps = 1/236 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+NAL+ GF G+ + +W M + G P+ S S L+ F + + +A LW+E
Sbjct: 456 TYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKET 515
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + + +NT+I G C+I M AEE +M +T+ L +GYC+ GD+
Sbjct: 516 LARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDM 575
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D A + N++ GF P LI ++ + DIL + GL P +Y
Sbjct: 576 DRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDIL-FEMSNRGLSPNTVAYGA 634
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LI G C+EG + A + EM+ KG P+L I S+ + + ++G + A ++ + +
Sbjct: 635 LIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNL 690
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 158/353 (44%), Gaps = 48/353 (13%)
Query: 155 GSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
G AP + F+ LI K K+ DI+ + +RGLS ALI + +
Sbjct: 589 GFAPTIEFFNSLITGHFIAKQHGKVN---DILFEMSNRGLSPNTVAYGALIAGWCKEGDL 645
Query: 213 ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
+ Y +Y E+ K +V PN+ ++L+ FYR+G F++ V
Sbjct: 646 HTAYNLYLEMIE-------------KGLV---PNLFICSSLVSCFYRKGKFDEANLVLQN 689
Query: 273 MARLGCEPDCYS--------------------------YSVLMAVFCEERRMREAEKLWE 306
+ PD + +++++ C+ R+ +A+ L
Sbjct: 690 LVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLA 749
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+++DK D Y+++I G G + A + M G+ + VT+ L+ G C++G
Sbjct: 750 DLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSG 809
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++ A+ ++ + KG P T LI + C + EA LK R+++ G+ PT +Y
Sbjct: 810 ELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFK-LKQRMIEEGIHPTVFTY 868
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
LI GLC +G MEEA+K+ +M+ +P+ Y I GY++ +V++ M
Sbjct: 869 SILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIM 921
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 129/253 (50%), Gaps = 1/253 (0%)
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
G+ +++++ ++ + F A++ G+ + G E + EM + + + Y++++
Sbjct: 334 GVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMING 393
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
+C+ RM EA + EM V D +YN+++ G+C+ G M +A E + M +G ++
Sbjct: 394 YCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAAT 453
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
++T+ L+ G+C G +D A+ ++ M +KG P + L+ + +AL++ K
Sbjct: 454 TLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWK 513
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ + GL ++ +I GLC+ +M EA ++ +M P + Y GY K
Sbjct: 514 ETLAR-GLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKI 572
Query: 472 GNVEMATMLRKEM 484
G+++ A+ + E+
Sbjct: 573 GDMDRASRILNEL 585
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 123/273 (45%), Gaps = 27/273 (9%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN + AL+ G+ +EG ++++EM G P+ + S L++ F + + EA
Sbjct: 625 LSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEAN 684
Query: 303 KLWEEMRDKNVEHDVVA--------------------------YNTIIGGFCEIGEMARA 336
+ + + ++ D+ A +N +I G C++G + A
Sbjct: 685 LVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDA 744
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ ++ G + + T+ L++G +G VD A + + M G P T LI
Sbjct: 745 KNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYG 804
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC + A+ + K K G+ P +Y LI C++G + EA K++ M+ +G P
Sbjct: 805 LCKSGELSRAVSLFKKLWTK-GISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHP 863
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ YS I+G +G +E A L +M EN V
Sbjct: 864 TVFTYSILINGLCTQGYMEEAIKLLDQMIENNV 896
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 158/367 (43%), Gaps = 67/367 (18%)
Query: 182 DIVRMLMS---RGLSVKVST--------CN--------ALIWEVSRGKGVISGYEIYREV 222
D RML S RG S + T CN ++ E+ + K ++ + V
Sbjct: 296 DARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLV----VDEAV 351
Query: 223 FGLDSDATAGIGK--DVKRVV------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
FG + +G+ D R++ R++ N+ +N ++ G+ + G + ++ EM
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT 411
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
+G PD YSY+ L+ +C++ M +A + + M + YN ++ GFC +G +
Sbjct: 412 GVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSID 471
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
A + M G+ + ++ L++G+ ++G + A+ ++ + +G +T +I
Sbjct: 472 DALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVI 531
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
LC R+ EA +++ ++ ++ P +Y L G C+ G M+ A ++ E+ GF
Sbjct: 532 NGLCKIERMPEAEELVD-KMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGF 590
Query: 455 EPSLEI-----------------------------------YSAFIDGYMKEGNVEMATM 479
P++E Y A I G+ KEG++ A
Sbjct: 591 APTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYN 650
Query: 480 LRKEMFE 486
L EM E
Sbjct: 651 LYLEMIE 657
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 130/304 (42%), Gaps = 62/304 (20%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN + + L+ GF++ G EK ++W E G + +++ ++ C+ RM EAE
Sbjct: 485 IAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAE 544
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE---------------EFFR------ 341
+L ++M+ D++ Y T+ G+C+IG+M RA EFF
Sbjct: 545 ELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGH 604
Query: 342 --------------EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
EM G+ ++V + L+ G+C+ GD+ +A +Y +M KG P
Sbjct: 605 FIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNL 664
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS---------------------- 425
L+ K + F+ +++ +V + P +
Sbjct: 665 FICSSLVSCFYRKGK-FDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHS 723
Query: 426 ----YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ +I GLC+ G++E+A + A++ KGF YS+ I G G V++A LR
Sbjct: 724 AKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLR 783
Query: 482 KEMF 485
M
Sbjct: 784 DTML 787
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 113/244 (46%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+F+ L+ G + V+ EM LGC S + ++ + + ++E+M
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ D + +C++ + A EF EM GVE + V + ++NGYC G
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A + + + +GF P T +L+ C+++ + EA +++ L E +
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGA 354
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+I G C+ G+ME+A ++ EMV + +L +Y+ I+GY K G + A + EM
Sbjct: 355 VINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVG 414
Query: 489 VRQE 492
VR +
Sbjct: 415 VRPD 418
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 146/324 (45%), Gaps = 60/324 (18%)
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
C LI E + + VI YR S GI D K T+ LM G +
Sbjct: 560 CTGLINEYCKKEKVIEACSAYR------SMVDQGILGDAK----------TYTVLMNGLF 603
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ + E+++ EM G PD +SY VL+ F + M++A +++EM ++ + +V+
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
YN ++GGFC GE+ +A+E EM + G+ ++VT+ +++GYC++GD+ A ++++M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR-----------------VVKFGLF- 420
KG P+ L+ C V A+ I V KFG
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 421 -------------------PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
P + +Y +I LC+EG +E A ++ +M P++ Y
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 462 SAFIDGYMKEGNVEMATMLRKEMF 485
++ ++GY K G R EMF
Sbjct: 844 TSLLNGYDKMGR-------RAEMF 860
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 158/330 (47%), Gaps = 22/330 (6%)
Query: 158 PFVFDLLIKCCLEVKNIEKI-ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGY 216
P+++D CC+ V + E + E + +++ GL + +LI R K V GY
Sbjct: 347 PYMYD----CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGY 402
Query: 217 EIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
E+ E+ KR + + P +T+ ++ G G + ++ EM
Sbjct: 403 ELLVEM--------------KKRNIVISP--YTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
GC P+ Y+ L+ F + R +A ++ +EM+++ + D+ YN++I G + M A
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
F EM +G++ ++ T+ ++GY A + SA +M G P LI E
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
C K +V EA ++ V + G+ K+Y L+ GL + K+++A ++ EM GKG P
Sbjct: 567 YCKKEKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ Y I+G+ K GN++ A+ + EM E
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 162/379 (42%), Gaps = 62/379 (16%)
Query: 148 VKTYRECGSAP---FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
VK RECG P L+ + C K + IE C R ++ +G+ T L+
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYC---KKEKVIEAC-SAYRSMVDQGILGDAKTYTVLMN 600
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ + V EI+RE+ G GI P+V ++ L+ GF + G +
Sbjct: 601 GLFKNDKVDDAEEIFREMRG------KGIA----------PDVFSYGVLINGFSKLGNMQ 644
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
K ++ EM G P+ Y++L+ FC + +A++L +EM K + + V Y TII
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY--------- 375
G+C+ G++A A F EM L G+ S + LV+G CR DV+ AI ++
Sbjct: 705 DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS 764
Query: 376 -------------------------NDMCRKGFE----PEGSTIEVLIGELCDKRRVFEA 406
N + F+ P T ++I LC K EA
Sbjct: 765 STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC-KEGNLEA 823
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L ++ L PT +Y L+ G + G+ E V E + G EP +YS I+
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883
Query: 467 GYMKEGNVEMATMLRKEMF 485
++KEG A +L +MF
Sbjct: 884 AFLKEGMTTKALVLVDQMF 902
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 116/238 (48%), Gaps = 1/238 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN T+ A + G+ F + EM G P+ + L+ +C++ ++ EA
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEAC 577
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ M D+ + D Y ++ G + ++ AEE FREM G+ ++ L+NG+
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G++ A ++++M +G P +L+G C + +A ++L VK GL P
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK-GLHPN 696
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y +I G C+ G + EA ++ EM KG P +Y+ +DG + +VE A +
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 1/239 (0%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
HT++ L+ G + + + + EM G Y Y + V +E M +A+ L++
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M + AY ++I G+C + + E EM + S T+ +V G C +GD
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+D A + +M G P LI R +A+ +LK + + G+ P Y
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK-EMKEQGIAPDIFCYN 491
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI GL + +M+EA EMV G +P+ Y AFI GY++ A KEM E
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 75/148 (50%), Gaps = 6/148 (4%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMA-----RLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
FNAL+ ++ G E +V + R G +P+ +Y++++ C+E + A++L
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKEL 827
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M++ N+ V+ Y +++ G+ ++G A F E +G+E + + ++N + +
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEV 392
G A+++ + M K +G + +
Sbjct: 888 EGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 32/233 (13%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI-WEVSRGKGVISGYE 217
FV+ L+ C + ++E+ T + +G + + NALI W GK +
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGTNK----KGCASSTAPFNALINWVFKFGKTELKTEV 788
Query: 218 IYR------EVFGLDSDATAGIGKDV----------------KRVVRVRPNVHTFNALMV 255
+ R + FG +D T I D + + P V T+ +L+
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G+ + G ++ V+ E G EPD YSV++ F +E +A L ++M KN
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
Query: 316 D-----VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
D + ++ GF ++GEM AE+ M S T L+N C
Sbjct: 909 DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 159/308 (51%), Gaps = 21/308 (6%)
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
+D+++ + + + + N +I+ + + K V +++Y E+ + GI
Sbjct: 61 ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEM------VSKGI------ 108
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
PNV T++AL+ GF+ G + D++ ++ +PD Y++++L+ FC++R+M+
Sbjct: 109 ----SPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMK 164
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
E + ++ M + + DVV YN+++ G+ + E+ A+ F M GV ++ L+
Sbjct: 165 EGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILI 224
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
NG+C+ VD A+ ++N+M K P T LI L R+ AL ++ ++ G+
Sbjct: 225 NGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVD-QMHDRGV 283
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y +I L + ++++A+ + + +G +PS+ Y+ IDG K G ++ A
Sbjct: 284 PPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDA-- 341
Query: 480 LRKEMFEN 487
+ +FE+
Sbjct: 342 --RNIFED 347
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 34/280 (12%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
PN T N L+ G +G + ++ LG D SY L+ C+ R A
Sbjct: 4 HPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALD 63
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L + + K V+ + V YNT+I G C+ + A + + EM G+ + VT+ L++G+
Sbjct: 64 LLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFF 123
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA----------- 412
G + AI ++N + + +P+G T +L+ C R++ E +
Sbjct: 124 VVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVV 183
Query: 413 ---------RVVK--------------FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
R+VK G+ P +SY LI G C+ K+++A+ + EM
Sbjct: 184 TYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEM 243
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
K P++ Y++ IDG K G + A L +M + V
Sbjct: 244 HCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGV 283
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 105/217 (48%), Gaps = 1/217 (0%)
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
+G P+ + + L+ C + ++ +A +++ D V+Y T+I G C++GE
Sbjct: 1 MGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 60
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A + + + V+ ++V + ++ G C+ V+ A +Y++M KG P T LI
Sbjct: 61 ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
++ +A+D+ +++ + P ++ L+ G C++ KM+E V A M+ +G
Sbjct: 121 GFFVVGKLKDAIDLFN-KIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGII 179
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
P + Y++ +DGY V A + M + V +
Sbjct: 180 PDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPD 216
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 173/364 (47%), Gaps = 27/364 (7%)
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
L +FE L +ECG AP V L K + KI +++ +M+ S G+ + T +
Sbjct: 466 LTVFERL----KECGFAPSVVSYGCLINLYAK-VGKISKALEVSKMMESAGIKHNMKTYS 520
Query: 201 ALIWEVSRGKGVISGYEIYREVF--GLDSD---------ATAGIGKDVKRVV-------- 241
LI + K + + I+ +V GL D A G+G + R +
Sbjct: 521 MLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGT-MDRAICMVKEMQK 579
Query: 242 -RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
R RP TF ++ GF R G ++ DV+ M R GC P ++++ L+ E+R+M +
Sbjct: 580 ERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEK 639
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A ++ +EM V + Y TI+ G+ +G+ +A E+F ++ G++ T+E L+
Sbjct: 640 AIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLK 699
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
C++G + SA+ V +M + +LI + V+EA D+++ ++ + G+
Sbjct: 700 ACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQ-QMKQGGVK 758
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y I C+ G M A K+ EM G +P+++ Y+ I G+ + E A
Sbjct: 759 PDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRC 818
Query: 481 RKEM 484
+EM
Sbjct: 819 FQEM 822
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 189/428 (44%), Gaps = 54/428 (12%)
Query: 108 YATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKC 167
Y ++IH + R + A R ++ + L + ++V + + G+A D +
Sbjct: 344 YTSLIHAYAVGRDMEEALSCAR-KMKEEGVEMSLVTYSIIVGGFAKIGNA----DAADRW 398
Query: 168 CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDS 227
E K+ + M+ + + + AL+ E+ G+G+ + +IY +
Sbjct: 399 FKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREME-GEGIDAPIDIYHTMM---- 453
Query: 228 DATAGIGKDVKRVV---RVR-----PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
D +G + K + R++ P+V ++ L+ + + G K +V M G +
Sbjct: 454 DGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIK 513
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
+ +YS+L+ F + + A ++E++ ++ DVV YN II FC +G M RA
Sbjct: 514 HNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICM 573
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+EM +S TF +++G+ RAG++ A+ V++ M R G P T LI L +
Sbjct: 574 VKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVE 633
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMF------------------------------- 428
KR++ +A++IL + G+ P E +Y
Sbjct: 634 KRQMEKAIEILDEMALA-GVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVY 692
Query: 429 ----LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
L+K C+ G+M+ AL V EM + + +Y+ IDG+ + G+V A L ++M
Sbjct: 693 TYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQM 752
Query: 485 FENQVRQE 492
+ V+ +
Sbjct: 753 KQGGVKPD 760
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 107/220 (48%), Gaps = 2/220 (0%)
Query: 252 ALMVGFY-REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
LMV +Y R G + + M G EP + Y+ L+ + R M EA +M++
Sbjct: 310 GLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMKE 369
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
+ VE +V Y+ I+GGF +IG A+ +F+E +++ + +++ YC+ ++D
Sbjct: 370 EGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQ 429
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A + +M +G + ++ + L + + R+ + G P+ SY LI
Sbjct: 430 AEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFE-RLKECGFAPSVVSYGCLI 488
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ GK+ +AL+V M G + +++ YS I+G++K
Sbjct: 489 NLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLK 528
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 51/266 (19%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ +D+ M+ G V T NALI G++ ++ + + LD A AG
Sbjct: 601 EMKRALDVFDMMRRSGCIPTVHTFNALIL------GLVEKRQMEKAIEILDEMALAG--- 651
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
V PN HT+ +M G+ G K + + ++ G + D Y+Y L+ C+
Sbjct: 652 -------VSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKS 704
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF---------------------------- 327
RM+ A + +EM +N+ + YN +I G+
Sbjct: 705 GRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTY 764
Query: 328 -------CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
C+ G+M RA + EM SGV+ + T+ L++G+ RA + A+ + +M
Sbjct: 765 TSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKL 824
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEA 406
G +P+ + L+ L + V EA
Sbjct: 825 AGLKPDKAVYHCLMTALLSRATVTEA 850
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 37/212 (17%)
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
E +DV R+ +P Y ++++ + M A + +E MR + +E Y ++
Sbjct: 289 ENWQDVVSAFERIK-KPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSL 347
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I + +M A R+M GVE S VT+ +V G+ + G+ D+A D K
Sbjct: 348 IHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAA-----DRWFKEA 402
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
+ S + +I Y +I C+ M++A
Sbjct: 403 KDRHSHMNAII-------------------------------YGNMIYAYCQTCNMDQAE 431
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ EM G+G + ++IY +DGY GN E
Sbjct: 432 ALVREMEGEGIDAPIDIYHTMMDGYTMVGNEE 463
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 10/255 (3%)
Query: 232 GIGKDVKRVVRVRPNVHTF---------NALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+ KDV R+ V + F NAL+ F + G E++ VW +M G EP
Sbjct: 145 ALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTL 204
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
Y+Y+ LM + AE+++E M ++ D+V YNT+I G+C+ G+ +A E R+
Sbjct: 205 YTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRD 264
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G E+ +T+ ++ D S + +Y +M KG + ++IG LC + +
Sbjct: 265 METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGK 324
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ E + + +++ G P Y LI G + G +E+A+++ M+ +GF+P + YS
Sbjct: 325 LNEGYTVFE-NMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 383
Query: 463 AFIDGYMKEGNVEMA 477
++G K G VE A
Sbjct: 384 VVVNGLCKNGRVEEA 398
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 220/480 (45%), Gaps = 50/480 (10%)
Query: 18 PKPQLLSQFSTSSSTPPSDQS---HNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQF 74
P P+ + F+ S S+++ ++ +++LL S S ++L CR L
Sbjct: 41 PPPEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLDG--SASMESNLDGFCRKFLIKLSP 98
Query: 75 SQIALGLKNN-----PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR 129
+ ++ LK++ P +A FF +++ + H+L Y +++ +L+ A+DV R
Sbjct: 99 NFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLAL------AKDVDR 152
Query: 130 VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMS 189
+ S E +K FE + SA + LIK ++ +E++ + + R +
Sbjct: 153 IRFVSSE----IKKFEFPMTV-----SAA---NALIKSFGKLGMVEEL---LWVWRKMKE 197
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
G+ + T N L+ + V S ++ +V R++P++ T
Sbjct: 198 NGIEPTLYTYNFLMNGLVSAMFVDSAERVF----------------EVMESGRIKPDIVT 241
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N ++ G+ + G +K + +M G E D +Y ++ + L++EM
Sbjct: 242 YNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMD 301
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+K ++ A++ +IGG C+ G++ F M G + + + L++GY ++G V+
Sbjct: 302 EKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVE 361
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF-GLFPTEKSYMF 428
AI + + M +GF+P+ T V++ LC RV EALD +F GL Y
Sbjct: 362 DAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF--HTCRFDGLAINSMFYSS 419
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI GL + G+++EA ++ EM KG Y+A ID + K V+ A L K M E +
Sbjct: 420 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 479
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARL----GCEPDCYSYSVLMAVFCEERRMREA 301
+ + +NAL+ F + KV++ R+ GC+ Y+Y++L++ +E R EA
Sbjct: 448 DSYCYNALIDAFTKH---RKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEA 504
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KLW+ M DK + + + G C G++ARA + E+ GV + E ++N
Sbjct: 505 LKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINT 563
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
C+AG + A + + + +G E G V+I L R+V +A +K K G+
Sbjct: 564 LCKAGRIKEACKLADGITERGREVPGRIRTVMINAL---RKVGKADLAMKLMHSKIGI 618
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 98/211 (46%), Gaps = 3/211 (1%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +++L+ G + G ++ E ++ EM+ GC D Y Y+ L+ F + R++ EA L+
Sbjct: 413 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 472
Query: 306 EEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M ++ + V Y ++ G + A + + M G+ ++ F L G C
Sbjct: 473 KRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCL 532
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G V A + +++ G + + E +I LC R+ EA + + + G +
Sbjct: 533 SGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADG-ITERGREVPGR 590
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
+I L + GK + A+K+ +G G+E
Sbjct: 591 IRTVMINALRKVGKADLAMKLMHSKIGIGYE 621
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 36/174 (20%)
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
V A N +I F ++G + +R+M +G+E + T+ L+NG A VDSA
Sbjct: 169 VSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSA----- 223
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
RVFE ++ + + P +Y +IKG C+
Sbjct: 224 ------------------------ERVFEVMESGRIK-------PDIVTYNTMIKGYCKA 252
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
G+ ++A++ +M +G E Y I + + L +EM E ++
Sbjct: 253 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQ 306
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 10/255 (3%)
Query: 232 GIGKDVKRVVRVRPNVHTF---------NALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+ KDV R+ V + F NAL+ F + G E++ VW +M G EP
Sbjct: 163 ALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTL 222
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
Y+Y+ LM + AE+++E M ++ D+V YNT+I G+C+ G+ +A E R+
Sbjct: 223 YTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRD 282
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G E+ +T+ ++ D S + +Y +M KG + ++IG LC + +
Sbjct: 283 METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGK 342
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ E + + +++ G P Y LI G + G +E+A+++ M+ +GF+P + YS
Sbjct: 343 LNEGYTVFE-NMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 401
Query: 463 AFIDGYMKEGNVEMA 477
++G K G VE A
Sbjct: 402 VVVNGLCKNGRVEEA 416
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 217/480 (45%), Gaps = 50/480 (10%)
Query: 18 PKPQLLSQFSTSSSTPPSDQS---HNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQF 74
P P+ + F+ S S+++ ++ +++LL S S ++L CR L
Sbjct: 59 PPPEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLDG--SASMESNLDGFCRKFLIKLSP 116
Query: 75 SQIALGLKNN-----PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR 129
+ ++ LK++ P +A FF +++ + H+L Y +++ +L+ A+DV R
Sbjct: 117 NFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLAL------AKDVDR 170
Query: 130 VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMS 189
+ S E +K FE + SA + LIK + +E + + R +
Sbjct: 171 IRFVSSE----IKKFEFPMTV-----SAA---NALIK---SFGKLGMVEELLWVWRKMKE 215
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
G+ + T N L+ + V S ++ +V R++P++ T
Sbjct: 216 NGIEPTLYTYNFLMNGLVSAMFVDSAERVF----------------EVMESGRIKPDIVT 259
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N ++ G+ + G +K + +M G E D +Y ++ + L++EM
Sbjct: 260 YNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMD 319
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+K ++ A++ +IGG C+ G++ F M G + + + L++GY ++G V+
Sbjct: 320 EKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVE 379
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF-GLFPTEKSYMF 428
AI + + M +GF+P+ T V++ LC RV EALD +F GL Y
Sbjct: 380 DAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF--HTCRFDGLAINSMFYSS 437
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI GL + G+++EA ++ EM KG Y+A ID + K V+ A L K M E +
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 497
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARL----GCEPDCYSYSVLMAVFCEERRMREA 301
+ + +NAL+ F + KV++ R+ GC+ Y+Y++L++ +E R EA
Sbjct: 466 DSYCYNALIDAFTKH---RKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEA 522
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KLW+ M DK + + + G C G++ARA + E+ GV + E ++N
Sbjct: 523 LKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINT 581
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
C+AG + A + + + +G E G V+I L R+V +A +K K G+
Sbjct: 582 LCKAGRIKEACKLADGITERGREVPGRIRTVMINAL---RKVGKADLAMKLMHSKIGI 636
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 98/211 (46%), Gaps = 3/211 (1%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +++L+ G + G ++ E ++ EM+ GC D Y Y+ L+ F + R++ EA L+
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 490
Query: 306 EEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M ++ + V Y ++ G + A + + M G+ ++ F L G C
Sbjct: 491 KRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCL 550
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G V A + +++ G + + E +I LC R+ EA + + + G +
Sbjct: 551 SGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADG-ITERGREVPGR 608
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
+I L + GK + A+K+ +G G+E
Sbjct: 609 IRTVMINALRKVGKADLAMKLMHSKIGIGYE 639
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 36/174 (20%)
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
V A N +I F ++G + +R+M +G+E + T+ L+NG A VDSA
Sbjct: 187 VSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSA----- 241
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
RVFE ++ + + P +Y +IKG C+
Sbjct: 242 ------------------------ERVFEVMESGRIK-------PDIVTYNTMIKGYCKA 270
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
G+ ++A++ +M +G E Y I + + L +EM E ++
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQ 324
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 162/350 (46%), Gaps = 50/350 (14%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
I + + +++ + + ++ V N +I + + K V Y++Y E+
Sbjct: 177 IGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMI---------- 226
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
R+ P+V TFN+L++GF G ++ ++ EM PD Y++S+L+ C
Sbjct: 227 ------TKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALC 280
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
++ + A+ + M + V DVV Y++++ G+C + E+ +A+ F M GV +
Sbjct: 281 KDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAH 340
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA------- 406
++ ++NG + VD A+ ++ +MC KG P+ T LI LC R+ A
Sbjct: 341 SYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEM 400
Query: 407 ---------------LDIL-------KA-----RVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+D+L KA ++ G+ P+ +Y LI GLC+ G++
Sbjct: 401 HNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRL 460
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ A V +++ KG+ + Y+ I+G KEG A +L +M N +
Sbjct: 461 KNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGI 510
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 125/242 (51%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+++LM G+ K + V+ M+RLG P +SY++++ + + + EA
Sbjct: 300 VIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEAL 359
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++EM K + D V YN++I G C++G ++ A + EM +G+ + +T+ L++
Sbjct: 360 SLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVL 419
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ +D AI + + +G +P T +LI LC R+ A D+ + ++K G
Sbjct: 420 CKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIK-GYSVN 478
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I GLC+EG EA + ++M G P Y I ++ E A L +
Sbjct: 479 AWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLR 538
Query: 483 EM 484
EM
Sbjct: 539 EM 540
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 34/280 (12%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
P TFN L+ G G ++ + LG D SY L+ C+ R A +
Sbjct: 126 HPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQ 185
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ +++ K V DVV YN II C+ ++ A + + EM + VTF L+ G+C
Sbjct: 186 MLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFC 245
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL------------- 410
G + A ++++M K P+ T +L+ LC + A ++L
Sbjct: 246 VVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVV 305
Query: 411 ----------------KARVV-----KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
KA+ V + G+ P SY +I GL + ++EAL + EM
Sbjct: 306 TYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEM 365
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
KG P Y++ IDG K G + A L EM N +
Sbjct: 366 CCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGI 405
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P + TFN L+ + G ++ ++ +LG P +++ L+ C +++EA
Sbjct: 90 ITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEAL 149
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + D V+Y T+I G C+IGE A + +++ V + V + ++N
Sbjct: 150 HFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSL 209
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ V A +Y++M K P+ T LI C ++ EA + V+K + P
Sbjct: 210 CKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLK-NINPD 268
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
++ L+ LC++G + A + A M+ +G P + YS+ +DGY
Sbjct: 269 VYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGY 314
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 90/174 (51%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+N+L+ G + G + EM G D +Y+ L+ V C+ + +A
Sbjct: 370 IAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAI 429
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L ++++D+ ++ + YN +I G C+ G + A++ F+++ + G ++ T+ ++NG
Sbjct: 430 ALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGL 489
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
C+ G + A ++ + M G P+ T E +I L K +A +L+ +++
Sbjct: 490 CKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIR 543
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 107/239 (44%), Gaps = 7/239 (2%)
Query: 259 REGAFEKVEDV--WVEMARLGCEPDCYSYSVLMA--VFCEERRMREAEKLWEEMRDKNVE 314
+ F+ DV + M R+ P ++ ++ V A L ++ K +
Sbjct: 32 KSNDFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGIT 91
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
+V +N ++ +C +GEM A F ++ G +++TF L+NG C G + A+
Sbjct: 92 PTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHF 151
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE-KSYMFLIKGL 433
++ + GF + + LI LC AL +LK ++ L T+ Y +I L
Sbjct: 152 HDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKK--IEGKLVNTDVVMYNIIINSL 209
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
C++ + +A ++ +EM+ K P + +++ I G+ G ++ A L EM + +
Sbjct: 210 CKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPD 268
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 58/106 (54%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+++T+N L+ G + G + +DV+ ++ G + ++Y++++ C+E EAE
Sbjct: 440 IQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAE 499
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
L +M + + D V Y TII E +AE+ REM + G+
Sbjct: 500 VLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 70/141 (49%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ ++ T+N+L+ + +K + ++ G +P Y+Y++L+ C+ R++ A+
Sbjct: 405 IPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQ 464
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++++ K + YN +I G C+ G AE +M +G+ +VT+E ++
Sbjct: 465 DVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRAL 524
Query: 363 CRAGDVDSAILVYNDMCRKGF 383
R + + A + +M +G
Sbjct: 525 FRKDENEKAEKLLREMIIRGL 545
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 168/390 (43%), Gaps = 39/390 (10%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
K + +Y II L +AR + A V+R + + P + ++ Y G
Sbjct: 297 KPDVVTYNLIIDALCKARAMDKAELVLR-QMTTDGAQPDTVTYSCMIHGYATLG------ 349
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
+++ + R + RGL + TCN+ + + + E +
Sbjct: 350 --------------RLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFF-- 393
Query: 222 VFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
D+ G +P++ ++ L+ G+ EG F + ++ M G +
Sbjct: 394 ------DSMTAKGH--------KPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAAN 439
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
C+ +++L+ + + + +A ++ EM+ + V DVV Y+T+I F +G + A E F
Sbjct: 440 CHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFN 499
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF-EPEGSTIEVLIGELCDK 400
+M G++ ++ + ++ G+C G + A + ++M KG P+ +I LC
Sbjct: 500 QMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKD 559
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
RV +A DI G P ++ LI G C GKM++A K+ M G EP +
Sbjct: 560 GRVMDAHDIFDL-ATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVT 618
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
Y+ +DGY K G + L +EM V+
Sbjct: 619 YNTLLDGYFKNGRINDGLTLFREMQRKGVK 648
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+V T+N ++ + A +K E V +M G +PD +YS ++ + R++EA
Sbjct: 296 VKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAA 355
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++ EM+ + + ++V N+ + C+ G A EFF M G + ++ L++GY
Sbjct: 356 KMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGY 415
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G I ++N M G +LI + V +A+ I + + G+ P
Sbjct: 416 ASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIF-TEMQQQGVSPD 474
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I G++ +A++ +MV +G +P+ +YS+ I G+ G + A L
Sbjct: 475 VVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVS 534
Query: 483 EMFENQVRQED 493
EM + + D
Sbjct: 535 EMINKGIPRPD 545
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 3/250 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG--CEPDCYSYSVLMAVFCEERRMREAE 302
PN +++ ++ ++ D+ MA+ G C PD +YS ++ F E +A
Sbjct: 226 PNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKAC 285
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ EM + V+ DVV YN II C+ M +AE R+M G + +VT+ +++GY
Sbjct: 286 SLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGY 345
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G + A ++ +M ++G P T + LC R EA + + K G P
Sbjct: 346 ATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAK-GHKPD 404
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY L+ G EG + + + M G + +++ I Y K G V+ A ++
Sbjct: 405 IFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFT 464
Query: 483 EMFENQVRQE 492
EM + V +
Sbjct: 465 EMQQQGVSPD 474
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 3/211 (1%)
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN--VEHDVVAYN 321
E V + M+ LGC P+ SYS+++ C+ + A L + M + DVVAY+
Sbjct: 210 EAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYS 269
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
T+I GF GE +A F EM GV+ VT+ +++ C+A +D A LV M
Sbjct: 270 TVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTD 329
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G +P+ T +I R+ EA + + + K GL P + + LC+ G+ +E
Sbjct: 330 GAQPDTVTYSCMIHGYATLGRLKEAAKMFR-EMKKRGLIPNIVTCNSFLASLCKHGRSKE 388
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
A + M KG +P + Y + GY EG
Sbjct: 389 AAEFFDSMTAKGHKPDIFSYCTLLHGYASEG 419
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 114/242 (47%), Gaps = 1/242 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ + RP V TFN+L+ G+ G +K + M +G EPD +Y+ L+ + +
Sbjct: 570 DLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKN 629
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ + L+ EM+ K V+ + V Y ++ G G A + F EM SG + +
Sbjct: 630 GRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIY 689
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
++ G CR D AI+++ + + + + +I + +R EA ++ A +
Sbjct: 690 GIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELF-ATIS 748
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
GL P E +Y +I L ++G +E+A + + M G P + + I +++G +
Sbjct: 749 ASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIA 808
Query: 476 MA 477
A
Sbjct: 809 KA 810
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/446 (21%), Positives = 182/446 (40%), Gaps = 46/446 (10%)
Query: 45 VVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIAL--GLKNNPHLALRFFSFTQHKSL-C 101
+ SL H RSK S+ G P FS L G + A F KS
Sbjct: 377 LASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGI 436
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
+ + +IH ++ ++ A +I ++ P + + ++ T+ G
Sbjct: 437 AANCHVFTILIHAYAKRGMVDDAM-LIFTEMQQQGVSPDVVTYSTVISTFSRMG------ 489
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
++ ++ +++RG+ + +++I G++ E+ E
Sbjct: 490 --------------RLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSE 535
Query: 222 VFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
+ I K + R P++ F++++ ++G D++ +G P
Sbjct: 536 M----------INKGIPR-----PDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPG 580
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
+++ L+ +C +M +A K+ + M VE D+V YNT++ G+ + G + FR
Sbjct: 581 VITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFR 640
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM GV+ ++VT+ ++ G RAG +A +++M G S +++G LC
Sbjct: 641 EMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNN 700
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFL---IKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
EA+ + + K G + S L I + + + EEA ++ A + G P+
Sbjct: 701 CADEAIILFQ----KLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNE 756
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEM 484
Y I +K+G VE A + M
Sbjct: 757 STYGVMIINLLKDGGVEDANNMFSSM 782
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 2/141 (1%)
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ L++ CRA D + ++ + R G + + T L+ LC R EA+++L R
Sbjct: 159 TYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHR 218
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG--FEPSLEIYSAFIDGYMKE 471
+ + G P SY ++K LC+ + AL + M +G P + YS I G+ E
Sbjct: 219 MSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNE 278
Query: 472 GNVEMATMLRKEMFENQVRQE 492
G A L EM V+ +
Sbjct: 279 GETGKACSLFHEMTRQGVKPD 299
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 89/203 (43%), Gaps = 1/203 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+PN T+ ++ G +R G + EM G Y +++ C EA
Sbjct: 647 VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI 706
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++++ NV+ + NT+I ++ A+E F + SG+ + T+ ++
Sbjct: 707 ILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINL 766
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G V+ A +++ M + G P + +I L +K + +A + L ++V +
Sbjct: 767 LKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYL-SKVDGKRILLE 825
Query: 423 EKSYMFLIKGLCEEGKMEEALKV 445
+ ++ +GK +E +K+
Sbjct: 826 ASTTSLMLSLFSRKGKYQEDIKL 848
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 144/284 (50%), Gaps = 38/284 (13%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V RPNV +++ ++ G + G +E+ ++ EM G +P+ ++SVL+ + C+E ++
Sbjct: 230 VFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVI 289
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A+KL E M + ++ Y ++I GFC +G++ A+E F M G E +++ L+
Sbjct: 290 KAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLI 349
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
NGYC+ V+ A+ ++N+M G P+ T VL+ L +V +A ++ RV+K
Sbjct: 350 NGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELF--RVIKPYA 407
Query: 420 FPTE-------------KSYMF-----------------------LIKGLCEEGKMEEAL 443
P + Y+F LI GLC+ GK+E A
Sbjct: 408 MPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAW 467
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++ ++ +G +P YS+ I G+ K+G V+ A +L ++M EN
Sbjct: 468 ELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEEN 511
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 121/282 (42%), Gaps = 42/282 (14%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ +FN L+ G + + +V ++ +M G PD + ++L+ C R+ E
Sbjct: 90 SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL------- 358
+ + DVV + T+I G C + A + F M G + VT+ L
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209
Query: 359 ----------------------------------VNGYCRAGDVDSAILVYNDMCRKGFE 384
++G C+ G+ + AI ++N+M +G +
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P T VLI LC + +V +A +L+ +++ G+ P +Y LIKG C G + A +
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEM-MIQIGIVPNLFTYTSLIKGFCLVGDLNSAKE 328
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ M KG+EP + Y+ I+GY K VE A L EM
Sbjct: 329 LFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLH 370
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 124/254 (48%), Gaps = 1/254 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ + PN+ T+ +L+ GF G ++++V M G EPD SY++L+ +C+ ++ E
Sbjct: 301 IGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEE 360
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A KL+ EM + DV ++ G++ A+E FR + + ++
Sbjct: 361 AMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLD 420
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ G + A+ ++N++ + + T LI LC ++ A ++ + ++ + G+
Sbjct: 421 GLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFE-KLYEEGIQ 479
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y +I G C++G++++A + +M G P L YS + G+ + +E L
Sbjct: 480 PDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQL 539
Query: 481 RKEMFENQVRQEDG 494
M E V +DG
Sbjct: 540 LHRMIEKDVWPDDG 553
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 133/324 (41%), Gaps = 77/324 (23%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TF L+ G E + +++ M +LGC P+ +Y L+ C + A K
Sbjct: 159 PDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKW 218
Query: 305 WEEMRDK------NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE-- 356
+EM + N +V++Y+ II G C++G A F EM GV+ + VTF
Sbjct: 219 HQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVL 278
Query: 357 ---------------------------------HLVNGYCRAGDVDSAILVYNDMCRKGF 383
L+ G+C GD++SA ++ M KG+
Sbjct: 279 IDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGY 338
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK------------ 431
EP+ + +LI C +V EA+ + ++ G++P K+ L+K
Sbjct: 339 EPDVISYNMLINGYCKTLKVEEAMKLFN-EMLHVGMWPDVKTSGVLLKALFLAGKVDDAK 397
Query: 432 -----------------------GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
GLC+ G + EA+K+ E+ + +E + IDG
Sbjct: 398 ELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGL 457
Query: 469 MKEGNVEMATMLRKEMFENQVRQE 492
K G +E A L ++++E ++ +
Sbjct: 458 CKAGKLETAWELFEKLYEEGIQPD 481
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 102/205 (49%), Gaps = 1/205 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V + P+V T L+ + G + ++++ + D + + C+ + E
Sbjct: 371 VGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFE 430
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A KL+ E+ N++ D+ + +I G C+ G++ A E F ++ G++ ++ + +++
Sbjct: 431 AMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIH 490
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G+C+ G VD A +++ M G P+ T +L+ + ++ + + +L R+++ ++
Sbjct: 491 GFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLH-RMIEKDVW 549
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKV 445
P + Y + +C++ K +E L +
Sbjct: 550 PDDGIYAIVEDMVCKDEKYKEWLDL 574
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 328 CEIGEMA--RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
C+ G ++ +A +FF M S +F L+ G + +Y M G P
Sbjct: 70 CKTGSISVTQAHQFFDLM-----MRSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWP 124
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+ T+ +LI LC+ R+ E L + A +++ G P ++ LIKGLC E ++ EA K+
Sbjct: 125 DLLTLNILINCLCNVNRINEGLAAM-AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKL 183
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
M G P++ Y I G GN+ +A +EM +
Sbjct: 184 FMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLND 225
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 82/161 (50%)
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G + G + ++ E+ + D ++ L+ C+ ++ A +L+E++ ++ ++
Sbjct: 421 GLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQP 480
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
D +AY+++I GFC+ G++ +A F++M +G +T+ L+ G+ + ++ + +
Sbjct: 481 DAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLL 540
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
+ M K P+ ++ +C + E LD+L+ V+
Sbjct: 541 HRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQ 581
>gi|357463937|ref|XP_003602250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491298|gb|AES72501.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 946
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 139/552 (25%), Positives = 236/552 (42%), Gaps = 127/552 (23%)
Query: 50 THHRSKSRWNHLLSLCRSGLTPTQF-------------SQIALGL---KNNPHLALRFFS 93
T H +K R++ +L +S + T F SQI L +NNP LAL FS
Sbjct: 26 TIHNTKFRFSSSTALAQSSTSETHFTKPSNSSSFHPNTSQILQKLHLYRNNPSLALSHFS 85
Query: 94 FTQHKSLCKHSLSSYATIIHILS----RARLIGPARDVI-RVALRSP------------- 135
+++ H++ +Y II IL RL RD+I + ++P
Sbjct: 86 ELKNQHGFSHNIQTYVAIIRILCYWNLNRRLDSLFRDIIISHSKQNPLFEIHDLFEKLLE 145
Query: 136 ------ENDPKLKLFEVLVKT------------------YRECGSAP------FVFDLLI 165
+N L+ F VK R G P F+ + L+
Sbjct: 146 GVNVKDKNHYLLRAFVGFVKACVGLNMFDDAIDFMFMFQIRRFGILPNIFACNFLINRLV 205
Query: 166 KC-----CLEV-KNIEKIETCVD------IVRMLMSRGLSVKVSTCNALIWEVSRGKGVI 213
KC E+ I+ + C + I++ L ++G +K ++ +++ + GV
Sbjct: 206 KCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKALGTKGGDLKQASG---VFDEMKEAGVT 262
Query: 214 SG---YEIYREVFGLDSDATAGIGKDVKRVVRVRP---NVHTFNALMVGFYREGAFEKVE 267
Y Y E GL ++ + +G D+ R +R +V+ + A++ GF E +K
Sbjct: 263 PNSYCYAAYIE--GLCNNHQSDLGYDLLRALRENNAPIDVYAYTAVIRGFCNEMKLDKAM 320
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
V+ +M PDC+ YS L+ +C+ + +A L+E+M K ++ + V + I+ F
Sbjct: 321 QVFYDMEWQRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCF 380
Query: 328 CEIGEMARAEEFFREMGLSGV----ESSSVTFEHL------------------------- 358
E+GE +R + F+E+ SGV + ++ F+ L
Sbjct: 381 AEMGEDSRVVDTFKEVKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDI 440
Query: 359 ------VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
+ GYC G D A +++ +M KGF+P+ VL LC R V EA+D+L
Sbjct: 441 KHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNY 500
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ G+ P ++ +I+G C EGK+EEA M + S+EIY+A + GY +
Sbjct: 501 MDSQ-GVKPNSTTHKIIIEGFCSEGKIEEAEGYFNSMK----DESVEIYTAMVSGYCEAD 555
Query: 473 NVEMATMLRKEM 484
+E + L E+
Sbjct: 556 LIEKSYELFHEL 567
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 121/267 (45%), Gaps = 29/267 (10%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+V +N L G + D+ M G +P+ ++ +++ FC E ++ EAE
Sbjct: 472 KPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEAEG 531
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM---GLSGVESS------SVT 354
+ M+D++VE Y ++ G+CE + ++ E F E+ G + ESS V
Sbjct: 532 YFNSMKDESVE----IYTAMVSGYCEADLIEKSYELFHELSNRGDTAQESSCLKQLSKVL 587
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ ++ C+ G++ A +++ +GF P+ T ++I C + EA D+ +
Sbjct: 588 YSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMK 647
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA---------------EMVGKGFEPSLE 459
+ G+ P +Y L+ G ++ + +E Q +M + P +
Sbjct: 648 SR-GIKPDVITYTVLLDGKSKQARSKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSPDVV 706
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFE 486
IY+ IDG++K N E A L E+ +
Sbjct: 707 IYTVLIDGHIKVDNFEDAIRLFNEVMK 733
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 33/268 (12%)
Query: 218 IYREVFGLDS-DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
++ +F L D AG+ +D+K + + ++ + + G+ +G +K ++ EM
Sbjct: 411 VFDSLFKLGKMDEVAGMLEDLKSM-HIDFDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEK 469
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G +PD +Y+VL A C R + EA L M + V+ + + II GFC G++ A
Sbjct: 470 GFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEA 529
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
E +F M VE + +V+GYC A ++ + +++++ +G + S+
Sbjct: 530 EGYFNSMKDESVE----IYTAMVSGYCEADLIEKSYELFHELSNRGDTAQESS------- 578
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
C K+ ++V+ Y ++ LC++G M+ A + +G+GF P
Sbjct: 579 -CLKQL---------SKVL----------YSKVLAELCQKGNMQRARSLFDFFLGRGFTP 618
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ Y+ I Y ++ A L ++M
Sbjct: 619 DVVTYTIMIKSYCTMNCLQEAHDLFQDM 646
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE---- 300
P+V T+ ++ + ++ D++ +M G +PD +Y+VL+ ++ R +E
Sbjct: 618 PDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYTVLLDGKSKQARSKEHFSS 677
Query: 301 -----------AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
+W +M+D+ V DVV Y +I G ++ A F E+ G+E
Sbjct: 678 QHGKGKDAPYDVSTIWRDMKDREVSPDVVIYTVLIDGHIKVDNFEDAIRLFNEVMKRGLE 737
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
+VT+ L +G +G+ + A+ +YN+M KG P
Sbjct: 738 PDNVTYTALFSGLLNSGNSEIAVTLYNEMSSKGMTP 773
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 27/240 (11%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLG---CEPDCYS------YSVLMAVFCEER 296
+V + A++ G+ EK +++ E++ G E C YS ++A C++
Sbjct: 540 SVEIYTAMVSGYCEADLIEKSYELFHELSNRGDTAQESSCLKQLSKVLYSKVLAELCQKG 599
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF- 355
M+ A L++ + DVV Y +I +C + + A + F++M G++ +T+
Sbjct: 600 NMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYT 659
Query: 356 -------------EHLVNGYCRAGDVDSAI-LVYNDMCRKGFEPEGSTIEVLI-GELCDK 400
EH + + + D + ++ DM + P+ VLI G + K
Sbjct: 660 VLLDGKSKQARSKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSPDVVIYTVLIDGHI--K 717
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
FE L V+K GL P +Y L GL G E A+ + EM KG P L I
Sbjct: 718 VDNFEDAIRLFNEVMKRGLEPDNVTYTALFSGLLNSGNSEIAVTLYNEMSSKGMTPPLHI 777
>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 178/419 (42%), Gaps = 54/419 (12%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
KHSL T I + + P D+ + L S + L F ++K +
Sbjct: 8 KHSLKLVETKIRFFTS---LSPPSDLTTIILHSKTPEQALDTFTSVLKQNPNNPTKKLHL 64
Query: 162 DLLIKCCLEVKNIEKIETCV--DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
+ L + C+ D+++ L+ +V N+L++ + G +
Sbjct: 65 YSAVIHYLTGAKVYPTARCLTKDLIQTLLQSCTPRRV---NSLVFN---ALSQLRGSKFN 118
Query: 220 REVFGLDSDATAGIGKDVKRVVRVR------PNVHTFNALMVGFYREGAFEKVEDVWVEM 273
VFG+ A + +G V +RV P V NAL+ G ++ +F+ + +++ M
Sbjct: 119 PSVFGVLIIAFSEVGL-VDEALRVYLKVGAFPAVQACNALLNGLLKKSSFDIMWELYNNM 177
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
P +Y+VL+ C + + A+ L EM K +E VV Y T+I G C ++
Sbjct: 178 VSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKL 237
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
AE FR+M SGV + T+ L++GYC+ +V A+ +Y M G +P T +L
Sbjct: 238 MEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGIL 297
Query: 394 IGELCD------KRRVF-----------------------------EALDILKARVVKFG 418
I LC RR F EA D+L + KF
Sbjct: 298 IDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLL-LEMEKFK 356
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ P +Y LIK C G +EEA + M +G + +Y++ IDGY KEGN+E A
Sbjct: 357 ISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKA 415
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 116/486 (23%), Positives = 208/486 (42%), Gaps = 74/486 (15%)
Query: 71 PTQFSQIALGLKNNPHLALRFFS--FTQHKSLCKHSLSSYATIIHILSRARLIGPAR--- 125
P+ + I L K P AL F+ Q+ + L Y+ +IH L+ A++ AR
Sbjct: 27 PSDLTTIILHSKT-PEQALDTFTSVLKQNPNNPTKKLHLYSAVIHYLTGAKVYPTARCLT 85
Query: 126 -DVIRVALRS--PENDPKL---------------KLFEVLVKTYRECGSAPFVFDLLIKC 167
D+I+ L+S P L +F VL+ + E G + D ++
Sbjct: 86 KDLIQTLLQSCTPRRVNSLVFNALSQLRGSKFNPSVFGVLIIAFSEVG----LVDEALRV 141
Query: 168 CLEVKNIEKIETCVDIVRMLM----------------SRGLSVKVSTCNALI------WE 205
L+V ++ C ++ L+ SR L V T N L+ +
Sbjct: 142 YLKVGAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGD 201
Query: 206 VSRGKGVIS-----GYE----IYRE-VFGLDSDATAGIGKDVKRVVR---VRPNVHTFNA 252
V R K +IS G E IY + GL S++ + + R ++ V PN++T+N
Sbjct: 202 VLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNV 261
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
LM G+ + ++ ++ M G +P+ ++ +L+ C+ R + A + + +M
Sbjct: 262 LMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFG 321
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
V +VV +N++I G+ + G + A + EM + T+ L+ CR G V+ A
Sbjct: 322 VVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEAD 381
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF-------GLFPTEKS 425
+ M ++G LI C + + +AL+I KA KF GL P +
Sbjct: 382 DILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKA--TKFFSDMRRNGLRPDALA 439
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI-DGYMKEGNVEMATMLRKEM 484
Y +++G M + + + A+M+ G P+ E+ S + GY G ++ A +++
Sbjct: 440 YAVMLQGHLNAKHMADVMMLHADMIKMGIVPN-EVTSQVVRRGYQDNGYLKSALWCSRDL 498
Query: 485 FENQVR 490
E+ R
Sbjct: 499 TESCPR 504
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 164/350 (46%), Gaps = 50/350 (14%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
I + T + ++R + + + + V N +I + + K VI YE+Y ++ I
Sbjct: 186 IGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQM----------I 235
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
K ++ P+V TF+AL+ GF G E+ ++ EM PD Y++++L+ C
Sbjct: 236 AK------KISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALC 289
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+E ++ A+ + M + V +VV Y++++ G+C + ++ +A+ + G ++
Sbjct: 290 KEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAH 349
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---- 409
++ ++NG+C+ VD A+ ++NDM KG P+ T LI LC R+ A ++
Sbjct: 350 SYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEM 409
Query: 410 ------------------------------LKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
L ++ G+ P ++ LI GLC+ G++
Sbjct: 410 HDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRL 469
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ A V +++ KG+ + Y+ ++G KEG + A L +M +N +
Sbjct: 470 KNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGI 519
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV T+++LM G+ K + V ++++G P+ +SY ++ FC+ + + EA
Sbjct: 309 VMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEAL 368
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ +M+ K + D V YN++I G C+ G ++ A E EM +G ++ T+ L++
Sbjct: 369 SLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDAL 428
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ VD AI + + +G +P+ T +LI LC R+ A D+ + + K G
Sbjct: 429 CKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSK-GYSVN 487
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y ++ GLC+EG +EA + ++M G P Y I + E A L +
Sbjct: 488 AWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLR 547
Query: 483 EMFENQV 489
EM V
Sbjct: 548 EMIARDV 554
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 119/277 (42%), Gaps = 34/277 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ TFN L+ G G ++ + LG D +SY L+ C+ R A ++
Sbjct: 136 PDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQM 195
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ K V+ +VV YNTII C+ + A E + +M + VTF L+ G+C
Sbjct: 196 LRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCI 255
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL-------------- 410
G ++ A ++ +M K P+ T +L+ LC + + A ++L
Sbjct: 256 VGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVT 315
Query: 411 ---------------KAR-----VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
KA+ + + G P SY +I G C+ ++EAL + +M
Sbjct: 316 YSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQ 375
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
KG P Y++ IDG K G + A L EM +N
Sbjct: 376 FKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDN 412
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ TFN L+ + + ++ ++G EPD +++ L+ C +++EA
Sbjct: 99 ITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEAL 158
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + D +Y T+I G C+IGE A + R++ V+ + V + +++
Sbjct: 159 HFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSL 218
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ V A +Y+ M K P+ T LI C ++ EA + + V+K + P
Sbjct: 219 CKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLK-NINPD 277
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
++ L+ LC+EG ++ A + M+ +G P++ YS+ +DGY
Sbjct: 278 YYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGY 323
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 1/201 (0%)
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G PD +++++L+ +C M A + ++ E D + +NT+I G C G++ A
Sbjct: 98 GITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEA 157
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
F + G ++ L+NG C+ G+ +A+ + + K + +I
Sbjct: 158 LHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDS 217
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC + V +A ++ + K + P ++ LI G C G++EEA + EMV K P
Sbjct: 218 LCKHKLVIDAYELYSQMIAK-KISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINP 276
Query: 457 SLEIYSAFIDGYMKEGNVEMA 477
++ +D KEGN++ A
Sbjct: 277 DYYTFNILVDALCKEGNLKGA 297
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 95/187 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+N+L+ G + G ++ EM G + ++Y+ L+ C+ + +A
Sbjct: 379 IAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAI 438
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L ++++D+ ++ D+ +N +I G C++G + A++ F+++ G ++ T+ +VNG
Sbjct: 439 ALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGL 498
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G D A + + M G P+ T E LI L K +A +L+ + + ++
Sbjct: 499 CKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYAL 558
Query: 423 EKSYMFL 429
E M L
Sbjct: 559 EGLEMVL 565
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 3/178 (1%)
Query: 317 VVAYNTIIGGFCEIGE--MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
++ +N I+G + A R + G+ TF L+N YC +++ A +
Sbjct: 66 IIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSM 125
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
+ + G+EP+ T LI LC +V EAL V+ G + SY LI GLC
Sbjct: 126 MAKILKMGYEPDTITFNTLIKGLCLNGKVKEALH-FHDHVLALGFHLDQFSYGTLINGLC 184
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ G+ AL++ ++ GK + ++ +Y+ ID K V A L +M ++ +
Sbjct: 185 KIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPD 242
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 121/521 (23%), Positives = 224/521 (42%), Gaps = 91/521 (17%)
Query: 34 PSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFS 93
P ++++ A ++ L +++ S + LLS + L+ T Q +K P A FF+
Sbjct: 50 PRSRNNSKTAKTIANLINYKPWS--DELLSSFTTSLSKTTVFQTLRHIKV-PTKAFLFFN 106
Query: 94 FTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKL--KLFEVLVKTY 151
+ K H+ +Y ++ IL R + + AR+ + + + KL + F L+++Y
Sbjct: 107 WIHEKGF-SHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSY 165
Query: 152 RECG----------------SAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLS 193
E G +P V F+ ++ L+ + D ML + G+
Sbjct: 166 GEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYD--EMLKTYGVK 223
Query: 194 VKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNAL 253
T N LI + V G+ ++E+ D D P+V T+N L
Sbjct: 224 PDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCD----------------PDVVTYNTL 267
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCE---PDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
+ G R G + ++ M++ C+ PD +Y+ L+ +C ++ + EA + EEM
Sbjct: 268 VDGLCRAGKIKVAHNLVNGMSK-KCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNG 326
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-GLSGVESSSVTFEHLVNGYCRAGDVD 369
+ ++ ++V YNT+I G CE + + +E +M G G + TF L+N +C AG++D
Sbjct: 327 RGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLD 386
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDK------RRVFEALDILKARVVKFGLFPTE 423
A V+ +M + + ++ VLI LC K +F+ L + + +G P
Sbjct: 387 EAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLA 446
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKG------------------------------ 453
SY + + LCE GK ++A +V +++ +G
Sbjct: 447 ASYKCMFQYLCENGKTKKAERVLRQLMKRGTQDPLSYQIVILGHCKEGSYENGYGLLVWM 506
Query: 454 ----FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
F P ++IY IDG++++ +L KE E ++
Sbjct: 507 LRRDFLPDIDIYDYLIDGFLRKD----KPLLAKETLEKMLK 543
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 97/525 (18%), Positives = 193/525 (36%), Gaps = 126/525 (24%)
Query: 68 GLTPTQFSQIAL--GLKNNPHLALRFFSFTQHKSL-CKHSLSSYATIIHILSRARLIGPA 124
G+ P ++ L G N + F+ F + S C + +Y T++ L RA I A
Sbjct: 221 GVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVA 280
Query: 125 RDVIR-VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDI 183
+++ ++ + + P + + L++ Y C + ++++ +DI
Sbjct: 281 HNLVNGMSKKCKDLSPDVVTYTTLIRGY----------------CRK----QEVDEALDI 320
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG--------------LDSDA 229
+ + RGL + T N LI + + EI ++ G ++S
Sbjct: 321 LEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHC 380
Query: 230 TAGIGKDVKRV------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM-------ARL 276
AG + +V + V + +++ L+ ++G + K E ++ E+ +
Sbjct: 381 CAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSY 440
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH--------------------- 315
G +P SY + CE + ++AE++ ++ + +
Sbjct: 441 GPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQDPLSYQIVILGHCKEGSYENGY 500
Query: 316 -------------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
D+ Y+ +I GF + A+E +M S + + T+ ++N
Sbjct: 501 GLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRL 560
Query: 363 CRAGDV--DSAILV------------YNDMC-----RKGFEPEGSTIEVLIGE------- 396
G V + ++V ++ C +G + + I LI +
Sbjct: 561 LEQGCVHESAGVIVMMLERNIRQNINFSTKCLQLLFDRGLQDKAFKITELIYKNGFCVKM 620
Query: 397 ------LCDKRRVFEALDILKARVVKFGLFPTEKSYMFL----IKGLCEEGKMEEALKVQ 446
LC+KRR EA +++ F L E + L I LC+ K EA +
Sbjct: 621 DEVVQFLCNKRRALEA-----CKLLLFSLKNNENIDIGLCNIVILDLCKLNKASEAFSLC 675
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
E+V KG L + + G E A + K + ++RQ
Sbjct: 676 YELVDKGLHQDLICLNDLVAALEAGGRTEEAAFISKRVPRPELRQ 720
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 127/250 (50%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ +TFN L+ + G +K ++ EM G +PD +Y ++A C +M +A
Sbjct: 390 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 449
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + +M D+ V D AYN +I GFC G + +A+E E+ +G+ V F ++N
Sbjct: 450 EKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G V A +++ G P+ +L+ C ++ +AL + A +V G+ P
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA-MVSAGIEPN 568
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y L+ G C+ G+++E L + EM+ +G +PS +YS IDG + G A +
Sbjct: 569 VVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFH 628
Query: 483 EMFENQVRQE 492
EM E+ + +
Sbjct: 629 EMTESGIAMD 638
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 142/298 (47%), Gaps = 17/298 (5%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+ D+ + ++ RG+ + T N+++ + + + + R++
Sbjct: 235 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN------------ 282
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
RV PN T+N L+ G+ G +++ V+ EM R PD + S+LM C+
Sbjct: 283 ----KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 338
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+++EA +++ M K DV +YN ++ G+ G + + F M G+ TF
Sbjct: 339 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFN 398
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L+ Y G +D A++++N+M G +P+ T +I LC ++ +A++ +++
Sbjct: 399 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFN-QMID 457
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
G+ P + +Y LI+G C G + +A ++ +E++ G + +S+ I+ K G V
Sbjct: 458 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 126/250 (50%), Gaps = 3/250 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG--CEPDCYSYSVLMAVFCEERRMREAE 302
P+V +++ L+ +G + +D+ MA G C P+ +Y+ ++ F +E + +A
Sbjct: 180 PDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKAC 239
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++EM + + D+V YN+++ C+ M +AE F R+M V ++ T+ +L+ GY
Sbjct: 240 DLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGY 299
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G A+ V+ +M R P+ T+ +L+G LC ++ EA D+ +K G P
Sbjct: 300 SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK-GQNPD 358
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY ++ G +G + + + M+G G P ++ I Y G ++ A ++
Sbjct: 359 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 418
Query: 483 EMFENQVRQE 492
EM ++ V+ +
Sbjct: 419 EMRDHGVKPD 428
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 34/277 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV +N ++ GF++EG K D++ EM + G PD +Y+ ++ C+ R M +AE
Sbjct: 217 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 276
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M +K V + YN +I G+ G+ A F+EM + VT L+ C+
Sbjct: 277 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFEAL----------- 407
G + A V++ M KG P+ + +++ G L D +F+ +
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 396
Query: 408 -DIL-----------KARVV-----KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
++L KA ++ G+ P +Y +I LC GKM++A++ +M+
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+G P Y+ I G+ G++ A L E+ N
Sbjct: 457 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNN 493
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 156/361 (43%), Gaps = 46/361 (12%)
Query: 139 PKLKLFEVLVKTYRECG---SAPFVFD----------------LLIKCCLEVKNIEKIET 179
P F VL+K Y CG A +F+ ++ C I K++
Sbjct: 392 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC----RIGKMDD 447
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
++ ++ +G++ N LI ++ E+ E+ G+ D+
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM------NNGMHLDIV- 500
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
F++++ + G ++++ +G PD YS+LM +C +M
Sbjct: 501 ---------FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKME 551
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A ++++ M +E +VV Y T++ G+C+IG + FREM G++ S++ + ++
Sbjct: 552 KALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIII 611
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVK 416
+G +AG A + +++M G + T +++ L R EA+ + L+A VK
Sbjct: 612 DGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVK 671
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
+ +I G+ + ++EEA + A + PS+ YS I +KEG VE
Sbjct: 672 INIITLNT----MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEE 727
Query: 477 A 477
A
Sbjct: 728 A 728
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 157/352 (44%), Gaps = 26/352 (7%)
Query: 125 RDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVD 182
R VI R + D ++ F ++ G AP + ++ LI+ ++ K + +
Sbjct: 433 RTVIAALCRIGKMDDAMEKFNQMIDQ----GVAPDKYAYNCLIQGFCTHGSLLKAK---E 485
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
++ +M+ G+ + + +++I + + V+ I+ D T +G
Sbjct: 486 LISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF--------DLTVNVG-------- 529
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ ++ LM G+ G EK V+ M G EP+ Y L+ +C+ R+ E
Sbjct: 530 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 589
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ EM + ++ + Y+ II G + G A+ F EM SG+ T+ ++ G
Sbjct: 590 SLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGL 649
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ D AI ++ ++ + T+ +I + RRV EA D+ A + + L P+
Sbjct: 650 FKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF-ASISRSRLVPS 708
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+Y +I L +EG +EEA + + M G EP+ + + + +K+ +
Sbjct: 709 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEI 760
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
R G + +S T+ L++ RA + A+ + + R G L+ C+
Sbjct: 100 RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEA 159
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA---LKVQAEMVGKGFEPS 457
+R EALDIL R + G P SY L+K LC++GK +A L++ AE G P+
Sbjct: 160 KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG-GAVCSPN 218
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ Y+ IDG+ KEG+V A L KEM + +
Sbjct: 219 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI 250
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 76/168 (45%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ T+N ++ G ++ F++ ++ E+ + + + + + ++ + RR+ EA+ L+
Sbjct: 638 DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 697
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ + VV Y+ +I + G + AE+ F M +G E +S H+V +
Sbjct: 698 ASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKK 757
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
++ A + + + F E T +L+ K E + L A+
Sbjct: 758 NEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFLPAK 805
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 208/502 (41%), Gaps = 77/502 (15%)
Query: 21 QLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTP--TQFSQIA 78
QLL + S+S PP+ ++N + + L + + L S+ +G P + ++ +
Sbjct: 577 QLLEGMN-SNSFPPNIITYNTV--LDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVM 633
Query: 79 LGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND 138
GL L F+ F Q K + ++ TI+ R+ L+ A +R + P D
Sbjct: 634 YGLVKEDRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQP--D 691
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
K+ V L++ L+ EK ++ + S GL +
Sbjct: 692 SKVDRSSV---------------HSLMEGILKRDGTEK---SIEFAENIASSGLLLDDLF 733
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
+ +I + + K ++ +E+ ++ L G ++NAL+ G
Sbjct: 734 LSPIIRHLCKHKEALAAHELVKKFENLGVSLKTG----------------SYNALICGLV 777
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
E + E+++ EM RLGC+PD ++Y +++ + R+ + K+ EEM +K + V
Sbjct: 778 DEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYV 837
Query: 319 AYNTIIGGFCEI-----------------------------------GEMARAEEFFREM 343
YNTII G + G + AE F EM
Sbjct: 838 TYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEM 897
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G E + + L+NGY AGD + ++ M +G P+ + V+I LC R+
Sbjct: 898 LECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRL 957
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
+ L K ++ GL P +Y LI GL + G++EEAL + +M KG P+L Y++
Sbjct: 958 NDGLSYFK-QLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNS 1016
Query: 464 FIDGYMKEGNVEMATMLRKEMF 485
I K G A + +E+
Sbjct: 1017 LILYLGKAGKAAEAGKMYEELL 1038
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 1/230 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P V T++ LM+ F + E V + EM G P+ YSY++ + V + R+ EA
Sbjct: 202 VVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAY 261
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ +M ++ + DVV +I C+ G +A A++ F +M S + VT+ L++
Sbjct: 262 RILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKC 321
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+GD S ++N + G+ + + LC RV EALD+ K G+ P
Sbjct: 322 GDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQK-GIIPQ 380
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ SY LI G + + AL++ M G P+ + FI+ + K G
Sbjct: 381 QYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSG 430
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 116/243 (47%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P +++N+L+ GF + F + +++ M G P+ Y++ + + + +A K
Sbjct: 379 PQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKR 438
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E M+ K + DVVA N ++ G + G + A+ F E+ G+ ++T+ ++ +
Sbjct: 439 YELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSK 498
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A + D A+ ++ +M P+ + LI L R EA I + + L PT+
Sbjct: 499 ASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFY-ELKEMNLEPTDC 557
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L+ GL EGK++E +++ M F P++ Y+ +D K G V A + M
Sbjct: 558 TYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSM 617
Query: 485 FEN 487
N
Sbjct: 618 TMN 620
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 104/242 (42%), Gaps = 7/242 (2%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +T+N L+ + G + DV+ MA G P +YSVLM F + R L
Sbjct: 170 NAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLL 229
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM + V +V +Y I + G + A R+M G + VT L+ C A
Sbjct: 230 GEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDA 289
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLI---GELCDKRRVFEALDILKARVVKFGLFPT 422
G + A V+ M +P+ T L+ G+ D R V E + LKA G
Sbjct: 290 GRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKAD----GYNDN 345
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY + LC+ G+++EAL V EM KG P Y++ I G++K A L
Sbjct: 346 VVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFN 405
Query: 483 EM 484
M
Sbjct: 406 HM 407
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 5/234 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V NA++ G + G + V+ E+ +G PD +Y++++ + EA
Sbjct: 447 IVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAM 506
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++ EM + DV+A N++I + G A + F E+ +E + T+ L+ G
Sbjct: 507 KIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGL 566
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
R G V + + M F P T ++ LC V ALD+L + + G P
Sbjct: 567 GREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMN-GCMPD 625
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEM---VGKGFEPSLEIYSAFI-DGYMKEG 472
SY ++ GL +E +++EA + +M + + I +F+ G MKE
Sbjct: 626 LSSYNTVMYGLVKEDRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEA 679
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 140/364 (38%), Gaps = 73/364 (20%)
Query: 203 IWEVSRGKGVISG---YEIYREVFGLDSDATAGIGKDVKRVVR-VRPNVHTFNALMVGFY 258
+++ GV+ Y + FG DA +G + R VRPNV+++ +
Sbjct: 193 VYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLG 252
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE---------------- 302
+ G E+ + +M GC+PD + +VL+ + C+ R+ +A+
Sbjct: 253 QAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRV 312
Query: 303 -------------------KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
++W ++ +VV+Y + C++G + A + F EM
Sbjct: 313 TYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEM 372
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GEL 397
G+ ++ L++G+ +A + A+ ++N M G P G T + I GE
Sbjct: 373 KQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGES 432
Query: 398 CDKRRVFEAL-------DILKARVVKFGLF---------------------PTEKSYMFL 429
+ +E + D++ V +GL P +Y +
Sbjct: 433 LKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMM 492
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
IK + +EA+K+ AEM+ P + ++ ID K G A + E+ E +
Sbjct: 493 IKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNL 552
Query: 490 RQED 493
D
Sbjct: 553 EPTD 556
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 117/248 (47%), Gaps = 8/248 (3%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
R +VH+ LM G + EK + +A G D S ++ C+ + A +
Sbjct: 696 RSSVHS---LMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHE 752
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L ++ + V +YN +I G + + AEE F EM G + T+ +++
Sbjct: 753 LVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMG 812
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
++ ++ + + +M KG++ T +I L + + EA++ L +++ G PT
Sbjct: 813 KSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAIN-LYYQLMSEGFSPTP 871
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ GL ++G +E+A + EM+ G EP+ IY+ ++GY G+ E E
Sbjct: 872 CTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVC----E 927
Query: 484 MFENQVRQ 491
+FE+ V Q
Sbjct: 928 LFESMVEQ 935
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 7/188 (3%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +N L+ G+ G EKV +++ M G PD SY+V++ C + R+ +
Sbjct: 904 PNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSY 963
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++++ D +E D++ YN +I G + G + A + +M G+ + T+ L+ +
Sbjct: 964 FKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGK 1023
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLFP 421
AG A +Y ++ KG++P T LI F A R++ G P
Sbjct: 1024 AGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAY----GRMIVGGCRP 1079
Query: 422 TEKSYMFL 429
+YM L
Sbjct: 1080 NSSTYMQL 1087
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 120/278 (43%), Gaps = 38/278 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ ++N +M G +E ++ ++ +M ++ PD + ++ F M+EA
Sbjct: 624 PDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEALHT 682
Query: 305 WEEM----------------------RD---KNVEH-----------DVVAYNTIIGGFC 328
E RD K++E D + + II C
Sbjct: 683 VREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLC 742
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ E A E ++ GV + ++ L+ G +D A ++++M R G +P+
Sbjct: 743 KHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEF 802
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
T +++ + R+ + L I + + G T +Y +I GL + ++EA+ + +
Sbjct: 803 TYHLILDAMGKSMRIEDMLKI-QEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQ 861
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
++ +GF P+ Y +DG +K+GN+E A L EM E
Sbjct: 862 LMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLE 899
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 71/147 (48%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ ++ ++ +G + ++ +G EPD +Y++L+ + R+ EA
Sbjct: 937 MNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEAL 996
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ +M K + ++ YN++I + G+ A A + + E+ G + + T+ L+ GY
Sbjct: 997 SLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGY 1056
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGST 389
+G ++A Y M G P ST
Sbjct: 1057 SVSGSPENAFAAYGRMIVGGCRPNSST 1083
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 98/213 (46%), Gaps = 1/213 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P+V N+L+ Y+ G + ++ E+ + EP +Y+ L+A E +++E
Sbjct: 516 RCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEV 575
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L E M + +++ YNT++ C+ GE+ A + M ++G ++ ++ G
Sbjct: 576 MQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYG 635
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ +D A ++ M +K P+ +T+ ++ + EAL ++ +++
Sbjct: 636 LVKEDRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKV 694
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
S L++G+ + E++++ + G
Sbjct: 695 DRSSVHSLMEGILKRDGTEKSIEFAENIASSGL 727
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 112/251 (44%), Gaps = 6/251 (2%)
Query: 204 WEVSRGKGVISGYEIYREV-FGLDSDATAGIGKDV---KRVVRVRPNVHTFNALMVGFYR 259
+E+ + KG++ V +GL G+ K V + + + P+ T+ ++ +
Sbjct: 439 YELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSK 498
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
++ ++ EM C PD + + L+ + + R EA K++ E+++ N+E
Sbjct: 499 ASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCT 558
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YNT++ G G++ + M + + +T+ +++ C+ G+V+ A+ + M
Sbjct: 559 YNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMT 618
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
G P+ S+ ++ L + R+ EA + +K L P + ++ G M
Sbjct: 619 MNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQ--MKKVLAPDYATVCTILPSFVRSGLM 676
Query: 440 EEALKVQAEMV 450
+EAL E +
Sbjct: 677 KEALHTVREYI 687
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 119/281 (42%), Gaps = 36/281 (12%)
Query: 97 HKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALR---SPE------------NDPKL 141
H K + +Y TII L +++++ A ++ + SP D +
Sbjct: 828 HNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNI 887
Query: 142 KLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC 199
+ E L ECG P ++++L+ + EK+ ++ ++ +G++ + +
Sbjct: 888 EDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKV---CELFESMVEQGMNPDIKSY 944
Query: 200 NALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYR 259
+I + + G ++++ + + P++ T+N L+ G +
Sbjct: 945 TVVIDTLCADGRLNDGLSYFKQLTDMG----------------LEPDLITYNLLIHGLGK 988
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G E+ ++ +M + G P+ Y+Y+ L+ + + EA K++EE+ K + +V
Sbjct: 989 SGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFT 1048
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
YN +I G+ G A + M + G +S T+ L N
Sbjct: 1049 YNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPN 1089
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 145/280 (51%), Gaps = 40/280 (14%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ ++N+L+ GF G +E+ + + EM G +PD +++VL+ C+E ++ EA+KL
Sbjct: 248 PSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 307
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M + + D+V YN++I GFC +G++ A E F M G E +++ L+NGY +
Sbjct: 308 LGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSK 367
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFEALDILKARVV--- 415
V+ A+ +YN+M G P T + L+ G++ D +++F ++KA +
Sbjct: 368 TLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFS---VMKAHGIAEN 424
Query: 416 --KFG-----------------LFPTEKSYMF---------LIKGLCEEGKMEEALKVQA 447
+G LF KS F LI GLC+ GK+E A ++
Sbjct: 425 SYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE 484
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++ +G EP++ Y+ I G+ +EG V+ A +L ++M N
Sbjct: 485 KLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEAN 524
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 219/485 (45%), Gaps = 47/485 (9%)
Query: 27 STSSSTPPSDQSHNLIATVVSLLTHHRSKSRWN----HLLSLCRSG-LTPTQ-FSQIALG 80
STS++ P + N + + SL TH + N L C++G +T T L
Sbjct: 3 STSNTVPSASSIRN--SNLSSLFTHSSAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLM 60
Query: 81 LKNNPHLALRFFSFTQHKSLCKHSLSSYATIIH------ILSRARLIGPARD--VIRVAL 132
+++ P +L F+ H LS A I H + ++ RL G + D + + L
Sbjct: 61 MRSTPTPSLSSFN---------HLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111
Query: 133 RSPENDPKLKL-FEVLVKTYRECGSAPFV--FDLLIK-CCLEVKNIEKIETCVDIVRMLM 188
N +L+ F R G +P + ++ LIK C+E +I + +
Sbjct: 112 NCLCNVNRLREGFAAFAGILRR-GYSPNIVTYNTLIKGLCME----HRISEATRLFLRMQ 166
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV-VRVRPNV 247
G + V T LI + + ++++E+ D+ R + +PNV
Sbjct: 167 KLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEML-----------NDISRYEINCKPNV 215
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
T+N ++ G + G ++ + ++ EM G P SY+ L+ FC + E+++L +E
Sbjct: 216 ITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDE 275
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M D+ ++ D+V +N +I C+ G++ A++ M SG+ VT+ L+ G+C GD
Sbjct: 276 MLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGD 335
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
++SA ++ M KG EP+ + VLI +V EA+ + ++ G P +Y
Sbjct: 336 LNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLL-VGKRPNVITYD 394
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
L+KG+ GK+++A K+ + M G + Y F+DG K + A L E+ +
Sbjct: 395 SLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSS 454
Query: 488 QVRQE 492
+ E
Sbjct: 455 NFKLE 459
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 125/250 (50%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+N+L+ GF G +++V M GCEPD SY+VL+ + + ++ EA
Sbjct: 316 IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAM 375
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL+ EM +V+ Y++++ G G++ A++ F M G+ +S T+ ++G
Sbjct: 376 KLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGL 435
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ + A+ ++ ++ F+ E + LI LC ++ A ++ + ++ G P
Sbjct: 436 CKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE-KLSNEGHEPN 494
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I G C EG++++A + +M G P + Y+ + G+ + +E L
Sbjct: 495 VVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLH 554
Query: 483 EMFENQVRQE 492
M + V +
Sbjct: 555 RMAQKDVSPD 564
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 121/257 (47%), Gaps = 17/257 (6%)
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVH 248
S+G V + N LI S+ V ++Y E+ +V RPNV
Sbjct: 348 SKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEML----------------LVGKRPNVI 391
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+++L+ G + G + + ++ M G + Y+Y + + C+ + EA KL+ E+
Sbjct: 392 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 451
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ N + ++ N +I G C+ G++ A E F ++ G E + VT+ +++G+CR G V
Sbjct: 452 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 511
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D A ++ M G P+ T L+ + ++ E + +L R+ + + P +
Sbjct: 512 DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLH-RMAQKDVSPDAITCSI 570
Query: 429 LIKGLCEEGKMEEALKV 445
++ L ++ K +E L +
Sbjct: 571 VVDMLSKDEKYQECLHL 587
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 123/234 (52%), Gaps = 9/234 (3%)
Query: 245 PNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
PNV TFN+++ G + AF+ V+ M PD ++++L+A C+ +
Sbjct: 326 PNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLV----PDKVTFNILIAGACKAGNFEQ 381
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L+EEM KN++ DV+ + +I G C+ G++ A + MG GV + VT+ LV+
Sbjct: 382 ASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVH 441
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C++G ++ +M G PE T L+ LC R +AL ++ +++ FG
Sbjct: 442 GLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLV-SKLKSFGWD 500
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
P +Y L+ GL + GK E+A+ V EMVGKG +P ++A G + GN+
Sbjct: 501 PDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNL 554
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 36/275 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+NAL+ G + E+ + M G PD +YSVL+ FC+ R+ EA +L
Sbjct: 256 PNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 315
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCE----------------------------------- 329
M + +VV +N+II G C+
Sbjct: 316 LHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACK 375
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G +A F EM ++ +TF L++G C+AG V++A + + M G P T
Sbjct: 376 AGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 435
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
VL+ LC R+ E + L+ +V G P +Y L+ LC + ++AL++ +++
Sbjct: 436 YNVLVHGLCKSGRIEEPCEFLE-EMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKL 494
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G++P Y+ +DG K G E A + +EM
Sbjct: 495 KSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEM 529
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 156/350 (44%), Gaps = 55/350 (15%)
Query: 181 VDIVRMLMSR-GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
++I R M+R G++ + T N +I + + + +G E++ E+ VKR
Sbjct: 65 LEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL--------------VKR 110
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
P+V T+N L+ + G E+ + M+ GC P+ +YSVL+ C+ R+
Sbjct: 111 --GHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRID 168
Query: 300 EAEKLWEEMRDK--NVEHDVVAYNTIIGGFCEIGEMARAEEFFREM--GLSGVESSSVTF 355
EA +L +EM K +V +++ YN+ + G C+ A A E R + G V +VTF
Sbjct: 169 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 228
Query: 356 EHLVNGYCRAGDVDSA-------------ILVYN--------------------DMCRKG 382
L++G C+ G D A ++ YN M KG
Sbjct: 229 STLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKG 288
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
P+ T VL+ C RV EAL++L + G P ++ +I GLC+ + EA
Sbjct: 289 VTPDVITYSVLVDAFCKASRVDEALELLHGMASR-GCTPNVVTFNSIIDGLCKSDRSGEA 347
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
++ ++ + P ++ I G K GN E A+ L +EM ++ +
Sbjct: 348 FQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPD 397
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 122/251 (48%), Gaps = 6/251 (2%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVW-VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
+V +N ++ R G + +++ EMAR G P +Y+ ++ C+ + +L
Sbjct: 44 SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EE+ + DVV YNT+I C+ G++ A M G + VT+ L+NG C+
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163
Query: 365 AGDVDSAILVYNDMCRKGFE--PEGSTIEVLIGELCDKRRVFEALDILKA-RVVKFGLFP 421
G +D A + +M RK + P T + LC + EA +++++ R + P
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 223
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
++ LI GLC+ G+ +EA +M+ G+ P++ Y+A ++G K +E A +
Sbjct: 224 DTVTFSTLIDGLCKCGQTDEA--CNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMI 281
Query: 482 KEMFENQVRQE 492
+ M + V +
Sbjct: 282 ESMVDKGVTPD 292
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 115/248 (46%), Gaps = 11/248 (4%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+RV P+ TF+ L+ G + G + E +M G P+ +Y+ L+ C+ +M
Sbjct: 219 LRVSPDTVTFSTLIDGLCKCGQTD--EACNDDMIAGGYVPNVVTYNALVNGLCKADKMER 276
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A + E M DK V DV+ Y+ ++ FC+ + A E M G + VTF +++
Sbjct: 277 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 336
Query: 361 GYC---RAGDV-DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
G C R+G+ A+ VYN M P+ T +LI C K FE L +V
Sbjct: 337 GLCKSDRSGEAFQIALQVYNRM----LVPDKVTFNILIAGAC-KAGNFEQASALFEEMVA 391
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
+ P ++ LI GLC+ G++E A + M G P++ Y+ + G K G +E
Sbjct: 392 KNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEE 451
Query: 477 ATMLRKEM 484
+EM
Sbjct: 452 PCEFLEEM 459
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 141/348 (40%), Gaps = 59/348 (16%)
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
+LL+ N +++ C ++ R S V+ N ++ + R EI+R
Sbjct: 13 NLLVPITTATINTQRVNLCP--LKFFFVRSSSRSVADYNIVLQSLCRAGETARALEIFRG 70
Query: 222 VFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
D V P + T+N ++ G + +++ E+ + G PD
Sbjct: 71 EMARDG---------------VAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPD 115
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
+Y+ L+ C+ + EA +L M + +VV Y+ +I G C++G + A E +
Sbjct: 116 VVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQ 175
Query: 342 EM---------------------------------------GLSGVESSSVTFEHLVNGY 362
EM G V +VTF L++G
Sbjct: 176 EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 235
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G D A +DM G+ P T L+ LC ++ A ++++ V K G+ P
Sbjct: 236 CKCGQTDEA--CNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDK-GVTPD 292
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+Y L+ C+ +++EAL++ M +G P++ +++ IDG K
Sbjct: 293 VITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCK 340
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++P+V TF AL+ G + G E D+ M LG P+ +Y+VL+ C+ R+ E
Sbjct: 393 NMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEP 452
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ EEM + + Y +++ C A + ++ G + +VT+ LV+G
Sbjct: 453 CEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDG 512
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
++G + AI V +M KG +P+ T G L + +++L+ + K G+ P
Sbjct: 513 LWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAK-GMLP 571
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 112/260 (43%), Gaps = 20/260 (7%)
Query: 136 ENDPKLKLFEVLVKTY-RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSV 194
++D + F++ ++ Y R F++LI + N E+ + ++++ +
Sbjct: 340 KSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASA---LFEEMVAKNMQP 396
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALM 254
V T ALI + + V E R++ D+ + V PNV T+N L+
Sbjct: 397 DVMTFGALIDGLCKAGQV----EAARDIL------------DLMGNLGVPPNVVTYNVLV 440
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
G + G E+ + EM GC P+ +Y L+ C R +A +L +++ +
Sbjct: 441 HGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWD 500
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
D V YN ++ G + G+ +A EM G + S TF G R+G++ + +
Sbjct: 501 PDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMEL 560
Query: 375 YNDMCRKGFEPEGSTIEVLI 394
+ KG P+ +T ++
Sbjct: 561 LRVVLAKGMLPDATTCSSIL 580
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 130/251 (51%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V TFN L+ + G EK V +M + G + D S+ ++ FC+ ++ EA
Sbjct: 257 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 316
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ ++M K+V + YN+II + E G+ +A +M SGV +S VT+ L+ G
Sbjct: 317 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGL 376
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR+ +D A + + +G P+ + +I C+K +AL++L+ + K+G+ PT
Sbjct: 377 CRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQ-EMNKYGIRPT 435
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++Y L+ L G++ + + +M+ K EPS IY +D Y++ N L+K
Sbjct: 436 LRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKK 495
Query: 483 EMFENQVRQED 493
EM E + +D
Sbjct: 496 EMSEKGIAFDD 506
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 118/237 (49%), Gaps = 36/237 (15%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
+T + L+ G ++G K E V + G P Y+ L+ +C+ R +R A ++E+
Sbjct: 157 YTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQ 216
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M+ +++ D + YN +I G C++ + +AE+ EM SGV+ S TF L++ Y AG
Sbjct: 217 MKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQ 276
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
++ V +DM +KG +K+ V+ FG
Sbjct: 277 LEKCFTVLSDMQQKG---------------------------IKSDVISFG--------- 300
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++K C+ GK+ EA+ + +M+ K P+ ++Y++ ID Y++ G+ E A +L ++M
Sbjct: 301 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 357
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 118/271 (43%), Gaps = 13/271 (4%)
Query: 231 AGIGKDVKRV------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+G G D +V + V PN T+N ++ G + G E + +M G +P+ +
Sbjct: 29 SGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVT 88
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+VL++ C RM E L +EM ++ D Y+ + G GE F E
Sbjct: 89 YNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESL 148
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKR 401
GV + T L+NG C+ G V A V + G P LI C D R
Sbjct: 149 KKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLR 208
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
F + +K+R ++ P +Y LI GLC+ + +A + EM G +PS+E +
Sbjct: 209 GAFCIFEQMKSRHIR----PDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF 264
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ ID Y G +E + +M + ++ +
Sbjct: 265 NTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 295
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 109/245 (44%), Gaps = 1/245 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ ++N ++ G +R G V+ EM +G P+ +Y+ ++ + + +L
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M + ++V YN ++ G C G M EM + T+ L +G R
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ + + ++ + +KG T +L+ LC +V +A +L+ +V GL PT
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEM-LVHTGLVPTTV 192
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G C+ + A + +M + P Y+A I+G K V A L EM
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 252
Query: 485 FENQV 489
++ V
Sbjct: 253 EKSGV 257
>gi|224076898|ref|XP_002305039.1| predicted protein [Populus trichocarpa]
gi|222848003|gb|EEE85550.1| predicted protein [Populus trichocarpa]
Length = 800
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 197/424 (46%), Gaps = 26/424 (6%)
Query: 71 PTQFSQIA---LGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDV 127
P Q +I LKN PHLA FS ++ + +YA II IL G + +
Sbjct: 63 PLQSHKIVDTLYNLKNQPHLAFSIFSHLKNPDI-----PAYAAIIRILCHW---GLHKML 114
Query: 128 IRVALRSPENDPKLKLFEV--LVKTYRECGSAPFVFDLLIKCCLEVKNIEK--IETCVDI 183
+ L +N+ F++ L+ T S P D+ ++ VK+ I+ +
Sbjct: 115 HSIFLHLHQNNNDFTSFDISHLLDTL----SLPHHIDIDLEKEDTVKHRSSFLIQVYDAL 170
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSRG---KGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
V+ ++ G+ + NAL RG Y + + + DA I K +K +
Sbjct: 171 VKSYVTAGMLDE--AINALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYKQLKSL 228
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ PN +T++ ++ F R+G+ + +V+ EM G P+ Y+Y+ + C +R
Sbjct: 229 -GLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQRSDF 287
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
++ + ++ N+ DV AY +I GFC +M RAE +M + S + + L+
Sbjct: 288 GYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYSELIR 347
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
GYC+AGD+ A+ ++NDM KG + + ++ C+K + ++ K R +F
Sbjct: 348 GYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFK-RFKDLRIF 406
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
E SY ++ LC+ K+++A+ + EM GK + + Y+ I+GY G + A +
Sbjct: 407 LDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRV 466
Query: 481 RKEM 484
+EM
Sbjct: 467 FEEM 470
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 11/245 (4%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V TFN L+ F R G + ++ M +P+ +++V++ C ++ EAE
Sbjct: 475 LEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAE 534
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ M DK++++ Y +I G+CE +A E F E+ G+ L+
Sbjct: 535 AFFCNMEDKSIDN----YGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKL 590
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG---ELCDKRRVFEALDILKARVVKFGL 419
C G+ D A+ + M EP +I D R DIL+ K GL
Sbjct: 591 CEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVFDILR----KSGL 646
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y +I C + ++ EA + +M +G +P L ++ +DG++K + E
Sbjct: 647 TPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLKRVHSEAFAR 706
Query: 480 LRKEM 484
RKE+
Sbjct: 707 KRKEV 711
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 32/266 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ N + ++ F +G +V + + L D SY++++ C+ ++ +A
Sbjct: 370 IKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSYNIVVDALCKLEKVDQAV 429
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM+ K ++ D++ Y T+I G+C +G++ A F EM G+E VTF L+ +
Sbjct: 430 ALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAF 489
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA-----------LDILK 411
R G + A+ +Y M + +P T V+I LC +V EA +D
Sbjct: 490 SRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAEAFFCNMEDKSIDNYG 549
Query: 412 ARVVKF-------------------GLFPTEKSYMF-LIKGLCEEGKMEEALKVQAEMVG 451
A + + GL ++ Y++ L++ LCEEG+ + AL + M+
Sbjct: 550 AMITGYCEAKHTEKASELFFELSERGLL-MDRGYIYKLLEKLCEEGEKDRALWLLKTMLD 608
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMA 477
EPS ++Y I + G++ A
Sbjct: 609 LNMEPSKDMYGKVITACYRAGDMRNA 634
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 119/248 (47%), Gaps = 11/248 (4%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
++ L+ G+ + G K + +M G + +C S ++ FCE+ + + ++ +
Sbjct: 342 YSELIRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFK 401
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
D + D V+YN ++ C++ ++ +A EM ++ + + L+NGYC G +
Sbjct: 402 DLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLV 461
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVKFGLFPTEKSY 426
A V+ +M KG EP+ T +L+ + EAL + +K++ +K P ++
Sbjct: 462 DAFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLK----PNAITH 517
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+I+GLC GK+ EA M K S++ Y A I GY + + E A+ L E+ E
Sbjct: 518 NVMIEGLCIGGKVTEAEAFFCNMEDK----SIDNYGAMITGYCEAKHTEKASELFFELSE 573
Query: 487 NQVRQEDG 494
+ + G
Sbjct: 574 RGLLMDRG 581
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 16/244 (6%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ + A++ G+ EK +++ E++ G D L+ CEE A L
Sbjct: 544 SIDNYGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEGEKDRALWLL 603
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M D N+E Y +I G+M AE F + SG+ T+ ++N CR
Sbjct: 604 KTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQ 663
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLI-GELCDKRRVFEALDILKARVVKFG------ 418
+ A ++ DM +G +P+ T VL+ G L +RV K + V
Sbjct: 664 NRLSEARNLFQDMKHRGIKPDLVTFTVLLDGHL---KRVHSEAFARKRKEVNLAASNIWK 720
Query: 419 ------LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ P Y LI G C+ ++E+A+ + EM+ +G EP +A + G G
Sbjct: 721 EMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYRGVEPDRATCTALLSGCRNRG 780
Query: 473 NVEM 476
+V+M
Sbjct: 781 DVDM 784
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ + P+ + ++ YR G E V+ + + G PD ++Y+ ++ V C + R+ E
Sbjct: 609 LNMEPSKDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSE 668
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCE---IGEMAR--------AEEFFREMGLSGVE 349
A L+++M+ + ++ D+V + ++ G + AR A ++EM + +
Sbjct: 669 ARNLFQDMKHRGIKPDLVTFTVLLDGHLKRVHSEAFARKRKEVNLAASNIWKEMQNTEIR 728
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
+ + L++G+C+ ++ AI +Y++M +G EP+ +T L+
Sbjct: 729 PDVICYTALIDGHCKVDRLEDAIGLYDEMMYRGVEPDRATCTALL 773
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM------ 289
D+ R + P++ T+ ++ R+ + +++ +M G +PD +++VL+
Sbjct: 639 DILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLKR 698
Query: 290 ---AVFCEERR--MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
F +R+ A +W+EM++ + DV+ Y +I G C++ + A + EM
Sbjct: 699 VHSEAFARKRKEVNLAASNIWKEMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMM 758
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
GVE T L++G GDVD + N
Sbjct: 759 YRGVEPDRATCTALLSGCRNRGDVDMVLTKLN 790
>gi|222641578|gb|EEE69710.1| hypothetical protein OsJ_29377 [Oryza sativa Japonica Group]
Length = 577
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 143/303 (47%), Gaps = 23/303 (7%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++ RG+ V T N LI V +E++ ++ V R R+ PN
Sbjct: 164 MLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQM--------------VAR--RIDPN 207
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T+ ++ E E +++EM G P+ Y+Y+ LM+ + ++ A +
Sbjct: 208 VVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYY 267
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
++ + + V + T+I G C+ + A+ F +M V + + L++G R+G
Sbjct: 268 DLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSG 327
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
A+ + ++ RKG P+ T +++ LCD + R+ + G+ P +Y
Sbjct: 328 YAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDAL-------VTCTRMSEVGVEPHVVTY 380
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI G + G+ME A+ + EMV KG EP++ Y+A I G+ K G+++ A L+KEM E
Sbjct: 381 SSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEE 440
Query: 487 NQV 489
+
Sbjct: 441 KGI 443
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 121/253 (47%), Gaps = 11/253 (4%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P V +N+L+ G +R G ++ + E+ R G PD ++ S+++ C+ A
Sbjct: 309 VAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCD------AL 362
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
M + VE VV Y+++I G + GEM A + EM GVE + VT+ L++G+
Sbjct: 363 VTCTRMSEVGVEPHVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGH 422
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL-----KARVVKF 417
+ GD+D+A + +M KG T+ VL+ LC + RV +A+ + + + K
Sbjct: 423 AKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKN 482
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+YM LI GL +G+ EA + M G P Y+ I G G V A
Sbjct: 483 PSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNA 542
Query: 478 TMLRKEMFENQVR 490
ML +M + V+
Sbjct: 543 MMLYADMVKVGVK 555
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 111/253 (43%), Gaps = 36/253 (14%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+R P + NA++ G + +V +++ EM G P +Y+ L+ + + +
Sbjct: 132 LRELPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAK 191
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A ++W++M + ++ +VV Y T+I CE + AE F EM +G+ + T+ L++
Sbjct: 192 AWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMS 251
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
+ + ++ A++ Y D+ +K GL
Sbjct: 252 SHFKRDNIKHALVFYYDL------------------------------------LKCGLV 275
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P + + LI GLC+ ++ EA + +M P++ +Y++ I G + G + A
Sbjct: 276 PNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAF 335
Query: 481 RKEMFENQVRQED 493
+E+ +R ++
Sbjct: 336 FQEIIRKGLRPDE 348
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 11/191 (5%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V P+V T+++L+ G + G E ++ EM G EP+ +Y+ L+ + M
Sbjct: 371 VGVEPHVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDA 430
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS--------S 352
A L +EM +K + + + + ++ G C + A F E SG + S S
Sbjct: 431 AFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIME--YSGQKKSEKNPSIANS 488
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ L+ G G + A ++ M G P+ T ++I LC V A+ +L A
Sbjct: 489 VTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAM-MLYA 547
Query: 413 RVVKFGLFPTE 423
+VK G+ PT+
Sbjct: 548 DMVKVGVKPTK 558
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 135/246 (54%), Gaps = 1/246 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V F+AL+ F +EG + E++ EM + G PD +Y+ L+ FC+E ++ +A
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ + M K ++ +N +I G+C+ + E FR+M L GV + +VT+ L+ G
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C G ++ A ++ +M + P+ + ++L+ LCD +AL+I + ++ K +
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE-KIEKSKMEL 490
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y +I G+C K+++A + + KG +P ++ Y+ I G K+G++ A +L
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 482 KEMFEN 487
++M E+
Sbjct: 551 RKMEED 556
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 124/245 (50%), Gaps = 5/245 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+++ + ++ ++ G ++G+ + +++ EM G + D Y+ L+ FC R +
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KL +M + + DVVA++ +I F + G++ AEE +EM G+ +VT+ L++G
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C+ +D A + + M KG P T +LI C + + L++ + ++ G+
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR-GVVA 420
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI+G CE GK+E A ++ EMV + P + Y +DG G E A
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL--- 477
Query: 482 KEMFE 486
E+FE
Sbjct: 478 -EIFE 481
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 124/250 (49%), Gaps = 3/250 (1%)
Query: 237 VKRVVRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
V R+V + +P + T NAL+ G G + M G +P+ +Y ++ V C+
Sbjct: 165 VDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK 224
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ A +L +M ++ ++ D V Y+ II G C+ G + A F EM + G ++ +
Sbjct: 225 SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ G+C AG D + DM ++ P+ LI + ++ EA ++ K +
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK-EM 343
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
++ G+ P +Y LI G C+E ++++A + MV KG P++ ++ I+GY K +
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403
Query: 475 EMATMLRKEM 484
+ L ++M
Sbjct: 404 DDGLELFRKM 413
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 135/288 (46%), Gaps = 9/288 (3%)
Query: 206 VSRGKGVISGYEIYRE-VFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
VS GKG +S E R + + D + +++ R R RP + F+ L R ++
Sbjct: 31 VSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRS-RPRPRLIDFSRLFSVVARTKQYD 89
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
V D+ +M G + Y+ S+++ C R++ A ++ E D V ++T+I
Sbjct: 90 LVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLI 149
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G C G ++ A E M G + + +T LVNG C G V A+L+ + M GF+
Sbjct: 150 NGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKA---RVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
P T ++ +C + A+++L+ R +K Y +I GLC++G ++
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV----KYSIIIDGLCKDGSLDN 265
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
A + EM KGF+ + IY+ I G+ G + L ++M + ++
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 143/328 (43%), Gaps = 41/328 (12%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
++ +++S+G + T N LI + + G E++R++ + G+ D
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM------SLRGVVADTV---- 423
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
T+N L+ GF G E ++++ EM PD SY +L+ C+ +A
Sbjct: 424 ------TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++E++ +E D+ YN II G C ++ A + F + L GV+ T+ ++ G
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFE----------- 405
C+ G + A L++ M G P G T +LI G+ ++ E
Sbjct: 538 CKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDA 597
Query: 406 -----ALDILKARVVKFGLFPTEKSYMFLIKGLC--EEGKMEEALKVQAEMVGKGFEPSL 458
AL L AR++K G P ++ L++ C E + +A + M G++P++
Sbjct: 598 STLRFALSTL-ARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNV 656
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFE 486
Y+ I G + + + +MFE
Sbjct: 657 VTYNTVIKGLLNGNMISQVPGVLDQMFE 684
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 1/193 (0%)
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A L++EM ++ ++ + + + ++M L G+ + T ++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
N CR + A + + G+EP+ T LI LC + RV EAL+++ R+V+ G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD-RMVEMGH 173
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
PT + L+ GLC GK+ +A+ + MV GF+P+ Y + K G +A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 480 LRKEMFENQVRQE 492
L ++M E +++ +
Sbjct: 234 LLRKMEERKIKLD 246
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 273 MARLGCEPDCYSYSVLMAVFC--EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
M + G EPD ++++ L+ FC E + +A L++ M+ + +VV YNT+I G
Sbjct: 610 MLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNG 669
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+++ +M G + ++VT ++G C+ SAIL+ M
Sbjct: 670 NMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKM 717
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 115/282 (40%), Gaps = 53/282 (18%)
Query: 80 GLKNN--PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI-RVALRSPE 136
GL +N P AL F + KS + + Y IIH + A + A D+ + L+ +
Sbjct: 466 GLCDNGEPEKALEIFEKIE-KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524
Query: 137 NDPK--------------LKLFEVLVKTYRECGSAP--FVFDLLIKCCL-------EVKN 173
D K L ++L + E G +P +++LI+ L K
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL 584
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE-------IYREVFGLD 226
IE+I+ C G SV ST + ++R + +G+E F L+
Sbjct: 585 IEEIKRC----------GFSVDASTLRFALSTLARM--LKAGHEPDVFTFTTLLRPFCLE 632
Query: 227 SDATA----GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+A+ + K++K + +PNV T+N ++ G +V V +M GC+P+
Sbjct: 633 ENASVYDAPTLFKNMK-AMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNA 691
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ S ++ C++ A L +M + N DV I+
Sbjct: 692 VTKSTFISGLCKQDLHGSAILLLRKMENDN--EDVTTKKKIL 731
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 122/233 (52%), Gaps = 1/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+ L+ GF ++ E+ V EM+ G E + Y+VL+ C+ ++ +A +
Sbjct: 413 PNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDM 472
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM DK + D+ +NT+I G C++ A +R+M L GV +++VT+ L++ + R
Sbjct: 473 LGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLR 532
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A+ + NDM +G + T LI C +AL + V K L P+
Sbjct: 533 GGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRK-DLVPSNI 591
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
S LI GLC GK+ AL++ +M+ +G P + Y++ I+G K GN+ A
Sbjct: 592 SCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREA 644
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 160/358 (44%), Gaps = 41/358 (11%)
Query: 98 KSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY---REC 154
K+ C+ + ++ T+IH L + L+G A D++ + + P L + L+ + +
Sbjct: 373 KNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVN-DMSANGCTPNLITYTTLLDGFCKKNQL 431
Query: 155 GSAPFVFD----------------LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
A +V + LL C KN K+ +D++ + +G + T
Sbjct: 432 EEAGYVLNEMSAKGFELNIMGYNVLLRALC---KN-GKVPKALDMLGEMSDKGCKPDIFT 487
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
N LI+ + + +YR++ LD V N T+N L+ F
Sbjct: 488 FNTLIFGLCKVDRKEDALALYRDML-LDG---------------VIANTVTYNTLIHAFL 531
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
R GA ++ + +M GC D +Y+ L+ FC+ +A L++EM K++ +
Sbjct: 532 RGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNI 591
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+ N +I G C +G++ A E R+M G+ VT+ L+NG C+ G++ A ++N +
Sbjct: 592 SCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKL 651
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
+G +P+ T LI C + +F+ +L R V+ P + ++ L+ +E
Sbjct: 652 QAEGIQPDAITYNTLICWHC-RAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKE 708
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 181/439 (41%), Gaps = 39/439 (8%)
Query: 80 GLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDP 139
G N P A R + C+ + SY ++ IL A A +V L S P
Sbjct: 148 GRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEML-SKGVIP 206
Query: 140 KLKLFEVLVK------------------TYRECGSAPFVFDLLIKCCLEVKNIEKIETCV 181
+ F V++K T C V+ LI + +++ +
Sbjct: 207 TVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIH---ALSKRDRVNEAL 263
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSR-----------GKGVISGYEIYREVFGLDSDAT 230
++ + G V T N +I+ + R + + G+ +G+ +
Sbjct: 264 KLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGL 323
Query: 231 AGIGK-DVKRVVRVR---PNVHTFNALMVGFYREGAFEKVED-VWVEMARLGCEPDCYSY 285
+GK D +V+ + PN F L+ G+ + G ++ ++ +M + GC PD +++
Sbjct: 324 CRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTF 383
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ L+ C++ M A + +M +++ Y T++ GFC+ ++ A EM
Sbjct: 384 NTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSA 443
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G E + + + L+ C+ G V A+ + +M KG +P+ T LI LC R +
Sbjct: 444 KGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKED 503
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
AL + + ++ G+ +Y LI G ++EALK+ +M+ +G Y+ I
Sbjct: 504 ALALYRDMLLD-GVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLI 562
Query: 466 DGYMKEGNVEMATMLRKEM 484
+ K G E A L EM
Sbjct: 563 KAFCKLGATEKALGLFDEM 581
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 130/247 (52%), Gaps = 1/247 (0%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T+N L+ + +G + ++ EM G D ++Y++L+ C+E +++A +++E
Sbjct: 292 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFE 351
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M + V VV Y ++I + G++ ++ F E G+ V + L+N + +G
Sbjct: 352 NMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 411
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++D A + +M +K P+ T L+ LC RV EA ++ + K G+ P +Y
Sbjct: 412 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID-EMTKRGIQPDLVTY 470
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI G +G +++AL+++ EM+ KGF P+L Y+A I G K G + A + KEM E
Sbjct: 471 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 530
Query: 487 NQVRQED 493
N + +D
Sbjct: 531 NGITPDD 537
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 146/297 (49%), Gaps = 19/297 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEV-SRGKGVISGYEIYREVFGLDSDATAGIG 234
K++T + ++ RG+++ V+T N L+ + G+G YE+ E+ G G+
Sbjct: 272 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT-EAYELVEEMGG------KGLA 324
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
DV T+N L+ G +EG +K +++ M+R G +Y+ L+ +
Sbjct: 325 LDV----------FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSK 374
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ +++E +KL++E + + D+V YN +I G + RA E EM + VT
Sbjct: 375 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 434
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ G C G VD A + ++M ++G +P+ T LI K V +AL I + +
Sbjct: 435 YNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRI-RNEM 493
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ G PT +Y LI+GLC+ G+ ++A + EMV G P Y + I+G E
Sbjct: 494 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 550
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 138/315 (43%), Gaps = 73/315 (23%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEM-ARLGCEPDCYSYSVLMAVFCEERRMREAE 302
RPN T+N ++ GF G + D+ EM R G P+ Y+Y +++ +C+ R+ EA
Sbjct: 182 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 241
Query: 303 KLWEEMRDKN-VEHDVVAYNTIIGGFCEIGEM---------------------------- 333
K+++EM K V+ + V YN +IGG+C+ G++
Sbjct: 242 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 301
Query: 334 -------ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
A E EMG G+ T+ L+NG+C+ G+V A+ ++ +M R+G
Sbjct: 302 LFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 361
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFG---------------------------- 418
T LI L K +V E D L V+ G
Sbjct: 362 VVTYTSLIYALSKKGQVQET-DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 420
Query: 419 -------LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ P + +Y L++GLC G+++EA K+ EM +G +P L Y+ I GY +
Sbjct: 421 GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMK 480
Query: 472 GNVEMATMLRKEMFE 486
G+V+ A +R EM
Sbjct: 481 GDVKDALRIRNEMMN 495
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 120/225 (53%), Gaps = 11/225 (4%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
++ +M RL ++++++ C + A +L +M N V YNT+I GFC
Sbjct: 141 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNA----VTYNTVIAGFC 196
Query: 329 EIGEMARAEEFFREMG-LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG-FEPE 386
G + A + REM G+ + T+ +++G+C+ G VD A+ V+++M KG +PE
Sbjct: 197 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 256
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
LIG CD+ ++ AL + + R+V+ G+ T +Y L+ L +G+ EA ++
Sbjct: 257 AVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 315
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
EM GKG + Y+ I+G+ KEGNV+ A E+FEN R+
Sbjct: 316 EEMGGKGLALDVFTYNILINGHCKEGNVKKAL----EIFENMSRR 356
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P++ T+N L+ G+ +G + + EM G P +Y+ L+ C+ + +AE
Sbjct: 463 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 522
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+ +EM + + D Y ++I G E A +E
Sbjct: 523 NMVKEMVENGITPDDSTYISLIEGLTTEDERAIDDE 558
>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/482 (24%), Positives = 211/482 (43%), Gaps = 55/482 (11%)
Query: 38 SHN-LIATVVSLLTHHRSKSRWNHLLSLCR-SGLTPTQFSQIALGLKNNPH---LALRFF 92
SHN + +V S++ K W +LL + S LT + ++ L L + + FF
Sbjct: 6 SHNQFVDSVCSIVV----KGHWGNLLKVKNASALTSSTIHKVLLQLSLYGYGLSHSFPFF 61
Query: 93 SFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI-RVALRSPENDPKLKLFEVLVKTY 151
+ HSL +IHIL+ + A+ V+ ++A + + P + LV+T+
Sbjct: 62 KWLDSIPHYSHSLQCSWAMIHILTEHKHFKTAQHVLEKIAHKDFLSSPSV--LSTLVRTH 119
Query: 152 RECGSAPFVFDLLI----KCCLEVKNIEKIE------------TCVDIVRMLMSRGLSVK 195
V L+ K + I+ E C ++ L+ G++
Sbjct: 120 DNQEVNSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVT-- 177
Query: 196 VSTCNALIWEVSRGK---GVISGYEIYREVFGLDSDATAGIGKDVKR---------VVRV 243
++W++ + GV+ IY +F S + DV+R V V
Sbjct: 178 -----HMVWKIYKRMVQVGVVPNIYIYNCLFHACSKSG-----DVERAEQLLNEMDVKGV 227
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
++ T+N L+ + ++G + + M R G D SY+ L+ FC+E RMREA +
Sbjct: 228 LQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMR 287
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ E+++ H V Y T+I G+C+ E+ A + + M G+ VT+ ++ C
Sbjct: 288 MFSEIKNATPNH--VTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLC 345
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G + A + N+M + + + T LI C + AL K ++++ GL P
Sbjct: 346 QDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALK-FKNKMLEAGLKPDP 404
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI G C+ ++E A ++ M+ GF PS YS +DGY K+ N++ L E
Sbjct: 405 FTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDE 464
Query: 484 MF 485
Sbjct: 465 FL 466
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 120/248 (48%), Gaps = 3/248 (1%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
R+ V+P++H L+ ++G V ++ M ++G P+ Y Y+ L + +
Sbjct: 153 RLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIYNCLFHACSKSGDV 212
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
AE+L EM K V D+ YNT++ +C+ G A M G+ V++ L
Sbjct: 213 ERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINLDIVSYNSL 272
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+ G+C+ G + A+ +++++ K P T LI C + EAL + K K G
Sbjct: 273 IYGFCKEGRMREAMRMFSEI--KNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAK-G 329
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
L+P +Y +++ LC++G++ +A K+ EM + + + I+ Y K G+++ A
Sbjct: 330 LYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSAL 389
Query: 479 MLRKEMFE 486
+ +M E
Sbjct: 390 KFKNKMLE 397
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 121/240 (50%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+ L+ G+ + E+ + M G P +Y+ ++ C++ R+R+A KL
Sbjct: 297 PNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKL 356
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM ++ ++ D + NT+I +C+IG++ A +F +M +G++ T++ L++G+C+
Sbjct: 357 LNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCK 416
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+++SA + M GF P T ++ +K+ +A+ L + G+
Sbjct: 417 TNELESAKELMFSMLDAGFTPSYCTYSWIVDGY-NKKDNMDAVLALPDEFLSRGICLDVS 475
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI+ C+ +++ A ++ M GKG IY++ Y GNV A+ + +EM
Sbjct: 476 VYRALIRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIAYAYWNVGNVSAASSMLEEM 535
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 116/248 (46%), Gaps = 3/248 (1%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N + L++ + + + V+ +M +P ++ +VL+ ++ K++
Sbjct: 125 NSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIY 184
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M V ++ YN + + G++ RAE+ EM + GV T+ L++ YC+
Sbjct: 185 KRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKK 244
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G A+ + N M R+G + + LI C + R+ EA+ + +K P +
Sbjct: 245 GMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSE--IK-NATPNHVT 301
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI G C+ ++EEALK+ M KG P + Y++ + ++G + A L EM
Sbjct: 302 YTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMS 361
Query: 486 ENQVRQED 493
E +++ ++
Sbjct: 362 ERKLQADN 369
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ T+ AL+ GF + E +++ M G P +YS ++ + ++ M
Sbjct: 400 LKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVL 459
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +E + + DV Y +I C++ + AE F M G+ SV + + Y
Sbjct: 460 ALPDEFLSRGICLDVSVYRALIRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIAYAY 519
Query: 363 CRAGDVDSAILVYNDMCRK 381
G+V +A + +M R+
Sbjct: 520 WNVGNVSAASSMLEEMARR 538
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 145/324 (44%), Gaps = 60/324 (18%)
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
C LI E + VI YR S GI D K T+ LM G +
Sbjct: 560 CTGLINEYCKKGKVIEACSAYR------SMVDQGILGDAK----------TYTVLMNGLF 603
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ + E+++ EM G PD +SY VL+ F + M++A +++EM ++ + +V+
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
YN ++GGFC GE+ +A+E EM + G+ ++VT+ +++GYC++GD+ A ++++M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR-----------------VVKFGLF- 420
KG P+ L+ C V A+ I V KFG
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 421 -------------------PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
P + +Y +I LC+EG +E A ++ +M P++ Y
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 462 SAFIDGYMKEGNVEMATMLRKEMF 485
++ ++GY K G R EMF
Sbjct: 844 TSLLNGYDKMGR-------RAEMF 860
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 158/330 (47%), Gaps = 22/330 (6%)
Query: 158 PFVFDLLIKCCLEVKNIEKI-ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGY 216
P+++D CC+ V + E + E + +++ GL + +LI R K V GY
Sbjct: 347 PYMYD----CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGY 402
Query: 217 EIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
E+ E+ KR + + P +T+ ++ G G + ++ EM
Sbjct: 403 ELLVEM--------------KKRNIVISP--YTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
GC P+ Y+ L+ F + R +A ++ +EM+++ + D+ YN++I G + M A
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
F EM +G++ ++ T+ ++GY A + SA +M G P LI E
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
C K +V EA ++ V + G+ K+Y L+ GL + K+++A ++ EM GKG P
Sbjct: 567 YCKKGKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ Y I+G+ K GN++ A+ + EM E
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 162/379 (42%), Gaps = 62/379 (16%)
Query: 148 VKTYRECGSAP---FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
VK RECG P L+ + C K + IE C R ++ +G+ T L+
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYC---KKGKVIEAC-SAYRSMVDQGILGDAKTYTVLMN 600
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ + V EI+RE+ G GI P+V ++ L+ GF + G +
Sbjct: 601 GLFKNDKVDDAEEIFREMRG------KGIA----------PDVFSYGVLINGFSKLGNMQ 644
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
K ++ EM G P+ Y++L+ FC + +A++L +EM K + + V Y TII
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY--------- 375
G+C+ G++A A F EM L G+ S + LV+G CR DV+ AI ++
Sbjct: 705 DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS 764
Query: 376 -------------------------NDMCRKGFE----PEGSTIEVLIGELCDKRRVFEA 406
N + F+ P T ++I LC K EA
Sbjct: 765 STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC-KEGNLEA 823
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L ++ L PT +Y L+ G + G+ E V E + G EP +YS I+
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883
Query: 467 GYMKEGNVEMATMLRKEMF 485
++KEG A +L +MF
Sbjct: 884 AFLKEGMTTKALVLVDQMF 902
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 170/392 (43%), Gaps = 44/392 (11%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY--------------- 151
+Y T++ + + + A ++++ + S P + ++ L+KT+
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCR-PNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 152 -RECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+E G AP F ++ LI + + ++++ + ++ GL T A I
Sbjct: 478 MKEQGIAPDIFCYNSLI---IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI----- 529
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVK--RVVRVRPNVHTFNALMVGFYREGAFEKV 266
SGY +++ A K VK R V PN L+ + ++G +
Sbjct: 530 -----SGY--------IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ M G D +Y+VLM + ++ +AE+++ EMR K + DV +Y +I G
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
F ++G M +A F EM G+ + + + L+ G+CR+G+++ A + ++M KG P
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T +I C + EA + +K GL P Y L+ G C +E A+ +
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLK-GLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
KG S ++A I+ K G E+ T
Sbjct: 756 GTN-KKGCASSTAPFNALINWVFKFGKTELKT 786
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 1/239 (0%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
HT++ L+ G + + + + EM G Y Y + V +E M +A+ L++
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M + AY ++I G+C + + E EM + S T+ +V G C +GD
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+D A + +M G P LI R +A+ +LK + + G+ P Y
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK-EMKEQGIAPDIFCYN 491
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI GL + +M+EA EMV G +P+ Y AFI GY++ A KEM E
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 75/148 (50%), Gaps = 6/148 (4%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMA-----RLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
FNAL+ ++ G E +V + R G +P+ +Y++++ C+E + A++L
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKEL 827
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M++ N+ V+ Y +++ G+ ++G A F E +G+E + + ++N + +
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEV 392
G A+++ + M K +G + +
Sbjct: 888 EGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 32/233 (13%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI-WEVSRGKGVISGYE 217
FV+ L+ C + ++E+ T + +G + + NALI W GK +
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGTNK----KGCASSTAPFNALINWVFKFGKTELKTEV 788
Query: 218 IYR------EVFGLDSDATAGIGKDV----------------KRVVRVRPNVHTFNALMV 255
+ R + FG +D T I D + + P V T+ +L+
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G+ + G ++ V+ E G EPD YSV++ F +E +A L ++M KN
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
Query: 316 D-----VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
D + ++ GF ++GEM AE+ M S T L+N C
Sbjct: 909 DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 124/249 (49%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEERRMREAEK 303
P+ T N L+ G R + D+ + R G C P+ +Y+ +++ +C+ RM +A
Sbjct: 251 PDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALS 310
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ +M + + V YN +I G+ + +M A +R++ L VTF L++GYC
Sbjct: 311 VYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYC 370
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G +D A+ ++ +M + +P T ++I LC + R EAL L+ ++ + P
Sbjct: 371 RCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQT 430
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
Y +I LC+ G++EEA + +M KG P Y+ I G+ +G + A L +
Sbjct: 431 FIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHK 490
Query: 484 MFENQVRQE 492
M E R +
Sbjct: 491 MVETGCRPD 499
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 199/452 (44%), Gaps = 45/452 (9%)
Query: 27 STSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPH 86
S S PPS+QS++ + T++ HR + ++ +SG P
Sbjct: 102 SPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTD-QSGYLPDAV------------ 148
Query: 87 LALRFFSFTQHKSLCKHSLSSYATIIHILSR-ARLIGPA--RDVIRVALRSPENDPKLKL 143
FFSF L + T++ S+ R I P +++ + + + L
Sbjct: 149 ----FFSFVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVAL 204
Query: 144 FEVLVKT--YRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
FE ++ Y G + F+++IK V N +K +++V + G S T N
Sbjct: 205 FESWIQDGLYSPDG---WSFNVVIKGVCRVGNFQK---ALELVERMTEFGCSPDTITHNI 258
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
L+ + R K V G+++ R + +R PNV T+ +++ G+ + G
Sbjct: 259 LVDGLCRAKQVNRGHDLLRRL---------------QRDGVCMPNVVTYTSVISGYCKAG 303
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
E V+ +M G P+ +Y+VL+ + + M A +++ ++ + DVV ++
Sbjct: 304 RMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFS 363
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM-CR 380
++I G+C G++ A ++EMG ++ + TF +++ C+ A+ ++ R
Sbjct: 364 SLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMR 423
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
P+ +I LC +V EA +++ + + G P + +Y LI G C +G++
Sbjct: 424 ADIAPQTFIYNPVIDILCKGGQVEEA-NLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIP 482
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
EA+ + +MV G P ++FI +K G
Sbjct: 483 EAITLFHKMVETGCRPDKITVNSFISCVLKAG 514
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 109/250 (43%), Gaps = 43/250 (17%)
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC------- 328
L P SYS ++ + C R R+A KL+++M D++ + + + G C
Sbjct: 105 LSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLD 164
Query: 329 -EIGEMARAEEFFREM-------------------------------GLSGVESSSVTFE 356
+ + +A +F R + GL + S F
Sbjct: 165 AAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWS--FN 222
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
++ G CR G+ A+ + M G P+ T +L+ LC ++V D+L+ R+ +
Sbjct: 223 VVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLR-RLQR 281
Query: 417 FGL-FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G+ P +Y +I G C+ G+ME+AL V +M+ G P+ Y+ I+GY K ++E
Sbjct: 282 DGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDME 341
Query: 476 MATMLRKEMF 485
A + +++
Sbjct: 342 SAVRMYRQLI 351
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 140/270 (51%), Gaps = 16/270 (5%)
Query: 231 AGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+G D R++R + PNV TF A++ F +EG F + ++ EM R +PD ++
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+ L+ C R+ EA+++ + M K DVV YNT+I GFC+ + + FREM
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G+ ++T+ ++ GY +AG D+A +++ R P T +L+ LC RV
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVE 398
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+AL +L + K + +Y +I G+C+ G +E+A + + KG +P + Y+
Sbjct: 399 KAL-VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 465 IDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
I G+ ++ + + +L ++M QEDG
Sbjct: 458 ISGFCRKRQWDKSDLLYRKM------QEDG 481
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 118/239 (49%), Gaps = 1/239 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+++++N ++ R F V +M + G EPD + S L+ FC+ R+ +A L
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M + DVV YNTII G C+IG + A E F M GV + +VT+ LV G C +
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G A + DM + P T +I + + EA+ L + + + P +
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK-LYEEMTRRCVDPDVFT 281
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI GLC G+++EA ++ MV KG P + Y+ I+G+ K V+ T L +EM
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 113/233 (48%), Gaps = 1/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T ++L+ GF + D+ +M +G PD Y+ ++ C+ + +A +L
Sbjct: 137 PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVEL 196
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ M V D V YN+++ G C G + A R+M + + + +TF +++ + +
Sbjct: 197 FDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK 256
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G A+ +Y +M R+ +P+ T LI LC RV EA +L V K G P
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK-GCLPDVV 315
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI G C+ +++E K+ EM +G Y+ I GY + G + A
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 127/260 (48%), Gaps = 26/260 (10%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVR 185
VI V ++ + +KL+E + T R F ++ LI C+ +++ ++
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEM--TRRCVDPDVFTYNSLINGLCMH----GRVDEAKQMLD 303
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
+++++G V T N LI + K V G +++RE+ A G+ D
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM------AQRGLVGDT-------- 349
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
T+N ++ G+++ G + ++++ +R+ P+ +YS+L+ C R+ +A L+
Sbjct: 350 --ITYNTIIQGYFQAGRPDAAQEIF---SRMDSRPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E M+ +E D+ YN +I G C+IG + A + FR + G++ V++ +++G+CR
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Query: 366 GDVDSAILVYNDMCRKGFEP 385
D + L+Y M G P
Sbjct: 465 RQWDKSDLLYRKMQEDGLLP 484
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 114/239 (47%), Gaps = 1/239 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P++ F+ ++ + ++ V ++ M G D YSY++++ C R A
Sbjct: 64 RPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIA 123
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ +M E DVV +++I GFC+ + A + +M G V + +++G
Sbjct: 124 LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 183
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G V+ A+ +++ M R G + T L+ LC R +A +++ V++ + P
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVP 242
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
++ +I +EGK EA+K+ EM + +P + Y++ I+G G V+ A +
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 1/217 (0%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
D++ +M + P +S +++ + + L+ M + HD+ +YN +I
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C A +M G E VT L+NG+C+ V AI + + M GF P+
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+I C V +A+++ R+ + G+ +Y L+ GLC G+ +A ++
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFD-RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+MV + P++ ++A ID ++KEG A L +EM
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+ F +M S S V F +++ ++ + D I +++ M G + + ++I L
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C R AL ++ +++KFG P + LI G C+ ++ +A+ + ++M GF P
Sbjct: 115 CRCSRFVIALSVV-GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ IY+ IDG K G V A L M + VR +
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 145/324 (44%), Gaps = 60/324 (18%)
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
C LI E + VI YR S GI D K T+ LM G +
Sbjct: 560 CTGLINEYCKKGKVIEACSAYR------SMVDQGILGDAK----------TYTVLMNGLF 603
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ + E+++ EM G PD +SY VL+ F + M++A +++EM ++ + +V+
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
YN ++GGFC GE+ +A+E EM + G+ ++VT+ +++GYC++GD+ A ++++M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR-----------------VVKFGLF- 420
KG P+ L+ C V A+ I V KFG
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 421 -------------------PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
P + +Y +I LC+EG +E A ++ +M P++ Y
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 462 SAFIDGYMKEGNVEMATMLRKEMF 485
++ ++GY K G R EMF
Sbjct: 844 TSLLNGYDKMGR-------RAEMF 860
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 158/330 (47%), Gaps = 22/330 (6%)
Query: 158 PFVFDLLIKCCLEVKNIEKI-ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGY 216
P+++D CC+ V + E + E + +++ GL + +LI R K V GY
Sbjct: 347 PYMYD----CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGY 402
Query: 217 EIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
E+ E+ KR + + P +T+ ++ G G + ++ EM
Sbjct: 403 ELLVEM--------------KKRNIVISP--YTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
GC P+ Y+ L+ F + R +A ++ +EM+++ + D+ YN++I G + M A
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
F EM +G++ ++ T+ ++GY A + SA +M G P LI E
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
C K +V EA ++ V + G+ K+Y L+ GL + K+++A ++ EM GKG P
Sbjct: 567 YCKKGKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ Y I+G+ K GN++ A+ + EM E
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 162/379 (42%), Gaps = 62/379 (16%)
Query: 148 VKTYRECGSAP---FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
VK RECG P L+ + C K + IE C R ++ +G+ T L+
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYC---KKGKVIEAC-SAYRSMVDQGILGDAKTYTVLMN 600
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ + V EI+RE+ G GI P+V ++ L+ GF + G +
Sbjct: 601 GLFKNDKVDDAEEIFREMRG------KGIA----------PDVFSYGVLINGFSKLGNMQ 644
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
K ++ EM G P+ Y++L+ FC + +A++L +EM K + + V Y TII
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY--------- 375
G+C+ G++A A F EM L G+ S + LV+G CR DV+ AI ++
Sbjct: 705 DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS 764
Query: 376 -------------------------NDMCRKGFE----PEGSTIEVLIGELCDKRRVFEA 406
N + F+ P T ++I LC K EA
Sbjct: 765 STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC-KEGNLEA 823
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L ++ L PT +Y L+ G + G+ E V E + G EP +YS I+
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883
Query: 467 GYMKEGNVEMATMLRKEMF 485
++KEG A +L +MF
Sbjct: 884 AFLKEGMTTKALVLVDQMF 902
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 170/392 (43%), Gaps = 44/392 (11%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY--------------- 151
+Y T++ + + + A ++++ + S P + ++ L+KT+
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCR-PNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 152 -RECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+E G AP F ++ LI + + ++++ + ++ GL T A I
Sbjct: 478 MKEQGIAPDIFCYNSLI---IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI----- 529
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVK--RVVRVRPNVHTFNALMVGFYREGAFEKV 266
SGY +++ A K VK R V PN L+ + ++G +
Sbjct: 530 -----SGY--------IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ M G D +Y+VLM + ++ +AE+++ EMR K + DV +Y +I G
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
F ++G M +A F EM G+ + + + L+ G+CR+G+++ A + ++M KG P
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T +I C + EA + +K GL P Y L+ G C +E A+ +
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLK-GLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
KG S ++A I+ K G E+ T
Sbjct: 756 GTN-KKGCASSTAPFNALINWVFKFGKTELKT 786
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 1/239 (0%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
HT++ L+ G + + + + EM G Y Y + V +E M +A+ L++
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M + AY ++I G+C + + E EM + S T+ +V G C +GD
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+D A + +M G P LI R +A+ +LK + + G+ P Y
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK-EMKEQGIAPDIFCYN 491
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI GL + +M+EA EMV G +P+ Y AFI GY++ A KEM E
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 75/148 (50%), Gaps = 6/148 (4%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMA-----RLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
FNAL+ ++ G E +V + R G +P+ +Y++++ C+E + A++L
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKEL 827
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M++ N+ V+ Y +++ G+ ++G A F E +G+E + + ++N + +
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEV 392
G A+++ + M K +G + +
Sbjct: 888 EGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 32/233 (13%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI-WEVSRGKGVISGYE 217
FV+ L+ C + ++E+ T + +G + + NALI W GK +
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGTNK----KGCASSTAPFNALINWVFKFGKTELKTEV 788
Query: 218 IYR------EVFGLDSDATAGIGKDV----------------KRVVRVRPNVHTFNALMV 255
+ R + FG +D T I D + + P V T+ +L+
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G+ + G ++ V+ E G EPD YSV++ F +E +A L ++M KN
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
Query: 316 D-----VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
D + ++ GF ++GEM AE+ M S T L+N C
Sbjct: 909 DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 187/414 (45%), Gaps = 37/414 (8%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI---RVALRSPENDPKLKLF 144
A+R F + + L + + Y+ +IH L +AR + A +++ + A +P+ L
Sbjct: 145 AVRIFKSMEARGLAPNEVV-YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLI 203
Query: 145 EVLVKT------------YRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSR 190
+ L K+ E G P + +++LI + N + + +
Sbjct: 204 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASH--SLAQETTIN 261
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTF 250
G ++ + T A++ +++ K + E L TA P + T+
Sbjct: 262 GCTIDIHTYTAIVDWLAKNKKI-------EEAVALMEKITAN---------GCTPTIATY 305
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
NAL+ G + G E+ D+ ++ GC PD +Y+ L+ +E+R EA KL++EM
Sbjct: 306 NALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAL 365
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
+ + D V Y +I + G++ +A ++ M G VT +++G +AG + +
Sbjct: 366 RGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGA 425
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A+ ++ M +G P LI LC R++ AL++L A++ K P +Y LI
Sbjct: 426 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML-AQMKKAFCTPDTITYNILI 484
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
GLC+ G +E A EM+ G +P + Y+ I G+ K GN + A + +M
Sbjct: 485 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDM 538
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 121/234 (51%), Gaps = 1/234 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + T+NAL+ G + G E+ D+ ++ GC PD +Y+ L+ +E+R EA KL
Sbjct: 19 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 78
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++EM + + D V Y +I + G++ +A ++ M G VT +++G +
Sbjct: 79 FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 138
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG + +A+ ++ M +G P LI LC R++ AL++L A++ K P
Sbjct: 139 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML-AQMKKAFCTPDTI 197
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+Y LI GLC+ G +E A EM+ G +P + Y+ I G+ K GN + A+
Sbjct: 198 TYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAS 251
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 160/329 (48%), Gaps = 21/329 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV----FGLDSDATA 231
++E +D++R ++ G + V T +LI + + K Y++++E+ LD+
Sbjct: 36 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYT 95
Query: 232 GIGKDVKRVVRVR---------------PNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+ +++ + ++ P+V T + ++ G + G ++ M
Sbjct: 96 ALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR 155
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G P+ YS L+ C+ R+M A ++ +M+ D + YN +I G C+ G++ A
Sbjct: 156 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAA 215
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI-LVYNDMCRKGFEPEGSTIEVLIG 395
FF EM +G + T+ L++G+C+AG+ D+A + + G + T ++
Sbjct: 216 RAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVD 275
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
L +++ EA+ +++ ++ G PT +Y L+ GLC+ G++EEA+ + ++V G
Sbjct: 276 WLAKNKKIEEAVALME-KITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 334
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P + Y++ IDG KE A L KEM
Sbjct: 335 PDVVTYTSLIDGLGKEKRSFEAYKLFKEM 363
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 1/247 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++HT+ A++ + E+ + ++ GC P +Y+ L+ C+ R+ EA L
Sbjct: 266 DIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 325
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++ D DVV Y ++I G + A + F+EM L G+ +V + L+ +
Sbjct: 326 RKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQT 385
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + A VY M G P+ T+ +I L R+ A+ I K+ + GL P E
Sbjct: 386 GKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR-GLAPNEVV 444
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI GLC+ KM+ AL++ A+M P Y+ IDG K G+VE A EM
Sbjct: 445 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML 504
Query: 486 ENQVRQE 492
E + +
Sbjct: 505 EAGCKPD 511
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 4/231 (1%)
Query: 265 KVEDVWVEMARL---GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
K+E+ M ++ GC P +Y+ L+ C+ R+ EA L ++ D DVV Y
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
++I G + A + F+EM L G+ +V + L+ + G + A VY M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G P+ T+ +I L R+ A+ I K+ + GL P E Y LI GLC+ KM+
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR-GLAPNEVVYSALIHGLCKARKMDC 179
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
AL++ A+M P Y+ IDG K G+VE A EM E + +
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPD 230
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 119/250 (47%), Gaps = 19/250 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV----FGLDSDATA 231
++E +D++R ++ G + V T +LI + + K Y++++E+ LD+
Sbjct: 317 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYT 376
Query: 232 GIGKDVKRVVRVR---------------PNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+ +++ + ++ P+V T + ++ G + G ++ M
Sbjct: 377 ALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR 436
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G P+ YS L+ C+ R+M A ++ +M+ D + YN +I G C+ G++ A
Sbjct: 437 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAA 496
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
FF EM +G + T+ L++G+C+AG+ D+A V++DM T LI
Sbjct: 497 RAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISG 556
Query: 397 LCDKRRVFEA 406
LC +R++ +A
Sbjct: 557 LCKRRQLTKA 566
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG-------------LDSDATAG-IGK 235
RGL++ ALI E+ + + +Y+ + +D + AG IG
Sbjct: 366 RGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGA 425
Query: 236 DVK--RVVRVR---PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
V+ + + R PN ++AL+ G + + ++ +M + C PD +Y++L+
Sbjct: 426 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID 485
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C+ + A ++EM + + DV YN +I GFC+ G A F +M S +
Sbjct: 486 GLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSA 545
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+ VT+ L++G C+ + A L + M +G
Sbjct: 546 NVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 126/238 (52%), Gaps = 1/238 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RP+V T+N+L+ + G + + +M R+G PD ++S ++ VF +E ++ EA+
Sbjct: 209 IRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAK 268
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K ++EM ++V+ ++V YN++I G C G + A++ M G ++VT+ LVNGY
Sbjct: 269 KQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGY 328
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++ VD A+ + M G + + T L C + F A + + AR+V G+ P
Sbjct: 329 CKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQ-FNAAEKVLARMVSCGVLPD 387
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
++ L+ GLCE GK+E+AL ++ + Y+ I G K VE A L
Sbjct: 388 IYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYL 445
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 1/227 (0%)
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
F ++ +MA P +S L+ + ++ L+ + + HD+ +++T
Sbjct: 54 FNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFST 113
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I FC ++ A +M G E S VTF LVNG+C + A+ + + + G
Sbjct: 114 LIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLG 173
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+EP +I LC+ R+V ALD+L + K G+ P +Y LI L GK +
Sbjct: 174 YEPNVVIYNTIIDSLCENRQVDTALDVLN-HMEKMGIRPDVITYNSLITRLFHSGKWGVS 232
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ ++M+ G P + +SA ID + KEG + A EM + V
Sbjct: 233 ARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSV 279
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 6/253 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P++ F+ L+V + +E V ++ + LG D YS+S L+ FC R+ A
Sbjct: 68 RPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLA 127
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+M E +V + +++ GFC + + A ++ G E + V + +++
Sbjct: 128 LSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDS 187
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C VD+A+ V N M + G P+ T LI L + + IL + +++ G+ P
Sbjct: 188 LCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARIL-SDMMRMGIHP 246
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT--- 478
++ +I +EG++ EA K EM+ + +P++ Y++ I+G G ++ A
Sbjct: 247 DVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVL 306
Query: 479 --MLRKEMFENQV 489
M+ K F N V
Sbjct: 307 NFMVSKGFFPNAV 319
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 82/177 (46%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N L+ G+ + + + M+ G + D ++Y+ L +C+ + AEK+
Sbjct: 316 PNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKV 375
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M V D+ +N ++ G CE G++ +A ++ S +T+ ++ G C+
Sbjct: 376 LARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCK 435
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
A V+ A ++ + KG P+ T ++ L KR EA ++ + GL P
Sbjct: 436 ANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGLMP 492
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 1/188 (0%)
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ +A L+ +M + +V ++ ++ ++ + FR + + G+ +F
Sbjct: 53 KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L++ +CR + A+ M + GFEP T L+ C R+ EA+ ++ ++V
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVD-QIVG 171
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G P Y +I LCE +++ AL V M G P + Y++ I G +
Sbjct: 172 LGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGV 231
Query: 477 ATMLRKEM 484
+ + +M
Sbjct: 232 SARILSDM 239
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 177/409 (43%), Gaps = 64/409 (15%)
Query: 141 LKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
L+LF+ LV G P +++ +++KC E+K+ K + +I+ G S+ + T
Sbjct: 210 LELFDTLVNA----GVKPDCYIYTVVVKCLCELKDFNKAK---EIINQAEGNGCSLSIVT 262
Query: 199 CNALIWEVSRGKGVISGYEIYREVF--GLDSD---------------------------- 228
N I + + K V E+ R + GL +D
Sbjct: 263 YNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMI 322
Query: 229 ---------ATAGIGKDVKRV---------------VRVRPNVHTFNALMVGFYREGAFE 264
A +G+ + + ++ + V PN+ +N+++ + G E
Sbjct: 323 ELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLE 382
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ E ++ MA G P+ +Y++L+ F ++ A + +M + + V +YN++I
Sbjct: 383 EAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMI 442
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
C+ G+M AE F+EM G++ + T+ L++GYC+ G V A +Y++M KG
Sbjct: 443 NCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIA 502
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P T LI LC ++ EA + +V+ + P E +Y LI+G C EG A +
Sbjct: 503 PNTVTFTALICGLCQINKMAEASKLFD-EMVELKILPNEVTYNVLIEGHCREGNTTRAFE 561
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+ EM+ KG P Y I G G V A ++ R ++
Sbjct: 562 LLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDE 610
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 129/240 (53%), Gaps = 1/240 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ V+++N+++ + G + E ++ EM G +P +Y+ L++ +C++ + +A
Sbjct: 431 ISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAF 490
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL+ EM K + + V + +I G C+I +MA A + F EM + + VT+ L+ G+
Sbjct: 491 KLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGH 550
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G+ A + ++M +KG P+ T LI LC RV EA + + K
Sbjct: 551 CREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLD- 609
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E Y L++G C+EG+++EAL + EMVG+G + L Y+ I G + + + + +LR+
Sbjct: 610 ELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLRE 669
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 205/453 (45%), Gaps = 60/453 (13%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI 128
+ P ++ + ++ LALRFF+F HS +S+ +IH L + L PA ++
Sbjct: 67 IEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPASSLL 126
Query: 129 RVALRSPENDPKLKLFEVLVKTYRECG-SAPFVFDLLIKCCLEVKNIEKIETCVDIVRML 187
+ L N ++FE ++Y++ S+ FD+LI+ ++ K ++ V +V ++
Sbjct: 127 QTLLLRGLNPH--QIFENFFESYKKYKFSSSSGFDMLIQHYVQNK---RVMDGVLVVNLM 181
Query: 188 MSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGL-DSDATAGIGKDVKRVVRVRPN 246
GL +V T +AL+ ++R + +R+V L D+ AG V+P+
Sbjct: 182 RDYGLLPEVRTLSALLNALARIRK-------FRQVLELFDTLVNAG----------VKPD 224
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ + ++ F K +++ + GC +Y+V + C+ +R+ EA ++
Sbjct: 225 CYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKR 284
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEI-----------------------------------G 331
+ +K ++ D+V Y T++ G C I G
Sbjct: 285 SLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMG 344
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A E ++G GV + + ++N C+ G ++ A L+++ M +G P T
Sbjct: 345 SIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYT 404
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+LI + ++ A ++++ G+ T SY +I C+ GKM+ A + EMV
Sbjct: 405 ILIDGFGRRAKLDVAFYYFN-KMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVD 463
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
KG +P++ Y++ I GY K+G V A L EM
Sbjct: 464 KGLKPTVATYTSLISGYCKDGLVPKAFKLYHEM 496
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 113/485 (23%), Positives = 189/485 (38%), Gaps = 95/485 (19%)
Query: 98 KSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECG-- 155
SLCK A ++ + R + P + + KL + ECG
Sbjct: 373 NSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGIS 432
Query: 156 SAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISG 215
+ + ++ +I C + ++ E + + ++ +GL V+T +LI + V
Sbjct: 433 ATVYSYNSMINCQCKFGKMKMAEL---LFKEMVDKGLKPTVATYTSLISGYCKDGLVPKA 489
Query: 216 YEIYREVFG-------------------LDSDATAGIGKDVKRVVRVRPNVHTFNALMVG 256
+++Y E+ G ++ A A D +++ PN T+N L+ G
Sbjct: 490 FKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEG 549
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSY------------------------------- 285
REG + ++ EM + G PD Y+Y
Sbjct: 550 HCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLD 609
Query: 286 ----SVLMAVFCEERRMREAE----------------------------------KLWEE 307
+ L+ FC+E R++EA +L E
Sbjct: 610 ELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLRE 669
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M K ++ D V Y +I GF + G + +A EF+ M G +SVT+ LVNG +AG
Sbjct: 670 MHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGY 729
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
V+ A L++ M P T + L + + AL + A + G F +Y
Sbjct: 730 VNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ--GSFANTVTYN 787
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
LI+G C+ GK +EA K+ M+G G P YS FI Y K GNV+ A + + M +
Sbjct: 788 ILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQR 847
Query: 488 QVRQE 492
++ +
Sbjct: 848 GLKPD 852
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 107/223 (47%), Gaps = 2/223 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ + L+ GF + G +K + W M G P+ +Y+ L+ + + EA+
Sbjct: 675 MQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAK 734
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++ M + + Y + + G M A + M L G +++VT+ L+ GY
Sbjct: 735 LLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAM-LQGSFANTVTYNILIRGY 793
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G A + + M G P+ T I E C + V A+D+ + +++ GL P
Sbjct: 794 CQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWEC-MLQRGLKPD 852
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+ FLI C G+++ AL+++ +M+ +G +P+ Y + +
Sbjct: 853 RVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLM 895
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 1/221 (0%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M G P+ + S L+ R+ R+ +L++ + + V+ D Y ++ CE+ +
Sbjct: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKD 240
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+A+E + +G S VT+ +NG C++ V A+ V + KG + + T
Sbjct: 241 FNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCT 300
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
L+ LC + + FE + +++ G P+E + LI+GL + G +E A ++ ++
Sbjct: 301 LVLGLC-RIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKL 359
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
G P+L +Y++ I+ K G +E A +L M E + D
Sbjct: 360 GVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPND 400
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 94/197 (47%), Gaps = 2/197 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+ AL+ G ++ G + + ++ M P+ +Y + +E M A +L
Sbjct: 712 PNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQL 771
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M + + V YN +I G+C+IG+ A + M G+ +T+ + YC+
Sbjct: 772 HNAMLQGSFA-NTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCK 830
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+VD+A+ ++ M ++G +P+ LI C + AL + +++ GL PT+
Sbjct: 831 RGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLR-GLKPTQS 889
Query: 425 SYMFLIKGLCEEGKMEE 441
+Y L+ L + ++ +
Sbjct: 890 TYHSLMVQLAQRARLTQ 906
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 135/261 (51%), Gaps = 9/261 (3%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
+A A +G+ V + V PNV T+NAL+ G +EG F+ V + +M PDC++Y+
Sbjct: 213 GEAEALLGEMVNK--GVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYT 270
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ C+ ++ K+ E K V +V+ YN +I G+C+ G+M A + + M +
Sbjct: 271 QVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRN 330
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRV 403
V TF +++G+C G V A+ M G P T LI C +++
Sbjct: 331 RVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIA 390
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
LD+++ ++G+ P ++Y I LC+EG++EEA + + + KG + IY++
Sbjct: 391 LRLLDLME----EYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTS 446
Query: 464 FIDGYMKEGNVEMATMLRKEM 484
+ GY + G+++ A L ++M
Sbjct: 447 LVHGYCQVGDIDSAFGLMEKM 467
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 153/307 (49%), Gaps = 25/307 (8%)
Query: 188 MSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNV 247
+ +G++++V T NALI +GY G D A + + +KR RV P V
Sbjct: 293 IGKGVALEVLTYNALI----------NGY-----CKGGDMKAALDVLQLMKRN-RVNPGV 336
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
TFN ++ GF G K +MA G P+ +++ L++ C + A +L +
Sbjct: 337 QTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDL 396
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M + V D Y I C+ G++ A F + + G+++ +V + LV+GYC+ GD
Sbjct: 397 MEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGD 456
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+DSA + M + P+ T LI LC +R+ A+D+L ++ K G+ PT ++
Sbjct: 457 IDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLD-KMKKQGIEPTTCTFN 515
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEP-----SLEIYSAFIDGYMKEGNVEMATMLRK 482
LIK + + K +A K+ +M+ G +P +L+I + + +G KE N++MA +
Sbjct: 516 ILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVV--- 572
Query: 483 EMFENQV 489
EM E V
Sbjct: 573 EMHEAGV 579
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 1/237 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RP VHT+ L+ G + + E + EM G P+ +Y+ L+ C+E R + K
Sbjct: 193 RPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTK 252
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L E+M + D Y ++ G C+ G++ + E GV +T+ L+NGYC
Sbjct: 253 LLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYC 312
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ GD+ +A+ V M R P T +I C +V +A+ L ++ GL P
Sbjct: 313 KGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFL-TQMAGAGLSPNT 371
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
++ LI G C G+ + AL++ M G P + Y+ FID EG +E A L
Sbjct: 372 VTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSL 428
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 110/247 (44%), Gaps = 2/247 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N L+ + V M G PD ++Y+ LM C + A L
Sbjct: 88 PNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGL 147
Query: 305 WEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ +M R +D +Y +I G C G + A F +M T+ L++G C
Sbjct: 148 FVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLC 207
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ V A + +M KG P T LIG LC + R + +L+ ++ P
Sbjct: 208 KVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRH-SPDC 266
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y ++ GLC+ GK+ KV E +GKG + Y+A I+GY K G+++ A + +
Sbjct: 267 WTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQL 326
Query: 484 MFENQVR 490
M N+V
Sbjct: 327 MKRNRVN 333
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 7/239 (2%)
Query: 242 RVRP-NVHTFNALMVGFYREGA----FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
R+ P +V + NA ++ + G+ + + M + G P+ +Y+ L+ C+
Sbjct: 45 RLDPSDVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLA 104
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS-GVESSSVTF 355
+ +A MR+ + D YN ++ G C G +A A F +M G ++
Sbjct: 105 LLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSY 164
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+ G C AG +D A V+ M R P T VL+ LC RRV EA + L +V
Sbjct: 165 TILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEA-EALLGEMV 223
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
G+ P +Y LI GLC+EG+ ++ K+ +M + P Y+ + G K G V
Sbjct: 224 NKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKV 282
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 140/329 (42%), Gaps = 53/329 (16%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
++ +D+++++ ++ V T N +I G G ++++ + L A AG+
Sbjct: 317 MKAALDVLQLMKRNRVNPGVQTFNEVI------HGFCCGGKVHKAMAFLTQMAGAGLS-- 368
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
PN TFN+L+ G G + + M G PD +Y++ + C+E
Sbjct: 369 --------PNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEG 420
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
++ EA L+ + K ++ V Y +++ G+C++G++ A +M T+
Sbjct: 421 QLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYN 480
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL------CDKRRVFEAL--- 407
L++G C+ +D AI + + M ++G EP T +LI ++ D +++E +
Sbjct: 481 TLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISS 540
Query: 408 ---------------------------DILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
D+ + + G+FP ++Y +IK + G E
Sbjct: 541 GCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKE 600
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
+A +M+ +P YS ++ YM
Sbjct: 601 KAFFAHVKMLSVPIDPDCTTYSILLN-YM 628
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 15/237 (6%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC--EERRMRE 300
V P+V T+NA++ + G EK V+M + +PDC +YS+L+ C ++ +
Sbjct: 579 VFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFD 638
Query: 301 AEKLW------------EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
EK+W E+M + + + Y ++ G C + E +M + +
Sbjct: 639 NEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSI 698
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
++L+ YC A + M + F+P + +L+ LCD A+
Sbjct: 699 LLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVS 758
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
I + ++ G E + LI L E+G L++ + M K S Y++ +
Sbjct: 759 IF-SDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLV 814
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 4/178 (2%)
Query: 316 DVVAYNTIIGGFCEIGE----MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
DV ++N + + G +A F M SG + T+ L+N +C+ + A
Sbjct: 50 DVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADA 109
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
M G P+ T L+ LC + A + ++G SY LIK
Sbjct: 110 RAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIK 169
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
GLC G++++A +V A+M P + Y+ +DG K V A L EM V
Sbjct: 170 GLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGV 227
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 151/314 (48%), Gaps = 17/314 (5%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+ VD+ + S G+S V T N+LI+ + +++E+ +
Sbjct: 260 VNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWN---------- 309
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
++P+V TF+ L+ +EG + V+ +M ++ EPD +YS L+ C+
Sbjct: 310 ------MKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSS 363
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+E+ L EM +N+ DVV ++ + FC+ G ++ A+ M G+ + VT+
Sbjct: 364 LWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYN 423
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L++GYC +D A V++ M KG P+ + +LI C R+ EA + K
Sbjct: 424 SLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHK 483
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
GL P ++ LI GLC+ G+ A ++ +M G P L YS + G+ K G+++
Sbjct: 484 -GLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDE 542
Query: 477 ATMLRKEMFENQVR 490
A L + + ++Q++
Sbjct: 543 ALALFEALKKSQLK 556
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 170/350 (48%), Gaps = 43/350 (12%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDV---IRVALRSPE------------NDPKLKLFE 145
C+ + SY+ II L + RL+ A D+ +R SP N + K
Sbjct: 240 CEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQAS 299
Query: 146 VLVKTYRECGSAPFV--FDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGL----SVKVST 198
+L K E P V F +L+ C E +E + ++++ M + S+
Sbjct: 300 ILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGV 359
Query: 199 CNALIWE---------VSRG-KGVISGYEIYREVF---GLDSDATAGIGKDVKRVVRVRP 245
C + +W+ +SR + + + I+ +VF G+ S+A + I ++R +RP
Sbjct: 360 CKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIER--GLRP 417
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV T+N+LM G+ ++ V+ M GC PD SY++L+ +C+ R+ EA++L+
Sbjct: 418 NVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLF 477
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM K + + + + T+I G C+ G A+E F++MG G +T+ L++G+C+
Sbjct: 478 DEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKH 537
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC------DKRRVFEALDI 409
G +D A+ ++ + + +P ++L+G +C D + +F +L I
Sbjct: 538 GHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSI 587
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 159/394 (40%), Gaps = 90/394 (22%)
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
F+ L+ + +K+ + + V I R + G+S V T LI + V G+ +
Sbjct: 107 FNQLLAALVRMKHYDSV---VSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLG 163
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG----AFEKVED-------- 268
++F L +P++ TFN L+ G EG A E+++
Sbjct: 164 KIFKLG----------------FKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQP 207
Query: 269 ----------------------VWV-EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
VW+ +M L CEP+ SYS+++ C+ R + EA L+
Sbjct: 208 TVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLF 267
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
MR + VV YN++I G C G+ +A F+EM ++ VTF LV+ C+
Sbjct: 268 YHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKE 327
Query: 366 GDVDSAILVY-----------------------------------NDMCRKGFEPEGSTI 390
G V A+ V+ N+M + P+ T
Sbjct: 328 GVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTF 387
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+ + C K V EA I+ + + GL P +Y L+ G C +M+EA KV MV
Sbjct: 388 SIWVDVFCKKGMVSEAQSIINLMIER-GLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMV 446
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
KG P + Y+ I GY K ++ A L EM
Sbjct: 447 NKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEM 480
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 115/282 (40%), Gaps = 34/282 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + FN L+ R ++ V ++ +M G Y+ ++L+ C + +
Sbjct: 102 PCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSV 161
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ + ++ +NT+I G C G + A E + G + + T +VNG C+
Sbjct: 162 LGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCK 221
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD---------------- 408
G +AI+ M EPE + ++I LC R V EA+D
Sbjct: 222 IGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVT 281
Query: 409 ------------------ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
IL ++++ + P ++ L+ LC+EG + EAL V +M+
Sbjct: 282 YNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMI 341
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
EP + YS+ I G K + ++ L EM +R +
Sbjct: 342 QIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPD 383
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 166/353 (47%), Gaps = 23/353 (6%)
Query: 152 RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
+ECG P V L K + K+ ++I +M+ G+ + T + LI + K
Sbjct: 451 KECGFFPSVISYGCLINLYTK-VGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKD 509
Query: 212 VISGYEIYREVF--GLDSD---------ATAGIGKDVKRVV---------RVRPNVHTFN 251
+ + ++ + GL D A G+G ++ R + R RP TF
Sbjct: 510 WANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMG-NMDRAICMVRQMQKERHRPTTRTFL 568
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
++ GF R G + +++ M R GC P ++Y+ L+ E+R+M +A + +EM
Sbjct: 569 PIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVA 628
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
V + Y T++ G+ +G+ +A ++F + G+E T+E L+ C++G + SA
Sbjct: 629 GVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSA 688
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
+ V +M K +LI + V+EA D+++ ++ K GL P +Y I
Sbjct: 689 LAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQ-QMRKEGLLPDIHTYTSFIN 747
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
C+ G M++A ++ EM G +P+L+ Y+ I+G+ + E A +EM
Sbjct: 748 ACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEM 800
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 120/250 (48%), Gaps = 11/250 (4%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ ++ +M G+ G EK V+ + G P SY L+ ++ + ++ +A ++ +
Sbjct: 424 IDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISK 483
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M+ ++H++ Y+ +I GF ++ + A A F + G++ V + +++ +C G
Sbjct: 484 MMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMG 543
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLI---GELCDKRRVFEALDILKARVVKFGLFPTE 423
++D AI + M ++ P T +I + RR E D+++ + G PT
Sbjct: 544 NMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMR----RSGCIPTV 599
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA----TM 479
+Y LI GL E+ +M +A+ + EM G P+ Y+ + GY G+ E A T+
Sbjct: 600 HTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTV 659
Query: 480 LRKEMFENQV 489
LR E E V
Sbjct: 660 LRNEGLEIDV 669
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 118/285 (41%), Gaps = 37/285 (12%)
Query: 242 RVRPNVHTFNALMVGFY-REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
R++ LMV +Y R G + M G EP + YS L+ + R M E
Sbjct: 278 RIKKPARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEE 337
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGF--------------------------------- 327
A +M+++ +E +V Y+ I+GGF
Sbjct: 338 ALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIY 397
Query: 328 --CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
C+I M RAE REM G+++ + +++GY G+ + ++V++ + GF P
Sbjct: 398 AHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFP 457
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+ LI +V +AL+I K + G+ K+Y LI G + A V
Sbjct: 458 SVISYGCLINLYTKVGKVSKALEISKMMKMS-GIKHNMKTYSMLINGFLKLKDWANAFSV 516
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+ G +P + +Y+ I + GN++ A + ++M + + R
Sbjct: 517 FEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHR 561
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 174/398 (43%), Gaps = 39/398 (9%)
Query: 70 TPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR 129
TP + I L N+ AL+FF+ H H SSY I I +R R P+ +
Sbjct: 66 TPQLVNTILKRLWNDGPKALQFFNLLSHHPSYSHHPSSYDHAIDISARLR-DSPSLRSLV 124
Query: 130 VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMS 189
+RS P K F ++ + Y G K V + +
Sbjct: 125 YRMRSARLGPTPKTFAIIAERYASAG--------------------KPHRAVKVFLSMHQ 164
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
G + + N ++ + + K V Y +++ G + R + +
Sbjct: 165 FGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKG-----------------KFRADCVS 207
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N ++ G+ K ++ EM + G P+ SY+ ++ + ++ EA + EM+
Sbjct: 208 YNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMK 267
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
++ E DV+ Y T+I GF GE+ RA + F M GV S T+ + C+ +VD
Sbjct: 268 KRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVD 327
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+AI+++ +M KG+ P T ++I LC + + A++ + R+ G P ++Y +
Sbjct: 328 NAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFM-GRMKDDGCEPNVQTYNLV 386
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
I+ C+EG++++AL + +M P+L+ Y+ I
Sbjct: 387 IRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISA 424
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
TF + Y AG A+ V+ M + G + + ++ LC +RV A ++ K
Sbjct: 138 TFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFK-- 195
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
V K SY ++ G C + +AL++ EMV +G P+L Y+ + GY + G
Sbjct: 196 VFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQ 255
Query: 474 VEMA 477
+ A
Sbjct: 256 INEA 259
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 34/276 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN T++A++ G ++ V + C PD + +VL+ C+E + +A
Sbjct: 177 VSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAM 236
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL+ EMR+K + DVV YN +I GFC+ G + A F +++ G + ++ ++
Sbjct: 237 KLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSL 296
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA---------- 412
C G A+ + M RKG P T +LI LC K + +AL++L+
Sbjct: 297 CSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNS 356
Query: 413 -----------------RVVKF-------GLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
R +++ G +P +Y L+ LC++GK+++A+ + ++
Sbjct: 357 RSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQ 416
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ KG PSL Y+ IDG +K G E+A L +EM
Sbjct: 417 LSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEM 452
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 1/210 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +FN L+ GF ++ + M GC PD +Y++L+ C++ ++ +A +
Sbjct: 354 PNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVI 413
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ K +++YNT+I G ++G+ A E EM G++ +T +V G R
Sbjct: 414 LSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSR 473
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G V A+ ++ + R P +I LC ++ A+D L V K G PTE
Sbjct: 474 EGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAK-GCKPTEA 532
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+Y LIKG+ EG E+A K+ E+ +G
Sbjct: 533 TYTTLIKGITYEGLAEDASKLSNELYSRGL 562
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 119/241 (49%), Gaps = 1/241 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN L+ ++G K +V M + G P+ S++ L+ FC + + A +
Sbjct: 319 PSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEY 378
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M + D+V YN ++ C+ G++ A ++ G S +++ +++G +
Sbjct: 379 LEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLK 438
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A+ + +MC KG +P+ T ++G L + +V EA+ + +F + P
Sbjct: 439 VGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFH-YLKRFAIRPNAF 497
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y +I GLC+ + A+ A+MV KG +P+ Y+ I G EG E A+ L E+
Sbjct: 498 IYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNEL 557
Query: 485 F 485
+
Sbjct: 558 Y 558
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ E + E M +K DV+A +I FC+IG A + + SG ++
Sbjct: 95 LEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNV 154
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++GYC++G+++ A+ V + R G P +T + ++ LCD+ ++ +A+ +L R ++
Sbjct: 155 LISGYCKSGEIEEALRVLD---RMGVSPNAATYDAVLCSLCDRGKLKQAMQVL-GRQLQS 210
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+P + LI C+E + +A+K+ EM KG +P + Y+ I G+ K G ++ A
Sbjct: 211 KCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEA 270
Query: 478 TMLRKEM 484
K++
Sbjct: 271 IRFLKKL 277
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 33/246 (13%)
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
R G E+ M G PD + + L+ FC+ R + A ++ + + DV
Sbjct: 91 RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLS--------------------------GVESSS 352
+YN +I G+C+ GE+ A MG+S G + S
Sbjct: 151 SYNVLISGYCKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQS 210
Query: 353 ------VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
VT L++ C+ V A+ ++N+M KG +P+ T VLI C R+ EA
Sbjct: 211 KCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEA 270
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ LK ++ +G P S+ +++ LC G+ +A+K+ A M+ KG PS+ ++ I+
Sbjct: 271 IRFLK-KLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILIN 329
Query: 467 GYMKEG 472
++G
Sbjct: 330 FLCQKG 335
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 58/140 (41%), Gaps = 16/140 (11%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ K E V+++ + +GL + TC +++ +SR V + + +
Sbjct: 439 VGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYL----------- 487
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
KR +RPN +N+++ G + D +M GC+P +Y+ L+
Sbjct: 488 ----KRFA-IRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGIT 542
Query: 294 EERRMREAEKLWEEMRDKNV 313
E +A KL E+ + +
Sbjct: 543 YEGLAEDASKLSNELYSRGL 562
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 120/244 (49%), Gaps = 1/244 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEERRMREAEK 303
P+ T N L+ G R K +V + R G C P+ +Y+ +++ +C+ RM +A
Sbjct: 267 PDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMA 326
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ +M +VV YN +I G+ + G M A +++M L VTF L++GYC
Sbjct: 327 VYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYC 386
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G +D A+ ++ +M + +P T ++I C + R EAL LK ++ + P
Sbjct: 387 RCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQA 446
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
Y +I LC+ GK++EA + EM KG P Y+ I G+ +G + A +
Sbjct: 447 FIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHK 506
Query: 484 MFEN 487
M E
Sbjct: 507 MVET 510
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 3/219 (1%)
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV-EHDVVAYNTIIGGFCEIGE 332
++ GC + Y+Y+ LM +F R+++A L+E V DV ++N +I G C++G+
Sbjct: 190 SQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGD 249
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF-EPEGSTIE 391
+ +A E M G +VT LVNG CRA +V V + R G P T
Sbjct: 250 VQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYT 309
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+I C R+ +A+ + +V G P +Y LI G + G M A+ V +M+
Sbjct: 310 SVISGYCKAGRMEDAMAVYN-DMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMIL 368
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+ P + +S+ IDGY + G ++ A + EM + ++
Sbjct: 369 RRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQ 407
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 39/250 (15%)
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN--------------------- 312
++L P +SY ++++ C+ R +A +L+++M D++
Sbjct: 119 SQLAMPPSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGL 178
Query: 313 ---------------VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV-TFE 356
+ AYN ++ F G + A F GV S V +F
Sbjct: 179 LDAAAALLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFN 238
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
++ G C+ GDV A+ + M G P+ T +L+ LC + V + ++L+ R+ +
Sbjct: 239 VVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLR-RLQR 297
Query: 417 FGL-FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G+ P +Y +I G C+ G+ME+A+ V +MV G P++ Y+ I+GY K GN+
Sbjct: 298 DGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMG 357
Query: 476 MATMLRKEMF 485
A + ++M
Sbjct: 358 SAVAVYQQMI 367
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 116/302 (38%), Gaps = 72/302 (23%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C ++ +++ L RA+ + R+V+R R P + + ++ Y + G
Sbjct: 265 CSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAG----- 319
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
++E + + +++ G S V T N LI + + S +Y+
Sbjct: 320 ---------------RMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQ 364
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
++ + R P+V TF++L+ G+ R G + +W EMA+ +P
Sbjct: 365 QMI----------------LRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQP 408
Query: 281 DCYSYSVLMAVFCEERR------------MR------------------------EAEKL 304
+ +++ +++ FC++ R MR EA +
Sbjct: 409 NAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMI 468
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM +K D Y +I G C G +A A FF +M +G S+ ++ +
Sbjct: 469 LIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLK 528
Query: 365 AG 366
+G
Sbjct: 529 SG 530
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P +N ++ + G ++ + +EM GC PD Y+Y++L+ C + R+ EA
Sbjct: 442 IAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAV 501
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
+ +M + D + N+ I + G + R + G SS
Sbjct: 502 TFFHKMVETGCSPDSIVVNSFISCLLKSGMPGEVDHIMR-IAAGGASSS 549
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 137/300 (45%), Gaps = 9/300 (3%)
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR------VRPNVH 248
+V ++L E+ RG Y + GL AG KD + +PNV
Sbjct: 130 RVDHASSLFDEMIRGGHHPDRLMFYELILGL---CQAGKVKDASERFKQMPKHGCQPNVP 186
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+N L+ G G E+ ++ EM C PD +Y+ L+ C+ RR+ E KL+E M
Sbjct: 187 VYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAM 246
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
R +V+ ++T+I G C GE+ +A E F M +G + + T+ L++G CRA V
Sbjct: 247 RAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKV 306
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A ++ M + P+ LI C + + EA + + GL PT ++
Sbjct: 307 IQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNT 366
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI G C+ GK+ A ++ AEM KG Y I G + ++ A + K+M E +
Sbjct: 367 LIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKK 426
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 172/395 (43%), Gaps = 73/395 (18%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL--------VKTYRE-- 153
S+ +Y++++ L++AR + A + +R + +L +E++ VK E
Sbjct: 114 SMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERF 173
Query: 154 -------CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
C V+++L+ +E+ T + + S S V T N L+ V
Sbjct: 174 KQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANT---LFAEMKSHSCSPDVVTYNTLLDAV 230
Query: 207 SRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
+ + V G +++ + R PNV TF+ L+ G R G EK
Sbjct: 231 CKARRVEEGCKLF----------------EAMRAAGYVPNVITFSTLIHGLCRTGELEKA 274
Query: 267 EDVWVEMARLGCEPDCYSYSVLM-----------------------------------AV 291
+V+ M GC+P+ Y+Y+ L+ A
Sbjct: 275 LEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAG 334
Query: 292 FCEERRMREAEKLWEEMRD-KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+C+ M EAEKL+ EM ++ +V +NT+I GFC++G++ RA E EMG G+ +
Sbjct: 335 YCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAA 394
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
S T+ L+ G RA +D A+ VY M K F + + +G LC + +A +
Sbjct: 395 DSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVF 454
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+A K G P +++ L + L + G++E+A K+
Sbjct: 455 EA-TRKSGAVPNPETFRILSESLIKLGRVEDAQKL 488
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 118/246 (47%), Gaps = 1/246 (0%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
R + NV T+++++ +E E+ V EM GC PD ++++ +M F M
Sbjct: 2 RDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNM 61
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+A ++++ M + + D V+Y+ +I G +IG++ + + EM + G S + L
Sbjct: 62 EKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSL 121
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
V +A VD A ++++M R G P+ LI LC +V +A + K ++ K G
Sbjct: 122 VRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFK-QMPKHG 180
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
P Y L+ GLC G++E+A + AEM P + Y+ +D K VE
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240
Query: 479 MLRKEM 484
L + M
Sbjct: 241 KLFEAM 246
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 126/276 (45%), Gaps = 37/276 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ +++L+ + + ++ EM R G PD + L+ C+ ++++A +
Sbjct: 113 PSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASER 172
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG-------------------- 344
+++M + +V YN ++ G C G++ +A F EM
Sbjct: 173 FKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCK 232
Query: 345 ---------------LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
+G + +TF L++G CR G+++ A+ V+ M G +P T
Sbjct: 233 ARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYT 292
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
LI LC +V +A ++ + ++ + + P +Y LI G C+ G M+EA K+ EM
Sbjct: 293 YTTLISGLCRAEKVIQARELFE-KMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 351
Query: 450 V-GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G G +P++ ++ IDG+ K G + A L EM
Sbjct: 352 SGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEM 387
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 308 MRDKNV-----------------------------------EHDVVAYNTIIGGFCEIGE 332
MRDKN+ DV A+N ++ GF
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
M +A E ++ M SG + +V++ L++G + G +D ++ + ++M +G P
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
L+ L RRV A + +++ G P + LI GLC+ GK+++A + +M
Sbjct: 121 LVRALAKARRVDHASSLFD-EMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH 179
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G +P++ +Y+ + G G +E A L EM
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEM 211
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +IK L +E K EE+ KV EM+ G P + ++ + G+ + N+E A + + M
Sbjct: 12 TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71
Query: 485 FENQVRQED 493
E+ + ++
Sbjct: 72 VESGYKPDN 80
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/480 (23%), Positives = 211/480 (43%), Gaps = 50/480 (10%)
Query: 18 PKPQLLSQFSTSSSTPPSD---QSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQF 74
P P+ + F+ S S+ Q ++ +++LL S S ++L CR L
Sbjct: 59 PPPEWIEPFNDVSDLVKSNRNLQPSPWVSQILNLLDG--SASMESNLDGFCRKFLIKLSP 116
Query: 75 SQIALGLKNN-----PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR 129
+ ++ LK++ P +A FF +++ + H+L Y +++ +L+ A+ + R I
Sbjct: 117 NFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIR-FIC 175
Query: 130 VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMS 189
+R E + L+K++ + G +E + + R +
Sbjct: 176 SEIRKFEFPMTVSPGNSLIKSFGKLG--------------------MVEELLWVWRKMKE 215
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
G+ + T N L+ + V S ++ +V R++P+V T
Sbjct: 216 NGIEPTLYTYNFLMNGLVSAMFVDSAERVF----------------EVMESGRIKPDVVT 259
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N ++ G+ + G +K + M G E D +Y ++ + L++EM
Sbjct: 260 YNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMD 319
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+K ++ A++ +IGG C+ G++ F M G + + + L++GY + G V+
Sbjct: 320 EKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVE 379
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF-GLFPTEKSYMF 428
AI + + M +GF P+ T V++ LC RV EA+D + +F GL Y
Sbjct: 380 DAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQ--TCRFNGLAINSMFYSS 437
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI GL + G+++EA ++ EM KG Y+A ID + K G V+ A L K M E +
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEE 497
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 127/300 (42%), Gaps = 42/300 (14%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIE---------------KIETCVDI 183
P + ++ VL+ Y + GS LL + E N + ++E +D
Sbjct: 360 PNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDY 419
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRV 243
+ GL++ ++LI + + V ++ E+ + G +D
Sbjct: 420 FQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM------SEKGCTRDS------ 467
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARL----GCEPDCYSYSVLMAVFCEERRMR 299
+ +NAL+ F + G KV++ R+ GC+ Y+Y++L++ +E R
Sbjct: 468 ----YCYNALIDAFTKHG---KVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNE 520
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
EA KLW+ M DK + + G C G++ARA + E+ GV + E ++
Sbjct: 521 EALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMI 579
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
N C+AG + A + + + +G E G V+I L R+V +A +K K G+
Sbjct: 580 NTLCKAGRIKEACKLADGITERGREVPGRIRTVMINAL---RKVGKADLAMKLMHSKIGI 636
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 197/435 (45%), Gaps = 48/435 (11%)
Query: 77 IALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPE 136
+ L PH A+R F + + L + + A ++ L+RAR+ AR
Sbjct: 116 LVLAQSARPHDAVRVFDHMRARGLAPDAHACTA-LLTALARARMTATAR----------- 163
Query: 137 NDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKV 196
++F+ + + + V++ ++ CL+ + + E IV + + G+++
Sbjct: 164 -----RVFDEMARA--GLAATTHVYNAMLHVCLKAGDAAQAEA---IVTRMDAAGVTLDR 213
Query: 197 STCNALIWEVSRGKGVISGYEIY-----REVFGLDSDATA------GIGKD--VKRVVRV 243
+ N +I R KG+ GYE + G+ D G+ K+ VK ++
Sbjct: 214 FSYNTVIALYCR-KGM--GYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQL 270
Query: 244 ---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
P+ T+ L+ G+ R G E+ + M G P +Y+ ++ CE
Sbjct: 271 FTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCE 330
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ M+E +L EM + V+ D V NT+I +C+ G+M A + ++M SG++ + T
Sbjct: 331 DGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFT 390
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
++ L++G+C+A ++D A + M GF P S L+ C K +A+ + +
Sbjct: 391 YKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNA-DAVLAIPDEL 449
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+K GL P + Y LI+ LC +G +++A +V +M KG +Y+ Y+ +GN
Sbjct: 450 MKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTKGNP 509
Query: 475 EMATMLRKEMFENQV 489
A M +NQ+
Sbjct: 510 TAALNTLDGMTKNQL 524
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 1/224 (0%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
V+ M G PD ++ + L+ R A ++++EM + YN ++
Sbjct: 130 VFDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAATTHVYNAMLHVCL 189
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ G+ A+AE M +GV ++ ++ YCR G A+ + M ++G P+
Sbjct: 190 KAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEGIRPDTV 249
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
T I LC + RV EA + +V P +Y LI G C G +EEA+K++
Sbjct: 250 TWNSSIHGLCKEGRVKEAAQLF-TEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGR 308
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
M G P + Y+A + ++GN++ L EM +V+ +
Sbjct: 309 MEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQAD 352
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 1/199 (0%)
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
S L+ V + R +A ++++ MR + + D A ++ A A F EM
Sbjct: 112 SWLVLVLAQSARPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMAR 171
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
+G+ +++ + +++ +AGD A + M G + + +I C K +E
Sbjct: 172 AGLAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYE 231
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
A+ + R+ K G+ P ++ I GLC+EG+++EA ++ EMV P Y+ I
Sbjct: 232 AM-CARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLI 290
Query: 466 DGYMKEGNVEMATMLRKEM 484
DGY + GNVE A LR M
Sbjct: 291 DGYCRAGNVEEAVKLRGRM 309
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 123/242 (50%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P V TFN LM G + + MA+ G PD Y+Y + C+ R+++A
Sbjct: 273 VQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAM 332
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++EEM ++ + + V T+I C+ G++ E EM GV++ V + LVNG+
Sbjct: 333 EMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGF 392
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR D+ +A + +M + G +P+ T LI C + + A++ +K + G+
Sbjct: 393 CRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAME-MKQEMSDEGVALD 451
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ +Y LI GL + G+ +A ++ EM+ G +P Y+ ID + K G+V+ K
Sbjct: 452 DVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLK 511
Query: 483 EM 484
EM
Sbjct: 512 EM 513
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 141/296 (47%), Gaps = 20/296 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+I+ +++ + RGL+ LI + V +G E+ E+ AT G+
Sbjct: 327 RIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEM------ATRGVKA 380
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ +NAL+ GF R + D+ EM + G +PD +Y+ L+ C+E
Sbjct: 381 DLV----------AYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKE 430
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ A ++ +EM D+ V D V Y +I G + G AE EM +G++ + T+
Sbjct: 431 GELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTY 490
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++ +C+ GDV + +M KG P T V++ C ++ A D+L ++
Sbjct: 491 TMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNA-DMLLNAML 549
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
G+ P + +Y L+ G C+ GK+ + ++++ KG +Y++ I+ ++K+
Sbjct: 550 NIGVCPNDITYNILLDGHCKHGKVRDTEELKS---AKGMVSDFGVYTSLINEFVKK 602
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 7/227 (3%)
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
++ + G P+ +++LM ++ A +++EM + V+ VV +NT++ G C+
Sbjct: 230 YLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCK 289
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
++ A M +G+ T+ + G C+ G + A+ ++ +MC +G P
Sbjct: 290 ASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVV 349
Query: 390 IEVLIGELCDKRRVFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
+ LI C + V L++ + R VK L +Y L+ G C M+ A +
Sbjct: 350 LTTLIDAHCKEGDVTAGLELRWEMATRGVKADLV----AYNALVNGFCRVRDMKAANDIV 405
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
EM G +P Y+ IDG KEG ++ A +++EM + V +D
Sbjct: 406 EEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDD 452
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 1/157 (0%)
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A F+ + +GV + F L+ R+G + SA V+++M R+G +P T L+
Sbjct: 226 AYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMS 285
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
+C + A + L+ + K G+ P +Y I+GLC+ G++++A+++ EM +G
Sbjct: 286 GMCKASDLNNA-NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLN 344
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
P+ + + ID + KEG+V LR EM V+ +
Sbjct: 345 PNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKAD 381
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 177/436 (40%), Gaps = 46/436 (10%)
Query: 72 TQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVA 131
T FS+ AL L LR F+ + + ++Y +I L R + A+ + +
Sbjct: 101 THFSRYALT-----PLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155
Query: 132 LRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMS 189
+RS G P F F+ LI L +++E D+ +
Sbjct: 156 VRS--------------------GWRPDAFTFNSLI---LGYCRTQQLEVAHDLFCKMPF 192
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR------- 242
RG S + ALI + E++RE+ D A + K + R
Sbjct: 193 RGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGRGEEGLCM 252
Query: 243 --------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
RP + AL+ + RE E+ E + EM G P + ++++ +C
Sbjct: 253 LQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCR 312
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E RM A +++E MR K E +V YN I+ GFC G++ +A +M GVE VT
Sbjct: 313 EGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVT 372
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ G C G + SA + M G + T VLI LC +V EA +
Sbjct: 373 YNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLE 432
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ G+ P ++ +I GLC+ GK + A M+ G+ P YS FI+ K
Sbjct: 433 YR-GIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGS 491
Query: 475 EMATMLRKEMFENQVR 490
+ EM + V+
Sbjct: 492 QEGLFFIDEMLQKDVK 507
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 111/240 (46%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+NA++ GF G K + +M G EPD +Y++L+ C + + A +L
Sbjct: 333 PNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRL 392
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M + D YN +I C+ G++ A F + G+ +SVTF ++NG C+
Sbjct: 393 LRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK 452
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG D A +M G+ P+ T I LC + E L + + K + P+
Sbjct: 453 AGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQK-DVKPSTV 511
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I L E A ++ +MV +G P + Y+ + Y EG ++ A + EM
Sbjct: 512 NYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEM 571
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 134/334 (40%), Gaps = 39/334 (11%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K + + ++S G + T + I + + KG G +F +D + K
Sbjct: 455 KFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEG------LFFIDE----MLQK 504
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
DVK P+ + ++ + E + +W +M GC PD +Y+ + +C E
Sbjct: 505 DVK------PSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNE 558
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ EAE + EM+ D +AYNT+I G IG+ RA + M +GV S F
Sbjct: 559 GRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHM--TGVASMPNHF 616
Query: 356 EHLVNGY------------CRAGDVDSAILVYN-----DMCRKGFEPEGSTIEVLIGELC 398
+ +A V I + + ++ +K P + + I E
Sbjct: 617 TFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGF 676
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ R + + L + + + L E Y L+ C+ +A + M+G GF P+L
Sbjct: 677 SEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNL 736
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
Y + G EG + A KE+F + +E
Sbjct: 737 IFYQYLLSGLTAEGQADRA----KEIFRSSRWKE 766
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+Y ++ F EERR+ E L M+++N+ + YN ++ FC++ + A M
Sbjct: 668 TYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSM 727
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G + + +++L++G G D A ++ K + + +V+I K
Sbjct: 728 IGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHA 787
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGL 433
D++ + + + P++++Y L + L
Sbjct: 788 DMCHDMI-SMLEQMKCKPSDETYAMLTEEL 816
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 120/243 (49%), Gaps = 1/243 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNVHT+ A++ G+ +E + E + M G P+ +Y+ L+ C+ A +
Sbjct: 362 KPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYE 421
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L + M + ++ YN II G C+ G + A ++ + G+++ VT+ L++ +C
Sbjct: 422 LMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHC 481
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R D + +++ +N M + GF P+ + LI C ++++ E+ + L V GL PT+
Sbjct: 482 RQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKES-ERLFEEAVSLGLIPTK 540
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
K+Y +I G C G A+K+ M G P Y A I G KE ++ A L
Sbjct: 541 KTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDA 600
Query: 484 MFE 486
M +
Sbjct: 601 MMD 603
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 4/249 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T N ++ G E E+++VEM + G PDC S+ +++ C R+ EAE+
Sbjct: 187 PSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERW 246
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M ++ D II FC+ G + R +F +M G+ + + F L+NG C+
Sbjct: 247 LNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCK 306
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A + +M R+G++P T LI LC K +A + V G P
Sbjct: 307 QGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVH 366
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV----EMATML 480
+Y +I G C+E K+ A + + M +G P+ Y+ IDG+ K GN E+ ++
Sbjct: 367 TYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLM 426
Query: 481 RKEMFENQV 489
KE F +
Sbjct: 427 GKEGFSPNI 435
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 126/260 (48%), Gaps = 9/260 (3%)
Query: 229 ATAGIG-KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
ATA IG K+++R V +++ F G ++ ++ VEM G P + +
Sbjct: 141 ATALIGNKNLERANEV------MQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNC 194
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
++ V + AE ++ EM + V D V++ ++ C +G + AE + M G
Sbjct: 195 VLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERG 254
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ T +++ +C+ G V+ + + M G P LI LC + + +A
Sbjct: 255 FIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAF 314
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV-GKGFEPSLEIYSAFID 466
++L+ +V+ G P ++ LI GLC++G E+A ++ ++V G++P++ Y+A I+
Sbjct: 315 ELLE-EMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMIN 373
Query: 467 GYMKEGNVEMATMLRKEMFE 486
GY KE + A ML M E
Sbjct: 374 GYCKEDKLNRAEMLLSRMQE 393
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 119/244 (48%), Gaps = 4/244 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN++T+NA++ G ++G+ ++ + +++ G + D +Y++LM+V C + +
Sbjct: 433 PNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF 492
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M D+ +Y T+I FC +M +E F E G+ + T+ ++ GYCR
Sbjct: 493 FNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCR 552
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ A+ ++ M G P+ T LI LC + ++ +A ++ A + K GL P E
Sbjct: 553 YGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDK-GLSPCEV 611
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ + L C++ A+ V + + + + + + EG ++MA + ++
Sbjct: 612 TRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKL 668
Query: 485 FENQ 488
+ +
Sbjct: 669 LDKE 672
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV TFN L+ R+G E +V ++ + GC P+ SY+ L+ FC++++M +A
Sbjct: 95 PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAF 154
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + D+V+YNT++ C GE+ A E ++ G +++ +++G +
Sbjct: 155 LDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTK 214
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG A+ + N+M KG +P+ T + LC + R+ +A+ +V G+ P
Sbjct: 215 AGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF-GKVQDMGIRPNTV 273
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y +I GLC+ + A+ + A M+G G P+ Y+ I+G EG ++ A L E+
Sbjct: 274 LYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 118/233 (50%), Gaps = 1/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N ++ G +EG + + + GCEP+ SY++++ C R +AE+L
Sbjct: 25 PDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 84
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM K +VV +N +I C G + A E ++ G +S+++ L++ +C+
Sbjct: 85 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCK 144
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+D A+ + M +G P+ + L+ LC V A+++L ++ G P
Sbjct: 145 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH-QLKDKGCAPVLI 203
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
SY +I GL + GK +EAL++ EMV KG +P + YS G +E +E A
Sbjct: 204 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 256
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 1/234 (0%)
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ +++ + EM GC PD +Y+V++ C+E R+ +A + + + E + V
Sbjct: 4 KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 63
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+YN ++ G C AEE EMG G + VTF L++ CR G V+ A+ V +
Sbjct: 64 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 123
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+ G P + L+ C ++++ +A+ L V + G +P SY L+ LC G+
Sbjct: 124 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR-GCYPDIVSYNTLLTALCRSGE 182
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
++ A+++ ++ KG P L Y+ IDG K G + A L EM ++ +
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 236
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N L+ F ++ +K M GC PD SY+ L+ C + A +L
Sbjct: 130 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 189
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++DK +++YNT+I G + G+ A E EM G++ +T+ + G CR
Sbjct: 190 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 249
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
++ AI + + G P +I LC +R A+D+ A ++ G P E
Sbjct: 250 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLF-AYMIGNGCMPNES 308
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+Y LI+GL EG ++EA + E+ +G
Sbjct: 309 TYTILIEGLAYEGLIKEARDLLDELCSRG 337
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 1/192 (0%)
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C+ ++A KL +EMRDK D+V YN ++ G C+ G + A EF + + G E ++
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
V++ ++ G C A + A + +M +KG P T +LI LC K V AL++L+
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE- 121
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
++ K+G P SY L+ C++ KM++A+ MV +G P + Y+ + + G
Sbjct: 122 QIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSG 181
Query: 473 NVEMATMLRKEM 484
V++A L ++
Sbjct: 182 EVDVAVELLHQL 193
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 119/243 (48%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N ++ G +E E++ EM + GC P+ ++++L++ C + + A ++
Sbjct: 60 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEV 119
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E++ + ++YN ++ FC+ +M +A F M G V++ L+ CR
Sbjct: 120 LEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 179
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G+VD A+ + + + KG P + +I L + EAL++L V K GL P
Sbjct: 180 SGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK-GLQPDII 238
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y + GLC E ++E+A++ ++ G P+ +Y+A I G K A L M
Sbjct: 239 TYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM 298
Query: 485 FEN 487
N
Sbjct: 299 IGN 301
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C ++ ++ +I L R L+ PA +V+ E PK C
Sbjct: 93 CPPNVVTFNMLISFLCRKGLVEPALEVL-------EQIPKYG-----------CTPNSLS 134
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
++ L+ + K ++K +D +++SRG + + N L+ + R V E+
Sbjct: 135 YNPLLHAFCKQKKMDKAMAFLD---LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH 191
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
++ KD P + ++N ++ G + G ++ ++ EM G +P
Sbjct: 192 QL------------KDKG----CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQP 235
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D +YS + A C E R+ +A + + +++D + + V YN II G C+ E A + F
Sbjct: 236 DIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLF 295
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
M +G + T+ L+ G G + A + +++C +G
Sbjct: 296 AYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 337
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 166/364 (45%), Gaps = 34/364 (9%)
Query: 124 ARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDI 183
A + +RV +R E D L+L + L G P + C +K + D
Sbjct: 70 ATERLRVLVRRGELDDALRLVDSLA------GLNPPSPAAVGPCAALIKKLCASGRTADA 123
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR- 242
R+L + G V V NA++ +GY AG +R+V
Sbjct: 124 RRVLAASGPDVMVY--NAMV----------AGY------------CGAGQLDAARRLVAD 159
Query: 243 --VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V P+ +T+N L+ G G V +M R GC PD +Y++L+ C+ ++
Sbjct: 160 MPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQ 219
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A KL +EM DK D+V YN ++ G C+ G + A EF + + G E ++V++ ++
Sbjct: 220 AMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLK 279
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G A + A + +M KG P T +LI LC + V A+++L+ ++ ++G
Sbjct: 280 GLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLE-QMPQYGCT 338
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P SY L+ C++ K+ +A++ MV +G P + Y+ + + G V++A L
Sbjct: 339 PNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIEL 398
Query: 481 RKEM 484
++
Sbjct: 399 LHQL 402
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 124/241 (51%), Gaps = 5/241 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV TFN L+ R G E +V +M + GC P+ SY+ L+ FC+++++ +A +
Sbjct: 304 PNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEF 363
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M + D+V+YNT++ C GE+ A E ++ G +++ +++G +
Sbjct: 364 VELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTK 423
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG A+ + ++M KG +P+ T + LC + R+ EA+ +V G+ PT
Sbjct: 424 AGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTF-CKVQDMGIRPTAA 482
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y ++ GLC+ + A+ + A M+ G P+ Y+ ++G EG V+ A +E+
Sbjct: 483 LYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEA----REL 538
Query: 485 F 485
F
Sbjct: 539 F 539
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 1/209 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N L+ F ++ K + M GC PD SY+ L+ C + A +L
Sbjct: 339 PNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIEL 398
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++DK +++YNT+I G + G+ A E EM G++ +T+ + +G CR
Sbjct: 399 LHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCR 458
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
++ A+ + + G P + ++ LC +R A+D+ A ++ G P E
Sbjct: 459 EDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLF-AYMISSGCMPNES 517
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+Y L++GL EG ++EA ++ A++ +G
Sbjct: 518 TYTILVEGLAYEGLVKEARELFAQLCSRG 546
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 113/226 (50%), Gaps = 1/226 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N ++ G + +E E + EMA GC P+ ++++L++ C + A ++
Sbjct: 269 PNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEV 328
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+M + ++YN ++ FC+ ++ +A EF M G V++ L+ CR
Sbjct: 329 LEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCR 388
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+VD AI + + + KG P + +I L + EAL++L K GL P
Sbjct: 389 NGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSK-GLQPDII 447
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+Y + GLC E ++EEA++ ++ G P+ +Y+A + G K
Sbjct: 448 TYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCK 493
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 120/286 (41%), Gaps = 38/286 (13%)
Query: 97 HKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGS 156
HK C ++ ++ +I L R L+ PA +V+ E P+ C
Sbjct: 299 HKG-CPPNVVTFNMLISFLCRRGLVEPAMEVL-------EQMPQYG-----------CTP 339
Query: 157 APFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGY 216
++ L+ + K I K ++ V +++SRG + + N L+ + R V
Sbjct: 340 NSLSYNPLLHAFCKQKKIHKA---MEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAI 396
Query: 217 EIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
E+ ++ KD P + ++N ++ G + G ++ ++ EM
Sbjct: 397 ELLHQL------------KDKG----CSPVLISYNTVIDGLTKAGKTKEALELLDEMTSK 440
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G +PD +YS + + C E R+ EA + + +++D + YN I+ G C+ E A
Sbjct: 441 GLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNA 500
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+ F M SG + T+ LV G G V A ++ +C +G
Sbjct: 501 IDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRG 546
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 32/168 (19%)
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST----IEVLIGELC------ 398
++SS + + R G++D A+ + + + G P LI +LC
Sbjct: 64 KASSASATERLRVLVRRGELDDALRLVDSL--AGLNPPSPAAVGPCAALIKKLCASGRTA 121
Query: 399 DKRRVFEA--------------------LDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
D RRV A LD + V + P +Y LI+GLC G+
Sbjct: 122 DARRVLAASGPDVMVYNAMVAGYCGAGQLDAARRLVADMPVEPDAYTYNTLIRGLCGRGR 181
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
AL V +M +G P + Y+ ++ K + A L EM +
Sbjct: 182 TSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHD 229
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDA---- 229
+++ ++++ L +G S + + N +I +++ E+ E+ GL D
Sbjct: 391 EVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYS 450
Query: 230 --TAGIGKD--VKRVVR---------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+G+ ++ ++ VR +RP +NA+++G + D++ M
Sbjct: 451 TIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISS 510
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
GC P+ +Y++L+ E ++EA +L+ ++ + V
Sbjct: 511 GCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 124/242 (51%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V + +T + L+ G G V EM R C PD +Y++L+ C+ ++A
Sbjct: 156 VERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 215
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL +EMRDK D+V YN ++ G C+ G + A EF + + G E ++V++ ++ G
Sbjct: 216 KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 275
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C A + A + +M +KG P T +LI LC K V AL++L+ ++ K+G P
Sbjct: 276 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE-QIPKYGCSPN 334
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY L+ C++ KM++A+ MV +G P + Y+ + + G V++A L
Sbjct: 335 SLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH 394
Query: 483 EM 484
++
Sbjct: 395 QL 396
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV TFN L+ R+G E +V ++ + GC P+ SY+ L+ FC++++M +A
Sbjct: 298 PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAF 357
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + D+V+YNT++ C GE+ A E ++ G +++ +++G +
Sbjct: 358 LDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTK 417
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG A+ + N+M KG +P+ T + LC + R+ +A+ +V G+ P
Sbjct: 418 AGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF-GKVQDMGIRPNTV 476
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y +I GLC+ + A+ + A M+G G P+ Y+ I+G EG ++ A L E+
Sbjct: 477 LYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 536
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 133/269 (49%), Gaps = 3/269 (1%)
Query: 224 GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
G ++A A + + ++R R P+V T+ L+ + +++ + EM GC PD
Sbjct: 174 GRTANALAVLDEMLRR--RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIV 231
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+Y+V++ C+E R+ +A + + + E + V+YN ++ G C AEE EM
Sbjct: 232 TYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 291
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G G + VTF L++ CR G V+ A+ V + + G P + L+ C ++++
Sbjct: 292 GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKM 351
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
+A+ L V + G +P SY L+ LC G+++ A+++ ++ KG P L Y+
Sbjct: 352 DKAMAFLDLMVSR-GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 410
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQVRQE 492
IDG K G + A L EM ++ +
Sbjct: 411 VIDGLTKAGKTKEALELLNEMVSKGLQPD 439
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 4/240 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N L+ F ++ +K M GC PD SY+ L+ C + A +L
Sbjct: 333 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 392
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++DK +++YNT+I G + G+ A E EM G++ +T+ + G CR
Sbjct: 393 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 452
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
++ AI + + G P +I LC +R A+D+ A ++ G P E
Sbjct: 453 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLF-AYMIGNGCMPNES 511
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY---SAFIDGYMKEGNVEMATMLR 481
+Y LI+GL EG ++EA + E+ +G E L+++ AF+ ++ N LR
Sbjct: 512 TYTILIEGLAYEGLIKEARDLLDELCSRGEEILLDVHLIDVAFLTTFLPCSNANGGPFLR 571
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 119/243 (48%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N ++ G +E E++ EM + GC P+ ++++L++ C + + A ++
Sbjct: 263 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEV 322
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E++ + ++YN ++ FC+ +M +A F M G V++ L+ CR
Sbjct: 323 LEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 382
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G+VD A+ + + + KG P + +I L + EAL++L V K GL P
Sbjct: 383 SGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK-GLQPDII 441
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y + GLC E ++E+A++ ++ G P+ +Y+A I G K A L M
Sbjct: 442 TYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM 501
Query: 485 FEN 487
N
Sbjct: 502 IGN 504
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 122/284 (42%), Gaps = 37/284 (13%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C ++ ++ +I L R L+ PA +V+ E PK C
Sbjct: 296 CPPNVVTFNMLISFLCRKGLVEPALEVL-------EQIPKYG-----------CSPNSLS 337
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
++ L+ + K ++K +D +++SRG + + N L+ + R V E+
Sbjct: 338 YNPLLHAFCKQKKMDKAMAFLD---LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH 394
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
++ KD P + ++N ++ G + G ++ ++ EM G +P
Sbjct: 395 QL------------KDKG----CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQP 438
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D +YS + A C E R+ +A + + +++D + + V YN II G C+ E A + F
Sbjct: 439 DIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLF 498
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
M +G + T+ L+ G G + A + +++C +G E
Sbjct: 499 AYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGEE 542
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 208/481 (43%), Gaps = 46/481 (9%)
Query: 12 SVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTP 71
S S +P+ ++ + P ++ + VVS HR +L ++P
Sbjct: 65 SESDVEPRFTVVPGAAQEGLAPGVSEAAERVCRVVSAQPEHRIAP----VLDALGVTVSP 120
Query: 72 TQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVA 131
+++ L N LAL FF + + + ++S + +I L + +
Sbjct: 121 QLVAEVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIK------------ 168
Query: 132 LRSPENDPKLKLFEVLVKTYRECGS--APFVFDLLIKCCLEVKNIEKIETCVDIVRMLMS 189
+ +L LV+ R C S + F ++++ K++ V+ + S
Sbjct: 169 --------QFRLVWSLVEAMR-CRSCLSKDTFKIIVR---RYARARKVKEAVETFEKMSS 216
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
GL +S N LI +S+ K V + I++E+ KR R P++ T
Sbjct: 217 FGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEM---------------KRKGRFIPDLKT 261
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ LM G+ E ++ V+ EM G +PD +Y +L++ FC+ + EA K++ EM
Sbjct: 262 YTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEME 321
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ Y +I G + + A ++F+ SG T ++ YCRA +
Sbjct: 322 ESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFH 381
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + ++M + G P T ++++ L ++ EA ++ + R+ + G P +Y +
Sbjct: 382 HAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQ-RMERDGCEPELNTYTMM 440
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ C +++ ALKV +M KG P + ++SA I+G E +E A + +EM + +
Sbjct: 441 VGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGI 500
Query: 490 R 490
R
Sbjct: 501 R 501
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 114/245 (46%), Gaps = 21/245 (8%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
+I +S + D +K+F + ++ C +P V+ +LI + ++E+++ + ++
Sbjct: 300 LISAFCKSGKCDEAIKVFHEMEES--GCMPSPHVYCMLIN---GLGSMERLDEALKYFQL 354
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
G ++V TCNA+I R E + +D +GIG PN
Sbjct: 355 SKESGFPMEVPTCNAVIGAYCRA------LEFHHAFKMVDEMRKSGIG----------PN 398
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
T++ ++ + E+ +++ M R GCEP+ +Y++++ +FC R+ A K+W+
Sbjct: 399 TRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWK 458
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+M++K V + ++ +I G C + A +F+EM G+ F +L G
Sbjct: 459 QMKEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGG 518
Query: 367 DVDSA 371
+ A
Sbjct: 519 RITLA 523
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T NA++ + R F + EM + G P+ +Y +++ + ++ EA L++
Sbjct: 364 VPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQ 423
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M E ++ Y ++G FC + A + +++M GV F L+NG C
Sbjct: 424 RMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFEN 483
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
++ A + + +M KG P G L L + R+ A ++ +
Sbjct: 484 RLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQ 528
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
T ++++ R+V EA++ + ++ FGL Y +LI L + ++++A + E
Sbjct: 190 TFKIIVRRYARARKVKEAVETFE-KMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKE 248
Query: 449 MVGKG-FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
M KG F P L+ Y+ ++G+ E ++ M + +EM + ++ +
Sbjct: 249 MKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPD 293
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 181/403 (44%), Gaps = 49/403 (12%)
Query: 107 SYATIIHILSRARLIGPARDVIRV--ALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLL 164
+Y ++H LS+A G RD ++V + S + P V+V++
Sbjct: 151 TYTKLVHGLSKA---GRLRDAVQVLQEMVSARHVPDNTTLTVVVQSL------------- 194
Query: 165 IKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI-----------------WEVS 207
CL ++++ ++V ++ RG++ T +AL+ EV+
Sbjct: 195 ---CLG----DRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVT 247
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRV---VRVRPNVHTFNALMVGFYREGAFE 264
R +G Y V +D AG +D + + P T+N+L+ G+ R G +
Sbjct: 248 R-RGFTPDIVTYSTV--IDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMD 304
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+ + +M C PD +Y+ LM+ FC+ R+ +A +L+++M + DVV + +++
Sbjct: 305 EAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLV 364
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G C G M A E E+ G + T+ +V+GYC++ V A + D +GF
Sbjct: 365 DGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFV 424
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS-YMFLIKGLCEEGKMEEAL 443
P T +L+ C R +AL L + G PT + Y ++ LC +G+ ++A+
Sbjct: 425 PNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAV 484
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ EM+ +G+ P+ ++ + K + A L +EM +
Sbjct: 485 QFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIK 527
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 211/496 (42%), Gaps = 53/496 (10%)
Query: 34 PSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS-----GLTP--TQFSQIALGLKNNPH 86
PSD S T +L + ++ HL L GL+P + + I L +
Sbjct: 7 PSDSS-----TFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARD 61
Query: 87 LALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEV 146
F + L + ++Y +IH L +ARL+ A ++ + ++S +P L V
Sbjct: 62 TTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLL-LDMKSRGMNPGTLLHNV 120
Query: 147 LV-------------KTYRECGSA-PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGL 192
++ YR+ A P F K + ++ V +++ ++S
Sbjct: 121 VIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARH 180
Query: 193 SVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATA----------------GIG 234
+T ++ + G V E+ E+ G+ ++A +
Sbjct: 181 VPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVA 240
Query: 235 KDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+ V R P++ T++ ++ G + G D++ EM+ C P +Y+ L+ +
Sbjct: 241 LLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGY 297
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C M EA +L +M D N DV+ Y T++ FC++G + A E F++M + +
Sbjct: 298 CRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDV 357
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VTF LV+G C G ++ A+ + ++ R+G P T ++ C +V +A +++ A
Sbjct: 358 VTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELV-A 416
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG--FEPSLEIYSAFIDGYMK 470
G P +Y L+ G C G+ ++AL+ ++ +G S+ +Y+ +D +
Sbjct: 417 DFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCR 476
Query: 471 EGNVEMATMLRKEMFE 486
+G + A +EM +
Sbjct: 477 DGRTDDAVQFYEEMIQ 492
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 119/251 (47%), Gaps = 6/251 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P N ++ G R G V+ +M PD +Y+ L+ + R+R+A
Sbjct: 111 MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKAGRLRDAV 169
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ +EM D ++ C + A E EM G+ ++++T+ LV+G
Sbjct: 170 QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 229
Query: 363 CRAGDVDSAI-LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ +D A+ L+ ++ R+GF P+ T +I LC R+ +A+DI + + P
Sbjct: 230 CKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE----EMSCAP 285
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
T +Y LI G C G M+EA+++ +MV P + Y+ + + K G ++ A L
Sbjct: 286 TAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELF 345
Query: 482 KEMFENQVRQE 492
++M N++ +
Sbjct: 346 QQMVANKLSPD 356
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 4/243 (1%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+ L+ + ++ + ++M G P ++V++ C R+R A ++
Sbjct: 79 NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVY 138
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M D + D + Y ++ G + G + A + +EM + + T +V C
Sbjct: 139 RQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLG 197
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
VD A + +M +G T L+ LC R+ EA+ +L V + G P +
Sbjct: 198 DRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVT 257
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I GLC+ G++ +A+ + EM P+ Y++ I GY + G+++ A L +M
Sbjct: 258 YSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMV 314
Query: 486 ENQ 488
++
Sbjct: 315 DDN 317
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 37/194 (19%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V TF +L+ G EG E ++ E+ R GC P Y+Y+ ++ +C+ ++R+A
Sbjct: 352 KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKA 411
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA------------------------- 336
E+L + R + + V YN ++ G C G +A
Sbjct: 412 EELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIIL 471
Query: 337 ------------EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
+F+ EM G ++ TF +V C+A A + +M + G
Sbjct: 472 DALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHT 531
Query: 385 PEGSTIEVLIGELC 398
P T + ++ C
Sbjct: 532 PGPGTCDAVVSAYC 545
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 4/214 (1%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMRE-AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
M G D +++V++ ++R L +E+RD+ + D V NTI+ C+
Sbjct: 1 MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A F +M G + + T+ +L++ C+A +D A+ + DM +G P
Sbjct: 61 DTTTAMALFDKMAELGAVNHT-TYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
V+IG LC R+ AL + R + P +Y L+ GL + G++ +A++V EMV
Sbjct: 120 VVIGGLCRAGRLRHALGVY--RQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVS 177
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
P + + V+ A L +EM
Sbjct: 178 ARHVPDNTTLTVVVQSLCLGDRVDDARELVEEML 211
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG--CEPDCYSYSVLMAVFCEERRMREAE 302
PN T+N L+ G R G ++ ++ G C Y++++ C + R +A
Sbjct: 425 PNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAV 484
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +EEM + + T++ C+ + +A E EM G T + +V+ Y
Sbjct: 485 QFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAY 544
Query: 363 CRAGDVDSA 371
CRAG + A
Sbjct: 545 CRAGMIQKA 553
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 211/479 (44%), Gaps = 37/479 (7%)
Query: 28 TSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHL 87
T S PP +A + L+ K W+ L + P + + + + NP L
Sbjct: 33 TGSPCPPRFD----VAVIADLI----EKQHWSKL-GFHVKDINPNELFRQLISSELNPDL 83
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
LR++++ SL ++H L+ A+ R + +R+ + +F +
Sbjct: 84 CLRYYTWLVKNRDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAI 143
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
C ++ + D+L+ L N + E + + G + +C L+ +
Sbjct: 144 SMCDNVCVNS-IIADMLV---LAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALL 199
Query: 208 RGKGVISGYEIYREV-----------FGLDSDATAGIGK-----DVKRVVRV---RPNVH 248
+ +Y+E+ F + +A GK DV ++V PNV
Sbjct: 200 KQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVV 259
Query: 249 TFNALMVGFYR---EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++N L+ G+ + G K + V EM P+ ++++L+ F ++ + + K++
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVF 319
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM D++V +V+ YN++I G C G++ A +M +GV+ + +T+ L+NG+C+
Sbjct: 320 KEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKN 379
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + A+ +++ + +G P +LI C ++ + LK + + G+ P +
Sbjct: 380 GMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGF-ALKEEMEREGIVPDVGT 438
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI GLC G +E A K+ ++ KG P L + ++GY G A ML KEM
Sbjct: 439 YNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEM 496
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 123/242 (50%), Gaps = 2/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN+ TFN L+ GF+++ V+ EM P+ +Y+ L+ C ++ EA
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAI 351
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ ++M V+ +++ Y+++I GFC+ G M A + F + G ++ + L++ Y
Sbjct: 352 GMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAY 411
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G +D + +M R+G P+ T LI LC + EA L ++ GL P
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI-EAAKKLFDQLTNKGL-PD 469
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ L++G C G+ +A + EM G +P Y+ + GY KEGN++ AT +R
Sbjct: 470 LVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRT 529
Query: 483 EM 484
+M
Sbjct: 530 QM 531
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 171/373 (45%), Gaps = 36/373 (9%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF--DLL 164
++ +I+ L + + ARDV+ ++ P + + L+ Y + G ++ D +
Sbjct: 225 TFNVVINALCKTGKMNKARDVME-DMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 165 IKCCLEVK---NIEKIETCVD-------------IVRMLMSRGLSVKVSTCNALIWEVSR 208
+K +E + N+ +D + + ++ + + V T N+LI
Sbjct: 284 LKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLI----- 338
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVED 268
G+ +G +I + D +AG V+PN+ T+++L+ GF + G ++ D
Sbjct: 339 -NGLCNGGKINEAIGMRDKMVSAG----------VQPNLITYHSLINGFCKNGMMKEALD 387
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
++ + G P Y++L+ +C+ ++ + L EEM + + DV YN +I G C
Sbjct: 388 MFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
G + A++ F ++ G+ VTF L+ GYC G+ A ++ +M + G +P
Sbjct: 448 RNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHL 506
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
T +++ C + + A ++ + L SY L++G ++GK+E+A + E
Sbjct: 507 TYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNE 566
Query: 449 MVGKGFEPSLEIY 461
M+ KG P+ Y
Sbjct: 567 MLEKGLVPNRITY 579
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 2/159 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V T+N L+ G R G E + ++ ++ G PD ++ +LM +C R+A
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAA 490
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG-VESSSVTFEHLVNG 361
L +EM ++ + YN ++ G+C+ G + A +M + + ++ L+ G
Sbjct: 491 MLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
Y + G ++ A ++ N+M KG P T E++ E+ DK
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDK 589
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
E F+ G G + S+++ + L+ + +Y +M R+ +P T V+I L
Sbjct: 174 EAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINAL 233
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE---EGKMEEALKVQAEMVGKGF 454
C ++ +A D+++ V +G P SY LI G C+ GKM +A V EMV
Sbjct: 234 CKTGKMNKARDVMEDMKV-YGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEV 292
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
P+L ++ IDG+ K+ N+ + + KEM + V
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDV 327
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 146/294 (49%), Gaps = 17/294 (5%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++S G + T N LI + + ++S E+ E+ ++ PN
Sbjct: 5 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM----------------QIKGCEPN 48
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T+ L+ F +EG E+ +V EM+ G + Y+ L++ C++ ++++A ++
Sbjct: 49 VITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFG 108
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+M K + D+ +N++I G C++ + A +++M L GV ++++T+ L++ + R G
Sbjct: 109 DMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRG 168
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
+ A+ + NDM +G + T LI LC + + L + + + K GL P S
Sbjct: 169 AMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK-GLNPNNISC 227
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
LI GLC G ++ AL+ +M+ +G P + Y++ I+G K G + A L
Sbjct: 228 NILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNL 281
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 122/244 (50%), Gaps = 1/244 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V P++ T+N L++G ++G ++ EM GCEP+ +Y++L+ FC+E R+ E
Sbjct: 8 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 67
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A + +EM K + + V YN +I C+ ++ A F +M G + TF L+
Sbjct: 68 ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 127
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ + A+ +Y DM +G T LI + + EAL ++ + + G
Sbjct: 128 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR-GCP 186
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+ +Y LIK LC G +E+ L + +M+ KG P+ + I+G + GN++ A
Sbjct: 187 LDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 246
Query: 481 RKEM 484
++M
Sbjct: 247 LRDM 250
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 115/232 (49%), Gaps = 1/232 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P++ TFN+L+ G + FE+ ++ +M G + +Y+ L+ F M+EA K
Sbjct: 116 KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALK 175
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +M + D + YN +I C G + + F +M G+ ++++ L+NG C
Sbjct: 176 LVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLC 235
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G++ A+ DM +G P+ T LI LC R EAL++ V+ G+ P
Sbjct: 236 RTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE-GICPDA 294
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+Y LI C+EG ++A + + V GF P+ + + ++KEG+ E
Sbjct: 295 ITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 106/212 (50%), Gaps = 1/212 (0%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M +GC PD ++Y+ L+ C++ + A +L EM+ K E +V+ Y +I FC+ G
Sbjct: 5 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A EM G+ ++V + L++ C+ V A+ ++ DM KG +P+ T
Sbjct: 65 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI LC + EAL + + +++ G+ +Y LI G M+EALK+ +M+ +
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLE-GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR 183
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G Y+ I + GN+E L ++M
Sbjct: 184 GCPLDDITYNGLIKALCRAGNIEKGLALFEDM 215
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E M D+ YNT+I G C+ G + A E EM + G E + +T+ L++ +C+
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G ++ A V ++M KG LI LC +V +AL++ K G P +
Sbjct: 63 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK-GCKPDIFT 121
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+ LI GLC+ K EEAL + +M+ +G + Y+ I +++ G ++ A L +M
Sbjct: 122 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 181
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 137/569 (24%), Positives = 233/569 (40%), Gaps = 103/569 (18%)
Query: 13 VSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPT 72
+ +P P P LL+ + P SH+ V+SL H + + LL+ R P+
Sbjct: 39 LPEPPPIPALLALY-----LPRLAASHH--PRVLSLAASHPGLASPDLLLAYRRHLSPPS 91
Query: 73 QFSQIALGLKNNP--HLALRFFSFTQ----------------HKSLCKHSLSSYA----- 109
+ L P HL SF L +LS+YA
Sbjct: 92 CLPSLVPLLPVLPYRHLLPLLLSFVPLDPLRHLHRHLLAHLPTSPLADAALSAYARLRLP 151
Query: 110 ----TIIHILSRARLIGP----ARDVIRVALRSPENDPK--LKLFEVLVKTYRECGSAPF 159
++H L R R + P A V+ RSP P+ L +F L++ +
Sbjct: 152 HLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNH--Y 209
Query: 160 VFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVI----- 213
F+LL+ C + + + T + + GLS T N L+ R KG++
Sbjct: 210 TFNLLVHTHCSKGTLADALAT----LSTMQGFGLSPDAVTYNTLLNAHCR-KGMLGEARA 264
Query: 214 -------SGYEIYREVFGLDSDATAGIG--KDVKRVVR------VRPNVHTFNALMVGFY 258
G + + A A +G K +VV P++ T+N L +G
Sbjct: 265 LLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLC 324
Query: 259 REGAFEKVEDVWVEMARLGCE-PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G ++ + EM RLG PD +Y+ L+ + R +A +L EEMRDK V+ +
Sbjct: 325 QAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTL 384
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
V +N ++ C+ G++ A ++ G+ +T+ L++ YC+AG+V A + ++
Sbjct: 385 VTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDE 444
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA------------------------- 412
M KG + + T+ ++ LC +R +A ++L +
Sbjct: 445 MVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504
Query: 413 ---------RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
++++ L P+ +Y LIKGLC +++EA+ E V KG P Y+
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNI 564
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQVRQE 492
I Y KEG++E A +M EN + +
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPD 593
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 139/308 (45%), Gaps = 18/308 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K+E + + + GL+ V T N LI + V + + E+ +GK
Sbjct: 399 KLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM----------VGK 448
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+K + T N ++ + +E E++ + G PD SY +MA + +E
Sbjct: 449 GLKM------DTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKE 502
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
A +LW++M ++ + + YNT+I G C + + A + E G+ T+
Sbjct: 503 YNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTY 562
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++ YC+ GD+++A +N M F+P+ T L+ LC ++ +AL + ++ V
Sbjct: 563 NIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVE 622
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K G +Y LI+ +C+ G ++ AL +M KG +P Y+ + + G E
Sbjct: 623 K-GKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSE 681
Query: 476 MA-TMLRK 482
A ML K
Sbjct: 682 EAHNMLHK 689
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 5/249 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P + T N ++ +EG E+ ++A G PD +Y+ L+ +C+ + +A
Sbjct: 380 VKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAF 439
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM K ++ D NT++ C++ AEE G V++ ++ Y
Sbjct: 440 TLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAY 499
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ + + A+ +++ M + P ST LI LC R+ EA+D L V K GL P
Sbjct: 500 FKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEK-GLVPD 558
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E +Y +I C+EG +E A + +MV F+P + + ++G G ++ A
Sbjct: 559 ETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKAL---- 614
Query: 483 EMFENQVRQ 491
++FE+ V +
Sbjct: 615 KLFESWVEK 623
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 122/265 (46%), Gaps = 37/265 (13%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P++ T+N L+ G R ++ D E G PD +Y++++ +C+E + A
Sbjct: 519 KLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENA 578
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ +M + + + DVV NT++ G C G++ +A + F G + +T+ L+
Sbjct: 579 FRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQS 638
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG--- 418
C+ GDVD+A+ ++DM KG +P+ T V++ L + R EA ++L ++ G
Sbjct: 639 MCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLH-KLADSGKLS 697
Query: 419 -------LFPTE--------------------------KSYMFLIKGLCEEGKMEEALKV 445
L P+ ++YM + GLC G+++EA V
Sbjct: 698 QSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAV 757
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMK 470
EM+ KG Y ++G +K
Sbjct: 758 LDEMMQKGMPVDCSTYITLMEGLIK 782
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/302 (18%), Positives = 115/302 (38%), Gaps = 59/302 (19%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKV 196
+P L+L++ +++ R+ + ++ LIK C +E+++ +D + + +GL
Sbjct: 506 EPALRLWDQMIE--RKLIPSISTYNTLIKGLC----RMERLKEAIDKLNEFVEKGLVPDE 559
Query: 197 STCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVG 256
+T N +I + + + + + ++ +P+V T N LM G
Sbjct: 560 TTYNIIIHAYCKEGDLENAFRFHNKMVE----------------NSFKPDVVTCNTLMNG 603
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
G +K ++ G + D +Y+ L+ C+ + A +++M K ++ D
Sbjct: 604 LCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPD 663
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV----------------------- 353
YN ++ E G A ++ SG S S
Sbjct: 664 AFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPE 723
Query: 354 -------------TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
T+ +NG C G + A V ++M +KG + ST L+ L +
Sbjct: 724 AESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKR 783
Query: 401 RR 402
++
Sbjct: 784 QK 785
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 120/243 (49%), Gaps = 1/243 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNVHT+ A++ G+ +E + E + M G P+ +Y+ L+ C+ A +
Sbjct: 362 KPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYE 421
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L + M + ++ YN II G C+ G + A ++ + G+++ VT+ L++ +C
Sbjct: 422 LMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHC 481
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R D + +++ +N M + GF P+ + LI C ++++ E+ + L V GL PT+
Sbjct: 482 RQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKES-ERLFEEAVSLGLIPTK 540
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
K+Y +I G C G A+K+ M G P Y A I G KE ++ A L
Sbjct: 541 KTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDA 600
Query: 484 MFE 486
M +
Sbjct: 601 MMD 603
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 117/248 (47%), Gaps = 4/248 (1%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+ T N ++ G E E+++VEM + G PDC S+ +++ C R+ EAEK
Sbjct: 188 STQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWL 247
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M ++ D II FC+ G + R +F +M G+ + + F L+NG C+
Sbjct: 248 NAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQ 307
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + A + +M R+G++P T LI LC K +A + V G P +
Sbjct: 308 GSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHT 367
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV----EMATMLR 481
Y +I G C+E K+ A + + M +G P+ Y+ IDG+ K GN E+ ++
Sbjct: 368 YTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMG 427
Query: 482 KEMFENQV 489
KE F +
Sbjct: 428 KEGFSPNI 435
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 119/244 (48%), Gaps = 4/244 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN++T+NA++ G ++G+ ++ + +++ G + D +Y++LM+V C + +
Sbjct: 433 PNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF 492
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M D+ +Y T+I FC +M +E F E G+ + T+ ++ GYCR
Sbjct: 493 FNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCR 552
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ A+ ++ M G P+ T LI LC + ++ +A ++ A + K GL P E
Sbjct: 553 YGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDK-GLSPCEV 611
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ + L C++ A+ V + + + + + + EG ++MA + ++
Sbjct: 612 TRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKL 668
Query: 485 FENQ 488
+ +
Sbjct: 669 LDKE 672
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 126/260 (48%), Gaps = 9/260 (3%)
Query: 229 ATAGIG-KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
ATA IG K+++R V +++ F G ++ ++ VEM G + +
Sbjct: 141 ATALIGNKNLERANEV------MQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNC 194
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
++ V + AE ++ EM + V D V++ ++ C +G + AE++ M G
Sbjct: 195 VLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERG 254
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ T +++ +C+ G V+ + + M G P LI LC + + +A
Sbjct: 255 FIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAF 314
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV-GKGFEPSLEIYSAFID 466
++L+ +V+ G P ++ LI GLC++G E+A ++ ++V G++P++ Y+A I+
Sbjct: 315 ELLE-EMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMIN 373
Query: 467 GYMKEGNVEMATMLRKEMFE 486
GY KE + A ML M E
Sbjct: 374 GYCKEDKLNRAEMLLSRMQE 393
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 1/247 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V F+ ++ +EG + ++ M + G EPD +Y+ LM C + M EA
Sbjct: 270 KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEA 329
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+++ M K DV++Y T+I G+C+I ++ +A F EM + T+ L+ G
Sbjct: 330 VKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYG 389
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C G + AI ++++M +G P+ T +L+ LC R + EA+ +LKA + L P
Sbjct: 390 LCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKA-IEASNLNP 448
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ Y +I G+C G++E A + + + KG PS+ Y+ I G K G + A L
Sbjct: 449 DIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLF 508
Query: 482 KEMFENQ 488
EM N
Sbjct: 509 MEMDGND 515
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 123/245 (50%), Gaps = 5/245 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+ +L+ ++ V + +M PD +S ++ C+E ++ EA
Sbjct: 236 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAH 295
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ + M + VE DVV Y T++ G C EM A + F M G +++ L+NGY
Sbjct: 296 EIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGY 355
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ +D A+ ++ +MCRK + P+ T L+ LC R+ +A+ + V + G P
Sbjct: 356 CKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVAR-GQMPD 414
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ LC+ +EEA+ + + P +++Y+ IDG + G +E A +
Sbjct: 415 LVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAA----R 470
Query: 483 EMFEN 487
++F N
Sbjct: 471 DLFSN 475
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 183/416 (43%), Gaps = 32/416 (7%)
Query: 91 FFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVA--------------LRSPE 136
F S + H + +LSS+ ++H+ ++ A+ + +A + S
Sbjct: 36 FHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFG 95
Query: 137 NDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKV 196
P + +L+ ++ F F +L K L++ + T ++R L G K+
Sbjct: 96 VPPNVYTLNILINSFCHLNRVGFAFSVLAKI-LKLGHQPDPTTFTTLIRGLCVEG---KI 151
Query: 197 STCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVR--------PNVH 248
L K + G++ +G + +G + +R P+V
Sbjct: 152 GEALHLF-----DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVV 206
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+ +++ ++ + +++ +M G PD ++Y+ L+ C + L +M
Sbjct: 207 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM 266
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + DVV ++T++ C+ G++ A E M GVE VT+ L++G+C ++
Sbjct: 267 VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM 326
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D A+ V++ M RKGF P+ + LI C ++ +A+ + + K P K+Y
Sbjct: 327 DEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK-EWIPDTKTYNT 385
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
L+ GLC G++++A+ + EMV +G P L YS +D K ++E A L K +
Sbjct: 386 LMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAI 441
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 114/248 (45%), Gaps = 1/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ F L+ + + V + +M G P+ Y+ ++L+ FC R+ A +
Sbjct: 63 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ + D + T+I G C G++ A F +M G + + VT+ L+NG C+
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ +AI + M + +P+ +I LC R+V EA ++ +++V G+ P
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF-SQMVGQGISPDIF 241
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L+ LC + + + +MV P + I+S +D KEG V A + M
Sbjct: 242 TYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM 301
Query: 485 FENQVRQE 492
+ V +
Sbjct: 302 IQRGVEPD 309
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N LM G G + ++ EM G PD +YS+L+ C+ R + EA L
Sbjct: 378 PDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMAL 437
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + N+ D+ YN II G C GE+ A + F + G+ S T+ +++G C+
Sbjct: 438 LKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCK 497
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
G ++ A ++ +M P+G T + A+ +L+ + +
Sbjct: 498 RGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLAR 549
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ +N ++ G R G E D++ ++ G P ++Y++++ C+ + EA
Sbjct: 446 LNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEAN 505
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
KL+ EM + D YNTI GF + E RA + EM G + S
Sbjct: 506 KLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 1/209 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N L+ GF +E E+ + +M GC PD +Y+ L+ C++ ++ A +L
Sbjct: 222 PNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVEL 281
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ K ++ YNT+I G ++G+ +A + EM G++ +T+ LV G R
Sbjct: 282 LNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSR 341
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G VD AI ++D+ G +P T ++ LC R+ A+D L A +V+ G PTE
Sbjct: 342 EGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFL-AYMVQRGCKPTEA 400
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
SY LI+GL EG +EAL++ E+ +G
Sbjct: 401 SYTILIEGLAYEGLAKEALELLNELCLRG 429
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN L+ R+G + DV +M + GC P+ SY+ L+ FC+E++M A +
Sbjct: 187 PSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEY 246
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M + D+V YNT++ C+ G++ A E ++ G +T+ +++G +
Sbjct: 247 LGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSK 306
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G D A + ++M KG +P+ T L+G L + +V EA+ V G+ P
Sbjct: 307 VGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEV-LGVKPNAI 365
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y ++ GLC+ K + A+ A MV +G +P+ Y+ I+G EG + A L E+
Sbjct: 366 TYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 1/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ +L+ GF + G K + + G PD +Y+VL++ C R +AEKL
Sbjct: 117 PDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKL 176
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M + VV +N +I C G + RA + +M G +S+++ L++G+C+
Sbjct: 177 LADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCK 236
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
++ AI M +G P+ T L+ LC +V A+++L K G P
Sbjct: 237 EKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSK-GCSPVLI 295
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y +I GL + GK ++A K+ EM KG +P + YS+ + G +EG V+ A
Sbjct: 296 TYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEA 348
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
R G E+ M G PD + L+ FC+ + R+A ++ E + D DV+
Sbjct: 96 RNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVI 155
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
YN +I G C G AE+ +M G S VTF L+N CR G + AI V M
Sbjct: 156 TYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKM 215
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+ G P + L+ C ++++ A++ L ++ G +P +Y L+ LC++GK
Sbjct: 216 PKHGCTPNSLSYNPLLHGFCKEKKMERAIEYL-GKMTSRGCYPDIVTYNTLLTALCKDGK 274
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ A+++ ++ KG P L Y+ IDG K G + A L EM
Sbjct: 275 VDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEM 320
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 126/295 (42%), Gaps = 39/295 (13%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C S+ ++ +I+ L R L+G A DV+ E PK C
Sbjct: 185 CSPSVVTFNILINFLCRKGLLGRAIDVL-------EKMPK-----------HGCTPNSLS 226
Query: 161 FD-LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
++ LL C E +K+E ++ + + SRG + T N L+ + + V + E+
Sbjct: 227 YNPLLHGFCKE----KKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELL 282
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
+ L S + P + T+N ++ G + G ++ + EM G +
Sbjct: 283 NQ---LSSKGCS-------------PVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLK 326
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +YS L+ E ++ EA K + ++ V+ + + YN I+ G C+ + RA +F
Sbjct: 327 PDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDF 386
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
M G + + ++ L+ G G A+ + N++C +G + S +V +
Sbjct: 387 LAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKKSSAEKVAV 441
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 135/246 (54%), Gaps = 1/246 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V F+AL+ F +EG + E++ EM + G PD +Y+ L+ FC+E ++ +A
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ + M K ++ +N +I G+C+ + E FR+M L GV + +VT+ L+ G
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C G ++ A ++ +M + P+ + ++L+ LCD +AL+I + ++ K +
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE-KIEKSKMEL 490
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y +I G+C K+++A + + KG +P ++ Y+ I G K+G++ A +L
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 482 KEMFEN 487
++M E+
Sbjct: 551 RKMEED 556
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 132/242 (54%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+ +L+ GF +E +K + M GC P+ ++++L+ +C+ + +
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ +M + V D V YNT+I GFCE+G++ A+E F+EM V V+++ L++G
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G+ + A+ ++ + + E + ++I +C+ +V +A D+ + +K G+ P
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPD 526
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
K+Y +I GLC++G + EA + +M G P+ Y+ I ++ EG+ + L +
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIE 586
Query: 483 EM 484
E+
Sbjct: 587 EI 588
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 124/245 (50%), Gaps = 5/245 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+++ + ++ ++ G ++G+ + +++ EM G + D Y+ L+ FC R +
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KL +M + + DVVA++ +I F + G++ AEE +EM G+ +VT+ L++G
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C+ +D A + + M KG P T +LI C + + L++ + ++ G+
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR-GVVA 420
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI+G CE GK+E A ++ EMV + P + Y +DG G E A
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL--- 477
Query: 482 KEMFE 486
E+FE
Sbjct: 478 -EIFE 481
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 124/250 (49%), Gaps = 3/250 (1%)
Query: 237 VKRVVRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
V R+V + +P + T NAL+ G G + M G +P+ +Y ++ V C+
Sbjct: 165 VDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK 224
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ A +L +M ++ ++ D V Y+ II G C+ G + A F EM + G ++ +
Sbjct: 225 SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ G+C AG D + DM ++ P+ LI + ++ EA ++ K +
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK-EM 343
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
++ G+ P +Y LI G C+E ++++A + MV KG P++ ++ I+GY K +
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403
Query: 475 EMATMLRKEM 484
+ L ++M
Sbjct: 404 DDGLELFRKM 413
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 135/288 (46%), Gaps = 9/288 (3%)
Query: 206 VSRGKGVISGYEIYRE-VFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
VS GKG +S E R + + D + +++ R R RP + F+ L R ++
Sbjct: 31 VSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRS-RPRPRLIDFSRLFSVVARTKQYD 89
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
V D+ +M G + Y+ S+++ C R++ A ++ E D V ++T+I
Sbjct: 90 LVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLI 149
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G C G ++ A E M G + + +T LVNG C G V A+L+ + M GF+
Sbjct: 150 NGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKA---RVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
P T ++ +C + A+++L+ R +K Y +I GLC++G ++
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV----KYSIIIDGLCKDGSLDN 265
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
A + EM KGF+ + IY+ I G+ G + L ++M + ++
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
++ +++S+G + T N LI + + G E++R++ ++ VV
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM-------------SLRGVV- 419
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ T+N L+ GF G E ++++ EM PD SY +L+ C+ +A
Sbjct: 420 --ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++E++ +E D+ YN II G C ++ A + F + L GV+ T+ ++ G
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ G + A L++ M G P G T +LI
Sbjct: 538 CKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 1/193 (0%)
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A L++EM ++ ++ + + + ++M L G+ + T ++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
N CR + A + + G+EP+ T LI LC + RV EAL+++ R+V+ G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD-RMVEMGH 173
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
PT + L+ GLC GK+ +A+ + MV GF+P+ Y + K G +A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 480 LRKEMFENQVRQE 492
L ++M E +++ +
Sbjct: 234 LLRKMEERKIKLD 246
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 197/478 (41%), Gaps = 78/478 (16%)
Query: 86 HLALRFFSFTQHKSLCKHSLSSYA---------TIIHILSRARLIGP----ARDVIRVAL 132
HL + +L +LS+YA ++H R + P A V+
Sbjct: 124 HLHRHLLASFPTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALA 183
Query: 133 RSPENDPKLKL--FEVLVKTYRECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMS 189
RSP P+ L F L+ + F+LL+ C + + + T + +
Sbjct: 184 RSPSTSPQASLDAFHSLIALRLHPNH--YTFNLLVHTHCSKGTLADALST----LSKMQG 237
Query: 190 RGLSVKVSTCNALIWEVSRGKGVIS------------GYEIYREVFGLDSDATAGIG--K 235
GLS T N L+ R KG++ G R + A A +G K
Sbjct: 238 FGLSPDAVTYNTLLNAHCR-KGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIK 296
Query: 236 DVKRVVRV------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVL 288
VV P++ T+N L G + G ++ + EM +LG PD +Y+ L
Sbjct: 297 QATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTL 356
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ + +R +A L EEMR+K V+ +V +N I+ G C G++ A M G+
Sbjct: 357 VDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGL 416
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+T+ L++ C+AG+V A ++ ++M R G + + T+ L+ LC ++R EA +
Sbjct: 417 TPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEE 476
Query: 409 ILKA----------------------------------RVVKFGLFPTEKSYMFLIKGLC 434
+L+A ++K L P+ +Y LIKGL
Sbjct: 477 LLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLS 536
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
GK+ EA+ E++ G P Y+ I Y KEG++E A +M EN + +
Sbjct: 537 TMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPD 594
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 160/360 (44%), Gaps = 33/360 (9%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLL-------IKCCLEVKNI--------EKIETCVDI 183
P + + LV +C + +LL +K L NI ++E +
Sbjct: 348 PDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGR 407
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRV 243
+ M+ GL+ V T N LI + V + + +D +G+ D
Sbjct: 408 LEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVL------MDEMVRSGLKMDT------ 455
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
T N L+ +E +E+ E++ + G PD SY +MA + +E + A
Sbjct: 456 ----FTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALC 511
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
LW+EM + + + YNT+I G +G++ A + E+ G+ T+ +++ YC
Sbjct: 512 LWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYC 571
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ GD++ A +N M F+P+ T L+ LC R+ +A+ + ++ V K G
Sbjct: 572 KEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEK-GKKVDV 630
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG-NVEMATMLRK 482
+Y LI+ LC++ ++ AL+ A+M +G +P + Y+ + + G +VE ML K
Sbjct: 631 ITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHK 690
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 37/269 (13%)
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
+KR ++ P++ T+N L+ G G + D E+ +G PD +Y++++ +C+E
Sbjct: 517 IKR--KLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEG 574
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ +A + +M + + + DVV NT++ G C G + +A + F G + +T+
Sbjct: 575 DLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYN 634
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL------ 410
L+ C+ DVD+A+ + DM +G +P+ T VL+ L + R EA +L
Sbjct: 635 TLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNES 694
Query: 411 --------------KARVVKFGLFP---------------TEKSYMFLIKGLCEEGKMEE 441
V+ G P ++SY IK LC G+++E
Sbjct: 695 GKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKE 754
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
A V EM+ KG Y ++G +K
Sbjct: 755 AKAVLDEMMQKGMSVDNSTYITLMEGLIK 783
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 118/249 (47%), Gaps = 5/249 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+ ++ T N ++ G REG E+ M G PD +Y+ L+ C+ + +A
Sbjct: 381 VKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAF 440
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM ++ D NT++ C+ AEE R G V++ ++ Y
Sbjct: 441 VLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAY 500
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ + A+ ++++M ++ P ST LI L ++ EA+D L +++ GL P
Sbjct: 501 FKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLN-ELMEMGLVPD 559
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ +Y +I C+EG +E+A + +MV F+P + + ++G G +E A
Sbjct: 560 DTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAM---- 615
Query: 483 EMFENQVRQ 491
++FE+ V +
Sbjct: 616 KLFESWVEK 624
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 127/494 (25%), Positives = 230/494 (46%), Gaps = 73/494 (14%)
Query: 21 QLLSQFS----TSSSTPPSDQSHNLIATVVSLLTHHRS---------KSRWNHLLSL--- 64
L+S F+ + TPP + ++ ++V + +H + K ++L++L
Sbjct: 42 NLVSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNIL 101
Query: 65 --CRS--GLTPTQFSQIALGLKN--NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRA 118
C S G P FS A LK +P++ T K LC SY T+I+ L +
Sbjct: 102 INCFSQLGQNPLSFSVFANILKKGYDPNVITLT---TLIKGLCLKV--SYGTLINGLCK- 155
Query: 119 RLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIE 178
+G AR +++ R D KL V++ ++ +I +VK + +
Sbjct: 156 --VGQARAALQLLRRV---DGKLVQPNVVM------------YNTIIDSMCKVKLVNE-- 196
Query: 179 TCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK 238
D+ ++S G+S V T +ALI SG+ I ++ DA K +
Sbjct: 197 -AFDLYSEMVSEGISPDVVTYSALI----------SGFFIVGKL----KDAIDLFNKMIL 241
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
++P+V+TFN L+ GF ++G ++ + V+ M + G +P+ +Y LM +C +++
Sbjct: 242 E--NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQV 299
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+A ++ M V D +YN +I GFC+I ++ A F++M + + VT+ L
Sbjct: 300 NKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSL 359
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARV- 414
++G C++G + A+ + ++M +G P+ T ++ LC +V +A+ + LK +V
Sbjct: 360 IDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVF 419
Query: 415 ----VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
VK G +Y +I+G C +G EAL + ++M G P + Y I K
Sbjct: 420 EDLFVK-GYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFK 478
Query: 471 EGNVEMATMLRKEM 484
+ +MA L +EM
Sbjct: 479 KDENDMAEKLLREM 492
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+P+ Y+ ++ C+ + + EA L+ EM + + DVV Y+ +I GF +G++ A +
Sbjct: 175 QPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAID 234
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F +M L ++ TF LV+G+C+ G + V+ M ++G +P T L+ C
Sbjct: 235 LFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYC 294
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
++V +A I + + G+ P +SY +I G C+ K++EA+ + +M K P++
Sbjct: 295 LVKQVNKANSIFNT-MAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNV 353
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
Y++ IDG K G + A L EM + V
Sbjct: 354 VTYTSLIDGLCKSGKISYALKLVDEMHDRGV 384
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 113/250 (45%), Gaps = 23/250 (9%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ N+ T N L+ F + G V+ + + G +P+ + + L+ C +
Sbjct: 91 IASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLK------- 143
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
V+Y T+I G C++G+ A + R + V+ + V + +++
Sbjct: 144 ---------------VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSM 188
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ V+ A +Y++M +G P+ T LI ++ +A+D+ +++ + P
Sbjct: 189 CKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILE-NIKPD 247
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ L+ G C++GKM+E V A M+ +G +P++ Y + +DGY V A +
Sbjct: 248 VYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFN 307
Query: 483 EMFENQVRQE 492
M + V +
Sbjct: 308 TMAQGGVNPD 317
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 20/201 (9%)
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
+ KN + + I+G +I A R+M L G+ S+ VT L+N + + G
Sbjct: 51 LHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQ 110
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK----------------RRVFEALDILK 411
+ V+ ++ +KG++P T+ LI LC K R + L +
Sbjct: 111 NPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVD 170
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
++V+ P Y +I +C+ + EA + +EMV +G P + YSA I G+
Sbjct: 171 GKLVQ----PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIV 226
Query: 472 GNVEMATMLRKEMFENQVRQE 492
G ++ A L +M ++ +
Sbjct: 227 GKLKDAIDLFNKMILENIKPD 247
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 128/327 (39%), Gaps = 45/327 (13%)
Query: 100 LCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPF 159
L + ++ Y TII + + +L+ A D+ + S P + + L+ + G
Sbjct: 173 LVQPNVVMYNTIIDSMCKVKLVNEAFDLYS-EMVSEGISPDVVTYSALISGFFIVGKLKD 231
Query: 160 VFDLLIKCCLE-------VKNIEKIETCVD--------IVRMLMSRGLSVKVSTCNALIW 204
DL K LE NI C D + M+M +G+ V T +L+
Sbjct: 232 AIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMD 291
Query: 205 EVSRGKGVISGYEIYREVF--GLDSDATA------GIGKDVKRV------------VRVR 244
K V I+ + G++ D + G K +K+V +
Sbjct: 292 GYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCK-IKKVDEAMNLFKKMHCKNII 350
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+ +L+ G + G + EM G PD +YS ++ C+ ++ +A L
Sbjct: 351 PNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 410
Query: 305 WEEMRDKNVEH--------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+++D+ E DV AY +I GFC G A +M +G + T+E
Sbjct: 411 LTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYE 470
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGF 383
++ + + D A + +M +G
Sbjct: 471 IIILSLFKKDENDMAEKLLREMIARGL 497
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 1/232 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ + PN +FN ++ + G ++ +V+ M C PD Y+Y LM C+E R+ E
Sbjct: 181 MNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L +EM+ + V YN +I G C+ G+++R + M L G + VT+ L++
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIH 300
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C G +D A+ + M P T LI L +RR + +L + + + G
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLIS-MEERGYR 359
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ Y LI GL +EGK EEA+ + +M KG P++ +YSA IDG +EG
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREG 411
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 120/245 (48%), Gaps = 4/245 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+ L+ G ++ + + M G + + YSVL++ +E + EA L
Sbjct: 325 PNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTL 384
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W++M +K ++V Y+ +I G C G+ A+E M SG + T+ L+ G+ +
Sbjct: 385 WKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFK 444
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + AI V+ +M G VLI LC RV EA+ ++ ++++ G+ P
Sbjct: 445 TGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAM-MVWSKMLTIGIKPDTV 503
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGK---GFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y +IKGLC G M+ ALK+ EM+ + +P + Y+ +DG + +V A L
Sbjct: 504 AYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLL 563
Query: 482 KEMFE 486
M +
Sbjct: 564 NCMLD 568
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 109/225 (48%), Gaps = 2/225 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
R N H ++ L+ G ++EG E+ +W +MA GC P+ YS ++ C E + EA++
Sbjct: 359 RLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKE 418
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ M +V Y++++ GF + G A + +REM +G + + L++G C
Sbjct: 419 ILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLC 478
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK--FGLFP 421
G V A++V++ M G +P+ +I LC + AL + + + P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+Y L+ GLC + + A+ + M+ +G +P + + F++
Sbjct: 539 DVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLN 583
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 5/253 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEK----VEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
R + +V +FN+++ EG + + + V + P+ S+++++ C+
Sbjct: 143 RCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGF 202
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A +++ M +K D Y T++ G C+ + A EM G S V +
Sbjct: 203 VDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++G C+ GD+ + ++M KG P T LI LC K ++ +A+ +L+ R+V
Sbjct: 263 LIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLE-RMVSS 321
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P + +Y LI GL ++ + + ++ M +G+ + IYS I G KEG E A
Sbjct: 322 KCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEA 381
Query: 478 TMLRKEMFENQVR 490
L K+M E R
Sbjct: 382 MTLWKKMAEKGCR 394
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 1/241 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N L+ G +G +K + M C P+ +Y L+ ++RR + +L
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARL 349
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M ++ + Y+ +I G + G+ A +++M G + V + +++G CR
Sbjct: 350 LISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCR 409
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A + N M G P T L+ EA+ + + + + G E
Sbjct: 410 EGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWR-EMDETGCSRNEF 468
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI GLC G+++EA+ V ++M+ G +P YS+ I G G+++ A L EM
Sbjct: 469 CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEM 528
Query: 485 F 485
Sbjct: 529 L 529
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 71/172 (41%), Gaps = 17/172 (9%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM---ARLGCEPDCYSYSVLMAVFCEER 296
+ ++P+ +++++ G G+ + ++ EM +PD +Y++L+ C ++
Sbjct: 495 TIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQK 554
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ A L M D+ + DV+ NT + E + F E
Sbjct: 555 DVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSF--------------LE 600
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
LV + V A + M K P+ ST +++ E+C +++ A++
Sbjct: 601 ELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKKINAAIN 652
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 122/244 (50%), Gaps = 1/244 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNV+T+ ++ G+ +E + E + + M G P+ +Y+ L+ C+ A +
Sbjct: 366 KPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYE 425
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L + M + ++ YN II G C+ G A + R SG+ + VT+ L++ +C
Sbjct: 426 LMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFC 485
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R D A+ +++ M + G +P+ T VLI C +++V E+ + + V GL PT+
Sbjct: 486 RQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFE-EAVGLGLLPTK 544
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++Y +I G C +G + A+K +M G +P Y A I G E ++ A L +
Sbjct: 545 ETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYET 604
Query: 484 MFEN 487
M +N
Sbjct: 605 MIDN 608
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 154/333 (46%), Gaps = 51/333 (15%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++ RG +V +TC +I S V + +++ + + PN
Sbjct: 254 MIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMG----------------LNPN 297
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ F++L+ G + G+ ++ ++ EM R G +P+ Y+++ L+ C++ +A +L+
Sbjct: 298 LINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFL 357
Query: 307 EM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++ R N + +V Y +I G+C+ ++ RAE M G+ ++ T+ L++G+C+A
Sbjct: 358 KLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKA 417
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK-------------- 411
G+ A + + M ++GF P T +I LC K R EA +L+
Sbjct: 418 GNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTY 477
Query: 412 --------------------ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+R+ K GL P +Y LI C + K+EE+ K+ E VG
Sbjct: 478 TILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVG 537
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G P+ E Y++ I GY ++G++ A +M
Sbjct: 538 LGLLPTKETYTSMICGYCRDGHISSAIKFFHKM 570
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 111/242 (45%), Gaps = 9/242 (3%)
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
AL +GF + E V+ EM PD SY +++ +C R+ + ++ ++M ++
Sbjct: 203 ALALGF-----VDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIER 257
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
D +I F E G + RA +F++ G+ + + F L+NG C+ G + A
Sbjct: 258 GYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQA 317
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
+ +M RKG++P T LI LC K +A + V P +Y +I
Sbjct: 318 FEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMIN 377
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV----EMATMLRKEMFEN 487
G C+E K+ A + M +G P+ Y+ IDG+ K GN E+ ++ KE F
Sbjct: 378 GYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTP 437
Query: 488 QV 489
+
Sbjct: 438 NI 439
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 149/313 (47%), Gaps = 19/313 (6%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
I K++ V++V + + GL +K N +I +V+ G + E +VF D
Sbjct: 171 IGKLKEAVNMVIEMQNHGLVLKARILNFVI-DVALALGFVDYAE---KVFDEMLDRA--- 223
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
V P+ ++ ++VG+ R G V+ +M G D + +++++ F
Sbjct: 224 ---------VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFS 274
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
E+ + A +++ + +++ ++++I G C+IG + +A E EM G + +
Sbjct: 275 EKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVY 334
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRK-GFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
T L++G C+ G + A ++ + R ++P T +I C + ++ A ++L
Sbjct: 335 THTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRA-EMLLI 393
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
R+ + GL P +Y LI G C+ G A ++ M +GF P++ Y+A IDG K+G
Sbjct: 394 RMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKG 453
Query: 473 NV-EMATMLRKEM 484
E +LR+ +
Sbjct: 454 RFPEAYKLLRRGL 466
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 103/199 (51%), Gaps = 1/199 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+NA++ G ++G F + + + G D +Y++L++ FC + ++A +
Sbjct: 437 PNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAI 496
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M ++ D+ YN +I FC ++ +E+ F E G+ + T+ ++ GYCR
Sbjct: 497 FSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCR 556
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + SAI ++ M G +P+ T LI LC++ ++ EA + + ++ GL P E
Sbjct: 557 DGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYET-MIDNGLSPCEV 615
Query: 425 SYMFLIKGLCEEGKMEEAL 443
+ + L C++G A+
Sbjct: 616 TRVTLAYEYCKQGDSATAM 634
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 123/258 (47%), Gaps = 20/258 (7%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
+++ ++ G + + T NA+I + + Y++ R GL S G +V
Sbjct: 425 ELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRR--GLKS------GLHADKV- 475
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
T+ L+ F R+ ++ ++ M ++G +PD ++Y+VL+A FC ++++ E+
Sbjct: 476 -------TYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEES 528
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
EKL+EE + Y ++I G+C G ++ A +FF +M G + S+T+ L++G
Sbjct: 529 EKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISG 588
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C +D A +Y M G P T L E C + A+ IL+ K +
Sbjct: 589 LCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWI-- 646
Query: 422 TEKSYMFLIKGLCEEGKM 439
++ LI+ LC E K+
Sbjct: 647 --RTVNTLIRKLCSEKKV 662
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 1/186 (0%)
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
F E +++EA + EM++ + N +I +G + AE+ F EM V
Sbjct: 168 FSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPD 227
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
S +++ +V GYCR G + DM +G+ + +T ++I +K V A K
Sbjct: 228 STSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFK 287
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ V+ GL P ++ LI GLC+ G +++A ++ EMV KG++P++ ++A IDG K+
Sbjct: 288 -KWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKK 346
Query: 472 GNVEMA 477
G E A
Sbjct: 347 GWTEKA 352
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 134/291 (46%), Gaps = 35/291 (12%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+KR + P+V T+N L+ G+ R G E+ EM GC+PD +Y++LM +
Sbjct: 397 DLKRA-GLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKV 455
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R + + ++EM K ++ D AYNT I +G + A + M G+ S +VT+
Sbjct: 456 RNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTY 515
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
++G C++G++ A +++ M G +P+ T LI C++ R+ EA DI +V
Sbjct: 516 NIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLV 575
Query: 416 K-------------------------FGLF---------PTEKSYMFLIKGLCEEGKMEE 441
+G F P E +Y LI LC G+
Sbjct: 576 SGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNL 635
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
A + EM+ +G P+ Y+ IDG KEGN E A L EM ++ + +
Sbjct: 636 AYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPD 686
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 160/375 (42%), Gaps = 56/375 (14%)
Query: 154 CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVI 213
C + ++++I +EK VD RM MS+ S T N LI
Sbjct: 264 CLPSDVTYNVVINGLARKGELEKAAQLVD--RMRMSKKASA--FTFNPLI---------- 309
Query: 214 SGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
+GY F S AG + + P V T+N ++ G +R G E +VEM
Sbjct: 310 TGY------FARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEM 363
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
+G PD +Y+ L+ +C+ ++EA L+ +++ + V+ YN ++ G+C +G++
Sbjct: 364 RAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDL 423
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE------- 386
A F +EM G + T+ L+NG + ++ +++M KG +P+
Sbjct: 424 EEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTR 483
Query: 387 -------GSTIE---------------------VLIGELCDKRRVFEALDILKARVVKFG 418
GST E + + LC + +A +L ++V G
Sbjct: 484 ISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAY-VLWMKMVSDG 542
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
L P +Y LI CE G++ EA + M+ G PS Y+ FI Y + GN+ A
Sbjct: 543 LQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAY 602
Query: 479 MLRKEMFENQVRQED 493
++M E VR +
Sbjct: 603 GWFQKMLEEGVRPNE 617
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 37/269 (13%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY-------------------- 283
+P+V T+ LM G + V + + EM G +PDC+
Sbjct: 439 QPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQ 498
Query: 284 ---------------SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
+Y++ + C+ +++A LW +M ++ D + Y +I C
Sbjct: 499 LTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHC 558
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
E G + A + F M +SG+ S+VT+ ++ YCR G++ SA + M +G P
Sbjct: 559 ERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEV 618
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
T VLI LC R A +++ GL P + +Y LI G C+EG EEA+++ +E
Sbjct: 619 TYNVLIHALCRMGRTNLAYQHFH-EMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSE 677
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
M G P ++A G+ EG + A
Sbjct: 678 MHQHGIHPDHCTHNALFKGF-DEGQSKHA 705
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 119/247 (48%), Gaps = 4/247 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P + N ++ E ++ + V+ EM +LG EP +Y+ L+ F E R+ +A
Sbjct: 192 VPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAA 251
Query: 303 KLWEEM--RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
KL EM R V YN +I G GE+ +A + M +S ++S+ TF L+
Sbjct: 252 KLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KASAFTFNPLIT 310
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
GY G V+ A + +M +G P T +I + V EA + + GL
Sbjct: 311 GYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNV-EAARMKFVEMRAMGLL 369
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y LI G C+ G ++EAL + ++ G PS+ Y+ +DGY + G++E A
Sbjct: 370 PDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRF 429
Query: 481 RKEMFEN 487
++EM E
Sbjct: 430 KQEMVEQ 436
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VRPN T+N L+ R G + EM G P+ Y+Y++L+ C+E EA
Sbjct: 613 VRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAI 672
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+L+ EM + D +N + GF E
Sbjct: 673 RLYSEMHQHGIHPDHCTHNALFKGFDE 699
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G+ P K +++ L +E + ++ V AEM+ G EPS+ Y+ +D + +EG V+ A
Sbjct: 191 GVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQA 250
Query: 478 TMLRKEM 484
L +EM
Sbjct: 251 AKLLREM 257
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 153/324 (47%), Gaps = 22/324 (6%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV------------------ 222
+ ++RM+ R V +A+I + + K V Y++Y E+
Sbjct: 135 IKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICA 194
Query: 223 FGLDSDATAGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
F L + +++ + P+V+TF+ L+ +EG + + ++ M ++G P+
Sbjct: 195 FCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPN 252
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
YSY++++ C+ +R+ EA L EM KN+ D V YN++I G C+ G + A
Sbjct: 253 VYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMN 312
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM G + VT+ L++ C+ ++D A ++ M +G +P T LI LC
Sbjct: 313 EMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGG 372
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
R+ A ++ + +VK G +Y +I GLC+EG +EAL ++++M G P+ +
Sbjct: 373 RLKNAQELFQHLLVK-GCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTF 431
Query: 462 SAFIDGYMKEGNVEMATMLRKEMF 485
I ++ + A L EM
Sbjct: 432 EIIIRSLFEKDENDKAEKLLHEMI 455
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 11/244 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+ LM G +G +K+ ++ + + SY L+ C+ R A KL
Sbjct: 78 PNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKL 137
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ D++ +VV Y+ II G C+ + A + + EM + + +T+ L+ +C
Sbjct: 138 LRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCL 197
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC----DKRRVFEALDILKARVVKFGLF 420
AG + A + ++M K P+ T +LI LC + +++F A+ V+ G+
Sbjct: 198 AGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAKQIFHAM-------VQMGVN 250
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P SY +I GLC+ +++EA+ + EM+ K P Y++ IDG K G + A L
Sbjct: 251 PNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNL 310
Query: 481 RKEM 484
EM
Sbjct: 311 MNEM 314
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 139/322 (43%), Gaps = 30/322 (9%)
Query: 108 YATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKC 167
Y+ II L + +L+ A D+ + + E P + + L+ + G F LL +
Sbjct: 153 YSAIIDGLCKDKLVNEAYDLYS-EMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEM 211
Query: 168 CLEVKN--IEKIETCVD-----------IVRMLMSRGLSVKVSTCNALIWEVSRGKGVIS 214
L+ N + +D I ++ G++ V + N +I + + K V
Sbjct: 212 ILKNINPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDE 271
Query: 215 GYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
+ RE+ K +V P+ T+N+L+ G + G ++ EM
Sbjct: 272 AMNLLREMLH-------------KNMV---PDTVTYNSLIDGLCKSGRITSALNLMNEMH 315
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
G D +Y+ L+ C+ + + +A L+ +M+++ ++ + Y +I G C+ G +
Sbjct: 316 HRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLK 375
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
A+E F+ + + G T+ +++G C+ G D A+ + + M G P T E++I
Sbjct: 376 NAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIII 435
Query: 395 GELCDKRRVFEALDILKARVVK 416
L +K +A +L + K
Sbjct: 436 RSLFEKDENDKAEKLLHEMIAK 457
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 7/236 (2%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
+VR + FN ++ + + V + +M G E + + S+L+ FC +M
Sbjct: 3 LVRHTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMA 62
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+ L ++ + + + T++ G C GE+ + F ++ +++ V++ L+
Sbjct: 63 FSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLL 122
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVK 416
NG C+ G+ AI + + + P +I LC + V EA D+ + AR +
Sbjct: 123 NGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREI- 181
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
FP +Y LI C G++ A + EM+ K P + +S ID KEG
Sbjct: 182 ---FPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG 234
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 89/192 (46%), Gaps = 7/192 (3%)
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L ++M K +E ++V + +I FC +G+MA + ++ G +++T+ L+ G C
Sbjct: 32 LSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLC 91
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLF 420
G+V + ++ + + F+ + L+ LC + R + L +++ R +
Sbjct: 92 LKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTR---- 147
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P Y +I GLC++ + EA + +EM + P++ Y+ I + G + A L
Sbjct: 148 PNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSL 207
Query: 481 RKEMFENQVRQE 492
EM + +
Sbjct: 208 LHEMILKNINPD 219
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
++++ ++++R ++ + + T N+LI + + + S + E+
Sbjct: 267 KRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHH---------- 316
Query: 235 KDVKRVVRVRP-NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
R +P +V T+ +L+ + +K ++++M G +P Y+Y+ L+ C
Sbjct: 317 -------RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLC 369
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ R++ A++L++ + K DV Y +I G C+ G A +M +G ++V
Sbjct: 370 KGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAV 429
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
TFE ++ + D A + ++M KG
Sbjct: 430 TFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 116/233 (49%), Gaps = 1/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P V ++NA+M G F++ V++ M G PD YS+++ M FC R A +L
Sbjct: 109 PTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRL 168
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M + E +VVAY T++GGF E E F +M SGV TF L++ C+
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCK 228
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GDV + + + ++G P T I LC K + A+ ++ R++ G P
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMV-GRLIDQGPKPDVV 287
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y +LI GLC+ K +EA ++V +G EP Y+ I GY K G V++A
Sbjct: 288 TYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLA 340
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 123/247 (49%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN+ T+N + G ++G + + + G +PD +Y+ L+ C+ + +EAE
Sbjct: 247 VLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAE 306
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ ++ +E D YNT+I G+C+ G + AE +G T+ L++G
Sbjct: 307 VYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGL 366
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G+ + A+ ++N+ KG +P LI L ++ + EA L + + + GL P
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQ-LASEMSEKGLIPE 425
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+++ L+ GLC+ G + +A + M+ KG+ P + ++ I GY + +E A +
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 483 EMFENQV 489
M +N V
Sbjct: 486 VMMDNGV 492
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 190/447 (42%), Gaps = 44/447 (9%)
Query: 68 GLTPTQFSQIALGLKN-----NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIG 122
G+TP +S + +K+ PH ALR + + C+ ++ +Y T++
Sbjct: 141 GITPDVYS-FTIRMKSFCRTSRPHAALRLLNNMSSQG-CEMNVVAYCTVVGGFYEENFKD 198
Query: 123 PARDVIRVALRSPEN---DPKLKLFEVLVK--TYREC----------GSAP--FVFDLLI 165
++ L S + KL VL K +EC G P F ++ I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFI 258
Query: 166 KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGL 225
+ + +++ V +V L+ +G V T N LI+ + +
Sbjct: 259 QGLCQKG---ELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKF------------- 302
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
+A +GK V + P+ T+N L+ G+ + G + E + V G PD ++Y
Sbjct: 303 -QEAEVYLGKLVNE--GLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTY 359
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
L+ C E A L+ E K ++ +V+ YNT+I G G + A + EM
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSE 419
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G+ TF LVNG C+ G V A + M KG+ P+ T +LI + ++
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
AL+IL ++ G+ P +Y L+ GLC+ K E+ ++ MV KG P+L ++ +
Sbjct: 480 ALEILDV-MMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 466 DGYMKEGNVEMATMLRKEMFENQVRQE 492
+ + ++ A L +EM V +
Sbjct: 539 ESLCRYHKLDKALGLLEEMKNKSVNPD 565
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 181/403 (44%), Gaps = 48/403 (11%)
Query: 61 LLSLCRSGLTPTQFSQIAL--GL--KNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILS 116
L++ +G P +F+ +L GL + + AL F+ K + K ++ Y T+I LS
Sbjct: 344 LVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGI-KPNVILYNTLIKGLS 402
Query: 117 RARLIGPARDVIRVALRSPEND--PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNI 174
LI A ++A E P+++ F +LV + G
Sbjct: 403 NQGLILEAA---QLASEMSEKGLIPEVQTFNILVNGLCKMGC------------------ 441
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
+ +V++++S+G + T N LI S + + EI
Sbjct: 442 --VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL--------------- 484
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
DV V P+V+T+N+L+ G + +E V + + M GC P+ +++++L+ C
Sbjct: 485 -DVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-GLSGVESSSV 353
++ +A L EEM++K+V D V + T+I GFC+ G++ A FR+M + V S+
Sbjct: 544 YHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTP 603
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ +++ + +V A ++ +M + P+G T +++ C V L
Sbjct: 604 TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFL-LE 662
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+++ G P+ + +I LC E ++ EA + MV KG P
Sbjct: 663 MMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 109/243 (44%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P V TFN L+ G + G + + M G PD +++++L+ + + +M A ++
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M D V+ DV YN+++ G C+ + E ++ M G + TF L+ CR
Sbjct: 484 LDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+D A+ + +M K P+ T LI C + A + + + + +
Sbjct: 544 YHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTP 603
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I E+ + A K+ EMV + P Y +DG+ K GNV++ EM
Sbjct: 604 TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEM 663
Query: 485 FEN 487
EN
Sbjct: 664 MEN 666
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 14/229 (6%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ TFN L+ G+ + E ++ M G +PD Y+Y+ L+ C+ + + +
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMET 518
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ M +K ++ +N ++ C ++ +A EM V +VTF L++G+C+
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Query: 365 AGDVDSAILVYNDM-------CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
GD+D A ++ M C T ++I +K V A + + V +
Sbjct: 579 NGDLDGAYTLFRKMEEVYMVSCST------PTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L P +Y ++ G C+ G ++ K EM+ GF PSL I+
Sbjct: 633 -LGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVIN 680
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 165/344 (47%), Gaps = 25/344 (7%)
Query: 146 VLVKTYRECGSAPFVFDLLIKCCLEV-KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
++ K +ECG AP V C + + + K+ +++ +M+ S G+ + T + LI
Sbjct: 434 IVFKRLKECGFAPSVISY--GCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLIN 491
Query: 205 EVSRGKGVISGYEIYREVF--GLDSD---------ATAGIGKDVKRVV---------RVR 244
+ K + + ++ +V GL D A G+G ++ R + R R
Sbjct: 492 GFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMG-NMDRAIHMVKEMQKKRHR 550
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P TF ++ GF R G + +++ M R GC P ++++ L+ E+R+M +A ++
Sbjct: 551 PTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEI 610
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EM V D Y TI+ G+ +G+ +A E+F ++ G+E T+E L+ C+
Sbjct: 611 LDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCK 670
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G + SA+ V +M + +LI + V+EA D+++ ++ + G+ P
Sbjct: 671 SGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQ-QMKQEGVQPDIH 729
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+Y I C+ G M A K EM G +P+++ Y+ I G+
Sbjct: 730 TYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGW 773
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 132/283 (46%), Gaps = 36/283 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V ++ L+ + + G K +V M G + + +YS+L+ F + + A +
Sbjct: 446 PSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTV 505
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E++ ++ DVV YN II FC +G M RA +EM +S TF +++G+ R
Sbjct: 506 FEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFAR 565
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG++ A+ +++ M R G P T L+ L +KR++ +A++IL + G+ P E
Sbjct: 566 AGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALA-GVSPDEH 624
Query: 425 SYMF-----------------------------------LIKGLCEEGKMEEALKVQAEM 449
+Y L+K C+ G+M+ AL V EM
Sbjct: 625 TYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREM 684
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ + +Y+ IDG+ + G+V A L ++M + V+ +
Sbjct: 685 SAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPD 727
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 117/246 (47%), Gaps = 8/246 (3%)
Query: 252 ALMVGFY-REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
LMVG+Y R G + + M G P + Y+ L+ + R M EA +M++
Sbjct: 306 GLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMKE 365
Query: 311 KNVEHDVVAYNTIIGGFCEIG------EMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ VE +V Y+ ++GGF +IG M RAE REM G+++ + ++NGY
Sbjct: 366 EGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTM 425
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ + ++V+ + GF P + LI +V +AL++ K + G+ K
Sbjct: 426 IGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKM-MESAGIKHNMK 484
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G + A V +++ G +P + +Y+ I + GN++ A + KEM
Sbjct: 485 TYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEM 544
Query: 485 FENQVR 490
+ + R
Sbjct: 545 QKKRHR 550
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 120/250 (48%), Gaps = 11/250 (4%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ ++ +M G+ G EK V+ + G P SY L+ ++ + ++ +A ++ +
Sbjct: 413 IDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSK 472
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M ++H++ Y+ +I GF ++ + A F ++ G++ V + +++ +C G
Sbjct: 473 MMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMG 532
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLI---GELCDKRRVFEALDILKARVVKFGLFPTE 423
++D AI + +M +K P T +I + RR E D+++ + G PT
Sbjct: 533 NMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMR----RSGCIPTV 588
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV----EMATM 479
++ L+ GL E+ +ME+A+++ EM G P Y+ ++GY G+ E T
Sbjct: 589 HTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTK 648
Query: 480 LRKEMFENQV 489
LR E E V
Sbjct: 649 LRNEGLELDV 658
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 109/262 (41%), Gaps = 51/262 (19%)
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
++I M+ G V T NAL+ G++ ++ + V LD A AG
Sbjct: 572 ALEIFDMMRRSGCIPTVHTFNALVL------GLVEKRQMEKAVEILDEMALAG------- 618
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V P+ HT+ +M G+ G K + + ++ G E D ++Y L+ C+ RM+
Sbjct: 619 ---VSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQ 675
Query: 300 -----------------------------------EAEKLWEEMRDKNVEHDVVAYNTII 324
EA L ++M+ + V+ D+ Y + I
Sbjct: 676 SALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFI 735
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
C+ G+M RA + +EM GV+ + T+ L++G+ A + A+ + +M G +
Sbjct: 736 NACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLK 795
Query: 385 PEGSTIEVLIGELCDKRRVFEA 406
P+ + L+ L + V EA
Sbjct: 796 PDKAVYHCLMTSLLSRATVAEA 817
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 18/202 (8%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
L + GL + V T AL+ + + S + RE+ +++ R N
Sbjct: 649 LRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSA----------QNIPR------N 692
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+N L+ G+ R G + D+ +M + G +PD ++Y+ + C+ M A K +
Sbjct: 693 TFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQ 752
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
EM V+ +V Y T+I G+ +A F EM L+G++ + L+
Sbjct: 753 EMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSLLSRA 812
Query: 367 DVDSAILVYN--DMCRKGFEPE 386
V A + +CR+ E E
Sbjct: 813 TVAEAYIYSGILSICREMIESE 834
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 7/198 (3%)
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+P + +++ + M A + +E MR + + Y ++I + +M A
Sbjct: 299 KPARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALS 358
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDS------AILVYNDMCRKGFEPEGSTIEV 392
R+M GVE S VT+ +V G+ + G+ D A + +M +G +
Sbjct: 359 CVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHT 418
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
++ + L + K R+ + G P+ SY LI + GK+ +AL+V M
Sbjct: 419 MMNGYTMIGNEEKCLIVFK-RLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESA 477
Query: 453 GFEPSLEIYSAFIDGYMK 470
G + +++ YS I+G++K
Sbjct: 478 GIKHNMKTYSMLINGFLK 495
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
G++ R+ FE++ + G++P+ Y LI MEEAL +M +G
Sbjct: 316 GDMHRARQTFESMRVR-------GIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGV 368
Query: 455 EPSLEIYSAFIDGYMKEGNVEMA-TMLRKEMFENQVRQE 492
E SL YS + G+ K GN + + M R E ++ +E
Sbjct: 369 EMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEE 407
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 158/344 (45%), Gaps = 20/344 (5%)
Query: 135 PENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSV 194
P+ ++L+ + G+ P + ++ D++ L S GL +
Sbjct: 87 PDLRHLMRLYATAATLFVARGNLPMAHEAARAMVAAFAETNRLREATDMLLELRSHGLPL 146
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALM 254
V T N W + G + R+ F G+G VRP+ +F AL+
Sbjct: 147 VVETAN---WVLRVGLRQRHHFAHARQAFD-------GMG--------VRPDARSFRALV 188
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
+G +EG FE+ + + M R G D + +V++ FC + R R+ L+ M +
Sbjct: 189 LGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNP 248
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
+VV Y + G C+ G + +A EM G++ + T L++G C+ G + A +
Sbjct: 249 PNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRL 308
Query: 375 YNDMCR-KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ + + ++P T V+IG C + ++ A ++L R+V+ GL P +Y LI G
Sbjct: 309 FLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARA-EMLLGRMVEQGLAPNTNTYTTLIDGH 367
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
C G + A ++ +M +GF P++ Y+A I G+ K+G ++ A
Sbjct: 368 CRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQA 411
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 121/246 (49%), Gaps = 1/246 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNVHT+ ++ G+ +EG + E + M G P+ +Y+ L+ C A +
Sbjct: 319 KPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFE 378
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +M+ + ++ YN IIGGFC+ G++ +A + R G+ VT+ L+ +C
Sbjct: 379 LMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHC 438
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G + A+ ++N M P+ T +I C +R++ ++ + + + GL PT+
Sbjct: 439 KQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFD-KCLSIGLVPTK 497
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++Y +I G C GK ALKV MV G P Y A I G KE +E A L +
Sbjct: 498 QTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFET 557
Query: 484 MFENQV 489
M + +
Sbjct: 558 MLDKHM 563
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 24/308 (7%)
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR-GKGVISGYEIYRE 221
L++ CC E + E ++ + G S+ +TC ++ R G+ +R+
Sbjct: 187 LVLGCCQE----GRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGR--------FRD 234
Query: 222 VFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
V GL G+ V+ + PNV + A + G + G ++ V EM G +P+
Sbjct: 235 VPGL-------FGRMVE--MGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPN 285
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
Y+++ L+ C+ A +L+ ++ + + + +V Y +IGG+C+ G++ARAE
Sbjct: 286 VYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLL 345
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
M G+ ++ T+ L++G+CR G D A + N M +GF P T +IG C K
Sbjct: 346 GRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKK 405
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
++ +A +L+ + GL P + +Y LI C++G + AL + +M P ++
Sbjct: 406 GKIQQAYKVLRMATSQ-GLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDT 464
Query: 461 YSAFIDGY 468
Y+ I Y
Sbjct: 465 YTTIIAMY 472
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 101/199 (50%), Gaps = 1/199 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN++T+NA++ GF ++G ++ V G PD +Y++L+ C++ + A L
Sbjct: 390 PNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDL 449
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M + + D+ Y TII +C+ +M ++++ F + G+ + T+ ++ GYCR
Sbjct: 450 FNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCR 509
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G SA+ V+ M + G P+ T LI LC + R+ EA + + + K + P +
Sbjct: 510 VGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKH-MVPCDV 568
Query: 425 SYMFLIKGLCEEGKMEEAL 443
+ + L C K A+
Sbjct: 569 TCVTLAYEYCRRDKTTIAV 587
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 97/231 (41%), Gaps = 41/231 (17%)
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIG-GFCEIGEMARAEEFFREMGLSGVESSS 352
E R+REA + E+R + V N ++ G + A A + F MG V +
Sbjct: 125 ETNRLREATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGMG---VRPDA 181
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
+F LV G C+ G + A + M R+GF + +T V++ C + R F + L
Sbjct: 182 RSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGR-FRDVPGLFG 240
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG------------------- 453
R+V+ G P +Y + GLC+ G +++A V EMVGKG
Sbjct: 241 RMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIG 300
Query: 454 -----------------FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++P++ Y+ I GY KEG + A ML M E
Sbjct: 301 WTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQ 351
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 113/242 (46%), Gaps = 8/242 (3%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+ L+ ++G D++ +MA C PD +Y+ ++A++C++R+M ++++L
Sbjct: 425 PDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQL 484
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++ + Y ++I G+C +G+ A + F M G +T+ L++G C+
Sbjct: 485 FDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCK 544
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
++ A ++ M K P T L E C + + A+ L GL ++
Sbjct: 545 ESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLD------GLDKRQQ 598
Query: 425 SYM--FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ L++ L ++ A ++ K + Y++FI+ + +A+ + +
Sbjct: 599 AHAADALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEISE 658
Query: 483 EM 484
++
Sbjct: 659 KI 660
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 136/526 (25%), Positives = 219/526 (41%), Gaps = 76/526 (14%)
Query: 2 AVQILKHIIFSVSKPKPKPQLLSQFSTSS----STPPSDQSHNLIATVVSLLTHHRSKSR 57
++Q LK++ S P+ P LS S S P+ Q+H LL+ HR +
Sbjct: 83 SLQFLKYL--SAKAPQHHPHSLSSVFQGSLELASRHPNSQTH--------LLSLHRFRKS 132
Query: 58 WNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSR 117
+ L L TP S + L+N + F Q K + H L R
Sbjct: 133 THPTLPL-----TPKSASLLLQCLENARLVNDSLLLFNQLDPSSKS-----PQLCHGLLR 182
Query: 118 ARL-IGPARDVIRVALRSPENDPKLKL-----FEVLVKTYR---------------ECGS 156
L G A D + V P+ + + F LV++ R E G
Sbjct: 183 VLLKSGRAGDALHVLDEMPQANSGFSVTGEIVFGELVRSGRSFPDGEVVGLVAKLGERGV 242
Query: 157 APFVF---DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVI 213
P F L+ K C + KN +++ +M G +V ++CNAL+ + RG+ +
Sbjct: 243 FPDGFKLTQLVGKLCGDQKN----GVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIK 298
Query: 214 SGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
E+ E+ KR ++RP+V TF L+ + ++ V+ +
Sbjct: 299 RMNELLAEM--------------EKR--KIRPSVVTFGILVNHLCKARRIDEALQVFDRL 342
Query: 274 ------ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH-DVVAYNTIIGG 326
+G EPD ++ L+ C+ + + L EEM+ N+ + V YN +I G
Sbjct: 343 RGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDG 402
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
F + G RA E FR+M GV+ + +T LV+G C+ G V A+ +N+M KG +
Sbjct: 403 FFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGN 462
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
+T LI C + A+ + ++ G P Y LI GLC G+M +A V
Sbjct: 463 AATYTALISAFCGVNNINRAMQCFE-EMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVV 521
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+++ GF Y+ I G+ K+ +E L EM E V+ +
Sbjct: 522 SKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPD 567
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 163/412 (39%), Gaps = 41/412 (9%)
Query: 104 SLSSYATIIHILSRARLIGPARDVI-RVALRSPEN----DPKLKLFEVLVKTYRECGSAP 158
S+ ++ +++ L +AR I A V R+ + N +P + LF L+ + G
Sbjct: 315 SVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEE 374
Query: 159 FVFDLLIKCCLEVKNIEKIETCV------------------DIVRMLMSRGLSVKVSTCN 200
LL + +++ NI + T ++ R + G+ V T N
Sbjct: 375 DGLSLLEE--MKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLN 432
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
L+ + + V E + E+ G ++ N T+ AL+ F
Sbjct: 433 TLVDGLCKHGRVHRAVEFFNEMKGKG----------------LKGNAATYTALISAFCGV 476
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
+ + EM GC PD Y L++ C RM +A + +++ D Y
Sbjct: 477 NNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCY 536
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
N +I GFC+ ++ R E EM +GV+ ++T+ L++ + GD +A V M +
Sbjct: 537 NVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIK 596
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
+G P T +I C K+ V E + I + P Y LI LC ++
Sbjct: 597 EGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVD 656
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
A+ + +M K P+ Y+A + G + + A L M E R +
Sbjct: 657 RAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPD 708
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 20/207 (9%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDAT---------- 230
+V L G S+ S N LI + K + YE+ E+ G+ D
Sbjct: 520 VVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLG 579
Query: 231 -----AGIGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDC 282
A K ++++++ +RP+V T+ A++ + + ++ ++ EM P+
Sbjct: 580 KTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNT 639
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
Y++L+ C + A L E+M+ K V + YN I+ G + + +A E
Sbjct: 640 VIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDR 699
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVD 369
M +T E L G+++
Sbjct: 700 MVEEACRPDYITMEVLTEWLSAVGEIE 726
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 186/422 (44%), Gaps = 41/422 (9%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI 128
++P + +N LA RFF + + HS+ +Y ++I L++ R D++
Sbjct: 20 ISPEIAEPVLRRFENAGMLAYRFFEWASKQRNYVHSVRAYHSMIESLAKIRQYQMVWDLV 79
Query: 129 RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLM 188
A+R+ E ++ F ++++ Y +K+E V ++
Sbjct: 80 N-AMRNKE-ILNVEAFCIIMRKYARA--------------------QKVEEAVYTFNVME 117
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVH 248
+ V+ N L+ + + K V EI+ + KD + P+
Sbjct: 118 KYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNM------------KD-----QFVPDSK 160
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T++ L+ G+ R K +++ EM GC PD +YS+++ V C+ R+ EA ++ +EM
Sbjct: 161 TYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEM 220
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
N + Y+ ++ + + A F EM +GV + + L++ +C+A +
Sbjct: 221 DYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKM 280
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ V DM KG P T ++I L + EA I + R++K P SY
Sbjct: 281 KNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFR-RMIKV-CEPDVDSYTM 338
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+IK C +++ ALK+ M K F PS+ +S I+G + GN A +L +EM E
Sbjct: 339 IIKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKG 398
Query: 489 VR 490
+R
Sbjct: 399 IR 400
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 37/280 (13%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRS---PENDPKLKLFEVLVKT------------- 150
+Y+ +I RA + AR++ R + S P+ + +VL K
Sbjct: 161 TYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEM 220
Query: 151 -YRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG 209
Y C + F++ +L+ V+N +IE V + G+ V+ NALI +
Sbjct: 221 DYNNCKPSSFIYSVLVHT-YGVEN--RIEDAVSTFLEMERNGVMADVAAYNALISAFCKA 277
Query: 210 KGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDV 269
+ + Y + +++ D+K V PN T N ++ G ++ +
Sbjct: 278 NKMKNVYRVLKDM-------------DLKGV---NPNSRTCNIIINSLIGRGETDEAFKI 321
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+ M ++ CEPD SY++++ +FC + + A K+W+ M+ K + ++ +I G C+
Sbjct: 322 FRRMIKV-CEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQ 380
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
IG +A EM G+ S TF L + + G D
Sbjct: 381 IGNATQACVLLEEMIEKGIRPSGATFGRLRHLLIKEGRKD 420
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 142/270 (52%), Gaps = 12/270 (4%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
D+ + + + ++ + ++P+V ++A++ G +++G +++++EM G PD +Y
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
S ++ FC + EA++L +EM + + DVV ++ +I + G++ A++ +EM
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR-----------KGFEPEGSTIEVLI 394
SGV + VT L++G C +G + A+ ++ M + G EP+ T +LI
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
L ++ + EA + L + G+ P +Y +I GLC++ +++EA ++ M K F
Sbjct: 311 SGLINEGKFLEAEE-LYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P++ ++ I GY K G V+ L EM
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEM 399
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 126/232 (54%), Gaps = 9/232 (3%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG--LDSDATAGIGKDVKR 239
D+++ ++S G+ V TCN L+ + + E+++ + +D DAT
Sbjct: 243 DLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNG---- 298
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V P+V T+N L+ G EG F + E+++ EM G PD +YS ++ C++ R+
Sbjct: 299 ---VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLD 355
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
EA ++++ M K+ ++V +NT+I G+C+ G + E F EMG G+ ++++T+ L+
Sbjct: 356 EATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLI 415
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
G+ + G+++ ++ ++ +M G P+ TI ++ L K + AL +L+
Sbjct: 416 RGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLE 467
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 126/253 (49%), Gaps = 11/253 (4%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEERRMREA 301
++PN T+ ++ G + G ++ +M L +PD YS ++ ++ R +A
Sbjct: 112 LQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDA 171
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ L+ EM+DK + D+V Y+ +I GFC G+ + A+ +EM + + VTF L+N
Sbjct: 172 QNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINA 231
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF---- 417
+ GD++SA + +M G P T L+ LCD ++ +AL++ KA
Sbjct: 232 LVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDID 291
Query: 418 ------GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
G+ P ++Y LI GL EGK EA ++ EM +G P YS+ I+G K+
Sbjct: 292 ATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQ 351
Query: 472 GNVEMATMLRKEM 484
++ AT + M
Sbjct: 352 SRLDEATQMFDSM 364
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 119/256 (46%), Gaps = 12/256 (4%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V ++ P+V TF+ L+ +EG +D+ EM G P+ + + L+ C+ +++
Sbjct: 215 VRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLK 274
Query: 300 EAEKLWEEMRD-----------KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+A ++++ M+ VE DV YN +I G G+ AEE + EM G+
Sbjct: 275 DALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 334
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+VT+ ++NG C+ +D A +++ M K F P T LI C V + L+
Sbjct: 335 VPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLE 394
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+ + + G+ +Y+ LI+G + G + +L + EM+ G P + G
Sbjct: 395 LF-CEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL 453
Query: 469 MKEGNVEMATMLRKEM 484
+ ++ A + +E+
Sbjct: 454 WSKEELKRALAMLEEL 469
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 122/258 (47%), Gaps = 6/258 (2%)
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+ ++K +++ ++++FN L+ F + ++ +LG P +++ L+
Sbjct: 1 MSNNIKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGL 60
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C E R+ EA L+ +M NV V + T++ G C G + A M G++ +
Sbjct: 61 CVEDRVSEALDLFHQMCKPNV----VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQ 116
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCR-KGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+T+ +V+G C+ GD SA+ + M +P+ +I L R +A ++
Sbjct: 117 ITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFI 176
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
K G+FP +Y +I G C GK EA ++ EM+ + P + +S I+ +KE
Sbjct: 177 EMQDK-GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKE 235
Query: 472 GNVEMATMLRKEMFENQV 489
G++ A L +EM + V
Sbjct: 236 GDLNSAQDLLQEMISSGV 253
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 48/102 (47%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ TFN L+ G+ + G + +++ EM R G + +Y L+ F + + + +
Sbjct: 371 PNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDI 430
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++EM V D + ++ G E+ RA E+ +S
Sbjct: 431 FQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMS 472
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 123/242 (50%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P V TFN LM G + + MA+ G PD Y+Y + C+ R+++A
Sbjct: 145 VQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAM 204
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++EEM ++ + + V T+I C+ G++ E EM GV++ V + LVNG+
Sbjct: 205 EMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGF 264
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR D+ +A + +M + G +P+ T LI C + + A++ +K + G+
Sbjct: 265 CRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAME-MKQEMSDEGVALD 323
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ +Y LI GL + G+ +A ++ EM+ G +P Y+ ID + K G+V+ K
Sbjct: 324 DVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLK 383
Query: 483 EM 484
EM
Sbjct: 384 EM 385
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P FN LM R G +V+ EM R G +P +++ LM+ C+ + A
Sbjct: 110 VPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNAN 169
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L M + DV Y I G C+ G + A E F EM G+ ++V L++ +
Sbjct: 170 ALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAH 229
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ GDV + + + +M +G + + L+ C R + A DI++ + K GL P
Sbjct: 230 CKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVE-EMRKDGLKPD 288
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ +Y LI G C+EG+++ A++++ EM +G Y+A I G K G A +
Sbjct: 289 KVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILC 348
Query: 483 EMFENQVRQED 493
EM E ++ ++
Sbjct: 349 EMMEAGLQPDN 359
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 111/483 (22%), Positives = 213/483 (44%), Gaps = 62/483 (12%)
Query: 14 SKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQ 73
S P+ P L+S ST P L++ V + GL P
Sbjct: 29 SPPRLLPLLVSAASTDDPAP-------LVSAVAKVYADE---------------GLLPDG 66
Query: 74 FSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARD---VIRV 130
S + L L+ + + +S ++ +YA +H+L A + AR ++R
Sbjct: 67 CSLLLLALRRGIRVPMPAWSDLMNR--LPSVPEAYAFYLHLLD-AGVPPEARQFNMLMRD 123
Query: 131 ALRSPENDPKLKLFEVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLM 188
+RS + +F+ +++ G P V F+ L+ + ++ + +R LM
Sbjct: 124 MIRSGKLASARNVFDEMLRR----GVQPTVVTFNTLMSGMCKASDLNN----ANALRGLM 175
Query: 189 SR-GLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLD----------------SDA 229
++ G++ V T A I + + + E++ E+ GL+ D
Sbjct: 176 AKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDV 235
Query: 230 TAGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
TAG+ + R V+ ++ +NAL+ GF R + D+ EM + G +PD +Y+ L
Sbjct: 236 TAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTL 295
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ C+E + A ++ +EM D+ V D V Y +I G + G AE EM +G+
Sbjct: 296 IDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGL 355
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+ + T+ +++ +C+ GDV + +M KG P T V++ C ++ A D
Sbjct: 356 QPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNA-D 414
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+L ++ G+ P + +Y L+ G C+ GK+ + ++++ KG +Y++ I+ +
Sbjct: 415 MLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKS---AKGMVSDFGVYTSLINEF 471
Query: 469 MKE 471
+K+
Sbjct: 472 VKK 474
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 7/227 (3%)
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
++ + G P+ +++LM ++ A +++EM + V+ VV +NT++ G C+
Sbjct: 102 YLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCK 161
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
++ A M +G+ T+ + G C+ G + A+ ++ +MC +G P
Sbjct: 162 ASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVV 221
Query: 390 IEVLIGELCDKRRVFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
+ LI C + V L++ + R VK L +Y L+ G C M+ A +
Sbjct: 222 LTTLIDAHCKEGDVTAGLELRWEMATRGVKADLV----AYNALVNGFCRVRDMKAANDIV 277
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
EM G +P Y+ IDG KEG ++ A +++EM + V +D
Sbjct: 278 EEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDD 324
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 1/157 (0%)
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A F+ + +GV + F L+ R+G + SA V+++M R+G +P T L+
Sbjct: 98 AYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMS 157
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
+C + A + L+ + K G+ P +Y I+GLC+ G++++A+++ EM +G
Sbjct: 158 GMCKASDLNNA-NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLN 216
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
P+ + + ID + KEG+V LR EM V+ +
Sbjct: 217 PNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKAD 253
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 207/502 (41%), Gaps = 77/502 (15%)
Query: 21 QLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTP--TQFSQIA 78
QLL + S+S PP+ ++N + + L + + L S+ +G P + ++ +
Sbjct: 577 QLLEGMN-SNSFPPNIITYNTV--LDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVM 633
Query: 79 LGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND 138
GL L F+ F Q K + ++ TI+ R+ L+ A +R + P D
Sbjct: 634 YGLVKEGRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQP--D 691
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
K+ V L++ L+ EK ++ + S GL +
Sbjct: 692 SKVDRSSV---------------HSLMEGILKRDGTEK---SIEFAENIASSGLLLDDLF 733
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
+ +I + K ++ +E+ ++ L G ++NAL+ G
Sbjct: 734 LSPIIRHFCKHKEALAAHELVKKFENLGVSLKTG----------------SYNALICGLV 777
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
E + E+++ EM RLGC+PD ++Y +++ + R+ + K+ EEM +K + V
Sbjct: 778 DEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYV 837
Query: 319 AYNTIIGGFCEI-----------------------------------GEMARAEEFFREM 343
YNTII G + G + AE F EM
Sbjct: 838 TYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEM 897
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G E + + L+NGY AGD + ++ M +G P+ + V+I LC R+
Sbjct: 898 LECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRL 957
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
+ L K ++ GL P +Y LI GL + G++EEAL + +M KG P+L Y++
Sbjct: 958 NDGLSYFK-QLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNS 1016
Query: 464 FIDGYMKEGNVEMATMLRKEMF 485
I K G A + +E+
Sbjct: 1017 LILYLGKAGKAAEAGKMYEELL 1038
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 2/246 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P V T++ LM+ F + E V + EM G P+ YSY++ + V + R+ EA
Sbjct: 202 VVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAY 261
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ +M ++ + DVV +I C+ G +A A++ F +M S + VT+ L++
Sbjct: 262 RILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKC 321
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+GD S ++N + G+ + + LC RV EALD+ K G+ P
Sbjct: 322 GDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQK-GIIPQ 380
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ SY LI G + + AL++ M G P+ + FI+ + K G + + R
Sbjct: 381 QYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGE-SLKALKRY 439
Query: 483 EMFENQ 488
E+ +++
Sbjct: 440 ELMKSK 445
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 116/243 (47%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P +++N+L+ GF + F + +++ M G P+ Y++ + + + +A K
Sbjct: 379 PQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKR 438
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E M+ K + DVVA N ++ G + G + A+ F E+ G+ ++T+ ++ +
Sbjct: 439 YELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSK 498
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A + D A+ ++ +M P+ + LI L R EA I + + L PT+
Sbjct: 499 ASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFY-ELKEMNLEPTDC 557
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L+ GL EGK++E +++ M F P++ Y+ +D K G V A + M
Sbjct: 558 TYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSM 617
Query: 485 FEN 487
N
Sbjct: 618 TMN 620
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 104/242 (42%), Gaps = 7/242 (2%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +T+N L+ + G + DV+ MA G P +YSVLM F + R L
Sbjct: 170 NAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLL 229
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM + V +V +Y I + G + A R+M G + VT L+ C A
Sbjct: 230 GEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDA 289
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLI---GELCDKRRVFEALDILKARVVKFGLFPT 422
G + A V+ M +P+ T L+ G+ D R V E + LKA G
Sbjct: 290 GRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKAD----GYNDN 345
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY + LC+ G+++EAL V EM KG P Y++ I G++K A L
Sbjct: 346 VVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFN 405
Query: 483 EM 484
M
Sbjct: 406 HM 407
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 5/234 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V NA++ G + G + V+ E+ +G PD +Y++++ + EA
Sbjct: 447 IVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAM 506
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++ EM + DV+A N++I + G A + F E+ +E + T+ L+ G
Sbjct: 507 KIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGL 566
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
R G V + + M F P T ++ LC V ALD+L + + G P
Sbjct: 567 GREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMN-GCMPD 625
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEM---VGKGFEPSLEIYSAFI-DGYMKEG 472
SY ++ GL +EG+++EA + +M + + I +F+ G MKE
Sbjct: 626 LSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEA 679
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 8/248 (3%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
R +VH+ LM G + EK + +A G D S ++ FC+ + A +
Sbjct: 696 RSSVHS---LMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHE 752
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L ++ + V +YN +I G + + AEE F EM G + T+ +++
Sbjct: 753 LVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMG 812
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
++ ++ + + +M KG++ T +I L + + EA++ L +++ G PT
Sbjct: 813 KSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAIN-LYYQLMSEGFSPTP 871
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ GL ++G +E+A + EM+ G EP+ IY+ ++GY G+ E E
Sbjct: 872 CTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVC----E 927
Query: 484 MFENQVRQ 491
+FE+ V Q
Sbjct: 928 LFESMVEQ 935
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 140/364 (38%), Gaps = 73/364 (20%)
Query: 203 IWEVSRGKGVISG---YEIYREVFGLDSDATAGIGKDVKRVVR-VRPNVHTFNALMVGFY 258
+++ GV+ Y + FG DA +G + R VRPNV+++ +
Sbjct: 193 VYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLG 252
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE---------------- 302
+ G E+ + +M GC+PD + +VL+ + C+ R+ +A+
Sbjct: 253 QAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRV 312
Query: 303 -------------------KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
++W ++ +VV+Y + C++G + A + F EM
Sbjct: 313 TYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEM 372
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GEL 397
G+ ++ L++G+ +A + A+ ++N M G P G T + I GE
Sbjct: 373 KQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGES 432
Query: 398 CDKRRVFEAL-------DILKARVVKFGLF---------------------PTEKSYMFL 429
+ +E + D++ V +GL P +Y +
Sbjct: 433 LKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMM 492
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
IK + +EA+K+ AEM+ P + ++ ID K G A + E+ E +
Sbjct: 493 IKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNL 552
Query: 490 RQED 493
D
Sbjct: 553 EPTD 556
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 7/188 (3%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +N L+ G+ G EKV +++ M G PD SY+V++ C + R+ +
Sbjct: 904 PNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSY 963
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++++ D +E D++ YN +I G + G + A + +M G+ + T+ L+ +
Sbjct: 964 FKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGK 1023
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLFP 421
AG A +Y ++ KG++P T LI F A R++ G P
Sbjct: 1024 AGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAY----GRMIVGGCRP 1079
Query: 422 TEKSYMFL 429
+YM L
Sbjct: 1080 NSSTYMQL 1087
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 122/278 (43%), Gaps = 38/278 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ ++N +M G +EG ++ ++ +M ++ PD + ++ F M+EA
Sbjct: 624 PDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEALHT 682
Query: 305 WEEM----------------------RD---KNVEH-----------DVVAYNTIIGGFC 328
E RD K++E D + + II FC
Sbjct: 683 VREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFC 742
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ E A E ++ GV + ++ L+ G +D A ++++M R G +P+
Sbjct: 743 KHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEF 802
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
T +++ + R+ + L I + + G T +Y +I GL + ++EA+ + +
Sbjct: 803 TYHLILDAMGKSMRIEDMLKI-QEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQ 861
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
++ +GF P+ Y +DG +K+GN+E A L EM E
Sbjct: 862 LMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLE 899
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P+V N+L+ Y+ G + ++ E+ + EP +Y+ L+A E +++E
Sbjct: 516 RCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEV 575
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L E M + +++ YNT++ C+ GE+ A + M ++G ++ ++ G
Sbjct: 576 MQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYG 635
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ G +D A ++ M +K P+ +T+ ++ + EAL ++ +++
Sbjct: 636 LVKEGRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKV 694
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
S L++G+ + E++++ + G
Sbjct: 695 DRSSVHSLMEGILKRDGTEKSIEFAENIASSGL 727
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 71/147 (48%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ ++ ++ +G + ++ +G EPD +Y++L+ + R+ EA
Sbjct: 937 MNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEAL 996
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ +M K + ++ YN++I + G+ A A + + E+ G + + T+ L+ GY
Sbjct: 997 SLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGY 1056
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGST 389
+G ++A Y M G P ST
Sbjct: 1057 SVSGSPENAFAAYGRMIVGGCRPNSST 1083
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 112/251 (44%), Gaps = 6/251 (2%)
Query: 204 WEVSRGKGVISGYEIYREV-FGLDSDATAGIGKDV---KRVVRVRPNVHTFNALMVGFYR 259
+E+ + KG++ V +GL G+ K V + + + P+ T+ ++ +
Sbjct: 439 YELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSK 498
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
++ ++ EM C PD + + L+ + + R EA K++ E+++ N+E
Sbjct: 499 ASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCT 558
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YNT++ G G++ + M + + +T+ +++ C+ G+V+ A+ + M
Sbjct: 559 YNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMT 618
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
G P+ S+ ++ L + R+ EA + +K L P + ++ G M
Sbjct: 619 MNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQ--MKKVLAPDYATVCTILPSFVRSGLM 676
Query: 440 EEALKVQAEMV 450
+EAL E +
Sbjct: 677 KEALHTVREYI 687
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 119/281 (42%), Gaps = 36/281 (12%)
Query: 97 HKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALR---SPE------------NDPKL 141
H K + +Y TII L +++++ A ++ + SP D +
Sbjct: 828 HNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNI 887
Query: 142 KLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC 199
+ E L ECG P ++++L+ + EK+ ++ ++ +G++ + +
Sbjct: 888 EDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKV---CELFESMVEQGMNPDIKSY 944
Query: 200 NALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYR 259
+I + + G ++++ + + P++ T+N L+ G +
Sbjct: 945 TVVIDTLCADGRLNDGLSYFKQLTDMG----------------LEPDLITYNLLIHGLGK 988
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G E+ ++ +M + G P+ Y+Y+ L+ + + EA K++EE+ K + +V
Sbjct: 989 SGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFT 1048
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
YN +I G+ G A + M + G +S T+ L N
Sbjct: 1049 YNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPN 1089
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 142/270 (52%), Gaps = 12/270 (4%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
D+ + + + ++ + ++P+V ++A++ G +++G +++++EM G PD +Y
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
S ++ FC + EA++L +EM + + DVV ++ +I + G++ A++ +EM
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR-----------KGFEPEGSTIEVLI 394
SGV + VT L++G C +G + A+ ++ M + G EP+ T +LI
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
L ++ + EA + L + G+ P +Y +I GLC++ +++EA ++ M K F
Sbjct: 311 SGLINEGKFLEAEE-LYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
P++ ++ I GY K G V+ L EM
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEM 399
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 127/232 (54%), Gaps = 9/232 (3%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG--LDSDATAGIGKDVKR 239
D+++ ++S G+ V TCN L+ + + E+++ + +D DAT
Sbjct: 243 DLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNG---- 298
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V P+V T+N L+ G EG F + E+++ EM G PD +YS ++ C++ R+
Sbjct: 299 ---VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLD 355
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
EA ++++ M K+ ++V +NT+I G+C+ G + E F EMG G+ ++++T+ L+
Sbjct: 356 EATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLI 415
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
G+ + G+++ ++ ++ +M G P+ TI ++ L K + +AL +L+
Sbjct: 416 RGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLE 467
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 126/253 (49%), Gaps = 11/253 (4%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEERRMREA 301
++PN T+ ++ G + G ++ +M L +PD YS ++ ++ R +A
Sbjct: 112 LQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDA 171
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ L+ EM+DK + D+V Y+ +I GFC G+ + A+ +EM + + VTF L+N
Sbjct: 172 QNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINA 231
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF---- 417
+ GD++SA + +M G P T L+ LCD ++ +AL++ KA
Sbjct: 232 LVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDID 291
Query: 418 ------GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
G+ P ++Y LI GL EGK EA ++ EM +G P YS+ I+G K+
Sbjct: 292 ATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQ 351
Query: 472 GNVEMATMLRKEM 484
++ AT + M
Sbjct: 352 SRLDEATQMFDSM 364
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 119/256 (46%), Gaps = 12/256 (4%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V ++ P+V TF+ L+ +EG +D+ EM G P+ + + L+ C+ +++
Sbjct: 215 VRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLK 274
Query: 300 EAEKLWEEMRD-----------KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+A ++++ M+ VE DV YN +I G G+ AEE + EM G+
Sbjct: 275 DALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 334
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+VT+ ++NG C+ +D A +++ M K F P T LI C V + L+
Sbjct: 335 VPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLE 394
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+ + + G+ +Y+ LI+G + G + +L + EM+ G P + G
Sbjct: 395 LF-CEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL 453
Query: 469 MKEGNVEMATMLRKEM 484
+ ++ A + +E+
Sbjct: 454 WSKEELKKALAMLEEL 469
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 122/258 (47%), Gaps = 6/258 (2%)
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+ ++K +++ ++++FN L+ F + ++ +LG P +++ L+
Sbjct: 1 MSNNIKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGL 60
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C E R+ EA L+ +M NV V + T++ G C G + A M G++ +
Sbjct: 61 CVEDRVSEALDLFHQMCKPNV----VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQ 116
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCR-KGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+T+ +V+G C+ GD SA+ + M +P+ +I L R +A ++
Sbjct: 117 ITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFI 176
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
K G+FP +Y +I G C GK EA ++ EM+ + P + +S I+ +KE
Sbjct: 177 EMQDK-GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKE 235
Query: 472 GNVEMATMLRKEMFENQV 489
G++ A L +EM + V
Sbjct: 236 GDLNSAQDLLQEMISSGV 253
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ TFN L+ G+ + G + +++ EM R G + +Y L+ F + + + +
Sbjct: 371 PNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDI 430
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++EM V D + ++ G E+ +A E+ +S
Sbjct: 431 FQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQMS 472
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 179/390 (45%), Gaps = 39/390 (10%)
Query: 125 RDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETC---V 181
+ +I V RS L+LF+ + Y A F+ L+ C TC +
Sbjct: 151 QQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSC-----------TCANLL 199
Query: 182 DIVRMLMSR----GLSVKVSTCNALIWE-VSRGK--GVISGYE--IYREVFGLDSDATAG 232
D L+S+ G V+ N L+ + RG+ V++ +E I V+ D +
Sbjct: 200 DASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNV 259
Query: 233 IGKDVKRVVRVR---------------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
+ K V RV +V+ P+ T N ++ G R + +V + R G
Sbjct: 260 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDG 319
Query: 278 -CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
C P+ +++ +++ +C+ ++ +A ++ +M + + V YN +I G+ ++G++ A
Sbjct: 320 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 379
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
E +++M VTF L++GYCR G +D A+ +++DM + +P T ++I
Sbjct: 380 VEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHS 439
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC + R EA+ +L ++ + P Y +I LC+ GK++EA ++ M KG P
Sbjct: 440 LCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRP 499
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
Y+ I GY + + A M EM E
Sbjct: 500 DKYTYTILIIGYCMKSRISEAIMFFHEMVE 529
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 128/250 (51%), Gaps = 3/250 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM-REAEK 303
P+V +FN ++ G R G +K ++ M GC PD ++++++ C + R E
Sbjct: 252 PDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEV 311
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L RD +VV + ++I G+C+ G++ A + +M SG+ ++VT+ L+NGY
Sbjct: 312 LRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYG 371
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ GD+ SA+ VY M R P+ T LI C ++ +AL I + + + + P
Sbjct: 372 KVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIW-SDMAQHRIQPNV 430
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEM-VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ +I LC++ + +EA+ + E+ + P IY+ ID K G V+ A ++RK
Sbjct: 431 YTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRK 490
Query: 483 EMFENQVRQE 492
M E R +
Sbjct: 491 GMEEKGCRPD 500
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 189/420 (45%), Gaps = 31/420 (7%)
Query: 61 LLSLCRSGLTPTQ---FSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSR 117
++ LCRSG F Q+ +P RF SF C + L + AT++ S
Sbjct: 154 IVVLCRSGRQADALQLFDQMTTHYGYSPDA--RFLSFLVSSCTCANLLDASATLLSKASE 211
Query: 118 --ARLIGPARDVIRVAL--RSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKN 173
R+ A + + +L R +D + LFE ++ R + F+++IK V
Sbjct: 212 FGCRVEAYAYNKLMSSLIGRGRVHD-VVALFERWIQD-RVYSPDVWSFNVVIKGVCRVGQ 269
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
++K +++V + G S T N ++ + R V G+E+ R +
Sbjct: 270 VQKA---LELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRL----------- 315
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
+R PNV TF +++ G+ + G E V+ +M G P+ +Y+VL+ +
Sbjct: 316 ----QRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYG 371
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + A +++++M DVV ++++I G+C G++ A + +M ++ +
Sbjct: 372 KVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVY 431
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDM-CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
TF +++ C+ D AI + N++ R P+ +I LC +V EA ++++
Sbjct: 432 TFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEA-NLIRK 490
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ + G P + +Y LI G C + ++ EA+ EMV G P + FI +K G
Sbjct: 491 GMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAG 550
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 133/254 (52%), Gaps = 7/254 (2%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ T+NA++ G +G + + M GC+P+ ++Y++L+ C R +AE L
Sbjct: 326 NIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLM 385
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M + D++ +NTIIG C+ G +A E F++M G +SVT+ ++ G +
Sbjct: 386 AKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKT 445
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G ++ ++ + N+M KGF PE +L L ++ ++ EA+ ++ ++ G+ P
Sbjct: 446 GKMEQSLELLNEMGSKGFNPE-INYHLLAECLNEEDKLVEAIQMVH-KLQDTGISPQAVL 503
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI-----DGYMKEGNVEMATML 480
Y ++ GLC GK ++A+ + + MV G P YS I +GYMKE ++T+
Sbjct: 504 YNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLS 563
Query: 481 RKEMFENQVRQEDG 494
+++ + + + D
Sbjct: 564 SRDVIVDNLIKNDA 577
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 1/217 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +N ++ G G +E VE++ EM C P + SV+++ C+E + A +L
Sbjct: 255 PNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRL 314
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+M + ++V YN ++ G CE G + A M G + + T+ LV G C
Sbjct: 315 LEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCN 374
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A + A + M + P+ T +IG LC K +A+++ K ++ + G P
Sbjct: 375 AERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFK-QMPEKGCCPNSV 433
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+Y +I+GL + GKME++L++ EM KGF P + +
Sbjct: 434 TYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEINYH 470
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 121/265 (45%), Gaps = 6/265 (2%)
Query: 227 SDATAGIGK--DVKRVVR---VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
+D +G+ + +RVV V P+ + +N LM G + M GC PD
Sbjct: 127 ADGYCRVGRLDEARRVVDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPD 186
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
+Y++L+ C+ R R+A +L + MR + V YN I+ G C G++ A E
Sbjct: 187 VVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLN 246
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
+ G ++V + ++ G AG + + +M + P +T+ V+I LC +
Sbjct: 247 SLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEG 306
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
A+ +L+ ++ K +Y ++ GLCE+G ++ AL + + M G +P++ Y
Sbjct: 307 LFQRAIRLLE-KMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTY 365
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFE 486
+ + G E A L +M +
Sbjct: 366 NILVKGLCNAERWEDAEDLMAKMSQ 390
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 7/208 (3%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C PD + L+ C R +A ++ E V Y+ + G+C +G + A
Sbjct: 84 CPPDVALANRLVRDLCRRGRPADAARVVEACGSAAT---AVTYSALADGYCRVGRLDEAR 140
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
M V S+ + L++ C G V A+++ ++M +G P+ T +L+
Sbjct: 141 RVVDGMP---VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAA 197
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C R +A++++ V+ G PT +Y ++ G+C EG ++ A ++ + G P+
Sbjct: 198 CKGRGYRQAMELIDLMRVE-GCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPN 256
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y+ + G G E L EMF
Sbjct: 257 TVNYNTVLKGLRTAGRWEDVEELIAEMF 284
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P +N +++G R G ++ D+ M GC PD +YS+L+ E M+EA
Sbjct: 497 ISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEAR 556
Query: 303 KLWEEMRDKNVEHDVVAYN 321
+L + ++V D + N
Sbjct: 557 ELLSTLSSRDVIVDNLIKN 575
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 194/446 (43%), Gaps = 69/446 (15%)
Query: 109 ATIIHILSRARLIGP----ARDVIRVALRSPENDPK--LKLFEVLVKTYRECGSAPFVFD 162
A ++H L R R + P A V+ RSP P+ L +F L++ + F+
Sbjct: 155 AQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNH--YTFN 212
Query: 163 LLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVI-------- 213
LL+ C + + + T + + GLS T N L+ R KG++
Sbjct: 213 LLVHTHCSKGTLADALAT----LSTMQGFGLSPDAVTYNTLLNAHCR-KGMLGEARALLA 267
Query: 214 ----SGYEIYREVFGLDSDATAGIG--KDVKRVVR------VRPNVHTFNALMVGFYREG 261
G + + A A +G K +VV P++ T+N L VG + G
Sbjct: 268 RMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAG 327
Query: 262 AFEKVEDVWVEMARLGCE-PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
++ + EM RL PD +Y+ L+ + R +A +L EEMRDK V+ +V +
Sbjct: 328 KVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTH 387
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
N ++ C+ G++ A ++ G+ +T+ L++ YC+AG+V A + ++M
Sbjct: 388 NIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVG 447
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKA---------------------------- 412
KG + + T+ ++ LC +R +A ++L +
Sbjct: 448 KGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEP 507
Query: 413 ------RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
++++ L P+ +Y LIKGLC +++EA+ E+V KG P Y+ I
Sbjct: 508 ALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIH 567
Query: 467 GYMKEGNVEMATMLRKEMFENQVRQE 492
Y KEG++E A +M EN + +
Sbjct: 568 AYCKEGDLENAFRFHNKMVENSFKPD 593
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 140/308 (45%), Gaps = 18/308 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K+E + + + GL+ V T N LI + V + + E+ +GK
Sbjct: 399 KLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM----------VGK 448
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+K + T N ++ + +E E++ + G PD SY +MA + +E
Sbjct: 449 GLKM------DTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKE 502
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
A +LW++M ++ + + YNT+I G C + + A + E+ G+ T+
Sbjct: 503 YNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTY 562
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++ YC+ GD+++A +N M F+P+ T L+ LC ++ +AL + ++ V
Sbjct: 563 NIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVE 622
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K G +Y LI+ +C+ G ++ AL +M KG +P Y+ + + G E
Sbjct: 623 K-GKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSE 681
Query: 476 MA-TMLRK 482
A ML K
Sbjct: 682 EAHNMLHK 689
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 120/249 (48%), Gaps = 5/249 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P + T N ++ +EG E+ ++A G PD +Y+ L+ +C+ + +A
Sbjct: 380 VKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAF 439
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM K ++ D NT++ C++ AEE G V++ ++ Y
Sbjct: 440 TLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAY 499
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ + + A+ +++ M + P ST LI LC R+ EA+D L +V+ GL P
Sbjct: 500 FKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLN-ELVEKGLVPD 558
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E +Y +I C+EG +E A + +MV F+P + + ++G G ++ A
Sbjct: 559 ETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKAL---- 614
Query: 483 EMFENQVRQ 491
++FE+ V +
Sbjct: 615 KLFESWVEK 623
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 123/265 (46%), Gaps = 37/265 (13%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P++ T+N L+ G R ++ D E+ G PD +Y++++ +C+E + A
Sbjct: 519 KLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENA 578
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ +M + + + DVV NT++ G C G++ +A + F G + +T+ L+
Sbjct: 579 FRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQS 638
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG--- 418
C+ GDVD+A+ ++DM KG +P+ T V++ L + R EA ++L ++ G
Sbjct: 639 MCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLH-KLADSGKLS 697
Query: 419 -------LFPTE--------------------------KSYMFLIKGLCEEGKMEEALKV 445
L P+ ++YM + GLC G+++EA V
Sbjct: 698 QSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAV 757
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMK 470
EM+ KG Y ++G +K
Sbjct: 758 LDEMMQKGMPVDSSTYITLMEGLIK 782
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/302 (18%), Positives = 116/302 (38%), Gaps = 59/302 (19%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKV 196
+P L+L++ +++ R+ + ++ LIK C +E+++ +D + L+ +GL
Sbjct: 506 EPALRLWDQMIE--RKLIPSISTYNTLIKGLC----RMERLKEAIDKLNELVEKGLVPDE 559
Query: 197 STCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVG 256
+T N +I + + + + + ++ +P+V T N LM G
Sbjct: 560 TTYNIIIHAYCKEGDLENAFRFHNKMVE----------------NSFKPDVVTCNTLMNG 603
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
G +K ++ G + D +Y+ L+ C+ + A +++M K ++ D
Sbjct: 604 LCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPD 663
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV----------------------- 353
YN ++ E G A ++ SG S S
Sbjct: 664 AFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPE 723
Query: 354 -------------TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
T+ +NG C G + A V ++M +KG + ST L+ L +
Sbjct: 724 AESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKR 783
Query: 401 RR 402
++
Sbjct: 784 QK 785
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 131/254 (51%), Gaps = 6/254 (2%)
Query: 229 ATAGIGKDVKRVVRV-----RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
A +G+G+ +K + + +P+V T+N L+ G +EG ++ M G +P+
Sbjct: 28 AESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVI 87
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
++++++ C R +AEKL EM K VV +N +I C G + RA + +M
Sbjct: 88 THNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKM 147
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G +S+++ L++G+C+ +D AI M +G P+ T ++ LC +V
Sbjct: 148 PTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKV 207
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
A+++L K G P +Y +I GL + GK ++A+++ EM GKG +P + YS+
Sbjct: 208 DAAVELLNQLSSK-GCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSS 266
Query: 464 FIDGYMKEGNVEMA 477
I G +EG VE A
Sbjct: 267 LIAGLSREGKVEEA 280
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN L+ R+G + D+ +M GC P+ SY+ L+ FC+E++M A +
Sbjct: 119 PSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQY 178
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M + D+V YNT++ C+ G++ A E ++ G +T+ +++G +
Sbjct: 179 LEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSK 238
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G D A+ + ++M KG +P+ T LI L + +V EA+ V FG+ P
Sbjct: 239 VGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFH-DVEGFGVKPNAF 297
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y ++ GLC+ + + A+ A M+ KG +P+ Y+ I+G EG + A L E+
Sbjct: 298 TYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ L+ E + + EM GC+PD +Y+VL+ C+E R+ EA K
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M + +V+ +N I+ C G AE+ EM G S VTF L+N CR
Sbjct: 74 LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + AI + M G P + L+ C ++++ A+ L+ V + G +P
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSR-GCYPDIV 192
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y ++ LC++GK++ A+++ ++ KG P L Y+ IDG K G + A L EM
Sbjct: 193 TYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEM 252
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 1/209 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N L+ GF +E ++ M GC PD +Y+ ++ C++ ++ A +L
Sbjct: 154 PNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVEL 213
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ K ++ YNT+I G ++G+ +A E EM G++ +T+ L+ G R
Sbjct: 214 LNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSR 273
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G V+ AI ++D+ G +P T ++ LC ++ A+D L A ++ G PTE
Sbjct: 274 EGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFL-AYMISKGCKPTEV 332
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
SY LI+G+ EG +EAL++ E+ +G
Sbjct: 333 SYTILIEGIANEGLAKEALELLNELCSRG 361
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 1/207 (0%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C PD +Y++L+ C E + +A KL +EM + + DVV YN ++ G C+ G + A
Sbjct: 12 CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI 71
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+F M G + + +T ++ C G A + +M RKG P T +LI L
Sbjct: 72 KFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFL 131
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C K + A+DIL+ ++ G P SY L+ G C+E KM+ A++ MV +G P
Sbjct: 132 CRKGLLGRAIDILE-KMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPD 190
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ Y+ + K+G V+ A L ++
Sbjct: 191 IVTYNTMLTALCKDGKVDAAVELLNQL 217
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 131/295 (44%), Gaps = 39/295 (13%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C S+ ++ +I+ L R L+G A D++ + P + C
Sbjct: 117 CSPSVVTFNILINFLCRKGLLGRAIDILE---KMPTHG---------------CTPNSLS 158
Query: 161 FD-LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
++ LL C E +K++ + + +++SRG + T N ++ + + V + E+
Sbjct: 159 YNPLLHGFCKE----KKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELL 214
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
+ L S + P + T+N ++ G + G ++ ++ EM G +
Sbjct: 215 NQ---LSSKGCS-------------PVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLK 258
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +YS L+A E ++ EA K + ++ V+ + YN+I+ G C+ + RA +F
Sbjct: 259 PDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDF 318
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
M G + + V++ L+ G G A+ + N++C +G + S +V++
Sbjct: 319 LAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 124/246 (50%), Gaps = 1/246 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+ TFN L+ +EG K V M + +PD +Y+ LM C M +
Sbjct: 259 KIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKT 318
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+++ M K V++Y T+I G+C+I M +A F EM G+ +VT+ L++G
Sbjct: 319 VNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHG 378
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C G + AI ++++M G P+ T +L LC R+ EA+ +LK + L P
Sbjct: 379 LCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKV-IEGTNLDP 437
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y ++ G+C G++E A + +++ KG P + Y+ I+G ++G + A+ L
Sbjct: 438 DIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLF 497
Query: 482 KEMFEN 487
EM EN
Sbjct: 498 GEMDEN 503
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 123/251 (49%), Gaps = 1/251 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
DV ++P+V T+N+LM G K +V+ M R GC P SY+ L+ +C+
Sbjct: 288 DVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKI 347
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ M +A L+EEM + + D V YNT+I G C +G + A F EM + G VT+
Sbjct: 348 QIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTY 407
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L + C+ + A+++ + +P+ +++ +C + A D+ +++
Sbjct: 408 RILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLF-SKLS 466
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
GL P ++Y +I GLC++G + EA K+ EM G P+ Y+ G+++
Sbjct: 467 SKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETL 526
Query: 476 MATMLRKEMFE 486
A L +EM
Sbjct: 527 RAIQLFQEMLS 537
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 120/235 (51%), Gaps = 1/235 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN T+++L+ G G +++ ++ M PD +++ L+ C+E + +A
Sbjct: 225 ISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAH 284
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M +++ DVV YN+++ G C EM + F M G S +++ L+NGY
Sbjct: 285 YVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGY 344
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ +D A+ ++ +M ++G P+ T LI LC R+ +A+ + VV +G P
Sbjct: 345 CKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVV-YGQIPD 403
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y L LC+ ++ EA+ + + G +P + IYS +DG + G +E A
Sbjct: 404 LVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAA 458
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 121/257 (47%), Gaps = 3/257 (1%)
Query: 238 KRVVRVRP--NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R++R+RP ++ F+ L+ R + V ++ +M G + Y+ ++L+ FC
Sbjct: 43 NRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHL 102
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ A + ++ + + T+I G C G++ A + F +M G + +T+
Sbjct: 103 NRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTY 162
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+NG C+ G+ +AI M ++ P +I LC R++ EAL + +
Sbjct: 163 GTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLA 222
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K G+ P +Y LI GLC G +EA+++ M+ + P ++ +D KEG V
Sbjct: 223 K-GISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVV 281
Query: 476 MATMLRKEMFENQVRQE 492
A + M ++ ++ +
Sbjct: 282 KAHYVVDVMIQSDLKPD 298
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 110/223 (49%), Gaps = 1/223 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +T N L+ F V ++ +LG +P +++ L+ C E ++ EA +L+
Sbjct: 88 NTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLF 147
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++M + + DV+ Y T+I G C++G + A F R M + V + +++ C+
Sbjct: 148 DKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKD 207
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+ A+ +++DM KG P T LI LC EA+ + A + + + P + +
Sbjct: 208 RQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR-KIMPDQLT 266
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+ L+ LC+EG + +A V M+ +P + Y++ +DG+
Sbjct: 267 FNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGH 309
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ TF L+ G EG + ++ +M G +PD +Y L+ C+ A +
Sbjct: 121 QPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIR 180
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
M +N VV Y+TII C+ ++ A F +M G+ ++ T+ L++G C
Sbjct: 181 FLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLC 240
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G AI ++ M + P+ T L+ LC + V +A ++ +++ L P
Sbjct: 241 ILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDV-MIQSDLKPDV 299
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ G C +M + + V MV KG PS+ Y+ I+GY K ++ A L +E
Sbjct: 300 VTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEE 359
Query: 484 M 484
M
Sbjct: 360 M 360
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 1/206 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N L+ G G ++ EM G PD +Y +L C+ R+ EA L
Sbjct: 367 PDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVL 426
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + N++ D+ Y+ ++ G C GE+ A + F ++ G+ T+ ++NG C+
Sbjct: 427 LKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQ 486
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A ++ +M G P T ++ A+ + + + + G
Sbjct: 487 QGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSR-GFSIDVS 545
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMV 450
+ L++ L ++G + ++ E V
Sbjct: 546 TTTLLVEMLSDDGLDQSVKQILCEFV 571
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 85/194 (43%), Gaps = 1/194 (0%)
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A L+ M +V ++ ++ + + +++M G+ ++ T L+
Sbjct: 37 DALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILI 96
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
N +C + A V D+ + G++P +T LI LC + ++ EAL + ++ G
Sbjct: 97 NSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFD-KMTGEGF 155
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI GLC+ G A++ M + P++ +YS ID K+ + A
Sbjct: 156 QPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALS 215
Query: 480 LRKEMFENQVRQED 493
L +M + +
Sbjct: 216 LFSDMLAKGISPNN 229
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V T+ ++ G ++G + ++ EM GC P+ +Y+++ F A
Sbjct: 470 LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAI 529
Query: 303 KLWEEMRDKNVEHDV 317
+L++EM + DV
Sbjct: 530 QLFQEMLSRGFSIDV 544
>gi|449474629|ref|XP_004154237.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11710, mitochondrial-like [Cucumis sativus]
Length = 644
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 198/464 (42%), Gaps = 60/464 (12%)
Query: 55 KSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHI 114
+ RW L L S LT + ++ +N+P LAL F+++ + + HSL S T++H+
Sbjct: 43 QRRWKFLEQLSPS-LTNSLVCRVIREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHV 101
Query: 115 LSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNI 174
L +R A ++ + P L++ L+ +Y C S P VF L++ C +++++
Sbjct: 102 LVNSRNFNDALSIMESLILXNGKSP-LEVLGGLMNSYEICNSNPAVFXALVRTCTQLRSV 160
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
E D++R L G V + W + G ++D +
Sbjct: 161 EG---AYDVIRKLRLEGFWVTIHA-----WNNFLNLLLKLG----------ETDKFXNMY 202
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
K++ NV+TFN ++ E + V M ++ P+ +++++ +
Sbjct: 203 KEMI-ASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVXFNMIIDKANK 261
Query: 295 ERRMREAEKLW---EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
M A KL E + +V ++VAYN II GFC+I + A+ EM G++ +
Sbjct: 262 MGEMDLALKLTRNIEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIDFN 321
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
T+ L++GY R G +D A + ++M P+ LI L + + EA L
Sbjct: 322 ERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEA-SFLL 380
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ------------------------- 446
+ ++ + P E +Y L KGLC G + +AL+V
Sbjct: 381 SDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQS 440
Query: 447 ----------AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+ M+ G +P + Y +DG+ KEG +E A +
Sbjct: 441 RNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQI 484
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 118/244 (48%), Gaps = 11/244 (4%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+R+ P+ +N+L+ Y EG E+ + +M PD ++YS+L C + +
Sbjct: 351 MRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTKGLCVSGHLNK 410
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A ++ + ++++ D YN +I + +A A++ M + G++ VT+ V+
Sbjct: 411 ALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVD 470
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G+C+ G +++A+ +Y+ + ++ LC + ++ A +L ++ + G F
Sbjct: 471 GHCKEGKIEAAVQIYD---------KAVVYNSILDGLCKQGSIYAA-KLLVDKLQQNG-F 519
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y L+ G C G++E+A + EM+ G ++ Y+ I+ K G ++ A L
Sbjct: 520 LDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMEL 579
Query: 481 RKEM 484
+ M
Sbjct: 580 MRAM 583
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 17/187 (9%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P++ T+ + G +EG E ++ Y+ ++ C++ + A+
Sbjct: 458 IKPDMVTYGTPVDGHCKEGKIEAAVQIY---------DKAVVYNSILDGLCKQGSIYAAK 508
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L ++++ +N D V YNT++ GFC GE+ +A F EM G + V++ ++N
Sbjct: 509 LLVDKLQ-QNGFLDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMINFL 567
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG---ELCDKRRVFEALDILKARVVKFGL 419
C+ G + A+ + M +G P+ T LI E C V E L ++ G
Sbjct: 568 CKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVETCGSEDVIE----LHGYMMLKGA 623
Query: 420 FPTEKSY 426
P K+Y
Sbjct: 624 VPDRKTY 630
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G D GK ++ V++ +N+++ G ++G+ + + V+ + D
Sbjct: 465 YGTPVDGHCKEGK-IEAAVQIYDKAVVYNSILDGLCKQGSIYAAK-LLVDKLQQNGFLDP 522
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+Y+ L+ FC + +A L+ EM + ++V+YN +I C++G + +A E R
Sbjct: 523 VTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRA 582
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
M G+ +T+ L+ + + I ++ M KG P+ T
Sbjct: 583 MSSQGIIPDLITYTTLITNFVETCGSEDVIELHGYMMLKGAVPDRKT 629
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N L+ GF G EK +++EM +G + SY++++ C+ +++A +L M
Sbjct: 524 TYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAM 583
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ + D++ Y T+I F E E M L G T+ V+
Sbjct: 584 SSQGIIPDLITYTTLITNFVETCGSEDVIELHGYMMLKGAVPDRKTYRSFVS 635
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 119/240 (49%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+ LM G + AF+K + EM + G + Y+Y+ L+ C R+ E ++
Sbjct: 454 PNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEM 513
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + + YN+II GF + G M A +++M G+ + VT+ ++GYC+
Sbjct: 514 LKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCK 573
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D A+ + ND+ KG P+ + LI C + + AL +L ++K GL P
Sbjct: 574 TSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVL-VLMLKDGLLPNIS 632
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y I G MEEAL++ +M+ +G + Y+ IDG+ K+GNV A L EM
Sbjct: 633 VYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEM 692
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 119/233 (51%), Gaps = 2/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + FN ++ G + ++ ++ EMA G PD ++Y++L+ C+ R++REA L
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
WE+M + V+ +V Y++++ +C G M A + + EM G + VT+ L+ G+
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D A + +M + G T LI LC RV E ++LK R G PT
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLK-RFETEGFVPTAM 527
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y +I G + G M A V +M KG P++ Y++FIDGY K ++A
Sbjct: 528 TYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLA 580
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 120/247 (48%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P + T+++L++ + G ++ ++ EM G P+ +Y+ LM + +A
Sbjct: 417 VKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAY 476
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EM+ V + YNT+I G C +G + E + G +++T+ ++NG+
Sbjct: 477 ALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGF 536
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+AG + SA VY MC KG P T I C AL +L K GL P
Sbjct: 537 IKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCK-GLRPD 595
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI G C+EG M AL+V M+ G P++ +Y++FI GY +E A L +
Sbjct: 596 IAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYE 655
Query: 483 EMFENQV 489
+M + +
Sbjct: 656 KMIKEGI 662
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P T+N+++ GF + G V+ +M G P+ +Y+ + +C+ A K+
Sbjct: 524 PTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKM 583
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++R K + D+ AYN++I GFC+ G M+ A + M G+ + + + GY
Sbjct: 584 LNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKN 643
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
++ A+ +Y M ++G + + +T LI V AL + V K G P
Sbjct: 644 LKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAK-GNIPDHI 702
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ L GLC G +++A K+ EM P++ +Y+ I+GY++ G ++ A L EM
Sbjct: 703 TFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEM 762
Query: 485 FENQVRQED 493
E ++ +D
Sbjct: 763 LERKIMPDD 771
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 4/250 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P TFN+++ + G E+ + E+ G + + LM +C +R +R+A +
Sbjct: 245 PWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDI 304
Query: 305 WEE-MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+EE +RD V DV Y +I G E G +A E R+M G+ S+ F ++ G
Sbjct: 305 FEETLRDGLVPTDVT-YTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLL 363
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
A+ ++ +M G P+ T +LI LC +R++ EAL++ + ++ + G+ P
Sbjct: 364 NDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWE-KMNETGVKPYI 421
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ C G M+EA+K+ EM GKGF P++ Y+ + G++ + + A L E
Sbjct: 422 VTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAE 481
Query: 484 MFENQVRQED 493
M +N V D
Sbjct: 482 MKQNGVSCND 491
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 106/229 (46%), Gaps = 13/229 (5%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN+ T+ + + G+ + + + ++ G PD +Y+ L+ FC+E M A
Sbjct: 557 IPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHAL 616
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ M + ++ YN+ I G+ + M A + +M G++ + T+ L++G+
Sbjct: 617 QVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGF 676
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC------DKRRVFEALDILKARVVK 416
+ G+V A+ +Y++M KG P+ T L LC D R++ + ++ L R
Sbjct: 677 SKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIR--- 733
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
P Y LI G GK++EA ++ EM+ + P Y +
Sbjct: 734 ----PNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 1/218 (0%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM G D + + V+M +E +A +L++EM +E D + I C++
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ RA R+M +G TF +V+ + G ++ A+ + +++ G +
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
L+ C +R V +ALDI + ++ GL PT+ +Y LI+G EEG E+A ++ +M
Sbjct: 287 TLMHGYCLQREVRKALDIFE-ETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRD 345
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G PS ++ I G + + + A L KEM ++ +
Sbjct: 346 HGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI 383
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 76/151 (50%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ +N+ + G+ E+ ++ +M + G + D +Y+ L+ F ++ + A KL
Sbjct: 629 PNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKL 688
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM K D + + + G C G++ A + EM + + + + L+NGY R
Sbjct: 689 YSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLR 748
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
G + A ++++M + P+ +T ++L+G
Sbjct: 749 NGKLQEAFRLHDEMLERKIMPDDTTYDILVG 779
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 3/248 (1%)
Query: 244 RP-NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
RP + F+ +M ++EG ++ ++ EM EPD SV +A C+ R A
Sbjct: 173 RPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRAL 232
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +M+D +N+++ + G M A E+ +G + S V L++GY
Sbjct: 233 LVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGY 292
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +V A+ ++ + R G P T VLI C + + E L ++ GL P+
Sbjct: 293 CLQREVRKALDIFEETLRDGLVPTDVTYTVLI-RGCTEEGMPEKAYELCRQMRDHGLLPS 351
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ +IKGL + ++A+ + EM G P Y+ I + + A L +
Sbjct: 352 TNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWE 410
Query: 483 EMFENQVR 490
+M E V+
Sbjct: 411 KMNETGVK 418
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM G + F+ ++ + G D A+ ++++M EP+ V I LC R
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
AL +L+ ++ G P + ++ ++ L + G+MEEAL ++ E++ G + S+ +
Sbjct: 227 DANRALLVLR-KMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLA 285
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
+ + GY + V A ++FE +R
Sbjct: 286 TTLMHGYCLQREVRKAL----DIFEETLRD 311
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 127/244 (52%), Gaps = 1/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P V T+N L+ G R G ++ +W M + G P+ Y L+ + A
Sbjct: 273 IEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRAL 332
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
LW+++ + + + A+NT+I G C++GEM A+E F+ M G + +T+ L +GY
Sbjct: 333 TLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGY 392
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G+V+ A + M ++ P LI L +++ + +D+L A + GL P
Sbjct: 393 CKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLL-AEMDTRGLSPN 451
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI G C++G++++A EM+GKGF P++ I S + + G ++ A ML +
Sbjct: 452 VVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQ 511
Query: 483 EMFE 486
+M +
Sbjct: 512 KMVD 515
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 48/290 (16%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV T+ AL+ G+ +G +K + EM G P+ S +++ R+ EA
Sbjct: 448 LSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEAN 507
Query: 303 KLWEEMRDKNVEHD-----------------------------------VVAYNTIIGGF 327
L ++M D ++ D V YN + G
Sbjct: 508 MLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGL 567
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ G++ A FF + + T+ L++G+ AG V+ A + ++M KG P
Sbjct: 568 CKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNI 627
Query: 388 STIEVLIGELCDK------RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
+T L+ LC RR+F+ L + GL P +Y LI G C+ G E
Sbjct: 628 TTYNALLNGLCKSGYLDRARRLFDKLHLK-------GLIPNVVTYNILIDGYCKSGSPRE 680
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
AL ++ +M+ +G PS+ YS+ I+G+ K+ +VE A L EM + V Q
Sbjct: 681 ALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQ 730
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 115/218 (52%)
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
+ +G + V+ M + G +P S + L++ + A ++++MR ++ D
Sbjct: 6 YAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPD 65
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
V ++ +C+ G++ RA EF REM G E ++V++ LV+GY GD++ A V
Sbjct: 66 VFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLK 125
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
M KG T+ +LI C + +V EA +L+ + G+ E +Y LI G C+
Sbjct: 126 FMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKV 185
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
GKM +A++V+ EM+ G + +L + ++ I+GY K G V
Sbjct: 186 GKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQV 223
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 151/330 (45%), Gaps = 22/330 (6%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALI--W-EVSRGKGVISGY-EIYREVFGLDSDAT 230
+KI +D++ + +RGLS V T ALI W + R S Y E+ + F +
Sbjct: 431 KKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIIC 490
Query: 231 AGIGKDVKRVVRVRPNVHTFNALMVGF----------------YREGAFEKVEDVWVEMA 274
+ I + R+ R+ + MV F R+ K+ D E A
Sbjct: 491 SKIVSSLYRLGRI-DEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESA 549
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
P+ Y++ MA C+ ++ +A + + + + D Y T+I GF G +
Sbjct: 550 IKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVN 609
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
A EM G+ + T+ L+NG C++G +D A +++ + KG P T +LI
Sbjct: 610 EAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILI 669
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
C EALD L+ +++K G+ P+ +Y LI G C++ +EEA+K+ EM
Sbjct: 670 DGYCKSGSPREALD-LRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNV 728
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ ++ +S ++G ++ G+V+ + L M
Sbjct: 729 DQTIATFSKLVEGCIQHGDVKKMSKLHNMM 758
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 2/255 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D R + + P+V T ++ + + G E+ + EM +LG E + SY+ L+ +
Sbjct: 55 DQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSL 114
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-GLSGVESSSVT 354
+ A+ + + M +K V + V +I G+C+ ++ AE+ REM GV
Sbjct: 115 GDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYA 174
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L++GYC+ G + AI V ++M + G + LI C +V E +L +
Sbjct: 175 YGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMC-M 233
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
K L P SY L+ G C +G +A V +M+ KG EP++ Y+ + G + G+
Sbjct: 234 RKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDY 293
Query: 475 EMATMLRKEMFENQV 489
+ A L M + V
Sbjct: 294 KDALRLWHLMLQRGV 308
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 7/233 (3%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
+ + AL+ G+ + G V EM ++G + + + + L+ +C+ ++ E E+L
Sbjct: 173 YAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMC 232
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
MR +++ D +Y T++ G+C G ++A +M G+E + VT+ L+ G CR GD
Sbjct: 233 MRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGD 292
Query: 368 VDSAILVYNDMCRKGFEP-EGSTIEVLIG--ELCDKRRVFEALDILKARVVKFGLFPTEK 424
A+ +++ M ++G P E +L G ++ D R D + AR + ++
Sbjct: 293 YKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIY---- 348
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
++ +I GLC+ G+M+ A + M G +P Y DGY K GNVE A
Sbjct: 349 AFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEA 401
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 81/161 (50%), Gaps = 18/161 (11%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGY-EIYREVFGLDSDATAGIGKDVKRVVRVRP 245
++++GL ++T NAL+ + + SGY + R +F D + + P
Sbjct: 618 MVNKGLVPNITTYNALLNGLCK-----SGYLDRARRLF------------DKLHLKGLIP 660
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV T+N L+ G+ + G+ + D+ +M + G P +YS L+ FC++ + EA KL
Sbjct: 661 NVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLL 720
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
EM+ NV+ + ++ ++ G + G++ + + M ++
Sbjct: 721 NEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMHMA 761
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 125/216 (57%), Gaps = 3/216 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + ++R ++ PN+ TF+AL+ F ++G K E ++ EM + +P+
Sbjct: 301 YGRWSDASRLLSDMIER--KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
++YS L+ FC R+ EA+++ E M K+ +VV YNT+I GFC+ + + E FRE
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G+ ++VT+ L++G+ +A D D+A +V+ M G P T +L+ LC +
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+ +A+ + + + + + P +Y +I+G+C+ GK
Sbjct: 479 LAKAMVVFE-YLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 120/235 (51%), Gaps = 1/235 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VRPNV T+++L+ G + + +M P+ ++S L+ F ++ ++ +AE
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL+EEM ++++ ++ Y+++I GFC + + A++ M + VT+ L+NG+
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A VD + ++ +M ++G T LI R A + K ++V G+ P
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK-QMVSVGVHPN 462
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y L+ GLC+ GK+ +A+ V + EP + Y+ I+G K G +M
Sbjct: 463 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 122/250 (48%), Gaps = 6/250 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T N+L+ GF + +M +G +PD +++ L+ + EA L
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVAL 205
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + + D+V Y ++ G C+ G+ A +M + +E++ V + +++ C+
Sbjct: 206 IDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK 265
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D A+ ++ +M KG P T LI LC+ R +A +L + +++ + P
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL-SDMIERKINPNLV 324
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY-----MKEGNVEMATM 479
++ LI ++GK+ +A K+ EM+ + +P++ YS+ I+G+ + E + M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 480 LRKEMFENQV 489
+RK+ N V
Sbjct: 385 IRKDCLPNVV 394
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 161/384 (41%), Gaps = 35/384 (9%)
Query: 125 RDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL-LIKCCLEVKNIEKIETCVDI 183
R+V+R L E D + LF V+ + S PF + K + + K + +
Sbjct: 47 REVLRTGLSDIELDDAIGLFGVMAQ------SRPFPSIIEFSKLLSAIAKMNKFDLVISF 100
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSR-----------GKGVISGYEIYREVFGLDS----- 227
+ G+S + T N LI R GK + GYE ++ L+S
Sbjct: 101 GEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYE--PDIVTLNSLLNGF 158
Query: 228 -------DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
DA A + + V+ + +P+ TF L+ G + + + M + GC+P
Sbjct: 159 CHGNRISDAVALVDQMVE--MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQP 216
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D +Y ++ C+ A L +M +E +VV Y+T+I C+ A F
Sbjct: 217 DLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 276
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
EM GV + +T+ L++ C G A + +DM + P T LI K
Sbjct: 277 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKK 336
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
++ +A + L ++K + P +Y LI G C ++ EA ++ M+ K P++
Sbjct: 337 GKLVKA-EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT 395
Query: 461 YSAFIDGYMKEGNVEMATMLRKEM 484
Y+ I+G+ K V+ L +EM
Sbjct: 396 YNTLINGFCKAKRVDKGMELFREM 419
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 115/239 (48%), Gaps = 1/239 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ NV ++ ++ + + +++ EM G P+ +YS L++ C R +A
Sbjct: 248 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDA 307
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L +M ++ + ++V ++ +I F + G++ +AE+ + EM ++ + T+ L+NG
Sbjct: 308 SRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLING 367
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C + A + M RK P T LI C +RV + +++ + + + GL
Sbjct: 368 FCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR-EMSQRGLVG 426
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y LI G + + A V +MV G P++ Y+ +DG K G + A ++
Sbjct: 427 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 485
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 114/275 (41%), Gaps = 23/275 (8%)
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFE-KVEDVWVEMARLGCE---------------- 279
V R + VR N TF L F R AF K + E+ R G
Sbjct: 13 VHRSLVVRGNAATF-PLSFSFCRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQ 71
Query: 280 ----PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
P +S L++ + + E+M + H++ YN +I FC ++
Sbjct: 72 SRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSL 131
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A +M G E VT L+NG+C + A+ + + M G++P+ T LI
Sbjct: 132 ALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIH 191
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
L + EA+ ++ R+V+ G P +Y ++ GLC+ G + AL + +M E
Sbjct: 192 GLFLHNKASEAVALID-RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE 250
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
++ IYS ID K + + A L EM VR
Sbjct: 251 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
KL+E ++K R F + LI C+ ++++ ++ +++ + V T N
Sbjct: 344 KLYEEMIK--RSIDPNIFTYSSLINGFCM----LDRLGEAKQMLELMIRKDCLPNVVTYN 397
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
LI + K V G E++RE + G N T+ L+ GF++
Sbjct: 398 TLINGFCKAKRVDKGMELFRE---MSQRGLVG-------------NTVTYTTLIHGFFQA 441
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
+ + V+ +M +G P+ +Y++L+ C+ ++ +A ++E ++ +E D+ Y
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Query: 321 NTIIGGFCEIGEMARAEEFF 340
N +I G C+ G+ +F
Sbjct: 502 NIMIEGMCKAGKWKMGGIYF 521
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 140/270 (51%), Gaps = 16/270 (5%)
Query: 231 AGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+G D R++R + PNV TF A++ F +EG F + ++ EM R +PD ++
Sbjct: 163 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 222
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+ L+ C R+ EA+++ + M K DVV YNT+I GFC+ + + FREM
Sbjct: 223 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 282
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G+ ++T+ ++ GY +AG D+A +++ R P T +L+ LC RV
Sbjct: 283 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVE 339
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+AL +L + K + +Y +I G+C+ G +E+A + + KG +P + Y+
Sbjct: 340 KAL-VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 398
Query: 465 IDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
I G+ ++ + + +L ++M QEDG
Sbjct: 399 ISGFCRKRQWDKSDLLYRKM------QEDG 422
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 118/239 (49%), Gaps = 1/239 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+++++N ++ R F V +M + G EPD + S L+ FC+ R+ +A L
Sbjct: 44 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 103
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M + DVV YNTII G C+IG + A E F M GV + +VT+ LV G C +
Sbjct: 104 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 163
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G A + DM + P T +I + + EA+ L + + + P +
Sbjct: 164 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK-LYEEMTRRCVDPDVFT 222
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI GLC G+++EA ++ MV KG P + Y+ I+G+ K V+ T L +EM
Sbjct: 223 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 281
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 113/233 (48%), Gaps = 1/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T ++L+ GF + D+ +M +G PD Y+ ++ C+ + +A +L
Sbjct: 78 PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVEL 137
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ M V D V YN+++ G C G + A R+M + + + +TF +++ + +
Sbjct: 138 FDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK 197
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G A+ +Y +M R+ +P+ T LI LC RV EA +L V K G P
Sbjct: 198 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK-GCLPDVV 256
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI G C+ +++E K+ EM +G Y+ I GY + G + A
Sbjct: 257 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 309
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 127/260 (48%), Gaps = 26/260 (10%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVR 185
VI V ++ + +KL+E + T R F ++ LI C+ +++ ++
Sbjct: 191 VIDVFVKEGKFSEAMKLYEEM--TRRCVDPDVFTYNSLINGLCMH----GRVDEAKQMLD 244
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
+++++G V T N LI + K V G +++RE+ A G+ D
Sbjct: 245 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM------AQRGLVGDTI------- 291
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
T+N ++ G+++ G + ++++ +R+ P+ +YS+L+ C R+ +A L+
Sbjct: 292 ---TYNTIIQGYFQAGRPDAAQEIF---SRMDSRPNIRTYSILLYGLCMNWRVEKALVLF 345
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E M+ +E D+ YN +I G C+IG + A + FR + G++ V++ +++G+CR
Sbjct: 346 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 405
Query: 366 GDVDSAILVYNDMCRKGFEP 385
D + L+Y M G P
Sbjct: 406 RQWDKSDLLYRKMQEDGLLP 425
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 115/243 (47%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P++ F+ ++ + ++ V ++ M G D YSY++++ C R A
Sbjct: 5 RPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIA 64
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ +M E DVV +++I GFC+ + A + +M G V + +++G
Sbjct: 65 LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 124
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G V+ A+ +++ M R G + T L+ LC R +A +++ V++ + P
Sbjct: 125 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVP 183
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
++ +I +EGK EA+K+ EM + +P + Y++ I+G G V+ A +
Sbjct: 184 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 243
Query: 482 KEM 484
M
Sbjct: 244 DLM 246
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
S V F +++ ++ + D I +++ M G + + ++I LC R AL ++
Sbjct: 9 SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 68
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+++KFG P + LI G C+ ++ +A+ + ++M GF P + IY+ IDG K
Sbjct: 69 -GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127
Query: 471 EGNVEMATMLRKEMFENQVRQE 492
G V A L M + VR +
Sbjct: 128 IGLVNDAVELFDRMERDGVRAD 149
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 160/338 (47%), Gaps = 28/338 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV----FGLDSDATA 231
K++ ++ ++ RG S NALI + + + + Y++ E+ + D+
Sbjct: 60 KVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYN 119
Query: 232 GIGKDVKRVVRVR---------------PNVHTFNALMVGFYREGAFEKVEDVW-----V 271
I + R+ +V P+V +N L+ Y+EG KV + W +
Sbjct: 120 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEG---KVAEAWGLFKTM 176
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
+MA PD +Y+ L+ FC + EA KL++++ K D V YN+I+ G
Sbjct: 177 DMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS 236
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
M AEE F++M SG + T+ +++G+CR G++ + +Y +M K F P+
Sbjct: 237 NMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCN 296
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+I LC ++V +A +L+ + K G P +Y L+ GLC+ +++A ++ + MV
Sbjct: 297 AVIDMLCKAKKVDDAHKVLE-EMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVD 355
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G P + YS ++G K V A +L M E ++
Sbjct: 356 NGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKL 393
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 162/345 (46%), Gaps = 22/345 (6%)
Query: 145 EVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
E + K + G AP + +++ V N+ + C+++ + + S V CNA+
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMAR---CLELYEEMTEKRFSPDVLLCNAV 298
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
I + + K V +++ E+ + IG P+V T+N L+ G +
Sbjct: 299 IDMLCKAKKVDDAHKVLEEM--------SKIG--------AVPDVVTYNILLDGLCKTNL 342
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
+K +++ M GC PD SYSV++ C+ ++ +A L++ M ++ + DVV +N
Sbjct: 343 VDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNI 402
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
++ G C+ G++ A++ M V VT L++G CR D A+ ++ M KG
Sbjct: 403 LMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKG 462
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF-PTEKSYMFLIKGLCEEGKMEE 441
+ +++ LC + ++ +AL K+ V G F P +Y L+ L E G++++
Sbjct: 463 TVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQ 522
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
A+ +M G G P Y+ ++G K+G A L + M E
Sbjct: 523 AVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKE 567
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 127/244 (52%), Gaps = 1/244 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T++ ++ G + G + ++ EM G PD +Y++++ C ++ EA++L
Sbjct: 8 PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADEL 67
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M ++ + VAYN +I G C+ + RA + EM G E ++T+ +++G CR
Sbjct: 68 FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCR 127
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA-RVVKFGLFPTE 423
G V A ++ M +G+ P+ L+ L + +V EA + K + + P
Sbjct: 128 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDL 187
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI G C K +EA+K+ +++ KG+ P Y++ + G ++ N++ A + K+
Sbjct: 188 ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 247
Query: 484 MFEN 487
M ++
Sbjct: 248 MVDS 251
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 3/248 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+ ++ R G ++ ++++ +M GC + +Y+ L+ C++ + A
Sbjct: 41 VNPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAY 100
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL EEM K E D + YNTI+ G C +G+++ A++FF M G V + L++
Sbjct: 101 KLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDAL 160
Query: 363 CRAGDVDSAILVYN--DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
+ G V A ++ DM + P+ T LI C + EA+ + K + K G
Sbjct: 161 YKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAK-GYM 219
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y ++ GL + M+EA ++ +MV G P+ YS + G+ + GN+ L
Sbjct: 220 PDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLEL 279
Query: 481 RKEMFENQ 488
+EM E +
Sbjct: 280 YEEMTEKR 287
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 121/242 (50%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N++++G R+ ++ E+++ +M GC P+ +YS++++ C M +L
Sbjct: 220 PDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLEL 279
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EEM +K DV+ N +I C+ ++ A + EM G VT+ L++G C+
Sbjct: 280 YEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCK 339
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
VD A +++ M G P+ + V++ LC +V +A +L R+++ L P
Sbjct: 340 TNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDAR-VLFDRMIERKLVPDVV 398
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ L+ GLC+ GK++EA + M P + + G ++ + A L + M
Sbjct: 399 TFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYM 458
Query: 485 FE 486
E
Sbjct: 459 VE 460
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 151/315 (47%), Gaps = 17/315 (5%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+EK + + + + ++++G T N+++ ++R + E+++++ +DS
Sbjct: 200 VEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKM--VDSGCA--- 254
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
PN T++ ++ G R G + +++ EM PD + ++ + C
Sbjct: 255 -----------PNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLC 303
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ +++ +A K+ EEM DVV YN ++ G C+ + +A E F M +G V
Sbjct: 304 KAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIV 363
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
++ ++NG C+ V A ++++ M + P+ T +L+ LC ++ EA D+L
Sbjct: 364 SYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDV- 422
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+ + + P + L+ GLC + + +EA+++ MV KG + ++ + G +EG
Sbjct: 423 MSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGK 482
Query: 474 VEMATMLRKEMFENQ 488
+ A + K M ++
Sbjct: 483 LAQALLFFKSMVKSD 497
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 37/179 (20%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V TFN LM G + G ++ +D+ M+ PD + + LM C ++R EA
Sbjct: 392 KLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEA 451
Query: 302 EKLWEEMRDKNV-------------------------------------EHDVVAYNTII 324
+L++ M +K DVV Y T++
Sbjct: 452 VRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLV 511
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
E G + +A ++F++M SG V + L+NG + G A + M KGF
Sbjct: 512 NALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 570
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P +Y +I GLC+ GK+ EAL++ EM KG P + Y+ +D + G V+ A
Sbjct: 5 GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64
Query: 478 TMLRKEMFE 486
L +M E
Sbjct: 65 DELFHKMIE 73
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ L+ G ++ D + +M GC PD +Y+ LM ++ R +A++L
Sbjct: 502 PDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRL 561
Query: 305 WEEMRDKNVEHD 316
+ M++K D
Sbjct: 562 TQAMKEKGFLSD 573
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 159/321 (49%), Gaps = 37/321 (11%)
Query: 203 IWEVSRGKGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
I E K + Y I + ++ DA + ++K+ + PN+ T+N+L+ G +
Sbjct: 193 IMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQK-NIPPNIFTYNSLIDGLCKL 251
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G +EKV+ + EM L P+ +++S+L+ C+E ++ +A+++ M +K VE D++ Y
Sbjct: 252 GQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITY 311
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
+ I+ G+C G++ RA F + G++ + ++ L+NGYC+ ++ A+ ++ ++ +
Sbjct: 312 SAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQ 371
Query: 381 KGFEPEGSTIEVL------IGELCDKRRVFEAL-------DILKARVVKFGLF------- 420
KG +P+ T + +G + D +++F+ + DI + FG F
Sbjct: 372 KGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEE 431
Query: 421 ------PTEKS--------YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
E++ Y +I GLC+ ++ EA + ++ G P + Y+ I
Sbjct: 432 AMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMIT 491
Query: 467 GYMKEGNVEMATMLRKEMFEN 487
G+ +EG + + ++M +N
Sbjct: 492 GFCREGLFDEVKGILRKMEDN 512
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 137/289 (47%), Gaps = 39/289 (13%)
Query: 238 KRVVRVR---PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
K++VR + PN + +M G + G EK + M + +PD +YS+++ C+
Sbjct: 156 KKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCK 215
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR------------------- 335
+ + A L EM+ KN+ ++ YN++I G C++G+ +
Sbjct: 216 DINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHT 275
Query: 336 ----------------AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
A+E R M GVE +T+ +++GYC G VD A V+N +
Sbjct: 276 FSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLR 335
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG +P + +LI C K+ + +A+ + + + GL P +Y ++ GL E G++
Sbjct: 336 DKGIKPNIFSYSILINGYCKKKNLAKAMQLF-GEISQKGLKPDTVTYSTILHGLIEVGRI 394
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+A K+ EM+ G P + ++S + GY K G VE A +L ++ N+
Sbjct: 395 GDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNR 443
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 36/279 (12%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ + PNVHTF+ L+ G +EG E ++V M G EPD +YS +M +C ++
Sbjct: 267 LNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDR 326
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +++ +RDK ++ ++ +Y+ +I G+C+ +A+A + F E+ G++ +VT+ +++
Sbjct: 327 ARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILH 386
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEP--------------------------------EGS 388
G G + A ++++M R G P E +
Sbjct: 387 GLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDT 446
Query: 389 TIE---VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
I V+I LC RV EA I + ++ GL P ++Y +I G C EG +E +
Sbjct: 447 NISFYTVVINGLCKNDRVREAHAIFE-KLPSIGLIPDVRTYNVMITGFCREGLFDEVKGI 505
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+M G + Y+ + G+ + + KEM
Sbjct: 506 LRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEM 544
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 8/251 (3%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLG----CEPDCYSYSVLMAVFCEERRMREA 301
NV TFN L+ G + E KV D V +L CEP+ Y +M + +
Sbjct: 131 NVVTFNTLLGGLFAE---NKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKT 187
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L M N + DV Y+ +I C+ + A EM + + T+ L++G
Sbjct: 188 LSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDG 247
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G + + ++M P T +LI LC + +V +A ++++ + K G+ P
Sbjct: 248 LCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEK-GVEP 306
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y ++ G C G+++ A +V + KG +P++ YS I+GY K+ N+ A L
Sbjct: 307 DIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLF 366
Query: 482 KEMFENQVRQE 492
E+ + ++ +
Sbjct: 367 GEISQKGLKPD 377
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 4/257 (1%)
Query: 239 RVVRVRP--NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
R+VR++P +V F+ L + V ++ EM LG +++ +C
Sbjct: 52 RMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRH 111
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV-ESSSVTF 355
R+ A + + +VV +NT++GG ++ A F+++ + E + V +
Sbjct: 112 RIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMY 171
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
++NG + G + + + M + +P+ T ++I LC + A+++L
Sbjct: 172 GTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQ 231
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K + P +Y LI GLC+ G+ E+ + +EMV P++ +S IDG KEG VE
Sbjct: 232 K-NIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVE 290
Query: 476 MATMLRKEMFENQVRQE 492
A + + M E V +
Sbjct: 291 DADEVMRHMIEKGVEPD 307
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 80/153 (52%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ + L+ G+++ G E+ ++ ++ R + + Y+V++ C+ R+REA +
Sbjct: 411 PDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAI 470
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E++ + DV YN +I GFC G + R+M +G ++++T+ ++ G+ R
Sbjct: 471 FEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFR 530
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+ + + +M +GF + +T VLI L
Sbjct: 531 SNKISEIVSFMKEMAGRGFSFDATTTGVLINVL 563
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%)
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ +A L+ M V+ ++ + + + FREM + G+ S
Sbjct: 43 LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
+ N YC +D A V + G T L+G L + +V +A+ + K V +
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P E Y ++ GL + G E+ L + M +P + YS ID K+ N++ A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222
Query: 478 TMLRKEMFENQV 489
L EM + +
Sbjct: 223 INLLNEMKQKNI 234
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 130/242 (53%), Gaps = 2/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V F+A + G ++G E+ +V++EM R G P+ ++Y+ L+ FC+ ++ EA KL
Sbjct: 579 PDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKL 638
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ MR + + D+ N IIGG C+ G M A F +M +G+ +T+ L+NGYC+
Sbjct: 639 EKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCK 698
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A D+ +A + N M G P+ +T + I C RR+ A+ +L +V G+ P
Sbjct: 699 AFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLD-ELVSAGIVPNTV 757
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y ++ G+C + ++ A+ + A ++ F P++ + + + K+G E M ++
Sbjct: 758 TYNSMLNGVCSD-ILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKL 816
Query: 485 FE 486
E
Sbjct: 817 SE 818
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 128/250 (51%), Gaps = 15/250 (6%)
Query: 231 AGIGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
+ K K V+R +P +TF+ +++GF R+G E + M + CEP+ ++Y+++
Sbjct: 248 GNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIV 307
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ C R +A + M ++ VV +NT+I FC+ G + A + F + G
Sbjct: 308 INACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGF 367
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRR 402
+++ + L+NGY + ++D A ++Y +M +KG P+G T +L+ G D R
Sbjct: 368 SPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDR 427
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ + + +L GL P + + GLC G+++EA++ +M+ KG PS+ ++
Sbjct: 428 LLKDISVL-------GLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFN 480
Query: 463 AFIDGYMKEG 472
+ I Y + G
Sbjct: 481 SVIAAYSQAG 490
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 151/342 (44%), Gaps = 27/342 (7%)
Query: 153 ECGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
C F ++++I CC+ + + + +++ RG + V T N +I +
Sbjct: 296 HCEPNAFAYNIVINACCIRGRTSDALAW----FNLMIERGCNPTVVTFNTVINAFCKEGN 351
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
V+ +++ D +G PN +N LM G+ + ++ ++
Sbjct: 352 VVEARKLF--------DGLKEMG--------FSPNAIMYNTLMNGYVKMREIDQANMLYE 395
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM + G PD ++++L++ + R + ++L +++ + D ++ + G C G
Sbjct: 396 EMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAG 455
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A EF +M G+ S + F ++ Y +AG D A Y M G P ST
Sbjct: 456 RLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCS 515
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
L+ L R+ EA +++ ++++ GL ++ L+ + G + A + EM
Sbjct: 516 SLLMGLSINGRLQEATELI-GQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMER 574
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMA-----TMLRKEMFENQ 488
+G P + +SAFIDG K+G VE A MLRK + N
Sbjct: 575 RGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNN 616
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 143/311 (45%), Gaps = 21/311 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATAGI 233
+++ ++ + ++ +GLS + N++I S+ +E Y+ + FGL
Sbjct: 456 RLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLT------- 508
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
P+ T ++L++G G ++ ++ +M G + +++VL+ F
Sbjct: 509 -----------PSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFF 557
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + A+ LW EM + + DVVA++ I G + G + A F EM G+ ++
Sbjct: 558 KRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNF 617
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
+ L+ G+C+ G ++ A+ + M +G P+ T ++IG LC + R+ A+++
Sbjct: 618 AYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVF-MD 676
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+ + GL P +Y LI G C+ M A + M G P L Y+ I G+
Sbjct: 677 MHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRR 736
Query: 474 VEMATMLRKEM 484
+ A ++ E+
Sbjct: 737 MNRAVLMLDEL 747
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 177/400 (44%), Gaps = 37/400 (9%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND--PKLKLFEVLVKTYRECGSAPF 159
K ++ +Y I +L RA G + R+ R ++ P + + VL+ G
Sbjct: 261 KPNIYTYTICIRVLGRA---GRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDD 317
Query: 160 VFDLLIKC---------CLEVKNIEKIETCVDIVRM------LMSRGLSVKVSTCNALIW 204
+L +K + ++K C D+ R+ + + G + V T L+
Sbjct: 318 AMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVN 377
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ + + + + DV R V PN+HT+N L+ G R +
Sbjct: 378 ALCKAGNIDEAFHLL----------------DVMRKQGVLPNLHTYNTLISGLLRVNRLD 421
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
D++ M LG P Y+Y + + + + R +A + +E+M+ + + ++VA N +
Sbjct: 422 DALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASL 481
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
E+G + A+ F + +G+ SVT+ ++ Y +AG VD AI + +DM E
Sbjct: 482 YSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCE 541
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P+ I LI L RV EA + R+ L PT +Y LI GL +EG+++ A++
Sbjct: 542 PDIIVINSLINTLYKAGRVDEAWKMF-CRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAME 600
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ A M G G P+ ++ +D K V++A + +M
Sbjct: 601 LFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKM 640
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 131/277 (47%), Gaps = 36/277 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P + ++N L+ GF E +++ EM GC PD ++Y++L+ + ++ E
Sbjct: 786 VKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELF 845
Query: 303 KLWEEM-----RDKNVEHDVV------------------------------AYNTIIGGF 327
+L+E+M + + H+++ Y ++ G
Sbjct: 846 ELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGL 905
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
+ G + A+E F EM G ++ + L+NG+ + GDV++A ++ M R+G P+
Sbjct: 906 LKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDL 965
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+ L+G LC+ RV +AL + ++ + GL+ +Y +I GL ++EEAL +
Sbjct: 966 KSYTSLVGCLCEAGRVDDALHYFE-KLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYD 1024
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
EM +G P L Y++ I G VE A L +E+
Sbjct: 1025 EMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEEL 1061
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 121/237 (51%), Gaps = 6/237 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN++T+ + R G ++ + M GC PD +Y+VL+ C ++ +A
Sbjct: 260 LKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAM 319
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ +M+ + + D V Y T++ F + G++ R +EF+ EM G +TF LVN
Sbjct: 320 ELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNAL 379
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+AG++D A + + M ++G P T LI L R+ +ALD+ + G+ PT
Sbjct: 380 CKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFN-NMETLGVVPT 438
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL-----EIYSAFIDGYMKEGNV 474
+Y+ I + G+ ++AL+ +M +G P++ +YS G ++E V
Sbjct: 439 AYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKV 495
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 153/344 (44%), Gaps = 28/344 (8%)
Query: 146 VLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
V ++ +E G P + ++ LI+ L V N E ++ + + G + V T N L+
Sbjct: 776 VFIRFTKELGVKPTLESYNFLIEGFLGVHNDE---MAWNLFTEMKNAGCAPDVFTYNLLL 832
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
+ + +E+Y ++ +PN T N ++ + +
Sbjct: 833 DAHGKSGKINELFELYEQMI----------------CSSCKPNTITHNIIIANLVKSNSL 876
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
+K D++ ++ P +Y L+ + R+ EA++L+EEM D + YN +
Sbjct: 877 DKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNIL 936
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I GF + G++ A E F+ M G+ ++ LV C AG VD A+ + + + G
Sbjct: 937 INGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGL 996
Query: 384 EPEGSTIEVLIGELCDKRRVFEAL---DILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
+ ++I L R+ EAL D +++R G+ P +Y LI L G +E
Sbjct: 997 YLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSR----GINPDLFTYNSLILNLGVAGMVE 1052
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+A K+ E+ G EP++ Y+A I GY GN + A + K M
Sbjct: 1053 QAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRM 1096
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 124/261 (47%), Gaps = 18/261 (6%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
RG++ + CNA ++ ++ + I+ L S+ A P+ T
Sbjct: 468 RGIAPNIVACNASLYSLAEMGRLREAKVIFNR---LKSNGLA-------------PDSVT 511
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N +M + + G ++ ++ +M+ CEPD + L+ + R+ EA K++ ++
Sbjct: 512 YNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLK 571
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
D + VV YNT+I G + G++ RA E F M +G +++TF +++ C+ +VD
Sbjct: 572 DMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVD 631
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A+ + M P+ T +I L ++RV +A+ + +K L P + L
Sbjct: 632 LALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQ--MKKMLTPDCVTLCTL 689
Query: 430 IKGLCEEGKMEEALKVQAEMV 450
+ G+ + G ME+A K+ + V
Sbjct: 690 LPGVVKNGLMEDAFKIAEDFV 710
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 5/222 (2%)
Query: 275 RLGCEPDCYSYSVLMA---VFCEERRMREAEKLWEEM-RDKNVEHDVVAYNTIIGGFCEI 330
RL C C SVLM V C+ ++ A+ ++ ++ V+ + +YN +I GF +
Sbjct: 744 RLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGV 803
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
A F EM +G T+ L++ + ++G ++ +Y M +P T
Sbjct: 804 HNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITH 863
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
++I L + +ALD+ +V PT +Y L+ GL + G++EEA ++ EMV
Sbjct: 864 NIIIANLVKSNSLDKALDLF-YDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMV 922
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
G P+ IY+ I+G+ K G+V A L K M +R +
Sbjct: 923 DYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPD 964
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 105/267 (39%), Gaps = 36/267 (13%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +++N L+ + G + +++ M G +P ++S LM + R + L
Sbjct: 193 NAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLL 252
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EEM ++ ++ Y I G + A + M G VT+ L++ C A
Sbjct: 253 EEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTA 312
Query: 366 GDVDSAILVY-----------------------------------NDMCRKGFEPEGSTI 390
G +D A+ ++ ++M G+ P+ T
Sbjct: 313 GKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITF 372
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+L+ LC + EA +L + K G+ P +Y LI GL ++++AL + M
Sbjct: 373 TILVNALCKAGNIDEAFHLLDV-MRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNME 431
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P+ Y FID Y K G + A
Sbjct: 432 TLGVVPTAYTYILFIDFYGKSGRSDKA 458
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 155/387 (40%), Gaps = 51/387 (13%)
Query: 17 KPKPQLLSQ-----FSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTP 71
K K L++Q F+ P+ +S+N + + L H + WN + +G P
Sbjct: 766 KHKQALVAQSVFIRFTKELGVKPTLESYNFL--IEGFLGVHNDEMAWNLFTEMKNAGCAP 823
Query: 72 TQFS-QIALGLKNNPHLALRFFSFTQHK--SLCKHSLSSYATIIHILSRARLIGPARDVI 128
F+ + L F + S CK + TI H + A L+
Sbjct: 824 DVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPN-----TITHNIIIANLV------- 871
Query: 129 RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLM 188
+S D L LF LV + P + L+ L+ +E+ + ++ ++
Sbjct: 872 ----KSNSLDKALDLFYDLVSG--DFSPTPCTYGPLLDGLLKSGRLEEAK---ELFEEMV 922
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR--VRPN 246
G + N LI + V + E++ KR+VR +RP+
Sbjct: 923 DYGCRPNNAIYNILINGFGKTGDVNTACELF------------------KRMVREGIRPD 964
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ ++ +L+ G + + ++ + G D +Y++++ R+ EA L++
Sbjct: 965 LKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYD 1024
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
EM+ + + D+ YN++I G + +A + + E+ G+E + T+ L+ GY +G
Sbjct: 1025 EMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSG 1084
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVL 393
+ DSA VY M G P T L
Sbjct: 1085 NSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 109/245 (44%), Gaps = 7/245 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ +++T+ + G + G + + +M G + YSY+ L+ + + REA
Sbjct: 155 IKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREAL 214
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ M + ++ + ++ ++ + + + EM G++ + T+ +
Sbjct: 215 EMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVL 274
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVKFGL 419
RAG +D A + M G P+ T VLI LC ++ +A+++ +KA K
Sbjct: 275 GRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHK--- 331
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y+ ++ + G + + +EM G+ P + ++ ++ K GN++ A
Sbjct: 332 -PDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFH 390
Query: 480 LRKEM 484
L M
Sbjct: 391 LLDVM 395
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 198/472 (41%), Gaps = 82/472 (17%)
Query: 79 LGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND 138
L L P AL+FF++ H+ SY ++ IL RAR + AR+ + R
Sbjct: 93 LRLIKTPSKALQFFNWAPELGFT-HNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGT 151
Query: 139 PKL--KLFEVLVKTY----------------RECGSAPFV--FDLLIKCCLEVKNIEKIE 178
KL + F L+++Y + G +P V F+ L+ L+ +
Sbjct: 152 VKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQ 211
Query: 179 TCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK 238
+ D ML + G++ T N LI + V G+ ++E+ D
Sbjct: 212 SVFD--EMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCD---------- 259
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR--LGCEPDCYSYSVLMAVFCEER 296
P++ T+N L+ G R G +V M + PD +Y+ L+ +C +
Sbjct: 260 ------PDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKH 313
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR-EMGLSGVESSSVTF 355
+ EA ++EEM K ++ + + YNT+I G CE+ ++ + ++ F +G G + T
Sbjct: 314 EIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTL 373
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK------RRVFEALDI 409
L+N +C AG+++ A+ V+ M P+ +T VLI LC + ++F+ L
Sbjct: 374 NTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSE 433
Query: 410 LKARVVKFGLFPTEKSY--MF--------------------------------LIKGLCE 435
+ + G P +Y MF LIKG C
Sbjct: 434 KEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPLSFKILIKGHCR 493
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
EG E ++ M+ + F P LE Y + IDG +++G +A ++M ++
Sbjct: 494 EGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKS 545
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 3/258 (1%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM-ARLGCEPDCYSYSVLMAVFCEERR 297
+ V V P+V TFN+L++ + G + V+ EM + G PD Y++++L+ FC+
Sbjct: 183 KSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSM 242
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM--GLSGVESSSVTF 355
+ E + ++EM + D+V YNT++ G C G++ A M + + VT+
Sbjct: 243 VDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTY 302
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
LV GYC ++D A++V+ +M KG +P T LI LC+ +++ + I + +
Sbjct: 303 TTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALG 362
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G P + L+ C G + +AL+V +M+ P YS I + GN E
Sbjct: 363 GGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFE 422
Query: 476 MATMLRKEMFENQVRQED 493
A L E+ E ++ D
Sbjct: 423 RAEQLFDELSEKEILLRD 440
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 186/436 (42%), Gaps = 52/436 (11%)
Query: 21 QLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQ--FSQIA 78
Q+ + + +P ++L+ ++ + ++S ++ +LS G+TP F+ +
Sbjct: 177 QVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLST--YGVTPDTYTFNILI 234
Query: 79 LGLKNNPHL--ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPE 136
G N + RFF + C L +Y T++ L RA + A +V+ ++
Sbjct: 235 RGFCKNSMVDEGFRFFK-EMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKST 293
Query: 137 N-DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
N +P + + LV+ Y C++ +I+ + + ++S+GL
Sbjct: 294 NLNPDVVTYTTLVRGY----------------CMK----HEIDEALVVFEEMVSKGLKPN 333
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
T N LI +G + + +++F + G G + P+ T N LM
Sbjct: 334 EITYNTLI----KGLCEVQKIDKIKQIF----EGALGGGGFI-------PDTCTLNTLMN 378
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM------- 308
G +V+ +M L PD +YSVL+ C+ AE+L++E+
Sbjct: 379 AHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILL 438
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
RD V AY ++ C G+ A+AE FR++ G + ++F+ L+ G+CR G
Sbjct: 439 RDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDP-LSFKILIKGHCREGTF 497
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
++ + M R+ F P+ T + LI L K A L+ +++K P ++
Sbjct: 498 EAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLE-KMIKSSHVPETSTFHS 556
Query: 429 LIKGLCEEGKMEEALK 444
++ L +G E+ +
Sbjct: 557 ILARLLAKGCAHESAR 572
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 91/241 (37%), Gaps = 14/241 (5%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+F L+ G REG FE ++ V M R PD +Y L+ ++ A + E+M
Sbjct: 483 SFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKM 542
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + +++I+ G + F M + + H V +G
Sbjct: 543 IKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGSGLR 602
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL-----KARVVKFGLFPTE 423
D A + + G+ + +E LIG L R+ A +L K + V + T
Sbjct: 603 DKAFKIVGLLYANGYVVD---MEELIGFLSHNRKFLLAHKLLLFCLEKHQNVDIDMCDT- 658
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+I+GLC+ + EA + E+V KG L G +E L K
Sbjct: 659 -----VIEGLCKMKRHSEAFGLYYELVEKGNNQPLRCLENLRVALEARGRLEEVKFLSKR 713
Query: 484 M 484
M
Sbjct: 714 M 714
>gi|359488297|ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Vitis vinifera]
Length = 547
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 186/420 (44%), Gaps = 27/420 (6%)
Query: 69 LTPTQFSQIALGLKN--NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARD 126
LT + ++ L LK + AL FF ++ +H L+SY IHIL A+L+ A+
Sbjct: 66 LTESFVGRVLLELKKPIDAKQALGFFHWSAQCKNLEHGLASYCITIHILVGAQLLMDAQS 125
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
++ L+ + + + L+ +Y GS P VFDLL++ + E C D+
Sbjct: 126 LLESTLKKNAGS-RFLVVDSLLSSYNITGSNPRVFDLLVQ---SYSKLRMFEICFDVCCY 181
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVR-- 244
L G S+ + + N L+ V + SD + K + ++RVR
Sbjct: 182 LEEHGFSLSLISFNTLLHVVQK------------------SDNYPLVWKIYEHMIRVRKY 223
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN + + ++ +EGA +K D+ + C P + ++ EE R+ + +
Sbjct: 224 PNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLI 283
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + KN+ D ++Y+ I + G + A E + EM G ++ + + +C
Sbjct: 284 LKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCV 343
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G ++ A + DM G P T +LI R+ E L + + R+++ GL P+
Sbjct: 344 EGRIEEANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCE-RMMQRGLVPSCW 402
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ + LCE G ++ A ++ ++ KGF P YS I Y K G ++ L EM
Sbjct: 403 AFNLMAGKLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEM 462
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 131/300 (43%), Gaps = 25/300 (8%)
Query: 163 LLIKCCLEVKNIE--KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
+++ C+ + +E ++E + I++ L+ + + + + + + + + + S +E+Y
Sbjct: 261 VIVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYE 320
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
E+ PN + + EG E+ ++ +M G P
Sbjct: 321 EMLNRG----------------FHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMP 364
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
++++L+A + R+ E +L E M + + A+N + G CE G + RA+E
Sbjct: 365 YDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAGKLCESGVVKRADEML 424
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
+ G +T+ +L+ Y + G++ + +Y +M + P E LI LC
Sbjct: 425 TLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYRSLSPGLLAFESLIRSLCQC 484
Query: 401 RRVFEA---LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
R++ +A L I+K R + + Y LI E+G A ++ EMV +G +PS
Sbjct: 485 RKLEKAEKYLRIMKDRSIAI----STCVYETLISSYFEKGDELRASQLHNEMVSRGLKPS 540
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 74/144 (51%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ FN + G ++ +++ + G PD +YS L+A + + +++ KL
Sbjct: 399 PSCWAFNLMAGKLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKL 458
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM +++ ++A+ ++I C+ ++ +AE++ R M + S+ +E L++ Y
Sbjct: 459 YYEMEYRSLSPGLLAFESLIRSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLISSYFE 518
Query: 365 AGDVDSAILVYNDMCRKGFEPEGS 388
GD A ++N+M +G +P S
Sbjct: 519 KGDELRASQLHNEMVSRGLKPSCS 542
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 21/213 (9%)
Query: 147 LVKTYRECGSAPF--VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
L++ G P+ F+LLI C ++E + + +M RGL V +C A +
Sbjct: 353 LMQDMENAGLMPYDETFNLLIAGC---SKAGRLEEGLRLCERMMQRGL---VPSCWA--F 404
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ GK SG V D T + K P+ T++ L+ + + G +
Sbjct: 405 NLMAGKLCESGV-----VKRADEMLTLLLDKGFV------PDEITYSNLIASYGKLGEIQ 453
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+V ++ EM P ++ L+ C+ R++ +AEK M+D+++ Y T+I
Sbjct: 454 QVLKLYYEMEYRSLSPGLLAFESLIRSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLI 513
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ E G+ RA + EM G++ S H
Sbjct: 514 SSYFEKGDELRASQLHNEMVSRGLKPSCSYMVH 546
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 3/241 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V+T+ A++ E + EMA P+ +Y+VL+ C+ R+ EA L
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+MR K V V YN++I G C+ + A + EM SG T+ L+ G+C+
Sbjct: 104 LSKMRKKCVPT-AVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG-LFPTE 423
+ D A+ V+ + +GF P+ T LI LC + R+ EA+D+ R++K G P
Sbjct: 163 SKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLF-GRMIKSGSCMPNT 221
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI G C GKM+EA+ + M G P + Y+ ++G+ K ++ A L +
Sbjct: 222 VTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQ 281
Query: 484 M 484
M
Sbjct: 282 M 282
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 4/244 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEERRMREAE 302
RP+V T++ L+ G +EG ++ D++ M + G C P+ +Y+ L++ FC +M EA
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 241
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L E M + DVV Y T++ GFC++ + A + +M G+ VTF L++G
Sbjct: 242 NLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGL 301
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR + A+ + +M RK P T ++ C ++ EA + + + P
Sbjct: 302 CRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM---LEEMDCPPN 358
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
S+ +I+GLC+ + EA+++ E + P + +Y+ IDG +E V+ A + +
Sbjct: 359 VVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYR 418
Query: 483 EMFE 486
+M E
Sbjct: 419 KMLE 422
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 2/210 (0%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C D +Y+ L+ C+ +R+ +A +M K DV Y +I C + A
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+F EM + + VT+ L++G C+ G VD A+ + + M RK P T LI L
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGL 125
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C R EA D+L+ +V G P +Y LI G C+ K ++AL+V ++V +GF P
Sbjct: 126 CKAERASEAYDLLE-EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ YS IDG KEG ++ A L M ++
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKS 214
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N+L+ GF R G ++ ++ MA G PD +Y+ LM FC+ R+ +A L
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M K + DVV + +++ G C ++ A EM + T+ +++GYCR
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 338
Query: 365 AGDVDSA-------------ILVYNDMC--------------------RKGFEPEGSTIE 391
A ++ A ++ +N M R+ P+
Sbjct: 339 ANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYT 398
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+I LC +++V EA + + + + G P +Y L+ GLC G ++ A +
Sbjct: 399 TVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA----RGYIE 454
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
KG P++ Y+ ID + K E A L +M +
Sbjct: 455 KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 33/241 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ LM GF + + D+ +M R G PD +++ LM C E R+ +A +
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EMR K+ V YNTI+ G+C ++ A +F E + V+F ++ G C+
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEE--MDCPPNVVSFNIMIRGLCK 371
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A+ + + R+ P+ +I LC +++V EA + + + + G P
Sbjct: 372 VNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSI 431
Query: 425 SYMFLIKGLCEEGKM-------------------------------EEALKVQAEMVGKG 453
+Y L+ GLC G + E+A ++ +MV +G
Sbjct: 432 TYSTLVTGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
Query: 454 F 454
F
Sbjct: 492 F 492
>gi|356499705|ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Glycine max]
Length = 500
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 169/409 (41%), Gaps = 53/409 (12%)
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL 143
NP L FF +T + HS S T+++IL R+R+ G +++ A R + +
Sbjct: 79 NPSQTLEFFRYTGRRKGFYHSSFSLDTMLYILGRSRMFGQVWELLIEARRKDQTAITART 138
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
V V + K C + +E +V+ + NAL+
Sbjct: 139 VMV-------------VLGRIAKVCSVRQTVESFRKFRKLVQ-------EFDTNCFNALL 178
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
+ + K + +Y + R RPN+ TFN L+ G+
Sbjct: 179 RTLCQEKSMADARNVYHSL-----------------KHRFRPNLQTFNILLSGWKTP--- 218
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
E + + EM +G PD +Y+ LM V+C+ R + +A K+ +EMRD++ DV+ Y I
Sbjct: 219 EDADLFFKEMKEMGVTPDVVTYNSLMDVYCKGREIEKAYKMLDEMRDQDFSPDVITYTCI 278
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
IGG IG+ +A +EM G + + + +C A + A + +M KG
Sbjct: 279 IGGLGLIGQPDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGLVEEMVTKGL 338
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKA------RVVKFGLFPTEKSYMFLIKGLCEEG 437
P +T + RVF + L++ R++ G P +S MFLI+
Sbjct: 339 SPNATTYNLFF-------RVFYWSNDLQSSWNMYQRMMVEGCLPNTQSCMFLIRLFRRHE 391
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
K+E AL+ +MV KGF + D G +E A EM E
Sbjct: 392 KVEMALQFWGDMVEKGFGSYTLVSDVLFDLLCDMGKLEEAEKCFLEMVE 440
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 118/288 (40%), Gaps = 40/288 (13%)
Query: 98 KSLCKH-SLSSYATIIHILS-RARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECG 155
++LC+ S++ + H L R R +++ ++PE+ ++ K +E G
Sbjct: 179 RTLCQEKSMADARNVYHSLKHRFRPNLQTFNILLSGWKTPEDA------DLFFKEMKEMG 232
Query: 156 SAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVI 213
P V ++ L+ + + IEK +D +R + S V T +I G G+I
Sbjct: 233 VTPDVVTYNSLMDVYCKGREIEKAYKMLDEMR---DQDFSPDVITYTCIIG----GLGLI 285
Query: 214 SGYEIYREV------FGLDSDATAG--------IGK---DVKRVVR------VRPNVHTF 250
+ R V +G DA A I K D +V + PN T+
Sbjct: 286 GQPDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGLVEEMVTKGLSPNATTY 345
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
N FY + +++ M GC P+ S L+ +F ++ A + W +M +
Sbjct: 346 NLFFRVFYWSNDLQSSWNMYQRMMVEGCLPNTQSCMFLIRLFRRHEKVEMALQFWGDMVE 405
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
K + + + C++G++ AE+ F EM G + S V+F +
Sbjct: 406 KGFGSYTLVSDVLFDLLCDMGKLEEAEKCFLEMVEKGQKPSHVSFRRI 453
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 180/390 (46%), Gaps = 39/390 (10%)
Query: 125 RDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIV 184
+ +I V RS L+LF+ + Y A F+ L+ C TC +++
Sbjct: 146 QQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSC-----------TCANLL 194
Query: 185 ---RMLMSR----GLSVKVSTCNALIWE-VSRGK--GVISGYE--IYREVFGLDSDATAG 232
L+S+ G V+ N L+ + RG+ V++ +E I ++ D +
Sbjct: 195 DASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNV 254
Query: 233 IGKDVKRVVRVR---------------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
+ K V RV +V+ P+ T N ++ G R + +V + R G
Sbjct: 255 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDG 314
Query: 278 -CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
C P+ +++ +++ +C+ ++ +A ++ +M + + V YN +I G+ ++G++ A
Sbjct: 315 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 374
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
E +++M VTF L++GYCR G +D A+ +++DM + +P T ++I
Sbjct: 375 VEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHS 434
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC + R EA+ +L ++ + P Y +I LC+ GK++EA ++ M KG P
Sbjct: 435 LCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRP 494
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
Y+ I GY + + A M EM E
Sbjct: 495 DKYTYTILIIGYCMKSRISEAIMFFHEMVE 524
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 129/250 (51%), Gaps = 3/250 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM-REAEK 303
P+V +FN ++ G R G +K ++ M GC PD ++++++ C + R E
Sbjct: 247 PDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEV 306
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L RD +VV + ++I G+C+ G++ A + +M SG+ ++VT+ L+NGY
Sbjct: 307 LRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYG 366
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ GD+ SA+ VY M R P+ T LI C ++ +AL I + + + + P
Sbjct: 367 KVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIW-SDMAQHRIQPNV 425
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEM-VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ +I LC++ + +EA+++ E+ + P IY+ ID K G V+ A ++RK
Sbjct: 426 YTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRK 485
Query: 483 EMFENQVRQE 492
M E R +
Sbjct: 486 GMEEKGCRPD 495
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 189/420 (45%), Gaps = 31/420 (7%)
Query: 61 LLSLCRSGLTPTQ---FSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSR 117
++ LCRSG F Q+ +P RF SF C + L + AT++ S
Sbjct: 149 IVVLCRSGRQADALQLFDQMTTHYGYSPDA--RFLSFLVSSCTCANLLDASATLLSKASE 206
Query: 118 --ARLIGPARDVIRVAL--RSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKN 173
R+ A + + +L R +D + LFE ++ R + F+++IK V
Sbjct: 207 FGCRVEAYAYNKLMSSLIGRGRVHD-VVALFERWIQD-RLYSPDVWSFNVVIKGVCRVGQ 264
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
++K +++V + G S T N ++ + R V G+E+ R +
Sbjct: 265 VQKA---LELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRL----------- 310
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
+R PNV TF +++ G+ + G E V+ +M G P+ +Y+VL+ +
Sbjct: 311 ----QRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYG 366
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + A +++++M DVV ++++I G+C G++ A + +M ++ +
Sbjct: 367 KVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVY 426
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDM-CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
TF +++ C+ D AI + N++ R P+ +I LC +V EA ++++
Sbjct: 427 TFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEA-NLIRK 485
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ + G P + +Y LI G C + ++ EA+ EMV G P + FI +K G
Sbjct: 486 GMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAG 545
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 122/244 (50%), Gaps = 1/244 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N L+ GF GA + +W M + G P+ S S L+ F + + +A LW+E
Sbjct: 377 TYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKET 436
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + +VV NT+I G C+ M AEE F M S+T+ L++GYC+ GD+
Sbjct: 437 LARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDL 496
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A + +M GF P I L ++ + DI + + GL P +Y
Sbjct: 497 GRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDI-RVEMSAKGLSPNTVTYGA 555
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI G C+EG + +A + EMV KG +P+L I S + + +EG V+ A ++ +++ +
Sbjct: 556 LIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTD 615
Query: 489 VRQE 492
+ Q+
Sbjct: 616 MIQD 619
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 195/423 (46%), Gaps = 36/423 (8%)
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL 143
+P AL F C+ SL ++A ++HIL+ AR AR ++ L + P L
Sbjct: 26 DPDAALHLFRLAP----CRPSLLAHAQLLHILAHARRFPAARALLASLLSAHSVAPTL-- 79
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
F LV+ Y++ + FDLL++ + ++ D + SR + +CN L+
Sbjct: 80 FPDLVEVYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSR---RTLRSCNRLL 136
Query: 204 WEVSRGKGVISGYEIYREV---FGLDSDATAGI-GKDVKRVVRVRP-------------- 245
++ + + + +++++ L D T I K R RV
Sbjct: 137 NQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLD 196
Query: 246 -NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
N+ ++A+M G+ R G E + + G P+ +Y++L+ +C+E RM EAEK+
Sbjct: 197 VNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKV 256
Query: 305 WEEMR-DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+E++ ++ + D VAY +I G+C+ G M A EM +GV+ + + ++NGYC
Sbjct: 257 VKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYC 316
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK---RRVFEALDILKARVVKFGLF 420
+ G + + +G + + L+ C K + FE D++ V+ G
Sbjct: 317 KLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMM----VRNGFT 372
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
T +Y L+ G C G +++ALK+ M+ +G P+ S +DG+ K G E A L
Sbjct: 373 GTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNL 432
Query: 481 RKE 483
KE
Sbjct: 433 WKE 435
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 132/303 (43%), Gaps = 62/303 (20%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN T+ AL+ G+ +EG ++ EM G +P+ + SVL++ F E ++ EA
Sbjct: 546 LSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEAN 605
Query: 303 KLWEEMRDKNVEHDVVA--------------------------YNTIIGGFCEIGEMARA 336
+ +++ D ++ D A +N +I G C++G +A A
Sbjct: 606 LVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADA 665
Query: 337 EEFFREMGLSG-----------------------------------VESSSVTFEHLVNG 361
F ++ + G + + VT+ L+ G
Sbjct: 666 RNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYG 725
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C++ +V A+ ++N + KG P T LI C EA LK +++K G+ P
Sbjct: 726 LCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFK-LKQKMIKEGIQP 784
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
T +Y LI GLC +G MEEA+K+ +M+ +P+ Y I GY + GN++ T L
Sbjct: 785 TVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLY 844
Query: 482 KEM 484
EM
Sbjct: 845 NEM 847
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 123/250 (49%), Gaps = 1/250 (0%)
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
K++K ++ + + AL+ G+ + G E V EM G + + + Y+ ++ +C+
Sbjct: 258 KEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCK 317
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
RM E EKL + + V D +YNT++ G+C G M +A E M +G +++T
Sbjct: 318 LGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLT 377
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+NG+C G +D A+ ++ M ++G P + L+ + +AL++ K +
Sbjct: 378 YNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETL 437
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ GL + +I GLC+ +M EA ++ M Y IDGY K G++
Sbjct: 438 AR-GLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDL 496
Query: 475 EMATMLRKEM 484
AT +R EM
Sbjct: 497 GRATQIRIEM 506
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 136/303 (44%), Gaps = 60/303 (19%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN + + L+ GF++ G E+ ++W E G + + + ++ C+ RRM EAE
Sbjct: 406 VVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAE 465
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE---------------EFFR------ 341
+L+ M++ + D + Y T+I G+C++G++ RA E F
Sbjct: 466 ELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGL 525
Query: 342 --------------EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
EM G+ ++VT+ L+ G+C+ G++ A ++Y +M KG +P
Sbjct: 526 FIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNL 585
Query: 388 STIEVLIGELCDKRRVFEALDILK---------------------ARVVKFGLFPTEKS- 425
VL+ + +V EA +L+ A +++ +S
Sbjct: 586 FICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSA 645
Query: 426 ---YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ +I GLC+ G++ +A + ++ KGF P YS+ I G G++++A LR
Sbjct: 646 KIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRD 705
Query: 483 EMF 485
EM
Sbjct: 706 EML 708
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 162/361 (44%), Gaps = 48/361 (13%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV----FGLDS---- 227
K E +++ + ++RGL+ V T N +I + + + + E++ + DS
Sbjct: 425 KTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYR 484
Query: 228 ---DATAGIGKDVKRVVRVR---------PNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
D +G D+ R ++R P+V FN+ + G + KV D+ VEM+
Sbjct: 485 TLIDGYCKLG-DLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSA 543
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G P+ +Y L+A +C+E + +A L+ EM +K ++ ++ + ++ F G++
Sbjct: 544 KGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDE 603
Query: 336 AEEFFREMG------------------------LSGV--ESSSVTFEHLVNGYCRAGDVD 369
A +++ L+G +S+ + + ++ G C+ G V
Sbjct: 604 ANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVA 663
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A ++ D+ KGF P+ T LI C + L+ ++ L P +Y L
Sbjct: 664 DARNLFEDLKVKGFIPDNFTYSSLI-HGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSL 722
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I GLC+ + A+ + ++ KG P+ Y+ IDG+ K+GN A L+++M + +
Sbjct: 723 IYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGI 782
Query: 490 R 490
+
Sbjct: 783 Q 783
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 132/281 (46%), Gaps = 11/281 (3%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD-----SDATAGIGKDVKRVV 241
++ +GL + C+ L+ R V + +++ D S +T IGK +
Sbjct: 576 MVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIE 635
Query: 242 RVRPNVHT-----FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
+ H +N +++G + G +++ ++ G PD ++YS L+
Sbjct: 636 SLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASG 695
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ A L +EM + ++V YN++I G C+ ++RA F ++ G+ +++T+
Sbjct: 696 SIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYN 755
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L++G+C+ G+ A + M ++G +P T +LI LC + + EA+ +L ++++
Sbjct: 756 TLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLD-QMIE 814
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+ P +Y LI+G G M+ K+ EM G P+
Sbjct: 815 NNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPA 855
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 18/238 (7%)
Query: 268 DVWVEMARLG-CEPDCYSYSVLMAVFCEERRMRE--------------AEKLWEEMRD-- 310
D + + RL C P +++ L+ + RR A L+ ++ +
Sbjct: 28 DAALHLFRLAPCRPSLLAHAQLLHILAHARRFPAARALLASLLSAHSVAPTLFPDLVEVY 87
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
K+ +++ ++ + G++ A F EMG +G + + L+N +AGD+ +
Sbjct: 88 KDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGT 147
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A+ V+ M G P+ T+ ++ C RV A D LK + + GL +Y ++
Sbjct: 148 AVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLK-EMEEMGLDVNLVAYHAVM 206
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
G C G+ E A K+ + KG P++ Y+ + GY KEG +E A + KE+ EN+
Sbjct: 207 DGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENE 264
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 76/151 (50%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ PN+ T+N+L+ G + + ++ ++ G P+ +Y+ L+ C++ EA
Sbjct: 711 RLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEA 770
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KL ++M + ++ V Y +I G C G M A + +M + V+ + +T+ L+ G
Sbjct: 771 FKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQG 830
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
Y R G++ + +YN+M G P T V
Sbjct: 831 YARCGNMKAITKLYNEMHICGLLPANWTGHV 861
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 130/276 (47%), Gaps = 34/276 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN T++A++ G ++ V + C PD + +VL+ C+E + +A
Sbjct: 167 VAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAM 226
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL+ EMR K + DVV YN +I GFC+ G + A F +++ G +S ++ ++
Sbjct: 227 KLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSL 286
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR--------- 413
C G A+ + M RKG P T +LI LC K + +AL++L+
Sbjct: 287 CSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNS 346
Query: 414 -------------------------VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
+V G +P +Y L+ LC++GK+++A+ + ++
Sbjct: 347 RSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQ 406
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ KG PSL Y+ IDG +K G E+A L +EM
Sbjct: 407 LSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEM 442
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 110/211 (52%), Gaps = 3/211 (1%)
Query: 245 PNVHTFNALMVGF-YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
PN +FN L+ GF R+G +E + + ++R GC PD +Y++L+ C++ ++ +A
Sbjct: 344 PNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSR-GCYPDIVTYNILLTALCKDGKVDDAVV 402
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ ++ K +++YNT+I G ++G+ A E EM G++ +T +V G
Sbjct: 403 ILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLS 462
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G V AI ++ + G +P ++ LC ++ A+D L +V G PTE
Sbjct: 463 REGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFL-VDMVANGCKPTE 521
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
SY LIKG+ EG EEA K+ E+ +G
Sbjct: 522 ASYTTLIKGITYEGLAEEASKLSNELYSRGL 552
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN L+ ++G K +V M + G P+ S++ L+ FC + + A +
Sbjct: 309 PSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEH 368
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M + D+V YN ++ C+ G++ A ++ G S +++ +++G +
Sbjct: 369 LEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLK 428
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A+ + +MC KG +P+ T ++G L + +V EA+ + FG+ P
Sbjct: 429 VGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFH-YLKGFGIKPNAF 487
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y ++ GLC+ + A+ +MV G +P+ Y+ I G EG E A+ L E+
Sbjct: 488 IYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNEL 547
Query: 485 F 485
+
Sbjct: 548 Y 548
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/292 (18%), Positives = 126/292 (43%), Gaps = 37/292 (12%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C S+ ++ +I+ L + L+G A +V+ + + P + F L++ +
Sbjct: 307 CFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHT-PNSRSFNPLIQGF--------- 356
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
C N + I+ ++ + +++SRG + T N L+ + + V I
Sbjct: 357 -------C----NRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILS 405
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
+ L S + P++ ++N ++ G + G E ++ EM G +P
Sbjct: 406 Q---LSSKGCS-------------PSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKP 449
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D + + ++ E ++ EA K + ++ ++ + YN+I+ G C+ + + A +F
Sbjct: 450 DLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFL 509
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+M +G + + ++ L+ G G + A + N++ +G + ++V
Sbjct: 510 VDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVKKSLIVKV 561
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 154/333 (46%), Gaps = 17/333 (5%)
Query: 154 CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVI 213
C F L+IK + IE VD + M+ S GLS V T N+++ + + + ++
Sbjct: 167 CPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIES-GLSPDVITFNSVLDGLCKEQRIL 225
Query: 214 SGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
+ +++ + ++R RPNV T++ L+ G + ++ + +M
Sbjct: 226 DAHNVFK--------------RALER--GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKM 269
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
LGC + +YS ++ + RM +A + +MRD D V YNT+I GF + +
Sbjct: 270 VELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRL 329
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
A REM +G S VT+ L +G CR+G D A+ + + M +G P T +
Sbjct: 330 REAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSI 389
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ LC RV EAL + + P +Y LI GLC+ GK++EA + M+ G
Sbjct: 390 VDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAG 449
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
P + +S I+G G ++ L + M E
Sbjct: 450 RIPDVVTFSILINGLCDAGRIDTGLELFRGMAE 482
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 148/312 (47%), Gaps = 20/312 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K++ + + + ++ + + V T ALI + + + V Y+++ E
Sbjct: 10 KVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEA------------- 56
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA-RLGCEPDCYSYSVLMAVFCE 294
R P V T+N ++ G + G E ++ +MA G P +YS L+ C
Sbjct: 57 ---RAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCR 113
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ + + KL EEM + + V YNT++ G A +M +G +T
Sbjct: 114 DHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELIT 173
Query: 355 FEHLVNGYCRAGDVDSAILVYND--MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
F ++ G C+ G++++A V ++ M G P+ T ++ LC ++R+ +A ++ K
Sbjct: 174 FGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFK- 232
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
R ++ G P +Y LI GL + KM+EAL++ A+MV G + YS +DG +K G
Sbjct: 233 RALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVG 292
Query: 473 NVEMATMLRKEM 484
+E A ++ ++M
Sbjct: 293 RMEDAVVVLRQM 304
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 196/448 (43%), Gaps = 45/448 (10%)
Query: 6 LKHIIFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLC 65
L + + + K LL Q + ++ PP + LI + + R + +
Sbjct: 142 LVNALLGQGRSKEAFSLLEQMA-ANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMI 200
Query: 66 RSGLTP--TQFSQIALGLKNNPHL--ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLI 121
SGL+P F+ + GL + A F + C+ ++ +Y+T+I LS+
Sbjct: 201 ESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG-CRPNVVTYSTLIDGLSKM--- 256
Query: 122 GPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCV 181
+ D L+L +V+ C + + ++ L+V ++E V
Sbjct: 257 -------------AKMDEALQLLAKMVEL--GCRANTVTYSTVVDGLLKVG---RMEDAV 298
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
++R + G T N LI + + + + RE+ AG
Sbjct: 299 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREML------EAGF-------- 344
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
P+V T+ L G R G F++ ++ MA GC P+ +YS ++ C+ R+ EA
Sbjct: 345 --HPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEA 402
Query: 302 EKLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+E+M RD+ V V+AY+ +I G C+ G++ A EF M +G VTF L+N
Sbjct: 403 LGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILIN 462
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C AG +D+ + ++ M +G P+ T L+ LC RV EA D+ + ++ GL
Sbjct: 463 GLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQ-QMRSDGLS 521
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAE 448
P + +I GL E + E+A ++Q E
Sbjct: 522 PDRSTRRTMIHGLLEVNRDEDAKRIQDE 549
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 130/247 (52%), Gaps = 3/247 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARL--GCEPDCYSYSVLMAVFCEERRMREAE 302
P + TF ++ G +EG E V EM + G PD +++ ++ C+E+R+ +A
Sbjct: 169 PELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAH 228
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ ++ +VV Y+T+I G ++ +M A + +M G +++VT+ +V+G
Sbjct: 229 NVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGL 288
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G ++ A++V M G P+ T LI ++R+ EA+ +L+ +++ G P+
Sbjct: 289 LKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR-EMLEAGFHPS 347
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L GLC G+ +EA+++ M +G P+ YS+ +DG K G V A +
Sbjct: 348 VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFE 407
Query: 483 EMFENQV 489
+M ++V
Sbjct: 408 KMARDEV 414
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 117/238 (49%), Gaps = 4/238 (1%)
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G + +K ++ +M PD +Y L+ ++RR++EA L+EE R K
Sbjct: 4 GLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHP 63
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLS-GVESSSVTFEHLVNGYCRAGDVDSAILV 374
VV YNT+I G C+ G + A + +M + G + VT+ L++G CR +VD +
Sbjct: 64 TVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKL 123
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
+M +G P T L+ L + R EA +L+ ++ G P ++ +IKGLC
Sbjct: 124 LEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLE-QMAANGCPPELITFGLIIKGLC 182
Query: 435 EEGKMEEALKVQAE--MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+EG++E A +V E M+ G P + +++ +DG KE + A + K E R
Sbjct: 183 KEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 2/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N L+ GF++ + + EM G P +Y+ L C R EA ++
Sbjct: 311 PDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEI 370
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV-TFEHLVNGYC 363
+ M + + + Y++I+ G C+ G + A +F +M V + V + L++G C
Sbjct: 371 LDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLC 430
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+AG +D A M R G P+ T +LI LCD R+ L++ + + + G P
Sbjct: 431 KAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRG-MAERGCVPDM 489
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ LC +++EA + +M G P I G ++ E A ++ E
Sbjct: 490 VTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%)
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G C+ ++ +A F++M + VT+ L++G + V A ++ + KG
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
P T +I LC R+ AL + + FG PT +Y LI GLC + ++++
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
K+ EM G+G P+ Y+ ++ + +G + A L ++M N
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAAN 165
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 3/241 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V+T+ A++ E + EMA P+ +Y+VL+ C+ R+ EA L
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+MR K V V YN++I G C+ + A + EM SG T+ L+ G+C+
Sbjct: 104 LSKMRKKCVPT-AVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG-LFPTE 423
+ D A+ V+ + +GF P+ T LI LC + R+ EA+D+ R++K G P
Sbjct: 163 SKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLF-GRMIKSGSCMPNT 221
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI G C GKM+EA+ + M G P + Y+ ++G+ K ++ A L +
Sbjct: 222 VTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQ 281
Query: 484 M 484
M
Sbjct: 282 M 282
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 4/244 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEERRMREAE 302
RP+V T++ L+ G +EG ++ D++ M + G C P+ +Y+ L++ FC +M EA
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 241
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L E M + DVV Y T++ GFC++ + A + +M G+ VTF L++G
Sbjct: 242 NLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGL 301
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR + A+ + +M RK P T ++ C ++ EA + + + P
Sbjct: 302 CRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM---LEEMDCPPN 358
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
S+ +I+GLC+ + EA+++ E + P + +Y+ IDG +E V+ A + +
Sbjct: 359 VVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYR 418
Query: 483 EMFE 486
+M E
Sbjct: 419 KMLE 422
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 2/210 (0%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C D +Y+ L+ C+ +R+ +A +M K DV Y +I C + A
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+F EM + + VT+ L++G C+ G VD A+ + + M RK P T LI L
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGL 125
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C R EA D+L+ +V G P +Y LI G C+ K ++AL+V ++V +GF P
Sbjct: 126 CKAERASEAYDLLE-EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ YS IDG KEG ++ A L M ++
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKS 214
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N+L+ GF R G ++ ++ MA G PD +Y+ LM FC+ R+ +A L
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M K + DVV + +++ G C ++ A EM + T+ +++GYCR
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 338
Query: 365 AGDVDSA-------------ILVYNDMC--------------------RKGFEPEGSTIE 391
A ++ A ++ +N M R+ P+
Sbjct: 339 ANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYT 398
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+I LC +++V EA + + + + G P +Y LI GLC G ++ A +
Sbjct: 399 TVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRA----RGYIE 454
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
KG P++ Y+ ID + K E A L +M +
Sbjct: 455 KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 104/241 (43%), Gaps = 33/241 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ LM GF + + D+ +M R G PD +++ LM C E R+ +A +
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EMR K+ V YNTI+ G+C ++ A +F E + V+F ++ G C+
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEE--MDCPPNVVSFNIMIRGLCK 371
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A+ + + R+ P+ +I LC +++V EA + + + + G P
Sbjct: 372 VNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSI 431
Query: 425 SYMFLIKGLCEEGKM-------------------------------EEALKVQAEMVGKG 453
+Y LI GLC G + E+A ++ +MV +G
Sbjct: 432 TYSTLITGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
Query: 454 F 454
F
Sbjct: 492 F 492
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 147/294 (50%), Gaps = 17/294 (5%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+E++E + I ++ G + C+ +I E+ + E+ E F L +
Sbjct: 281 MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKK-------ELVEEAFSL----ACKL 329
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
G D+ V PNV +NAL+ + F+ + ++ EMA G EP+ +Y++L+ C
Sbjct: 330 G-DLGMV----PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + +A L+++MRDK ++ V YN++I G+C+ G + RA M G+ ++
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 444
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
++ L+ G CR GD+ SA+ ++ +M +G T LI C +++ EA + +
Sbjct: 445 SYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD-K 503
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++ + P E ++ +I+G C G + +A ++ +MV G +P Y + I G
Sbjct: 504 MIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 116/222 (52%), Gaps = 1/222 (0%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
++ LG P+ ++Y+ L+ C+ R +A++L++EM + +E + V Y +I C+ G
Sbjct: 328 KLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 387
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A F +M G++ + + L+NGYC+ G +D A + + M ++G P ++
Sbjct: 388 MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 447
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
LI LC + A++ L + + G+ ++ LI G C++ KM+EA ++ +M+
Sbjct: 448 PLIAGLCRNGDLSSAME-LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 506
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
P+ ++ I+GY GN+ A L +M E ++ ++
Sbjct: 507 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 1/245 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +T + ++ + F D++ +M + G D Y Y+ + +CE R + A L
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M + V+ V YN ++ G C+ + A E M GV + VT+ LV G+CR
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+++ A+ + +DM R GF P + +I EL K V EA L ++ G+ P +
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS-LACKLGDLGMVPNVFA 340
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI LC+ + ++A ++ EM G+G EP+ Y+ I K G +E A L +M
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400
Query: 486 ENQVR 490
+ ++
Sbjct: 401 DKGIK 405
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 151/331 (45%), Gaps = 20/331 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+V+ I+ E +N++ V VRM S G+ N L++ + + V E+
Sbjct: 199 YVYTAGIRAYCESRNLDGARGLV--VRM-ESEGVKASAVPYNVLMYGLCKNMRVQEAVEV 255
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
K+V + V + T+ L+ GF R E + +M RLG
Sbjct: 256 ----------------KNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF 299
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P + S ++ ++ + EA L ++ D + +V AYN +I C+ A+
Sbjct: 300 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 359
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F+EM G+E + VT+ L++ C+ G ++ A+ +++ M KG + LI C
Sbjct: 360 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYC 419
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ + A +L +VK GL PT SY LI GLC G + A+++ EM +G +
Sbjct: 420 KQGSLDRARGLLSG-MVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNN 478
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++A I+G+ K+ ++ A L +M ++ V
Sbjct: 479 YTFTALINGFCKDKKMDEAARLFDKMIDSNV 509
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 2/247 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N + AL+ G +REG F + +W EMA G + D S+++++ ++ ++ L+
Sbjct: 582 NNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 641
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM+++ V+ D + Y +I + M +A + +M + G ++VT L+N C++
Sbjct: 642 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKS 701
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + SA L+ +M P T + + + +A D+ A + G + S
Sbjct: 702 GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ--GHLASIVS 759
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+ LIKGLC+ GK++EA+ + ++ GF P YS I K G++ A L EM
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819
Query: 486 ENQVRQE 492
++ +
Sbjct: 820 YKGLKPD 826
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 2/225 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+ + ++ +E + + W +M G P+ +++VL+ C+ + AE
Sbjct: 649 VKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAE 708
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM NV + YN + F G+M +A++ M L G +S V+F L+ G
Sbjct: 709 LLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGL 767
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+AG + AI + + GF P+ + +I ELC + +A ++ + K GL P
Sbjct: 768 CKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK-GLKPD 826
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+Y I+ G+ ++AL + M+ G +P+ + Y A + G
Sbjct: 827 VVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 138/313 (44%), Gaps = 17/313 (5%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+ + +++ R + RG++ T ALI + K + ++ ++ +DS+
Sbjct: 459 LSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM--IDSN-------- 508
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
V PN TFN ++ G+ G K ++ +M +G +PD Y+Y L++ C
Sbjct: 509 ------VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ +A + ++ + + + ++ G G + EM + GV+ V+F
Sbjct: 563 GVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFT 622
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
+V + D + + +++ +M +G +P+ +I L + + +AL+ V+
Sbjct: 623 IIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVID 682
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G P ++ LI LC+ G + A + EM+ P+ Y+ F+D + EG++E
Sbjct: 683 -GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEK 741
Query: 477 ATMLRKEMFENQV 489
A L M + +
Sbjct: 742 AKDLHSAMLQGHL 754
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+FN L+ G + G ++ D+ ++ G PDC SYS ++ C+ + +A +LW EM
Sbjct: 759 SFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM 818
Query: 309 RDKNVEHDVVAYNTIIGGFCEI-GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
K ++ DVVAYN I +C + GE +A + M SGV+ + T+ L++G
Sbjct: 819 LYKGLKPDVVAYNIFI-RWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI----- 872
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
S +L Y+ C +G + I++ + EL D
Sbjct: 873 --SLMLHYDFSCFRGTK---QYIQISVYELMD 899
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 128/279 (45%), Gaps = 35/279 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV +N +M+ R + ++ EM G EP+ ++YS+L+ F + + + A
Sbjct: 480 IEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAW 539
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT-FEHLVNG 361
+ +M N E + V YNTII G C++G+ ++A+E + + S S T + +++G
Sbjct: 540 DVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDG 599
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI------------ 409
+ + GD DSA+ Y +M G P T LI C R+ AL++
Sbjct: 600 FVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLD 659
Query: 410 ----------------------LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
L + + + GL P Y LI G GKM+ A+ +
Sbjct: 660 LPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYK 719
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+MV G L Y+ IDG +K+GN+ +A+ L E+ +
Sbjct: 720 KMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLD 758
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 127/245 (51%), Gaps = 1/245 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++N+++ GF + G + + + EM+ G P+ +++ L+ FC+ RM A ++ EM
Sbjct: 592 SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ ++ D+ AY +I GFC+ +M A F E+ G+ + + L++G+ G +
Sbjct: 652 KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKM 711
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D+AI +Y M G + T +I L + A D L + ++ G+ P E +M
Sbjct: 712 DAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASD-LYSELLDLGIVPDEILHMV 770
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
L+ GL ++G+ +A K+ EM K P++ +YS I G+ +EGN+ A L EM E
Sbjct: 771 LVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKG 830
Query: 489 VRQED 493
+ +D
Sbjct: 831 IVHDD 835
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 120/533 (22%), Positives = 211/533 (39%), Gaps = 81/533 (15%)
Query: 11 FSVSKPKPKPQLLSQF----STSSST----PPSDQSHNL---IATVVSLLTHHRSKSRWN 59
F VSK P L +F SS T PP +QS ++ +S L S N
Sbjct: 4 FMVSKRFRPPIFLHRFINPKPISSQTRFLHPPDNQSRDISDSTTETISTLEFPHKTSVPN 63
Query: 60 HL----LSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQ--HKSLCKHSLSSYATIIH 113
H S + + + ++ LG +N+P AL++ ++ + H+ LC+ + +IH
Sbjct: 64 HSPLTSTSETENHVDDARVIEVLLGRRNDPVSALQYCNWVKPLHR-LCEGG-DVFWVLIH 121
Query: 114 ILSRARLIGPARDVIRVALRSPENDPKL---KLFEVLVKTYRECG--SAPFVFDLLIKCC 168
IL + + V S N+P L + LV + + G P F+ L+
Sbjct: 122 ILLSSIHTHDRASNLLVMFVS--NNPTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAY 179
Query: 169 LEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSD 228
+ K +++ VD +++ R + V N ++ + R + EIY ++
Sbjct: 180 IRNK---RMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM------ 230
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
G+ D NV T LM RE E+ ++ + G EPD +S+
Sbjct: 231 VLIGVAGD---------NVTT-QLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLA 280
Query: 289 MAVFCEERRMREAEKLWEEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
+ C+ + A L EMR K V Y ++I F + G M A EM G
Sbjct: 281 VQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFG 340
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ S + LVNGYC+ ++ A+ ++N M +G P+ V++ C + +A+
Sbjct: 341 IPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAI 400
Query: 408 DILKARVVKFGLFPTEKSYMFLIKG----------------------------------L 433
+ R+ + P+ +I+G
Sbjct: 401 EFY-MRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLF 459
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
C++GK++ A M KG EP++ Y+ + + + N+++A + EM E
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 132/302 (43%), Gaps = 17/302 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K E V I R +MSRG + + + ++ ++ RE+ G
Sbjct: 254 KPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRG----------- 302
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ V + T+ +++V F +EG E+ V EM G + + L+ +C+
Sbjct: 303 ----KLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKG 358
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ +A L+ M ++ + D V ++ ++ FC+ EM +A EF+ M + SSV
Sbjct: 359 NELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLV 418
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
++ G +A ++A+ ++ND + + G + C + +V A LK
Sbjct: 419 HTMIQGCLKAESPEAALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQ 477
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K G+ P Y ++ C M+ A + +EM+ KG EP+ YS IDG+ K + +
Sbjct: 478 K-GIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQ 536
Query: 476 MA 477
A
Sbjct: 537 NA 538
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 127/329 (38%), Gaps = 62/329 (18%)
Query: 142 KLFEVLVKTYR---ECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
++ + L+K R C S + D +K + ++ V+ R + G S V T
Sbjct: 575 EMLQNLIKEKRYSMSCTSYNSIIDGFVK-------VGDTDSAVETYREMSENGKSPNVVT 627
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
+LI + + E+ E+ + + ++ ++ + AL+ GF
Sbjct: 628 FTSLINGFCKSNRMDLALEMTHEM----------------KSMELKLDLPAYGALIDGFC 671
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
++ + ++ E+ LG P+ Y+ L++ F +M A L+++M + + D+
Sbjct: 672 KKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLF 731
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
Y T+I G + G + A + + E+ G+ + LVNG + G A + +M
Sbjct: 732 TYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+K P VL+ Y +I G EG
Sbjct: 792 KKKDVTP-----NVLL-------------------------------YSTVIAGHHREGN 815
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+ EA ++ EM+ KG +++ + G
Sbjct: 816 LNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
contains a PPR repeat domain PF|01535 [Arabidopsis
thaliana]
Length = 797
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 194/408 (47%), Gaps = 23/408 (5%)
Query: 81 LKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPK 140
+ + L++ FF + +HS S + H+L+ R + ++ L+ +
Sbjct: 60 MSESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGSGSA 119
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
+L E+L ++R+ S V+D+L+ + ++ + I++ + + L+V + N
Sbjct: 120 SRLCELLSNSFRKWESTGLVWDMLL---FLSSRLRMVDDSLYILKKMKDQNLNVSTQSYN 176
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLD----SDATAGIGKDVK---RVVRVR--------P 245
++++ + +++Y+E+ + S G+ + K V+ +R P
Sbjct: 177 SVLYHFRETDKM---WDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGP 233
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V +FN++M G+ + G + + + + + G P YS+++L+ C + EA +L
Sbjct: 234 SVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELA 293
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M VE D V YN + GF +G ++ A E R+M G+ +T+ L+ G C+
Sbjct: 294 SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 353
Query: 366 GDVDSAILVYNDMCRKGFEPEGST-IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G++D +++ DM +GFE V++ LC R+ EAL + ++ GL P
Sbjct: 354 GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFN-QMKADGLSPDLV 412
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+Y +I GLC+ GK + AL + EM K P+ + A + G ++G
Sbjct: 413 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKG 460
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 111/238 (46%), Gaps = 4/238 (1%)
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
+ ++ G + G ++ ++ +M G PD +YS+++ C+ + A L++EM D
Sbjct: 380 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 439
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
K + + + ++ G C+ G + A + SG V + +++GY ++G ++
Sbjct: 440 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 499
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK-FGLFPTEKSYMFL 429
A+ ++ + G P +T LI C + + EA IL V+K +GL P+ SY L
Sbjct: 500 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD--VIKLYGLAPSVVSYTTL 557
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT-MLRKEMFE 486
+ G + +++ EM +G P+ YS G + E +LR+ +FE
Sbjct: 558 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 615
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 111/261 (42%), Gaps = 31/261 (11%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR--EVFGL--------- 225
IE +++ ++++ G++ V+T N+LI+ + + + +I +++GL
Sbjct: 497 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 556
Query: 226 --DSDATAGIGKDVKRVVR------VRPNVHTFNALMVGF------------YREGAFEK 265
D+ A G K + + R + P T++ + G RE FEK
Sbjct: 557 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 616
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
+ +M G PD +Y+ ++ C + + A E M+ +N++ YN +I
Sbjct: 617 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 676
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
C G + +A+ F + V S + L+ +C GD + A+ +++ + +GF
Sbjct: 677 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 736
Query: 386 EGSTIEVLIGELCDKRRVFEA 406
+I LC + V E+
Sbjct: 737 SIRDYSAVINRLCRRHLVNES 757
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 103/236 (43%), Gaps = 13/236 (5%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V TFN+L+ G+ + + + + G P SY+ LM + + +
Sbjct: 512 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 571
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGE------------MARAEEFFREMGLSGVES 350
+L EM+ + + V Y+ I G C + + ++ R+M G+
Sbjct: 572 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPP 631
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+T+ ++ CR + A + M + + +T +LI LC + +A D
Sbjct: 632 DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA-DSF 690
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ + + ++ +Y LIK C +G E A+K+ +++ +GF S+ YSA I+
Sbjct: 691 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 746
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 129/249 (51%), Gaps = 7/249 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ PNV TF AL+ F + G + ++++ M ++ PD ++Y L+ C + EA
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+++ M + V Y T+I GFC+ + + F EM GV ++++T+ L+ G
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVKFG 418
YC G D A V+N M + P+ T VL+ LC +V +AL I ++ R +
Sbjct: 373 YCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ +Y +I+G+C+ GK+E+A + + KG +P++ Y+ I G+ + G + A
Sbjct: 433 IV----TYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEAD 488
Query: 479 MLRKEMFEN 487
L K+M E+
Sbjct: 489 SLFKKMKED 497
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 127/262 (48%), Gaps = 15/262 (5%)
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
A+ +GK +K + P++ TF +L+ G+ E ++ ++ +G +P+ +Y+ L
Sbjct: 137 ASCFLGKMMK--LGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTL 194
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ C+ R + A +L+ +M +VV YN ++ G CEIG A R+M +
Sbjct: 195 IRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI 254
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC------DKRR 402
E + +TF L++ + + G + A +YN M + P+ T LI LC + R+
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+F ++ + G +P E Y LI G C+ ++E+ +K+ EM KG + Y+
Sbjct: 315 MFYLME-------RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYT 367
Query: 463 AFIDGYMKEGNVEMATMLRKEM 484
I GY G ++A + +M
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQM 389
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 17/279 (6%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
++R +M R + V T ALI + ++ E+Y +V +
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY----------------NVMIQMS 288
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+ +L+ G G ++ ++ M R GC P+ Y+ L+ FC+ +R+ +
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++ EM K V + + Y +I G+C +G A+E F +M T+ L++G
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G V+ A++++ M ++ + T ++I +C +V +A D+ + K G+ P
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK-GMKPN 467
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+Y +I G C G + EA + +M GF P+ +Y
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 145/319 (45%), Gaps = 23/319 (7%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
+IE + + ++ G V T LI + + + + E++ ++ T G
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM------GTNG-- 218
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
RPNV T+NAL+ G G + + +M + EP+ +++ L+ F +
Sbjct: 219 --------SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
++ EA++L+ M +V DV Y ++I G C G + A + F M +G + V
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR---VFEALDILK 411
+ L++G+C++ V+ + ++ +M +KG T VLI C R E + +
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+R P ++Y L+ GLC GK+E+AL + M + + ++ Y+ I G K
Sbjct: 391 SRRAP----PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 472 GNVEMATMLRKEMFENQVR 490
G VE A L +F ++
Sbjct: 447 GKVEDAFDLFCSLFSKGMK 465
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 1/218 (0%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
+M +LG EPD +++ L+ +C R+ +A L++++ + +VV Y T+I C+
Sbjct: 143 KMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A E F +MG +G + VT+ LV G C G A + DM ++ EP T
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
LI ++ EA ++ +++ ++P +Y LI GLC G ++EA ++ M
Sbjct: 263 ALIDAFVKVGKLMEAKELYNV-MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G P+ IY+ I G+ K VE + EM + V
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 1/227 (0%)
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
F D++ M P ++ L++V + R L+E+M+ + + N
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
++ C + RA F +M G E VTF L+NGYC ++ AI +++ + G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
F+P T LI LC R + A+++ G P +Y L+ GLCE G+ +A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN-GSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ +M+ + EP++ ++A ID ++K G + A L M + V
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A + F M S S + F L++ + D I ++ M G P T +++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
+C + A L +++K G P ++ L+ G C ++E+A+ + +++G GF+
Sbjct: 127 CVCLSSQPCRASCFL-GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
P++ Y+ I K ++ A L +M N R
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSR 220
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 137/287 (47%), Gaps = 7/287 (2%)
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDA-TAGIGKDVKRVVRVRP---NVHTFNALMVGFYR 259
W SR G E Y E+ L +G V +++ R ++ TF+ L+ + R
Sbjct: 131 WATSR-PGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVR 189
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G + + M C+PD ++S+L+++ C +RR EA+ ++ ++DK E DV+
Sbjct: 190 AGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDK-FEPDVIV 248
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
Y ++ G+C G + AE F EM ++G + T+ +++ CR G + A V+ +M
Sbjct: 249 YTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEML 308
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
G EP T L+ R + L + ++ + G P +Y FLI+ C++G +
Sbjct: 309 DVGCEPNSITFNNLLRVHVKAGRTEKVLQVYN-QMKRMGCPPDTVTYNFLIESHCKDGNL 367
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+EALKV MV KG P+ ++ K +V A L +M E
Sbjct: 368 DEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKE 414
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ P+V + L+ G+ R G + E V+ EM GC P+ Y+Y++++ C ++ A
Sbjct: 241 KFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRA 300
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++ EM D E + + +N ++ + G + + + +M G +VT+ L+
Sbjct: 301 HDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIES 360
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C+ G++D A+ V N M +KG P ST L G + R V A L A++ +
Sbjct: 361 HCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGA-HRLYAKMKELKCKA 419
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y L++ + + LK++ EM EP++ Y I Y G+ A
Sbjct: 420 NTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFF 479
Query: 482 KEMFENQ 488
+EM E +
Sbjct: 480 REMVEEK 486
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 2/238 (0%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
+V PNV+T+ ++ R G + DV+ EM +GCEP+ +++ L+ V + R
Sbjct: 273 KVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRT 332
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+ +++ +M+ D V YN +I C+ G + A + M G ++ TF L
Sbjct: 333 EKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGL 392
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+ DV+ A +Y M + T +L+ D + L LK + +
Sbjct: 393 FGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLK-LKKEMDEDD 451
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV-GKGFEPSLEIYSAFIDGYMKEGNVE 475
+ P +Y LI C G A K EMV K +PSL +Y + K G ++
Sbjct: 452 VEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRKAGQLK 509
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TFN L+ + G EKV V+ +M R+GC PD +Y+ L+ C++ + EA K+
Sbjct: 314 PNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKV 373
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M K + +N + G ++ ++ A + +M ++++VT+ L+ +
Sbjct: 374 LNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVD 433
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D + + +M EP +T VLI C A + V + L P+
Sbjct: 434 TKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLP 493
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
Y +++ L + G++++ ++ A MV +GF
Sbjct: 494 VYEKVLQQLRKAGQLKKHEELVAVMVDRGF 523
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 6/251 (2%)
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+D+KR PNV T+N L+ + + + + VEM+ GC PD SY+ +++ CE
Sbjct: 170 RDMKRD-GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCE 228
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
++E +L E E V YN +I G C+ + A E REM G+ + ++
Sbjct: 229 VGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVIS 283
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+N C +G ++ A M ++G P T+ L+ + F+ALD+ +
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
FGL P +Y L++G C G + +A+ V + M G P++ Y + I+G+ K G++
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL 403
Query: 475 EMATMLRKEMF 485
+ A + +M
Sbjct: 404 DGAVYIWNKML 414
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 3/245 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV +++ L+ G E +M + GC P+ Y+ S L+ +A
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDAL 336
Query: 303 KLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
LW +M R ++ +VVAYNT++ GFC G + +A F M G + T+ L+NG
Sbjct: 337 DLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ + G +D A+ ++N M G P ++ LC + EA +++ + K P
Sbjct: 397 FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEI-MSKENCAP 455
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG-FEPSLEIYSAFIDGYMKEGNVEMATML 480
+ ++ IKGLC+ G+++ A KV +M + P++ Y+ +DG K +E A L
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 481 RKEMF 485
+E+F
Sbjct: 516 TREIF 520
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 116/513 (22%), Positives = 206/513 (40%), Gaps = 87/513 (16%)
Query: 34 PSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQ----IALGLKNNPHLAL 89
PS + +N + +LL +R + + + R G P F+ AL N A
Sbjct: 144 PSVKIYNHVLD--TLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 201
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDV---------IRVALRS---PEN 137
+ +K C ++S Y T+I + L+ R++ + AL + E+
Sbjct: 202 KLLVEMSNKGCCPDAVS-YTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEH 260
Query: 138 DPKLKLFEVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
D K FE L++ E G +P V + LI + N +IE + ++ RG
Sbjct: 261 DYK-GAFE-LMREMVEKGISPNVISYSTLINV---LCNSGQIELAFSFLTQMLKRGCHPN 315
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREV---FGLDSDATA---------GIGKDVKRV--- 240
+ T ++L+ +++ ++ FGL + A G VK V
Sbjct: 316 IYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVF 375
Query: 241 -----VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ PN+ T+ +L+ GF + G+ + +W +M GC P+ Y+ ++ C
Sbjct: 376 SHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRH 435
Query: 296 RRMREAEKLWEEMRDKNV--------------------------------EH----DVVA 319
+ +EAE L E M +N +H ++V
Sbjct: 436 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVT 495
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YN ++ G + + A RE+ + GVE SS T+ L++G C AG A+ + M
Sbjct: 496 YNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMM 555
Query: 380 RKGFEPEGSTIEVLIGELCDK---RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
G P+ T+ ++I C + R + LD++ K+ P SY +I GLC
Sbjct: 556 VDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWR--PDVISYTNVIWGLCRS 613
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
E+ + + M+ G PS+ +S I+ ++
Sbjct: 614 NCREDGVILLERMISAGIVPSIATWSVLINCFI 646
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAVFCEERRMREAEK 303
PN++T ++L+ G + G D+W +M R G +P+ +Y+ L+ FC + +A
Sbjct: 314 PNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVS 373
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ M + ++ Y ++I GF + G + A + +M SG + V + ++V C
Sbjct: 374 VFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALC 433
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R A + M ++ P T I LCD R+ A + + + P
Sbjct: 434 RHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNI 493
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ GL + ++EEA + E+ +G E S Y+ + G G +A L +
Sbjct: 494 VTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGK 553
Query: 484 MF 485
M
Sbjct: 554 MM 555
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 6/206 (2%)
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
++ V++ + ++ + L ++M+ + + ++I + ++G RA E F +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G + S + H+++ + +VY DM R GFEP T VL+ LC +V
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
A +L K G P SY +I +CE G ++E + + + FEP + +Y+A
Sbjct: 198 DGAKKLLVEMSNK-GCCPDAVSYTTVISSMCEVGLVKEGRE-----LAERFEPVVSVYNA 251
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQV 489
I+G KE + + A L +EM E +
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGI 277
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 121/243 (49%), Gaps = 1/243 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNV T+ A++ G+ R+ + E + M G P+ +Y+ L+ C+ A +
Sbjct: 340 KPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYE 399
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L M ++ +V YN I+ G C+ G + A + + +G+++ VT+ L++ +C
Sbjct: 400 LMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHC 459
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ ++ A++++N M + G +P+ + LI C ++R+ E+ ++ V+FGL PT
Sbjct: 460 KQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKES-EMFFEEAVRFGLVPTN 518
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
K+Y +I G C EG + ALK M G Y A I G K+ ++ A L
Sbjct: 519 KTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDA 578
Query: 484 MFE 486
M E
Sbjct: 579 MIE 581
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 135/249 (54%), Gaps = 6/249 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RPN+ F ++ G + G+ ++ ++ EM G +P+ Y+++ L+ C++ +A
Sbjct: 268 LRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAF 327
Query: 303 KLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L+ ++ R +N + +V+ Y +I G+C +M RAE M G+ ++ T+ L++G
Sbjct: 328 RLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDG 387
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C+AG+ + A + N M +GF P T ++ LC K RV EA +LK+ + GL
Sbjct: 388 HCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSG-FRNGLDA 446
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ +Y LI C++ ++++AL + +MV G +P + Y+ I + +E ++ + M
Sbjct: 447 DKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMF- 505
Query: 482 KEMFENQVR 490
FE VR
Sbjct: 506 ---FEEAVR 511
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 112/242 (46%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T N ++ G E E+++ EM G +P+C SY V++ +C+ + E+++
Sbjct: 165 PSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRW 224
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M ++ D + I+ FCE G + RA +FR G+ + + F ++ G C+
Sbjct: 225 LGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCK 284
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G V A + +M +G++P T LI LC K +A + V P
Sbjct: 285 RGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVL 344
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I G C + KM A + + M +G P+ Y+ IDG+ K GN E A L M
Sbjct: 345 TYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVM 404
Query: 485 FE 486
E
Sbjct: 405 NE 406
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 100/191 (52%), Gaps = 1/191 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+NA++ G ++G ++ V R G + D +Y++L++ C++ +++A L
Sbjct: 411 PNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVL 470
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M ++ D+ +Y T+I FC M +E FF E G+ ++ T+ ++ GYCR
Sbjct: 471 FNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCR 530
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G++ A+ ++ M G + T LI LC + ++ EA + A + K GL P E
Sbjct: 531 EGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEK-GLTPCEV 589
Query: 425 SYMFLIKGLCE 435
+ + L C+
Sbjct: 590 TRVTLAYEYCK 600
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 117/241 (48%), Gaps = 3/241 (1%)
Query: 248 HTFNALMVGFYRE-GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
H MV + E G ++ ++ +EM G P + + ++ + E + AE L++
Sbjct: 132 HEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFD 191
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
EM + V+ + V+Y ++ G+C++G + ++ + M G + T +V +C G
Sbjct: 192 EMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKG 251
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
V A+ + C G P +I LC + V +A ++L+ V + G P ++
Sbjct: 252 FVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGR-GWKPNVYTH 310
Query: 427 MFLIKGLCEEGKMEEALKVQAEMV-GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
LI GLC++G E+A ++ ++V + +P++ Y+A I GY ++ + A ML M
Sbjct: 311 TALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMK 370
Query: 486 E 486
E
Sbjct: 371 E 371
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 131/287 (45%), Gaps = 27/287 (9%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
D K+ E+L+ +E G AP + LI + N E+ +++ ++ G S
Sbjct: 356 DEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFER---AYELMNVMNEEGFSPN 412
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDA---TAGIGKDVK------------ 238
V T NA++ + + V Y++ + F GLD+D T I + K
Sbjct: 413 VCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFN 472
Query: 239 RVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
++V+ ++P++H++ L+ F RE ++ E + E R G P +Y+ ++ +C E
Sbjct: 473 KMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREG 532
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+R A K + M D D + Y +I G C+ ++ A + M G+ VT
Sbjct: 533 NLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRV 592
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
L YC+ D SA++V + +K + T+ L+ +LC +R+V
Sbjct: 593 TLAYEYCKIDDGCSAMVVLERLEKKLWV---RTVNTLVRKLCSERKV 636
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 40/221 (18%)
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
+ +KN E ++ F EIG + A E EM G+ S+ T +V G
Sbjct: 123 ISNKNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGL 182
Query: 368 VDSAILVYNDMCRKGFEP-----------------------------------EGSTIEV 392
V+ A ++++MC +G +P + +T+ +
Sbjct: 183 VEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSL 242
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
++ E C+K V AL + R + GL P ++ +I+GLC+ G +++A ++ EMVG+
Sbjct: 243 IVREFCEKGFVTRALWYFR-RFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGR 301
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
G++P++ ++A IDG K+G E A L F VR E+
Sbjct: 302 GWKPNVYTHTALIDGLCKKGWTEKAFRL----FLKLVRSEN 338
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 146/313 (46%), Gaps = 28/313 (8%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
++R ++ R + V T +ALI + V E+YRE+ +R
Sbjct: 137 LLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREML--------------RR--N 180
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD-----------CYSYSVLMAV 291
+ P T+++++ GF + E + ++ M GC PD C + L+
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
FC+ + A+ L++EM V D+V NT++ G CE G++ +A E F+ S ++
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+ T ++NG C+ VD A ++N + G E + T +LIG + A DI
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ K G+ P+ +Y ++ G C++ ++EEA ++ MV +G P + +S I GY K
Sbjct: 361 EMLCK-GIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKA 419
Query: 472 GNVEMATMLRKEM 484
G V+ L EM
Sbjct: 420 GRVDDGLELFSEM 432
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 123/236 (52%), Gaps = 16/236 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K+E +++ ++ + + +TCN +I + +G V ++++ +
Sbjct: 281 KLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSL------------- 327
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
V V +V T+N L+ F +EG F + ED+++EM G P +Y+ ++ FC++
Sbjct: 328 ---PVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQ 384
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ EA ++ + M + DVV ++T+I G+C+ G + E F EM G+ + ++T+
Sbjct: 385 NRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITY 444
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
L++G+C+ GD++ A ++ +M G P+ T ++ LC K + + L +L+
Sbjct: 445 NALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLE 500
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 143/309 (46%), Gaps = 13/309 (4%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++E + +++S+G S + T N LI R K + G + +
Sbjct: 200 RLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAK--------RHLIHGFCQVGNVNVAQ 251
Query: 236 DVKRVV---RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
D+ + + V P++ T N L+ G G EK +++ + + D + ++++
Sbjct: 252 DLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGM 311
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C+ ++ EA L+ + VE DVV YN +IG F + G RAE+ + EM G+ S+
Sbjct: 312 CKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPST 371
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ +V+G+C+ ++ A + + M +G P+ T LI C RV + L++ +
Sbjct: 372 VTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELF-S 430
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ + GL +Y LI G C+ G + A + EMV G P + + + G +
Sbjct: 431 EMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKA 490
Query: 473 NVEMA-TML 480
++ TML
Sbjct: 491 ELQKGLTML 499
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 121/258 (46%), Gaps = 12/258 (4%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV TF LM G REG + + M G +PD +Y ++ C+ A +
Sbjct: 9 NVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNML 68
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M + ++ +VV Y+ I+ C+ G +A+ F EM G+ + +T+ +++GYC
Sbjct: 69 RKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSY 128
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G A + DM + +P+ T LI + +V A ++ + +++ +FPT +
Sbjct: 129 GKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYR-EMLRRNIFPTTIT 187
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID-----------GYMKEGNV 474
Y +I G C+ ++E+A + MV KG P + + ID G+ + GNV
Sbjct: 188 YSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNV 247
Query: 475 EMATMLRKEMFENQVRQE 492
+A L +EM N V +
Sbjct: 248 NVAQDLFQEMISNGVSPD 265
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 143/315 (45%), Gaps = 27/315 (8%)
Query: 143 LFEVLVKTYRECGSAPFVFDLLIKCCLEVK--------NIEKIETCVDIVRMLMSRGLSV 194
+F+++V + C + LI C K + + D+ + ++S G+S
Sbjct: 207 MFDLMVS--KGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSP 264
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALM 254
+ TCN L+ + + E+++ V + ++ + T N ++
Sbjct: 265 DIVTCNTLLAGLCENGKLEKALEMFK----------------VFQKSKMDLDTATCNIII 308
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
G + ++ D++ + G E D +Y++L+ VF +E AE ++ EM K +
Sbjct: 309 NGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGII 368
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
V YN+++ GFC+ + A + M G VTF L+ GYC+AG VD + +
Sbjct: 369 PSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLEL 428
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
+++MC++G + T LI C + A DI + +V G+ P ++ ++ GLC
Sbjct: 429 FSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFE-EMVSSGVCPDTITFRSMLAGLC 487
Query: 435 EEGKMEEALKVQAEM 449
+ ++++ L + ++
Sbjct: 488 TKAELQKGLTMLEDL 502
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 134/262 (51%), Gaps = 12/262 (4%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+++ NV ++A++ ++G K ++++ EM G P+ +Y+ ++ +C + +A
Sbjct: 75 QIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDA 134
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
E+L +M ++N++ DVV ++ +I F + G+++ AEE +REM + +++T+ +++G
Sbjct: 135 EQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDG 194
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR-----------VFEALDIL 410
+C+ ++ A +++ M KG P+ T+ LI C +R V A D+
Sbjct: 195 FCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLF 254
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ ++ G+ P + L+ GLCE GK+E+AL++ + + I+G K
Sbjct: 255 Q-EMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCK 313
Query: 471 EGNVEMATMLRKEMFENQVRQE 492
V+ A L + N V +
Sbjct: 314 GNKVDEAWDLFNSLPVNGVETD 335
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 21/144 (14%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAGI 233
++E +V ++S G S V T + LI + V G E++ E+ GL +D
Sbjct: 386 RLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTI--- 442
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
T+NAL+ GF + G +D++ EM G PD ++ ++A C
Sbjct: 443 ---------------TYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLC 487
Query: 294 EERRMREAEKLWEEMRDKNVEHDV 317
+ +++ + E+++ K+V+H++
Sbjct: 488 TKAELQKGLTMLEDLQ-KSVDHEL 510
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 119/233 (51%), Gaps = 2/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + FN ++ G + ++ ++ EMA G PD ++Y++L+ C+ R++REA L
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
WE+M + V+ +V Y++++ +C G M A + + EM G + VT+ L+ G+
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D A + +M + G T LI LC RV E ++LK R G PT
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLK-RFETEGFVPTAM 527
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y +I G + G M A V +M KG P++ Y++FIDGY K ++A
Sbjct: 528 TYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLA 580
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 118/240 (49%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+ LM G + AF+K + EM + G + Y+Y+ L+ C R+ E ++
Sbjct: 454 PNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEM 513
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + + YN+II GF + G M A +++M G+ + VT+ ++GYC+
Sbjct: 514 LKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCK 573
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D A+ + ND+ KG P+ + LI C + + AL +L ++K GL P
Sbjct: 574 TSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVL-VLMLKDGLLPNIS 632
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y I G MEEAL+ +M+ +G + Y+ IDG+ K+GNV A L EM
Sbjct: 633 VYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEM 692
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P + T+++L++ + G ++ ++ EM G P+ +Y+ LM + +A
Sbjct: 417 VKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAY 476
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EM+ V + YNT+I G C +G + E + G +++T+ ++NG+
Sbjct: 477 ALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGF 536
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+AG + SA VY MC KG P T I C AL +L K GL P
Sbjct: 537 IKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCK-GLRPD 595
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI G C+EG M AL+V M+ G P++ +Y++FI GY +E A +
Sbjct: 596 IAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYE 655
Query: 483 EMFENQV 489
+M + +
Sbjct: 656 KMIKEGI 662
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 120/249 (48%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P T+N+++ GF + G V+ +M G P+ +Y+ + +C+ A K+
Sbjct: 524 PTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKM 583
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++R K + D+ AYN++I GFC+ G M+ A + M G+ + + + GY
Sbjct: 584 LNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKN 643
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
++ A+ Y M ++G + + +T LI V AL + V K G P
Sbjct: 644 LKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAK-GNIPDHI 702
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ L GLC G +++A K+ EM P++ +Y+ I+GY++ G ++ A L EM
Sbjct: 703 TFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEM 762
Query: 485 FENQVRQED 493
E ++ +D
Sbjct: 763 LERKIMPDD 771
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 4/250 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P TFN+++ + G E+ + E+ G + + LM +C +R +R+A +
Sbjct: 245 PWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDI 304
Query: 305 WEE-MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+EE +RD V DV Y +I G E G +A E R+M G+ S+ F ++ G
Sbjct: 305 FEETLRDGLVPTDVT-YTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLL 363
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
A+ ++ +M G P+ T +LI LC +R++ EAL++ + ++ + G+ P
Sbjct: 364 NDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWE-KMNETGVKPYI 421
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ C G M+EA+K+ EM GKGF P++ Y+ + G++ + + A L E
Sbjct: 422 VTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAE 481
Query: 484 MFENQVRQED 493
M +N V D
Sbjct: 482 MKQNGVSCND 491
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 107/229 (46%), Gaps = 13/229 (5%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN+ T+ + + G+ + + + ++ G PD +Y+ L+ FC+E M A
Sbjct: 557 IPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHAL 616
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ M + ++ YN+ I G+ + M A F+ +M G++ + T+ L++G+
Sbjct: 617 QVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGF 676
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC------DKRRVFEALDILKARVVK 416
+ G+V A+ +Y++M KG P+ T L LC D R++ + ++ L R
Sbjct: 677 SKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIR--- 733
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
P Y LI G GK++EA ++ EM+ + P Y +
Sbjct: 734 ----PNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 1/218 (0%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM G D + + V+M +E +A +L++EM +E D + I C++
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ RA R+M +G TF +V+ + G ++ A+ + +++ G +
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
L+ C +R V +ALDI + ++ GL PT+ +Y LI+G EEG E+A ++ +M
Sbjct: 287 TLMHGYCLQREVRKALDIFE-ETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRD 345
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G PS ++ I G + + + A L KEM ++ +
Sbjct: 346 HGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI 383
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 75/151 (49%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ +N+ + G+ E+ + +M + G + D +Y+ L+ F ++ + A KL
Sbjct: 629 PNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKL 688
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM K D + + + G C G++ A + EM + + + + L+NGY R
Sbjct: 689 YSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLR 748
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
G + A ++++M + P+ +T ++L+G
Sbjct: 749 NGKLQEAFRLHDEMLERKIMPDDTTYDILVG 779
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 2/241 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F+ +M ++EG ++ ++ EM EPD SV +A C+ R A + +M+
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
D +N+++ + G M A E+ +G + S V L++GYC +V
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A+ ++ + R G P T VLI C + + E L ++ GL P+ + +
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLI-RGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMV 358
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
IKGL + ++A+ + EM G P Y+ I + + A L ++M E V
Sbjct: 359 IKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGV 417
Query: 490 R 490
+
Sbjct: 418 K 418
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
EM G + F+ ++ + G D A+ ++++M EP+ V I LC R
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
AL +L+ ++ G P + ++ ++ L + G+MEEAL ++ E++ G + S+ +
Sbjct: 227 DANRALLVLR-KMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLA 285
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
+ + GY + V A ++FE +R
Sbjct: 286 TTLMHGYCLQREVRKAL----DIFEETLRD 311
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 162/358 (45%), Gaps = 22/358 (6%)
Query: 138 DPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
D K+ + E ++++ G P +++ LI + ++E + SR +
Sbjct: 353 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG---ELEGAFSTFGQMKSRHIKPD 409
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
T NALI + + + + + ++ E+ + V P V TFN L+
Sbjct: 410 HITYNALINGLCKAERITNAQDLLMEM----------------QDNGVNPTVETFNTLID 453
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
+ R G EK V EM G +P+ SY ++ FC+ ++ EA + ++M K+V
Sbjct: 454 AYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 513
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
+ YN II + E G +A +M +G+ S VT+ L+ G C + A +
Sbjct: 514 NAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEII 573
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
N + P+ + LI C + + +ALD L+ R+ K+G+ T ++Y LI GL
Sbjct: 574 NSLSNHRLIPDAVSYNTLISACCYRGNIDKALD-LQQRMHKYGIKSTVRTYHQLISGLGG 632
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
G++ E + +M+ PS I++ ++ Y K GN A LRKEM + + +D
Sbjct: 633 AGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 690
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N ++ G +R G +V+ EM P+ +Y+ ++ + + +L
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M ++ + + YN ++ G C G M EM + T+ L +G R
Sbjct: 258 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 317
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GD + + ++ + G T +L+ LC +V A ++L++ +V GL PT
Sbjct: 318 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS-LVNAGLVPTRV 376
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G C+ G++E A +M + +P Y+A I+G K + A L EM
Sbjct: 377 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 436
Query: 485 FENQVR 490
+N V
Sbjct: 437 QDNGVN 442
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 115/269 (42%), Gaps = 13/269 (4%)
Query: 231 AGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
AG G D V V PN T+N ++ G + G E + +M G +P+ +
Sbjct: 213 AGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAIT 272
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+VL++ C RM E L +EM + + D Y+ + G G+ F +
Sbjct: 273 YNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYL 332
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV- 403
+GV T L+NG C+ G V A V + G P LI C +
Sbjct: 333 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 392
Query: 404 --FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
F +K+R +K P +Y LI GLC+ ++ A + EM G P++E +
Sbjct: 393 GAFSTFGQMKSRHIK----PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 448
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+ ID Y + G +E ++ EM EN ++
Sbjct: 449 NTLIDAYGRTGQLEKCFIVLSEMQENGLK 477
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 132/288 (45%), Gaps = 8/288 (2%)
Query: 195 KVSTCNALIWEVSRGKGVISG--YEIYREVFGLDSDATAGI---GKDVKRVVRVRPNVHT 249
++ +AL+ E++ K V G Y I + + D+ A + GK +K V + +T
Sbjct: 285 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGD--YT 342
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ G ++G E+V + G P Y+ L+ +C+ + A + +M+
Sbjct: 343 CSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK 402
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
++++ D + YN +I G C+ + A++ EM +GV + TF L++ Y R G ++
Sbjct: 403 SRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE 462
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+V ++M G +P + ++ C ++ EA+ IL K + P + Y +
Sbjct: 463 KCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPNAQVYNAI 521
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
I E G ++A + +M G PS+ Y+ I G + + A
Sbjct: 522 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 569
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 129/264 (48%), Gaps = 8/264 (3%)
Query: 236 DVKRVVRV------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP-DCYSYSVL 288
DV+R + RP+ +N + G + + M R G P + +SY+V+
Sbjct: 147 DVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVV 206
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+A R +A ++++EM ++ V + + YNT+I G + G++ +M G+
Sbjct: 207 IAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGL 266
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+ +++T+ L++G CRAG + + ++M + P+G T +L L + +A+
Sbjct: 267 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL-SRNGDSKAML 325
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
L + +K G+ + + L+ GLC++GK+ A +V +V G P+ IY+ I+GY
Sbjct: 326 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 385
Query: 469 MKEGNVEMATMLRKEMFENQVRQE 492
+ G +E A +M ++ +
Sbjct: 386 CQTGELEGAFSTFGQMKSRHIKPD 409
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 124/255 (48%), Gaps = 8/255 (3%)
Query: 245 PNVH---TFNALMVGFYREGA-FEKVEDVWVEMAR---LGCEPDCYSYSVLMAVFCEERR 297
P+V ++N ++ R G + + +M+R P+ SY+++M C RR
Sbjct: 71 PDVRDAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRR 130
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
EA L M+ V DVV Y T+I G C+ E+ A E EM SGV + + +
Sbjct: 131 TDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSC 190
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L+ GYCR+G V+ +M R G EP+ I +LC K R+ +A+ + K +V+
Sbjct: 191 LLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKV-KDIMVQR 249
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
GL P +Y LI LC+EG + EAL ++ EM KG P + Y+ I G ++ A
Sbjct: 250 GLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGA 309
Query: 478 TMLRKEMFENQVRQE 492
L +EM + E
Sbjct: 310 MGLLEEMIQGDTLVE 324
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 127/252 (50%), Gaps = 3/252 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV ++ L+ G+ R G ++ V V+ EM+RLG EPD ++ + C++ R+ +A
Sbjct: 181 VHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAV 240
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+ + M + +E +VV YN +I C+ G + A EM GV VT+ L+ G
Sbjct: 241 KVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGL 300
Query: 363 CRAGDVDSAILVYNDMCRKG--FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
++D A+ + +M + EP+ T +I LC R+ +A+ + + + + G
Sbjct: 301 SGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISV-REMMAERGCM 359
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y +LI G K+ A+ + +E++ G EP YS I+G+ K V+ A M
Sbjct: 360 CNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMF 419
Query: 481 RKEMFENQVRQE 492
+ M + +R E
Sbjct: 420 LRTMTQRGIRAE 431
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 119/246 (48%), Gaps = 1/246 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VR +V T+ L+ G + ++ EM G P+ YS L+ +C R ++
Sbjct: 146 VRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVS 205
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++EEM VE DV+ + I C+ G + +A + M G+E + VT+ L+N
Sbjct: 206 KVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCL 265
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF-P 421
C+ G V A+ + N+M KG P+ T LI L + A+ +L+ + L P
Sbjct: 266 CKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEP 325
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
++ +I GLC+ G+M +A+ V+ M +G +L Y+ I G+++ V MA L
Sbjct: 326 DVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLM 385
Query: 482 KEMFEN 487
E+ +
Sbjct: 386 SELISS 391
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 146/335 (43%), Gaps = 23/335 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR---------------GKGVISGYEIYR 220
+I V + +++ RGL V T N LI + + KGV Y
Sbjct: 235 RIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYN 294
Query: 221 EVFG-----LDSDATAGIGKD-VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA 274
+ L+ D G+ ++ ++ V P+V TFN+++ G + G + V MA
Sbjct: 295 TLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMA 354
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
GC + +Y+ L+ F ++ A L E+ +E D Y+ +I GF ++ E+
Sbjct: 355 ERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVD 414
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
RAE F R M G+ + + L+ C+ G ++ A++++N+M + ++
Sbjct: 415 RAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMM 473
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
C + A +L+ ++ GL P +Y LI + G +EEA +V +M GF
Sbjct: 474 YGACKSGDIKAAKQLLQ-DMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGF 532
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
P + ++ + I GY EG + L EM V
Sbjct: 533 VPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNV 567
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 3/245 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPN ++ +M G ++ + M G D +Y L+ C+ + A +
Sbjct: 112 RPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALE 171
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L EM V +V+ Y+ ++ G+C G + F EM GVE + F ++ C
Sbjct: 172 LLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLC 231
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G + A+ V + M ++G EP T VLI LC + V EAL L+ + G+ P
Sbjct: 232 KKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREAL-ALRNEMDDKGVAPDV 290
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKG--FEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI GL +M+ A+ + EM+ EP + +++ I G K G + A +R
Sbjct: 291 VTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVR 350
Query: 482 KEMFE 486
+ M E
Sbjct: 351 EMMAE 355
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 121/291 (41%), Gaps = 50/291 (17%)
Query: 94 FTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRE 153
Q +L + + ++ ++IH L + IG R I V E R
Sbjct: 316 MIQGDTLVEPDVVTFNSVIHGLCK---IGRMRQAISVREMMAE---------------RG 357
Query: 154 CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI------WEVS 207
C ++ LI L V K+ ++++ L+S GL T + LI WEV
Sbjct: 358 CMCNLVTYNYLIGGFLRV---HKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVD 414
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
R E+F L + GI R + + L+ + G E+
Sbjct: 415 RA-----------EMF-LRTMTQRGI----------RAELFHYIPLLAALCQLGMMEQAM 452
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
++ EM + C D +YS +M C+ ++ A++L ++M D+ + D V Y+ +I F
Sbjct: 453 VLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMF 511
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
++G++ AE ++M SG F+ L+ GY G ++ + + ++M
Sbjct: 512 AKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEM 562
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 196/449 (43%), Gaps = 61/449 (13%)
Query: 13 VSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPT 72
++KP P + L +FS+ SS + ++ +S ++ R+ SR LTP
Sbjct: 57 ITKPLPFLRTLHKFSSYSS-----KGDRSDSSSISCSSNIRNHSRM----------LTPA 101
Query: 73 QFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRAR-------LIGPAR 125
+ ++ + + + LA+ F + KHS S+Y T+I L RAR LI R
Sbjct: 102 RVHKL-IASQTDALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMR 160
Query: 126 ------------DVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV--FDLLIKCCLEV 171
D+I + + +K F ++ E G P F++L+ +E
Sbjct: 161 KDGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQML----EFGYEPLAKHFNVLLIVLIEH 216
Query: 172 KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA 231
K +E T + + + L G+S T N LI + Y ++ ++
Sbjct: 217 KCLE---TALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQG----- 268
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
P+V T++ LM G R+ + V EM G PD +Y+ L+
Sbjct: 269 -----------CIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNS 317
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C + +REA +L +M+ DV+ YNT+I GFC G A + R+M +G +
Sbjct: 318 LCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPN 377
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
++++ LVNG C G D A +M GF P S +LI LC++ +V EA ++L
Sbjct: 378 ALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVL- 436
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
+ K L P E ++ L+ +CE+ + E
Sbjct: 437 VMMTKQTLAPHESTWSVLLMRICEDSQTE 465
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
+M G EP ++VL+ V E + + A L++++ + + + YN +I C
Sbjct: 193 QMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRAHCHSD 252
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+++ A F +M G T+ L+ G CR V +A+ V ++M KG+ P+ T
Sbjct: 253 KLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYN 312
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
L+ LC K + EA +L +++ G P +Y +I G C EG+ +A ++ +M
Sbjct: 313 TLLNSLCRKMNLREAYRLL-SKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPE 371
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
G P+ Y ++G EG + A +EM N
Sbjct: 372 NGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISN 407
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 113/239 (47%), Gaps = 1/239 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T++ L+ R F+ +E + +M + GC + ++ ++ E EA K + +M
Sbjct: 135 TYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQM 194
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ E +N ++ E + A F+++ G+ ++ T+ L+ +C + +
Sbjct: 195 LEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRAHCHSDKL 254
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A ++N M ++G P+ T +L+ LC K +V AL +L + K G P +Y
Sbjct: 255 SHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNK-GYVPDALTYNT 313
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
L+ LC + + EA ++ ++M G P + Y+ I G+ +EG A + ++M EN
Sbjct: 314 LLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPEN 372
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 4/205 (1%)
Query: 283 YSYSVLMAVFCE---ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
+SYS + C+ R+ + E L ++MR + + II + E+G A +
Sbjct: 131 HSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPNEAIKA 190
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F +M G E + F L+ +++A+ ++ + G P T +LI C
Sbjct: 191 FHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRAHCH 250
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
++ A L ++ K G P ++Y L++GLC + +++ AL V EM+ KG+ P
Sbjct: 251 SDKLSHAY-FLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDAL 309
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ ++ ++ N+ A L +M
Sbjct: 310 TYNTLLNSLCRKMNLREAYRLLSKM 334
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 128/233 (54%), Gaps = 1/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N +M G + G E+ ++ EM RLGC P+ S++ ++ C++ ++ +A ++
Sbjct: 113 PDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQV 172
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM +++ D +Y +I G + G++ A + FR M SG+ S+VT+ +++G C
Sbjct: 173 FHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCL 232
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A +D A+ ++ M KG P T +LI C + ++ EA +LK R+ G P
Sbjct: 233 AYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLK-RMTDDGHVPDVV 291
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI GLC ++++A + +MV + +P++ + I G K G ++ A
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 114/244 (46%), Gaps = 1/244 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RP+ TFN L+ + G ++ + M G PD +YS L++ C R+ +A
Sbjct: 252 RPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 311
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L E+M + + VV NT+I G C+ G + A E M SG VT+ LV+G+C
Sbjct: 312 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 371
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
RAG + A + +DM +G P T L+ LC R+ EA + A++ G P
Sbjct: 372 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVF-AQMKSSGCAPNL 430
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI G C G+++ LK+ EMV G P +Y K G A + +E
Sbjct: 431 FTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE 490
Query: 484 MFEN 487
E+
Sbjct: 491 GRES 494
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+N ++ G ++ +++ M GC P +++++L+ C+ +M EA
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAF 275
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L + M D DVV Y+T+I G C I + A +M + + VT L++G
Sbjct: 276 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 335
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+AG + A V + M G P+ T L+ C + A ++L V + GL P
Sbjct: 336 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR-GLAPN 394
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ GLC+ ++ EA V A+M G P+L Y+A I G+ G V+ L
Sbjct: 395 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 454
Query: 483 EM 484
EM
Sbjct: 455 EM 456
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 133/269 (49%), Gaps = 7/269 (2%)
Query: 225 LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+D A AG D + + + V P+ + +L+ G +F+ +++ +M R GC
Sbjct: 17 IDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGC 76
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P +Y+V++ C+ + EA L ++M + DVV YNT++ G C+ G + A
Sbjct: 77 PPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALL 136
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F EM G + + ++ G C+ +D A V+++M + P+ + +LI L
Sbjct: 137 LFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLA 196
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
++ EA + + R++ G+ P+ +Y +I G+C ++EAL++ M KG PS
Sbjct: 197 KAGKLNEAYKLFR-RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++ ID + K G ++ A L K M ++
Sbjct: 256 FTFNILIDAHCKRGKMDEAFRLLKRMTDD 284
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 120/246 (48%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N ++ + G E+ D+ +M G PD +Y+ +M C+ R+ EA L
Sbjct: 78 PSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLL 137
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM + ++NTII G C+ ++ +A + F EM + S ++ L++G +
Sbjct: 138 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAK 197
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG ++ A ++ M G P T V+I +C + EAL++ K+ K G P+
Sbjct: 198 AGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK-GCRPSRF 256
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI C+ GKM+EA ++ M G P + YS I G V+ A L ++M
Sbjct: 257 TFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 316
Query: 485 FENQVR 490
+ Q +
Sbjct: 317 VKRQCK 322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 11/255 (4%)
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
VKR + +P V T N L+ G + G ++ +V M G PD +Y+ L+ C
Sbjct: 317 VKR--QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ A +L +M + + +VV Y ++ G C+ + A F +M SG + T+
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 434
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA---- 412
L+ G+C AG VD + ++ +M G P+ L ELC R AL+IL+
Sbjct: 435 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494
Query: 413 -RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
R +G ++ Y F + GL + GKME AL +MV G P+ E ++ + G K
Sbjct: 495 LRSEAWG----DEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKS 550
Query: 472 GNVEMATMLRKEMFE 486
G A + +E+ +
Sbjct: 551 GQGGEARAVLEEIMD 565
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 174/432 (40%), Gaps = 76/432 (17%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRS---PEN----------------DPKLKLFEVL 147
SY +I L++A + ARD+ + L S P D +LF +
Sbjct: 12 SYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
+ R C +P ++++I + +E E C D+++ ++ G V T N ++ +
Sbjct: 72 NR--RGCPPSPVTYNVIIDASCKRGMLE--EAC-DLIKKMIEDGHVPDVVTYNTVMDGLC 126
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
+ V ++ E+ L PN + N +++G ++ ++
Sbjct: 127 KSGRVEEALLLFNEMERLG----------------CTPNRRSHNTIILGLCQQSKIDQAC 170
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
V+ EM PD +SY +L+ + ++ EA KL+ M D + V YN +I G
Sbjct: 171 QVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGM 230
Query: 328 CEIGEMARAEEFFREMGLSGVESSS----------------------------------- 352
C + A E F+ M G S
Sbjct: 231 CLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDV 290
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ L++G C VD A + DM ++ +P T LI LC R+ EA ++L A
Sbjct: 291 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 350
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+V G P +Y L+ G C G+ E A ++ ++MV +G P++ Y+A + G K
Sbjct: 351 -MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 409
Query: 473 NVEMATMLRKEM 484
+ A + +M
Sbjct: 410 RLPEACGVFAQM 421
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 7/251 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ ++ L+ G + G D++ ++ G P +Y+ L+ C +A
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ +M + V YN II C+ G + A + ++M G VT+ +++G
Sbjct: 66 ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVKFGL 419
C++G V+ A+L++N+M R G P + +I LC + ++ +A + ++AR +
Sbjct: 126 CKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIP--- 182
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P SY LI GL + GK+ EA K+ M+ G PS Y+ I G ++ A
Sbjct: 183 -PDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241
Query: 480 LRKEMFENQVR 490
L K M R
Sbjct: 242 LFKSMRSKGCR 252
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 96/177 (54%), Gaps = 1/177 (0%)
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M ++NV D +Y +I G + G++ A + F+++ SGV S+V + L++G C A
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
D A ++ DM R+G P T V+I C + + EA D++K ++++ G P +Y
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIK-KMIEDGHVPDVVTYN 119
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ GLC+ G++EEAL + EM G P+ ++ I G ++ ++ A + EM
Sbjct: 120 TVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 39/271 (14%)
Query: 98 KSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSA 157
K CK ++ + T+IH L +A I AR+V+ A+ S P + + LV + G
Sbjct: 318 KRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD-AMVSSGQSPDVVTYNTLVHGHCRAG-- 374
Query: 158 PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
+ E +++ +++RGL+ V T AL+ + + +
Sbjct: 375 ------------------QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 416
Query: 218 IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
++ + + S A PN+ T+ AL++GF G + ++ EM G
Sbjct: 417 VFAQ---MKSSGCA-------------PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 460
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD--KNVEHDVVAYNTIIGGFCEIGEMAR 335
PD Y L A C+ R A ++ E R+ ++ Y + G + G+M
Sbjct: 461 ISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEM 520
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
A F R+M G + LV G C++G
Sbjct: 521 ALGFVRDMVRGGQLPAPERCASLVAGLCKSG 551
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
M + P+ + +LI L ++ +A D+ + +++ G+ P+ +Y LI GLC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQ-KLLHSGVTPSTVAYTSLIHGLCMAN 59
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++A ++ A+M +G PS Y+ ID K G +E A L K+M E+
Sbjct: 60 SFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIED 109
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 128/242 (52%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+R + T+ L+ G R G EK E+V ++ G P SY++L+ +C+E +++A
Sbjct: 321 IRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAI 380
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
E+M ++ +E + + +NT+I FCE GE+ AE + R M GV + T+ L+NGY
Sbjct: 381 LTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGY 440
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G ++M + G +P + LI LC R++ +A +I+ A ++ G+ P
Sbjct: 441 GQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDA-EIVLADMIGRGVSPN 499
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ Y LI+ C K+++A + EM+ G + +L Y+ I+G + G V+ A L
Sbjct: 500 AEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFL 559
Query: 483 EM 484
+M
Sbjct: 560 QM 561
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 196/450 (43%), Gaps = 69/450 (15%)
Query: 78 ALGLKNNPHL--ALRFFSFTQHKSLCKHS------LSSYATIIHILSRARLIGPARDVIR 129
AL L+ N H ++ FF +Q +LC+ L + ++SR R I AR +R
Sbjct: 8 ALRLRPNSHFNNSISFFC-SQSLTLCESDPQYQKRLQKVQKLETLISRGRTI-TARRFLR 65
Query: 130 VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMS 189
L + L V S PF D L+ C K +++ D+ +
Sbjct: 66 SLLLTKTAFSSLSELHAHV-------SKPFFSDNLLWLCSVSKMLDE---ATDLYSTMRK 115
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRVRPNV 247
G + N L+ + + ++ +V G DA A GK V+ V ++
Sbjct: 116 DGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVA-YGKAVQAAVMLKD-- 172
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
+K ++ M + G P ++Y++++ C+ RR+++A KL++E
Sbjct: 173 ---------------LDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDE 217
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M +N+ + V YNT+I G+C++G + A F M VE + VT+ L+NG C +G
Sbjct: 218 MIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGR 277
Query: 368 VDSAILVYNDMCRKGFEPEG----------------------------STIEVLIGELCD 399
VD A V +M GF P G T +L+ LC
Sbjct: 278 VDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCR 337
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
R+ +A ++L A++V+ G+ P++ SY L+ C+EG +++A+ +M +G EP+
Sbjct: 338 VGRIEKAEEVL-AKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRI 396
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ I + + G V+ A + M E V
Sbjct: 397 TFNTVISKFCETGEVDHAETWVRRMVEKGV 426
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 131/258 (50%), Gaps = 10/258 (3%)
Query: 237 VKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
V+R+V V P V T+N+L+ G+ ++G F + + EM + G +P+ SY L+ C+
Sbjct: 418 VRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCK 477
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+R++ +AE + +M + V + YN +I C + ++ A FF EM SG++++ VT
Sbjct: 478 DRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVT 537
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI---GELCDKRRVFEALDILK 411
+ L+NG R G V A ++ M KG P+ T LI + + ++ E D +K
Sbjct: 538 YNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMK 597
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
G+ PT ++ LI +EG + K+ EM+ P +Y+ I Y ++
Sbjct: 598 I----LGIKPTVGTFHPLIYACRKEGVVTMD-KMFQEMLQMDLVPDQFVYNEMIYSYAED 652
Query: 472 GNVEMATMLRKEMFENQV 489
GNV A L ++M + V
Sbjct: 653 GNVMKAMSLHQQMVDQGV 670
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 179/421 (42%), Gaps = 65/421 (15%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
+L+ +A +I +R + + ++ A+ + D +L + +VK G + F ++L
Sbjct: 141 TLAVFADVIDSGTRPDAVAYGK-AVQAAVMLKDLDKGFELMKSMVKD--GMGPSVFAYNL 197
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
++ +V+ I+ D ++ R + T N LI G + G E E
Sbjct: 198 VLGGLCKVRRIKDARKLFD---EMIQRNMVPNTVTYNTLI----DGYCKVGGIE---EAL 247
Query: 224 GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
G K+ + V N+ T+N+L+ G G + +V +EM G P +
Sbjct: 248 GF---------KERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGF 298
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
L VF + + L++ K + D Y ++ G C +G + +AEE ++
Sbjct: 299 ----LSFVFDDHSNGAGDDGLFD---GKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKL 351
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
+GV S +++ LVN YC+ GDV AIL M +G EP T +I + C+ V
Sbjct: 352 VENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEV 411
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKG------------------------------- 432
A ++ R+V+ G+ PT ++Y LI G
Sbjct: 412 DHAETWVR-RMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGS 470
Query: 433 ----LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LC++ K+ +A V A+M+G+G P+ EIY+ I+ ++ A EM ++
Sbjct: 471 LINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSG 530
Query: 489 V 489
+
Sbjct: 531 I 531
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 16/285 (5%)
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGA 262
G+GV EIY + +++ + KD R + + T+N L+ G R G
Sbjct: 493 GRGVSPNAEIYNML--IEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGR 550
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
+K ED++++MA GC PD +Y+ L++ + + ++ +L+++M+ ++ V ++
Sbjct: 551 VKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHP 610
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I C + ++ F+EM + + ++ Y G+V A+ ++ M +G
Sbjct: 611 LIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQG 669
Query: 383 FEPEGSTIEVLIGELCDKRRVFEA---LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+ + T LI RRV E +D +KA+ GL P +Y LIKGLC+
Sbjct: 670 VDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAK----GLVPKVDTYNILIKGLCDLKDF 725
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
A EMV +G ++ + I G +EG + A ++ E+
Sbjct: 726 NGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSEL 770
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 168/390 (43%), Gaps = 44/390 (11%)
Query: 64 LCRSGLTPT--QFSQIALGLKNNPHLALRFFSFTQH--KSLCKHSLSSYATIIHILSRAR 119
+ G++PT ++ + G H +R F F K+ K ++ SY ++I+ L + R
Sbjct: 421 MVEKGVSPTVETYNSLINGYGQKGHF-VRCFEFLDEMDKAGIKPNVISYGSLINCLCKDR 479
Query: 120 LIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIET 179
+ A +++ + P +++ +L++ C L K++
Sbjct: 480 KLIDA-EIVLADMIGRGVSPNAEIYNMLIEA---------------SCSLS-----KLKD 518
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
++ G+ + T N LI + R V +++ ++ AG G
Sbjct: 519 AFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQM--------AGKG----- 565
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
P+V T+N+L+ G+ + +K +++ +M LG +P ++ L+ C + +
Sbjct: 566 ---CNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVV 621
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+K+++EM ++ D YN +I + E G + +A ++M GV+ VT+ L+
Sbjct: 622 TMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLI 681
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
Y R V + +DM KG P+ T +LI LCD + F +V+ GL
Sbjct: 682 LAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKD-FNGAYFWYREMVERGL 740
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
LI GL EEG + EA V +E+
Sbjct: 741 LLNVSMCYQLISGLREEGMLREAQIVSSEL 770
>gi|302791145|ref|XP_002977339.1| hypothetical protein SELMODRAFT_32460 [Selaginella moellendorffii]
gi|300154709|gb|EFJ21343.1| hypothetical protein SELMODRAFT_32460 [Selaginella moellendorffii]
Length = 336
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 121/244 (49%), Gaps = 5/244 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ T+N+L+ G + + EM GC PD +Y+ L+ C+ R+ EA +L
Sbjct: 65 PNMVTYNSLIHGLCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEANRL 124
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM+ K DV+ Y+ +IGGFC++ + A F +M VTF LV GYC
Sbjct: 125 FGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCN 184
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG VD A + +M P+ T L+ + C +R+ EA +LK R+ K G K
Sbjct: 185 AGLVDDAERLLEEMVASDCSPDVYTYTSLVDDFCKVKRMVEAHRVLK-RMAKGGSNKNCK 243
Query: 425 SYMF----LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+ MF ++ GLC G+M AL++ + G P +IY A I G + + A +
Sbjct: 244 ADMFAYRMMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELRKAMEV 303
Query: 481 RKEM 484
+EM
Sbjct: 304 LEEM 307
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 39/237 (16%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+++T+N L+ G + G + ++ EM C PD +YS L+ FC+ R+ A L
Sbjct: 100 PDINTYNTLIDGLCKTGRVPEANRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTL 159
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN---- 360
+++M + DVV + T++ G+C G + AE EM S T+ LV+
Sbjct: 160 FDDMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDDFCK 219
Query: 361 -----------------------------------GYCRAGDVDSAILVYNDMCRKGFEP 385
G CR G + +A+ + + + G P
Sbjct: 220 VKRMVEAHRVLKRMAKGGSNKNCKADMFAYRMMMDGLCRTGRMSAALELLEAIKQSGTPP 279
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
LI LC + + +A+++L+ + P K+Y +I+ L EG+ E+A
Sbjct: 280 RHDIYVALIRGLCQGKELRKAMEVLEEMTLSRKGRPNAKAYKAVIQELAREGRHEKA 336
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 6/171 (3%)
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
D V +N I GF + G + + +M + T+ L+ + G++ AI V+
Sbjct: 1 DAVCWNAIATGFSQCGLLDETTKILDKMPAWNL----ATWNTLLTSHSLQGNLTGAIRVF 56
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
++M K P T LI LC V L +L + G P +Y LI GLC+
Sbjct: 57 HEMPDKNL-PNMVTYNSLIHGLCMTNGVDSTL-LLMEEMTATGCLPDINTYNTLIDGLCK 114
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
G++ EA ++ EM K P + YS I G+ K + MA L +M +
Sbjct: 115 TGRVPEANRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLK 165
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 202/459 (44%), Gaps = 44/459 (9%)
Query: 67 SGLTPTQFSQIALGL----KNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIG 122
+GL P F+ +L + + + A + F K C+ + +Y +IH L R I
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKG-CRRNEVAYTHLIHGLCVERRID 305
Query: 123 PARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIE------- 175
A D+ V ++ + P ++ + VL+K CGS L + +E K I+
Sbjct: 306 EAMDLF-VKMKDDDCYPTVRTYTVLIKAL--CGSERKSEALNLVKEMEEKGIKPNIHTYT 362
Query: 176 ----------KIETCVDIVRMLMSRGLSVKVSTCNALI---------------WEVSRGK 210
K+E +++ ++ +GL V T NALI E+ +
Sbjct: 363 VLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESR 422
Query: 211 GVISGYEIYREVFG--LDSDATAGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAFEKVE 267
+ Y E+ + +G K + R V P+V T+N+L+ G R G F+
Sbjct: 423 NLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
+ M G PD ++Y+ ++ C+ +R+ EA L++ + K+V +VV Y +I G+
Sbjct: 483 RLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGY 542
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ G++ A +M +S+TF L++G C G + A L+ M + +P
Sbjct: 543 CKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTV 602
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
ST +LI L K F+ +++ G P +Y I+ C EG++++A + A
Sbjct: 603 STDTILIHRLL-KDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVA 661
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+M G P L YS+ I GY G A ++ K M +
Sbjct: 662 KMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHD 700
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 130/250 (52%), Gaps = 1/250 (0%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
D + KD ++ + + +N L+ R G ++++ V++EM P+ Y+Y+
Sbjct: 164 DLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNK 223
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
++ +C+ + EA + + + ++ D Y ++I G+C+ ++ A + F+EM L G
Sbjct: 224 MVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKG 283
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ V + HL++G C +D A+ ++ M P T VLI LC R EAL
Sbjct: 284 CRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEAL 343
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+++K K G+ P +Y LI LC + K+E+A ++ +M+ KG P++ Y+A I+G
Sbjct: 344 NLVKEMEEK-GIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALING 402
Query: 468 YMKEGNVEMA 477
Y K G +E A
Sbjct: 403 YCKRGMIEDA 412
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 122/532 (22%), Positives = 214/532 (40%), Gaps = 66/532 (12%)
Query: 2 AVQILKHIIFSVSKPKPKPQLLSQFSTSSS---TPPSDQSHNLIATVVSLLTHHRSKSRW 58
AV+++K FS P P QF + S P D+S +V L SK W
Sbjct: 19 AVEVVKKK-FSADVKIPSPFTRRQFCSVSPLIRNLPEDESDP--TSVPHRLFSILSKPNW 75
Query: 59 NHLLSLCR--SGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILS 116
+ SL ++P+ S + L +P AL F + KHS+ SYA+++ +L
Sbjct: 76 HKCPSLKSMVPAISPSHVSSL-FSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLI 134
Query: 117 RARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKC--------- 167
+G + + ++S ++ L + + S + L+I C
Sbjct: 135 NNGYVGVVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLA 194
Query: 168 --------------------CLEVKNIEK----------IETCVDIVRMLMSRGLSVKVS 197
C + K +E V M++ GL
Sbjct: 195 RFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFF 254
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T +LI + K + S +++++E+ + R N + L+ G
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFKEM----------------PLKGCRRNEVAYTHLIHGL 298
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
E ++ D++V+M C P +Y+VL+ C R EA L +EM +K ++ ++
Sbjct: 299 CVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNI 358
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
Y +I C ++ +A E +M G+ + +T+ L+NGYC+ G ++ A+ V
Sbjct: 359 HTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVEL 418
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
M + P T LI C KR V +A+ +L ++++ + P +Y LI G C G
Sbjct: 419 MESRNLRPNTRTYNELIKGYC-KRNVHKAMGVLN-KMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ A ++ + M +G P Y++ ID K VE A L + + V
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDV 528
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 18/264 (6%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ ++P V T L+ ++G F+ + +M G +PD ++Y+ + +C E R+++
Sbjct: 596 IDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQD 655
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
AE + +M++ V D+ Y+++I G+ ++G A + M +G E S TF L+
Sbjct: 656 AEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIK 715
Query: 361 ---------------GYCRAGDV---DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
G C ++ D + + M G P + E L+ +C+
Sbjct: 716 HLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGN 775
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ A + K G+ P+E + L+ C+ K EA KV +M+ G P LE
Sbjct: 776 LRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCK 835
Query: 463 AFIDGYMKEGNVEMATMLRKEMFE 486
I K+G E T + + + +
Sbjct: 836 ILICRLYKKGEKERGTSVFQNLLQ 859
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 18/239 (7%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TFNAL+ G +G ++ + +M ++ +P + ++L+ ++ A +
Sbjct: 565 PNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRR 624
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++M + D Y T I +C G + AE+ +M +GV T+ L+ GY
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGD 684
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR-----------------RVFEAL 407
G +SA +V M G EP T LI L + + F+ +
Sbjct: 685 LGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIV 744
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK-GFEPSLEIYSAFI 465
L ++V+ G+ P KSY L+ G+CE G + A KV M K G PS +++A +
Sbjct: 745 VELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALL 803
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 13/271 (4%)
Query: 222 VFGLDSDATAGIGKD--VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
+F LD D + + + R + +V+++ +L+ G V + + M +
Sbjct: 96 LFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIK---- 151
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
C S + + V R+M + E E++ K + + YNT++ G + ++
Sbjct: 152 -SCDSVADTLFVLDLCRKMNKDESF--ELKYKLI---IGCYNTLLNSLARFGLVDEMKQV 205
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+ EM V + T+ +VNGYC+ G+V+ A + + G +P+ T LI C
Sbjct: 206 YMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQ 265
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
++ + A + K +K G E +Y LI GLC E +++EA+ + +M P++
Sbjct: 266 RKDLDSAFKVFKEMPLK-GCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVR 324
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
Y+ I A L KEM E ++
Sbjct: 325 TYTVLIKALCGSERKSEALNLVKEMEEKGIK 355
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 175/392 (44%), Gaps = 38/392 (9%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C + +Y +I L AR + A + ++S + P + L+ + +CG
Sbjct: 295 CGPDVVTYTVLIDALCTARKLDDAM-CLFTKMKSSSHKPDKVTYVTLLDKFSDCG----- 348
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
+ +EKI T ++ + G + V T L+ + + + +++
Sbjct: 349 ---------HLDKVEKIWTEME------ADGYAPDVVTFTILVNALCKAGRINEAFDLL- 392
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
D R V PN+HT+N L+ G R + D++ M LG EP
Sbjct: 393 ---------------DTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEP 437
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
Y+Y +L+ + +A + +E+M+ + + ++VA N + E+G + A+ F
Sbjct: 438 TAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMF 497
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
E+ SG+ SVT+ ++ Y + G VD AI + ++M + EP+ I LI L
Sbjct: 498 NELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKA 557
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
RV EA + R+ + L PT +Y L+ GL +EG++++A+++ M G G P+
Sbjct: 558 GRVEEAWQMF-CRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTIT 616
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
++ +D K V++A + +M R +
Sbjct: 617 FNTLLDCLCKNDEVDLALKMFYKMTTMNCRPD 648
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 136/278 (48%), Gaps = 17/278 (6%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
+++ R ++S GL + T +AL+ + + + + V GL + +
Sbjct: 214 LEVYRRMVSEGLKPSLKTFSALMVASGKRRNI-------KTVMGLLEEMES--------- 257
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ +RPN++T+ + R+G ++ + M GC PD +Y+VL+ C R++ +
Sbjct: 258 MGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDD 317
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L+ +M+ + + D V Y T++ F + G + + E+ + EM G VTF LVN
Sbjct: 318 AMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVN 377
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
C+AG ++ A + + M ++G P T LI L R+ +ALD+ + + G+
Sbjct: 378 ALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLF-SNMESLGVE 436
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
PT +Y+ LI + G +AL+ +M +G P++
Sbjct: 437 PTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNI 474
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 156/342 (45%), Gaps = 22/342 (6%)
Query: 145 EVLVKTYRECGSAPF--VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
V VK +E G P V++LLI LEV N+E ++ + S G + T N+L
Sbjct: 775 NVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVE---VAWNLFEEMKSAGCAPDTFTYNSL 831
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
I + + +++Y E+ T G +PN T+N ++ +
Sbjct: 832 IDAHGKSGKINELFDLYDEML------TRG----------CKPNTITYNMVISNLVKSNR 875
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
+K D++ + P ++ L+ + R+ +A ++++ M + YN
Sbjct: 876 LDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNI 935
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
++ G+ ++G + A EFF+ M G+ ++ LV+ C AG VD A+ + + + G
Sbjct: 936 LVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAG 995
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+P+ ++I L +R EAL + + G+ P +Y LI L G +EEA
Sbjct: 996 LDPDLVAYNLMINGLGRSQRTEEALSLFH-EMQNRGIVPDLYTYNSLILNLGIVGMIEEA 1054
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
K+ E+ G +P++ Y+A I GY GN E+A + K+M
Sbjct: 1055 GKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKM 1096
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 135/286 (47%), Gaps = 17/286 (5%)
Query: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
GVI +I + F + D +G ++ R + +M G E EK
Sbjct: 692 GVIKSGQI-EDAFRITEDFFYQVGSNIDRSF--------WEDVMGGILTEAGTEKA---I 739
Query: 271 VEMARLGCEPDCYSYSVLMA---VFCEERRMREAEKLWEEM-RDKNVEHDVVAYNTIIGG 326
+ RL C C SVL+ V C+ ++ A ++ + ++ V+ + YN +I G
Sbjct: 740 LFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDG 799
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
F E+ + A F EM +G + T+ L++ + ++G ++ +Y++M +G +P
Sbjct: 800 FLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPN 859
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T ++I L R+ +A+D L +V PT ++ LI GL + G++++A ++
Sbjct: 860 TITYNMVISNLVKSNRLDKAMD-LYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMF 918
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
MV G P+ IY+ ++GY K G+V+ A K M + +R +
Sbjct: 919 DGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPD 964
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 192/496 (38%), Gaps = 89/496 (17%)
Query: 34 PSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIAL----GLKNNPHLAL 89
P+ ++N + + LL +R + ++ G+ PT ++ I L G +P AL
Sbjct: 402 PNLHTYNTL--ISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKAL 459
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVK 149
F + + + + ++ A++ + RL G A+ + L+S P + +++K
Sbjct: 460 ETFEKMKARGIAPNIVACNASLYSLAEMGRL-GEAKAMFN-ELKSSGLAPDSVTYNMMMK 517
Query: 150 TYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG 209
Y + G LL + K++ D++ N+LI + +
Sbjct: 518 CYSKVGQVDEAIKLL-------SEMSKVQCEPDVI-------------VINSLIDTLYKA 557
Query: 210 KGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDV 269
V ++++ + + + P V T+N L+ G +EG +K +
Sbjct: 558 GRVEEAWQMFCRM----------------EEMNLAPTVVTYNILLAGLGKEGQIQKAVQL 601
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+ M GC P+ +++ L+ C+ + A K++ +M N DV+ +NTII GF +
Sbjct: 602 FESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIK 661
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
++ A F +M + VT L+ G ++G ++ A + D F GS
Sbjct: 662 QNQIKNAIWLFHQMK-KLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDF----FYQVGSN 716
Query: 390 IE--------------------VLIGE--------------------LCDKRRVFEALDI 409
I+ +L GE LC ++ A ++
Sbjct: 717 IDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNV 776
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
+ G+ PT K Y LI G E +E A + EM G P Y++ ID +
Sbjct: 777 FVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHG 836
Query: 470 KEGNVEMATMLRKEMF 485
K G + L EM
Sbjct: 837 KSGKINELFDLYDEML 852
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 172/393 (43%), Gaps = 44/393 (11%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
+L +Y T+I L RA + A D+ + S +P + +L+ + + G
Sbjct: 403 NLHTYNTLISGLLRANRLDDALDLFS-NMESLGVEPTAYTYILLIDYHGKSGHPG----- 456
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
K +E E + +RG++ + CNA ++ ++ + ++ E+
Sbjct: 457 --------KALETFEK-------MKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNEL- 500
Query: 224 GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
++G+ P+ T+N +M + + G ++ + EM+++ CEPD
Sbjct: 501 -----KSSGLA----------PDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVI 545
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+ L+ + R+ EA +++ M + N+ VV YN ++ G + G++ +A + F M
Sbjct: 546 VINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESM 605
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G +++TF L++ C+ +VD A+ ++ M P+ T +I + ++
Sbjct: 606 NGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQI 665
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM---VGKGFEPSLEI 460
A+ + +K L P + L+ G+ + G++E+A ++ + VG + S
Sbjct: 666 KNAIWLFHQ--MKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSF-- 721
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+ + G + E E A + + + + ++D
Sbjct: 722 WEDVMGGILTEAGTEKAILFGERLVCRAICKDD 754
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 107/263 (40%), Gaps = 36/263 (13%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +++N L+ + G ++ +V+ M G +P ++S LM + R ++ L
Sbjct: 193 NAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLL 252
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EEM + ++ Y I G++ A + M G VT+ L++ C A
Sbjct: 253 EEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTA 312
Query: 366 GDVDSAIL-----------------------------------VYNDMCRKGFEPEGSTI 390
+D A+ ++ +M G+ P+ T
Sbjct: 313 RKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTF 372
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+L+ LC R+ EA D+L + K G+ P +Y LI GL ++++AL + + M
Sbjct: 373 TILVNALCKAGRINEAFDLLDT-MRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNME 431
Query: 451 GKGFEPSLEIYSAFIDGYMKEGN 473
G EP+ Y ID + K G+
Sbjct: 432 SLGVEPTAYTYILLIDYHGKSGH 454
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 139/337 (41%), Gaps = 47/337 (13%)
Query: 98 KSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRE---- 153
+++CK S II +L + + AR+V + P LK++ +L+ + E
Sbjct: 748 RAICKDD-SVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNV 806
Query: 154 ------------CGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC 199
G AP F ++ LI + KI D+ +++RG T
Sbjct: 807 EVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSG---KINELFDLYDEMLTRGCKPNTITY 863
Query: 200 NALIWEVSRGKGVISGYEIYREV-----------FG--LDSDATAGIGKDVKRVVR---- 242
N +I + + + ++Y + FG +D +G D +
Sbjct: 864 NMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVH 923
Query: 243 --VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
RPN +N L+ G+ + G + + + M + G PD SY++L+ + C R+ +
Sbjct: 924 YGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDD 983
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE---FFREMGLSGVESSSVTFEH 357
A +E+++ ++ D+VAYN +I G +G R EE F EM G+ T+
Sbjct: 984 ALHYFEKLKQAGLDPDLVAYNLMING---LGRSQRTEEALSLFHEMQNRGIVPDLYTYNS 1040
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
L+ G ++ A +Y ++ G +P T LI
Sbjct: 1041 LILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALI 1077
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Query: 238 KRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
KR+V+ +RP++ ++ L+ G + + ++ + G +PD +Y++++
Sbjct: 954 KRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRS 1013
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+R EA L+ EM+++ + D+ YN++I +G + A + + E+ G++ + T+
Sbjct: 1014 QRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTY 1073
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
L+ GY +G+ + A +Y M G +P T L
Sbjct: 1074 NALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 83/187 (44%), Gaps = 1/187 (0%)
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+R+A E+MR+ + +YN +I + G A E +R M G++ S TF
Sbjct: 175 LRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSA 234
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L+ + ++ + + + +M G P T + I L ++ EA I+K R+
Sbjct: 235 LMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMK-RMDDD 293
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P +Y LI LC K+++A+ + +M +P Y +D + G+++
Sbjct: 294 GCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKV 353
Query: 478 TMLRKEM 484
+ EM
Sbjct: 354 EKIWTEM 360
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ +N ++ G R E+ ++ EM G PD Y+Y+ L+ + EA K+
Sbjct: 998 PDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKI 1057
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+EE++ ++ +V YN +I G+ G A +++M + G + ++ TF L N
Sbjct: 1058 YEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPN 1113
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 120/243 (49%), Gaps = 4/243 (1%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMA---RLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++N ++ R G ++ + M+ C P+ SY+VLM C +R +A L
Sbjct: 79 SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
MR V DVV Y T+I G C+ E+ +A E EM SG+E + V + L+ GYC++
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + V+ +M KG EP+ LI LC + +A ++ +V+ GL P +
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDM-MVRRGLEPNVVT 257
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI +C+EG ++EA+ V +M KG P + Y+ I G ++ A L +EM
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317
Query: 486 ENQ 488
+
Sbjct: 318 RGK 320
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 128/259 (49%), Gaps = 2/259 (0%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
+D G+ + + R VR +V T+ L+ G +K ++ EM G EP+ YS
Sbjct: 131 ADQAVGLLRSM-RSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L+ +C+ R + K++ EM +K +E DVV Y +I C++G+ +A M
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+E + VT+ L+N C+ G V AI V M KG P+ T LI L D + EA
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309
Query: 407 LDILKARVVKFGLF-PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+ +L+ V + P ++ +I+GLC+ G+M +A +V+A M G +L Y+ I
Sbjct: 310 MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLI 369
Query: 466 DGYMKEGNVEMATMLRKEM 484
G ++ V A L EM
Sbjct: 370 GGLLRVHKVRKAMELMDEM 388
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 154/330 (46%), Gaps = 21/330 (6%)
Query: 161 FDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
+++LI C C E ++ + +++ + +G++ V T N LI KG+ E+
Sbjct: 258 YNVLINCMCKE----GSVKEAIGVLKKMSEKGVAPDVVTYNTLI------KGLSDVLEMD 307
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
++ L+ GK++ V+PNV TFN+++ G G + V M GC
Sbjct: 308 EAMWLLEEMVR---GKNI-----VKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCM 359
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
+ +Y++L+ ++R+A +L +EM +E D Y+ +I GFC++ ++ RAE+
Sbjct: 360 VNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDL 419
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
M G+E + L+ C G ++ A ++N+M F + +I C
Sbjct: 420 LSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACK 478
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+ A ++LK+ +V GL P +Y +I + G ME A V +M GF P +
Sbjct: 479 AGDLKTAKELLKS-IVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVA 537
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ + I GY +G + L +EM +
Sbjct: 538 VFDSLIQGYSTKGEINKVLELIREMITKNI 567
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 123/245 (50%), Gaps = 3/245 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPN ++ LM + ++ + M G D +Y L+ C+ + +A +
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L EM + +E +VV Y++++ G+C+ G + F EM G+E V + L++ C
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G A V + M R+G EP T VLI +C + V EA+ +LK ++ + G+ P
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLK-KMSEKGVAPDV 290
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMV-GKGF-EPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LIKGL + +M+EA+ + EMV GK +P++ +++ I G G + A +R
Sbjct: 291 VTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVR 350
Query: 482 KEMFE 486
M E
Sbjct: 351 AMMEE 355
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 142/365 (38%), Gaps = 58/365 (15%)
Query: 136 ENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
E D + L E +V+ F+ +I+ + +I ++ + M+ G V
Sbjct: 305 EMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQ---GLCDIGRMRQAFQVRAMMEETGCMVN 361
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
+ T N LI + R V E+ E+ L + P+ T++ L+
Sbjct: 362 LVTYNLLIGGLLRVHKVRKAMELMDEMTSLG----------------LEPDSFTYSILIK 405
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
GF + ++ ED+ M G EP+ + Y L+ CE+ M A L+ EM D N
Sbjct: 406 GFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPL 464
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT--------------------- 354
DVVAY+T+I G C+ G++ A+E + + G+ +VT
Sbjct: 465 DVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVL 524
Query: 355 --------------FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC-- 398
F+ L+ GY G+++ + + +M K + I L L
Sbjct: 525 KQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVAS 584
Query: 399 -DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+ + + ++L A + K + ++ L + + + L +A++ F S
Sbjct: 585 NEGKALLQSLPDFSAEISKGNINSPQELMKVLHNAISFKAPSNQQLHKRAKLNLGTFAGS 644
Query: 458 LEIYS 462
L +S
Sbjct: 645 LASWS 649
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 33/177 (18%)
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
D V+YNT++ C G RA R M L
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEP---------------------------- 107
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
+ CR P + VL+ LC R +A+ +L++ + G+ +Y LI+GLC+
Sbjct: 108 HPACR----PNAVSYTVLMRALCADRLADQAVGLLRS-MRSAGVRADVVTYGTLIRGLCD 162
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
++++A+++ EM G EP++ +YS+ + GY K G E + EM E + +
Sbjct: 163 AAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPD 219
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 208/481 (43%), Gaps = 46/481 (9%)
Query: 12 SVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTP 71
S S +P+ ++ + P ++ + VVS HR +L ++P
Sbjct: 65 SESDVEPRFTVVPGAAQEGLAPGVSEAAERVCRVVSAQPEHRIAP----VLDALGVTVSP 120
Query: 72 TQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVA 131
+++ L N LAL FF + + + ++S + +I L + +
Sbjct: 121 QLVAEVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIK------------ 168
Query: 132 LRSPENDPKLKLFEVLVKTYRECGS--APFVFDLLIKCCLEVKNIEKIETCVDIVRMLMS 189
+ +L LV+ R C S + F ++++ K++ V+ + S
Sbjct: 169 --------QFRLVWSLVEAMR-CRSCLSKDTFKIIVR---RYARARKVKEAVETFEKMSS 216
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
GL +S N LI +S+ K V + I++E+ KR R P++ T
Sbjct: 217 FGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEM---------------KRKGRFIPDLKT 261
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ LM G+ E ++ V+ EM G +PD +Y +L++ FC+ + EA K++ EM
Sbjct: 262 YTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEME 321
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ Y +I G + + A ++F+ SG T ++ YCRA +
Sbjct: 322 ESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFH 381
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + ++M + G P T ++++ L ++ EA ++ + R+ + G P +Y +
Sbjct: 382 HAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQ-RMERDGCEPELNTYTMM 440
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ C +++ ALKV +M KG P + ++SA I+G + +E A + +EM + +
Sbjct: 441 VGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGI 500
Query: 490 R 490
R
Sbjct: 501 R 501
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 114/245 (46%), Gaps = 21/245 (8%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
+I +S + D +K+F + ++ C +P V+ +LI + ++E+++ + ++
Sbjct: 300 LISAFCKSGKCDEAIKVFHEMEES--GCMPSPHVYCMLIN---GLGSMERLDEALKYFQL 354
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
G ++V TCNA+I R E + +D +GIG PN
Sbjct: 355 SKESGFPMEVPTCNAVIGAYCRA------LEFHHAFKMVDEMRKSGIG----------PN 398
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
T++ ++ + E+ +++ M R GCEP+ +Y++++ +FC R+ A K+W+
Sbjct: 399 TRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWK 458
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+M++K V + ++ +I G C + A +F+EM G+ F +L G
Sbjct: 459 QMKEKGVLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGG 518
Query: 367 DVDSA 371
+ A
Sbjct: 519 RITLA 523
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T NA++ + R F + EM + G P+ +Y +++ + ++ EA L++
Sbjct: 364 VPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQ 423
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M E ++ Y ++G FC + A + +++M GV F L+NG C
Sbjct: 424 RMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFDN 483
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
++ A + + +M KG P G L L + R+ A ++ +
Sbjct: 484 RLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQ 528
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
T ++++ R+V EA++ + ++ FGL Y +LI L + ++++A + E
Sbjct: 190 TFKIIVRRYARARKVKEAVETFE-KMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKE 248
Query: 449 MVGKG-FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
M KG F P L+ Y+ ++G+ E ++ M + +EM + ++ +
Sbjct: 249 MKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPD 293
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 158/374 (42%), Gaps = 55/374 (14%)
Query: 155 GSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
G P V ++ LI + N E + D +R ++GL + T N+LI + +
Sbjct: 330 GIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMR---AKGLLPDLITYNSLINGYCKAGNL 386
Query: 213 ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
++ ++ AG+G P V T+N L+ G+ R G E + E
Sbjct: 387 KQALCLFGDL------KRAGLG----------PTVLTYNILIDGYCRLGDLEGARRLKEE 430
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M C PD +Y++LM C R + ++EM K +E D AYNT I IG
Sbjct: 431 MTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGA 490
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A + EM L G+ S +VT+ L++G C+ G + A +++ M G + T
Sbjct: 491 ITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTC 550
Query: 393 LIGELCDKRRVFEALDI--------LKARVVKFGLF------------------------ 420
LI C++ R+ EA +I L VV + +F
Sbjct: 551 LIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEG 610
Query: 421 --PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
P E +Y L+ LC G+ E A + EM+ +G P+ Y+ IDG KEGN A
Sbjct: 611 VEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAI 670
Query: 479 MLRKEMFENQVRQE 492
L EM + + +
Sbjct: 671 RLYCEMHQKGIHPD 684
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 161/363 (44%), Gaps = 26/363 (7%)
Query: 152 RECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRM---------------LMSRGLSV 194
R G P ++++I +EK VDI+R+ L++R
Sbjct: 258 RAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKASAFTYNPLITGLLARDF-- 315
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYREV----FGLDSDATAGIGKDVKRVVRVRPNVHTF 250
V AL+ E+ +G++ Y + F + A + D R + P++ T+
Sbjct: 316 -VEKAGALLLEMEN-EGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITY 373
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
N+L+ G+ + G ++ ++ ++ R G P +Y++L+ +C + A +L EEM +
Sbjct: 374 NSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTE 433
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
++ DV Y ++ G C + +A FF EM G+E + ++ G + +
Sbjct: 434 EDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITN 493
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A + +M +G + T VLI LC + +A +L ++V GL +Y LI
Sbjct: 494 AFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAY-VLWMKMVTDGLRLDCVTYTCLI 552
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
CE G++ EA + MV G PS+ Y+ FI Y + GN+ +A ++M E V
Sbjct: 553 HAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVE 612
Query: 491 QED 493
+
Sbjct: 613 PNE 615
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 120/259 (46%), Gaps = 3/259 (1%)
Query: 228 DATAGIGKDVK-RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
D + KD++ R PN T+N ++ G R+G EK + V++ RL + ++Y+
Sbjct: 246 DQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQL-VDIMRLSKKASAFTYN 304
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L+ + +A L EM ++ + VV YNT+I G + G A+ F EM
Sbjct: 305 PLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAK 364
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+ +T+ L+NGYC+AG++ A+ ++ D+ R G P T +LI C + E
Sbjct: 365 GLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYC-RLGDLEG 423
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
LK + + P +Y L+ G C + EM+ KG EP Y+ I
Sbjct: 424 ARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRIS 483
Query: 467 GYMKEGNVEMATMLRKEMF 485
+ G + A LR+EM
Sbjct: 484 AELTIGAITNAFQLREEMM 502
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 1/226 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ +N + GA + EM G D +Y+VL+ C+ +++A
Sbjct: 471 LEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAY 530
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
LW +M + D V Y +I CE G + A+ F M SG+ S VT+ ++ Y
Sbjct: 531 VLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTY 590
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G++ A + M +G EP T VL+ LC R A +++ GL P
Sbjct: 591 CRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFH-EMLERGLVPN 649
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+ +Y LI G C+EG A+++ EM KG P ++A G+
Sbjct: 650 KYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGF 695
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 131/251 (52%), Gaps = 4/251 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R RP+ + NAL+ G + E + R PD Y+++ +++ C ++R+A
Sbjct: 151 RHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKA 210
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCE---IGEMARAEEFFREMGLSGVESSSVTFEHL 358
+ ++++ + V YN++I G+C+ G M + +EM +G+ ++VTF L
Sbjct: 211 GDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+NGYC+ + +A+ V+ +M ++G T LI LC + +V E + +++ + G
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLME-EMEDLG 329
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
L P E ++ ++KG C++G M +A M + EP + IY+ IDGY + G +E A
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAM 389
Query: 479 MLRKEMFENQV 489
+++ M + +
Sbjct: 390 AVKEAMAKKGI 400
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 165/350 (47%), Gaps = 26/350 (7%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+ F+ +I + + K D+ + + + GL+ V+T N+LI + G + Y +
Sbjct: 192 YTFNTVISGLCRIGQLRKAG---DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248
Query: 219 ---YREVFGLDSDATA--------GIGKDVKRVVRVR-----------PNVHTFNALMVG 256
+E+ TA G K+ VR +V T+N+L+ G
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
EG E+ + EM LG P+ ++ ++ FC++ M +A + M ++NVE D
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
VV Y +I G+ +G+M A M G+ + T+ L+ G+ R+GD SA + +
Sbjct: 369 VVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
+M KG E + T VLIG LC K V +A+ +L + + GL P +Y +I+G C++
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLD-EMSEVGLEPNHLTYNTIIQGFCDK 487
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
G ++ A +++ M ++ Y+ FI + + G ++ A L EM +
Sbjct: 488 GNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 4/254 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER---RM 298
RV P+++TFN ++ G R G K DV ++ G P +Y+ L+ +C++ M
Sbjct: 186 RVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNM 245
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+ L +EM + + V + +I G+C+ A A F EM G+ +S VT+ L
Sbjct: 246 YHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSL 305
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++G C G V+ + + +M G P T ++ C K + +A D + + +
Sbjct: 306 ISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG-MTERN 364
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ P Y LI G GKME+A+ V+ M KG P++ Y+ I G+ + G+ A+
Sbjct: 365 VEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSAS 424
Query: 479 MLRKEMFENQVRQE 492
L EM E + +
Sbjct: 425 GLLDEMKEKGIEAD 438
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 146/331 (44%), Gaps = 24/331 (7%)
Query: 145 EVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
++L+K E G +P F +LI + N V + + +G++ V T N+L
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTA---AAVRVFEEMKQQGIAASVVTYNSL 305
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
I + V G ++ E+ L + PN TF ++ GF ++G
Sbjct: 306 ISGLCSEGKVEEGVKLMEEMEDLG----------------LSPNEITFGCVLKGFCKKGM 349
Query: 263 FEKVEDVWVE-MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
D W++ M EPD Y++L+ + +M +A + E M K + +V YN
Sbjct: 350 MADAND-WIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYN 408
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
+I GF G+ A EM G+E+ VT+ L+ C G+V A+ + ++M
Sbjct: 409 CLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEV 468
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G EP T +I CDK + A +I + R+ K +Y IK C+ GKM+E
Sbjct: 469 GLEPNHLTYNTIIQGFCDKGNIKSAYEI-RTRMEKCRKRANVVTYNVFIKYFCQIGKMDE 527
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
A + EM+ K P+ Y +G M++G
Sbjct: 528 ANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ + PN +FN ++ + ++ +V+ M C PD Y+Y LM C+E R+ E
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L +EM+ + V YN +I G C+ G++ R + M L G + VT+ L++
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C G +D A+ + M P T LI L +RR +A+ +L + + + G
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSS-MEERGYH 359
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+ Y LI GL +EGK EEA+ + +M KG +P++ +YS +DG +EG A +
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI 419
Query: 481 RKEMF 485
M
Sbjct: 420 LNRMI 424
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 113/224 (50%), Gaps = 27/224 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +T+++LM GF++ G E+ VW EM + GC + + YSVL+ C R++EA +
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 489
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS----VTFEHLVN 360
W +M ++ D VAY++II G C IG M A + + EM L E S VT+ L++
Sbjct: 490 WSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM-LCQEEPKSQPDVVTYNILLD 548
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL------CDK-------------- 400
G C D+ A+ + N M +G +P+ T + L CDK
Sbjct: 549 GLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLK 608
Query: 401 -RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
+RV A I++ + K+ L P ++ +++ +C+ K+ A+
Sbjct: 609 RQRVSGACTIVEVMLGKY-LAPKTSTWAMIVREICKPKKINAAI 651
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 121/245 (49%), Gaps = 4/245 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+ L+ G ++ + M G + + YSVL++ +E + EA L
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W +M +K + ++V Y+ ++ G C G+ A+E M SG ++ T+ L+ G+ +
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A+ V+ +M + G VLI LC RV EA+ ++ ++++ G+ P
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM-MVWSKMLTIGIKPDTV 503
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGK---GFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y +IKGLC G M+ ALK+ EM+ + +P + Y+ +DG + ++ A L
Sbjct: 504 AYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLL 563
Query: 482 KEMFE 486
M +
Sbjct: 564 NSMLD 568
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 112/230 (48%), Gaps = 2/230 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N H ++ L+ G ++EG E+ +W +MA GC+P+ YSVL+ C E + EA+++
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M + Y++++ GF + G A + ++EM +G + + L++G C
Sbjct: 421 NRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGV 480
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK--FGLFPTE 423
G V A++V++ M G +P+ +I LC + AL + + + P
Sbjct: 481 GRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDV 540
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+Y L+ GLC + + A+ + M+ +G +P + + F++ ++ N
Sbjct: 541 VTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 5/249 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEK----VEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
R + +V +FN+++ EG + + + V + P+ S+++++ C+ R
Sbjct: 143 RCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRF 202
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A +++ M ++ D Y T++ G C+ + A EM G S V +
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++G C+ GD+ + ++M KG P T LI LC K ++ +A+ +L+ R+V
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLE-RMVSS 321
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P + +Y LI GL ++ + +A+++ + M +G+ + IYS I G KEG E A
Sbjct: 322 KCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEA 381
Query: 478 TMLRKEMFE 486
L ++M E
Sbjct: 382 MSLWRKMAE 390
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N L+ G +G +K + M C P+ +Y L+ ++RR +A +L
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M ++ + Y+ +I G + G+ A +R+M G + + V + LV+G CR
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A + N M G P T L+ EA+ + K + K G +
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWK-EMDKTGCSRNKF 468
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI GLC G+++EA+ V ++M+ G +P YS+ I G G+++ A L EM
Sbjct: 469 CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Query: 485 F 485
Sbjct: 529 L 529
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 1/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +N L+ G ++G +V + M GC P+ +Y+ L+ C + ++ +A L
Sbjct: 255 PSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSL 314
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M + V Y T+I G + A M G + + L++G +
Sbjct: 315 LERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFK 374
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A+ ++ M KG +P VL+ LC + + EA +IL R++ G P
Sbjct: 375 EGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN-RMIASGCLPNAY 433
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L+KG + G EEA++V EM G + YS IDG G V+ A M+ +M
Sbjct: 434 TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM 493
Query: 485 FENQVRQE 492
++ +
Sbjct: 494 LTIGIKPD 501
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 93/172 (54%), Gaps = 3/172 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN+ ++ L+ G REG + +++ M GC P+ Y+YS LM F + EA +
Sbjct: 394 KPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQ 453
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+W+EM + Y+ +I G C +G + A + +M G++ +V + ++ G C
Sbjct: 454 VWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513
Query: 364 RAGDVDSAILVYNDM-CRK--GFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
G +D+A+ +Y++M C++ +P+ T +L+ LC ++ + A+D+L +
Sbjct: 514 GIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNS 565
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 128/248 (51%), Gaps = 1/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+ ++ G +EG +DV M R G + + Y+ L+ + A L
Sbjct: 372 PNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDL 431
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM++K +E DV Y T+I G C++ ++ A+ +M G+ ++V + +++ + +
Sbjct: 432 LNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFK 491
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG A+ + + + G +P T LI LC ++EA+ ++ + GL P +
Sbjct: 492 AGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFD-KMRELGLDPNVQ 550
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G C+ G + +A+ + EMV KG +Y++ IDG+MK+G+++ A L+ +M
Sbjct: 551 VYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKM 610
Query: 485 FENQVRQE 492
E ++ +
Sbjct: 611 IETGLQLD 618
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 128/246 (52%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N+L+ G+ + G E+VE + EM + GC D +Y+ L+ F + + +A
Sbjct: 232 PDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSY 291
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM+ V +VV +T + FC+ G + A + F +M + G+ + T+ LV+G C+
Sbjct: 292 FGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCK 351
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG +D AI++ ++M +G P T V++ LC + +V A D+L + + + G+ E
Sbjct: 352 AGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVL-SLMERAGVKANEL 410
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G E AL + EM KG E + +Y I G K ++ A L +M
Sbjct: 411 LYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKM 470
Query: 485 FENQVR 490
+ +R
Sbjct: 471 DDCGLR 476
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 37/300 (12%)
Query: 222 VFGLDSDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
V GL + + DV ++ V+ N + L+ G + E+ D+ EM G
Sbjct: 381 VDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGM 440
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
E D Y L+ C+ +++ EA+ L +M D + + V Y TI+ F + G+ + A
Sbjct: 441 ELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVA 500
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
++ SG++ + VT+ L++G C+AG + AI ++ M G +P LI C
Sbjct: 501 LLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFC 560
Query: 399 DKRRVFEALDI----------------------------------LKARVVKFGLFPTEK 424
+ +A+ + LKA++++ GL
Sbjct: 561 KIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLY 620
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y I G C M+EA V +EM+G G P Y+ I Y K GN+E A+ L+ EM
Sbjct: 621 CYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 128/250 (51%), Gaps = 6/250 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +++ L+ G G E+ + +M GC+P +Y+VL+ C+ + +A L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++EM + + +V Y +I G C G++ A R+M G+ S +T+ L+NGYC+
Sbjct: 324 FDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCK 383
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G V A + M ++ +P T L+ LC + ++A+ +LK R++ GL P
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK-RMLDNGLSPDIV 442
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT-----M 479
SY LI GLC EG M A K+ M EP ++A I+ + K+G ++A+ M
Sbjct: 443 SYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLM 502
Query: 480 LRKEMFENQV 489
LRK + ++V
Sbjct: 503 LRKGISLDEV 512
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 167/389 (42%), Gaps = 42/389 (10%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN--DPKLKLFE 145
AL+ F + C + SY+ +IH L +G + + + E P + +
Sbjct: 249 ALKVFDLMSREGTCAPNSVSYSILIHGLCE---VGRLEEAFGLKDQMGEKGCQPSTRTYT 305
Query: 146 VLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWE 205
VL+K + G F+L + +++RG V T LI
Sbjct: 306 VLIKALCDRGLIDKAFNLFDE--------------------MIARGCKPNVHTYTVLIDG 345
Query: 206 VSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEK 265
+ R + + R++ KD + P+V T+NAL+ G+ ++G
Sbjct: 346 LCRDGKIEEANGVCRKMV-----------KD-----GIFPSVITYNALINGYCKDGRVVP 389
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
++ M + C+P+ +++ LM C + +A L + M D + D+V+YN +I
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
G C G M A + M +E +TF ++N +C+ G D A M RKG
Sbjct: 450 GLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+ T LI +C+ + +AL IL+ +VK + T S ++ L + K++E L +
Sbjct: 510 DEVTGTTLIDGVCNVGKTRDALFILET-LVKMRMLTTPHSLNVILDMLSKGCKLKEELAM 568
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
++ G PS+ Y+ +DG ++ G++
Sbjct: 569 LGKINKLGLVPSVVTYTTLVDGLIRSGDI 597
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 206/466 (44%), Gaps = 55/466 (11%)
Query: 24 SQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKN 83
+ F + SS P S + A V+ L + + + L SL S ++P SQ+ ++
Sbjct: 23 NAFFSVSSRPSQFSSDQVAAHNVASLLKSPNWEKNSSLKSLV-SHMSPNVASQVISLQRS 81
Query: 84 NPHLALRFFSFT-QHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLK 142
+ + +RFF + +H S C + I+S + RVA
Sbjct: 82 DNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSG--------LFRVA----------- 122
Query: 143 LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
+V+V REC K + K+ +C D +R + G + ++L
Sbjct: 123 -HDVIVALIRECSRCE-------------KEMLKLISCFDELREV--SGFRLNYPCYSSL 166
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
+ +++ Y YR +++D D + +V NAL Y E A
Sbjct: 167 LMSLAKLDLGFLAYVTYRR---MEADGFVVGMIDYRTIV---------NALCKNGYTEAA 214
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM-RDKNVEHDVVAYN 321
E ++ ++G D + + L+ FC +R+A K+++ M R+ + V+Y+
Sbjct: 215 ----EMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYS 270
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
+I G CE+G + A +MG G + S+ T+ L+ C G +D A ++++M +
Sbjct: 271 ILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIAR 330
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G +P T VLI LC ++ EA + + ++VK G+FP+ +Y LI G C++G++
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCR-KMVKDGIFPSVITYNALINGYCKDGRVVP 389
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
A ++ M + +P++ ++ ++G + G A L K M +N
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 1/234 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ T+ L+ G +K +++ EM GC+P+ ++Y+VL+ C + ++ EA
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANG 357
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ +M + V+ YN +I G+C+ G + A E M + + TF L+ G C
Sbjct: 358 VCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G A+ + M G P+ + VLI LC + + A +L + + F L P
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTS-MNSFDLEPDC 476
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
++ +I C++GK + A M+ KG + IDG G A
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDA 530
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 122/257 (47%), Gaps = 10/257 (3%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ L+ G R G + M GC P+ Y Y++++ C+ R+ EAEKL
Sbjct: 579 PSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKL 638
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC- 363
M+D V + V Y ++ G+ G++ RA E R M G E + + L+ G+
Sbjct: 639 LSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVL 698
Query: 364 -----RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
R D + + + + + G G I L+ LC + R E+ +++ ++K G
Sbjct: 699 SQKGIRETDPECIKELISVVEQLGGSTSGLCI-FLVTRLCKEGRTDESNGLVQT-ILKSG 756
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+F EK+ +++ C + K + +++ ++ GF PS + + I G KEG+ E A
Sbjct: 757 VF-LEKAIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERAR 815
Query: 479 MLRKEMF-ENQVRQEDG 494
L E+ N V ++ G
Sbjct: 816 ELVMELLTSNGVVEKSG 832
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
++ Y TI+ C+ G AE F ++ G S L+ G+CR ++ A+ V++
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFD 254
Query: 377 DMCRKGF-EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
M R+G P + +LI LC+ R+ EA LK ++ + G P+ ++Y LIK LC+
Sbjct: 255 LMSREGTCAPNSVSYSILIHGLCEVGRLEEAFG-LKDQMGEKGCQPSTRTYTVLIKALCD 313
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G +++A + EM+ +G +P++ Y+ IDG ++G +E A + ++M ++ +
Sbjct: 314 RGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGI 367
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 83/419 (19%), Positives = 148/419 (35%), Gaps = 103/419 (24%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
CK ++ +Y +I L R I A V R ++ P + + L+ Y + G
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIF-PSVITYNALINGYCKDGRVVPA 390
Query: 161 FDLLI-----KCCLEVKN----------IEKIETCVDIVRMLMSRGLSVKVSTCNALIWE 205
F+LL C V+ + K V +++ ++ GLS + + N LI
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 206 VSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEK 265
+ R + Y++ + D + P+ TF A++ F ++G +
Sbjct: 451 LCREGHMNVAYKLLTSMNSFD----------------LEPDCLTFTAIINAFCKQGKADV 494
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE---EMRDKNVEHD------ 316
M R G D + + L+ C + R+A + E +MR H
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILD 554
Query: 317 --------------------------VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
VV Y T++ G G+++ + M LSG
Sbjct: 555 MLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLP 614
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ + ++NG C+ G V+ A + + M G P T
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT--------------------- 653
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
Y ++KG GK++ AL+ MV +G+E + IYS+ + G++
Sbjct: 654 ---------------YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFV 697
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 121/499 (24%), Positives = 226/499 (45%), Gaps = 71/499 (14%)
Query: 39 HNLIATVVSLLTHHRSKSRWNH-----LLSLCRSGLTPTQFSQIALGLKNNPHLALRFFS 93
H+L+ L+ + S WN L L RS L P Q + L ++ + ALRFF
Sbjct: 180 HSLVRDTCKLI---QLSSSWNRKFEGELRYLVRS-LNPLQVCAVLLSQEDERN-ALRFFY 234
Query: 94 FTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRS-----PENDPKLKLFEVLV 148
+ +H S Y ++ ILS+ +L A+ ++R+ R PE F ++
Sbjct: 235 WADRLWRYRHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPE------AFGFVM 288
Query: 149 KTYRECG---SAPFVFDLLIKCCLEVKNIEKIETCVDIVRM-------------LMSRGL 192
+Y G A V L+ K +E N+ T + I+ M ++ G+
Sbjct: 289 VSYSRAGRLRDAMKVLTLMQKAGVE-PNLSICNTAIHILVMGNELKKALRFAERMVLIGI 347
Query: 193 SVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV-------------KR 239
+ V T N LI KG + +++ + + +D + G D KR
Sbjct: 348 APNVVTYNCLI------KGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKR 401
Query: 240 VVRVR-------------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
+ +R P+ T+N+L+ + G ++ ++ E +L + D YS
Sbjct: 402 LNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYS 461
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ +C+E ++++A++L EM K + DVV Y +++ GFC IG++ +A++ ++M
Sbjct: 462 AIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKH 521
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
+ ++VT+ +NG CR G A + N + + P T V++ L + ++ EA
Sbjct: 522 HCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEA 581
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
D+++ + K G FP L+ LC +GK EA ++ E + KG ++ ++ I
Sbjct: 582 CDVVREMIGK-GFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIH 640
Query: 467 GYMKEGNVEMATMLRKEMF 485
G+ ++ ++E A L +M+
Sbjct: 641 GFCQKDDLEAALSLLDDMY 659
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 111/242 (45%), Gaps = 35/242 (14%)
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
++ +M + R+R+A K+ M+ VE ++ NT I E+ +A F M
Sbjct: 283 AFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERM 342
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
L G+ + VT+ L+ GYC VD A+ + + M KG P+ + ++G LC +R+
Sbjct: 343 VLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRL 402
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGL------------------------------ 433
E +++K L P +Y LI+ L
Sbjct: 403 NEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSA 462
Query: 434 -----CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
C+EGK+++A ++ +EM KG +P + Y++ +DG+ + G ++ A + ++M+++
Sbjct: 463 IVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHH 522
Query: 489 VR 490
+
Sbjct: 523 CK 524
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 108/228 (47%), Gaps = 3/228 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T++ ++ G REG + DV EM G P+ ++L+ C + + REA +L
Sbjct: 560 PNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQL 619
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E +K +VV + T+I GFC+ ++ A +M L +VT+ L++ +
Sbjct: 620 LKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAK 679
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
++ A + M R+G P T +I + C K RV E L L +++ F T
Sbjct: 680 TDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRV-EDLLKLLKKMLLKSRFQT-- 736
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+Y +I+ LC+ G +EEA + E++ + ++ Y+ G
Sbjct: 737 AYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVG 784
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 164/350 (46%), Gaps = 37/350 (10%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
F + ++++ + ++K + +++ L G+ + V T + +I + V EI
Sbjct: 74 FTYSIVLRGLCKAGELDKAK---ELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEI 130
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
++ + +AG G P+V TFN+L+ G + ++ MA+ GC
Sbjct: 131 FKTM-------SAGGG--------CVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGC 175
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
EP+ SYS L+ C+ R+ EA +LWEEM +K+ D+VAY + + G C+ +A A +
Sbjct: 176 EPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACD 235
Query: 339 FFREMGLSGVESSSVTF-----------------EHLVNGYCRAGDVDSAILVYNDMCRK 381
R+M G ++ +V F ++ CR+G +D A + +M +
Sbjct: 236 CCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISR 295
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILK--ARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
P LI +C +R+ + + + + + +F P ++Y ++ LC+ ++
Sbjct: 296 NHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQL 355
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+EA ++ EM G P + YSA +DG K G ++ A L +EM + V
Sbjct: 356 DEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGV 405
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 1/210 (0%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M C P+ +Y++++ C+ +++ EA++L EM + + DVV Y+ ++ G C++G+
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ RA + EM GV S T ++N +AG VD A+ M +G P+ T
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
L+ LC R+ EA+ L A++V P SY +I LC G+ A + EMV +
Sbjct: 450 LLDGLCKAGRIDEAITFL-AKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKR 508
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
G P +Y + +DG + G ++A L K
Sbjct: 509 GVLPDTVLYHSLLDGLARNGLEDLALELLK 538
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 118/246 (47%), Gaps = 5/246 (2%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V T+N + + A + + + +M R G PD ++YS+++ C+ + +A++L
Sbjct: 37 SVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELL 96
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL-SGVESSSVTFEHLVNGYCR 364
++R+ V+ +V+ Y+ +I G C+ + A E F+ M G VTF L+ G C
Sbjct: 97 GQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCS 156
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ A +++ M + G EP + L+ LC R+ EA + + V K P
Sbjct: 157 GERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEK-SCVPDLV 215
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y + GLC+ ++ EA +MV KG + +S I K+G+ E A + +M
Sbjct: 216 AYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEA---QNQM 272
Query: 485 FENQVR 490
E+ R
Sbjct: 273 IEHLCR 278
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 114/250 (45%), Gaps = 4/250 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V T++AL+ G + G ++ D+ EM++ G PD ++ + ++ + ++ A
Sbjct: 370 LSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYAL 429
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
E M+ + D+V YNT++ G C+ G + A F +M + ++ ++
Sbjct: 430 SHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITAL 489
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR+G A ++ +M ++G P+ L+ L AL++LK + K P
Sbjct: 490 CRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCK----PD 545
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ ++ GLC+ GK E+A +V M GF Y + G K G V+ A L
Sbjct: 546 FVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVD 605
Query: 483 EMFENQVRQE 492
+ E E
Sbjct: 606 DASETHTSVE 615
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 82/178 (46%)
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
R K +H V YN + + A E F++M G T+ ++ G C+AG++
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D A + + G + T V+I C RV +AL+I K G P ++
Sbjct: 90 DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNS 149
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
L+KGLC +M EA + M G EP++ YS +DG K G ++ A L +EM E
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVE 207
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 139/252 (55%), Gaps = 6/252 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P++ T+NA++ G ++G + + + + +EM +G PD +Y+ L+ C EA+
Sbjct: 32 LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAK 91
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ EM + V D+V++++++ F + +A +FR+M G+ +V + L++GY
Sbjct: 92 EIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGY 151
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G++ A+ + ++M +G + ++ LC ++ + +A D L +V+ G P
Sbjct: 152 CRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDA-DKLFDEMVERGALPD 210
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT---- 478
++ LI G C++G M +AL + M + +P + Y+ IDG+ K G +E A+
Sbjct: 211 FYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWD 270
Query: 479 -MLRKEMFENQV 489
M+ +++F N +
Sbjct: 271 GMISRKIFPNHI 282
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 17/291 (5%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
+++ GLS +T N L+ E R EI+ E+ V P+
Sbjct: 62 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQG----------------VVPD 105
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ +F++LM F R ++ + +M + G PD Y+VLM +C M EA K+ +
Sbjct: 106 LVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRD 165
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
EM ++ DV+AYNTI+ G C+ + A++ F EM G TF L++G+C+ G
Sbjct: 166 EMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDG 225
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++ A+ ++ M ++ +P+ LI C + +A ++ + + +FP +Y
Sbjct: 226 NMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISR-KIFPNHITY 284
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
LI C G + EA ++ M+ KG +P+L + I GY + G+ A
Sbjct: 285 GILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKA 335
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 121/244 (49%), Gaps = 1/244 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N L+ + REG E+ ++ MA G +P ++Y+ ++ C++ R A+ + EM
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + D YNT++ C + A+E F EM GV V+F L+ + R +
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D A++ + DM + G P+ VL+ C + EAL I + +++ G +Y
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKI-RDEMLEQGCVLDVIAYNT 181
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
++ GLC+E + +A K+ EMV +G P ++ I G+ ++GN+ A L M +
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241
Query: 489 VRQE 492
++ +
Sbjct: 242 IKPD 245
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 120/250 (48%), Gaps = 1/250 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ + P+ T+N L+V R F + ++++ EM R G PD S+S LMAVF R + +
Sbjct: 65 IGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQ 124
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A + +M+ + D V Y ++ G+C G M A + EM G + + ++N
Sbjct: 125 ALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILN 184
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ + A ++++M +G P+ T LI C + +AL + + + +
Sbjct: 185 GLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF-GTMTQRNIK 243
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y LI G C+ G+ME+A ++ M+ + P+ Y I+ Y G+V A L
Sbjct: 244 PDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRL 303
Query: 481 RKEMFENQVR 490
M E ++
Sbjct: 304 WDVMIEKGIK 313
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 97/186 (52%), Gaps = 1/186 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V +N ++ G +E + ++ EM G PD Y+++ L+ C++ M +A L+
Sbjct: 175 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 234
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M +N++ D+VAYNT+I GFC++GEM +A E + M + + +T+ L+N YC
Sbjct: 235 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 294
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G V A +++ M KG +P T +I C +A + L R++ G+ P S
Sbjct: 295 GHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFL-GRMIAKGVAPDHIS 353
Query: 426 YMFLIK 431
Y LI
Sbjct: 354 YNTLIN 359
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 34/204 (16%)
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
+V YNT+IG +C G + A E M G++ S T+ ++NG C+ G A +
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI----LKARVV----------------- 415
+M G P+ +T L+ E C + EA +I L+ VV
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120
Query: 416 -------------KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
KFGL P Y L+ G C G M EALK++ EM+ +G + Y+
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180
Query: 463 AFIDGYMKEGNVEMATMLRKEMFE 486
++G KE + A L EM E
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVE 204
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 66/119 (55%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++P++ +N L+ GF + G EK ++W M P+ +Y +L+ +C + EA
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+LW+ M +K ++ +V NT+I G+C G+ ++A+EF M GV +++ L+N
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 128/253 (50%), Gaps = 1/253 (0%)
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
G+ + ++ R PN T+N L+ G+ + E +++ +M + G P+ + + L+
Sbjct: 401 GLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDG 460
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+ R+ A + + EM+ K ++ + V Y +I FC + + +A E F EM +G
Sbjct: 461 MCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPD 520
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
++ + L++G +AG +D A V + M GF P+ + VLI C K ++ EA ++LK
Sbjct: 521 AIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLK 580
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ G+ P +Y LI + G A ++ +MV +G P++ Y A I Y
Sbjct: 581 -EMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLN 639
Query: 472 GNVEMATMLRKEM 484
GN++ A + ++M
Sbjct: 640 GNLDEAMKIFRDM 652
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 136/311 (43%), Gaps = 16/311 (5%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
IE ++ + G+ V T N L+ + + + E + E+ G
Sbjct: 432 IEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKG---------- 481
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
++ N T+ AL+ F EK +++ EM GC PD Y L++ +
Sbjct: 482 ------LKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAG 535
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
++ A + +M++ D+V++N +I GFC ++ A E +EM +G++ VT+
Sbjct: 536 KLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYN 595
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L++ + + GD +A + M ++G P T LI C + EA+ I +
Sbjct: 596 TLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSST 655
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
+ P Y LI LC + +++ AL + +M KG +P+ ++A G ++ +
Sbjct: 656 SKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSK 715
Query: 477 ATMLRKEMFEN 487
A L M E+
Sbjct: 716 AFELMDRMTEH 726
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 58/250 (23%)
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
NAL+ R F+++ + EM + +P+ ++ +L+ C+ RR+ EA +++E+M
Sbjct: 309 NALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNG 368
Query: 311 KN-----VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE---------SSSVTFE 356
VE DV+ YNT+I G C++G R EE GL VE ++VT+
Sbjct: 369 GESNGFLVEPDVITYNTLIDGLCKVG---RQEE-----GLGLVERMRSQPRCMPNTVTYN 420
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L++GYC+A +++A +++ M + G P T+ L+
Sbjct: 421 CLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLV---------------------- 458
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G+C+ G++ A++ EM GKG + + Y+A I + N+E
Sbjct: 459 --------------DGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEK 504
Query: 477 ATMLRKEMFE 486
A L EM E
Sbjct: 505 AMELFDEMLE 514
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 17/219 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K++ ++ + G S + + N LI R + YE+ +E+ AGI
Sbjct: 536 KLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEM------ENAGI-- 587
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+P+ T+N L+ F + G F + +M + G P +Y L+ +C
Sbjct: 588 --------KPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLN 639
Query: 296 RRMREAEKLWEEMRDKN-VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ EA K++ +M + V + V YN +I C ++ A +M + GV+ ++ T
Sbjct: 640 GNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNT 699
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
F + G + A + + M P+ T+E+L
Sbjct: 700 FNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 132/323 (40%), Gaps = 33/323 (10%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
+D+ + S + + V+ LI R + V + +Y E+ +R+
Sbjct: 144 LDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNELC------------PSRRL 191
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE--PDCYSYSVLMAVFCEERRM 298
+R N L+ +R+G + + EM + E P+ + ++ + + ++
Sbjct: 192 THIR------NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKV 245
Query: 299 REA--EKLWEEMRDKNVEHDV----VAYNTIIGGFCEIGEMARAEEFFRE-MGLSGVESS 351
A E+ + K EH+V + +I C G RA + M L GV +
Sbjct: 246 GRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEA 305
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+ + L+ RA + + +M +P T +LI LC RRV EAL++ +
Sbjct: 306 A-SCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFE 364
Query: 412 ----ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG-FEPSLEIYSAFID 466
F + P +Y LI GLC+ G+ EE L + M + P+ Y+ ID
Sbjct: 365 KMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLID 424
Query: 467 GYMKEGNVEMATMLRKEMFENQV 489
GY K +E A L +M ++ V
Sbjct: 425 GYCKASMIEAARELFDQMNKDGV 447
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 187/431 (43%), Gaps = 44/431 (10%)
Query: 66 RSGLTPTQ--FSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGP 123
+ G+ P ++ I GL +N + + + C S+ +Y ++ L ++ I
Sbjct: 195 KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISD 254
Query: 124 ARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCV 181
A ++++ E G AP V ++ LI ++ N+++ V
Sbjct: 255 A--------------------SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEA---V 291
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
+ ++ S V T N LI + + G ++ +E+ +
Sbjct: 292 VLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCE------------- 338
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
PN T+N LM + G + ++ M R C+P +++++++ +FC+ ++ A
Sbjct: 339 ---PNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLA 395
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L++ M D+ D+ YN +I G C + A + M +G VT+ +V+G
Sbjct: 396 YELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSG 455
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+A VD A VY + G+ + T LI LC RR+ +A +L+ + + G P
Sbjct: 456 LCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLR-EMERNGSAP 514
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI G C+ +++++L +EM+ KG P++ YS ID K V ML
Sbjct: 515 DVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLL 574
Query: 482 KEMFENQVRQE 492
K M E V +
Sbjct: 575 KTMLERGVTPD 585
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 124/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+++T+N ++ G R + + M GC PD +Y+ +++ C+ ++ EA ++
Sbjct: 409 PDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEV 468
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E +R+ DVV +T+I G C+ + AE+ REM +G V + L++G+C+
Sbjct: 469 YEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCK 528
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A +D ++ +++M KG P T ++I +LC RV + +LK +++ G+ P
Sbjct: 529 ADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKT-MLERGVTPDAI 587
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y +I GLC+ +EA ++ M G P++ Y+ +D K ++ A L + M
Sbjct: 588 VYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVM 647
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 151/333 (45%), Gaps = 20/333 (6%)
Query: 152 RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
R+C + F F+L+I +V +++ ++ +++ RG + T N +I R
Sbjct: 370 RDCKPSHFTFNLMIDMFCKVG---QLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANR 426
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
+ ++ L+ AG P+V T+N+++ G + ++ +V+
Sbjct: 427 IDDARQL------LERMTEAG----------CPPDVVTYNSIVSGLCKASQVDEAYEVYE 470
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
+ G D + S L+ C+ RR+ +AEKL EM DVVAY +I GFC+
Sbjct: 471 VLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKAD 530
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
++ ++ FF EM G + +T+ +++ C++ V ++ M +G P+
Sbjct: 531 QLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYT 590
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+I LC EA ++ K + + G PT +Y L+ LC+ +++EA+ + M
Sbjct: 591 SVIDGLCKSDSYDEAYELYKL-MKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMES 649
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G P Y++ DG+ K + A L + M
Sbjct: 650 DGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAM 682
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 4/243 (1%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
T N L+ F R+ ++ D++ + R G C PD +YS L+ FC+ R ++A +L +E
Sbjct: 134 TCNCLLSAFVRKKKAQEAYDLF-KNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDE 192
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M + + YNTII G C+ G + A +R+M S +T+ LV+ C++
Sbjct: 193 MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RNCAPSVITYTILVDALCKSAR 251
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+ A L+ DM G P T LI C + EA+ +L ++++ P +Y
Sbjct: 252 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV-VLFNQMLENSCSPDVFTYN 310
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
LI G C++ + ++ K+ EMV G EP+ Y+ +D +K G A L + M
Sbjct: 311 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 370
Query: 488 QVR 490
+
Sbjct: 371 DCK 373
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 2/202 (0%)
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
++ + L++ F +++ +EA L++ R D + Y+T+I GFC+ + +A E
Sbjct: 133 FTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDE 192
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G+ + + ++ G C G VDSA++ Y DM ++ P T +L+ LC R
Sbjct: 193 MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSAR 251
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ +A IL+ +++ G P +Y LI G C+ G M+EA+ + +M+ P + Y+
Sbjct: 252 ISDASLILE-DMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYN 310
Query: 463 AFIDGYMKEGNVEMATMLRKEM 484
IDGY K+ + L +EM
Sbjct: 311 ILIDGYCKQERPQDGAKLLQEM 332
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 170/397 (42%), Gaps = 42/397 (10%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C+ + +Y T++ L ++ A ++ ++ LR + P F +++ + + G
Sbjct: 337 CEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR-DCKPSHFTFNLMIDMFCKVGQLDLA 395
Query: 161 FDLLI----KCCLE---VKNIEKIETC----VDIVRMLMSR----GLSVKVSTCNALIWE 205
++L + CL NI C +D R L+ R G V T N+++
Sbjct: 396 YELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSG 455
Query: 206 VSRGKGVISGYEIYREV----FGLD----SDATAGIGK-----DVKRVVR------VRPN 246
+ + V YE+Y + + LD S G+ K D ++++R P+
Sbjct: 456 LCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPD 515
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V + L+ GF + +K + EM GC P +YS+++ C+ R+R+ L +
Sbjct: 516 VVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLK 575
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M ++ V D + Y ++I G C+ A E ++ M +G + VT+ LV+ C+
Sbjct: 576 TMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVS 635
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGEL---CDKRRVFEALDILKARVVKFGLFPTE 423
+D AI + M G P+ T + + + F +K+R G PT
Sbjct: 636 RLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSR----GCSPTP 691
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
Y L+ L E KM++A+++ E + G + EI
Sbjct: 692 FMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEI 728
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 2/174 (1%)
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
+H N ++ F + A + F+ S+T+ L+NG+C+A D A
Sbjct: 129 KHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYR 188
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ ++M ++G P + +I LCD RV AL + R ++ P+ +Y L+ L
Sbjct: 189 LLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL--VHYRDMQRNCAPSVITYTILVDAL 246
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
C+ ++ +A + +M+ G P++ Y+ I+G+ K GN++ A +L +M EN
Sbjct: 247 CKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLEN 300
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 131/262 (50%), Gaps = 3/262 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
+ A G+ + ++R V P V T+ A++ G R G E V EM G P+ + +S
Sbjct: 399 AKAAMGVMRRMERA-EVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFS 457
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ FC+ + A ++W+ M ++ +VV Y+ +I G G+M AE FREM +
Sbjct: 458 PVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEA 517
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
+ +T+ +V GY + GD A+ + DM R G P T VLI LC+ R +A
Sbjct: 518 KCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDA 577
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG-FEPSLEIYSAFI 465
+ + K ++ G P +Y +IKG C G ++ L++ +M+ +G P + Y+ +
Sbjct: 578 MMVWK-HMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLL 636
Query: 466 DGYMKEGNVEMATMLRKEMFEN 487
DG ++ ++ A L +M +
Sbjct: 637 DGLLRAKDLPRAMDLLNQMLDQ 658
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 168/395 (42%), Gaps = 72/395 (18%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
A + FSF Q K C S ++Y ++H L L G A+ + V R ++ EV+
Sbjct: 367 AAKLFSFMQLKG-CAPSAATYNVLLHGL---LLCGRAKAAMGVMRR-------MERAEVV 415
Query: 148 --VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGL--------SVKVS 197
V TY V D L++C ++E ++ + S+GL V
Sbjct: 416 PGVMTYGA------VVDGLVRC-------GRLEDACKVIEEMRSKGLVPNEFVFSPVITG 462
Query: 198 TCN-------ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVR------ 244
C + +W+ G+ +Y + D A GK + + R
Sbjct: 463 FCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMI----DGLARCGKMTEAELLFREMIEAK 518
Query: 245 --PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN+ T+++++ G+++ G + W +M R+GC P+ +YSVL+ C R ++A
Sbjct: 519 CVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAM 578
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG-VESSSVTFEHLVNG 361
+W+ M + D +AY ++I GFC G + F +M G + + L++G
Sbjct: 579 MVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDG 638
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGST-----------------IEVLIGELCDKRRVF 404
RA D+ A+ + N M + +P+ T +E L+ LC+++R
Sbjct: 639 LLRAKDLPRAMDLLNQMLDQACDPDTVTCNTFLREIEVGQKGQEFLEGLVVRLCNRKRNK 698
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
A ++L + K+ + P +++G+C ++
Sbjct: 699 AAGEVLMVMLAKY-IVPEAAVLEMVVRGVCRRKRV 732
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 125/264 (47%), Gaps = 18/264 (6%)
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA---------RLGCEPDCYSYSV 287
++R R+ P + +FN L++ + +++E+A PD ++YS
Sbjct: 261 LRRFTRLAPTLLSFN-LLLKCVCSSLVPRNHQLYLELALRVVHRSIPAWKLVPDKFTYST 319
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVA---YNTIIGGFCEIGEMARAEEFFREMG 344
+++ + R+ +A L EM V VVA +N ++G G++ A + F M
Sbjct: 320 VVSALADAGRVDDAVALVHEM----VVDGVVAAEAFNPVLGAMLRTGDVTGAAKLFSFMQ 375
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
L G S+ T+ L++G G +A+ V M R P T ++ L R+
Sbjct: 376 LKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLE 435
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+A +++ K GL P E + +I G C+ G+++ A +V MV G +P++ +YSA
Sbjct: 436 DACKVIEEMRSK-GLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAM 494
Query: 465 IDGYMKEGNVEMATMLRKEMFENQ 488
IDG + G + A +L +EM E +
Sbjct: 495 IDGLARCGKMTEAELLFREMIEAK 518
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 108/279 (38%), Gaps = 34/279 (12%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
FN ++ R G ++ M GC P +Y+VL+ R + A + M
Sbjct: 350 AFNPVLGAMLRTGDVTGAAKLFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRM 409
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
V V+ Y ++ G G + A + EM G+ + F ++ G+C+ G+V
Sbjct: 410 ERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEV 469
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGEL--CDKRRVFEAL--DILKARVV--------- 415
D A V++ M G +P +I L C K E L ++++A+ V
Sbjct: 470 DRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSM 529
Query: 416 ---------------------KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+ G P +Y LI GLC G+ ++A+ V M+G+G
Sbjct: 530 VRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGC 589
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
P Y++ I G+ G V+ L +M D
Sbjct: 590 VPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPD 628
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 129/251 (51%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V TFN L+ + G EK V +M + G + D S+ ++ FC+ ++ EA
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 494
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ ++M K+V + YN+II + E G+ +A +M SGV +S VT+ L+ G
Sbjct: 495 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGL 554
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR+ +D A + + +G P+ + +I C+K +AL++L+ + K+G+ PT
Sbjct: 555 CRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQ-EMNKYGIRPT 613
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ L+ L G++ + + +M+ K EPS IY +D Y++ N L+K
Sbjct: 614 LRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKK 673
Query: 483 EMFENQVRQED 493
EM E + +D
Sbjct: 674 EMSEKGIAFDD 684
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 121/243 (49%), Gaps = 36/243 (14%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+T + L+ G ++G K + V+ + G P Y+ L+ +C+ R +R A ++E
Sbjct: 334 AYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFE 393
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+M+ +++ D + YN +I G C++ + +AE+ EM SGV+ S TF L++ Y AG
Sbjct: 394 QMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAG 453
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
++ V +DM +KG +K+ V+ FG
Sbjct: 454 QLEKCFTVLSDMQQKG---------------------------IKSDVISFG-------- 478
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
++K C+ GK+ EA+ + +M+ K P+ ++Y++ ID Y++ G+ E A +L ++M
Sbjct: 479 -SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKN 537
Query: 487 NQV 489
+ V
Sbjct: 538 SGV 540
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 119/271 (43%), Gaps = 13/271 (4%)
Query: 231 AGIGKDVKRV------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+G G D +V + V PN T+N ++ G + G E + +M G +P+ +
Sbjct: 207 SGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVT 266
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+VL++ C RM E L +EM ++ D Y+ + G GE F E
Sbjct: 267 YNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESL 326
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKR 401
GV + T L+NG C+ G V A V+ + G P LI C D R
Sbjct: 327 KKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLR 386
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
F + +K+R ++ P +Y LI GLC+ + +A + EM G +PS+E +
Sbjct: 387 GAFCIFEQMKSRHIR----PDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF 442
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ ID Y G +E + +M + ++ +
Sbjct: 443 NTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 473
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 108/245 (44%), Gaps = 1/245 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ ++N ++ G +R G V+ EM +G P+ +Y+ ++ + + +L
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRL 251
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M + +VV YN ++ G C G M EM + T+ L +G R
Sbjct: 252 RDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTR 311
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ + + ++ + +KG T +L+ LC +V +A + + +V GL PT
Sbjct: 312 TGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEM-LVHTGLVPTTV 370
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G C+ + A + +M + P Y+A I+G K V A L EM
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 430
Query: 485 FENQV 489
++ V
Sbjct: 431 EKSGV 435
>gi|242035667|ref|XP_002465228.1| hypothetical protein SORBIDRAFT_01g034600 [Sorghum bicolor]
gi|241919082|gb|EER92226.1| hypothetical protein SORBIDRAFT_01g034600 [Sorghum bicolor]
Length = 557
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 135/267 (50%), Gaps = 8/267 (2%)
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVG-FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
G+ +D R R P A ++G F +G F KV D M GC PD Y ++
Sbjct: 199 GLLRDAAR--RGSPLPADAAADLIGAFAADGNFGKVSDTLHLMISTGCTPDKVIYQRVIH 256
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
R EA +++ E++ + + D + Y+T+I G CE+ + A++ + EM G++
Sbjct: 257 GLFRRRMGGEALRVFREIKQRGYQIDRIIYSTVIHGLCEMRLIGDAQQMWDEMVDRGIQP 316
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ + LV+ YCR GD++ A VY++M KGF+ + +LI C RV++AL++
Sbjct: 317 NEYAYCSLVSYYCRVGDLEKARKVYDEMLAKGFKQTTVSCNILIKGFCVHGRVYDALEVF 376
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ VK G+ +Y LI+GLC+ GK++ A+++ + G EP++ +S I +
Sbjct: 377 EEMSVK-GIKHDVITYDTLIRGLCKVGKLDSAIQMYEWFLSSGLEPTVSTFSPLIGAMCE 435
Query: 471 EGNVEMA----TMLRKEMFENQVRQED 493
G V A ++R + E V D
Sbjct: 436 NGQVHAAVDLINLMRAKGLEPLVWSND 462
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 114/220 (51%), Gaps = 1/220 (0%)
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ +W EM G +P+ Y+Y L++ +C + +A K+++EM K + V+ N +I G
Sbjct: 303 QQMWDEMVDRGIQPNEYAYCSLVSYYCRVGDLEKARKVYDEMLAKGFKQTTVSCNILIKG 362
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
FC G + A E F EM + G++ +T++ L+ G C+ G +DSAI +Y G EP
Sbjct: 363 FCVHGRVYDALEVFEEMSVKGIKHDVITYDTLIRGLCKVGKLDSAIQMYEWFLSSGLEPT 422
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
ST LIG +C+ +V A+D++ K GL P S +I G C+ + +E +
Sbjct: 423 VSTFSPLIGAMCENGQVHAAVDLINLMRAK-GLEPLVWSNDRIINGFCKINRSDEGMAWL 481
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
A M+ +P + + ++ G ++ A ++ MF+
Sbjct: 482 AGMLKDNIKPRKQTFDYLVESLSTCGRLDDALLVLNIMFK 521
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 128/246 (52%), Gaps = 2/246 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN + + +L+ + R G EK V+ EM G + S ++L+ FC R+ +A
Sbjct: 314 IQPNEYAYCSLVSYYCRVGDLEKARKVYDEMLAKGFKQTTVSCNILIKGFCVHGRVYDAL 373
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++EEM K ++HDV+ Y+T+I G C++G++ A + + SG+E + TF L+
Sbjct: 374 EVFEEMSVKGIKHDVITYDTLIRGLCKVGKLDSAIQMYEWFLSSGLEPTVSTFSPLIGAM 433
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G V +A+ + N M KG EP + + +I C R E + L A ++K + P
Sbjct: 434 CENGQVHAAVDLINLMRAKGLEPLVWSNDRIINGFCKINRSDEGMAWL-AGMLKDNIKPR 492
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++++ +L++ L G++++AL V M GF + +D + GNV + L
Sbjct: 493 KQTFDYLVESLSTCGRLDDALLVLNIMFKVGFGLGRFACTILVDK-LCTGNVSYSHQLDN 551
Query: 483 EMFENQ 488
+ +Q
Sbjct: 552 ILVSSQ 557
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 132/256 (51%), Gaps = 12/256 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + ++ G +R + V+ E+ + G + D YS ++ CE R + +A+++
Sbjct: 246 PDKVIYQRVIHGLFRRRMGGEALRVFREIKQRGYQIDRIIYSTVIHGLCEMRLIGDAQQM 305
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W+EM D+ ++ + AY +++ +C +G++ +A + + EM G + ++V+ L+ G+C
Sbjct: 306 WDEMVDRGIQPNEYAYCSLVSYYCRVGDLEKARKVYDEMLAKGFKQTTVSCNILIKGFCV 365
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G V A+ V+ +M KG + + T + LI LC ++ A+ + + + GL PT
Sbjct: 366 HGRVYDALEVFEEMSVKGIKHDVITYDTLIRGLCKVGKLDSAIQMYEW-FLSSGLEPTVS 424
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK-----EGNVEMATM 479
++ LI +CE G++ A+ + M KG EP + I+G+ K EG +A M
Sbjct: 425 TFSPLIGAMCENGQVHAAVDLINLMRAKGLEPLVWSNDRIINGFCKINRSDEGMAWLAGM 484
Query: 480 L------RKEMFENQV 489
L RK+ F+ V
Sbjct: 485 LKDNIKPRKQTFDYLV 500
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 119/291 (40%), Gaps = 37/291 (12%)
Query: 108 YATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKC 167
Y+T+IH L RLIG A+ ++++ +V R + + L+
Sbjct: 286 YSTVIHGLCEMRLIGDAQ----------------QMWDEMVD--RGIQPNEYAYCSLVSY 327
Query: 168 CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDS 227
V ++EK D ++++G +CN LI V E++ E+
Sbjct: 328 YCRVGDLEKARKVYD---EMLAKGFKQTTVSCNILIKGFCVHGRVYDALEVFEEM----- 379
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
+ GI DV T++ L+ G + G + ++ G EP ++S
Sbjct: 380 -SVKGIKHDVI----------TYDTLIRGLCKVGKLDSAIQMYEWFLSSGLEPTVSTFSP 428
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ CE ++ A L MR K +E V + + II GFC+I + M
Sbjct: 429 LIGAMCENGQVHAAVDLINLMRAKGLEPLVWSNDRIINGFCKINRSDEGMAWLAGMLKDN 488
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
++ TF++LV G +D A+LV N M + GF +L+ +LC
Sbjct: 489 IKPRKQTFDYLVESLSTCGRLDDALLVLNIMFKVGFGLGRFACTILVDKLC 539
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 202/468 (43%), Gaps = 45/468 (9%)
Query: 28 TSSSTPPSDQSHNLIAT----VVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKN 83
+ T +D +++ IA + LL H S S LL+ ++PT ++ L N
Sbjct: 65 NQACTETTDATNHHIAQDTGKLCKLLCTH-SNSSIESLLNGASVDVSPTLVLEVLKKLSN 123
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL 143
+ +AL FF + + + K+S +Y +I L + + + K+
Sbjct: 124 SGVIALSFFRWAEKQKGFKYSTENYNALIEALGKIK--------------------QFKM 163
Query: 144 FEVLVKTYRECG-SAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
LV R G F L+ + K++ V+ + GL +S N L
Sbjct: 164 IWNLVNDMRSKGLLTQETFALISR---RYARARKVKEAVETFEKMEKFGLQPVLSDFNRL 220
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
+ + + + V E++ ++ KD K RP++ ++ L+ G+ +E
Sbjct: 221 LDALCKSRHVERAQEVFDKM------------KDRK----FRPDIKSYTILLEGWGQEQN 264
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
++++V+ EM G EPD +Y +L+ C+ RR A +L+ +M Y T
Sbjct: 265 LLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCT 324
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G + A +FF SG + T+ +V YC++ +D A + ++M + G
Sbjct: 325 LINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCG 384
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
P+ T ++++ L RR EA + + + G P+ +Y +++ C E +++ A
Sbjct: 385 VGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMA 444
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
L+V EM KG P + ++S I+ E ++ A EM + +R
Sbjct: 445 LRVWDEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIR 492
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 1/140 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMA-RLGCEPDCYSYSVLMAVFCE 294
D R V P T++ ++ + ++ V+ M+ GCEP +Y +++ +FC
Sbjct: 378 DEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCN 437
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E R+ A ++W+EM+ K V + ++T+I C ++ A ++F EM G+ +
Sbjct: 438 EERVDMALRVWDEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAM 497
Query: 355 FEHLVNGYCRAGDVDSAILV 374
F +L G D +++
Sbjct: 498 FSNLKQTLLDEGKQDMVLIL 517
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 120/243 (49%), Gaps = 4/243 (1%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMA---RLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++N ++ R G ++ + M+ C P+ SY+VLM C +R +A L
Sbjct: 79 SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
MR V DVV Y T+I G C+ E+ +A E EM SG+E + V + L+ GYC++
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + V+ +M KG EP+ LI LC + +A ++ +V+ GL P +
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDM-MVRRGLEPNVVT 257
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI +C+EG ++EA+ V +M KG P + Y+ I G ++ A L +EM
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317
Query: 486 ENQ 488
+
Sbjct: 318 RGK 320
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 128/259 (49%), Gaps = 2/259 (0%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
+D G+ + + R VR +V T+ L+ G +K ++ EM G EP+ YS
Sbjct: 131 ADQAVGLLRSM-RSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L+ +C+ R + K++ EM +K +E DVV Y +I C++G+ +A M
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+E + VT+ L+N C+ G V AI V M KG P+ T LI L D + EA
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309
Query: 407 LDILKARVVKFGLF-PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+ +L+ V + P ++ +I+GLC+ G+M +A +V+A M G +L Y+ I
Sbjct: 310 MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLI 369
Query: 466 DGYMKEGNVEMATMLRKEM 484
G ++ V A L EM
Sbjct: 370 GGLLRVHKVRKAMELMDEM 388
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 154/330 (46%), Gaps = 21/330 (6%)
Query: 161 FDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
+++LI C C E ++ + +++ + +G++ V T N LI KG+ E+
Sbjct: 258 YNVLINCMCKE----GSVKEAIGVLKKMSEKGVAPDVVTYNTLI------KGLSDVLEMD 307
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
++ L+ GK++ V+PNV TFN+++ G G + V M GC
Sbjct: 308 EAMWLLEEMVR---GKNI-----VKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCM 359
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
+ +Y++L+ ++R+A +L +EM +E D Y+ +I GFC++ ++ RAE+
Sbjct: 360 VNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDL 419
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
M G+E + L+ C G ++ A ++N+M F + +I C
Sbjct: 420 LSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACK 478
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+ A ++LK+ +V GL P +Y +I + G ME A V +M GF P +
Sbjct: 479 AGDLKTAKELLKS-IVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVA 537
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ + I GY +G + L +EM +
Sbjct: 538 VFDSLIQGYSTKGEINKVLELIREMITKNI 567
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 123/246 (50%), Gaps = 3/246 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPN ++ LM + ++ + M G D +Y L+ C+ + +A +
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L EM + +E +VV Y++++ G+C+ G + F EM G+E V + L++ C
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G A V + M R+G EP T VLI +C + V EA+ +LK ++ + G+ P
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLK-KMSEKGVAPDV 290
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMV-GKGF-EPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LIKGL + +M+EA+ + EMV GK +P++ +++ I G G + A +R
Sbjct: 291 VTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVR 350
Query: 482 KEMFEN 487
M E
Sbjct: 351 AMMEET 356
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 120/302 (39%), Gaps = 56/302 (18%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
+I ++ + M+ G V + T N LI + R V E+ E+ L
Sbjct: 339 DIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG------ 392
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+ P+ T++ L+ GF + ++ ED+ M G EP+ + Y L+
Sbjct: 393 ----------LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAM 442
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
CE+ M A L+ EM D N DVVAY+T+I G C+ G++ A+E + + G+ +
Sbjct: 443 CEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDA 501
Query: 353 VT-----------------------------------FEHLVNGYCRAGDVDSAILVYND 377
VT F+ L+ GY G+++ + + +
Sbjct: 502 VTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIRE 561
Query: 378 MCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
M K + I L L + + + ++L A + K G + + M ++ +C
Sbjct: 562 MITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFSAEISK-GNINSPQELMKVLHNVC 620
Query: 435 EE 436
+
Sbjct: 621 PQ 622
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 41/208 (19%)
Query: 290 AVFCEERRMR-----EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
A C R +R EA L + + D V+YNT++ C G RA R M
Sbjct: 48 AAACLNRHLRLLPLGEATSLLDALPSV---RDAVSYNTVLTALCRRGHHDRAGALLRAMS 104
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
L + CR P + VL+ LC R
Sbjct: 105 LEP----------------------------HPACR----PNAVSYTVLMRALCADRLAD 132
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+A+ +L++ + G+ +Y LI+GLC+ ++++A+++ EM G EP++ +YS+
Sbjct: 133 QAVGLLRS-MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191
Query: 465 IDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ GY K G E + EM E + +
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPD 219
>gi|125526348|gb|EAY74462.1| hypothetical protein OsI_02350 [Oryza sativa Indica Group]
Length = 596
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 126/248 (50%), Gaps = 1/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VRPN HTFN L+ R E+ + E+ G EPD +Y+ L++ +C R+++A
Sbjct: 206 VRPNAHTFNILVAALCRGEDAERAQGFLEELEEQGFEPDGVTYNTLLSGYCRRGRLQDAL 265
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++ M + V+ D+V++ ++ C+ G + A F M SG+ +V + L+ GY
Sbjct: 266 HLFDVMPYRRVQPDLVSHTVVMDALCKAGRVRDARRMFDRMIQSGLSPDAVAYSVLIAGY 325
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G + A + +M GF EG ++V++ ++ L+++ A + K G+
Sbjct: 326 CNEGRLREARFLLMEMVGCGFSSEGFALKVVVESHVKFSKLLTCLNMV-APIRKHGVVIP 384
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+SY LI LCE+ + A + M+ G PSL IY+ I+ + + VE A ++
Sbjct: 385 SQSYSCLIGALCEDMRPNAARGLLHWMIEDGHSPSLAIYNMIIECFCQCDIVEEALDVKV 444
Query: 483 EMFENQVR 490
EM +VR
Sbjct: 445 EMISREVR 452
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Query: 302 EKLWEE---MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+ LW M V + +N ++ C + RA+ F E+ G E VT+ L
Sbjct: 192 DDLWAARAVMARAGVRPNAHTFNILVAALCRGEDAERAQGFLEELEEQGFEPDGVTYNTL 251
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++GYCR G + A+ +++ M + +P+ + V++ LC RV +A + R+++ G
Sbjct: 252 LSGYCRRGRLQDALHLFDVMPYRRVQPDLVSHTVVMDALCKAGRVRDARRMFD-RMIQSG 310
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
L P +Y LI G C EG++ EA + EMVG GF
Sbjct: 311 LSPDAVAYSVLIAGYCNEGRLREARFLLMEMVGCGF 346
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 7/250 (2%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
DV RV+P++ + +M + G ++ M + G PD +YSVL+A +C E
Sbjct: 269 DVMPYRRVQPDLVSHTVVMDALCKAGRVRDARRMFDRMIQSGLSPDAVAYSVLIAGYCNE 328
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+REA L EM + A ++ + ++ + GV S ++
Sbjct: 329 GRLREARFLLMEMVGCGFSSEGFALKVVVESHVKFSKLLTCLNMVAPIRKHGVVIPSQSY 388
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKA 412
L+ C ++A + + M G P + ++I C V EALD+ + +
Sbjct: 389 SCLIGALCEDMRPNAARGLLHWMIEDGHSPSLAIYNMIIECFCQCDIVEEALDVKVEMIS 448
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
R V+ +Y LI C G+ + + AEM+ GF+P+ I SA + G+ KEG
Sbjct: 449 REVRLDF----NTYRALITCFCRLGRSLDGELIMAEMIESGFQPNEAICSALVCGFCKEG 504
Query: 473 NVEMATMLRK 482
+ A ++ +
Sbjct: 505 ALNRAELILR 514
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 1/187 (0%)
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
SYS L+ CE+ R A L M + + YN II FC+ + A + EM
Sbjct: 387 SYSCLIGALCEDMRPNAARGLLHWMIEDGHSPSLAIYNMIIECFCQCDIVEEALDVKVEM 446
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
V T+ L+ +CR G L+ +M GF+P + L+ C + +
Sbjct: 447 ISREVRLDFNTYRALITCFCRLGRSLDGELIMAEMIESGFQPNEAICSALVCGFCKEGAL 506
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
A IL+A V+ F + E SY L++ CE +E+L++Q M+ GF P+ E +
Sbjct: 507 NRAELILRAFVLDFHVHCNE-SYNALMRAYCETTSSKESLELQNRMLELGFVPNSETCRS 565
Query: 464 FIDGYMK 470
I G K
Sbjct: 566 LILGLSK 572
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ +N ++ F + E+ DV VEM D +Y L+ FC R + E +
Sbjct: 418 PSLAIYNMIIECFCQCDIVEEALDVKVEMISREVRLDFNTYRALITCFCRLGRSLDGELI 477
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM + + + + ++ GFC+ G + RAE R L + ++ L+ YC
Sbjct: 478 MAEMIESGFQPNEAICSALVCGFCKEGALNRAELILRAFVLDFHVHCNESYNALMRAYCE 537
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
++ + N M GF P T LI
Sbjct: 538 TTSSKESLELQNRMLELGFVPNSETCRSLI 567
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 11/131 (8%)
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLF 420
RAG D M R G P T +L+ LC D R L+ L+ + G
Sbjct: 187 RAGRFDDLWAARAVMARAGVRPNAHTFNILVAALCRGEDAERAQGFLEELEEQ----GFE 242
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y L+ G C G++++AL + M + +P L ++ +D K G V A
Sbjct: 243 PDGVTYNTLLSGYCRRGRLQDALHLFDVMPYRRVQPDLVSHTVVMDALCKAGRVRDA--- 299
Query: 481 RKEMFENQVRQ 491
+ MF+ ++
Sbjct: 300 -RRMFDRMIQS 309
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 101/254 (39%), Gaps = 20/254 (7%)
Query: 137 NDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKV 196
N+ +L+ L+ CG + F L + VK K+ TC+++V + G+ +
Sbjct: 327 NEGRLREARFLLMEMVGCGFSSEGFALKVVVESHVK-FSKLLTCLNMVAPIRKHGVVIPS 385
Query: 197 STCNALI-----------------WEVSRGKG-VISGYEIYREVFGLDSDATAGIGKDVK 238
+ + LI W + G ++ Y + E F + V+
Sbjct: 386 QSYSCLIGALCEDMRPNAARGLLHWMIEDGHSPSLAIYNMIIECFCQCDIVEEALDVKVE 445
Query: 239 RVVR-VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
+ R VR + +T+ AL+ F R G E + EM G +P+ S L+ FC+E
Sbjct: 446 MISREVRLDFNTYRALITCFCRLGRSLDGELIMAEMIESGFQPNEAICSALVCGFCKEGA 505
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ AE + H +YN ++ +CE + E M G +S T
Sbjct: 506 LNRAELILRAFVLDFHVHCNESYNALMRAYCETTSSKESLELQNRMLELGFVPNSETCRS 565
Query: 358 LVNGYCRAGDVDSA 371
L+ G ++ D+ S+
Sbjct: 566 LILGLSKSIDLVSS 579
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%)
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
F+ L +A + + G+ P ++ L+ LC E A E+ +GFEP Y+
Sbjct: 191 FDDLWAARAVMARAGVRPNAHTFNILVAALCRGEDAERAQGFLEELEEQGFEPDGVTYNT 250
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ GY + G ++ A L M +V+ +
Sbjct: 251 LLSGYCRRGRLQDALHLFDVMPYRRVQPD 279
>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 160/319 (50%), Gaps = 14/319 (4%)
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
ET + I+ +L G + K++ ++ ++ + KG+ +++ V +DS AGI ++
Sbjct: 46 ETHLKIIEIL---GRASKLNHARCILLDMPK-KGLEWDEDLW--VLMIDSYGKAGIVQES 99
Query: 238 KRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
++ + V + +++AL R G + + + +M G EP ++++V+M
Sbjct: 100 VKMFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWG 159
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
F ++ A + +E+M+ + + DVV YNT++ G+C + +M AE++F EM +E +
Sbjct: 160 FFLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
VT+ L+ GY VD A+ + +M G +P T L+ LC+ ++ EA ILK
Sbjct: 220 VVTYTTLIKGYVSVDRVDDALRLVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILK 279
Query: 412 ARVVKFGLFPTEKS-YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
V K+ + PT+ S +M LI G C+ G ++ A V M+ Y I+ Y K
Sbjct: 280 EMVEKY-IAPTDNSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCK 338
Query: 471 EGNVEMATMLRKEMFENQV 489
G + A L ++ E +
Sbjct: 339 AGEYDKAIKLLDKVIEKDI 357
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/469 (21%), Positives = 186/469 (39%), Gaps = 87/469 (18%)
Query: 82 KNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPAR----DVIRVALRSPEN 137
KN+ H AL+FF + + +L +H+ ++ II IL RA + AR D+ + L E+
Sbjct: 23 KNSEH-ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDED 81
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVD-----IVR------- 185
L+ +++ +Y + G + K +E +E+ D I+R
Sbjct: 82 -----LWVLMIDSYGKAGIVQESVKMFQK--MEELGVERTIKSYDALFKVILRRGRYMMA 134
Query: 186 -----MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
++S G+ T N ++W V + + ++ +
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDM----------------KS 178
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ P+V T+N ++ G+ R E+ E +VEM EP +Y+ L+ + R+ +
Sbjct: 179 REIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDD 238
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE-SSSVTFEHLV 359
A +L EEM+ ++ + + Y+T++ G C +M+ A +EM + + + F L+
Sbjct: 239 ALRLVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTDNSIFMRLI 298
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK-FG 418
+G C+AGD+D+A V M R E VLI C +A+ +L + K
Sbjct: 299 SGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDII 358
Query: 419 LFPTEKSYM----------------------------------------FLIKGLCEEGK 438
L P +M LI+G +EG
Sbjct: 359 LRPQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTALNTLIRGHSQEGS 418
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ A ++ M+ + + Y + + Y+K+ A M EN
Sbjct: 419 PDSAFELLKIMLRRKVDSEQSSYDSLVQSYLKKNEPADAKAALDSMIEN 467
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 111/229 (48%), Gaps = 7/229 (3%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
+ ++M + G E D + +++ + + ++E+ K++++M + VE + +Y+ +
Sbjct: 67 ILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVIL 126
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
G A+ +F +M G+E + TF ++ G+ +G V++A + DM + P+
Sbjct: 127 RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVV 186
Query: 389 TIEVLIGELCDKRRVFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
T ++ C +++ EA +K R ++ PT +Y LIKG ++++AL++
Sbjct: 187 TYNTMVNGYCRVKKMEEAEKYFVEMKGRNIE----PTVVTYTTLIKGYVSVDRVDDALRL 242
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
EM G G +P+ YS + G + A + KEM E + D
Sbjct: 243 VEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTDN 291
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 130/264 (49%), Gaps = 19/264 (7%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN+L+ G + ++ MA+ GCEP+ SYS L+ C+ R+ EA +L
Sbjct: 142 PDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRL 201
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF--------- 355
WEEM +K+ D+VAY + + G C+ +A A + R+M G ++ +V F
Sbjct: 202 WEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCK 261
Query: 356 --------EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
++ CR+G +D A + +M + P LI +C +R+ + +
Sbjct: 262 KGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321
Query: 408 DILK--ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+ + + +F P ++Y ++ LC+ +++EA ++ EM G P + YSA +
Sbjct: 322 LLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALV 381
Query: 466 DGYMKEGNVEMATMLRKEMFENQV 489
DG K G ++ A L +EM + V
Sbjct: 382 DGLCKLGKLDRACDLLEEMSKEGV 405
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 1/210 (0%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M C P+ +Y++++ C+ +++ EA++L EM + + DVV Y+ ++ G C++G+
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ RA + EM GV S T ++N +AG VD A+ M +G P+ T
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
L+ LC R+ EA+ L A++V P SY +I LC G+ A + EMV +
Sbjct: 450 LLDGLCKAGRIDEAITFL-AKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKR 508
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
G P +Y + +DG + G ++A L K
Sbjct: 509 GVLPDTVLYHSLLDGLARNGLEDLALELLK 538
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 115/250 (46%), Gaps = 4/250 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V T++AL+ G + G ++ D+ EM++ G PD ++ + ++ + ++ A
Sbjct: 370 LSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYAL 429
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
E M+ + D+V YNT++ G C+ G + A F +M + ++ ++
Sbjct: 430 SHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITAL 489
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR+G A ++ +M ++G P+ L+ L AL++LK + K P
Sbjct: 490 CRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCK----PD 545
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ ++ GLC+ GK E+A +V M GF Y + + G K G V+ A L
Sbjct: 546 FVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVD 605
Query: 483 EMFENQVRQE 492
+ E E
Sbjct: 606 DASETHTSVE 615
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 118/246 (47%), Gaps = 5/246 (2%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V T+N + + A + + + +M R G PD ++YS+++ C+ + +A++L
Sbjct: 37 SVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELL 96
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL-SGVESSSVTFEHLVNGYCR 364
++R+ V+ +V+ Y+ +I G C+ + A E F+ M G VTF L+ G C
Sbjct: 97 GQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCS 156
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ A +++ M + G EP + L+ LC R+ EA + + V K P
Sbjct: 157 GERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEK-SCVPDLV 215
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y + GLC+ ++ EA +MV KG + +S I K+G+ E A + +M
Sbjct: 216 AYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEA---QNQM 272
Query: 485 FENQVR 490
E+ R
Sbjct: 273 IEHLCR 278
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 82/178 (46%)
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
R K +H V YN + + A E F++M G T+ ++ G C+AG++
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D A + + G + T V+I C RV +AL+I K G P ++
Sbjct: 90 DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNS 149
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
L+KGLC +M EA + M G EP++ YS +DG K G ++ A L +EM E
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVE 207
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 215/489 (43%), Gaps = 39/489 (7%)
Query: 14 SKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCR--SGLTP 71
++P P P + +T +S+ + + A V +LL+ R W +++ S L+P
Sbjct: 24 TRPPPAPFTTTASTTDTSSSMAADPDGVAAEVATLLS--RCTGDWKQVIAASDIPSRLSP 81
Query: 72 TQFSQIALGLKNNPHL----ALRFFSFTQHK-SLCKHSLSSYATIIHILSRARLIGPARD 126
S + ++P L L FF +++ + + + ++A + L A L A
Sbjct: 82 AALSSLLRRCNSSPRLHPKLLLDFFYWSRTRLAPSAPAPDAFAHLAVSLCAAGLYPQANG 141
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYR-----ECGSAPFVFDLLIKCCLEVKNIEKIETCV 181
++ +R+ P VL +R + G P V D+L+ K ++
Sbjct: 142 LLDQMIRAYPTPPL-----VLSSVHRALSGSDQGRRPVVLDVLVD---TYKKTGRVRDGA 193
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
++V ++ GL+ + CN L+ ++ R + +++ + G AGI
Sbjct: 194 EVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEG------AGI-------- 239
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
P+V+T++ L+ + + E + V EM GC + +Y+ L+ C + EA
Sbjct: 240 --SPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+EM D + D Y II G C+ G +A+ EM +G+ + V + L++G
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDG 357
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ R G+ D A + +M G +P T + LI LC R+ A ILK ++ K G
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILK-QMTKIGYMA 416
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y +I+G + EEA + EM G P++ YS I+G + G E A+ L
Sbjct: 417 DTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLL 476
Query: 482 KEMFENQVR 490
++M + ++
Sbjct: 477 EQMIADGLK 485
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 129/521 (24%), Positives = 209/521 (40%), Gaps = 61/521 (11%)
Query: 14 SKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHL-LSLCRSGLTPT 72
S P+ P+LL F S T L + + HL +SLC +GL P
Sbjct: 93 SSPRLHPKLLLDFFYWSRT--------------RLAPSAPAPDAFAHLAVSLCAAGLYPQ 138
Query: 73 QFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHIL-SRARLIGPARDVIRVA 131
+ ++ P L S H++L ++ +L + G RD V
Sbjct: 139 ANGLLDQMIRAYPTPPLVLSSV--HRALSGSDQGRRPVVLDVLVDTYKKTGRVRDGAEVV 196
Query: 132 LRSPEND--PKLKLFEVLVKTYRE----------------CGSAP--FVFDLLIKCCLEV 171
L + P L+ L+K G +P + + LI+ +V
Sbjct: 197 LLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKV 256
Query: 172 KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV--ISGYEIYREVFGLDSDA 229
+++E + V+ +R G S+ V T N LI + R + GY+ E +GL D
Sbjct: 257 RDLESAKKVVEEMR---ETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDG 313
Query: 230 ------TAGIGK-----------DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
G+ K D + PNV ++ L+ GF R+G ++ + E
Sbjct: 314 FTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKE 373
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M+ G +P+ +Y L+ C+ RM A ++ ++M D + YN +I G
Sbjct: 374 MSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHN 433
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
A EM G+ + T+ ++NG C+ G+ + A + M G +P
Sbjct: 434 KEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAP 493
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI C + A + LK ++ + L P Y LI GL GKM+EA++ EM+ K
Sbjct: 494 LISGYCREGSFSLACETLK-KMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEK 552
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
GF+P+ Y I GY GN+E A L +M + + D
Sbjct: 553 GFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPND 593
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 1/235 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN + L+ G+ REG+F + +M R PD Y Y+ L+ +M EA
Sbjct: 484 LKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAI 543
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ ++EM +K + + Y +I G+ G + +AE+ +M SG+ + + ++ GY
Sbjct: 544 EYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGY 603
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
++ +++ M KG P+ ++I L + A+ +L + K GL P
Sbjct: 604 FKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSV-IEKNGLVPD 662
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
Y LI G C+ ME+A+ + EM KG EP + Y+A IDG+ K ++ A
Sbjct: 663 SLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHA 717
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 2/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + ++ G + V + + G PD Y L++ FC+ M +A L
Sbjct: 626 PDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGL 685
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EM K +E + YN +I GFC+ +++ A F + G+ + VT+ L++GYC+
Sbjct: 686 LDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCK 745
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AGD+ AI +YN+M +G P+ VL + + +AL I + + + +
Sbjct: 746 AGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARG--YAIIS 803
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
S+ L+ G C+ GK++E +K M+ K PSL + G + G + A + E+
Sbjct: 804 SFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVEL 863
Query: 485 FENQVRQED 493
+ D
Sbjct: 864 QQKNASHRD 872
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 115/242 (47%), Gaps = 1/242 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN T+ L+ G+ G EK E + +M G P+ + Y+ ++ + + + +
Sbjct: 555 QPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSS 614
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ M +K + D Y +I G M A + +G+ S+ + L++G+C
Sbjct: 615 TLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFC 674
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+A D++ A+ + ++M +KG EP S LI C + A +I + + K GL P
Sbjct: 675 KAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICK-GLPPNC 733
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI G C+ G + +A+ + EM+ +G P +YS G G+++ A + +E
Sbjct: 734 VTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEE 793
Query: 484 MF 485
M
Sbjct: 794 MI 795
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 109/247 (44%), Gaps = 2/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN + ++ G+++ EKV M G PD Y +++ M+ A
Sbjct: 589 LNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAV 648
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + + D + Y ++I GFC+ +M +A EM G+E + L++G+
Sbjct: 649 SVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGF 708
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++ D+ A ++N + KG P T LI C + +A+D+ + + G+ P
Sbjct: 709 CKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTE-GVAPD 767
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y L G G +++AL + EM+ +G+ + ++ + G+ K G ++
Sbjct: 768 AFVYSVLAAGCSNSGDLQQALFITEEMIARGYA-IISSFNTLVHGFCKRGKLQETVKFLH 826
Query: 483 EMFENQV 489
M + +
Sbjct: 827 VMMDKDI 833
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 21/230 (9%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P + +NAL+ GF + +++ + G P+C +Y+ L+ +C+ +R+A
Sbjct: 694 IEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAI 753
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ EM + V D Y+ + G G++ +A EM G S +F LV+G+
Sbjct: 754 DLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIIS-SFNTLVHGF 812
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVF------------ 404
C+ G + + + M K P T+E ++ G+L + +F
Sbjct: 813 CKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRD 872
Query: 405 -EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ L L ++ GL P + + +I+ C++G +++AL + +V KG
Sbjct: 873 TDHLSSLFTDMINQGLVPLDVIHN-MIQSHCKQGYLDKALMLHDALVAKG 921
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 124/250 (49%), Gaps = 1/250 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V + PNV TFN ++ + G + ++ +M C+PD Y+Y LM C+ R+ E
Sbjct: 163 VNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDE 222
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L +EM+ V +N +I G C+ G++AR + M L G + VT+ L++
Sbjct: 223 AVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIH 282
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C G ++ AI + + M P T +I L + R + +L A + + G
Sbjct: 283 GLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVL-ALMEERGYH 341
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
E Y LI GL +EGK +EA+++ EM K E + +YSA IDG ++G + A +
Sbjct: 342 VNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEV 401
Query: 481 RKEMFENQVR 490
EM N+ +
Sbjct: 402 LSEMTNNRCK 411
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 1/254 (0%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V + +P+V+T+ LM G + ++ + EM GC P +++VL+ C++ +
Sbjct: 197 VSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLA 256
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
KL + M K + V YNT+I G C G++ +A M S + VT+ ++
Sbjct: 257 RVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTII 316
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
NG + G V M +G+ LI L + + EA+ + K VK
Sbjct: 317 NGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECE 376
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
T Y +I GLC +GK +EAL+V +EM +P+ YS+ + G+ + GN A
Sbjct: 377 LNT-IVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIE 435
Query: 480 LRKEMFENQVRQED 493
+ K+M ++ Q +
Sbjct: 436 MWKDMAKHNFTQNE 449
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 155/335 (46%), Gaps = 22/335 (6%)
Query: 154 CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVI 213
C +P F++LI + ++ ++ VD + +G + T N LI G+
Sbjct: 235 CFPSPVTFNVLINGLCKKGDLARVAKLVD---NMFLKGCAPNEVTYNTLI------HGLC 285
Query: 214 SGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
++ + + LD ++ + PNV T+ ++ G ++G V M
Sbjct: 286 LKGKLEKAISLLDRMVSS----------KCVPNVVTYGTIINGLVKQGRALDGARVLALM 335
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
G + Y YS L++ +E + +EA +L++EM K E + + Y+ +I G C G+
Sbjct: 336 EERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKP 395
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
A E EM + + ++ T+ L+ G+ AG+ AI ++ DM + F VL
Sbjct: 396 DEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVL 455
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK- 452
I LC +V EA+ ++ A+++ G P +Y +I GL G +E+AL++ EM+ +
Sbjct: 456 IHGLCKDGKVKEAM-MVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQE 514
Query: 453 -GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+P + Y+ ++ K+ ++ A L M +
Sbjct: 515 PDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLD 549
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 111/226 (49%), Gaps = 24/226 (10%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R +PN +T+++LM GF+ G K ++W +MA+ + YSVL+ C++ +++EA
Sbjct: 409 RCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEA 468
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS--VTFEHLV 359
+W +M K + DVVAY ++I G G + A + + EM +S VT+ L+
Sbjct: 469 MMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILL 528
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGST---------------------IEVLIGELC 398
N C+ + AI + N M +G +P+ T ++ L+ L
Sbjct: 529 NALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLL 588
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
++RV A I++ + K L P ++ +++ LC K++ A++
Sbjct: 589 KRQRVLGASKIVEVMLQKL-LPPKPSTWTRVVEDLCNPKKVQAAIQ 633
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N + ++AL+ G ++EG ++ ++ EM CE + YS ++ C + + EA ++
Sbjct: 343 NEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVL 402
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM + + + Y++++ GF E G +A E +++M + V + L++G C+
Sbjct: 403 SEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKD 462
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK-FGLFPTEK 424
G V A++V+ M KG +P+ +I L + V +AL + + + P
Sbjct: 463 GKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVV 522
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+Y L+ LC++ + A+ + M+ +G +P L
Sbjct: 523 TYNILLNALCKQSSISRAIDLLNSMLDRGCDPDL 556
>gi|125570756|gb|EAZ12271.1| hypothetical protein OsJ_02159 [Oryza sativa Japonica Group]
Length = 596
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 126/248 (50%), Gaps = 1/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VRPN HTFN L+ R E+ + E+ G EPD +Y+ L++ +C R+++A
Sbjct: 206 VRPNAHTFNILVAALCRGEDAERAQGFLEELEEQGFEPDGVTYNTLLSGYCRRGRLQDAL 265
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++ M + V+ D+V++ ++ C+ G + A F M SG+ +V + L+ GY
Sbjct: 266 HLFDVMPYRRVQPDLVSHTVVMDALCKAGRVRDARRMFDRMIQSGLSPDAVAYSVLIAGY 325
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G + A + +M GF EG ++V++ ++ L+++ A + K G+
Sbjct: 326 CNEGRLREARFLLMEMVGCGFSSEGFALKVVVESHVKFSKLLTCLNMV-APIRKHGVVIP 384
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+SY LI LCE+ + A + M+ G PSL IY+ I+ + + VE A ++
Sbjct: 385 SQSYSCLIGALCEDMRPNAARGLLHWMIEDGHSPSLAIYNMIIECFCQCDIVEEALDVKV 444
Query: 483 EMFENQVR 490
EM +VR
Sbjct: 445 EMISREVR 452
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 7/250 (2%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
DV RV+P++ + +M + G ++ M + G PD +YSVL+A +C E
Sbjct: 269 DVMPYRRVQPDLVSHTVVMDALCKAGRVRDARRMFDRMIQSGLSPDAVAYSVLIAGYCNE 328
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+REA L EM + A ++ + ++ + GV S ++
Sbjct: 329 GRLREARFLLMEMVGCGFSSEGFALKVVVESHVKFSKLLTCLNMVAPIRKHGVVIPSQSY 388
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKA 412
L+ C ++A + + M G P + ++I C V EALD+ + +
Sbjct: 389 SCLIGALCEDMRPNAARGLLHWMIEDGHSPSLAIYNMIIECFCQCDIVEEALDVKVEMIS 448
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
R V+ +Y LI C G+ + + AEM+ GF+P+ I SA + G+ KEG
Sbjct: 449 REVRLDF----NTYRALITCFCRLGRSLDGESIMAEMIESGFQPNEAICSALVCGFCKEG 504
Query: 473 NVEMATMLRK 482
+ A ++ +
Sbjct: 505 ALNRAELILR 514
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Query: 302 EKLWEE---MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+ LW M V + +N ++ C + RA+ F E+ G E VT+ L
Sbjct: 192 DDLWAARAVMARAGVRPNAHTFNILVAALCRGEDAERAQGFLEELEEQGFEPDGVTYNTL 251
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++GYCR G + A+ +++ M + +P+ + V++ LC RV +A + R+++ G
Sbjct: 252 LSGYCRRGRLQDALHLFDVMPYRRVQPDLVSHTVVMDALCKAGRVRDARRMFD-RMIQSG 310
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
L P +Y LI G C EG++ EA + EMVG GF
Sbjct: 311 LSPDAVAYSVLIAGYCNEGRLREARFLLMEMVGCGF 346
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 1/187 (0%)
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
SYS L+ CE+ R A L M + + YN II FC+ + A + EM
Sbjct: 387 SYSCLIGALCEDMRPNAARGLLHWMIEDGHSPSLAIYNMIIECFCQCDIVEEALDVKVEM 446
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
V T+ L+ +CR G + +M GF+P + L+ C + +
Sbjct: 447 ISREVRLDFNTYRALITCFCRLGRSLDGESIMAEMIESGFQPNEAICSALVCGFCKEGAL 506
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
A IL+A V+ F + E SY L++ CE +E+L++Q M+ GF P+ E +
Sbjct: 507 NRAELILRAFVLDFHVHCNE-SYNALMRAYCETTSSKESLELQNRMLELGFVPNSETCRS 565
Query: 464 FIDGYMK 470
I G K
Sbjct: 566 LILGLSK 572
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ +N ++ F + E+ DV VEM D +Y L+ FC R + E +
Sbjct: 418 PSLAIYNMIIECFCQCDIVEEALDVKVEMISREVRLDFNTYRALITCFCRLGRSLDGESI 477
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM + + + + ++ GFC+ G + RAE R L + ++ L+ YC
Sbjct: 478 MAEMIESGFQPNEAICSALVCGFCKEGALNRAELILRAFVLDFHVHCNESYNALMRAYCE 537
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
++ + N M GF P T LI
Sbjct: 538 TTSSKESLELQNRMLELGFVPNSETCRSLI 567
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 11/131 (8%)
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLF 420
RAG D M R G P T +L+ LC D R L+ L+ + G
Sbjct: 187 RAGRFDDLWAARAVMARAGVRPNAHTFNILVAALCRGEDAERAQGFLEELEEQ----GFE 242
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y L+ G C G++++AL + M + +P L ++ +D K G V A
Sbjct: 243 PDGVTYNTLLSGYCRRGRLQDALHLFDVMPYRRVQPDLVSHTVVMDALCKAGRVRDA--- 299
Query: 481 RKEMFENQVRQ 491
+ MF+ ++
Sbjct: 300 -RRMFDRMIQS 309
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 101/254 (39%), Gaps = 20/254 (7%)
Query: 137 NDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKV 196
N+ +L+ L+ CG + F L + VK K+ TC+++V + G+ +
Sbjct: 327 NEGRLREARFLLMEMVGCGFSSEGFALKVVVESHVK-FSKLLTCLNMVAPIRKHGVVIPS 385
Query: 197 STCNALI-----------------WEVSRGKG-VISGYEIYREVFGLDSDATAGIGKDVK 238
+ + LI W + G ++ Y + E F + V+
Sbjct: 386 QSYSCLIGALCEDMRPNAARGLLHWMIEDGHSPSLAIYNMIIECFCQCDIVEEALDVKVE 445
Query: 239 RVVR-VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
+ R VR + +T+ AL+ F R G E + EM G +P+ S L+ FC+E
Sbjct: 446 MISREVRLDFNTYRALITCFCRLGRSLDGESIMAEMIESGFQPNEAICSALVCGFCKEGA 505
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ AE + H +YN ++ +CE + E M G +S T
Sbjct: 506 LNRAELILRAFVLDFHVHCNESYNALMRAYCETTSSKESLELQNRMLELGFVPNSETCRS 565
Query: 358 LVNGYCRAGDVDSA 371
L+ G ++ D+ S+
Sbjct: 566 LILGLSKSIDLVSS 579
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%)
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
F+ L +A + + G+ P ++ L+ LC E A E+ +GFEP Y+
Sbjct: 191 FDDLWAARAVMARAGVRPNAHTFNILVAALCRGEDAERAQGFLEELEEQGFEPDGVTYNT 250
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ GY + G ++ A L M +V+ +
Sbjct: 251 LLSGYCRRGRLQDALHLFDVMPYRRVQPD 279
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 197/448 (43%), Gaps = 39/448 (8%)
Query: 43 ATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCK 102
A + +LL+ H S S + LL ++P+ ++ L N +AL FF++ + + K
Sbjct: 96 ARICTLLSTH-SGSHADKLLEDASIKVSPSLVVEVLKRLSNAGVIALSFFTWAEKQKGFK 154
Query: 103 HSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFD 162
++ SY +I L + + R ++ ++K ++L K F
Sbjct: 155 YNTESYNALIEALGKIKQFKLIRSLVN----------EMKSRKLLNKD---------TFA 195
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
L+ + + K+E ++ + G ++ S N L+ + + + V +++
Sbjct: 196 LISRRHARAR---KVEEAIEAFERMEEFGFKLETSDFNRLLDTLCKSRHVEKANKVF--- 249
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
D + R P++ ++ L+ G+ +E ++++V++EM G EPD
Sbjct: 250 -------------DKMKKRRFVPDIKSYTILLEGWGKEHNLLRLDEVYLEMKYDGFEPDV 296
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+Y +L++ +C+ ++ A +L+ EM KN + Y T+I G ++ A EFF
Sbjct: 297 VTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKRLSEALEFFER 356
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
G + T+ LV YC + +D A V ++M + P T ++++ L RR
Sbjct: 357 FKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLIKARR 416
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
EA + + G PT +Y +++ C E +++ A +V +M KG P + +YS
Sbjct: 417 TNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPGMHMYS 476
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQVR 490
I + + A +EM + +R
Sbjct: 477 DLITSLCHKNKLGEACKYFQEMLDAGIR 504
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 106/250 (42%), Gaps = 28/250 (11%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
+I ++ + D ++LF + + C P V+ LI K ++ ++
Sbjct: 302 LISAYCKAKKYDAAIELFHEM--EAKNCKPTPHVYCTLINGLGSEK---RLSEALEFFER 356
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
S G + + T N+L+ + +++ E+ +AG PN
Sbjct: 357 FKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEM----RKHSAG------------PN 400
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARL----GCEPDCYSYSVLMAVFCEERRMREAE 302
T++ ++ + + + + ++ GCEP +Y +++ +FC E R+ A+
Sbjct: 401 SRTYDIILHHLIKA---RRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAK 457
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++W++M+ K V + Y+ +I C ++ A ++F+EM +G+ + F +L
Sbjct: 458 QVWDQMKAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQAL 517
Query: 363 CRAGDVDSAI 372
G D A+
Sbjct: 518 LDEGKNDEAL 527
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 44/100 (44%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P V T+ ++ F E + + VW +M G P + YS L+ C + ++ EA K
Sbjct: 435 PTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPGMHMYSDLITSLCHKNKLGEACKY 494
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
++EM D + ++ + + G+ A R++
Sbjct: 495 FQEMLDAGIRPPAKMFSNLKQALLDEGKNDEALNLARKIN 534
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 186/428 (43%), Gaps = 44/428 (10%)
Query: 66 RSGLTPTQ--FSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGP 123
+ G+ P ++ I GL +N + + + C S+ +Y ++ L ++ I
Sbjct: 61 KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISD 120
Query: 124 ARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCV 181
A ++++ E G AP V ++ LI ++ N+++ V
Sbjct: 121 A--------------------SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEA---V 157
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
+ ++ S V T N LI + + G ++ +E+ +
Sbjct: 158 VLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCE------------- 204
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
PN T+N LM + G + ++ M R C+P +++++++ +FC+ ++ A
Sbjct: 205 ---PNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLA 261
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L++ M D+ D+ YN +I G C + A + M +G VT+ +V+G
Sbjct: 262 YELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSG 321
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+A VD A VY + G+ + T LI LC RR+ +A +L+ + + G P
Sbjct: 322 LCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLR-EMERNGSAP 380
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI G C+ +++++L +EM+ KG P++ YS ID K V ML
Sbjct: 381 DVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLL 440
Query: 482 KEMFENQV 489
K M E V
Sbjct: 441 KTMLERGV 448
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 113/240 (47%), Gaps = 2/240 (0%)
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
N L+ F R+ ++ D++ C PD +YS L+ FC+ R ++A +L +EM
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
+ + YNTII G C+ G + A +R+M S +T+ LV+ C++ +
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARISD 120
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A L+ DM G P T LI C + EA+ +L ++++ P +Y LI
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV-VLFNQMLENSCSPDVFTYNILI 179
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
G C++ + ++ K+ EMV G EP+ Y+ +D +K G A L + M +
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 239
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V N+ T+N+LM G++ K V+ MAR G PD SYS+++ C+ + + EA
Sbjct: 305 VDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAV 364
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++EM K++ + V YN++I G + G ++ A + EM G + +T+ L++
Sbjct: 365 NLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDAL 424
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ VD AI + + +G +P T +L+ LC R+ +A + + ++K G
Sbjct: 425 CKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIK-GYHLD 483
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
K Y ++ GLC+EG +EAL + ++M G P Y + + + A L +
Sbjct: 484 VKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLR 543
Query: 483 EM 484
EM
Sbjct: 544 EM 545
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 132/246 (53%), Gaps = 1/246 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++P+V+TFN L+ G +EG +K +V M + G + + +Y+ LM + ++ +A
Sbjct: 269 NIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKA 328
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++ M + V DV +Y+ +I G C+ + A F+EM + ++VT+ L++G
Sbjct: 329 TFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDG 388
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ G + A + N+M +G + T L+ LC +V +A+ ++ ++ G+ P
Sbjct: 389 LLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLI-TKIKDQGIQP 447
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y L+ GLC+ G++++A V +++ KG+ +++Y+ ++G KEG + A L
Sbjct: 448 NIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLV 507
Query: 482 KEMFEN 487
+M +N
Sbjct: 508 SKMEDN 513
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 157/361 (43%), Gaps = 40/361 (11%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKC-------------------CLEVKNIEKIET 179
P L F +L+ + G F F +L K CL K E +
Sbjct: 97 PDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHF 156
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
D++ ++G + + LI + + + ++ R++ GL
Sbjct: 157 HDDVI----AKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGL-------------- 198
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V+PNV +N ++ ++ D+ EM PD +Y+ L+ R++
Sbjct: 199 --LVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLK 256
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
EA L+ +M KN++ DV +N ++ G C+ GEM +A M GV+S+ VT+ L+
Sbjct: 257 EAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLM 316
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+GY + A V+N M R+G P+ + ++I LC + V EA+++ K K +
Sbjct: 317 DGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSK-SM 375
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI GL + G++ +A + EM +G + YS+ +D K V+ A
Sbjct: 376 APNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAIT 435
Query: 480 L 480
L
Sbjct: 436 L 436
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 120/243 (49%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+++P++ TFN L+ F G V ++ +LG PD + + L+ C ++REA
Sbjct: 94 QIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREA 153
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+++ K D V+Y T+I G C+ GE A + R++ V+ + V + +++
Sbjct: 154 LHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDS 213
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ V A + ++M K P+ T LI R+ EA+ + ++K + P
Sbjct: 214 LCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLK-NIKP 272
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
++ L+ GLC+EG+M++A V A M+ +G + ++ Y++ +DGY AT +
Sbjct: 273 DVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVF 332
Query: 482 KEM 484
M
Sbjct: 333 NTM 335
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 116/252 (46%), Gaps = 7/252 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P + FN ++ + F +M +PD +++++L+ FC + A
Sbjct: 61 VQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAF 119
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ ++ D V T+I G C G++ A F ++ G V++ L+NG
Sbjct: 120 SVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGL 179
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G+ +A+ V + +P +I LC + V A D+ +VK +FP
Sbjct: 180 CKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVK-RIFPD 238
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE-----MA 477
+Y LI G G+++EA+ + +M+ K +P + ++ +DG KEG ++ +A
Sbjct: 239 VVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLA 298
Query: 478 TMLRKEMFENQV 489
M+++ + N V
Sbjct: 299 VMIKQGVDSNIV 310
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 87/172 (50%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N+L+ G + G D+ EM G D +YS L+ C+ ++ +A L
Sbjct: 377 PNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITL 436
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++D+ ++ ++ Y ++ G C+ G + A+ ++++ + G + +VNG C+
Sbjct: 437 ITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCK 496
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
G D A+ + + M G P+ T E L+ L + + +A+ +L+ +V+
Sbjct: 497 EGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQ 548
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 1/179 (0%)
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
+N + +N I+ ++ A F ++M L ++ TF L+N +C G ++
Sbjct: 58 RNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNF 117
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A V + + GF P+ TI LI LC +V EAL + K G + SY LI
Sbjct: 118 AFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAK-GFHLDQVSYGTLI 176
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
GLC+ G+ AL+V ++ G +P++ +Y+ ID K+ V A+ L EM ++
Sbjct: 177 NGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRI 235
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 1/210 (0%)
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+ ++ +++ + A ++M K ++ D+ +N +I FC +G + A +
Sbjct: 65 FEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAK 124
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
+ G +VT L+ G C G V A+ ++D+ KGF + + LI LC
Sbjct: 125 IFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGE 184
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
AL +L+ ++ + P Y +I LC++ + A + +EM+ K P + Y+
Sbjct: 185 TRAALQVLR-KIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYT 243
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
I G + G ++ A L +M ++ +
Sbjct: 244 TLIYGCLIVGRLKEAVGLFNQMLLKNIKPD 273
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 121/271 (44%), Gaps = 38/271 (14%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
++ V++ + + S+ ++ T N+LI + + + +++ E+
Sbjct: 360 VDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHN------------ 407
Query: 237 VKRVVRVRP-NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R +P +V T+++L+ + +K + ++ G +P+ Y+Y++L+ C+
Sbjct: 408 -----RGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKN 462
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+++A+ +++++ K DV YN ++ G C+ G A +M +G +VT+
Sbjct: 463 GRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTY 522
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
E LV D A+ + +M +G GS I LC V++A A +
Sbjct: 523 ETLVRALFENDKNDKAVKLLREMIVQG-SAVGSNISS-NSMLC----VYQA-----APLA 571
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
FG+F + I GL G +A K+Q
Sbjct: 572 SFGVF-------WFIFGLASLGL--DAFKIQ 593
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 146/299 (48%), Gaps = 17/299 (5%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
++ K++ + ++ RG+++ V+T N L+ + Y + E+
Sbjct: 231 DVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEM---------- 280
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+ P+V T+N L+ G+ +EG +K +V+ EM++ G +Y+ L+ VF
Sbjct: 281 ------QKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVF 334
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
+ +++E ++L+ K + DVV YN +I C G+M RA E EM +
Sbjct: 335 SRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDD 394
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
+T+ L+ G+C G +D A + ++M ++G +P+ + LI K + +AL + +
Sbjct: 395 MTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRV-RD 453
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
++ G PT +Y LI+GLC+ + ++A + EMV KG P Y + I+G E
Sbjct: 454 EMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTE 512
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 123/248 (49%), Gaps = 1/248 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
V T+N LM + + V EM + G PD ++Y++L+ +C+E ++A +++
Sbjct: 253 TVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVF 312
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EEM K V V Y ++I F G++ + F G+ V + L+N +C
Sbjct: 313 EEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTG 372
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
GD++ A + +M +K P+ T L+ C R+ EA ++ + K G+ P S
Sbjct: 373 GDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLID-EMTKRGIQPDLVS 431
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI G +G +++AL+V+ EM+ KGF P+L Y+A I G K + A L KEM
Sbjct: 432 YNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMV 491
Query: 486 ENQVRQED 493
+ +D
Sbjct: 492 AKGITPDD 499
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 131/252 (51%), Gaps = 3/252 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEM-ARLGCEPDCYSYSVLMAVFCEERRMREAE 302
RPN T+N ++ GF G + +V EM R G PD Y+Y+ L++ +C+ RM +A
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAV 203
Query: 303 KLWEEMRDKN-VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+++EM K V V YN +IGG+C++G++ A ++ +M G+ + T+ L++
Sbjct: 204 KVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHA 263
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
A V +M + GF P+ T +LI C + +AL++ + K G+
Sbjct: 264 LFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQK-GVRA 322
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
T +Y LI +G+++E ++ V KG P + +Y+A I+ + G++E A +
Sbjct: 323 TAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIM 382
Query: 482 KEMFENQVRQED 493
EM + ++ +D
Sbjct: 383 AEMEKKRIPPDD 394
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 11/246 (4%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V + + L+ AF D++ RL ++++++ C + A +L
Sbjct: 85 VASLHPLLSSLPSAPAFALFADIY----RLRLPLCTTTFNIMLRHLCATGKPVRALELLR 140
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG-LSGVESSSVTFEHLVNGYCRA 365
+M N V YNT+I GFC G + A E REM G+ T+ L++G+C+
Sbjct: 141 QMPRPNA----VTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKI 196
Query: 366 GDVDSAILVYNDMCRKG-FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G ++ A+ V+++M KG P LIG CD ++ AL + +V+ G+ T
Sbjct: 197 GRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQY-REDMVQRGIAMTVA 255
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L+ L + + +A V EM GF P + Y+ I+GY KEGN + A + +EM
Sbjct: 256 TYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEM 315
Query: 485 FENQVR 490
+ VR
Sbjct: 316 SQKGVR 321
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 123/251 (49%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P V TFN L+ + R G EK V EM G +P+ SY ++ FC+ ++ EA
Sbjct: 256 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 315
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ ++M K+V + YN II + E G +A +M +G+ S VT+ L+ G
Sbjct: 316 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 375
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C + A + N + P+ + LI C + + +ALD L+ R+ K+G+ T
Sbjct: 376 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD-LQQRMHKYGIKST 434
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++Y LI GL G++ E + +M+ PS I++ ++ Y K GN A LRK
Sbjct: 435 VRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRK 494
Query: 483 EMFENQVRQED 493
EM + + +D
Sbjct: 495 EMLQKRNNHDD 505
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 118/248 (47%), Gaps = 1/248 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++P+ T+NAL+ G + +D+ +EM G P +++ L+ + ++ +
Sbjct: 220 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 279
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ EM++ ++ +VV+Y +I+ FC+ G++ A +M V ++ + +++
Sbjct: 280 FIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDA 339
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
Y G D A ++ M G P T +LI LC++ ++ EA +I+ + + L P
Sbjct: 340 YVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINS-LSNHRLIP 398
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
SY LI C G +++AL +Q M G + ++ Y I G G + L
Sbjct: 399 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLY 458
Query: 482 KEMFENQV 489
++M +N V
Sbjct: 459 QKMMQNNV 466
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N ++ G +R G +V+ EM P+ +Y+ ++ + + +L
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M ++ + + YN ++ G C G M EM + T+ L +G R
Sbjct: 73 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GD + + ++ + G T +L+ LC +V A ++L++ +V GL PT
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS-LVNAGLVPTRV 191
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G C+ G++E A +M + +P Y+A I+G K + A L EM
Sbjct: 192 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 251
Query: 485 FENQVR 490
+N V
Sbjct: 252 QDNGVN 257
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 110/251 (43%), Gaps = 7/251 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN T+N ++ G + G E + +M G +P+ +Y+VL++ C RM E
Sbjct: 46 VLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETS 105
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM + + D Y+ + G G+ F + +GV T L+NG
Sbjct: 106 ALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGL 165
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV---FEALDILKARVVKFGL 419
C+ G V A V + G P LI C + F +K+R +K
Sbjct: 166 CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIK--- 222
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI GLC+ ++ A + EM G P++E ++ ID Y + G +E +
Sbjct: 223 -PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFI 281
Query: 480 LRKEMFENQVR 490
+ EM EN ++
Sbjct: 282 VLSEMQENGLK 292
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 132/288 (45%), Gaps = 8/288 (2%)
Query: 195 KVSTCNALIWEVSRGKGVISG--YEIYREVFGLDSDATAGI---GKDVKRVVRVRPNVHT 249
++ +AL+ E++ K V G Y I + + D+ A + GK +K V + +T
Sbjct: 100 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGD--YT 157
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ G ++G E+V + G P Y+ L+ +C+ + A + +M+
Sbjct: 158 CSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK 217
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
++++ D + YN +I G C+ + A++ EM +GV + TF L++ Y R G ++
Sbjct: 218 SRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE 277
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+V ++M G +P + ++ C ++ EA+ IL K + P + Y +
Sbjct: 278 KCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPNAQVYNAI 336
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
I E G ++A + +M G PS+ Y+ I G + + A
Sbjct: 337 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 384
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 110/206 (53%), Gaps = 2/206 (0%)
Query: 273 MARLGCEP-DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
M R G P + +SY+V++A R +A ++++EM ++ V + + YNT+I G + G
Sbjct: 5 MGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGG 64
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
++ +M G++ +++T+ L++G CRAG + + ++M + P+G T
Sbjct: 65 DLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYS 124
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+L L + +A+ L + +K G+ + + L+ GLC++GK+ A +V +V
Sbjct: 125 ILFDGLS-RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN 183
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P+ IY+ I+GY + G +E A
Sbjct: 184 AGLVPTRVIYNTLINGYCQTGELEGA 209
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/340 (19%), Positives = 128/340 (37%), Gaps = 78/340 (22%)
Query: 61 LLSLCRSGLTPTQ--FSQIALGLKNNPHLALRFFSFTQHKSL-CKHSLSSYATIIHILSR 117
L SL +GL PT+ ++ + G L F +F Q KS K +Y +I+ L +
Sbjct: 178 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 237
Query: 118 ARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKI 177
A I A+D++ + ++ +P ++ F L+ Y G ++
Sbjct: 238 AERITNAQDLL-MEMQDNGVNPTVETFNTLIDAYGRTG--------------------QL 276
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDS---------- 227
E C ++ + GL V + +++ + + I ++F D
Sbjct: 277 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 336
Query: 228 -DATAGIGKDVKRVVRVR--------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
DA G + + + V P++ T+N L+ G + + E++ ++
Sbjct: 337 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL 396
Query: 279 EPDCYSYSVLMAVFC-----------EER------------------------RMREAEK 303
PD SY+ L++ C ++R R+ E E
Sbjct: 397 IPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEY 456
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
L+++M NV +N ++ + + G +AE+ +EM
Sbjct: 457 LYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 496
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 124/243 (51%), Gaps = 1/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEERRMREAEK 303
P+ T N L+ G R + +V + R G C P+ +++ +++ +C+ ++ +A
Sbjct: 115 PDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMA 174
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ +M + + V YN +I G+ ++G++ A E +++M VTF L++GYC
Sbjct: 175 VYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYC 234
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G +D A+ +++DM + +P T ++I LC + R EA+ +L ++ + P
Sbjct: 235 RCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQA 294
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
Y +I LC+ GK++EA ++ M KG P Y+ I GY + + A M E
Sbjct: 295 FIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHE 354
Query: 484 MFE 486
M E
Sbjct: 355 MVE 357
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 128/250 (51%), Gaps = 3/250 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM-REAEK 303
P+V +FN ++ G R G +K ++ M GC PD ++++L+ C + R E
Sbjct: 80 PDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEV 139
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L RD +VV + ++I G+C+ G++ A + +M SG+ ++VT+ L+NGY
Sbjct: 140 LRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYG 199
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ GD+ SA+ VY M R P+ T LI C ++ +AL I + + + + P
Sbjct: 200 KVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIW-SDMAQHRIQPNV 258
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEM-VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ +I LC++ + +EA+ + E+ + P IY+ ID K G V+ A ++RK
Sbjct: 259 YTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRK 318
Query: 483 EMFENQVRQE 492
M E R +
Sbjct: 319 GMEEKGCRPD 328
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 121/234 (51%), Gaps = 4/234 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN T+N+LM G ++ K + +M + G P+ +Y+ L+ C+E A +
Sbjct: 379 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFR 438
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+E M ++ D AY + C+ G RAEE + + GV + V + L++G+
Sbjct: 439 LFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDGFS 495
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+AG+ D A + M +G P+ T VL+ LC ++R+ EAL IL ++ G+ T
Sbjct: 496 KAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR-GIKCTI 554
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI + EGK + A ++ EM G +PS Y+ FI+ Y KEG +E A
Sbjct: 555 FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDA 608
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 127/245 (51%), Gaps = 2/245 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P T NAL++G+ R G K +++ M +GC+ + YSY++L+ C+ + +R+A
Sbjct: 99 LEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKAL 158
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ M+ +V A+ +I G C+ G + A F M +GV S +T+ ++ GY
Sbjct: 159 VLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGY 218
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G ++ A+ + M + G P+ T LI LCD++ E + L VK G PT
Sbjct: 219 SKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKT--EEAEELLNNAVKEGFTPT 276
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ LI G C K ++AL+++ +M+ + L+++ I+ +K+ ++ A L
Sbjct: 277 VVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLN 336
Query: 483 EMFEN 487
E+ N
Sbjct: 337 EISAN 341
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 116/266 (43%), Gaps = 50/266 (18%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ GF + G + + M GC PD Y+YSVL+ C+++R+ EA + ++M
Sbjct: 487 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 546
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ ++ + AY +I G+ A+ + EM SG + S+ T+ +N YC+ G ++
Sbjct: 547 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 606
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLI---GELCDKRRVFEA-------------------- 406
A + M R+G P+ T +LI G + R F
Sbjct: 607 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 666
Query: 407 ------------------------LDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
LDI L R+VK GL PT +Y LI G C+ G++
Sbjct: 667 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 726
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFI 465
EEA + M GKG P+ +IY+ I
Sbjct: 727 EEACLLLDHMCGKGLSPNEDIYTLLI 752
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 121/270 (44%), Gaps = 37/270 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+NA++VG+ + G + M + GC PD ++Y+ L+ C+++ EAE
Sbjct: 204 VVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKT-EEAE 262
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFC---------------------------------- 328
+L + VV + +I G+C
Sbjct: 263 ELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSL 322
Query: 329 -EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
+ + A+E E+ +G+ + +T+ +++GYC++G VD A+ V M R G +P
Sbjct: 323 IKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNA 382
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T L+ L +++ +A+ +L ++ K G+ P +Y L++G C+E + A ++
Sbjct: 383 WTYNSLMYGLVKDKKLHKAMALL-TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFE 441
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
M G +P Y+ D K G E A
Sbjct: 442 MMEQNGLKPDEHAYAVLTDALCKAGRAEEA 471
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 115/221 (52%), Gaps = 5/221 (2%)
Query: 274 ARLGCEPDCYSYSVL-MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
ARL P CY++++ +A F M +++ ++ + D V YNT+I +C+ G+
Sbjct: 27 ARLALSPKCYNFALRSLARFDMTEYM---GRVYSQLVQDGLLPDTVTYNTMIKSYCKEGD 83
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A +FR + G+E + T LV GYCR G++ A ++ M G + + +
Sbjct: 84 LTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTI 143
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI LCD + V +AL +L + + G P +++ FLI GLC+ G++ +A + M
Sbjct: 144 LIQGLCDAKCVRKAL-VLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQN 202
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
G PS+ Y+A I GY K G + A +++ M +N +D
Sbjct: 203 GVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDD 243
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 17/260 (6%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ + + L+ REG + + ++ EM G +P +Y+V + +C+E R+ +AE
Sbjct: 550 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 609
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF----EHL 358
L +M + V DVV YN +I G +G + RA + M + E + T+ +HL
Sbjct: 610 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 669
Query: 359 VNG---YCRAGD---------VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
+ G Y R+ D +D + M + G P +T LI C R+ EA
Sbjct: 670 LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 729
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+L K GL P E Y LIK C+ E+AL + M GF+P LE Y +
Sbjct: 730 CLLLDHMCGK-GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVV 788
Query: 467 GYMKEGNVEMATMLRKEMFE 486
G EG+ E L ++ E
Sbjct: 789 GLCNEGDFEKVKSLFCDLLE 808
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 128/265 (48%), Gaps = 4/265 (1%)
Query: 228 DATAGIGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
D T +G+ ++V+ + P+ T+N ++ + +EG + + G EP+ ++
Sbjct: 47 DMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTC 106
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ L+ +C +R+A L+ M + + +Y +I G C+ + +A F M
Sbjct: 107 NALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKR 166
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G + F L++G C++G V A L+++ M + G P T +I R+ +
Sbjct: 167 DGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMND 226
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
AL I K + K G P + +Y LI GLC++ K EEA ++ V +GF P++ ++ I
Sbjct: 227 ALKI-KELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLI 284
Query: 466 DGYMKEGNVEMATMLRKEMFENQVR 490
+GY + A ++ +M ++ +
Sbjct: 285 NGYCMAEKFDDALRMKNKMMSSKCK 309
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 121/265 (45%), Gaps = 8/265 (3%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
+DA I + + + P + F + R E + V+ ++ + G PD +Y+
Sbjct: 15 ADAIQAIRRTGSARLALSPKCYNFA--LRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYN 72
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ +C+E + A + + + + +E + N ++ G+C GE+ +A F M L
Sbjct: 73 TMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLM 132
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G + + ++ L+ G C A V A++++ M R G P LI LC RV +A
Sbjct: 133 GCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 192
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ A + + G+ P+ +Y +I G + G+M +ALK++ M G P Y+ I
Sbjct: 193 RLLFDA-MPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY 251
Query: 467 GYMKEGNVEMATMLRKEMFENQVRQ 491
G + E +E+ N V++
Sbjct: 252 GLCDQKTEE-----AEELLNNAVKE 271
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 120/306 (39%), Gaps = 66/306 (21%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P V TF L+ G+ F+ + +M C+ D + L+ ++ R++EA++L
Sbjct: 275 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 334
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS------------ 352
E+ + +V+ Y +II G+C+ G++ A E + M G + ++
Sbjct: 335 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 394
Query: 353 -----------------------VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
+T+ L+ G C D D+A ++ M + G +P+
Sbjct: 395 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 454
Query: 390 IEVLIGELCDKRRVFEALDI-------------------------------LKARVVKFG 418
VL LC R EA L R++ G
Sbjct: 455 YAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 514
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
P +Y L+ LC++ ++ EAL + +M +G + ++ Y+ ID ++EG + A
Sbjct: 515 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 574
Query: 479 MLRKEM 484
+ EM
Sbjct: 575 RMYNEM 580
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 237 VKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
++R+V+ + P V T+++L+ GF + G E+ + M G P+ Y++L+ C+
Sbjct: 698 LERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCD 757
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ +A M + + + +Y ++ G C G+ + + F ++ G V
Sbjct: 758 TKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVA 817
Query: 355 FEHLVNGYCRAGDVD 369
++ L +G +AG VD
Sbjct: 818 WKILNDGLLKAGYVD 832
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 3/144 (2%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M + G P +YS L+A FC+ R+ EA L + M K + + Y +I C+
Sbjct: 701 MVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKF 760
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+A F M G + ++ LV G C GD + ++ D+ G+ + ++
Sbjct: 761 FEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKI 820
Query: 393 LIGELCDKRRV---FEALDILKAR 413
L L V F+ L I++ R
Sbjct: 821 LNDGLLKAGYVDICFQMLSIMEKR 844
>gi|357493977|ref|XP_003617277.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518612|gb|AET00236.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 502
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 147/286 (51%), Gaps = 26/286 (9%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
VFDLLI+ ++ + K+ + ++L RG V ++ CNAL+ + + + +S E
Sbjct: 79 VFDLLIRTYVQAR---KLREGFEAFQLLRKRGFCVSINACNALLGSIVKVRVYLSEME-- 133
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
K +K P + T+NAL+ G +EG +E + V +M +G
Sbjct: 134 --------------AKGLK------PGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFC 173
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +++ ++ + + EAE+++ EM V D++++++IIG F GE+ RA +
Sbjct: 174 PDAATFNPVLVESFRKEDVWEAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAY 233
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F +M G+ +V + L+NGYCR DV A+ V N+M + + T L+ LC
Sbjct: 234 FEKMKGVGLVPDTVIYTILINGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNGLCR 293
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+ + +A ++ K +V+ G+FP + LI G C++G M +AL +
Sbjct: 294 GKMLDDADELFK-EMVERGVFPDFYTLTTLIHGYCKDGNMTKALSL 338
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 40/239 (16%)
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
+ +L+ + + R++RE + ++ +R + + A N ++G + + + EM
Sbjct: 80 FDLLIRTYVQARKLREGFEAFQLLRKRGFCVSINACNALLG------SIVKVRVYLSEME 133
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G++ T+ L+NG C+ G +SA V + M GF P+ +T ++ E K V+
Sbjct: 134 AKGLKPGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVLVESFRKEDVW 193
Query: 405 EA----LDILKARVVK------------------------------FGLFPTEKSYMFLI 430
EA ++L+ VV GL P Y LI
Sbjct: 194 EAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILI 253
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G C + ALKV+ EMV + + Y+ ++G + ++ A L KEM E V
Sbjct: 254 NGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGV 312
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 21/135 (15%)
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
+L+ G+ R G K D M G PDC +Y+ L+
Sbjct: 386 SLIKGYLRAGNVSKANDFLNTMVSEGVPPDCITYNTLI---------------------N 424
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
+ D+V YN I+GGF G M AE +M G+ T+ ++NGY ++ A
Sbjct: 425 RLLPDLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSVINGYVSKDNMKEA 484
Query: 372 ILVYNDMCRKGFEPE 386
V+++M ++GF P+
Sbjct: 485 FRVHDEMLQRGFVPD 499
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ P++ T+NA++ GF R G ++ E V +M G PD +Y+ ++ + + M+EA
Sbjct: 425 RLLPDLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSVINGYVSKDNMKEA 484
Query: 302 EKLWEEMRDKNVEHD 316
++ +EM + D
Sbjct: 485 FRVHDEMLQRGFVPD 499
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 125/250 (50%), Gaps = 1/250 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEERRMREAEK 303
P+ T N L+ G R K +V + R G C P+ +Y+ +++ +C+ RM++A
Sbjct: 115 PDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFS 174
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ +M + V YN +I G+ + +M A + ++ L VTF L++GYC
Sbjct: 175 VYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYC 234
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G +D A+ ++ +M + +P T ++I LC + R EAL +L+ ++ + P
Sbjct: 235 RCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQT 294
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
Y +I LC+ GK++EA + +M KG P Y+ I G+ +G + A L +
Sbjct: 295 FIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAVTLFHK 354
Query: 484 MFENQVRQED 493
M E R ++
Sbjct: 355 MVETGCRPDN 364
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 113/248 (45%), Gaps = 3/248 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ F+ + G + ++ + + GC + Y+Y+ L+ R ++A L
Sbjct: 9 PDAGFFSFVAGSCTNAGLLDAAANLLTKGSWFGCRIEWYAYNNLLNTLIAHGRAQDAVAL 68
Query: 305 WEE-MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+E ++D DV ++N +I G C +G + +A E M G ++T LV+G C
Sbjct: 69 FESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVDGLC 128
Query: 364 RAGDVDSAILVYNDMCRKGF-EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
R V+ V + R G P T +I C R+ +A + +++ G P
Sbjct: 129 RVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYN-DMLQSGTRPN 187
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI G + ME A+++ +++ P + +++ IDGY + G ++ A +
Sbjct: 188 TVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWM 247
Query: 483 EMFENQVR 490
EM ++ ++
Sbjct: 248 EMGQHHIQ 255
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 125/245 (51%), Gaps = 1/245 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV T+ ++ F + + M +GC P+ +++ L+ F E+ ++ +A
Sbjct: 253 LQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDAL 312
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+W M D+ ++YN +I G C IG++ A +FF M + + ++ T+ LV+G+
Sbjct: 313 SMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGF 372
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
AGD+D A+L++N+M G +P +I LC K+ +F+ + L +++ P
Sbjct: 373 SNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLC-KKMMFDQAESLIDKMLMDNCPPN 431
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ LI LC+ G++ AL V M G P+ Y+ + G +EGN + A +
Sbjct: 432 TVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVI 491
Query: 483 EMFEN 487
EM N
Sbjct: 492 EMLNN 496
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 120/245 (48%), Gaps = 6/245 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P V +N L+ RE V V+ M + G +P+ Y+Y++L+ C+ R+ A K+
Sbjct: 120 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EM K D V++ TI+ G C++G + A F E V++S H + G R
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET--VPVQASYNAVVHALCGEFR 237
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+V S V N+M ++G +P T ++ C R + A IL AR+V G P
Sbjct: 238 MWEVFS---VVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAIL-ARMVSMGCTPNVL 293
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ L+KG E+GK+ +AL + MV +G+ PS Y+ I G G+++ A M
Sbjct: 294 TFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM 353
Query: 485 FENQV 489
N +
Sbjct: 354 KRNAL 358
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 2/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T++ L+ GF G + +W EM GC+P+ Y+ ++ V C++ +AE L
Sbjct: 360 PNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESL 419
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M N + V +NT+IG C+ G + RA F M +G + T+ L++G R
Sbjct: 420 IDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFR 479
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ A + +M GFE T +I LC A+ +L R++ G+ P
Sbjct: 480 EGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAM-LLLGRMMVQGIQPDAF 538
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM-LRKE 483
++ +I C+EGK+ A + +M ++ Y+ I +G + A + L K
Sbjct: 539 TFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKM 598
Query: 484 MFE 486
++E
Sbjct: 599 LYE 601
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 32/283 (11%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D R V PNV+T+N L+ + + + EM+R GC PD S+ +++ C+
Sbjct: 146 DNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKL 205
Query: 296 RRMREAE------------------------KLWE------EMRDKNVEHDVVAYNTIIG 325
R+ EA ++WE EM + ++ +VV Y TI+
Sbjct: 206 GRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVD 265
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
FC+ E+ A M G + +TF LV G+ G V A+ +++ M +G+ P
Sbjct: 266 AFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAP 325
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+ VLI LC + ALD + + + L P +Y L+ G G ++ A+ +
Sbjct: 326 STISYNVLIRGLCCIGDLKGALDFFNS-MKRNALLPNATTYSTLVDGFSNAGDLDGAMLI 384
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA-TMLRKEMFEN 487
EM G +P++ +Y+ ID K+ + A +++ K + +N
Sbjct: 385 WNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 427
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N L+ G +REG + + +EM G E +Y+ ++ C+ + A L
Sbjct: 465 PNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLL 524
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M + ++ D +N II +C+ G+++ A +M + V + L++ C
Sbjct: 525 LGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCN 584
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
G + +A++ M +G P +T VL+
Sbjct: 585 QGKLSNAMVYLLKMLYEGICPNEATWNVLV 614
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 82/220 (37%), Gaps = 67/220 (30%)
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA------------------- 371
G++ + +EM L GV + + + RAG D A
Sbjct: 65 GDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRV 124
Query: 372 -----------------ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ VY++M + G +P T +LI LC RV A +L +
Sbjct: 125 YNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLD-EM 183
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEA-------LKVQA-------------------- 447
+ G P E S+ ++ G+C+ G++EEA + VQA
Sbjct: 184 SRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFS 243
Query: 448 ---EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
EMV +G +P++ Y+ +D + K + MA + M
Sbjct: 244 VVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARM 283
>gi|326494726|dbj|BAJ94482.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 190/428 (44%), Gaps = 31/428 (7%)
Query: 61 LLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARL 120
LLSL R+ +P+ + KN A FF ++ S HSL SY ++H+L+RA L
Sbjct: 70 LLSLARNP-SPSSPASAETVAKN----AHSFFHWSAAASPSPHSLRSYCLLVHLLARAAL 124
Query: 121 IGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEK-I 177
I A +++ A+ + P + Y + G+A LL+ +++ E+ +
Sbjct: 125 ISHASVLLQAAITRHSSSPASSFLDAFFSAYEDSGTAATTRGLHLLVHAYAQLRLPEEAL 184
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
E C R L R + +S NA++ R + + EVF L + +
Sbjct: 185 EAC----RYLALRRVLPSLSAFNAVLHAAQR----TVRFRVAWEVFELMT---------L 227
Query: 238 KRVVRVRPNVHTFNALMVG-FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
KRV + V L+VG REGA + + + C P ++ L EE
Sbjct: 228 KRVYASQSTVE----LVVGVLSREGALARTAALVERIHGKKCAPGVVAHVALALWIFEEG 283
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
R + L M +N+ D VAY+ ++ C IG++ A E + +M G + +
Sbjct: 284 RTEKGILLLRRMLQRNMVFDDVAYSLMVHAHCRIGDLESAREQWDDMVRRGCRLNPFVYT 343
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
LV +CR G+V A+ + +M +G +P +T L+ R E L+ +++
Sbjct: 344 CLVGVHCREGNVSEAMQLLQEMLSRGLKPYDATYSHLVTGCFRHERTGEGLEYFD-KMLH 402
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
GL P + +++ +C G++ +A ++ M+ KG P + Y IDG+ K G+VE
Sbjct: 403 EGLVPDIGTCNEILEAMCGAGEVGKANELVTAMIDKGIIPGQDTYRKLIDGFGKVGDVEG 462
Query: 477 ATMLRKEM 484
+ EM
Sbjct: 463 VVKIYYEM 470
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 87/208 (41%), Gaps = 1/208 (0%)
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
+L+ + + R EA + + + V + A+N ++ A E F M L
Sbjct: 169 LLVHAYAQLRLPEEALEACRYLALRRVLPSLSAFNAVLHAAQRTVRFRVAWEVFELMTLK 228
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
V +S T E +V R G + + + K P L + ++ R +
Sbjct: 229 RVYASQSTVELVVGVLSREGALARTAALVERIHGKKCAPGVVAHVALALWIFEEGRTEKG 288
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ +L+ R+++ + + +Y ++ C G +E A + +MV +G + +Y+ +
Sbjct: 289 ILLLR-RMLQRNMVFDDVAYSLMVHAHCRIGDLESAREQWDDMVRRGCRLNPFVYTCLVG 347
Query: 467 GYMKEGNVEMATMLRKEMFENQVRQEDG 494
+ +EGNV A L +EM ++ D
Sbjct: 348 VHCREGNVSEAMQLLQEMLSRGLKPYDA 375
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 150/314 (47%), Gaps = 35/314 (11%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
I K E +++R +MS+G ST + +I + V +++++E+ GI
Sbjct: 200 IGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEM------KRNGI 253
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
P+V+ + L+ F + G E+ + + EM R GC P+ +Y+ L+ +
Sbjct: 254 A----------PDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYL 303
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ R++ +A +++E M K ++V Y +I G C+ G++ +A + ++ M VE V
Sbjct: 304 KSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDV 363
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
V VD A EP T L+ LC +V EA D+LK+
Sbjct: 364 DMHFRV--------VDGA----------SNEPNVFTYGALVDGLCKAYQVKEARDLLKSM 405
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
V+ G P Y LI G C+ GK++EA +V M+ G++P++ YS+ ID K+
Sbjct: 406 SVE-GCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKR 464
Query: 474 VEMATMLRKEMFEN 487
+++A + +M EN
Sbjct: 465 LDLALKVLSKMLEN 478
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 6/254 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR-----MR 299
P+ FN+L+ + R G + + +M + GC+P Y++L+ C +
Sbjct: 110 PSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLD 169
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
AEK + EM + V + V + C IG+ +A REM G + T+ ++
Sbjct: 170 LAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVI 229
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
C A V+ A ++ +M R G P+ LI C + +A + + + G
Sbjct: 230 GYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFD-EMERDGC 288
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI + K+ +A +V M+ KG P++ Y+A IDG K G +E A+
Sbjct: 289 APNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQ 348
Query: 480 LRKEMFENQVRQED 493
+ K M + V D
Sbjct: 349 IYKIMKKENVEIPD 362
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 171/388 (44%), Gaps = 31/388 (7%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGS---A 157
C ++ +Y +IH ++R + A +V + L S P + + L+ + G A
Sbjct: 288 CAPNVVTYTALIHAYLKSRKVSKANEVYEMML-SKGCTPNIVTYTALIDGLCKAGKIEKA 346
Query: 158 PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
++ ++ K +E+ +++ VD V T AL+ G+ Y+
Sbjct: 347 SQIYKIMKKENVEIPDVDMHFRVVD------GASNEPNVFTYGALV------DGLCKAYQ 394
Query: 218 IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
+ L S + G PN ++AL+ G + G ++ ++V+ M G
Sbjct: 395 VKEARDLLKSMSVEG----------CEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECG 444
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
+P+ Y+YS L+ +++R+ A K+ +M + + +VV Y +I G C++G+ A
Sbjct: 445 YDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 504
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+ M G + VT+ +++G+ ++G V+ + + M KG P T VLI
Sbjct: 505 KLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHC 564
Query: 398 CDKRRVFEALDILKARVVKFGLFPTE-KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
C + EA +L+ +K +P Y +I+G E +L + E+ P
Sbjct: 565 CSTGLLDEAHKLLEE--MKQTYWPRHVAGYRKVIEGFNRE--FIASLYLSFEISENDSVP 620
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y ID ++K G +E+A L +E+
Sbjct: 621 VAPVYRVLIDNFIKAGRLEIALELNEEL 648
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 109/281 (38%), Gaps = 41/281 (14%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA-------------- 290
P+ + ++ G FE+ D M C P+ +Y +L+
Sbjct: 40 PDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRI 99
Query: 291 ---------------------VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+C A KL ++M + V YN +IGG C
Sbjct: 100 LSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICS 159
Query: 330 IGEMAR-----AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
E + AE+ + EM +GV + V + C G + A V +M KGF
Sbjct: 160 SEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFI 219
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P+ ST +IG LC+ +V +A + + + + G+ P Y LI C+ G +E+A
Sbjct: 220 PDTSTYSKVIGYLCNASKVEKAFQLFQ-EMKRNGIAPDVYVYTTLIDSFCKAGFIEQARN 278
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
EM G P++ Y+A I Y+K V A + + M
Sbjct: 279 WFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMML 319
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 4/214 (1%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD Y+ +++ CE EA MR + +V+ Y ++ G ++ R +
Sbjct: 40 PDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRI 99
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
M G S F LV+ YCR+GD A + M + G +P +LIG +C
Sbjct: 100 LSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICS 159
Query: 400 K----RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
+ V + + +++ G+ + + + LC GK E+A V EM+ KGF
Sbjct: 160 SEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFI 219
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
P YS I VE A L +EM N +
Sbjct: 220 PDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGI 253
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 36/271 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV+T+++L+ +++ + V +M C P+ Y+ ++ C+ + EA KL
Sbjct: 447 PNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 506
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M +K +VV Y +I GF + G + + E ++M G + VT+ L+N C
Sbjct: 507 MVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCS 566
Query: 365 AGDVDSAILVYNDMCR--------------KGFE-------------------PEGSTIE 391
G +D A + +M + +GF P
Sbjct: 567 TGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYR 626
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLF--PTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
VLI R+ AL+ L + F F + ++ LI+ L K ++A ++ A+M
Sbjct: 627 VLIDNFIKAGRLEIALE-LNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADM 685
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+ +G P L I I G ++ E A L
Sbjct: 686 ISRGSIPELSILVHLIKGLLRVNRWEEALQL 716
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 162/358 (45%), Gaps = 22/358 (6%)
Query: 138 DPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
D K+ + E ++++ G P +++ LI + ++E + SR +
Sbjct: 349 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG---ELEGAFSTFGQMKSRHIKPD 405
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
T NALI + + + + + ++ E+ + V P V TFN L+
Sbjct: 406 HITYNALINGLCKAERITNAQDLLMEM----------------QDNGVNPTVETFNTLID 449
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
+ R G EK V EM G +P+ SY ++ FC+ ++ EA + ++M K+V
Sbjct: 450 AYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 509
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
+ YN II + E G +A +M +G+ S VT+ L+ G C + A +
Sbjct: 510 NAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEII 569
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
N + P+ + LI C + + +ALD L+ R+ K+G+ T ++Y LI GL
Sbjct: 570 NSLSNHRLIPDAVSYNTLISACCYRGNIDKALD-LQQRMHKYGIKSTVRTYHQLISGLGG 628
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
G++ E + +M+ PS I++ ++ Y K GN A LRKEM + + +D
Sbjct: 629 AGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 686
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 132/288 (45%), Gaps = 8/288 (2%)
Query: 195 KVSTCNALIWEVSRGKGVISG--YEIYREVFGLDSDATAGI---GKDVKRVVRVRPNVHT 249
++ +AL+ E++ K V G Y I + + D+ A + GK +K V + +T
Sbjct: 281 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGD--YT 338
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ G ++G E+V + G P Y+ L+ +C+ + A + +M+
Sbjct: 339 CSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK 398
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
++++ D + YN +I G C+ + A++ EM +GV + TF L++ Y R G ++
Sbjct: 399 SRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE 458
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+V ++M G +P + ++ C ++ EA+ IL K + P + Y +
Sbjct: 459 KCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPNAQVYNAI 517
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
I E G ++A + +M G PS+ Y+ I G + + A
Sbjct: 518 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 565
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 115/269 (42%), Gaps = 13/269 (4%)
Query: 231 AGIGKDVKRVV------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
AG G D V V PN T+N ++ G + G E + +M G +P+ +
Sbjct: 209 AGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAIT 268
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+VL++ C RM E L +EM + + D Y+ + G G+ F +
Sbjct: 269 YNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSL 328
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV- 403
+GV T L+NG C+ G V A V + G P LI C +
Sbjct: 329 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 388
Query: 404 --FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
F +K+R +K P +Y LI GLC+ ++ A + EM G P++E +
Sbjct: 389 GAFSTFGQMKSRHIK----PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 444
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+ ID Y + G +E ++ EM EN ++
Sbjct: 445 NTLIDAYGRTGQLEKCFIVLSEMQENGLK 473
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N ++ G +R G +V+ EM P+ +Y+ ++ + + L
Sbjct: 194 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSL 253
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M ++ + + YN ++ G C G M EM + T+ L +G R
Sbjct: 254 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 313
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GD + + ++ + G T +L+ LC +V A ++L++ +V GL PT
Sbjct: 314 NGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS-LVNAGLVPTRV 372
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G C+ G++E A +M + +P Y+A I+G K + A L EM
Sbjct: 373 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 432
Query: 485 FENQVR 490
+N V
Sbjct: 433 QDNGVN 438
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 129/264 (48%), Gaps = 8/264 (3%)
Query: 236 DVKRVVRV------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP-DCYSYSVL 288
DV+R + RP+ +N + G + + M R G P + +SY+V+
Sbjct: 143 DVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVV 202
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+A R +A ++++EM ++ V + + YNT+I G + G++ +M G+
Sbjct: 203 IAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGL 262
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+ +++T+ L++G CRAG + + ++M + P+G T +L L + +A+
Sbjct: 263 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL-SRNGDSKAML 321
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
L + +K G+ + + L+ GLC++GK+ A +V +V G P+ IY+ I+GY
Sbjct: 322 SLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 381
Query: 469 MKEGNVEMATMLRKEMFENQVRQE 492
+ G +E A +M ++ +
Sbjct: 382 CQTGELEGAFSTFGQMKSRHIKPD 405
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 133/244 (54%), Gaps = 2/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ F AL+ G + G E+ +V++EM+ +G P+ ++Y+ L+ C+ R+ EA
Sbjct: 558 IYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEAL 617
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL +EMR K + D +N II GFC G+M A E F +M G+ TF L+ GY
Sbjct: 618 KLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGY 677
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A D+ A + N M G +P+ +T + C R++ +A+ IL +++ G+ P
Sbjct: 678 CKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILD-QLISAGIVPD 736
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y ++ G+C + ++ A+ + A+++ GF P++ + + + K+G E A + +
Sbjct: 737 TVTYNTMLSGICSD-ILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQ 795
Query: 483 EMFE 486
++ E
Sbjct: 796 KLRE 799
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 153/333 (45%), Gaps = 24/333 (7%)
Query: 154 CGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
C F++LI CC+ + +D + +++ G+ V+T ++ + R V
Sbjct: 278 CSPDVVTFNILINACCIG----GRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNV 333
Query: 213 ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
+ +++ D +G + PN +N LM G+++ + ++ E
Sbjct: 334 VEARKLF--------DGIQDMG--------IAPNAAIYNTLMDGYFKAREVAQASLLYEE 377
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M G PDC ++++L+ + R+ ++++L +++ + D Y+ ++ C G
Sbjct: 378 MRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGR 437
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A + +E+ G+ S V F L+ Y RAG D A Y M R GF P ST
Sbjct: 438 LDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNS 497
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEK-SYMFLIKGLCEEGKMEEALKVQAEMVG 451
L+ LC K + EA IL R+++ G FP K +Y L+ G + +E A + EM
Sbjct: 498 LLMGLCRKGWLQEA-RILLYRMLEKG-FPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKE 555
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+G P ++A IDG K GNVE A + EM
Sbjct: 556 RGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEM 588
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 124/250 (49%), Gaps = 7/250 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V TF ++ REG + ++ + +G P+ Y+ LM + + R + +A
Sbjct: 313 VEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQAS 372
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+EEMR V D V +N ++ G + G + ++ +++ +SG+ S ++ +V+
Sbjct: 373 LLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSL 432
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD---KRRVFEALDILKARVVKFGL 419
C AG +D A+ + ++ KG LIG + + FEA I+ V+ G
Sbjct: 433 CWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIM----VRCGF 488
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P+ + L+ GLC +G ++EA + M+ KGF + Y+ +DGY K N+E A
Sbjct: 489 TPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQF 548
Query: 480 LRKEMFENQV 489
L KEM E +
Sbjct: 549 LWKEMKERGI 558
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 196/448 (43%), Gaps = 43/448 (9%)
Query: 58 WNHLLSLCRSGLTPT--QFSQI--ALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIH 113
W HL+ RSG+ P+ F+ I AL + N A + F Q + ++ + Y T++
Sbjct: 304 WLHLM--VRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNA-AIYNTLMD 360
Query: 114 ILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECG----SAPFVFDLLIKCCL 169
+AR + A ++ +R+ P F +LV + + G S + DL++
Sbjct: 361 GYFKAREVAQA-SLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLF 419
Query: 170 EVKNIE-----------KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
++ +++ + +++ L+ +GL++ V N+LI SR +E
Sbjct: 420 LDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEA 479
Query: 219 YREVFGLDSDATAGIGKDV------------KRVVRVRP-------NVHTFNALMVGFYR 259
YR + ++ + R++ R N + L+ G+++
Sbjct: 480 YRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFK 539
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
E + +W EM G PD +++ L+ + + EA +++ EM + A
Sbjct: 540 MNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFA 599
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YN++I G C+ G + A + +EM G+ S + TF +++G+CR G + AI + DM
Sbjct: 600 YNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQ 659
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
R G P+ T +LIG C + A +I+ ++ GL P +Y + G C KM
Sbjct: 660 RIGLLPDIFTFNILIGGYCKAFDMVGAGEIVN-KMYSCGLDPDITTYNTYMHGYCRMRKM 718
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+A+ + +++ G P Y+ + G
Sbjct: 719 NQAVIILDQLISAGIVPDTVTYNTMLSG 746
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 1/241 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V FN+L+ + R G +K + + M R G P + + L+ C + ++EA L
Sbjct: 456 SVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILL 515
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M +K + VAY ++ G+ ++ + A+ ++EM G+ +V F L++G +A
Sbjct: 516 YRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKA 575
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G+V+ A V+ +M GF P LI LCD RV EAL + K K GL +
Sbjct: 576 GNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQK-GLLSDTFT 634
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+ +I G C G+M+ A++ +M G P + ++ I GY K ++ A + +M+
Sbjct: 635 FNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMY 694
Query: 486 E 486
Sbjct: 695 S 695
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 36/269 (13%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
R V VRP + + L+ R G + V ++ +M G P +++ ++ FC + R+
Sbjct: 204 RGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRV 263
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
E L M DVV +N +I C G A ++ M SGVE S TF +
Sbjct: 264 VVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTI 323
Query: 359 VNGYCRAGDV-----------------DSAI------------------LVYNDMCRKGF 383
++ CR G+V ++AI L+Y +M G
Sbjct: 324 LHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGV 383
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
P+ T +L+ R+ ++ +LK +V GLF Y ++ LC G+++EA+
Sbjct: 384 SPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVS-GLFLDSSLYDVMVSSLCWAGRLDEAM 442
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
K+ E++ KG S+ +++ I Y + G
Sbjct: 443 KLLQELLEKGLTLSVVAFNSLIGAYSRAG 471
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 99/240 (41%), Gaps = 3/240 (1%)
Query: 246 NVHTFNALMVGFYREG-AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
+ N L+ GF G FE +E V M +G P S ++L+ + KL
Sbjct: 176 DFSVLNTLLRGFLNVGMGFEALE-VLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKL 234
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++M K + +N +I GFC + E M VTF L+N C
Sbjct: 235 FKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCI 294
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G AI + M R G EP +T ++ LC + V EA + + G+ P
Sbjct: 295 GGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDG-IQDMGIAPNAA 353
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y L+ G + ++ +A + EM G P ++ + G+ K G +E + L K++
Sbjct: 354 IYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDL 413
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 36/206 (17%)
Query: 314 EHDVVAYNTIIGGFCEI-----------------------------------GEMARAEE 338
E D NT++ GF + G+ +
Sbjct: 174 ESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWK 233
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F++M G S++TF ++ G+CR V + + M + P+ T +LI C
Sbjct: 234 LFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACC 293
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
R + A+D L +V+ G+ P+ ++ ++ LC EG + EA K+ + G P+
Sbjct: 294 IGGRTWVAIDWLHL-MVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNA 352
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEM 484
IY+ +DGY K V A++L +EM
Sbjct: 353 AIYNTLMDGYFKAREVAQASLLYEEM 378
>gi|125584236|gb|EAZ25167.1| hypothetical protein OsJ_08968 [Oryza sativa Japonica Group]
Length = 566
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 187/411 (45%), Gaps = 45/411 (10%)
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF 144
PH ALR F + + + + +S A ++ L+++R+ AR V R+
Sbjct: 126 PHDALRVFDHMRAREVVPDAHASSA-LLTALAKSRMTATARKVFDQMTRA---------- 174
Query: 145 EVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
V + T+ V++ ++ CL+ + E+ ++ + + G+ + + N +I
Sbjct: 175 GVAMNTH--------VYNAMLHVCLKAGDAALAES---LMTRMDAAGVPLDRFSFNTVIA 223
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
R KG+ RE G+ DV T+N+L+ G +E +
Sbjct: 224 LYCR-KGMQYEAMCVRERM-----ENQGVKADVV----------TWNSLIHGLCKERRVK 267
Query: 265 KVEDV------WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ D+ EM +G P +Y+ ++ CE+ +M+E L EM ++ V+ D V
Sbjct: 268 EASDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHV 327
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
NT+I +C+ G+M A + R M SG++ T++ LV+G+C+A ++D A +M
Sbjct: 328 TCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEM 387
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
GF P S + ++ LC+K L I ++K G P + Y LI+ LC++G
Sbjct: 388 MGAGFSPNYSVLSWIVDGLCNKNNAVAVLAI-PDELMKRGFPPDKAVYRSLIRRLCKKGF 446
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ A V EM GKG E +Y+ Y+ G A + EM + Q+
Sbjct: 447 IDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAKKQL 497
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 40/237 (16%)
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVA---------------------------------- 319
+ R +A ++++ MR + V D A
Sbjct: 122 QSARPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTH 181
Query: 320 -YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
YN ++ + G+ A AE M +GV +F ++ YCR G A+ V M
Sbjct: 182 VYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERM 241
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDI-----LKARVVKFGLFPTEKSYMFLIKGL 433
+G + + T LI LC +RRV EA D+ L+ + G+ P +Y +++ L
Sbjct: 242 ENQGVKADVVTWNSLIHGLCKERRVKEASDLEEAVKLRGEMEAMGMLPGVATYNAILRKL 301
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
CE+GKM+E + EM + + + I+ Y K G++ A +++ M E+ ++
Sbjct: 302 CEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQ 358
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 128/243 (52%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+V N T+ L+ + G + E V+ +M G E D + ++ +++ C+ M+ A
Sbjct: 280 KVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRA 339
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L++E+ ++ + + Y +I G C G++ AE EM G++ + V F L+NG
Sbjct: 340 FALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLING 399
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC+ G +D A+ + + M +KGFE + T + G LC R EA L V K G+ P
Sbjct: 400 YCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEK-GVDP 458
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
S+ +I C+EG + EA +V +M KG +P++ Y+ IDGY K+G ++ A L+
Sbjct: 459 NAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLK 518
Query: 482 KEM 484
EM
Sbjct: 519 DEM 521
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 126/249 (50%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
N HT+ AL+ G G + E + EM G + + ++ L+ +C++ + EA ++
Sbjct: 353 ANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRM 412
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M K E+D+ YNTI GG C++ A+ + M GV+ ++V+F +++ +C+
Sbjct: 413 QDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCK 472
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G++ A V+ DM +KG +P T LI K ++ EA LK + G+
Sbjct: 473 EGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYR-LKDEMESIGMTSDIY 531
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L+ G C GK+EEAL + E+ KG S+ Y+A I G KEG E A L EM
Sbjct: 532 TYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEM 591
Query: 485 FENQVRQED 493
+ +D
Sbjct: 592 MAAGLTPDD 600
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 36/220 (16%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ T+N + G + E+ + M G +P+ S+++++ + C+E + EAE+++
Sbjct: 424 DIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVF 483
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++M+ K + +VV YNT+I G+ + G++ A EM G+ S T+ LV+G C
Sbjct: 484 QDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVF 543
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G V+ A+ + N++CRKG A+ I+ +
Sbjct: 544 GKVEEALTLLNEVCRKGL----------------------AISIV--------------T 567
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
Y +I GL +EG+ EEA ++ EM+ G P +Y++ +
Sbjct: 568 YTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLV 607
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 11/225 (4%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
+M + YS ++++ C++ R+ A+ L EM K ++ +VV YNT++ + +I
Sbjct: 205 KMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIM 264
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ E R M + V ++ T+ L+ Y +G + A V+ M +G E +
Sbjct: 265 DFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFT 324
Query: 392 VLIGELC---DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
+I C + +R F D L R GL +Y LI G C G+++ A + E
Sbjct: 325 SIISWQCKLGNMKRAFALFDELNER----GLVANAHTYGALIHGTCNSGQLDAAEMLVNE 380
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVE----MATMLRKEMFENQV 489
M +G + +L I++ I+GY K+G ++ M ++ K+ FEN +
Sbjct: 381 MQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDI 425
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 117/233 (50%), Gaps = 1/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P V ++NA+M G F++ V++ M G PD YS+++ M FC+ R A +L
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M + E +VVAY T++GGF E A E F +M SGV TF L+ C+
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GDV + + + ++G P T + I LC + + A+ ++ +++ G P
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGC-LIEQGPKPDVI 287
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI GLC+ K +EA +MV +G EP Y+ I GY K G V++A
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 1/243 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+V T+N L+ G + F++ E +M G EPD Y+Y+ L+A +C+ ++ AE+
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ + D Y ++I G C GE RA F E G++ + + + L+ G
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G + A + N+M KG PE T +L+ LC V +A ++K + K G FP
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK-GYFPDI 461
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++ LI G + KME AL++ M+ G +P + Y++ ++G K E K
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 484 MFE 486
M E
Sbjct: 522 MVE 524
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 178/395 (45%), Gaps = 44/395 (11%)
Query: 67 SGLTPTQFSQIAL--GL--KNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIG 122
+G P QF+ +L GL + + AL F+ K + K ++ Y T+I LS +I
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI-KPNVILYNTLIKGLSNQGMIL 408
Query: 123 PARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVD 182
A + + P+++ F +LV + G +
Sbjct: 409 EAAQLAN-EMSEKGLIPEVQTFNILVNGLCKMGC--------------------VSDADG 447
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+V++++S+G + T N LI S + + EI DV
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL----------------DVMLDNG 491
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V+T+N+L+ G + FE V + + M GC P+ +++++L+ C R++ EA
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS-GVESSSVTFEHLVNG 361
L EEM++K+V D V + T+I GFC+ G++ A FR+M + V SS+ T+ +++
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ +V A ++ +M + P+G T +++ C V L +++ G P
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFL-LEMMENGFIP 670
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+ + +I LC E ++ EA + MV KG P
Sbjct: 671 SLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 192/447 (42%), Gaps = 44/447 (9%)
Query: 68 GLTPTQFSQIALGLKN-----NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIG 122
G+TP +S + +K+ PH ALR + + C+ ++ +Y T++
Sbjct: 141 GITPDVYS-FTIRMKSFCKTSRPHAALRLLNNMSSQG-CEMNVVAYCTVVGGFYEENFKA 198
Query: 123 PARDVIRVALRSPEN---DPKLKLFEVLVK--TYREC----------GSAP--FVFDLLI 165
++ L S + KL VL K +EC G P F ++L I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 166 KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGL 225
+ + +++ V +V L+ +G V T N LI+ + +
Sbjct: 259 QGLCQRG---ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF------------- 302
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
+A +GK V + P+ +T+N L+ G+ + G + E + + G PD ++Y
Sbjct: 303 -QEAEVYLGKMVNE--GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTY 359
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
L+ C E A L+ E K ++ +V+ YNT+I G G + A + EM
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G+ TF LVNG C+ G V A + M KG+ P+ T +LI + ++
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
AL+IL ++ G+ P +Y L+ GLC+ K E+ ++ MV KG P+L ++ +
Sbjct: 480 ALEILDV-MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 466 DGYMKEGNVEMATMLRKEMFENQVRQE 492
+ + ++ A L +EM V +
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPD 565
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 37/281 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV +N L+ G +G + + EM+ G P+ ++++L+ C+ + +A+
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L + M K D+ +N +I G+ +M A E M +GV+ T+ L+NG
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ + + Y M KG P T +L+ LC R++ EAL +L+ K + P
Sbjct: 507 CKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK-SVNPD 565
Query: 423 EKSYMFLIKGLCEEG----------KMEEALKVQA------------------------- 447
++ LI G C+ G KMEEA KV +
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 448 -EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
EMV + P Y +DG+ K GNV + EM EN
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN 666
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 4/224 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ TFN L+ G+ + E ++ M G +PD Y+Y+ L+ C+ + + +
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ M +K ++ +N ++ C ++ A EM V +VTF L++G+C+
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Query: 365 AGDVDSAILVYNDMCRKGFEPEGST--IEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
GD+D A ++ M + ++ ST ++I +K V A + + V + L P
Sbjct: 579 NGDLDGAYTLFRKM-EEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC-LGPD 636
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+Y ++ G C+ G + K EM+ GF PSL I+
Sbjct: 637 GYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVIN 680
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 155/338 (45%), Gaps = 30/338 (8%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSD---------- 228
V +++L ++G ++ CN ++ + V G E+ R++ FG + D
Sbjct: 163 VRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKG 222
Query: 229 -ATAGIGKDVKRV----VRVR------------PNVHTFNALMVGFYREGAFEKVEDVWV 271
A DV+ + VRV P++ + ++ G ++G E D+
Sbjct: 223 LCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILS 282
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
M G +P+ Y+ ++ C R EAE L EM ++ D V +N ++ FC+ G
Sbjct: 283 RMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNG 342
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ R E +M G +T+ ++NG+C+ G VD A+++ +M G +P +
Sbjct: 343 LVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYT 402
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+++ LC R +A +++ + +++ G P ++ LI +C++G E+A+++ +M+
Sbjct: 403 IVLKGLCRAERWVDAQELI-SHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLV 461
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G P L YS IDG K G E A L M +
Sbjct: 462 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGI 499
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV +N ++ G +E+ ED+ EM + C D ++++L+ FC+ +
Sbjct: 289 LKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVI 348
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L E+M + DV+ Y T+I GFC+ G + A + M G + +++++ ++ G
Sbjct: 349 ELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGL 408
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRA A + + M ++G P T LI +C K +A+++LK +V G P
Sbjct: 409 CRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVN-GCSPD 467
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY +I GL + GK EEAL++ M+ KG P+ IYS+ +EG + +
Sbjct: 468 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFD 527
Query: 483 EMFENQVRQE 492
+ + VR +
Sbjct: 528 SIQDATVRSD 537
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 113/243 (46%), Gaps = 7/243 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ ++ GF +EG ++ + M+ GC+P+ SY++++ C R +A++L
Sbjct: 361 PDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQEL 420
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M + + V +NT+I C+ G +A E ++M ++G +++ +++G +
Sbjct: 421 ISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 480
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR---VFEALDILKARVVKFGLFP 421
AG + A+ + N M KG P + L + R + + D ++ V+
Sbjct: 481 AGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVR----S 536
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y +I LC+ + + A+ A MV G P+ Y+ I G EG V A L
Sbjct: 537 DAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLL 596
Query: 482 KEM 484
E+
Sbjct: 597 SEL 599
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 99/209 (47%), Gaps = 1/209 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN ++ ++ G R + +++ M + GC P+ +++ L+ C++ +A +
Sbjct: 395 KPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIE 454
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L ++M D+++Y+T+I G + G+ A E M G+ +++ + + +
Sbjct: 455 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALS 514
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G D I +++ + + + +I LC + A+D A +V G P E
Sbjct: 515 REGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFF-AYMVSNGCMPNE 573
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
+Y LI+GL EG + EA + +E+ +
Sbjct: 574 STYTILIRGLASEGLVREAQDLLSELCSR 602
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 107/289 (37%), Gaps = 46/289 (15%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V PN +T+ ++ G V EM GC V++ C R
Sbjct: 102 VPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A + + + K D N ++ CE G + E R++ G E V++ ++
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221
Query: 361 GYC---RAGDVDSAIL-------VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
G C R DV+ ++ + M G P+ +I +C A DIL
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 281
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE---------------------- 448
+R+ +GL P Y ++KGLC + EEA + AE
Sbjct: 282 -SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQ 340
Query: 449 -------------MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
M+ G P + Y+ I+G+ KEG V+ A ML K M
Sbjct: 341 NGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM 389
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 46/241 (19%)
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE------------- 332
S L+ C R +A + + D VVAYN +I G+C G+
Sbjct: 48 SALIRSLCAAGRTADAARALDTAGDA---AGVVAYNAMIAGYCRAGQVAAARRLAAAVPV 104
Query: 333 -------------------MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
+A A EM L G ++ ++ CR G SA+
Sbjct: 105 PPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVR 164
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ KG + +++ +C++ V E +++L+ ++ FG P SY ++KGL
Sbjct: 165 ALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLR-KLPSFGCEPDIVSYNAVLKGL 223
Query: 434 CEEGKMEEALKVQAEMV----------GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
C + ++ ++ EMV G P L +Y+ IDG K+G+ E+A +
Sbjct: 224 CMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSR 283
Query: 484 M 484
M
Sbjct: 284 M 284
>gi|147856554|emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
Length = 642
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 185/420 (44%), Gaps = 27/420 (6%)
Query: 69 LTPTQFSQIALGLKN--NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARD 126
LT + ++ L LK + AL FF ++ +H ++SY IHIL A L+ A+
Sbjct: 66 LTESFVGRVLLELKKPIDAKQALGFFHWSAQCKNLEHGVASYCITIHILVGAHLLMDAQS 125
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
++ L+ + + + L+ +Y GS P VFDLL++ + E C D+
Sbjct: 126 LLESTLKKNAGS-RFLVVDSLLSSYNITGSNPRVFDLLVQ---SYSKLRMFEICFDVCCY 181
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVR-- 244
L G S+ + + N L+ V + SD + K + ++RVR
Sbjct: 182 LEEHGFSLSLISFNXLLHVVQK------------------SDNYPLVWKIYEHMIRVRKY 223
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN + + ++ +EGA +K D+ + C P + ++ EE R+ + +
Sbjct: 224 PNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLI 283
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + KN+ D ++Y+ I + G + A E + EM G ++ + + +C
Sbjct: 284 LKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCV 343
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G ++ A + DM G P T +LI R+ E L + + R+++ GL P+
Sbjct: 344 EGRIEEANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCE-RMMQRGLVPSCW 402
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ + LCE G ++ A ++ ++ KGF P YS I Y K G ++ L EM
Sbjct: 403 AFNLMAGKLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEM 462
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 127/293 (43%), Gaps = 25/293 (8%)
Query: 163 LLIKCCLEVKNIE--KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
+++ C+ + +E ++E + I++ L+ + + + + + + + + + S +E+Y
Sbjct: 261 VIVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYE 320
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
E+ PN + + EG E+ ++ +M G P
Sbjct: 321 EMLNRG----------------FHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMP 364
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
++++L+A + R+ E +L E M + + A+N + G CE G + RA+E
Sbjct: 365 YDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAGKLCESGVVKRADEML 424
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
+ G +T+ +L+ Y + G++ + +Y +M + P E +I LC
Sbjct: 425 TLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYRSLSPGLLVFESIIRSLCQC 484
Query: 401 RRVFEA---LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
R++ +A L I+K R + + Y LI G E+G A ++ EM+
Sbjct: 485 RKLEKAEKYLRIMKDRSIAI----STCVYETLISGYFEKGDELRASQLHNEML 533
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 123/251 (49%), Gaps = 1/251 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P V TFN L+ + R G EK V EM G +P+ SY ++ FC+ ++ EA
Sbjct: 304 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 363
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ ++M K+V + YN II + E G +A +M +G+ S VT+ L+ G
Sbjct: 364 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 423
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C + A + N + P+ + LI C + + +ALD L+ R+ K+G+ T
Sbjct: 424 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD-LQQRMHKYGIKST 482
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++Y LI GL G++ E + +M+ PS I++ ++ Y K GN A LRK
Sbjct: 483 VRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRK 542
Query: 483 EMFENQVRQED 493
EM + + +D
Sbjct: 543 EMLQKRNNHDD 553
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ T+NAL+ G + +D+ +EM G P +++ L+ + ++ +
Sbjct: 269 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 328
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EM++ ++ +VV+Y +I+ FC+ G++ A +M V ++ + +++ Y
Sbjct: 329 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 388
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G D A ++ M G P T +LI LC++ ++ EA +I+ + + L P
Sbjct: 389 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINS-LSNHRLIPD 447
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY LI C G +++AL +Q M G + ++ Y I G G + L +
Sbjct: 448 AVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQ 507
Query: 483 EMFENQV 489
+M +N V
Sbjct: 508 KMMQNNV 514
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++N ++ G +R G +V+ EM P+ +Y+ ++ + + +L
Sbjct: 61 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M ++ + + YN ++ G C G M EM + T+ L +G R
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GD + + ++ + G T +L+ LC +V A ++L++ +V GL PT
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS-LVNAGLVPTRV 239
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G C+ G++E A +M + +P Y+A I+G K + A L EM
Sbjct: 240 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 299
Query: 485 FENQVR 490
+N V
Sbjct: 300 QDNGVN 305
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 110/251 (43%), Gaps = 7/251 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN T+N ++ G + G E + +M G +P+ +Y+VL++ C RM E
Sbjct: 94 VLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETS 153
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM + + D Y+ + G G+ F + +GV T L+NG
Sbjct: 154 ALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGL 213
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV---FEALDILKARVVKFGL 419
C+ G V A V + G P LI C + F +K+R +K
Sbjct: 214 CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIK--- 270
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI GLC+ ++ A + EM G P++E ++ ID Y + G +E +
Sbjct: 271 -PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFI 329
Query: 480 LRKEMFENQVR 490
+ EM EN ++
Sbjct: 330 VLSEMQENGLK 340
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 132/288 (45%), Gaps = 8/288 (2%)
Query: 195 KVSTCNALIWEVSRGKGVISG--YEIYREVFGLDSDATAGI---GKDVKRVVRVRPNVHT 249
++ +AL+ E++ K V G Y I + + D+ A + GK +K V + +T
Sbjct: 148 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGD--YT 205
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ G ++G E+V + G P Y+ L+ +C+ + A + +M+
Sbjct: 206 CSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK 265
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
++++ D + YN +I G C+ + A++ EM +GV + TF L++ Y R G ++
Sbjct: 266 SRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE 325
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+V ++M G +P + ++ C ++ EA+ IL K + P + Y +
Sbjct: 326 KCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPNAQVYNAI 384
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
I E G ++A + +M G PS+ Y+ I G + + A
Sbjct: 385 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 432
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 124/249 (49%), Gaps = 8/249 (3%)
Query: 236 DVKRVVRV------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP-DCYSYSVL 288
DV+R + RP+ +N + G + + M R G P + +SY+V+
Sbjct: 10 DVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVV 69
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+A R +A ++++EM ++ V + + YNT+I G + G++ +M G+
Sbjct: 70 IAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGL 129
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+ +++T+ L++G CRAG + + ++M + P+G T +L L + +A+
Sbjct: 130 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL-SRNGDSKAML 188
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
L + +K G+ + + L+ GLC++GK+ A +V +V G P+ IY+ I+GY
Sbjct: 189 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 248
Query: 469 MKEGNVEMA 477
+ G +E A
Sbjct: 249 CQTGELEGA 257
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/340 (19%), Positives = 128/340 (37%), Gaps = 78/340 (22%)
Query: 61 LLSLCRSGLTPTQ--FSQIALGLKNNPHLALRFFSFTQHKSL-CKHSLSSYATIIHILSR 117
L SL +GL PT+ ++ + G L F +F Q KS K +Y +I+ L +
Sbjct: 226 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 285
Query: 118 ARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKI 177
A I A+D++ + ++ +P ++ F L+ Y G ++
Sbjct: 286 AERITNAQDLL-MEMQDNGVNPTVETFNTLIDAYGRTG--------------------QL 324
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDS---------- 227
E C ++ + GL V + +++ + + I ++F D
Sbjct: 325 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 384
Query: 228 -DATAGIGKDVKRVVRVR--------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
DA G + + + V P++ T+N L+ G + + E++ ++
Sbjct: 385 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL 444
Query: 279 EPDCYSYSVLMAVFC-----------EER------------------------RMREAEK 303
PD SY+ L++ C ++R R+ E E
Sbjct: 445 IPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEY 504
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
L+++M NV +N ++ + + G +AE+ +EM
Sbjct: 505 LYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 544
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 165/352 (46%), Gaps = 21/352 (5%)
Query: 152 RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
+ECG +P V L K I K+ + I +M+ G+ + T + LI + K
Sbjct: 441 KECGFSPSVISYGCLINLYTK-IGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKD 499
Query: 212 VISGYEIYREVF--GLDSDA-------TAGIG-KDVKRVV---------RVRPNVHTFNA 252
+ + ++ + GL D TA G ++ R + R RP TF
Sbjct: 500 WANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLP 559
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
++ GF R G + +++ M R GC P ++Y+ L+ E+R+M +A + ++M
Sbjct: 560 IIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAG 619
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
V + Y T++ G+ +G+ +A ++F + G+E T+E L+ C++G + SA+
Sbjct: 620 VGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSAL 679
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
V +M K +LI + V+EA D+++ ++ K G+ P +Y +
Sbjct: 680 AVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQ-QMRKEGVLPDIHTYTSFVNA 738
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
C+ G M++A ++ EM G +P+L+ Y+ I+G+ + E A +EM
Sbjct: 739 CCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEM 790
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 122/253 (48%), Gaps = 17/253 (6%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ ++ +M G+ G EK V+ + G P SY L+ ++ + ++ +A ++ +
Sbjct: 414 IDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISK 473
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M+ ++H++ Y+ +I GF ++ + A A F + G++ V + +++ +C
Sbjct: 474 MMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMS 533
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFEALDILKARVVKFGLF 420
++D AI + M ++ + P T +I GE+ RR E D+++ + G
Sbjct: 534 NMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEM---RRALEIFDMMR----RSGCI 586
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA--- 477
PT +Y LI GL E+ KM +A+ + +M G P+ Y+ + GY G+ E A
Sbjct: 587 PTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQY 646
Query: 478 -TMLRKEMFENQV 489
++LR E E V
Sbjct: 647 FSVLRNEGLEIDV 659
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 118/285 (41%), Gaps = 37/285 (12%)
Query: 242 RVRPNVHTFNALMVGFY-REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
R++ LMV +Y R G + M G EP + YS L+ + R M E
Sbjct: 268 RIKKPARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEE 327
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE---------------------------- 332
A +M+++ +E +V Y+ I+GGF ++G+
Sbjct: 328 ALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIY 387
Query: 333 -------MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
M RAE REM + G+++ + +++GY G+ + ++V++ + GF P
Sbjct: 388 AHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSP 447
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+ LI +V +AL I K + G+ K+Y LI G + A V
Sbjct: 448 SVISYGCLINLYTKIGKVSKALQISKMMKMS-GIKHNMKTYSMLINGFLKLKDWANAFSV 506
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+ G +P + +Y+ I + N++ A + K+M + + R
Sbjct: 507 FEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYR 551
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 147/308 (47%), Gaps = 20/308 (6%)
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG-------------LDSDAT 230
++ML ++ V + +I + +GK V Y +Y E+ +D+
Sbjct: 135 MQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCK 194
Query: 231 AGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
GK ++ V+PNV T+ A+M G+ K +++ M + G EP+ +
Sbjct: 195 DRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWC 254
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y++++ C+++R+ EA L++EM K + DVV YN +I G C++G+++ + E EM
Sbjct: 255 YNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMR 314
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G +T+ L++ C+ +D AI + ++ +G +P T LI LC R+
Sbjct: 315 SIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLE 374
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+A I + ++ G T +Y +I GLC++G +EAL + + M P Y
Sbjct: 375 DAYVIFQ-EILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETI 433
Query: 465 IDGYMKEG 472
I ++G
Sbjct: 434 IYALSEKG 441
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 126/250 (50%), Gaps = 4/250 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P++ T LM + G + + ++ ++G EP+ +++ L+ C + EA
Sbjct: 41 IKPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEAL 100
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + + D V+Y ++ G C++GE A + R+ + V + V + +++
Sbjct: 101 LFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRK---TWVNADVVMYSTIIDSL 157
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ V A +Y++M KG P T +L+ LC R+ +A+++L A ++K G+ P
Sbjct: 158 CKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLL-AMMMKKGVKPN 216
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y ++ G C ++ +AL + MV +G EP++ Y+ I+G K+ V+ A L K
Sbjct: 217 VVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFK 276
Query: 483 EMFENQVRQE 492
EM ++ +
Sbjct: 277 EMHWKKINPD 286
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 121/246 (49%), Gaps = 12/246 (4%)
Query: 249 TFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
++ LM G + G A + + WV D YS ++ C+ + + +A +L
Sbjct: 117 SYAILMNGLCKMGETRAAMQMLRKTWVN-------ADVVMYSTIIDSLCKGKFVTDAYRL 169
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM K + +V ++ ++ C+ + +A M GV+ + VT+ +++GYC
Sbjct: 170 YSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCL 229
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
V+ A+ ++N M ++G EP ++I LC K+RV EA+++ K K + P
Sbjct: 230 VNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWK-KINPDVV 288
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI GLC+ GK+ +L++ EM G + Y++ + K +++ A L KE+
Sbjct: 289 TYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEI 348
Query: 485 FENQVR 490
+ ++
Sbjct: 349 KDQGIQ 354
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 110/240 (45%), Gaps = 4/240 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TF L+ G G + + G + D SY++LM C +M E
Sbjct: 78 PNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLC---KMGETRAA 134
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +R V DVV Y+TII C+ + A + EM G+ + TF LV+ C+
Sbjct: 135 MQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCK 194
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A+ + M +KG +P T ++ C +V +AL+I +V+ G+ P
Sbjct: 195 DRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNV-MVQEGVEPNVW 253
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y +I GLC++ +++EA+ + EM K P + Y+ IDG K G + + L EM
Sbjct: 254 CYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEM 313
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 112/243 (46%), Gaps = 16/243 (6%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ ++ ++I +++ G+ V N +I + + K V +++E+
Sbjct: 230 VNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEM----------- 278
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
++ P+V T+N L+ G + G ++ EM +G D +Y+ L+ C
Sbjct: 279 -----HWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALC 333
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + +A L +E++D+ ++ +V Y T+I G C+ G + A F+E+ G +
Sbjct: 334 KNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVW 393
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ ++NG C+ G D A+ + + M P+ + E +I L +K + +L A
Sbjct: 394 TYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAM 453
Query: 414 VVK 416
+V+
Sbjct: 454 IVR 456
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 111/246 (45%), Gaps = 6/246 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + FN ++ + + ++ ++ G +P + ++LM +C + +
Sbjct: 8 PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ E + + + T+I G C G+ A F + G + V++ L+NG C+
Sbjct: 68 LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127
Query: 365 AGDVDSAILVYNDMCRKGF-EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G+ +A+ M RK + + +I LC + V +A + + K G+FP
Sbjct: 128 MGETRAAM----QMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAK-GIFPNV 182
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++ L+ LC++ K ++A+ + A M+ KG +P++ Y A +DGY V A +
Sbjct: 183 YTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNV 242
Query: 484 MFENQV 489
M + V
Sbjct: 243 MVQEGV 248
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 127/308 (41%), Gaps = 42/308 (13%)
Query: 45 VVSLLTHHRSKSRWNHLLSLCRSGLTPT--QFSQIALG--LKNNPHLALRFFSFTQHKSL 100
V +L + K N L + + G+ P + I G L N + AL F+ + +
Sbjct: 189 VDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGV 248
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
+ ++ Y II+ L + + + A ++ + + + +P + + +L+ + G
Sbjct: 249 -EPNVWCYNIIINGLCKKKRVDEAMNLFK-EMHWKKINPDVVTYNILIDGLCKLG----- 301
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
KI T +++V + S G +V + T N+L+ + + + + +
Sbjct: 302 ---------------KISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVK 346
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
E+ KD ++PNV T+ L+ G ++G E ++ E+ G
Sbjct: 347 EI------------KDQG----IQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHI 390
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
++Y+V++ C++ EA L M D D V+Y TII E GE + +
Sbjct: 391 TVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLL 450
Query: 341 REMGLSGV 348
M + G+
Sbjct: 451 CAMIVRGL 458
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 130/242 (53%), Gaps = 2/242 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARL-GCEPDCYSYSVLMAVFCEERRMREAE 302
+PNV+T +L+ G ++G E+ +++++ R +P+ ++Y+ +++ +C+E ++ AE
Sbjct: 933 KPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAE 992
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+E M+++ + + Y T+I G C+ G ++A E M G ++ T+ +V+G
Sbjct: 993 MLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGL 1052
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G + A + N + E +G T +LI E C + + +AL L ++ K G P
Sbjct: 1053 CKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLN-KMFKVGFQPD 1111
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y LI C + M+++ K+ E++ G P+ E Y++ I GY +E V +A +
Sbjct: 1112 IHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQ 1171
Query: 483 EM 484
+M
Sbjct: 1172 KM 1173
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 127/251 (50%), Gaps = 7/251 (2%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
R +PNVHT+ A++ G+ +E + E ++ M G P+ +Y+ L+ C+
Sbjct: 964 RSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNF 1023
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL---SGVESSSVTF 355
+A +L E M ++ + YN+I+ G C+ G RAEE F+ + + +E+ VT+
Sbjct: 1024 SKAYELMELMSNEGFFPNTCTYNSIVDGLCKRG---RAEEAFKLLNTGFQNQIEADGVTY 1080
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++ C+ D++ A++ N M + GF+P+ LI C ++ + + + L V+
Sbjct: 1081 TILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFC-RQNMMKDSEKLFDEVI 1139
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K GL PT+++Y +I G C E K+ A+K +M G P Y A I G KE ++
Sbjct: 1140 KLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLD 1199
Query: 476 MATMLRKEMFE 486
A L M +
Sbjct: 1200 EARQLYDTMID 1210
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 154/323 (47%), Gaps = 21/323 (6%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
I K++ VD++ + ++GL + N +I + + V E VF D +
Sbjct: 774 IGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLV----EYAGNVF----DEMSAR 825
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV-EMARLGCEPDCYSYSVLMAVF 292
G V P+ T+ ++VG+ R G + D W+ EM G D + ++++ F
Sbjct: 826 G--------VYPDSCTYKYIIVGYCRNGNVLEA-DRWICEMMERGFVVDNATLTLIITAF 876
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
CE+ + A + ++ + +++ Y+++I G C+ G + +A E EM +G + +
Sbjct: 877 CEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNV 936
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRK-GFEPEGSTIEVLIGELCDKRRVFEALDILK 411
T L++G C+ G + A ++ + R ++P T +I C + ++ A ++L
Sbjct: 937 YTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRA-EMLF 995
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
R+ + GL P +Y LI G C+ G +A ++ M +GF P+ Y++ +DG K
Sbjct: 996 ERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKR 1055
Query: 472 GNVEMATMLRKEMFENQVRQEDG 494
G E A L F+NQ+ + DG
Sbjct: 1056 GRAEEAFKLLNTGFQNQI-EADG 1077
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 89/171 (52%), Gaps = 4/171 (2%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
+M ++G +PD + Y+ L+A FC + M+++EKL++E+ + Y ++I G+C
Sbjct: 1102 KMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREK 1161
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+++ A +FF++M G S+++ L++G C+ +D A +Y+ M KG P T
Sbjct: 1162 KVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRV 1221
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
L E C A+ IL+ K + ++ LI+ LC E K+ A
Sbjct: 1222 TLTYEYCKTEDFASAMVILERLNKKLWI----RTVHTLIRKLCCEKKVALA 1268
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 38/198 (19%)
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEF----------------------------------- 339
H+VV ++G F EIG++ A +
Sbjct: 761 HEVV--ECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNV 818
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F EM GV S T+++++ GYCR G+V A +M +GF + +T+ ++I C+
Sbjct: 819 FDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCE 878
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
K V A+ +V K GL P +Y +I GLC+ G +++A ++ EMV G++P++
Sbjct: 879 KSLVNRAVWFFH-KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVY 937
Query: 460 IYSAFIDGYMKEGNVEMA 477
+++ I G K+G E A
Sbjct: 938 THTSLIHGLCKKGWTERA 955
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 1/201 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N+++ G + G E+ + + E D +Y++L++ C+ M +A
Sbjct: 1040 PNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVF 1099
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M + D+ Y T+I FC M +E+ F E+ G+ + T+ ++ GYCR
Sbjct: 1100 LNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCR 1159
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
V A+ + M G P+ + LI LC + R+ EA + + K GL P E
Sbjct: 1160 EKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDK-GLSPCEV 1218
Query: 425 SYMFLIKGLCEEGKMEEALKV 445
+ + L C+ A+ +
Sbjct: 1219 TRVTLTYEYCKTEDFASAMVI 1239
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 83/163 (50%), Gaps = 3/163 (1%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V +P++H + L+ F R+ + E ++ E+ +LG P +Y+ ++ +C E+++
Sbjct: 1106 VGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSL 1165
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A K +++M D D ++Y +I G C+ + A + + M G+ VT L
Sbjct: 1166 AVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTY 1225
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
YC+ D SA+++ + +K + T+ LI +LC +++V
Sbjct: 1226 EYCKTEDFASAMVILERLNKKLWI---RTVHTLIRKLCCEKKV 1265
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 210/492 (42%), Gaps = 65/492 (13%)
Query: 16 PKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWN---------------H 60
P P+P + S+STP +V+ L S RWN H
Sbjct: 6 PLPRP---AAAVASTSTPD----------IVAELGRVLSTRRWNKGSAYKRLSPSVTAAH 52
Query: 61 LLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARL 120
+ L R+ ++P +P AL FF + +H+ +S+A ++ +L+R R
Sbjct: 53 VADLFRAPVSPL-----------DPATALAFFECVARRPGFRHTAASHAALLQLLARRRA 101
Query: 121 IGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGS-----APFVFDLLIKCCLEVKNIE 175
++ + ++ ++ R G +P ++L ++ L E
Sbjct: 102 PANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTE 161
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+ + L+ GL T N +I + KG ++ I F L
Sbjct: 162 YMG---KLYSHLVQEGLLPDTVTYNTMIMAYCK-KGSLA---IAHRYFCL---------- 204
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R ++ + +T NAL++G+ R K + + M +GC + YSY++L+ CE
Sbjct: 205 --LRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEA 262
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R +REA L M ++ Y +I G C+ G + A EM L GV S T+
Sbjct: 263 RCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTY 322
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++GYC++G + A+ + M + G P+ T LI LC ++ EA ++L +
Sbjct: 323 NAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGG-KLDEAEELLNGAIA 381
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ G PT ++ LI G C+ ++++AL+V++ M+ + L+ Y I+ +K+ ++
Sbjct: 382 R-GFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLK 440
Query: 476 MATMLRKEMFEN 487
A EMF N
Sbjct: 441 EAKETLNEMFAN 452
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 16/254 (6%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P V TF L+ G+ + + V M C+ D +Y VL+ V ++ R++EA++
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM + +VV Y +II G+C++G + A E F+ M G ++ T+ L+ G +
Sbjct: 446 LNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR------RVFEALDILKARVVKFG 418
+ A+ + M G P T LI C K R+FE ++ + G
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMME-------QNG 558
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
L P E++Y L LC+ G+ EEA +V KG + Y++ +DG+ K GN + A
Sbjct: 559 LTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAA 615
Query: 479 MLRKEMFENQVRQE 492
+L ++M + +
Sbjct: 616 VLIEKMVNEGCKAD 629
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 9/222 (4%)
Query: 275 RLGCEPDCYSYSVLMAVFCEERRMREAE---KLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
RL P CY+ ++ + R E KL+ + + + D V YNT+I +C+ G
Sbjct: 139 RLVLSPKCYNLALRSLL-----RFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKG 193
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+A A +F + SG++ + T L+ GYCR D+ A + M G +
Sbjct: 194 SLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYT 253
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+LI LC+ R V EAL +L +V G +Y LIKGLC+EG++ +A + EM
Sbjct: 254 ILIQGLCEARCVREAL-VLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPL 312
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+G PS+ Y+A IDGY K G ++ A ++ M +N +D
Sbjct: 313 RGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDD 354
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 119/267 (44%), Gaps = 50/267 (18%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+ +L+ GF + G + + +M GC+ D Y+YSVL+ C+++++ EA + ++M
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQM 656
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
V+ ++VAY II + G+ A+ F EM SG + S+ T+ ++ YC+ G +
Sbjct: 657 TVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRI 716
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLI---GELCDKRRVFEALD----------------I 409
+ A + +M R G P+ T + I G + R F L +
Sbjct: 717 EEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLL 776
Query: 410 LK-------------------------------ARVVKFGLFPTEKSYMFLIKGLCEEGK 438
LK R++K GL PT +Y +I G C+ +
Sbjct: 777 LKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATR 836
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFI 465
+EEA + M+GK P+ EIY+ I
Sbjct: 837 LEEACVLLDHMLGKDISPNEEIYTMLI 863
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 35/269 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM------------- 289
V P+V T+NA++ G+ + G + + M + GC PD ++Y+ L+
Sbjct: 315 VVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEE 374
Query: 290 ----AV-----------------FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
A+ +C+ R+ +A ++ M N + D+ AY +I
Sbjct: 375 LLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLI 434
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ + A+E EM +G+ + VT+ +++GYC+ G V +A+ V+ M +G P
Sbjct: 435 KKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAW 494
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
T LI L +++ +A+ ++ ++ + G+ P +Y LI+G C++ + + A ++
Sbjct: 495 TYGSLIYGLIQDKKLHKAMALI-TKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEM 553
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
M G P + Y+ D K G E A
Sbjct: 554 MEQNGLTPDEQAYNVLTDALCKSGRAEEA 582
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 125/306 (40%), Gaps = 52/306 (16%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D V V+ N+ + ++ +EG + + ++ EM G +P +Y+V ++ +C+
Sbjct: 654 DQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKI 713
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS--- 352
R+ EAE L EM V DVV YN I G +G + RA + M + E +
Sbjct: 714 GRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTY 773
Query: 353 ------------------------------------------------VTFEHLVNGYCR 364
VT+ ++ G+C+
Sbjct: 774 WLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCK 833
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A ++ A ++ + M K P +LI CD + +A+ + +++FG P +
Sbjct: 834 ATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFV-TDMIEFGFQPQLE 892
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
SY +LI GLC+EG + A + +++G + + + DG +K G+V+ + L M
Sbjct: 893 SYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAM 952
Query: 485 FENQVR 490
R
Sbjct: 953 DNRHCR 958
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 106/260 (40%), Gaps = 33/260 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P V T+ L+ G ++ F+ ++ M + G PD +Y+VL C+ R EA
Sbjct: 524 ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAY 583
Query: 303 K--------------------------------LWEEMRDKNVEHDVVAYNTIIGGFCEI 330
L E+M ++ + D+ Y+ ++ C+
Sbjct: 584 SFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQ 643
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
++ A +M +SGV+ + V + +++ + G D A ++N+M G +P +T
Sbjct: 644 KKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTY 703
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
V I C R+ EA + L + + G+ P +Y I G G ++ A MV
Sbjct: 704 TVFISSYCKIGRIEEA-EHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMV 762
Query: 451 GKGFEPSLEIYSAFIDGYMK 470
EP+ Y + ++K
Sbjct: 763 DASCEPNCWTYWLLLKHFLK 782
>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 157/322 (48%), Gaps = 23/322 (7%)
Query: 185 RMLMSRGLSVKVSTCNALI------WEVSRGKG-----VISGYEIYREVFGLDSDATAGI 233
RM++ GL TC++LI W + + ++ G I + F L D +
Sbjct: 383 RMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRM 442
Query: 234 GKDVKRVVR---------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
G DV + P+ F+A + G G ++ DV+++M++ G P+ +
Sbjct: 443 G-DVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFV 501
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+ L+ FC R++EA L EM K + D+ N II G C+ G M A + FR M
Sbjct: 502 YNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMH 561
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
+G+ VT+ L++GYC+A D S V N M G++P+ +T + + LC R++
Sbjct: 562 HTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMS 621
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
A+ +L+ ++ G+ P +Y ++ G+C + +E A+ V A+++ F P++ +
Sbjct: 622 RAVMMLE-ELISAGVVPDTVTYNTVMNGVCTD-VLERAMIVTAKLLKMAFVPNVVTANLL 679
Query: 465 IDGYMKEGNVEMATMLRKEMFE 486
+ + K+G E M +++ E
Sbjct: 680 LSHFCKQGMPEKTIMWGQKLNE 701
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 111/228 (48%), Gaps = 1/228 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P V FN+++ + R G EK + M + G P + S L+ + R++EA
Sbjct: 355 ITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEAR 414
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L EM + + + A+ ++ G+ +G++A A + EM G+ +V F +NG
Sbjct: 415 DLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGL 474
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G VD A V+ M +KGF P LI C+ R+ EAL +L+ + + GL P
Sbjct: 475 SIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEAL-MLEREMARKGLLPD 533
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ +I GLC+EG+M+ A V M G P + Y+ IDGY K
Sbjct: 534 IFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCK 581
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 166/391 (42%), Gaps = 23/391 (5%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
A FF F + S H+L L A+DV+ +R D ++ E +
Sbjct: 10 AFGFFKFAFQDD-SDEMVKSSCVAAHVLGAQNLKFLAQDVVSWVIRRVGVDRSREVVEFM 68
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVK-NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
K + E S V D L++ L+V+ E +E IV + GL S L +
Sbjct: 69 WKRHAEFESDFSVLDTLMRGFLKVEMGCEALE----IVGRMREVGLRPSSSAITILFKLL 124
Query: 207 SRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
R S +++ R + RP FNA+++GF R+G +
Sbjct: 125 LRIGDHGSVWKLLRGMIHQGP----------------RPCNRNFNAVILGFCRKGHVKVG 168
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
E + M + C+PD Y+Y++L+ +C + +A M D +V + T+I
Sbjct: 169 ESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINA 228
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
FC G M A F M +G + V + L+NGY +A D+ A ++Y +M K P+
Sbjct: 229 FCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPD 288
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
+T +L+ R E D L + + G Y + GLC G ++EA+K
Sbjct: 289 CTTFNILVAGHYRYGRE-EDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFL 347
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+M+ KG P++ +++ I Y + G E A
Sbjct: 348 EDMLEKGITPTVVAFNSIIAAYSRAGLEEKA 378
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 125/277 (45%), Gaps = 36/277 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ TFN L+ G YR G E + + ++++ G Y++ ++ C + EA
Sbjct: 285 VAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAM 344
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT-------- 354
K E+M +K + VVA+N+II + G +A + +R M G+ SS+T
Sbjct: 345 KFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGL 404
Query: 355 ---------------------------FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
F L++GY R GDV A ++N+M +G P+
Sbjct: 405 SKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDA 464
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
I L V EA D+ ++ K G P Y LI+G C G+++EAL ++
Sbjct: 465 VAFSAFINGLSIVGLVDEAYDVF-LQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLER 523
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
EM KG P + + I+G KEG ++ A+ + + M
Sbjct: 524 EMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNM 560
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 3/221 (1%)
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
E VE +W A E D LM F + EA ++ MR+ + A +
Sbjct: 63 EVVEFMWKRHAEF--ESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITIL 120
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
IG+ + R M G + F ++ G+CR G V + M +
Sbjct: 121 FKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKC 180
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
+P+ +LI C + + F+AL ++ ++ G P+ ++ +I C +G M EA
Sbjct: 181 QPDVYAYNILINAYCTRGQTFDALGWMRF-MIDNGCTPSLVTFGTVINAFCNQGNMMEAR 239
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ M G P++ Y+ ++GY+K ++ A ML +EM
Sbjct: 240 NLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEM 280
>gi|357130244|ref|XP_003566760.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Brachypodium distachyon]
Length = 579
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 125/250 (50%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VRPN HTFN L+ R E+ + E+ G EPD +Y+ L++ +C ++++A
Sbjct: 210 VRPNTHTFNILVTALCRGEDAERAQGFLEELEEQGFEPDVVTYNTLLSGYCRRGKLQDAL 269
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ M + VE D+V++ ++ G C+ G + A F M SGV ++ + L+ GY
Sbjct: 270 HLFGVMPPRGVEPDLVSHTVLMDGLCKAGRLNDARRMFDRMVHSGVSPDAIAYSVLIAGY 329
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C V A L+ +M G EG + +I ++ L+++ + K+G+
Sbjct: 330 CNEQRVREARLLLMEMVGSGLSSEGFALRAVIESHVKVGKLLTCLNLVSP-LRKYGVVIP 388
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+SY LI LCE+ + A + MV G PSLE+Y+ +D + +V+ A ++
Sbjct: 389 LESYNCLIGALCEDMRPHAARGLFKWMVEDGHSPSLEMYNMILDCLCQCDSVDDALDVKV 448
Query: 483 EMFENQVRQE 492
EM +VR +
Sbjct: 449 EMSSREVRPD 458
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +++ L+A R E M V + +N ++ C + RA+ F
Sbjct: 177 PDTVAFNALLAALSRAGRFDELWAARAVMARAEVRPNTHTFNILVTALCRGEDAERAQGF 236
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC- 398
E+ G E VT+ L++GYCR G + A+ ++ M +G EP+ + VL+ LC
Sbjct: 237 LEELEEQGFEPDVVTYNTLLSGYCRRGKLQDALHLFGVMPPRGVEPDLVSHTVLMDGLCK 296
Query: 399 -----DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
D RR+F+ R+V G+ P +Y LI G C E ++ EA + EMVG G
Sbjct: 297 AGRLNDARRMFD-------RMVHSGVSPDAIAYSVLIAGYCNEQRVREARLLLMEMVGSG 349
Query: 454 FEPSLEIYSAFIDGYMKEGNV 474
A I+ ++K G +
Sbjct: 350 LSSEGFALRAVIESHVKVGKL 370
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 115/284 (40%), Gaps = 46/284 (16%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P++ + LM G + G ++ M G PD +YSVL+A +C E+R+REA
Sbjct: 280 VEPDLVSHTVLMDGLCKAGRLNDARRMFDRMVHSGVSPDAIAYSVLIAGYCNEQRVREAR 339
Query: 303 KLWEEM-----------------------------------RDKNVEHDVVAYNTIIGGF 327
L EM R V + +YN +IG
Sbjct: 340 LLLMEMVGSGLSSEGFALRAVIESHVKVGKLLTCLNLVSPLRKYGVVIPLESYNCLIGAL 399
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
CE A F+ M G S + +++ C+ VD A+ V +M + P+
Sbjct: 400 CEDMRPHAARGLFKWMVEDGHSPSLEMYNMILDCLCQCDSVDDALDVKVEMSSREVRPDF 459
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T + L+ LC + + ++ A +++ GL P E L+ G C+EG ++ +A
Sbjct: 460 HTYQALVTCLCRLGKSLDGKSVM-AEMIESGLQPNEAICTALVCGFCKEGYLD-----RA 513
Query: 448 EMVGKGFEPSLEI-----YSAFIDGYMKEGNVEMATMLRKEMFE 486
E++ K F ++ Y+A + Y + + L+ M +
Sbjct: 514 ELILKAFVLDFQLHCNESYNALMRAYCMTRSTSESLELQNRMLD 557
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
D VA+N ++ G M + V ++ TF LV CR D + A
Sbjct: 178 DTVAFNALLAALSRAGRFDELWAARAVMARAEVRPNTHTFNILVTALCRGEDAERAQGFL 237
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
++ +GFEP+ T L+ C + ++ +AL + + G+ P S+ L+ GLC+
Sbjct: 238 EELEEQGFEPDVVTYNTLLSGYCRRGKLQDALHLFGVMPPR-GVEPDLVSHTVLMDGLCK 296
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
G++ +A ++ MV G P YS I GY E V A +L EM + + E
Sbjct: 297 AGRLNDARRMFDRMVHSGVSPDAIAYSVLIAGYCNEQRVREARLLLMEMVGSGLSSE 353
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 80/184 (43%), Gaps = 1/184 (0%)
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
SY+ L+ CE+ R A L++ M + + YN I+ C+ + A + EM
Sbjct: 391 SYNCLIGALCEDMRPHAARGLFKWMVEDGHSPSLEMYNMILDCLCQCDSVDDALDVKVEM 450
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
V T++ LV CR G V +M G +P + L+ C + +
Sbjct: 451 SSREVRPDFHTYQALVTCLCRLGKSLDGKSVMAEMIESGLQPNEAICTALVCGFCKEGYL 510
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
A ILKA V+ F L E SY L++ C E+L++Q M+ GF PS E +
Sbjct: 511 DRAELILKAFVLDFQLHCNE-SYNALMRAYCMTRSTSESLELQNRMLDLGFVPSSETCRS 569
Query: 464 FIDG 467
I G
Sbjct: 570 LIYG 573
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 91/221 (41%), Gaps = 16/221 (7%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+ K+ TC+++V L G+ + + + N LI + + +++ + D +
Sbjct: 367 VGKLLTCLNLVSPLRKYGVVIPLESYNCLIGALCEDMRPHAARGLFKWMV---EDGHS-- 421
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
P++ +N ++ + + + DV VEM+ PD ++Y L+ C
Sbjct: 422 -----------PSLEMYNMILDCLCQCDSVDDALDVKVEMSSREVRPDFHTYQALVTCLC 470
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + + + EM + ++ + ++ GFC+ G + RAE + L +
Sbjct: 471 RLGKSLDGKSVMAEMIESGLQPNEAICTALVCGFCKEGYLDRAELILKAFVLDFQLHCNE 530
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
++ L+ YC ++ + N M GF P T LI
Sbjct: 531 SYNALMRAYCMTRSTSESLELQNRMLDLGFVPSSETCRSLI 571
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 120/250 (48%), Gaps = 3/250 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAVFCEERRMREA 301
+ P+V TFN+L+ + G D++ EM R G PD Y+++ L++ FC+ + +A
Sbjct: 172 ISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQA 231
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM--GLSGVESSSVTFEHLV 359
+++EM + DVV YNTII G C G++ A M + V + V++ L+
Sbjct: 232 FTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLL 291
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
GYC ++D A+LV+++M +G +P T LI L + R E L
Sbjct: 292 RGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTF 351
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P ++ LIK C+ G ++ A+KV EM+ P YS I + A
Sbjct: 352 SPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAET 411
Query: 480 LRKEMFENQV 489
L E+FE +V
Sbjct: 412 LFNELFEKEV 421
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 186/452 (41%), Gaps = 92/452 (20%)
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKL--K 142
P LRFF + +K H S+ ++ L RAR + AR+ + + KL +
Sbjct: 84 PADGLRFFDWVYNKGF-SHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSNGCVKLQDR 142
Query: 143 LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
F L+++Y G + V++ + + G+S V T N+L
Sbjct: 143 YFNSLIRSYGNAGL--------------------FQESVNLFQTMKKMGISPSVLTFNSL 182
Query: 203 I-WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
+ + RG+ G+ D + +++R V P+ +TFN L+ GF +
Sbjct: 183 LSILLKRGRT------------GMAHD----MFDEMRRTYGVTPDSYTFNTLISGFCKNS 226
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK--NVEHDVVA 319
++ ++ EM C PD +Y+ ++ C +++ A L M K V ++V+
Sbjct: 227 MVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVS 286
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG------------------ 361
Y T++ G+C E+ A F EM G++ ++VT+ L+ G
Sbjct: 287 YTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGD 346
Query: 362 ------------------YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
+C AG +D+A+ V+ +M P+ ++ VLI LC +
Sbjct: 347 AFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEF 406
Query: 404 FEALDILKARVVKFGLF------PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE-P 456
+A + K L P +Y + + LC GK ++A KV +++ +G + P
Sbjct: 407 DKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQDP 466
Query: 457 SLEIYSAFIDGYMKEGNVEMA-----TMLRKE 483
S Y I G +EG + A MLR+E
Sbjct: 467 S--SYRTLITGLCREGKFKAAYELLVLMLRRE 496
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%)
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
F L+ Y AG ++ ++ M + G P T L+ L + R A D+
Sbjct: 144 FNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMR 203
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+G+ P ++ LI G C+ +++A + EM P + Y+ IDG + G V
Sbjct: 204 RTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKV 263
Query: 475 EMATMLRKEMFE 486
++A L M +
Sbjct: 264 KIAHNLLNGMLK 275
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 102/283 (36%), Gaps = 54/283 (19%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P +N + G ++ E V+ ++ + G + D SY L+ C E + + A +
Sbjct: 429 KPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQ-DPSSYRTLITGLCREGKFKAAYE 487
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L M + D Y +I G +IGE A + + M S + TF ++
Sbjct: 488 LLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELV 547
Query: 364 R-----------------------------------AGDVDSAILVYNDMCRKGFEPEGS 388
+ + + A L+ + G+ +
Sbjct: 548 KRKFANDSFGLLTVMLEKRIRQNIDLSTQAVRLVFSSAQKEKAFLIVRLLYDNGYLIK-- 605
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF-------LIKGLCEEGKMEE 441
+E L+ LC+ R++ +A ++ LF EKS M +I+GLC+ + E
Sbjct: 606 -MEELLDFLCENRKLLDAHTLV--------LFCLEKSQMVDIDTCNTIIEGLCKHKRHSE 656
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
A + E+V G L + + G E + K M
Sbjct: 657 AFSLYNELVELGNHQQLSCHVVLTNALEAAGKWEELQFVSKRM 699
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 146/294 (49%), Gaps = 17/294 (5%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+E++E + I ++ G + C+ +I E+ + E+ E F L +
Sbjct: 281 MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKK-------ELVEEAFSL----ACKL 329
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
G D+ V PNV +NAL+ + F+ + ++ EMA G EP+ +Y++L+ C
Sbjct: 330 G-DLGMV----PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + +A L+++MRDK ++ V YN++I G+C+ G + RA M G+ ++
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 444
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
++ L+ G CR GD+ S + ++ +M +G T LI C +++ EA + +
Sbjct: 445 SYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD-K 503
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++ + P E ++ +I+G C G + +A ++ +MV G +P Y + I G
Sbjct: 504 MIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 1/245 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +T + ++ + F D++ +M + G D Y Y+ + +CE R + A L
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M + V+ V YN ++ G C+ + A E M GV + VT+ LV G+CR
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+++ A+ + +DM R GF P + +I EL K V EA L ++ G+ P +
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS-LACKLGDLGMVPNVFA 340
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI LC+ + ++A ++ EM G+G EP+ Y+ I K G +E A L +M
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400
Query: 486 ENQVR 490
+ ++
Sbjct: 401 DKGIK 405
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 115/222 (51%), Gaps = 1/222 (0%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
++ LG P+ ++Y+ L+ C+ R +A++L++EM + +E + V Y +I C+ G
Sbjct: 328 KLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 387
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A F +M G++ + + L+NGYC+ G +D A + + M ++G P ++
Sbjct: 388 MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 447
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
LI LC + ++ L + + G+ ++ LI G C++ KM+EA ++ +M+
Sbjct: 448 PLIAGLCRNGDLSSCME-LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 506
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
P+ ++ I+GY GN+ A L +M E ++ ++
Sbjct: 507 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 122/247 (49%), Gaps = 2/247 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N + AL+ GF+REG F + +W EMA G + D S+++++ ++ ++ L+
Sbjct: 582 NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 641
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM+++ V+ D + Y +I + M +A + +M + G ++VT L+N C++
Sbjct: 642 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKS 701
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + SA L+ +M P T + + + +A D+ A + G + S
Sbjct: 702 GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ--GHLASIVS 759
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+ LIKGLC+ GK++EA+ + +++ GF P YS I K G++ A L EM
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819
Query: 486 ENQVRQE 492
++ +
Sbjct: 820 YKGLKPD 826
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 150/331 (45%), Gaps = 20/331 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+V+ I+ E +N++ V VRM S G+ N L++ + + V E+
Sbjct: 199 YVYTAGIRAYCESRNLDGARGLV--VRM-ESEGVKASAVPYNVLMYGLCKNMRVQEAVEV 255
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
K+V + V + T+ L+ GF R E + +M RLG
Sbjct: 256 ----------------KNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF 299
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P + S ++ ++ + EA L ++ D + +V AYN +I C+ A+
Sbjct: 300 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 359
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F+EM G+E + VT+ L++ C+ G ++ A+ +++ M KG + LI C
Sbjct: 360 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYC 419
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ + A +L +VK GL PT SY LI GLC G + +++ EM +G +
Sbjct: 420 KQGSLDRARGLLSG-MVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN 478
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++A I+G+ K+ ++ A L +M ++ V
Sbjct: 479 YTFTALINGFCKDKKMDEAARLFDKMIDSNV 509
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 140/313 (44%), Gaps = 17/313 (5%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+ +C+++ R + RG++ T ALI + K + ++ ++ +DS+
Sbjct: 459 LSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM--IDSN-------- 508
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
V PN TFN ++ G+ G K ++ +M +G +PD Y+Y L++ C
Sbjct: 509 ------VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ +A + ++ + + + ++ GF G + EM + GV+ V+F
Sbjct: 563 GVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFT 622
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
+V + D + + +++ +M +G +P+ +I L + + +AL+ VV
Sbjct: 623 IIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVD 682
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G P ++ LI LC+ G + A + EM+ P+ Y+ F+D + EG++E
Sbjct: 683 -GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEK 741
Query: 477 ATMLRKEMFENQV 489
A L M + +
Sbjct: 742 AKDLHSAMLQGHL 754
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 2/225 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+ + ++ +E + + W +M G P+ +++VL+ C+ + AE
Sbjct: 649 VKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAE 708
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM NV + YN + F G+M +A++ M L G +S V+F L+ G
Sbjct: 709 LLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGL 767
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+AG + AI + + + GF P+ + +I ELC + +A ++ + K GL P
Sbjct: 768 CKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK-GLKPD 826
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+Y I+ G+ ++AL + M+ G +P+ + Y A + G
Sbjct: 827 VVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+FN L+ G + G ++ D+ ++ G PDC SYS ++ C+ + +A +LW EM
Sbjct: 759 SFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM 818
Query: 309 RDKNVEHDVVAYNTIIGGFCEI-GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
K ++ DVVAYN I +C + GE +A + M SGV+ + T+ L++G
Sbjct: 819 LYKGLKPDVVAYNIFI-RWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI----- 872
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
S +L Y+ C +G + I++ + EL D
Sbjct: 873 --SLMLHYDFSCFRGTK---QYIQISVYELMD 899
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 203/472 (43%), Gaps = 54/472 (11%)
Query: 21 QLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTP--TQFSQIA 78
QLL + T + PP+ ++N + +S + + L S+ G P + ++ +
Sbjct: 577 QLLEEM-TRTIYPPNLITYNTVLDCLS--KNGEVNCAIDMLYSMTEKGCAPDLSSYNTVM 633
Query: 79 LGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND 138
GL L F F Q K + ++ TI+ + L+ A ++
Sbjct: 634 YGLIKEERLEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVK--------- 684
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
E ++K C F L++ L+ +EK ++ + SRG+ +
Sbjct: 685 ------EYILKA--GCNVDKSSFHSLMEGILKKAGVEK---SIEFAENIASRGILLNDFF 733
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
LI + + K + ++++ + GL G ++N+L+ G
Sbjct: 734 LCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTG----------------SYNSLIRGLV 777
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
E + ED++ EM RLGC PD ++Y++++ + R+ E K+ +EM K E V
Sbjct: 778 DENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYV 837
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
YNTII G + + +A + + + G + T+ L++G ++G + A ++N+M
Sbjct: 838 TYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEM 897
Query: 379 CRKGFEPEGSTIEVLI------GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
G EP + +L+ G + ++FE ++V+ G+ P KSY LI
Sbjct: 898 LEYGCEPNCTIYNILLNGHRIAGNTENVCQLFE-------KMVEQGINPDIKSYTILIDT 950
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LC G++ + L ++ G EP L +Y+ IDG K +E A L EM
Sbjct: 951 LCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEM 1002
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 160/379 (42%), Gaps = 34/379 (8%)
Query: 110 TIIHILSRARLIGPARDVIRVALRSP---ENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+++H+L A A ++ A R P L++ + G VFDL+ K
Sbjct: 70 SVVHMLRSAPDPAEALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGDMAQVFDLMQK 129
Query: 167 CCLEVKNIEKIETCVDIV-------------RMLMSRGLSVKVSTCNALIWEVSRGKGVI 213
++ N+ T V ++ G+S+ T N LI+ + +
Sbjct: 130 QVVKT-NVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDA 188
Query: 214 SGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
E+Y+ + D + P+V T++ LMV F ++ + V + EM
Sbjct: 189 EAMEVYKAMV---EDG-------------ISPSVRTYSVLMVAFGKKRDVDTVLWLLNEM 232
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
G +P+ YSY++ + V + R EA + +M D + DVV + II C+ G +
Sbjct: 233 EARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRL 292
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+ A+ F +M S + VT+ L++ +GD S + V+N M G+ + +
Sbjct: 293 SDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAV 352
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ LC RV EAL + K G+ P + SY LI G + + AL++ M G
Sbjct: 353 VDALCQVGRVDEALAVFDEMKEK-GMSPEQYSYNSLISGFLKADMFDRALELFNHMNACG 411
Query: 454 FEPSLEIYSAFIDGYMKEG 472
P+ + FI+ Y K G
Sbjct: 412 PSPNGYTHVLFINYYGKSG 430
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 118/244 (48%), Gaps = 1/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P +++N+L+ GF + F++ +++ M G P+ Y++ + + + + + +A
Sbjct: 377 MSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAI 436
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +E M+ K + DV A N ++ G + A+ F E+ GV ++T+ ++
Sbjct: 437 QRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCC 496
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+A D A+ ++DM G P+ + LI L + EA + ++ + + PT
Sbjct: 497 SKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFH-KLKEMKIEPT 555
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ GL EGK++E +++ EM + P+L Y+ +D K G V A +
Sbjct: 556 NGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLY 615
Query: 483 EMFE 486
M E
Sbjct: 616 SMTE 619
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 1/244 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+F++LM G ++ EK + +A G + + L+ C+ ++ EA +L+ +
Sbjct: 698 SFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKF 757
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ V +YN++I G + + AE+ F EM G T+ +++ ++ V
Sbjct: 758 KGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRV 817
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ + V +M RKG+E T +I L +R+ +A+D L ++ G PT +Y
Sbjct: 818 EEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAID-LYYNLMSEGFSPTPCTYGP 876
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
L+ GL + GKM +A + EM+ G EP+ IY+ ++G+ GN E L ++M E
Sbjct: 877 LLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQG 936
Query: 489 VRQE 492
+ +
Sbjct: 937 INPD 940
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 13/257 (5%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ T+ L+ G + V +VW M G + SY+ ++ C+ R+ EA
Sbjct: 308 KPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALA 367
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+++EM++K + + +YN++I GF + RA E F M G + T +N Y
Sbjct: 368 VFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYG 427
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFEALDILKARVVKF 417
++G AI Y M KG P+ + ++ G L +RVF L +
Sbjct: 428 KSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAM------- 480
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G+ P +Y +IK + K +EA+ ++MV G P + ++ ID K G A
Sbjct: 481 GVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEA 540
Query: 478 TMLRKEMFENQVRQEDG 494
L ++ E ++ +G
Sbjct: 541 WQLFHKLKEMKIEPTNG 557
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 138/308 (44%), Gaps = 20/308 (6%)
Query: 154 CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVI 213
CG F ++L++ + ++E + + + + +G T N +I + + K +
Sbjct: 797 CGPDEFTYNLILDA---MGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLE 853
Query: 214 SGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
++Y + L S+ + P T+ L+ G + G E+++ EM
Sbjct: 854 QAIDLY---YNLMSEGFS-------------PTPCTYGPLLDGLLKSGKMVDAENLFNEM 897
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
GCEP+C Y++L+ +L+E+M ++ + D+ +Y +I C G +
Sbjct: 898 LEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRL 957
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+FR++ G+E + + L++G ++ ++ A+ ++N+M +KG P T L
Sbjct: 958 NDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSL 1017
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
I L + EA + + +++ G P+ +Y LI+G G + A +M+ G
Sbjct: 1018 ILHLGKAGKAAEAAQMYE-ELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGG 1076
Query: 454 FEPSLEIY 461
+P+ Y
Sbjct: 1077 CQPNSSTY 1084
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 111/241 (46%), Gaps = 2/241 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V NA++ G + V+ E+ +G PD +Y++++ + + EA
Sbjct: 447 IVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAM 506
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +M + DV+A N++I + G+ A + F ++ +E ++ T+ L++G
Sbjct: 507 NFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGL 566
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
R G V + + +M R + P T ++ L V A+D+L + K G P
Sbjct: 567 GREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEK-GCAPD 625
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY ++ GL +E ++EEA ++ +M K P + ++K G ++ A K
Sbjct: 626 LSSYNTVMYGLIKEERLEEAFRMFCQM-KKILAPDYATLCTILPSFVKNGLMKEALHTVK 684
Query: 483 E 483
E
Sbjct: 685 E 685
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 123/277 (44%), Gaps = 7/277 (2%)
Query: 204 WEVSRGKGVISGYEIYREV-FGLDSDATAGIGKDV---KRVVRVRPNVHTFNALMVGFYR 259
+E + KG++ V + L G+ K V + + V P+ T+ ++ +
Sbjct: 439 YEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSK 498
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
++ + + +M GC PD + + L+ + + EA +L+ ++++ +E
Sbjct: 499 ASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGT 558
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YNT++ G G++ + EM + + +T+ +++ + G+V+ AI + M
Sbjct: 559 YNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMT 618
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
KG P+ S+ ++ L + R+ EA + +K L P + ++ + G M
Sbjct: 619 EKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQ--MKKILAPDYATLCTILPSFVKNGLM 676
Query: 440 EEALKVQAEMVGK-GFEPSLEIYSAFIDGYMKEGNVE 475
+EAL E + K G + + ++G +K+ VE
Sbjct: 677 KEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVE 713
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 122/236 (51%), Gaps = 2/236 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + FN ++ G R+ ++ + + G PD ++Y L+ C+ +++ EA L
Sbjct: 359 PSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNL 417
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W++M++ V+ +V Y++++ G+CE G M A + + EM G + VT+ L+ GY +
Sbjct: 418 WDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIK 477
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D+A + N+M + G T +LI L RV E ++LK R + G PT
Sbjct: 478 KKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLK-RFLSEGFVPTTM 536
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y +I G + G M A + +M KG P++ Y++FIDGY + ++A L
Sbjct: 537 TYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKL 592
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+ LM G+ ++ AF+ + EM + G Y+Y++L+ R+ E +++
Sbjct: 463 PNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEM 522
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + + YN+II GF + G M A +R+M G+ + VT+ ++GYCR
Sbjct: 523 LKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCR 582
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D A+ + + R G +P+ + I C + + AL L ++K GL P
Sbjct: 583 TNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFL-VLLLKDGLTPDVT 641
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y + G M EA K M+ + EIY+ IDG+ K GNV A L EM
Sbjct: 642 VYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEM 701
Query: 485 FENQVRQED 493
N V +D
Sbjct: 702 MANHVIPDD 710
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 154/348 (44%), Gaps = 55/348 (15%)
Query: 193 SVKVSTCNAL-IWEVSRGKGVISGYEIYREVF------GLDSDAT------AGIGKDVKR 239
++ S +AL +++ RGKG + ++Y V G+ DA AG G
Sbjct: 161 ALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAG----- 215
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V+P+ + + G + ++ V +M G EP +YS ++ V + RRM
Sbjct: 216 ---VKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMD 272
Query: 300 EAEKLWEEMR-DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EA +L ++M + DVV ++ G+C GE+ +A + F E+ GV ++VT+ L
Sbjct: 273 EALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVL 332
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA------ 412
+ G G D + M +G P ++I L +R +A+ +LK
Sbjct: 333 IKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV 392
Query: 413 ---------------------------RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
++ + G+ P+ +Y L+ G CE+G+M+EALK+
Sbjct: 393 PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKL 452
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+EM KGF P+ Y+ + GY+K+ + A L EM +N V D
Sbjct: 453 YSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGD 500
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 136/309 (44%), Gaps = 22/309 (7%)
Query: 153 ECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
CG + +++LI V + +++ ++++ +S G T N++I + +
Sbjct: 497 SCGD--YTYNILINGLYMVNRVCEVD---EMLKRFLSEGFVPTTMTYNSIINGFVKAGMM 551
Query: 213 ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
S + +YR++ R + PN+ T+ + + G+ R + + +
Sbjct: 552 GSAFGMYRQM----------------RKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIY 595
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
+ R G +PD +Y+ + FC++ M A + + DV YN+ + G+ +
Sbjct: 596 VRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKM 655
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
MA A +F+ M V + + + L++G+ + G+V A+ +Y++M P+ T
Sbjct: 656 MAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTA 715
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
L LC + A +L + + + P +Y LI +GK++EA ++ EM+
Sbjct: 716 LTHGLCRSGDIDGAKRLLD-DMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSS 774
Query: 453 GFEPSLEIY 461
G P Y
Sbjct: 775 GVVPDDTTY 783
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 90/218 (41%)
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+ M G PD S + L+ +A L++EMR K D Y+ +I
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G A F EM +GV+ + ++G C+ D D A+ V M GFEP T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
++ L RR+ EAL + ++ G L+ G C G++ +AL + E+
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
V G P+ Y I G EG + L ++M E
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQ 355
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
RV + + L+ GF + G +++ EM PD +++ L C + A
Sbjct: 670 RVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGA 729
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
++L ++MR +V ++V YN +I G++ A + EM SGV T++ L
Sbjct: 730 KRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 128/284 (45%), Gaps = 42/284 (14%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P V T+ L+ G + ++ EM GCEP+ Y+Y+VL+ C+E RM EA K+
Sbjct: 288 PTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKM 347
Query: 305 WEEMRDKNVEHDVV-----------------------------------AYNTIIGGFCE 329
EM +K V VV YN +I GFC
Sbjct: 348 LNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCR 407
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
M RA +M S + VT+ L++G C G VDSA ++ M R GF P+ T
Sbjct: 408 GKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWT 467
Query: 390 IEVLIGELCDKRRVFEA---LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
+ LC RV EA L+ LK + VK E +Y LI G C+ GK+E A +
Sbjct: 468 FNAFMVCLCRMGRVGEAHQILESLKEKHVK----ANEHAYTALIDGYCKAGKIEHAASLF 523
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
M+ + P+ ++ IDG KEG V+ A +L ++M + V+
Sbjct: 524 KRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVK 567
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 196/472 (41%), Gaps = 37/472 (7%)
Query: 54 SKSRWNHLLSL--CRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATI 111
S+ RW SL LTP+ + L +P AL FF + + HSL+++ ++
Sbjct: 34 SRPRWRKDPSLKTLIPSLTPSLLCSL-FNLNPDPLTALNFFRWIRRHHNFPHSLATHHSL 92
Query: 112 IHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFD----LLIKC 167
+ +L R R + A +V ++S P F L+ R +A D L K
Sbjct: 93 LLLLVRHRTLRAAENVRNSMIKSC-TSPHDATF--LLNLLRRMNTAAAAADHQHQLAFKL 149
Query: 168 CLEVKN--------IEKIETCVDIVR-MLMSRGLSV--KVSTCNALIWEVSRGKGVISGY 216
L N ++ + + + ML G SV + T N ++ + +
Sbjct: 150 SLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVAR 209
Query: 217 EIYREVF----GLDSDATAGI------GKDVKRVVRV-----RPNVHTFNALMVGFYREG 261
+ + G D + DV+R V R N ++ L+ G G
Sbjct: 210 LFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLCEAG 269
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ + W M GC P +Y+VL+ CE R EA L+ EMR++ E +V Y
Sbjct: 270 KLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYT 329
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
+I C+ G M A + EM GV S V F L+ YC+ G ++ A+ V M K
Sbjct: 330 VLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESK 389
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
P T LI C + + A+ +L ++V+ L P +Y LI GLCE G ++
Sbjct: 390 KVCPNVRTYNELICGFCRGKSMDRAMALLN-KMVESKLSPDVVTYNTLIHGLCEVGVVDS 448
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
A ++ M+ GF P ++AF+ + G V A + + + E V+ +
Sbjct: 449 ASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANE 500
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 150/309 (48%), Gaps = 17/309 (5%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+E V ++ ++ S+ + V T N LI RGK + A A + K
Sbjct: 376 MEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSM--------------DRAMALLNKM 421
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
V+ ++ P+V T+N L+ G G + ++ M R G PD ++++ M C
Sbjct: 422 VES--KLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMG 479
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
R+ EA ++ E +++K+V+ + AY +I G+C+ G++ A F+ M +S+TF
Sbjct: 480 RVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFN 539
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
+++G + G V A+L+ DM + +P T +L+ E+ + A +IL R++
Sbjct: 540 VMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILN-RLIS 598
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G P +Y IK C +G++EEA ++ ++ +G IY+ I+ Y G ++
Sbjct: 599 SGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDS 658
Query: 477 ATMLRKEMF 485
A + + MF
Sbjct: 659 AFGVLRRMF 667
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V FNAL+ + + G E V M P+ +Y+ L+ FC + M A
Sbjct: 356 VAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAM 415
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF------- 355
L +M + + DVV YNT+I G CE+G + A FR M G TF
Sbjct: 416 ALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCL 475
Query: 356 ------------------------EH----LVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
EH L++GYC+AG ++ A ++ M + P
Sbjct: 476 CRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNS 535
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T V+I L + +V +A+ +L + KF + PT +Y L++ + +E + A ++
Sbjct: 536 ITFNVMIDGLRKEGKVQDAM-LLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILN 594
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
++ G++P++ Y+AFI Y +G +E A
Sbjct: 595 RLISSGYQPNVVTYTAFIKAYCSQGRLEEA 624
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 110/270 (40%), Gaps = 28/270 (10%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TFN ++ G +EG + + +MA+ +P ++Y++L+ +E A ++
Sbjct: 533 PNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEI 592
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + +VV Y I +C G + AEE ++ GV S + L+N Y
Sbjct: 593 LNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGC 652
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL-----------------------CDKR 401
G +DSA V M G EP T +L+ L D
Sbjct: 653 MGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNT 712
Query: 402 RVFEALD-----ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
++ +D +L ++ + G P +Y LI GLC+ G++ A + M G P
Sbjct: 713 DIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISP 772
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
S I+++ + K G A L M E
Sbjct: 773 SEIIHNSLLSSCCKLGMFGEAVTLLDSMME 802
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 127/246 (51%), Gaps = 6/246 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+N L+ + + ++VEM+ GC PD +Y+ +++ C+ ++ +A +L
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ V YN +I G C+ G + A + EM +GV+ + V++ ++N C
Sbjct: 237 AGRFKPS-----VPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G+V+ A ++ M +G + T LI + +++EALD+ K +++ G P
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKL-MIQDGCEPNVV 350
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI GLC G +EEAL+V +M G P++ YS IDG+ K G++ A+ M
Sbjct: 351 AYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRM 410
Query: 485 FENQVR 490
+ R
Sbjct: 411 ISHGCR 416
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 118/484 (24%), Positives = 200/484 (41%), Gaps = 80/484 (16%)
Query: 73 QFSQIALGLKNNPHLA--LRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRV 130
Q S + LK + +L+ L FFS + + +H+ S+Y +I L R D+++
Sbjct: 40 QESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRE----CEMDMVQY 95
Query: 131 ALRSPENDPKL---KLFEVLVKTYRECGSA----------------PFV--FDLLIKCCL 169
L+ + D LF ++ Y+ GSA P V ++ L+ L
Sbjct: 96 ILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALL 155
Query: 170 EVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDS 227
+ I + + GL V T N L+ + + V + ++++ E+ G
Sbjct: 156 SENKFQMINP---LYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPP 212
Query: 228 DAT-----------AGIGKDVKRVV-RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
DA AG D + + R +P+V +NAL+ G +EG E + EM
Sbjct: 213 DAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMD 272
Query: 276 LGCEPDCYSYSVLMAVFC-----------------------------------EERRMRE 300
G +P+ SYS ++ C ++ E
Sbjct: 273 NGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYE 332
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A LW+ M E +VVAYNT+I G C G + A + +M SG + T+ L++
Sbjct: 333 ALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILID 392
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G+ ++GD+ A +N M G P T ++ LC K +F+ + L ++ G
Sbjct: 393 GFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC-KNSMFDQANSLVEKMTLEGCT 451
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P ++ IKGLC G++E A+K+ M G G P++ Y+ +D + E A L
Sbjct: 452 PNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGL 511
Query: 481 RKEM 484
+E+
Sbjct: 512 FQEI 515
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 170/411 (41%), Gaps = 48/411 (11%)
Query: 66 RSGLTPTQFSQI----ALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLI 121
+ GL P F+ AL + A + F +K C +Y T++ L +A I
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG-CPPDAVTYTTMVSSLCKAGKI 230
Query: 122 GPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCV 181
AR++ + P + ++ L+ + G +IE +
Sbjct: 231 DDAREL------AGRFKPSVPVYNALIDGMCKEG--------------------RIEVAI 264
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
++ +M G+ V + + +I + V + ++ ++F DA
Sbjct: 265 KLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDA------------ 312
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
N+HTF L+ G + G + D+W M + GCEP+ +Y+ L+ C + EA
Sbjct: 313 ----NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++ ++M+ +V Y+ +I GF + G++ A E + M G + VT+ +V+
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ D A + M +G P T I LC RV A+ +L+ R+ G P
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLE-RMQGHGCLP 487
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+Y L+ L K EEA + E+ + +P+L Y+ + G+ + G
Sbjct: 488 NITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAG 538
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 136/331 (41%), Gaps = 29/331 (8%)
Query: 152 RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
R C + F LIK C K+ +D+ ++++ G V N LI G
Sbjct: 308 RGCDANIHTFTPLIKGCFMRG---KLYEALDLWKLMIQDGCEPNVVAYNTLI------HG 358
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
+ S + + D +G PNV T++ L+ GF + G + W
Sbjct: 359 LCSNGSLEEALQVCDQMQRSG----------CLPNVTTYSILIDGFAKSGDLVGASETWN 408
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
M GC P+ +Y+ ++ V C+ +A L E+M + + + +NT I G C G
Sbjct: 409 RMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNG 468
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A + M G + T+ L++ R + A ++ ++ + +P T
Sbjct: 469 RVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN 528
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
++ + EAL + +V+ G P +Y +I C++GK +K+ A++V
Sbjct: 529 TVLYGFSRAGMMGEALQLFGKALVR-GTAPDSITYNTMIHAYCKQGK----VKIAAQLVE 583
Query: 452 -----KGFEPSLEIYSAFIDGYMKEGNVEMA 477
K + P + Y++ I G N+E A
Sbjct: 584 RVSSMKEWHPDIITYTSLIWGACNWMNIEEA 614
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 2/188 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TFN + G G E + M GC P+ +Y+ L+ + EA L
Sbjct: 452 PNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGL 511
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++E+ +N++ ++V YNT++ GF G M A + F + + G S+T+ +++ YC+
Sbjct: 512 FQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK 571
Query: 365 AGDVD-SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G V +A LV K + P+ T LI C+ + EA+ L + + G+ P
Sbjct: 572 QGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLD-KAINQGICPNF 630
Query: 424 KSYMFLIK 431
++ L++
Sbjct: 631 ATWNALVR 638
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 43/237 (18%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F ++ G+ R G+ E+ ++ + GC+P Y+ L+ E + + L+ M+
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ +V YN L+ C+ VD
Sbjct: 172 KDGLIPNVFTYNI-----------------------------------LLKALCKNDRVD 196
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF-PTEKSYMF 428
+A ++ +M KG P+ T ++ LC ++ +A ++ G F P+ Y
Sbjct: 197 AAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELA-------GRFKPSVPVYNA 249
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
LI G+C+EG++E A+K+ EM+ G +P++ YS I+ GNVE+A L +MF
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMF 306
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/284 (19%), Positives = 117/284 (41%), Gaps = 40/284 (14%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVI-RVALRSPENDPKLKLFEVLVKTYRECGSAPF 159
C+ ++ +Y ++ +L + + A ++ ++ L P F +K CG+
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCT--PNTMTFNTFIKGL--CGNG-- 468
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
++E + ++ + G ++T N L+ + R Y
Sbjct: 469 ----------------RVEWAMKLLERMQGHGCLPNITTYNELLDALFR-------MNKY 505
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
E FGL + A ++PN+ T+N ++ GF R G + ++ + G
Sbjct: 506 EEAFGLFQEIEAR---------NLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTA 556
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH-DVVAYNTIIGGFCEIGEMARAEE 338
PD +Y+ ++ +C++ +++ A +L E + H D++ Y ++I G C + A
Sbjct: 557 PDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMA 616
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
F + G+ + T+ LV + + I + +D+ RKG
Sbjct: 617 FLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 143/289 (49%), Gaps = 9/289 (3%)
Query: 210 KGVISGYEIYREVFGLDSDATAGIGKD------VKRVVR--VRPNVHTFNALMVGFYREG 261
K + G+ + +G+ + IG+ ++R+ R +RPNV ++ ++ ++
Sbjct: 153 KVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDT 212
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
++ D++ EM G PD +YS+L++ FC ++ A L EM +N+ D+ Y
Sbjct: 213 LVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYT 272
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
++ C+ G++ AE M + V V + L++GYC +V++A V+ M +
Sbjct: 273 ILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQM 332
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G P+ ++I LC +RV EAL++ + + + + P +Y LI LC+ G++
Sbjct: 333 GVTPDVHCYSIMINGLCKIKRVDEALNLFE-EIHQKNMVPDTVTYTSLIDCLCKSGRISY 391
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+ EM+ +G P + Y+ ID K G+++ A L +M + +R
Sbjct: 392 VWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIR 440
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 7/274 (2%)
Query: 217 EIYREVFGLDSDATAGIGKDVKRVVRV------RPNVHTFNALMVGFYREGAFEKVEDVW 270
+IY +D+ G K+ + V+ V +V ++ LM G+ + V+
Sbjct: 267 DIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVF 326
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
M ++G PD + YS+++ C+ +R+ EA L+EE+ KN+ D V Y ++I C+
Sbjct: 327 YTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKS 386
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G ++ + F EM G +T+ +L++ C+ G +D AI ++N M + P T
Sbjct: 387 GRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTF 446
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+L+ LC R+ AL+ + + K G ++Y +I GLC+EG ++EAL +Q+ M
Sbjct: 447 TILLDGLCKVGRLKNALEFFQDLLTK-GYCLNVRTYTVMINGLCKEGLLDEALALQSRME 505
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G + I + + + A L +EM
Sbjct: 506 DNGCISDAVTFEIMIRAFFDKDENDKAEKLVREM 539
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 119/235 (50%), Gaps = 1/235 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V T++ L+ GF G + D+ EM PD Y+Y++L+ C+E +++EAE
Sbjct: 229 ISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAE 288
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ M V DVV Y+T++ G+C + E+ A+ F M GV + ++NG
Sbjct: 289 NVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGL 348
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ VD A+ ++ ++ +K P+ T LI LC R+ D+ + + G P
Sbjct: 349 CKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDR-GQPPD 407
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI LC+ G ++ A+ + +M + P++ ++ +DG K G ++ A
Sbjct: 408 VITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNA 462
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 9/230 (3%)
Query: 243 VRPNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
V P+ T N ++ F G AF V + +LG +P+ + + LM C E ++
Sbjct: 89 VEPDYFTLNIIINCFCHFGQVVLAFSGVSKIL----KLGYQPNTITLNTLMKGLCLEGKV 144
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+EA + +++ + ++Y +I G C+IGE A R + + + V + +
Sbjct: 145 KEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMI 204
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
++ C+ VD A +Y +M KG P+ T +L+ C ++ A+D+L V++
Sbjct: 205 IDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLE-N 263
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+ P +Y L+ LC+EGK++EA V A MV + +YS +DGY
Sbjct: 264 INPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGY 313
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 3/238 (1%)
Query: 242 RVRPNVHTF--NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V P HTF N +++ + ++ +M EPD ++ ++++ FC ++
Sbjct: 51 HVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVV 110
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
A ++ + + + NT++ G C G++ A F ++ G S +++ L+
Sbjct: 111 LAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILI 170
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
NG C+ G+ +AI + + R P ++I LC V EA D+ V K G+
Sbjct: 171 NGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGK-GI 229
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P +Y L+ G C G++ A+ + EMV + P + Y+ +D KEG V+ A
Sbjct: 230 SPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEA 287
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 1/205 (0%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P + ++ ++ +R A L+++M VE D N II FC G++ A
Sbjct: 56 PHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSG 115
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
++ G + +++T L+ G C G V A+ ++ + +GF G + +LI +C
Sbjct: 116 VSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCK 175
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
A+ +L+ R+ ++ + P Y +I LC++ ++EA + EMVGKG P +
Sbjct: 176 IGETRAAIRLLR-RIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVV 234
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEM 484
YS + G+ G + A L EM
Sbjct: 235 TYSILVSGFCIVGQLNRAIDLLNEM 259
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 68/139 (48%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N L+ + G ++ ++ +M P+ Y++++L+ C+ R++ A +
Sbjct: 406 PDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEF 465
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++++ K +V Y +I G C+ G + A M +G S +VTFE ++ +
Sbjct: 466 FQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFD 525
Query: 365 AGDVDSAILVYNDMCRKGF 383
+ D A + +M +G
Sbjct: 526 KDENDKAEKLVREMIARGL 544
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+AI +Y M EP+ T+ ++I C +V A + ++++K G P + L
Sbjct: 76 TAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGV-SKILKLGYQPNTITLNTL 134
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+KGLC EGK++EAL+ +++ +GF S Y I+G K G A L + + +
Sbjct: 135 MKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSI 194
Query: 490 R 490
R
Sbjct: 195 R 195
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RPNV+TF L+ G + G + + + ++ G + +Y+V++ C+E + EA
Sbjct: 439 IRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEAL 498
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
L M D D V + +I F + E +AE+ REM G+
Sbjct: 499 ALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 120/244 (49%), Gaps = 1/244 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNV T+ L+ R FE+ V EM GC P+ +Y+V++ C E R+ +A +
Sbjct: 175 QPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 234
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L + + D V+Y T++ G C EE F EM + VTF+ L+ +C
Sbjct: 235 LLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFC 294
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G V+ AI V M G + ++I +C + RV +A +L + +G P
Sbjct: 295 RGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLN-DMGSYGCNPDT 353
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
SY ++KGLC + ++A ++ EMV P+ ++ FI ++G +E A ML ++
Sbjct: 354 ISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQ 413
Query: 484 MFEN 487
M E+
Sbjct: 414 MSEH 417
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 145/309 (46%), Gaps = 17/309 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++ + ++ ++ RG V T L+ + R SG+E V
Sbjct: 158 RVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRN----SGFEQAMAVL------------ 201
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D R PN+ T+N ++ G REG + ++ + G +PD SY+ L+ C
Sbjct: 202 DEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCAS 261
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+R + E+L+ EM +KN + V ++ +I FC G + RA + +M G +++
Sbjct: 262 KRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLC 321
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
++N C+ G VD A + NDM G P+ + ++ LC R +A ++L +V
Sbjct: 322 NIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLN-EMV 380
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ P E ++ I LC++G +E+A+ + +M G + Y+A ++G+ +G+++
Sbjct: 381 RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHID 440
Query: 476 MATMLRKEM 484
A L + M
Sbjct: 441 SALELFRSM 449
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 174/398 (43%), Gaps = 42/398 (10%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY--------- 151
C ++ +Y II+ + R + AR+++ L S P + L+K
Sbjct: 209 CTPNIVTYNVIINGMCREGRVDDARELLN-RLPSYGFQPDTVSYTTLLKGLCASKRWDDV 267
Query: 152 ---------RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
+ C FD+LI+ +E+ + ++ + G + + CN +
Sbjct: 268 EELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA---IQVLEQMTEHGCATNTTLCNIV 324
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
I + + V +++ ++ + P+ ++ ++ G R
Sbjct: 325 INSICKQGRVDDAFKLLNDMGSYGCN----------------PDTISYTTVLKGLCRAER 368
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
++ +++ EM R C P+ +++ + + C++ + +A L E+M + VV YN
Sbjct: 369 WDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNA 428
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
++ GFC G + A E FR M + +++T+ L+ G C A +D A + +M R
Sbjct: 429 LVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGD 485
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
P T VL+ C K + EA+++++ ++++ G P +Y L+ G+ ++ E+A
Sbjct: 486 CPPNVVTFNVLVSFFCQKGFLEEAIELVE-QMMEHGCTPNLITYNTLLDGITKDCSSEDA 544
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
L++ +V KG P + +S+ I KE +E A L
Sbjct: 545 LELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQL 582
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 150/353 (42%), Gaps = 41/353 (11%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C SY T++ L RA A++++ +R+ C
Sbjct: 349 CNPDTISYTTVLKGLCRAERWDDAKELLNEMVRN------------------NCPPNEVT 390
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
F+ I C L K + IE + ++ + G +V V T NAL+ + S E++R
Sbjct: 391 FNTFI-CILCQKGL--IEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFR 447
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
+ +PN T+ L+ G + ++ EM R C P
Sbjct: 448 SM-------------------PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPP 488
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+ +++VL++ FC++ + EA +L E+M + +++ YNT++ G + A E
Sbjct: 489 NVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELL 548
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
+ GV +TF ++ + ++ A+ +++ + G P+ ++ LC +
Sbjct: 549 HGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKR 608
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ A+D A +V G P E +Y+ LI+GL EG ++EA + + + +G
Sbjct: 609 CEIDNAIDFF-AYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRG 660
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 4/226 (1%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T+NAL+ GF +G + +++ M C+P+ +Y+ L+ C R+ A +L
Sbjct: 423 VVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVA 479
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
EM + +VV +N ++ FC+ G + A E +M G + +T+ L++G +
Sbjct: 480 EMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDC 539
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
+ A+ + + + KG P+ T +IG L + R+ EA+ + V G+ P Y
Sbjct: 540 SSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHV-VQDIGMRPKAVVY 598
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
++ GLC+ +++ A+ A MV G P+ Y I+G EG
Sbjct: 599 NKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEG 644
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 114/243 (46%), Gaps = 4/243 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TF+ L+ F R G E+ V +M GC + ++++ C++ R+ +A KL
Sbjct: 281 PNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKL 340
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M D ++Y T++ G C A+E EM + + VTF + C+
Sbjct: 341 LNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQ 400
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G ++ AI++ M G T L+ C + + AL++ ++ K P
Sbjct: 401 KGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK----PNTI 456
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L+ GLC +++ A ++ AEM+ P++ ++ + + ++G +E A L ++M
Sbjct: 457 TYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQM 516
Query: 485 FEN 487
E+
Sbjct: 517 MEH 519
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 4/243 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V+ L+ R G V G D ++Y+ L+A +C + A +L
Sbjct: 74 PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 133
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M V D Y +I C+ G +A A +M G + + VT+ L+ CR
Sbjct: 134 IGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ A+ V ++M KG P T V+I +C + RV +A ++L R+ +G P
Sbjct: 191 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLN-RLPSYGFQPDTV 249
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
SY L+KGLC + ++ ++ AEM+ K P+ + I + + G VE A + ++M
Sbjct: 250 SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQM 309
Query: 485 FEN 487
E+
Sbjct: 310 TEH 312
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 9/215 (4%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD Y + L+ C R +A ++ DV AYNT++ G+C G + A
Sbjct: 74 PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAAR-- 131
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
R +G V + T+ L+ C G V A+ + +DM R+G +P T VL+ +C
Sbjct: 132 -RLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+A+ +L K G P +Y +I G+C EG++++A ++ + GF+P
Sbjct: 191 NSGFEQAMAVLDEMRAK-GCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTV 249
Query: 460 IYSAFIDGYMKE---GNVE--MATMLRKEMFENQV 489
Y+ + G +VE A M+ K N+V
Sbjct: 250 SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEV 284
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 90/232 (38%), Gaps = 40/232 (17%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
CK + +Y T++ L A + A +++ LR + P + F VLV + + G
Sbjct: 451 CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRG-DCPPNVVTFNVLVSFFCQKGF---- 505
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR------------ 208
+E +++V +M G + + T N L+ +++
Sbjct: 506 ----------------LEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLH 549
Query: 209 ---GKGVISGYEIYREVFGL----DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
KGV + + G+ D A V + + +RP +N +++G +
Sbjct: 550 GLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRC 609
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ D + M GC P+ +Y +L+ E ++EA+ L + + V
Sbjct: 610 EIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 127/246 (51%), Gaps = 6/246 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+N L+ + + ++VEM+ GC PD +Y+ +++ C+ ++ +A +L
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ V YN +I G C+ G + A + EM +GV+ + V++ ++N C
Sbjct: 237 AGRFKPS-----VPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G+V+ A ++ M +G + T LI + +++EALD+ K +++ G P
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKL-MIQDGCEPNVV 350
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI GLC G +EEAL+V +M G P++ YS IDG+ K G++ A+ M
Sbjct: 351 AYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRM 410
Query: 485 FENQVR 490
+ R
Sbjct: 411 ISHGCR 416
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/484 (24%), Positives = 200/484 (41%), Gaps = 80/484 (16%)
Query: 73 QFSQIALGLKNNPHLA--LRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRV 130
Q S + LK + +L+ L FFS + + +H+ S+Y +I L R D+++
Sbjct: 40 QESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRE----CEMDMVQY 95
Query: 131 ALRSPENDPKL---KLFEVLVKTYRECGSA----------------PFV--FDLLIKCCL 169
L+ + D LF ++ Y+ GSA P V ++ L+ L
Sbjct: 96 ILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALL 155
Query: 170 EVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDS 227
+ I + + GL V T N L+ + + V + ++++ E+ G
Sbjct: 156 SENKFQMINP---LYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPP 212
Query: 228 DAT-----------AGIGKDVKRVV-RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
DA AG D + + R +P+V +NAL+ G +EG E + EM
Sbjct: 213 DAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMD 272
Query: 276 LGCEPDCYSYSVLMAVFC-----------------------------------EERRMRE 300
G +P+ SYS ++ C ++ E
Sbjct: 273 NGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYE 332
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A LW+ M E +VVAYNT+I G C G + A + +M SG + T+ L++
Sbjct: 333 ALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILID 392
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G+ ++GD+ A +N M G P T ++ LC K +F+ + L ++ G
Sbjct: 393 GFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC-KNSMFDQANSLVEKMTLEGCT 451
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P ++ IKGLC G++E A+K+ M G G P++ Y+ +D + E A L
Sbjct: 452 PNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGL 511
Query: 481 RKEM 484
+E+
Sbjct: 512 FQEI 515
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 170/411 (41%), Gaps = 48/411 (11%)
Query: 66 RSGLTPTQFSQI----ALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLI 121
+ GL P F+ AL + A + F +K C +Y T++ L +A I
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG-CPPDAVTYTTMVSSLCKAGKI 230
Query: 122 GPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCV 181
AR++ + P + ++ L+ + G +IE +
Sbjct: 231 DDAREL------AGRFKPSVPVYNALIDGMCKEG--------------------RIEVAI 264
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
++ +M G+ V + + +I + V + ++ ++F DA
Sbjct: 265 KLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDA------------ 312
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
N+HTF L+ G + G + D+W M + GCEP+ +Y+ L+ C + EA
Sbjct: 313 ----NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++ ++M+ +V Y+ +I GF + G++ A E + M G + VT+ +V+
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ D A + M +G P T I LC RV A+ +L+ R+ G P
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLE-RMQGHGCLP 487
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+Y L+ L K EEA + E+ + +P+L Y+ + G+ + G
Sbjct: 488 NITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAG 538
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 136/331 (41%), Gaps = 29/331 (8%)
Query: 152 RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
R C + F LIK C K+ +D+ ++++ G V N LI G
Sbjct: 308 RGCDANIHTFTPLIKGCFMRG---KLYEALDLWKLMIQDGCEPNVVAYNTLI------HG 358
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
+ S + + D +G PNV T++ L+ GF + G + W
Sbjct: 359 LCSNGSLEEALQVCDQMQRSG----------CLPNVTTYSILIDGFAKSGDLVGASETWN 408
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
M GC P+ +Y+ ++ V C+ +A L E+M + + + +NT I G C G
Sbjct: 409 RMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNG 468
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A + M G + T+ L++ R + A ++ ++ + +P T
Sbjct: 469 RVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN 528
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
++ + EAL + +V+ G P +Y +I C++GK +K+ A++V
Sbjct: 529 TVLYGFSRAGMMGEALQLFGKALVR-GTAPDSITYNTMIHAYCKQGK----VKIAAQLVE 583
Query: 452 -----KGFEPSLEIYSAFIDGYMKEGNVEMA 477
K + P + Y++ I G N+E A
Sbjct: 584 RVSSMKEWHPDIITYTSLIWGACNWMNIEEA 614
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 43/237 (18%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F ++ G+ R G+ E+ ++ + GC+P Y+ L+ E + + L+ M+
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ +V YN L+ C+ VD
Sbjct: 172 KDGLIPNVFTYNI-----------------------------------LLKALCKNDRVD 196
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF-PTEKSYMF 428
+A ++ +M KG P+ T ++ LC ++ +A ++ G F P+ Y
Sbjct: 197 AAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELA-------GRFKPSVPVYNA 249
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
LI G+C+EG++E A+K+ EM+ G +P++ YS I+ GNVE+A L +MF
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMF 306
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 2/188 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TFN + G G E + M GC P+ +Y+ L+ + EA L
Sbjct: 452 PNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGL 511
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++E+ +N++ ++V YNT++ GF G M A + F + + G S+T+ +++ YC+
Sbjct: 512 FQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK 571
Query: 365 AGDVD-SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G V +A LV K + P+ T LI C+ + EA+ L + + G+ P
Sbjct: 572 QGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLD-KAINQGICPNF 630
Query: 424 KSYMFLIK 431
++ L++
Sbjct: 631 ATWNALVR 638
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/284 (19%), Positives = 117/284 (41%), Gaps = 40/284 (14%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVI-RVALRSPENDPKLKLFEVLVKTYRECGSAPF 159
C+ ++ +Y ++ +L + + A ++ ++ L P F +K CG+
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCT--PNTITFNTFIKGL--CGNG-- 468
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
++E + ++ + G ++T N L+ + R Y
Sbjct: 469 ----------------RVEWAMKLLERMQGHGCLPNITTYNELLDALFR-------MNKY 505
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
E FGL + A ++PN+ T+N ++ GF R G + ++ + G
Sbjct: 506 EEAFGLFQEIEAR---------NLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTA 556
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH-DVVAYNTIIGGFCEIGEMARAEE 338
PD +Y+ ++ +C++ +++ A +L E + H D++ Y ++I G C + A
Sbjct: 557 PDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMA 616
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
F + G+ + T+ LV + + I + +D+ RKG
Sbjct: 617 FLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660
>gi|356522220|ref|XP_003529745.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g26680, mitochondrial-like, partial [Glycine
max]
Length = 437
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 199/473 (42%), Gaps = 68/473 (14%)
Query: 30 SSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLAL 89
S T P Q +LI ++ H +S W L +L S LTP + + L L+N+ +L
Sbjct: 1 SVTEPRGQDLDLI----TVAHRHVXESHWEKLHTLSTS-LTPFRLKHLLLALRNDLVSSL 55
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKL-KLFEVLV 148
+ ++ ++Y+ P ++ R P L LFE +
Sbjct: 56 KLSNWPN---------TAYSK------------PPKNSSR--------KPSLHTLFESSL 86
Query: 149 KTYRECGSA-PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
+YR C S+ P VFD L + + K ++ G S V +CNA + +
Sbjct: 87 FSYRLCSSSSPLVFDALFN---TLAHTNKFRHATLAYTLMKEHGFSPTVESCNAFMSSLL 143
Query: 208 RGKGVISGYEIYRE----------VFGLD---------SDATAGIGKDVKRVVRV-RPNV 247
+ YRE V+ L+ + G K + V PNV
Sbjct: 144 HLRRADIALAFYREMRRRSCVSPNVYTLNMAIRAYCMLGEVQKGFEMSXKMMGMVLSPNV 203
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
+FN L+ G+ +G F V M G +P+ +++ L+ FC+ER+ EA +++ E
Sbjct: 204 VSFNTLISGYCNKGLFGLALKVKSLMGENGVQPNVVTFNTLINGFCKERKRHEANRVFNE 263
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M+ +V +VV YNT++ G+ ++G+ REM +GV++ +T L+ G C+ G
Sbjct: 264 MKVXHVAPNVVTYNTLLNGYGQVGD--------REMVRNGVKADILTINALILGLCKDGK 315
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
A ++ ++ ST LI LC + I ++ +V+ G P E +
Sbjct: 316 TKKAAGFVRELDKENLVSNXSTFSALITGLCVRNNSERPFLIYRS-MVRSGYSPNEHIFQ 374
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
LI + + ++V +M+G+ P L S DG + G ++A L
Sbjct: 375 MLISAFYKNEDFDGDVQVLRDMLGRLMSPDLSTLSELCDGLCRCGKNQLALAL 427
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%)
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
SS + F+ L N A L Y M GF P + + L RR AL
Sbjct: 95 SSPLVFDALFNTLAHTNKFRHATLAYTLMKEHGFSPTVESCNAFMSSLLHLRRADIALAF 154
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
+ + + P + I+ C G++++ ++ +M+G P++ ++ I GY
Sbjct: 155 YREMRRRSCVSPNVYTLNMAIRAYCMLGEVQKGFEMSXKMMGMVLSPNVVSFNTLISGYC 214
Query: 470 KEGNVEMATMLRKEMFENQVR 490
+G +A ++ M EN V+
Sbjct: 215 NKGLFGLALKVKSLMGENGVQ 235
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 146/294 (49%), Gaps = 17/294 (5%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+E++E + I ++ G + C+ +I E+ + E+ E F L +
Sbjct: 281 MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKK-------ELVEEAFSL----ACKL 329
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
G D+ V PNV +NAL+ + F+ + ++ EMA G EP+ +Y++L+ C
Sbjct: 330 G-DLGMV----PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + +A L+++MRDK ++ V YN++I G+C+ G + RA M G+ ++
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 444
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
++ L+ G CR GD+ S + ++ +M +G T LI C +++ EA + +
Sbjct: 445 SYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD-K 503
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++ + P E ++ +I+G C G + +A ++ +MV G +P Y + I G
Sbjct: 504 MIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 1/245 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +T + ++ + F D++ +M + G D Y Y+ + +CE R + A L
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M + V+ V YN ++ G C+ + A E M GV + VT+ LV G+CR
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+++ A+ + +DM R GF P + +I EL K V EA L ++ G+ P +
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS-LACKLGDLGMVPNVFA 340
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI LC+ + ++A ++ EM G+G EP+ Y+ I K G +E A L +M
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400
Query: 486 ENQVR 490
+ ++
Sbjct: 401 DKGIK 405
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 115/222 (51%), Gaps = 1/222 (0%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
++ LG P+ ++Y+ L+ C+ R +A++L++EM + +E + V Y +I C+ G
Sbjct: 328 KLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 387
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A F +M G++ + + L+NGYC+ G +D A + + M ++G P ++
Sbjct: 388 MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 447
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
LI LC + ++ L + + G+ ++ LI G C++ KM+EA ++ +M+
Sbjct: 448 PLIAGLCRNGDLSSCME-LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 506
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
P+ ++ I+GY GN+ A L +M E ++ ++
Sbjct: 507 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 122/247 (49%), Gaps = 2/247 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N + AL+ GF+REG F + +W EMA G + D S+++++ ++ ++ L+
Sbjct: 582 NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 641
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM+++ V+ D + Y +I + M +A + +M + G ++VT L+N C++
Sbjct: 642 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKS 701
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + SA L+ +M P T + + + +A D+ A + G + S
Sbjct: 702 GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ--GHLASIVS 759
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+ LIKGLC+ GK++EA+ + +++ GF P YS I K G++ A L EM
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819
Query: 486 ENQVRQE 492
++ +
Sbjct: 820 YKGLKPD 826
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 150/331 (45%), Gaps = 20/331 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+V+ I+ E +N++ V VRM S G+ N L++ + + V E+
Sbjct: 199 YVYTAGIRAYCESRNLDGARGLV--VRM-ESEGVKASAVPYNVLMYGLCKNMRVQEAVEV 255
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
K+V + V + T+ L+ GF R E + +M RLG
Sbjct: 256 ----------------KNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF 299
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P + S ++ ++ + EA L ++ D + +V AYN +I C+ A+
Sbjct: 300 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 359
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F+EM G+E + VT+ L++ C+ G ++ A+ +++ M KG + LI C
Sbjct: 360 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYC 419
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ + A +L +VK GL PT SY LI GLC G + +++ EM +G +
Sbjct: 420 KQGSLDRARGLLSG-MVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN 478
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++A I+G+ K+ ++ A L +M ++ V
Sbjct: 479 YTFTALINGFCKDKKMDEAARLFDKMIDSNV 509
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 2/225 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+ + ++ +E + + W +M G P+ +++VL+ C+ + AE
Sbjct: 649 VKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAE 708
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM NV + YN + F G+M +A++ M L G +S V+F L+ G
Sbjct: 709 LLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGL 767
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+AG + AI + + + GF P+ + +I ELC + +A ++ + K GL P
Sbjct: 768 CKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK-GLKPD 826
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+Y I+ G+ ++AL + M+ G +P+ + Y A + G
Sbjct: 827 VVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 140/313 (44%), Gaps = 17/313 (5%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+ +C+++ R + RG++ T ALI + K + ++ ++ +DS+
Sbjct: 459 LSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM--IDSN-------- 508
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
V PN TFN ++ G+ G K ++ +M +G +PD Y+Y L++ C
Sbjct: 509 ------VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ +A + ++ + + + ++ GF G + EM + GV+ V+F
Sbjct: 563 GVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFT 622
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
+V + D + + +++ +M +G +P+ +I L + + +AL+ VV
Sbjct: 623 IIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVD 682
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G P ++ LI LC+ G + A + EM+ P+ Y+ F+D + EG++E
Sbjct: 683 -GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEK 741
Query: 477 ATMLRKEMFENQV 489
A L M + +
Sbjct: 742 AKDLHSAMLQGHL 754
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ +FN L+ G + G ++ D+ ++ G PDC SYS ++ C+ + +A +LW
Sbjct: 756 SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELW 815
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEI-GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM K ++ DVVAYN I +C + GE +A + M SGV+ + T+ L++G
Sbjct: 816 NEMLYKGLKPDVVAYNIFI-RWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI-- 872
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
S +L Y+ C +G + I++ + EL D
Sbjct: 873 -----SLMLHYDFSCFRGTK---QYIQISVYELMD 899
>gi|356523408|ref|XP_003530332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Glycine max]
Length = 577
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 213/492 (43%), Gaps = 54/492 (10%)
Query: 23 LSQF-STSSSTPPSDQSHNLIAT-------VVSLLTHHRSKSRW-NHLLSLCRS-GLTPT 72
++QF + +S T D H A V + R+K RW + LLS S
Sbjct: 21 IAQFRNLTSETKNGDHEHPTKALDAKDCNFVYEICRITRTKPRWEDTLLSQYPSFNFKDP 80
Query: 73 QFSQIALGLKNNPHLALRFFSFTQHKSLCKH-SLSSYATIIHILSRARLIGPARDVIRVA 131
F + L +NN L+LRFF + LC S + ++L + + A + +
Sbjct: 81 SFFLLYLKHQNNAFLSLRFFHW-----LCSSCGFSPDQSSCNVLFQVLVDAGAGKLAKSL 135
Query: 132 LRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKC---------------CLEVKNIEK 176
L SP P+ E ++ G D+L + CL + +
Sbjct: 136 LDSPGFTPEPASLEGYIQCLSGAGMVEDAVDMLKRVVFCPSVATWNASLLGCLRARRTDL 195
Query: 177 IETCVDIVRMLMSRGL--SVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
+ T + +M G+ S+ V T LI V+ GYE+ +E+ G+
Sbjct: 196 VWT---LYEQMMESGVVASINVETVGYLIMAFCAEYKVLKGYELLKELL------ENGLC 246
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
D NV FN L+ GF +EG +++V ++ M C PD +Y ++ +
Sbjct: 247 PD---------NV-VFNELIRGFCKEGQYDRVSEILHIMIAKQCNPDVSTYQEIIYGLLK 296
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ E +++ +++D+ D V Y T+I G CE+ + A + + EM G + + T
Sbjct: 297 MKN-SEGFQVFNDLKDRGYFPDRVMYTTVIKGLCEMQRLGEARKLWFEMIKKGFQPNEYT 355
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ +++GYC+ GD+ A ++ DM +G+ + +I LC R EA + +
Sbjct: 356 YNVMMHGYCKIGDLAEARKIFEDMRDRGYAETTVSYGTMISGLCLHGRTDEAQSLFEEMF 415
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
K G+ P +Y LIK LC+E K+ +A K+ ++ +G E S+ +S I GN
Sbjct: 416 QK-GIVPDLITYNCLIKALCKEVKIVKARKLLNLLLAQGLELSVFSFSPLIKQLCIVGNT 474
Query: 475 EMATMLRKEMFE 486
+ A L K+M +
Sbjct: 475 KGAITLWKDMHD 486
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 9/265 (3%)
Query: 231 AGIGKD----VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG--CEPDCYS 284
AG+ +D +KRVV P+V T+NA ++G R + V ++ +M G + +
Sbjct: 158 AGMVEDAVDMLKRVVFC-PSVATWNASLLGCLRARRTDLVWTLYEQMMESGVVASINVET 216
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
L+ FC E ++ + +L +E+ + + D V +N +I GFC+ G+ R E M
Sbjct: 217 VGYLIMAFCAEYKVLKGYELLKELLENGLCPDNVVFNELIRGFCKEGQYDRVSEILHIMI 276
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
T++ ++ G + + + V+ND+ +G+ P+ +I LC+ +R+
Sbjct: 277 AKQCNPDVSTYQEIIYGLLKMKNSE-GFQVFNDLKDRGYFPDRVMYTTVIKGLCEMQRLG 335
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
EA L ++K G P E +Y ++ G C+ G + EA K+ +M +G+ + Y
Sbjct: 336 EARK-LWFEMIKKGFQPNEYTYNVMMHGYCKIGDLAEARKIFEDMRDRGYAETTVSYGTM 394
Query: 465 IDGYMKEGNVEMATMLRKEMFENQV 489
I G G + A L +EMF+ +
Sbjct: 395 ISGLCLHGRTDEAQSLFEEMFQKGI 419
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 80/209 (38%), Gaps = 55/209 (26%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN +T+N +M G+ + G + ++ +M G SY +++ C R EA+
Sbjct: 350 QPNEYTYNVMMHGYCKIGDLAEARKIFEDMRDRGYAETTVSYGTMISGLCLHGRTDEAQS 409
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCE---------------------------------- 329
L+EEM K + D++ YN +I C+
Sbjct: 410 LFEEMFQKGIVPDLITYNCLIKALCKEVKIVKARKLLNLLLAQGLELSVFSFSPLIKQLC 469
Query: 330 -IGEMARAEEFFREM---------GLSGVE-----------SSSVTFEHLVNGYCRAGDV 368
+G A +++M + G+E TFE+L+N + +
Sbjct: 470 IVGNTKGAITLWKDMHDRLLEPTASIFGIEWLLNMLSWKQKPQKQTFEYLINSLSQENRL 529
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
D ++V + M R G+ E TI L+ +
Sbjct: 530 DDILVVLDFMFRIGYILEKGTIYSLVSKF 558
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 161/336 (47%), Gaps = 22/336 (6%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALI---------------WEVSRGKGV--ISGYEIY 219
+++ + ++ GL + VS N+LI W+ + G+ I+ Y I
Sbjct: 315 VDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIM 374
Query: 220 REVF---GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+ G+ S+AT + K ++ P+ TF L+ G G + ++ +
Sbjct: 375 TKGLLDSGMVSEATELL-KQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNS 433
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G E D +SYS ++ FC++ R +A ++++ M + + YN +I GFC + ++ A
Sbjct: 434 GEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDA 493
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ + EM +G + +T+ L++G C+A A + +M +GF+P+ T LI
Sbjct: 494 IKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRG 553
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC ++V AL I ++ GL + LI GLC GK++EA + EM K P
Sbjct: 554 LCRDKKVDVALRIWD-EILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSP 612
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+L Y+ +DG+ + G+++ A L + +N ++ +
Sbjct: 613 NLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPD 648
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 114/233 (48%), Gaps = 1/233 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN H +NAL+ GF R +++EM GC P +Y+ L+ C+ + +EA
Sbjct: 471 KPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASS 530
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +EM ++ + D+ Y ++I G C ++ A + E+ +G++ + L++G C
Sbjct: 531 LTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLC 590
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
AG VD A +Y +M K P T L+ + + +A + A ++ GL P
Sbjct: 591 SAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTA-ILDNGLKPDI 649
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
+Y IKGLC + E + + E++ G P++ +S + +K G +++
Sbjct: 650 VTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQI 702
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 120/280 (42%), Gaps = 35/280 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ T++ LM G + + D+ EM G + D Y+ L++ +A
Sbjct: 189 VAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAM 248
Query: 303 KLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+WE++ RD ++ Y ++ G C++G A E + M + ++ +VT+ L++G
Sbjct: 249 KVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHG 308
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC----------------------- 398
CR+GDVDSA VY+DM + G + S LI C
Sbjct: 309 LCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQI 368
Query: 399 -----------DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
D V EA ++LK P + ++ LI GLCE G A ++
Sbjct: 369 TTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILE 428
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ G E + YS+ I+ + K+G A + K M ++
Sbjct: 429 DARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKD 468
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 113/244 (46%), Gaps = 1/244 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V ++++++ F ++G +V+ M + GC+P+ + Y+ L+ FC ++ +A K++
Sbjct: 438 DVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIY 497
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM ++ YNT+I G C+ + A +EM G + T+ L+ G CR
Sbjct: 498 IEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRD 557
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
VD A+ +++++ G + + +LI LC +V EA I K P +
Sbjct: 558 KKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEK-NCSPNLVT 616
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y L+ G E G +++A + ++ G +P + Y+ I G +L E+
Sbjct: 617 YNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVL 676
Query: 486 ENQV 489
+
Sbjct: 677 ATGI 680
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 101/216 (46%), Gaps = 6/216 (2%)
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR----DKNVEHDVVAYNTIIGGFCEIG 331
LGC P S++ L+ F RR +A+ + + + + ++ YN I+ C G
Sbjct: 113 LGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARG 172
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
++ RA F + GV VT+ L++G + +D+A+ + ++M G + +
Sbjct: 173 DVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYN 232
Query: 392 VLIGELCDKRRVFE-ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
L+ C + +FE A+ + + V G P +Y ++ GLC+ G+ +EA +V + M+
Sbjct: 233 ALLSG-CFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMM 291
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ Y I G + G+V+ A + +M +
Sbjct: 292 ANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVK 327
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 6/177 (3%)
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREM--GLSG--VESSSVTFEHLVNGYCRAGDVDSAI 372
V ++NT++ F + A+ FF + G G + + T+ ++ C GDVD A+
Sbjct: 119 VRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAV 178
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+++ + R+G P+ T L+ L ++ ALD+L + +G+ Y L+ G
Sbjct: 179 SLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLD-EMPNYGVQADAVCYNALLSG 237
Query: 433 LCEEGKMEEALKVQAEMV-GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
G E+A+KV ++V G P+L Y +DG K G + A + M N
Sbjct: 238 CFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANN 294
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 146/294 (49%), Gaps = 17/294 (5%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+E++E + I ++ G + C+ +I E+ + E+ E F L +
Sbjct: 304 MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKK-------ELVEEAFSL----ACKL 352
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
G D+ V PNV +NAL+ + F+ + ++ EMA G EP+ +Y++L+ C
Sbjct: 353 G-DLGMV----PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 407
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + +A L+++MRDK ++ V YN++I G+C+ G + RA M G+ ++
Sbjct: 408 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 467
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
++ L+ G CR GD+ S + ++ +M +G T LI C +++ EA + +
Sbjct: 468 SYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD-K 526
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++ + P E ++ +I+G C G + +A ++ +MV G +P Y + I G
Sbjct: 527 MIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 580
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 1/245 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +T + ++ + F D++ +M + G D Y Y+ + +CE R + A L
Sbjct: 185 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 244
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M + V+ V YN ++ G C+ + A E M GV + VT+ LV G+CR
Sbjct: 245 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 304
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+++ A+ + +DM R GF P + +I EL K V EA L ++ G+ P +
Sbjct: 305 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS-LACKLGDLGMVPNVFA 363
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI LC+ + ++A ++ EM G+G EP+ Y+ I K G +E A L +M
Sbjct: 364 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 423
Query: 486 ENQVR 490
+ ++
Sbjct: 424 DKGIK 428
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 115/222 (51%), Gaps = 1/222 (0%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
++ LG P+ ++Y+ L+ C+ R +A++L++EM + +E + V Y +I C+ G
Sbjct: 351 KLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 410
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A F +M G++ + + L+NGYC+ G +D A + + M ++G P ++
Sbjct: 411 MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 470
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
LI LC + ++ L + + G+ ++ LI G C++ KM+EA ++ +M+
Sbjct: 471 PLIAGLCRNGDLSSCME-LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 529
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
P+ ++ I+GY GN+ A L +M E ++ ++
Sbjct: 530 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 571
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 122/247 (49%), Gaps = 2/247 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N + AL+ GF+REG F + +W EMA G + D S+++++ ++ ++ L+
Sbjct: 605 NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 664
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM+++ V+ D + Y +I + M +A + +M + G ++VT L+N C++
Sbjct: 665 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKS 724
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + SA L+ +M P T + + + +A D+ A + G + S
Sbjct: 725 GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ--GHLASIVS 782
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+ LIKGLC+ GK++EA+ + +++ GF P YS I K G++ A L EM
Sbjct: 783 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 842
Query: 486 ENQVRQE 492
++ +
Sbjct: 843 YKGLKPD 849
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 150/331 (45%), Gaps = 20/331 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+V+ I+ E +N++ V VRM S G+ N L++ + + V E+
Sbjct: 222 YVYTAGIRAYCESRNLDGARGLV--VRM-ESEGVKASAVPYNVLMYGLCKNMRVQEAVEV 278
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
K+V + V + T+ L+ GF R E + +M RLG
Sbjct: 279 ----------------KNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF 322
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P + S ++ ++ + EA L ++ D + +V AYN +I C+ A+
Sbjct: 323 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 382
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F+EM G+E + VT+ L++ C+ G ++ A+ +++ M KG + LI C
Sbjct: 383 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYC 442
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ + A +L +VK GL PT SY LI GLC G + +++ EM +G +
Sbjct: 443 KQGSLDRARGLLSG-MVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN 501
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++A I+G+ K+ ++ A L +M ++ V
Sbjct: 502 YTFTALINGFCKDKKMDEAARLFDKMIDSNV 532
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 2/225 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+ + ++ +E + + W +M G P+ +++VL+ C+ + AE
Sbjct: 672 VKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAE 731
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +EM NV + YN + F G+M +A++ M L G +S V+F L+ G
Sbjct: 732 LLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGL 790
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+AG + AI + + + GF P+ + +I ELC + +A ++ + K GL P
Sbjct: 791 CKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK-GLKPD 849
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+Y I+ G+ ++AL + M+ G +P+ + Y A + G
Sbjct: 850 VVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 894
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 140/313 (44%), Gaps = 17/313 (5%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+ +C+++ R + RG++ T ALI + K + ++ ++ +DS+
Sbjct: 482 LSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM--IDSN-------- 531
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
V PN TFN ++ G+ G K ++ +M +G +PD Y+Y L++ C
Sbjct: 532 ------VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 585
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ +A + ++ + + + ++ GF G + EM + GV+ V+F
Sbjct: 586 GVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFT 645
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
+V + D + + +++ +M +G +P+ +I L + + +AL+ VV
Sbjct: 646 IIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVD 705
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G P ++ LI LC+ G + A + EM+ P+ Y+ F+D + EG++E
Sbjct: 706 -GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEK 764
Query: 477 ATMLRKEMFENQV 489
A L M + +
Sbjct: 765 AKDLHSAMLQGHL 777
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 122/250 (48%), Gaps = 3/250 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG--CEPDCYSYSVLMAVFCEERRMREAE 302
P+V ++N L+ G E ++ ++ MA G C PD SYS ++ +E +A
Sbjct: 167 PHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAY 226
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EM ++ + DVV YNTI+ C+ M +A + M +GV +T+ +V+GY
Sbjct: 227 STYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGY 286
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +G AI + MC G EP+ T L+ LC R EA IL + ++K GL P
Sbjct: 287 CSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDS-MIKRGLKPN 345
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G +G + E + MV G +P ++S I K NV++A +
Sbjct: 346 VITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFS 405
Query: 483 EMFENQVRQE 492
+M + ++ +
Sbjct: 406 KMRQQRLTPD 415
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 134/266 (50%), Gaps = 8/266 (3%)
Query: 231 AGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE-MARLGCEPDCYSYSVLM 289
AG+G +K+ RV P + F L+ E ++ + M LGC P +SY++L+
Sbjct: 119 AGLGNVIKKGYRVEPII--FTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILL 176
Query: 290 AVFCEERRMREAEKLWEEMRDK--NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
C E R +EA +L M D + DVV+Y+TII G + G+ +A + EM G
Sbjct: 177 KGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERG 236
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ VT+ +V C+A +D A+ V N M + G P+ T ++ C + EA+
Sbjct: 237 ILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAI 296
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
IL+ ++ G+ P +Y L+ LC+ G+ EA K+ M+ +G +P++ YS + G
Sbjct: 297 GILE-KMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHG 355
Query: 468 YMKEGN-VEMATMLRKEMFENQVRQE 492
Y +G VEM +L M N ++ +
Sbjct: 356 YATKGALVEMRDLL-DLMVRNGIQPD 380
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 2/173 (1%)
Query: 237 VKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+ R+V+ V P+ T+N+++ G+ G ++ + +M G EPD +Y+ LM C+
Sbjct: 264 LNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCK 323
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R EA K+ + M + ++ +V+ Y+T++ G+ G + + M +G++
Sbjct: 324 NGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHV 383
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
F L+ + +VD A+ V++ M ++ P+ T LI LC RV +A+
Sbjct: 384 FSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDAM 436
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 9/184 (4%)
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
+R N VA ++ MAR+ + V + T+ L+ CRAG
Sbjct: 61 IRSLNRALAAVARDSPAAAVSGFNRMARSSD-------GAVTPTLHTYGILIGCCCRAGR 113
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+D ++ +KG+ E L+ LC ++R A++I+ R+ + G P SY
Sbjct: 114 LDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYN 173
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFE--PSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
L+KGLC E + +EAL++ M G + P + YS IDG KEG+ + A EM
Sbjct: 174 ILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEML 233
Query: 486 ENQV 489
E +
Sbjct: 234 ERGI 237
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 124/239 (51%), Gaps = 1/239 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV +FN +M G + G ++V +W M G D +Y +L+ FC+ ++ +
Sbjct: 58 NVASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVL 117
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E + + D AY+ +I G C++G++ +A M SG + ++ + L+NG A
Sbjct: 118 EIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGA 177
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+ AI V+ ++ + P T LI LC R EA D++K + K G P+ +
Sbjct: 178 SKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEK-GWNPSVIT 236
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LIKGLC++ K+E AL++ +++ KGF+P +++++ I G G E A+ L +M
Sbjct: 237 YSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDM 295
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 1/178 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + T+N L+ G + F + D+ EM G P +YS+L+ C++ ++ A +L
Sbjct: 197 PTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQL 256
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W ++ K + DV +N +I G C +G+ A E + +M + VT+ L+ G+ +
Sbjct: 257 WNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYK 316
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
GD +A++++ + R G P+ + + + LC R+ A+ L V K + PT
Sbjct: 317 GGDTRNALVIWARILRNGLLPDIISYNITLKGLCACNRISVAILFLNDAVTK-NIVPT 373
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 1/215 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN +NAL+ G FE V+ E+ C P +Y+ L+ C+ R EA
Sbjct: 161 KPNTQVYNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYD 220
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +EM +K V+ Y+ +I G C+ ++ A + + ++ G + L++G C
Sbjct: 221 LVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLC 280
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G + A +Y DM P T L+ AL ++ AR+++ GL P
Sbjct: 281 SVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNAL-VIWARILRNGLLPDI 339
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
SY +KGLC ++ A+ + V K P++
Sbjct: 340 ISYNITLKGLCACNRISVAILFLNDAVTKNIVPTV 374
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 97/192 (50%), Gaps = 2/192 (1%)
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
CE + AE++++EM + + D V YN ++ GF + G + + + MG G + +
Sbjct: 1 CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSRNVA 60
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
+F ++ G G+VD ++ M GF + +T +L+ C ++L +L+
Sbjct: 61 -SFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEI 119
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ G +Y +I GLC+ GK+++A+ V M+ G +P+ ++Y+A I+G +
Sbjct: 120 AKQEGGALDA-FAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGAS 178
Query: 473 NVEMATMLRKEM 484
E A + KE+
Sbjct: 179 KFEDAIRVFKEL 190
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 112/269 (41%), Gaps = 32/269 (11%)
Query: 99 SLCKHSLSSYATIIHILSRARLIGPARD------VIRVALRSPENDPKLKLFEVLVKTYR 152
CK+ ++ + +H+L A+ G A D +I + + D + + ++++
Sbjct: 103 GFCKNGYNNKS--LHVLEIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIES-- 158
Query: 153 ECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
C V++ LI L K E + + + L +R S + T N LI + +G+
Sbjct: 159 GCKPNTQVYNALINGLLGA---SKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERF 215
Query: 213 ISGYEIYREVF--GLDSDATA------GIGKDVK---------RVVR--VRPNVHTFNAL 253
Y++ +E+ G + G+ +D K +V+ +P+V N L
Sbjct: 216 AEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNIL 275
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ G G E +++ +M C P+ +Y+ LM F + R A +W + +
Sbjct: 276 IHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGL 335
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
D+++YN + G C ++ A F +
Sbjct: 336 LPDIISYNITLKGLCACNRISVAILFLND 364
>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Glycine max]
Length = 819
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 214/495 (43%), Gaps = 46/495 (9%)
Query: 16 PKPKPQ--LLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTP-T 72
P+P P LLS + S ++ + +S+L H S + +L + TP +
Sbjct: 8 PRPPPHVVLLSMLMRLCAFKLSFKAIHKQNPTLSILWHPFSSATR----ALSNTPFTPPS 63
Query: 73 QFS-----QIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDV 127
FS Q L NNP AL FF+ +H H++S+YA II ILS L R +
Sbjct: 64 SFSTFDVLQTLHHLHNNPSHALSFFTHLRHTGF-SHTISTYAAIIKILSFWNL---QRQL 119
Query: 128 IRVALRSPENDPKL----------KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKI 177
+ L D LF+ +++ F+ +K C+ + +K
Sbjct: 120 DTLFLHLINRDHPPLPFPLLNLFETLFQDFNTSHKNNYFLLRAFNGFVKTCVSLNMFDK- 178
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
+D + RG+ V TCN L + V +Y ++
Sbjct: 179 --AIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQL--------------- 221
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
KR + PN +T+ ++ ++G ++ V+ EM R+G P Y ++ + C R
Sbjct: 222 KRFGFI-PNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHR 280
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
++ + R N +V AY ++ GFC ++ A+ F +M GV +
Sbjct: 281 SDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSS 340
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++GYC++ ++ A+ ++++M +G + + ++ L + E +D K + +
Sbjct: 341 LIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFK-ELKES 399
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G+F +Y + LC GK+E+A+++ EM K ++ Y+ I+GY +G++ A
Sbjct: 400 GMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTA 459
Query: 478 TMLRKEMFENQVRQE 492
+ KEM E ++ +
Sbjct: 460 FNMFKEMKEKGLKPD 474
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 155/375 (41%), Gaps = 74/375 (19%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
VFD L C+ + K+E V++V + S+ L + V LI +++ + ++
Sbjct: 411 VFDAL---CM----LGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMF 463
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
+E+ + ++P++ T+N L G R G + + M G +
Sbjct: 464 KEM----------------KEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMK 507
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI--------- 330
P+ ++ +++ C ++ EAE + + DKN+E Y+ ++ G+CE
Sbjct: 508 PNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIE----IYSAMVNGYCETDLVKKSYEV 563
Query: 331 -------GEMARAEEFFR-------------------EMGLSGVESSSVTFEHLVNGYCR 364
G+MA+ F+ M LS VE S + + ++ C+
Sbjct: 564 FLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQ 623
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI--------LKARVVK 416
AGD+ +A +++ +GF P+ T ++I C + EA D+ +K V+
Sbjct: 624 AGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVIT 683
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEE-ALKVQA---EMVGKGFEPSLEIYSAFIDGYMKEG 472
F + +L K GK + +L V +M P + Y+ +DG+MK
Sbjct: 684 FTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTD 743
Query: 473 NVEMATMLRKEMFEN 487
N + A L +M E+
Sbjct: 744 NFQQAVSLFDKMIES 758
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 12/251 (4%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ ++A++ G+ +K +V++++ G S L++ C + +A KL
Sbjct: 540 NIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLL 599
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M NVE + Y+ I+ C+ G+M A F G VT+ ++N YCR
Sbjct: 600 DRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRM 659
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLI-GELCD----------KRRVFEA-LDILKAR 413
+ A ++ DM R+G +P+ T VL+ G L + KR+ + +
Sbjct: 660 NCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRD 719
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+ + + P Y L+ G + ++A+ + +M+ G EP Y+A + G G+
Sbjct: 720 MEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGH 779
Query: 474 VEMATMLRKEM 484
VE A L EM
Sbjct: 780 VEKAVTLLNEM 790
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 30/250 (12%)
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G +V D + E+ G D +Y+++ C ++ +A ++ EEM+ K + DV Y
Sbjct: 384 GMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHY 443
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
T+I G+C G++ A F+EM G++ VT+ L G R G + + + M
Sbjct: 444 TTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMES 503
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEA------------------------LDILKA---- 412
+G +P +T +++I LC +V EA D++K
Sbjct: 504 QGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIEIYSAMVNGYCETDLVKKSYEV 563
Query: 413 --RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+++ G + S L+ LC G +E+A+K+ M+ EPS +YS + +
Sbjct: 564 FLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQ 623
Query: 471 EGNVEMATML 480
G+++ A L
Sbjct: 624 AGDMKNARTL 633
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 167/386 (43%), Gaps = 50/386 (12%)
Query: 56 SRWNHLLSLCRSGLTP--TQFSQIALGLKNNPHL--ALRFFSFTQHKSLCKHSLSSYATI 111
+ +N + GL P ++ +A GL N H ++ F + + + +S + I
Sbjct: 458 TAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMII 517
Query: 112 IHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEV 171
+ S +++ V S E D ++++ +V Y E +++ +K L
Sbjct: 518 EGLCSGGKVLEA-----EVYFNSLE-DKNIEIYSAMVNGYCETDLVKKSYEVFLKL-LNQ 570
Query: 172 KNIEKIETCVDIV-RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDAT 230
++ K +C ++ ++ M+ + V + ++ ++ Y ++ L +
Sbjct: 571 GDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIM-----YSKI--LAALCQ 623
Query: 231 AGIGKDVKRVVRV------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
AG K+ + + V P+V T+ ++ + R ++ D++ +M R G +PD +
Sbjct: 624 AGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVIT 683
Query: 285 YSVLMAVFCEE---RRM-----REAEKLW-----EEMRDKNVEHDVVAYNTIIGGFCEIG 331
++VL+ +E +R R+ L+ +M + DVV Y ++ G +
Sbjct: 684 FTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTD 743
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+A F +M SG+E ++T+ LV+G C G V+ A+ + N+M KG P+ I
Sbjct: 744 NFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIIS 803
Query: 392 VLIGELCDKRRVFEALDILKARVVKF 417
L KR I+KAR V+F
Sbjct: 804 AL------KR------GIIKARKVQF 817
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 159/319 (49%), Gaps = 14/319 (4%)
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
ET + I+ +L G + K++ ++ ++ + KG+ +++ V +DS AGI ++
Sbjct: 46 ETHLKIIEIL---GRASKLNHARCILLDMPK-KGLEWDEDLW--VLMIDSYGKAGIVQES 99
Query: 238 KRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
++ + V + +++AL R G + + + +M G EP ++++V+M
Sbjct: 100 VKMFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWG 159
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
F ++ A + +E+M+ + + DVV YNT++ G+C + +M AE++F EM +E +
Sbjct: 160 FFLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
VT+ L+ GY VD A+ +M G +P T L+ LC+ ++ EA ILK
Sbjct: 220 VVTYTTLIKGYVSVDRVDDALRFVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILK 279
Query: 412 ARVVKFGLFPTEKS-YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
V K+ + PT+ S +M LI G C+ G ++ A V M+ Y I+ Y K
Sbjct: 280 EMVDKY-IAPTDNSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCK 338
Query: 471 EGNVEMATMLRKEMFENQV 489
G + A L ++ E +
Sbjct: 339 AGEYDKAIKLLDKVIEKDI 357
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 104/487 (21%), Positives = 181/487 (37%), Gaps = 123/487 (25%)
Query: 82 KNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPAR----DVIRVALRSPEN 137
KN+ H AL+FF + + +L +H+ ++ II IL RA + AR D+ + L E+
Sbjct: 23 KNSEH-ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDED 81
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
L+ +++ +Y + G ++ V + + + G+ +
Sbjct: 82 -----LWVLMIDSYGKAGI--------------------VQESVKMFQKMEELGVERTIK 116
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
+ +AL + R + + ++ + GI P HTFN +M GF
Sbjct: 117 SYDALFKVILRRGRYMMAKRYFNKML------SEGI----------EPTRHTFNVMMWGF 160
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G E + +M PD +Y+ ++ +C ++M EAEK + EM+ +N+E V
Sbjct: 161 FLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTV 220
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREM-----------------GLSGVE----------- 349
V Y T+I G+ + + A F EM GL E
Sbjct: 221 VTYTTLIKGYVSVDRVDDALRFVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKE 280
Query: 350 --------SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
+ + F L++G C+AGD+D+A V M R E VLI C
Sbjct: 281 MVDKYIAPTDNSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAG 340
Query: 402 RVFEALDILKARVVK-FGLFPTEKSYM--------------------------------- 427
+A+ +L + K L P +M
Sbjct: 341 EYDKAIKLLDKVIEKDIILRPQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGV 400
Query: 428 -------FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
LI+G +EG + A ++ M+ + + Y + + Y+K+ A
Sbjct: 401 QDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEQSAYDSLVQSYLKKNEPADAKAA 460
Query: 481 RKEMFEN 487
M EN
Sbjct: 461 LDSMIEN 467
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 110/229 (48%), Gaps = 7/229 (3%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
+ ++M + G E D + +++ + + ++E+ K++++M + VE + +Y+ +
Sbjct: 67 ILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVIL 126
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
G A+ +F +M G+E + TF ++ G+ +G V++A + DM + P+
Sbjct: 127 RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVV 186
Query: 389 TIEVLIGELCDKRRVFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
T ++ C +++ EA +K R ++ PT +Y LIKG ++++AL+
Sbjct: 187 TYNTMVNGYCRVKKMEEAEKYFVEMKGRNIE----PTVVTYTTLIKGYVSVDRVDDALRF 242
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
EM G G +P+ YS + G + A + KEM + + D
Sbjct: 243 VEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDN 291
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 196/469 (41%), Gaps = 51/469 (10%)
Query: 37 QSHNLIAT---VVSLLTHH--RSKSRWNHLLSLCRSGLTPTQFSQI--ALGLKNNPHLAL 89
Q HNL + + S+L H +S+ + L R LTP ++ + A N+ AL
Sbjct: 159 QKHNLCFSYELLYSILIHALGQSEKLYEAFLLSQRQNLTPLTYNALISACARNNDLEKAL 218
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVK 149
+ + +Y+ II L R + A +L K
Sbjct: 219 NLITRMRQDGY-PSDFVNYSLIIRSLMRKNRVDSA---------------------ILQK 256
Query: 150 TYRE--CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
YRE C L + + ++ + ++ GLSVK +T A+IW +
Sbjct: 257 LYREIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALG 316
Query: 208 RGKGVISGYEIYREVFG-------------LDSDATAGIGKDVKRVVR------VRPNVH 248
+ I+ E+ L AG+ KD + VV V PN
Sbjct: 317 NCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQ 376
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T++ L+ + G +E V EM +P+ Y +S +++ + ++ +++ ++ EM
Sbjct: 377 TYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREM 436
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ V D V YN +I F + + A F M G+E +VT+ L++ +CRAG
Sbjct: 437 ENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKH 496
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D A ++ +M G+ P +T ++I D+ R + ++L A + GL P +Y
Sbjct: 497 DRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLL-AHMRSQGLVPNSVTYTT 555
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
LI + G+ +A++ +M G +PS +Y+A I+ Y + G E A
Sbjct: 556 LIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQA 604
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 113/246 (45%), Gaps = 3/246 (1%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA--EKLWE 306
T+NAL+ R EK ++ M + G D +YS+++ + R+ A +KL+
Sbjct: 200 TYNALISACARNNDLEKALNLITRMRQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYR 259
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
E+ +E DV N II GF + G++++A EF + SG+ + T ++ G
Sbjct: 260 EIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCG 319
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
A ++ +M G +P L+ K + + + + + + + G+ P E++Y
Sbjct: 320 RTVEAEAIFEEMRDNGLKPRTRAYNALLRGYV-KAGLLKDAEFVVSEMERSGVSPNEQTY 378
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
FLI G+ E A V EM +P+ ++S + Y +G + + + +EM
Sbjct: 379 SFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMEN 438
Query: 487 NQVRQE 492
+ VR +
Sbjct: 439 SGVRPD 444
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 1/214 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+N L+ R G ++ E+++ EM G P ++++++ F ++ R + +
Sbjct: 476 IEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVK 535
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L MR + + + V Y T+I + + G A E +M +G++ SS + L+N Y
Sbjct: 536 NLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAY 595
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G + A+ + M G +P + LI + RR EA +L+ + + L P
Sbjct: 596 AQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQ-YMKENDLKPD 654
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+Y L+K L K ++ V EM+ G P
Sbjct: 655 VVTYTTLMKALIRVEKFDKVPSVYEEMILSGCTP 688
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 5/232 (2%)
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G EK+ + ++ R P +Y+ L++ + +A L MR D V Y
Sbjct: 179 GQSEKLYEAFLLSQRQNLTP--LTYNALISACARNNDLEKALNLITRMRQDGYPSDFVNY 236
Query: 321 NTIIGGFCEIGEMARA--EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+ II + A ++ +RE+ +E ++ G+ +AGD+ A+ +
Sbjct: 237 SLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVV 296
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
G + +T+ +I L + R EA I + + GL P ++Y L++G + G
Sbjct: 297 QGSGLSVKTATLVAVIWALGNCGRTVEAEAIFE-EMRDNGLKPRTRAYNALLRGYVKAGL 355
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+++A V +EM G P+ + YS ID Y G E A ++ KEM + V+
Sbjct: 356 LKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQ 407
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 133 RSPENDPKLKLFEVLVKT-YRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRG 191
R+ ++D +LFE +++ Y C + F+++I + E+ + +++ + S+G
Sbjct: 492 RAGKHDRAEELFEEMMEGGYSPCNT---TFNIMINS---FGDQERWDDVKNLLAHMRSQG 545
Query: 192 LSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFN 251
L T LI +IY + G +DA + D + ++P+ +N
Sbjct: 546 LVPNSVTYTTLI-------------DIYGKS-GRFNDAIECL--DDMKAAGLKPSSTMYN 589
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
AL+ + + G E+ + M G +P + + L+ F E+RR EA + + M++
Sbjct: 590 ALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKEN 649
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
+++ DVV Y T++ + + + + EM LSG
Sbjct: 650 DLKPDVVTYTTLMKALIRVEKFDKVPSVYEEMILSG 685
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 59/142 (41%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+ L+ + + G F + +M G +P Y+ L+ + + +A
Sbjct: 548 PNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSA 607
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ MR ++ ++A N++I F E A A + M + ++ VT+ L+ R
Sbjct: 608 FRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIR 667
Query: 365 AGDVDSAILVYNDMCRKGFEPE 386
D VY +M G P+
Sbjct: 668 VEKFDKVPSVYEEMILSGCTPD 689
>gi|218192883|gb|EEC75310.1| hypothetical protein OsI_11678 [Oryza sativa Indica Group]
Length = 473
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 121/243 (49%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P + L+ F F KV + M G PD Y ++ + EA
Sbjct: 216 VPPQLDAVADLVAAFSAAANFGKVSETLHLMIAAGSVPDTVIYQRIIHGLFAHKMGSEAL 275
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ E++ + D V Y T I G C++G + A + + EM G+E + + LV Y
Sbjct: 276 RVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGMEPNEYAYCSLVAYY 335
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+AGD + A VY++M KG + + +L+ C RV EAL + + +VK G+
Sbjct: 336 CKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMFE-EMVKKGIEHD 394
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI+GLC+ G++ EA++V +++ G EPS+ ++ ID +EG V+ A L K
Sbjct: 395 VITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEEGQVDAAVELLK 454
Query: 483 EMF 485
F
Sbjct: 455 PFF 457
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 15/300 (5%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
+R ALR+ D +LF + G A V L+ C E + ++ + D R
Sbjct: 155 AMRSALRAARPDLVFRLFSAFSSSPDFPGDAATVAFLVRACSAEGRPLDGLRLLRDGARR 214
Query: 187 LMSRGLSVKVSTCNALIWEVSRGK-----------GVISGYEIY-REVFGLDSDATAGIG 234
+ L A + GK G + IY R + GL +
Sbjct: 215 GVPPQLDAVADLVAAFSAAANFGKVSETLHLMIAAGSVPDTVIYQRIIHGLFAHKMGSEA 274
Query: 235 KDVKRVVRVRP-NVH--TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
V +++R NV T+ + G + G ++ +W EM G EP+ Y+Y L+A
Sbjct: 275 LRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGMEPNEYAYCSLVAY 334
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
+C+ A K+++EM K ++ V+ N ++ GFC G + A F EM G+E
Sbjct: 335 YCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHD 394
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+T+ L+ G C+AG + AI VY + G EP ST LI +C++ +V A+++LK
Sbjct: 395 VITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEEGQVDAAVELLK 454
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 83/219 (37%), Gaps = 36/219 (16%)
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
AR G P + + L+A F + + M D V Y II G
Sbjct: 212 ARRGVPPQLDAVADLVAAFSAAANFGKVSETLHLMIAAGSVPDTVIYQRIIHGLFAHKMG 271
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+ A F E+ L G +VT+ ++G C+ G +D A ++N+M KG E
Sbjct: 272 SEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGME--------- 322
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
P E +Y L+ C+ G E A KV EM+GKG
Sbjct: 323 ---------------------------PNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKG 355
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ S + + G+ G V+ A + +EM + + +
Sbjct: 356 LKESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHD 394
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 123/246 (50%), Gaps = 1/246 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNVHT+ ++ G+ REG + E + V M G +P+ +Y+ L+ C+ A +
Sbjct: 319 KPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFE 378
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +M+ + ++ YN +I GFC+ G++ A + R G++ +T+ L+ +C
Sbjct: 379 LMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHC 438
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G + A+ +++ M G P+ LI C +R++ E+ + + GL PT+
Sbjct: 439 KQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFD-KCLMIGLLPTK 497
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++Y +I G C+ G+ AL+V MV G Y A I G KE +E A L +
Sbjct: 498 QTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEG 557
Query: 484 MFENQV 489
M + ++
Sbjct: 558 MLDKRL 563
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 168/351 (47%), Gaps = 21/351 (5%)
Query: 129 RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLM 188
R+A R P+ ++L+ + GS P +++ ++ D+V +
Sbjct: 80 RLASR-PDLRRLMRLYVTAATAFVARGSLPMAHEVMRGMVAAFGEAGRLPEAADMVLEMR 138
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIY-REVFGLDSDATAGIGKDVKRVVRVRPNV 247
S GL + V T N W + G+ +G +Y R+VF D AG+ P+
Sbjct: 139 SHGLPLCVETAN---WVLR--VGLETGSFVYARKVF--DGMTRAGVC----------PDE 181
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
+F AL+V REG E+V+ + M R G D + +V++ CE+ R ++ + +
Sbjct: 182 RSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRR 241
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M + +VV Y I G C+ + +A EM G++ + T L++G C+ G
Sbjct: 242 MLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGW 301
Query: 368 VDSAILVYNDMCR-KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
+ A ++ + + ++P T V+IG C + ++ A ++L R+V+ GL P +Y
Sbjct: 302 TERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARA-EMLLVRMVEQGLKPNTNTY 360
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
LI G C+ G + A ++ +M +GF P++ Y+A IDG+ K+G ++ A
Sbjct: 361 TTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEA 411
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 147/317 (46%), Gaps = 28/317 (8%)
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
L++ CC E K +E+++ ++ + G S+ +TC ++ + E +R +
Sbjct: 187 LVVVCCREGK-VEEVDA---LLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRM 242
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+ PNV + A + G + ++ V EM G +P+
Sbjct: 243 LETGTP----------------PNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNV 286
Query: 283 YSYSVLMAVFCE----ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
Y+++ L+ C+ ER R KL ++ + + +V Y +IGG+C G++ARAE
Sbjct: 287 YTHTTLIDGLCKIGWTERAFRLFLKL---IKSSSYKPNVHTYTVMIGGYCREGKLARAEM 343
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
M G++ ++ T+ L+ G+C+ G D A + N M ++GF P T +I C
Sbjct: 344 LLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFC 403
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
K ++ EA +L+ + GL + +Y LI C++G + AL + MV G P +
Sbjct: 404 KKGKIQEAYKVLRMATSQ-GLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDI 462
Query: 459 EIYSAFIDGYMKEGNVE 475
E Y++ I Y ++ +E
Sbjct: 463 EAYTSLISTYCQQRQME 479
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 104/242 (42%), Gaps = 8/242 (3%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T N ++ G+F V+ M R G PD S+ L+ V C E ++ E + L
Sbjct: 146 VETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLA 205
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M D ++ CE G EFFR M +G + V + ++G C+
Sbjct: 206 AMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRR 265
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD---KRRVFEA-LDILKARVVKFGLFPT 422
V A V +M +G +P T LI LC R F L ++K+ K P
Sbjct: 266 YVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYK----PN 321
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I G C EGK+ A + MV +G +P+ Y+ I G+ K G+ + A L
Sbjct: 322 VHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMN 381
Query: 483 EM 484
+M
Sbjct: 382 KM 383
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 107/214 (50%), Gaps = 1/214 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN +T+ L+ G + G+F++ ++ +M + G P+ Y+Y+ ++ FC++ +++EA
Sbjct: 353 LKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAY 412
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+ + ++ D + Y +I C+ G + A + F M +G + L++ Y
Sbjct: 413 KVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTY 472
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ ++ + ++ G P T +I C R AL + + R+V+ G F
Sbjct: 473 CQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFE-RMVQNGCFAD 531
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+Y LI GLC+E ++EEA + M+ K P
Sbjct: 532 SITYGALISGLCKESRLEEAKALYEGMLDKRLVP 565
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 112/248 (45%), Gaps = 52/248 (20%)
Query: 245 PNVHTFNALMVGFYREGA-----------------FEKVE------------------DV 269
PN++T+NA++ GF ++G F+K+ D+
Sbjct: 390 PNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDL 449
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+ M GC PD +Y+ L++ +C++R+M E++K +++ + Y ++I G+C+
Sbjct: 450 FDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCK 509
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP---- 385
+G A F M +G + S+T+ L++G C+ ++ A +Y M K P
Sbjct: 510 VGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVT 569
Query: 386 -----------EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
E ++I V + + DKR+ +D++ ++ G + + +FL K L
Sbjct: 570 RVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALG--DVDAASLFLKKVLD 627
Query: 435 EEGKMEEA 442
E+ ++ A
Sbjct: 628 EDYAVDHA 635
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 128/337 (37%), Gaps = 41/337 (12%)
Query: 30 SSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIAL--GL--KNNP 85
+ TPP+ N A + L K ++ L + GL P ++ L GL
Sbjct: 245 TGTPPN--VVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWT 302
Query: 86 HLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFE 145
A R F S K ++ +Y +I R + A +++ V + P +
Sbjct: 303 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARA-EMLLVRMVEQGLKPNTNTYT 361
Query: 146 VLVKTYRECGSAPFVFDLLIKCCLE--VKNIE-------------KIETCVDIVRMLMSR 190
L+ + + GS F+L+ K E + NI KI+ ++RM S+
Sbjct: 362 TLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQ 421
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAGIGK------------- 235
GL T LI E + + +++ + G D A
Sbjct: 422 GLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEES 481
Query: 236 ----DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
D ++ + P T+ +++ G+ + G V+ M + GC D +Y L++
Sbjct: 482 QKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISG 541
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
C+E R+ EA+ L+E M DK + V T+ +C
Sbjct: 542 LCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYC 578
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 121/228 (53%), Gaps = 1/228 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ +V +++L+ F EG E +++ EM R P+ +YS LM R REA
Sbjct: 216 LKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREAS 275
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ ++M + V DVVAY + G C+ G A + M G E ++T+ +VNG
Sbjct: 276 EMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGL 335
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV-KFGLFP 421
C+ +D A V M +KG +P+ T L+ LC ++ EA+D+ K + KF + P
Sbjct: 336 CKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKP 395
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
+ LI+GLC+EG++ +A ++ + MV G + ++ Y+ I+GY+
Sbjct: 396 DVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYL 443
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 124/245 (50%), Gaps = 3/245 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPN+ T++ L+ + + G + + EM R G + D + YS L++ FC E + +
Sbjct: 182 RPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRE 241
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L++EM + V +VV Y+ ++ G G A E ++M GV V + L +G C
Sbjct: 242 LFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLC 301
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G AI V + M +KG EP T V++ LC + R+ +A +++ +VK G P
Sbjct: 302 KNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEM-MVKKGKKPDA 360
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA--FIDGYMKEGNVEMATMLR 481
+Y L+KGLC GK+ EA+ + ++ + F ++++ I G KEG V A +
Sbjct: 361 VTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIH 420
Query: 482 KEMFE 486
M E
Sbjct: 421 SSMVE 425
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 172/386 (44%), Gaps = 39/386 (10%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+Y T+++ +A+ + AR + + + P L + VL+ Y + G LL
Sbjct: 151 TYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLL-- 208
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
E++E GL V ++LI + +G E++ E+
Sbjct: 209 --------EEME----------REGLKADVFVYSSLISAFCGEGDIETGRELFDEM---- 246
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
++R +V PNV T++ LM G R G + + ++ +M G PD +Y+
Sbjct: 247 ----------LRR--KVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYT 294
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
VL C+ R +A K+ + M K E + YN ++ G C+ M A M
Sbjct: 295 VLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKK 354
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF--EPEGSTIEVLIGELCDKRRVF 404
G + +VT+ L+ G C AG + A+ ++ + + F +P+ T LI LC + RV
Sbjct: 355 GKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVH 414
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+A I + +V+ GL +Y FLI+G K+ EALK+ V GF P+ YS
Sbjct: 415 DAARI-HSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVM 473
Query: 465 IDGYMKEGNVEMATMLRKEMFENQVR 490
I+G K + +A L +M ++ +R
Sbjct: 474 INGLCKMQMLSVARGLFCKMKDSGIR 499
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 118/247 (47%), Gaps = 2/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEERRMREA 301
V P+ T+N L+ GF + + ++ M + G C P+ +YSVL+ +C+ + E
Sbjct: 145 VVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEG 204
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L EEM + ++ DV Y+++I FC G++ E F EM V + VT+ L+ G
Sbjct: 205 LGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQG 264
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
R G A + DM +G P+ VL LC R +A+ +L V K G P
Sbjct: 265 LGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQK-GEEP 323
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y ++ GLC+E +M++A V MV KG +P Y+ + G G + A L
Sbjct: 324 GTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLW 383
Query: 482 KEMFENQ 488
K + +
Sbjct: 384 KLLLSEK 390
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 114/247 (46%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+V T N L+ G +EG + M +G + + +Y+ L+ + R++ EA
Sbjct: 393 VKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEAL 452
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KLW+ + + + Y+ +I G C++ ++ A F +M SG+ + + + L+
Sbjct: 453 KLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSL 512
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR ++ A ++ +M + + ++I V A ++L + + L P
Sbjct: 513 CREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELL-SEMFMMDLVPD 571
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ LI + G ++EA+ + +MV G P + ++ + + GY +G E L
Sbjct: 572 AVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLH 631
Query: 483 EMFENQV 489
+M + V
Sbjct: 632 QMADKDV 638
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 19/279 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVK--VSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
KI +D+ ++L+S VK V TCN LI + + V I+ + +
Sbjct: 375 KIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMG------- 427
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
++ N+ T+N L+ G+ + +W G P+ +YSV++ C
Sbjct: 428 ---------LQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLC 478
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + + A L+ +M+D + V+ YN ++ C + +A F+EM V
Sbjct: 479 KMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVV 538
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
+F +++G +AGDV SA + ++M P+ T +LI + EA+ + + +
Sbjct: 539 SFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYE-K 597
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
+V G P + L+KG +G+ E+ + + +M K
Sbjct: 598 MVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADK 636
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 4/269 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
SDA + + + P+ + L+ + ++ V V+ +M P S S
Sbjct: 22 SDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLS 81
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM--G 344
L F A + M + +V N ++ GFC G+ +A F +M
Sbjct: 82 ALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRN 141
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG-FEPEGSTIEVLIGELCDKRRV 403
V VT+ LVNG+C+A + A +++ M + G P T VLI C V
Sbjct: 142 YDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEV 201
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
E L +L+ + + GL Y LI C EG +E ++ EM+ + P++ YS
Sbjct: 202 GEGLGLLE-EMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSC 260
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ G + G A+ + K+M VR +
Sbjct: 261 LMQGLGRTGRWREASEMLKDMTARGVRPD 289
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 77/168 (45%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RP V +NALM RE + E+ ++ EM + D S+++++ + ++ A+
Sbjct: 498 IRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAK 557
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM ++ D V ++ +I F ++G + A + +M G V F+ L+ GY
Sbjct: 558 ELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGY 617
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
G+ + I + + M K + ++ LC R + IL
Sbjct: 618 GLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKIL 665
>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Glycine max]
Length = 618
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 196/460 (42%), Gaps = 88/460 (19%)
Query: 90 RFFSFTQHKSLCKHSLSS------YATIIHILSRARLIGPARDVIRVA--LRSPENDPKL 141
RF + Q HSL + + TII L RAR+ R VI+V + P L
Sbjct: 84 RFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARM---TRTVIKVLDLVYKFHGSPSL 140
Query: 142 KLF----EVLVKT--------YRECGSAP------FVFDLLIK-CCLEVKNIEKIETCVD 182
K+F +VLVK YR+ A + F +L+K CL +I
Sbjct: 141 KIFNSILDVLVKEDIDMAREFYRKSMMASGVEGDDYTFGILMKGLCL----TNRIGEGFK 196
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+++++ SRG++ N L+ + R V + E+ +D
Sbjct: 197 LLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEM------------ED------ 238
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN TFN L+ G+ +EG + + + +G PD S + ++ + C R EA
Sbjct: 239 --PNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAA 296
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ E + DVVAYNT+I GFC G++ F ++M G + T+ L++G+
Sbjct: 297 EVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGF 356
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR--------- 413
+G +D A+ ++NDM G + T + LI LC + R+ + IL+
Sbjct: 357 SESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRG 416
Query: 414 ------------------------VVKFG-LFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
+ K G LFP +I C++G +E+A +V +
Sbjct: 417 HISPYNSIIYGLLKKNGFDESAEFLTKMGNLFPRAVDRSLMILEHCKKGAIEDAKRVYDQ 476
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
M+ +G PS+ +Y+ + G+ K+GNV A L EM N
Sbjct: 477 MIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANN 516
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 175/391 (44%), Gaps = 25/391 (6%)
Query: 108 YATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKC 167
Y T++H L R +G AR+ L + DP F +L+ Y + G++ LL K
Sbjct: 213 YNTLLHALCRNGKVGRARN-----LMNEMEDPNDVTFNILISGYCKEGNSVQALVLLEKS 267
Query: 168 CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDS 227
+ + + + ++ +L + G +++ + ++ V G++ + G
Sbjct: 268 -FSMGFVPDVVSVTKVLEILCNAGRTMEAA---EVLERVESMGGLLDVVAYNTLIKGFCG 323
Query: 228 DATAGIGKDVKRVVRVR---PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+G + + + PNV T+N L+ GF G + D++ +M G + + +
Sbjct: 324 AGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVT 383
Query: 285 YSVLMAVFCEERRMREA---EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
+ L+ C E R+ + +L EE ++ + H + YN+II G + + EF
Sbjct: 384 FDTLIRGLCSEERIEDGFSILELMEESKEGSRGH-ISPYNSIIYGLLKKNGFDESAEFLT 442
Query: 342 EMG---LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
+MG V+ S + EH C+ G ++ A VY+ M +G P L+
Sbjct: 443 KMGNLFPRAVDRSLMILEH-----CKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFS 497
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ V EA++++ + FP ++ +I G C +GK+E ALK+ ++ +G P+
Sbjct: 498 KQGNVREAVELMNEMIAN-NCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNT 556
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
E YS ID + G+++ A + +M + +
Sbjct: 557 ETYSPLIDVLCRNGDLQKAMQVFMQMVDKGI 587
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 101/222 (45%), Gaps = 38/222 (17%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
R ++ +N+++ G ++ F++ + +M L P S+++ C++ + +A++
Sbjct: 415 RGHISPYNSIIYGLLKKNGFDESAEFLTKMGNLF--PRAVDRSLMILEHCKKGAIEDAKR 472
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++++M D+ ++ YN ++ GF + G + A E EM + TF ++ G+C
Sbjct: 473 VYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFC 532
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G V+SA+ + D+ +G P T LI D+L
Sbjct: 533 RQGKVESALKLVEDITARGCVPNTETYSPLI-------------DVL------------- 566
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
C G +++A++V +MV KG P L I+++ +
Sbjct: 567 ----------CRNGDLQKAMQVFMQMVDKGILPDLFIWNSLL 598
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 188/436 (43%), Gaps = 43/436 (9%)
Query: 33 PPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFF 92
PP+D + + S T H+ LLS + TP + + L N+ AL+FF
Sbjct: 15 PPADSAAIAKLILSSPNTTHQDDQ---FLLSTKTTPWTPNLVNSVLKRLWNHGPKALQFF 71
Query: 93 SF-TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY 151
F H H SS+ I I +R L +I +RS P K F ++ + Y
Sbjct: 72 HFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIH-RMRSLRIGPSPKTFAIVAERY 130
Query: 152 RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
G K + V + + G +++ N ++ + + K
Sbjct: 131 ASAG--------------------KPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 170
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
V YE++R + G R + T+N ++ G+ K +V
Sbjct: 171 VEKAYELFRALRG-----------------RFSVDTVTYNVILNGWCLIKRTPKTLEVLK 213
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM G P+ +Y+ ++ F ++R A + + EM+ ++ E DVV Y T++ GF G
Sbjct: 214 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 273
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
E+ RA F EM GV S T+ ++ C+ +V++A++++ +M R+G+EP +T
Sbjct: 274 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 333
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
VLI L F + L R+ G P ++Y +I+ E ++E+AL + +M
Sbjct: 334 VLIRGLFHAGE-FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 392
Query: 452 KGFEPSLEIYSAFIDG 467
P+L+ Y+ I G
Sbjct: 393 GDCLPNLDTYNILISG 408
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 116/242 (47%), Gaps = 4/242 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P V+TF +M F + + +M + GC P+ Y +L+ E R+ EA
Sbjct: 196 ISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAM 255
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL EEM E DV +N +I G C+ G + A + M L + ++ +L++G
Sbjct: 256 KLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGL 315
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G VD A M K P LI R EA D+L +V G P
Sbjct: 316 CRMGKVDEA----RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ +I GLC++G + AL+ EMV KGFEP++ Y+ IDG+ K+G+ E A+ +
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVN 431
Query: 483 EM 484
M
Sbjct: 432 SM 433
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 123/238 (51%), Gaps = 5/238 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+ L+ GF ++G FE+ V M+ G + Y+ L+ C++ ++++A ++
Sbjct: 405 PNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQM 464
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM K + D+ +N++I G C+ +M A +R+M L GV +++VT+ L++ + R
Sbjct: 465 YGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLR 524
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG--LFPT 422
+ A + +M +G + T LI LC + L +++ FG +FP+
Sbjct: 525 LELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQM---FGEEIFPS 581
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
S LI C GK+ +AL+ +M+ +G P + Y++ I+G K G + A L
Sbjct: 582 INSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL 639
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 136/293 (46%), Gaps = 25/293 (8%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+V + ++GLS+ N LI + + + ++Y E+ ++ G
Sbjct: 429 VVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM------SSKG---------- 472
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+P+++TFN+L+ G + E+ ++ +M G + +Y+ L+ F +++A+
Sbjct: 473 CKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQAD 532
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA----EEFFREMGLSGVESSSVTFEHL 358
KL EMR + D + YN +I C+ G + E+ F E + S ++ L
Sbjct: 533 KLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI----L 588
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+N +CR G V+ A+ DM ++G P+ T LI LC R EAL++ K G
Sbjct: 589 INSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAK-G 647
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ P +Y LI C EG +A ++ + V GF P+ +S I+ ++K
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKN 700
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 2/247 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDV-WVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN +N L+ G+ G FE+ +D+ + M G EPD +++++++ C++ + A
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +EM K E +V+ Y +I GFC+ G A + M G+ ++V + L+
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G + A+ +Y +M KG +P+ T LI LC ++ EAL + + +++ G+
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLE-GVIAN 511
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI +++A K+ EM +G Y+ I K G E L +
Sbjct: 512 TVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIE 571
Query: 483 EMFENQV 489
+MF ++
Sbjct: 572 QMFGEEI 578
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
+ P+ TFN ++ G ++G + EM + G EP+ +Y++L+ FC++
Sbjct: 365 IAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFE 424
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
EA K+ M K + + V YN +IG C+ G++ A + + EM G + TF L+
Sbjct: 425 EASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLI 484
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
G C+ ++ A+ +Y DM +G T LI + + + D L + G
Sbjct: 485 YGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFL-RLELIQQADKLVGEMRFRGC 543
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
+Y LIK LC+ G E+ L + +M G+ PS+ + I+ + + G V A
Sbjct: 544 PLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQ 603
Query: 480 LRKEMFE 486
++M +
Sbjct: 604 FLRDMIQ 610
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 17/270 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
KI+ + + + S+G + T N+LI+ + + + +YR++
Sbjct: 457 KIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML------------ 504
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ V N T+N L+ F R ++ + + EM GC D +Y+ L+ C+
Sbjct: 505 ----LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKT 560
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ L E+M + + + + N +I FC G++ A +F R+M G+ VT+
Sbjct: 561 GATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTY 620
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+NG C+ G A+ ++N + KG P+ T LI C + +A +L + V
Sbjct: 621 NSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLL-FKGV 679
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
G P E ++ LI + E +
Sbjct: 680 SNGFIPNEITWSILINYFVKNNSDSEQFTI 709
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 68/176 (38%), Gaps = 10/176 (5%)
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
H Y +I +GE ++ ++M G F ++ Y +AG A +
Sbjct: 92 HSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRL 151
Query: 375 YNDM----C-RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
DM C F+ +E+L+ C K D+L G+ PT ++ +
Sbjct: 152 LLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSR-----GISPTVYTFGVV 206
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+K C +++ A + +M G P+ IY I + V A L +EMF
Sbjct: 207 MKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMF 262
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 197/464 (42%), Gaps = 42/464 (9%)
Query: 28 TSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHL 87
T P SD S +A V + + + R L ++P +++ L N L
Sbjct: 86 TDGDGPGSDVSE--VAERVCRVVSSQPEPRIASALDALGVNMSPELVAEVLRNLSNAGIL 143
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
AL FF + + + +++ S+ +I L + + + +L L
Sbjct: 144 ALAFFRWAERQQGFRYTAESFHNLIEALGKIK--------------------QFRLVWSL 183
Query: 148 VKTYRECGS-APFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
V+ R G + F L+++ K++ V+ + S GL +S N LI +
Sbjct: 184 VEAMRCRGLLSKDTFRLIVR---RYARARKVKEAVETFEKMSSFGLKADLSDYNWLIDVL 240
Query: 207 SRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
S+ K V + I++E+ KR R P++ T+ LM G+ E +
Sbjct: 241 SKSKQVKKAHAIFKEM---------------KRNGRFVPDLKTYTVLMEGWGHEKDLLML 285
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ V+ EM G +PD +Y L++ FC+ + EA K++ EM Y +I G
Sbjct: 286 KSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLING 345
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
+ A ++F SG T +V YCR+ A + ++M + G P
Sbjct: 346 LGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPN 405
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T ++++ L +++ EA ++ + R+ G P +Y ++ C +++ ALKV
Sbjct: 406 ARTYDIILQYLIKSQKIEEAYNVFQ-RMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVW 464
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+M KG P + ++S+ I+G E +E A + +EM + +R
Sbjct: 465 KQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIR 508
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 24/229 (10%)
Query: 148 VKTYRE-----CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
+K +RE C +P V+ +LI + + E+++ + + + G ++V TCNA+
Sbjct: 321 IKVFREMEANGCMPSPHVYCMLIN---GLGSEERLDEALKYFELSKASGFPMEVPTCNAV 377
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
+ R +++ +D GIG PN T++ ++ +
Sbjct: 378 VGAYCRSSKFQHAFKM------VDEMRKTGIG----------PNARTYDIILQYLIKSQK 421
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
E+ +V+ M GCEP +Y++++ +FC R+ A K+W++M++K V + +++
Sbjct: 422 IEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSS 481
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
+I G C + A +F+EM G+ F +L G + A
Sbjct: 482 LINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALIEGGRISLA 530
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T NA++ + R F+ + EM + G P+ +Y +++ + +++ EA +++
Sbjct: 371 VPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQ 430
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M + E + Y ++G FC + A + +++M GV F L+NG C
Sbjct: 431 RMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSLINGLCFEN 490
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
++ A + + +M KG P G L L + R+ A D+
Sbjct: 491 RLEEACVYFQEMLDKGIRPPGQLFSNLKEALIEGGRISLAQDM 533
>gi|357512639|ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 451
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 181/398 (45%), Gaps = 37/398 (9%)
Query: 70 TPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR 129
+PT+ ++ + +++P LA F + + +H+ S+Y +I R++ D++R
Sbjct: 41 SPTRVQKL-IASQSDPLLAKEIFDYASLQPNFRHNYSTYLILILKFGRSKHFSLLDDLLR 99
Query: 130 VALRSPENDPKLKLFEVLVKTYRECG---SAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
LF L+K Y E A F ++++ +K + K
Sbjct: 100 RLKSESSQPITPTLFSYLIKIYGEANLPDKALNTFYIMLQ--FNIKPLTK---------- 147
Query: 187 LMSRGLSVKVSTCNAL-----IWEVSRGKGVI---SGYEIYREVFGLDSD---ATAGIGK 235
++R L + VS N L +++ + GV Y I F L+ D A K
Sbjct: 148 HLNRILDILVSHRNYLRPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNK 207
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
KR V P++ ++ LM R+ D++ +M G PD ++Y+ L+ C +
Sbjct: 208 MFKR--DVVPDIQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRK 265
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+++REA KL M+ K D+V YNT+I GFC G A + +M +G + V++
Sbjct: 266 KKLREAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSY 325
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
LVNG C G +D A +M KGF P + I L+ C+ R+ EA +L + +
Sbjct: 326 RTLVNGLCHLGMLDEATKYVEEMLSKGFSPHFAVIHALVKGFCNVGRIEEACGVL-TKSL 384
Query: 416 KFGLFPTEKSYMFLIKGLCE-------EGKMEEALKVQ 446
+ P + ++M ++ +CE +G +EE LK++
Sbjct: 385 EHREAPHKDTWMIIVPQICEVDDGVKIDGVLEEVLKIE 422
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 7/213 (3%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
D++ + + G PD SY++LM FC + A L+ +M ++V D+ +Y ++
Sbjct: 168 DLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQAL 227
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR---KGFE 384
C ++ A + F +M G S T+ L+N CR + A Y +CR KG
Sbjct: 228 CRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREA---YKLLCRMKVKGCN 284
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P+ +I C + R +A ++ G P SY L+ GLC G ++EA K
Sbjct: 285 PDIVHYNTVILGFCREGRAHDACKVIDDMQAN-GCLPNLVSYRTLVNGLCHLGMLDEATK 343
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
EM+ KGF P + A + G+ G +E A
Sbjct: 344 YVEEMLSKGFSPHFAVIHALVKGFCNVGRIEEA 376
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 2/137 (1%)
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE-ALDI 409
+ F +L+ Y A D A+ + M + +P + ++ L R A D+
Sbjct: 110 TPTLFSYLIKIYGEANLPDKALNTFYIMLQFNIKPLTKHLNRILDILVSHRNYLRPAFDL 169
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
K K G+FP KSY L++ C G + A + +M + P ++ Y +
Sbjct: 170 FKD-AHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALC 228
Query: 470 KEGNVEMATMLRKEMFE 486
++ V A L ++M
Sbjct: 229 RKSQVNGAVDLFEDMLN 245
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 125/245 (51%), Gaps = 1/245 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV T+ ++ F + + M +GC P+ +++ L+ F E+ ++ +A
Sbjct: 200 LQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDAL 259
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+W M D+ ++YN +I G C IG++ A +FF M + + ++ T+ LV+G+
Sbjct: 260 SMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGF 319
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
AGD+D A+L++N+M G +P +I LC K+ +F+ + L +++ P
Sbjct: 320 SNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLC-KKMMFDQAESLIDKMLMDNCPPN 378
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ LI LC+ G++ AL V M G P+ Y+ + G +EGN + A +
Sbjct: 379 TVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVI 438
Query: 483 EMFEN 487
EM N
Sbjct: 439 EMLNN 443
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 120/245 (48%), Gaps = 6/245 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P V +N L+ RE V V+ M + G +P+ Y+Y++L+ C+ R+ A K+
Sbjct: 67 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EM K D V++ TI+ G C++G + A F E V++S H + G R
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET--VPVQASYNAVVHALCGEFR 184
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+V S V N+M ++G +P T ++ C R + A IL AR+V G P
Sbjct: 185 MWEVFS---VVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAIL-ARMVSMGCTPNVL 240
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ L+KG E+GK+ +AL + MV +G+ PS Y+ I G G+++ A M
Sbjct: 241 TFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM 300
Query: 485 FENQV 489
N +
Sbjct: 301 KRNAL 305
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 2/243 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T++ L+ GF G + +W EM GC+P+ Y+ ++ V C++ +AE L
Sbjct: 307 PNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESL 366
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M N + V +NT+IG C+ G + RA F M +G + T+ L++G R
Sbjct: 367 IDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFR 426
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+ A + +M GFE T +I LC A+ +L R++ G+ P
Sbjct: 427 EGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAM-LLLGRMMVQGIQPDAF 485
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM-LRKE 483
++ +I C+EGK+ A + +M ++ Y+ I +G + A + L K
Sbjct: 486 TFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKM 545
Query: 484 MFE 486
++E
Sbjct: 546 LYE 548
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 32/283 (11%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D R V PNV+T+N L+ + + + EM+R GC PD S+ +++ C+
Sbjct: 93 DNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKL 152
Query: 296 RRMREAE------------------------KLWE------EMRDKNVEHDVVAYNTIIG 325
R+ EA ++WE EM + ++ +VV Y TI+
Sbjct: 153 GRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVD 212
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
FC+ E+ A M G + +TF LV G+ G V A+ +++ M +G+ P
Sbjct: 213 AFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAP 272
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+ VLI LC + ALD + + + L P +Y L+ G G ++ A+ +
Sbjct: 273 STISYNVLIRGLCCIGDLKGALDFFNS-MKRNALLPNATTYSTLVDGFSNAGDLDGAMLI 331
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA-TMLRKEMFEN 487
EM G +P++ +Y+ ID K+ + A +++ K + +N
Sbjct: 332 WNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 374
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N L+ G +REG + + +EM G E +Y+ ++ C+ + A L
Sbjct: 412 PNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLL 471
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M + ++ D +N II +C+ G+++ A +M + V + L++ C
Sbjct: 472 LGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCN 531
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
G + +A++ M +G P +T VL+
Sbjct: 532 QGKLSNAMVYLLKMLYEGICPNEATWNVLV 561
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 84/226 (37%), Gaps = 67/226 (29%)
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA------------- 371
GG G++ + +EM L GV + + + RAG D A
Sbjct: 6 GGLPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCR 65
Query: 372 -----------------------ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+ VY++M + G +P T +LI LC RV A
Sbjct: 66 DPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARK 125
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA-------LKVQA-------------- 447
+L + + G P E S+ ++ G+C+ G++EEA + VQA
Sbjct: 126 MLD-EMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFR 184
Query: 448 ---------EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
EMV +G +P++ Y+ +D + K + MA + M
Sbjct: 185 MWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARM 230
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 130/242 (53%), Gaps = 2/242 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARL-GCEPDCYSYSVLMAVFCEERRMREAE 302
+PNV+T +L+ G ++G E+ +++++ R +P+ ++Y+ +++ +C+E ++ AE
Sbjct: 346 KPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAE 405
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+E M+++ + + Y T+I G C+ G ++A E M G ++ T+ +V+G
Sbjct: 406 MLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGL 465
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G + A + N + E +G T +LI E C + + +AL L ++ K G P
Sbjct: 466 CKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLN-KMFKVGFQPD 524
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y LI C + M+++ K+ E++ G P+ E Y++ I GY +E V +A +
Sbjct: 525 IHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQ 584
Query: 483 EM 484
+M
Sbjct: 585 KM 586
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNVHT+ A++ G+ +E + E ++ M G P+ +Y+ L+ C+ +A +
Sbjct: 382 KPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYE 441
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL---SGVESSSVTFEHLVN 360
L E M ++ + YN+I+ G C+ G RAEE F+ + + +E+ VT+ L++
Sbjct: 442 LMELMSNEGFFPNTCTYNSIVDGLCKRG---RAEEAFKLLNTGFQNQIEADGVTYTILIS 498
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
C+ D++ A++ N M + GF+P+ LI C ++ + + + L V+K GL
Sbjct: 499 EQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFC-RQNMMKDSEKLFDEVIKLGLA 557
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
PT+++Y +I G C E K+ A+K +M G P Y A I G KE ++ A L
Sbjct: 558 PTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQL 617
Query: 481 RKEMFE 486
M +
Sbjct: 618 YDTMID 623
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 154/323 (47%), Gaps = 21/323 (6%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
I K++ VD++ + ++GL + N +I + + V E VF D +
Sbjct: 187 IGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLV----EYAGNVF----DEMSAR 238
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV-EMARLGCEPDCYSYSVLMAVF 292
G V P+ T+ ++VG+ R G + D W+ EM G D + ++++ F
Sbjct: 239 G--------VYPDSCTYKYIIVGYCRNGNVLEA-DRWICEMMERGFVVDNATLTLIITAF 289
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
CE+ + A + ++ + +++ Y+++I G C+ G + +A E EM +G + +
Sbjct: 290 CEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNV 349
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRK-GFEPEGSTIEVLIGELCDKRRVFEALDILK 411
T L++G C+ G + A ++ + R ++P T +I C + ++ A ++L
Sbjct: 350 YTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRA-EMLF 408
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
R+ + GL P +Y LI G C+ G +A ++ M +GF P+ Y++ +DG K
Sbjct: 409 ERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKR 468
Query: 472 GNVEMATMLRKEMFENQVRQEDG 494
G E A L F+NQ+ + DG
Sbjct: 469 GRAEEAFKLLNTGFQNQI-EADG 490
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 89/171 (52%), Gaps = 4/171 (2%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
+M ++G +PD + Y+ L+A FC + M+++EKL++E+ + Y ++I G+C
Sbjct: 515 KMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREK 574
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+++ A +FF++M G S+++ L++G C+ +D A +Y+ M KG P T
Sbjct: 575 KVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRV 634
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
L E C A+ IL+ K + ++ LI+ LC E K+ A
Sbjct: 635 TLTYEYCKTEDFASAMVILERLNKKLWI----RTVHTLIRKLCCEKKVALA 681
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 38/198 (19%)
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEF----------------------------------- 339
H+VV ++G F EIG++ A +
Sbjct: 174 HEVV--ECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNV 231
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F EM GV S T+++++ GYCR G+V A +M +GF + +T+ ++I C+
Sbjct: 232 FDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCE 291
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
K V A+ +V K GL P +Y +I GLC+ G +++A ++ EMV G++P++
Sbjct: 292 KSLVNRAVWFFH-KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVY 350
Query: 460 IYSAFIDGYMKEGNVEMA 477
+++ I G K+G E A
Sbjct: 351 THTSLIHGLCKKGWTERA 368
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 1/201 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N+++ G + G E+ + + E D +Y++L++ C+ M +A
Sbjct: 453 PNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVF 512
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M + D+ Y T+I FC M +E+ F E+ G+ + T+ ++ GYCR
Sbjct: 513 LNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCR 572
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
V A+ + M G P+ + LI LC + R+ EA + + K GL P E
Sbjct: 573 EKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDK-GLSPCEV 631
Query: 425 SYMFLIKGLCEEGKMEEALKV 445
+ + L C+ A+ +
Sbjct: 632 TRVTLTYEYCKTEDFASAMVI 652
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 83/163 (50%), Gaps = 3/163 (1%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V +P++H + L+ F R+ + E ++ E+ +LG P +Y+ ++ +C E+++
Sbjct: 519 VGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSL 578
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A K +++M D D ++Y +I G C+ + A + + M G+ VT L
Sbjct: 579 AVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTY 638
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
YC+ D SA+++ + +K + T+ LI +LC +++V
Sbjct: 639 EYCKTEDFASAMVILERLNKKLWI---RTVHTLIRKLCCEKKV 678
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 188/422 (44%), Gaps = 42/422 (9%)
Query: 81 LKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPK 140
+N +A RFF + + + HS+ ++ T+I L++ R DV++V +
Sbjct: 32 FENAGMVAYRFFEWAEKQRHYNHSVKAFHTVIDSLAKIRQYQLMWDVVKVM--KSKRMVN 89
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
++ F ++++ Y +K+E V ++ + ++ N
Sbjct: 90 VETFCIIMRKYARA--------------------QKVEEAVYTFNIMDKYDVPPNLAAFN 129
Query: 201 ALIWEVSRGKGVISGYEIY---REVFGLDSDATA----GIGKD-----VKRVVR------ 242
L+ + + K V EI+ ++ F DS + G GKD + + R
Sbjct: 130 GLLSALCKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNG 189
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
RP++ T+ ++ + G ++ + EM C+P + YSVL+ + E R+ +A
Sbjct: 190 CRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAV 249
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EM + +E DV YN +IG FC+ + EM GV +S TF +++
Sbjct: 250 STFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSL 309
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G+ D A V+ M K EP+ T ++I C++ + +AL + K +K P+
Sbjct: 310 IGRGETDEAYRVFLRMI-KVCEPDADTYTMMIKMFCERDELKKALKVWKYMKLK-RFMPS 367
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ LI GLCE+G + +A + EM+ KG PS + +KEG ++ L+K
Sbjct: 368 MHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGREDVLKFLQK 427
Query: 483 EM 484
++
Sbjct: 428 KI 429
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 45/223 (20%)
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGE---MARAEEFFREMGLSGVESSSVTFEHLVNG 361
W E + ++ H V A++T+I +I + M + + + VE TF ++
Sbjct: 45 WAE-KQRHYNHSVKAFHTVIDSLAKIRQYQLMWDVVKVMKSKRMVNVE----TFCIIMRK 99
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
Y RA V+ A+ +N M + P + L+ LC + V +A +I + +K P
Sbjct: 100 YARAQKVEEAVYTFNIMDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDS--IKDRFVP 157
Query: 422 TEKSYMFLIKG-----------------------------------LCEEGKMEEALKVQ 446
K+Y L++G LC+ G+++EAL +
Sbjct: 158 DSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIV 217
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EM +P+ IYS + Y E +E A EM N +
Sbjct: 218 NEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEMENNGI 260
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 158/333 (47%), Gaps = 22/333 (6%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
D L++FE L+K C + +LI+ + I+ + ++ ++S+GL
Sbjct: 190 DLALEIFEELLKD--NCEPTVITYTILIEATILDGGID---VAMKLLDEMLSKGLEPDTL 244
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T NA+I + + V +E+ R + ++ G +P++ T+N L+
Sbjct: 245 TYNAIIRGMCKEMMVDKAFELLRSL------SSRG----------CKPDIITYNILLRTL 288
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
G + + E + EM +GC+P+ ++S+L+ C + ++ EA L M++K ++ D
Sbjct: 289 LSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDA 348
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
Y+ +I GFC G + A EF M G V + ++ G CR G D A+ V+
Sbjct: 349 YCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEK 408
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
+ G P S+ L L + AL+++ +++ G+ P E +Y LI LC +G
Sbjct: 409 LDEVGCPPNVSSYNTLFSALWSSGDRYRALEMI-LKLLNQGIDPDEITYNSLISCLCRDG 467
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
++EA+++ +M + P++ Y+ + G K
Sbjct: 468 MVDEAIELLVDMQSGRYRPNVVSYNIILLGLCK 500
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 120/244 (49%), Gaps = 1/244 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+V +NAL+ GF + E V M G PD +Y++++ FC ++ A +
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALE 194
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++EE+ N E V+ Y +I G + A + EM G+E ++T+ ++ G C
Sbjct: 195 IFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMC 254
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ VD A + + +G +P+ T +L+ L + + E + L + ++ G P
Sbjct: 255 KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEG-EKLISEMISIGCKPNV 313
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++ LI LC +GK+EEA+ + M KG +P Y I G+ +EG +++AT +
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373
Query: 484 MFEN 487
M +
Sbjct: 374 MISD 377
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 126/248 (50%), Gaps = 2/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V L+ GF+ K V + R G +PD ++Y+ L++ F + ++ A ++
Sbjct: 102 PDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNALISGFIKANQLENANRV 160
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M+ + DVV YN +IG FC G++ A E F E+ E + +T+ L+
Sbjct: 161 LDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATIL 220
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +D A+ + ++M KG EP+ T +I +C + V +A ++L++ + G P
Sbjct: 221 DGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSR-GCKPDII 279
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L++ L GK E K+ +EM+ G +P++ +S I ++G VE A L + M
Sbjct: 280 TYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSM 339
Query: 485 FENQVRQE 492
E ++ +
Sbjct: 340 KEKGLKPD 347
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 5/242 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N ++ F G + +++ E+ + CEP +Y++L+ + + A KL
Sbjct: 171 PDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKL 230
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EM K +E D + YN II G C+ + +A E R + G + +T+ L+
Sbjct: 231 LDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLS 290
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + ++M G +P T +LIG LC +V EA+++L++ K GL P
Sbjct: 291 RGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEK-GLKPDAY 349
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI G C EG+++ A + M+ G P + Y+ + G + G + A E+
Sbjct: 350 CYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQAL----EV 405
Query: 485 FE 486
FE
Sbjct: 406 FE 407
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 107/209 (51%), Gaps = 1/209 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ + ++ L+ GF REG + + M GC PD +Y+ +MA C + +A
Sbjct: 344 LKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQAL 403
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++E++ + +V +YNT+ G+ RA E ++ G++ +T+ L++
Sbjct: 404 EVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCL 463
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G VD AI + DM + P + +++ LC R +A+++L A K G P
Sbjct: 464 CRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEK-GCQPN 522
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
E +Y+ LI+G+ G EA+++ + G
Sbjct: 523 ETTYILLIEGIGFSGLRAEAMELANSLHG 551
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC---EIGEMARAEEFFREMGLSGVE 349
C + E+ E M DK DV+ +I GF IG+ R E G V
Sbjct: 80 CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDV- 138
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
+ L++G+ +A +++A V + M +GF P+ T ++IG C + ++ AL+I
Sbjct: 139 ---FAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEI 195
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
+ ++K PT +Y LI+ +G ++ A+K+ EM+ KG EP Y+A I G
Sbjct: 196 FE-ELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMC 254
Query: 470 KEGNVEMATMLRKEM 484
KE V+ A L + +
Sbjct: 255 KEMMVDKAFELLRSL 269
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
V L+N CRAG + ++ M KG+ P+ LI + R + +A +++
Sbjct: 70 VHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEI 129
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ ++G P +Y LI G + ++E A +V M +GF P + Y+ I + G
Sbjct: 130 -LERYGK-PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRG 187
Query: 473 NVEMATMLRKEMFENQ 488
+++A + +E+ ++
Sbjct: 188 KLDLALEIFEELLKDN 203
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 188/436 (43%), Gaps = 43/436 (9%)
Query: 33 PPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFF 92
PP+D + + S T H+ LLS + TP + + L N+ AL+FF
Sbjct: 21 PPADSAAIAKLILSSPNTTHQDDQ---FLLSTKTTPWTPNLVNSVLKRLWNHGPKALQFF 77
Query: 93 SF-TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY 151
F H H SS+ I I +R L +I +RS P K F ++ + Y
Sbjct: 78 HFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIH-RMRSLRIGPSPKTFAIVAERY 136
Query: 152 RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
G K + V + + G +++ N ++ + + K
Sbjct: 137 ASAG--------------------KPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
V YE++R + G R + T+N ++ G+ K +V
Sbjct: 177 VEKAYELFRALRG-----------------RFSVDTVTYNVILNGWCLIKRTPKALEVLK 219
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM G P+ +Y+ ++ F ++R A + + EM+ ++ E DVV Y T++ GF G
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 279
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
E+ RA F EM GV S T+ ++ C+ +V++A++++ +M R+G+EP +T
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
VLI L F + L R+ G P ++Y +I+ E ++E+AL + +M
Sbjct: 340 VLIRGLFHAGE-FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
Query: 452 KGFEPSLEIYSAFIDG 467
P+L+ Y+ I G
Sbjct: 399 GDCLPNLDTYNILISG 414
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 123/241 (51%), Gaps = 7/241 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+ +V T+N LM G + G ++ E + M GC PD +YS + C+ ++ A
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAH 242
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS-GVESSSVTFEHLVNG 361
++ E+MRD + + +VV YNTI+ G C+ G++ A E +M S G + V + +V+G
Sbjct: 243 QVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDG 302
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G A V M R G P+ T L+ LC ++ EA++ ++ ++ G P
Sbjct: 303 LCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME-GCKP 361
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE-----PSLEIYSAFIDGYMKEGNVEM 476
+Y L+ GLC G++ EA ++ EM G PS+ Y+A I G K G ++
Sbjct: 362 NAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDD 421
Query: 477 A 477
A
Sbjct: 422 A 422
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 128/245 (52%), Gaps = 10/245 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + TFN L+ G RE E + + MA G + D +Y+ LM C+ R++EAE+L
Sbjct: 150 PTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQL 209
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M+ DVVAY++ + G C+ G++ A + +M S + + VT+ +++G C+
Sbjct: 210 LERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCK 269
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVL-----IGELCDKRRVFEALDILKARVVKFGL 419
+G +D+A+ + M +G + V+ + LC R EA +++A + + G
Sbjct: 270 SGKIDTALEMMEQM----ASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA-MARAGC 324
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y L+ GLC+ GK+EEA++ EM +G +P+ Y + + G G + A
Sbjct: 325 RPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAER 384
Query: 480 LRKEM 484
+ +EM
Sbjct: 385 MVEEM 389
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RP+ + +M + + ++ EM R GC P +++ L++ C E+ + A+
Sbjct: 113 LRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMAD 172
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L + M V+ DVV YNT++ G C+ G + AE+ M SG V + V G
Sbjct: 173 SLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGL 232
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++G V +A V M +P T ++ LC ++ AL++++ G
Sbjct: 233 CKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLN 292
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y ++ GLC+ G+ +EA V M G P + YS+ ++G K G +E A +
Sbjct: 293 VVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVR 352
Query: 483 EM 484
EM
Sbjct: 353 EM 354
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 124/245 (50%), Gaps = 3/245 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TFNAL+ GF ++G E + MA G +P+ SY+ L+ C+ R EAE+L
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 305 WEEM--RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+M R D+V Y+T++ G+C+ G++ + E +E+ G+ ++ + ++
Sbjct: 68 VRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASL 127
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++ + A+ + +M R G P T LI C + + E D L + G+
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCC-REKNLEMADSLLQTMAASGVKAD 186
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ GLC+ G+++EA ++ M G P + YS+F+ G K G V A + +
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLE 246
Query: 483 EMFEN 487
+M ++
Sbjct: 247 QMRDS 251
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 111/214 (51%), Gaps = 3/214 (1%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M R GC P+ +++ L+ F ++ R + E+L E M + ++ +VV+YN ++ G C++
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 333 MARAEEFFREMGLSGVESSS--VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
AEE R+M G S+ VT+ L++GYC+AG V+ + + ++ +G P+
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
++ LC R+ EAL L +++ G PT ++ LI G C E +E A + M
Sbjct: 121 TKVMASLCKSARLGEAL-ELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMA 179
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G + + Y+ +DG K G ++ A L + M
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 152/313 (48%), Gaps = 20/313 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K++ + + + ++ + + V T ALI + + + V Y+++ E
Sbjct: 220 KVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEA------------- 266
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAVFCE 294
R P V T+N ++ G + G E ++ +M R +PD ++YS L+
Sbjct: 267 ---RAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNL 323
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV-ESSSV 353
R +A +L+EEM D DVV YNT++ G C+ G +A E FR+MG+ V + + +
Sbjct: 324 SNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVI 383
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ L++ +C+ + A+ + +M + P+ T +I +LC + R+ EA ++ ++
Sbjct: 384 TYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFES- 442
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+ P + ++ G C+ ++++A K+ M+ G P+L Y+A + G+ + G
Sbjct: 443 -IGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGR 501
Query: 474 VEMATMLRKEMFE 486
A ++ EM E
Sbjct: 502 YSDALIMYHEMIE 514
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 116/211 (54%), Gaps = 6/211 (2%)
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
EPD SY+ LM F + +++A L+ EM+D + + ++N ++ G C G+++ A E
Sbjct: 134 EPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWE 192
Query: 339 FFREMGLSGVESSS-VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
F++M SG+ S + +++ +++G C++ VD AI ++ M K P+ T LI L
Sbjct: 193 VFKDM--SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGL 250
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG-FEP 456
+RRV EA D+ + K G PT +Y +I GLC+ G++E AL + +MV + +P
Sbjct: 251 GKQRRVKEAYDLFEEARAK-GCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKP 309
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ YSA I+G E A L +EM +
Sbjct: 310 DMFTYSALINGLNLSNRGEKAYELYEEMLDT 340
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 131/275 (47%), Gaps = 36/275 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC-------------------------- 278
P+ ++N LM GF++ G +K ++ EM G
Sbjct: 135 PDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVF 194
Query: 279 -------EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
P+ SY++++ C+ R++ +A L+++M DK + DVV Y +I G +
Sbjct: 195 KDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQR 254
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG-FEPEGSTI 390
+ A + F E G + VT+ +++G C+ G +++A+ +Y+DM R+ +P+ T
Sbjct: 255 RVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTY 314
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM- 449
LI L R +A ++ + ++ G P +Y L+ GLC+ G ++A+++ +M
Sbjct: 315 SALINGLNLSNRGEKAYELYE-EMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMG 373
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
VG +P++ Y+ ID + K + A L KEM
Sbjct: 374 VGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEM 408
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 126/247 (51%), Gaps = 4/247 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V T+ AL+ G ++ ++ D++ E GC P +Y+ ++ C+ R+ A
Sbjct: 236 IYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENAL 295
Query: 303 KLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L+++M R+ +++ D+ Y+ +I G +A E + EM +G VT+ L++G
Sbjct: 296 TLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDG 355
Query: 362 YCRAGDVDSAILVYNDMCRKGF-EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
C++G D A+ ++ M +P T VLI C R+ +A+ + K + L
Sbjct: 356 LCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGR-SLL 414
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P ++ +I+ LC+E +++EA ++ E +GK +P +++ + GY K ++ A L
Sbjct: 415 PDAVTFTTVIQKLCKESRIDEAHEL-FESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKL 473
Query: 481 RKEMFEN 487
M ++
Sbjct: 474 HDRMLDS 480
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 113/244 (46%), Gaps = 5/244 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ ++ ++ G + +K ++ +M PD +Y L+ ++RR++EA L
Sbjct: 203 PNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDL 262
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG-VESSSVTFEHLVNGYC 363
+EE R K VV YNT+I G C+ G + A + +M ++ T+ L+NG
Sbjct: 263 FEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLN 322
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ + A +Y +M G P+ T L+ LC +A++I + V P
Sbjct: 323 LSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNV 382
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI C+ ++ +A+K+ EM G+ P ++ I KE ++ A E
Sbjct: 383 ITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEA----HE 438
Query: 484 MFEN 487
+FE+
Sbjct: 439 LFES 442
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 7/204 (3%)
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
++ + L++V+ + RR+ +A ++ E D V+YNT++ GF + G++ +A F E
Sbjct: 103 FTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGE 162
Query: 343 MGLSGVESSSVTFEH--LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
M SG+ +V H ++ G C G + A V+ DM F P + ++I LC
Sbjct: 163 MKDSGI---AVLRSHNIVLRGLCSGGKISMAWEVFKDM-SGIFSPNLISYTIMIDGLCKS 218
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
R+V +A+ + K V K ++P +Y LI GL ++ +++EA + E KG P++
Sbjct: 219 RKVDKAITLFKQMVDK-AIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVT 277
Query: 461 YSAFIDGYMKEGNVEMATMLRKEM 484
Y+ IDG K G +E A L +M
Sbjct: 278 YNTMIDGLCKCGRIENALTLYDDM 301
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 41/303 (13%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C ++ +Y T+I L + I A + +R P P + + L+
Sbjct: 271 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALING---------- 320
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
L + N + E ++ ++ G S V T N L+ + + EI+R
Sbjct: 321 --------LNLSN--RGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFR 370
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
++ G+G PNV T+ L+ F + + EM P
Sbjct: 371 KM---------GVGN------VCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLP 415
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D +++ ++ C+E R+ EA +L+E + K + D V +NT++ G+C+I + A++
Sbjct: 416 DAVTFTTVIQKLCKESRIDEAHELFESI-GKTCKPDSVLFNTMLAGYCKITRIDDAKKLH 474
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
M SG + T+ LV G+CR G A+++Y++M GF PE + EL D+
Sbjct: 475 DRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERH-----LAELVDR 529
Query: 401 RRV 403
R
Sbjct: 530 TRT 532
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 9/192 (4%)
Query: 297 RMREAEKLWEEM----RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
R+ + WE + H+ N ++ + + + A FF+ + E
Sbjct: 78 RIPDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDE 137
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
V++ L+NG+ +AGDV A+ ++ +M G S VL G LC ++ A ++ K
Sbjct: 138 VSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRSHNIVLRG-LCSGGKISMAWEVFKD 196
Query: 413 RVVKFGLF-PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
G+F P SY +I GLC+ K+++A+ + +MV K P + Y A IDG K+
Sbjct: 197 MS---GIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQ 253
Query: 472 GNVEMATMLRKE 483
V+ A L +E
Sbjct: 254 RRVKEAYDLFEE 265
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 185/422 (43%), Gaps = 41/422 (9%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI 128
++P + +N +A RFF + + + HS+ +Y T+I L++ R D+I
Sbjct: 20 VSPEIVEDVLRRFENAGMVAYRFFEWAEKQLHYTHSVRAYHTMIESLAKIRQYQIMWDLI 79
Query: 129 RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLM 188
R + ++ F ++++ Y +K+E V ++
Sbjct: 80 NAMKR--KRMLNVETFCIIMRKYARA--------------------QKLEEAVYTFNVME 117
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVH 248
+ ++ N L + + K V EI+ DS KD R P+
Sbjct: 118 KYDVPPNLAAFNGLFSALCKSKNVRKAQEIF------DS------SKD-----RFVPDSK 160
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+ L+ G+ + K +++ EM +GC PD +Y +++ + C+ R+ EA + +EM
Sbjct: 161 TYTILLEGWGKTPNLPKAREIFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEM 220
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ Y+ +I + + A + F M +GV++ + L+ +C+
Sbjct: 221 DLTICKPTSFIYSVLIHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKF 280
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ V N+M KG +P T+ +++ L + EA + + R++K P +Y
Sbjct: 281 KNVYRVLNEMDYKGMQPNSRTLNIILNNLIARGETDEAFRVFR-RMIKV-CEPDADTYTM 338
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+IK CE ++E ALKV M K F PS+ +S I+G +EG+V A ++ ++M E
Sbjct: 339 MIKMFCERNELEMALKVWKYMKKKHFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKG 398
Query: 489 VR 490
+R
Sbjct: 399 IR 400
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 87/223 (39%), Gaps = 39/223 (17%)
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W E + + H V AY+T+I +I + + M + + TF ++ Y R
Sbjct: 45 WAE-KQLHYTHSVRAYHTMIESLAKIRQYQIMWDLINAMKRKRMLNVE-TFCIIMRKYAR 102
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A ++ A+ +N M + P + L LC + V +A +I + +F P K
Sbjct: 103 AQKLEEAVYTFNVMEKYDVPPNLAAFNGLFSALCKSKNVRKAQEIFDSSKDRF--VPDSK 160
Query: 425 SYMFLIKG-----------------------------------LCEEGKMEEALKVQAEM 449
+Y L++G LC+ G+++EAL + EM
Sbjct: 161 TYTILLEGWGKTPNLPKAREIFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEM 220
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+P+ IYS I Y E +E A M +N V+ +
Sbjct: 221 DLTICKPTSFIYSVLIHTYGIENRIEDAVDTFLGMEKNGVKAD 263
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 135/261 (51%), Gaps = 21/261 (8%)
Query: 245 PNVHTFNALMVGFYREGA-FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
P+ T++ + +GF + + EK ++ EM R G P Y+Y++L+ FC+ +++A K
Sbjct: 458 PDDSTYSKV-IGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARK 516
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++EM K +VV Y +I + + +M A+E F M L G + + VT+ L++G+C
Sbjct: 517 WFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHC 576
Query: 364 RAGDVDSAILVYNDMCRKGFE-----------------PEGSTIEVLIGELCDKRRVFEA 406
+AG ++ A +Y M R E P T L+ LC RV EA
Sbjct: 577 KAGQIEKACQIYARM-RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEA 635
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
++L ++ G P + Y +I G C+ GK+++A +V +M +G+ P+L YS+FID
Sbjct: 636 HELLDT-MLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFID 694
Query: 467 GYMKEGNVEMATMLRKEMFEN 487
K+ +++ + +M EN
Sbjct: 695 CLFKDNRLDLVLKVLSKMLEN 715
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 120/248 (48%), Gaps = 11/248 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+ L+ G R+G + + + M GC P+ ++ L+ +C+ R A KL
Sbjct: 312 PNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKL 371
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA------EEFFREMGLSGVESSSVTFEHL 358
+++M + + YN IG C E + E+ + EM GV + V +
Sbjct: 372 FKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNF 431
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
C AG D A + +M KGF P+ ST +IG LCD +V +A + + + + G
Sbjct: 432 ARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFE-EMKRNG 490
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ P+ +Y LI C+ G +++A K EM+ KG P++ Y+A I Y+K + +A
Sbjct: 491 IVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVA- 549
Query: 479 MLRKEMFE 486
E+FE
Sbjct: 550 ---DELFE 554
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 121/241 (50%), Gaps = 5/241 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN ++A++ GF + G + ++V+ +M+ G P+ Y+YS + ++ R+ K+
Sbjct: 649 PNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKV 708
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M + + +VV Y ++ G C+IG+ A + +M G + VT+ +++G+ +
Sbjct: 709 LSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGK 768
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE- 423
+G ++ + ++ DMC KG P T VLI C + EA +L +K +P
Sbjct: 769 SGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDE--MKQTYWPKHI 826
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
S+ +I+G +E ++ + E+ P +Y ID Y+K G +E+A L +E
Sbjct: 827 LSHRKIIEGFSQE--FITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEE 884
Query: 484 M 484
+
Sbjct: 885 I 885
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 17/257 (6%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEM---------------ARLGCE-PDCYSYSV 287
+PNV T+ AL+ G + G EK ++ M CE P+ +Y
Sbjct: 562 KPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGA 621
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ C+ R++EA +L + M E + + Y+ +I GFC+IG++ A+E F +M G
Sbjct: 622 LVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERG 681
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ T+ ++ + +D + V + M P ++ LC + EA
Sbjct: 682 YSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAY 741
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++ ++ + G P +Y +I G + GK+E+ L++ +M KG P+ Y I+
Sbjct: 742 KLM-LKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINH 800
Query: 468 YMKEGNVEMATMLRKEM 484
G ++ A L EM
Sbjct: 801 CCSNGLLDEAYKLLDEM 817
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 5/215 (2%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD Y+ +++ CE EA + MR + +VV Y ++ G G++ R +
Sbjct: 277 PDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRI 336
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC- 398
M G + F L++ YC++ D A ++ M + G +P + IG +C
Sbjct: 337 LSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCS 396
Query: 399 -DKRRVFEALDILK---ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+++ + LD+++ + ++ G+ + + + LC GK ++A K+ EM+GKGF
Sbjct: 397 NEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGF 456
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
P YS I VE A L +EM N +
Sbjct: 457 VPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGI 491
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 22/245 (8%)
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
VE + EM LG + + S C + +A K+ EM K D Y+ +IG
Sbjct: 409 VEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIG 468
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
C+ ++ +A F EM +G+ S T+ L++ +C+AG + A +++M KG P
Sbjct: 469 FLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTP 528
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
T LI +++ A ++ + +++ G P +Y LI G C+ G++E+A ++
Sbjct: 529 NVVTYTALIHAYLKAKQMPVADELFEMMLLE-GCKPNVVTYTALIDGHCKAGQIEKACQI 587
Query: 446 QAEMVG--------KGFE--------PSLEIYSAFIDGYMKEGNVEMA-----TMLRKEM 484
A M G K F+ P++ Y A +DG K V+ A TML
Sbjct: 588 YARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGC 647
Query: 485 FENQV 489
NQ+
Sbjct: 648 EPNQI 652
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 17/209 (8%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+ A++ GF + G E+ +++ +M GC P+ +Y VL+ C + EA KL
Sbjct: 754 PNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKL 813
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL----SGVESSSVT--FEHL 358
+EM+ ++++ II GF ++EF +GL S ES V + L
Sbjct: 814 LDEMKQTYWPKHILSHRKIIEGF--------SQEFITSIGLLDELSENESVPVDSLYRIL 865
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI--EVLIGELCDKRRVFEALDILKARVVK 416
++ Y +AG ++ A+ + ++ + LI L +V +AL+ L A ++
Sbjct: 866 IDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALE-LYASMIS 924
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+ P + LIKGL + K +EAL++
Sbjct: 925 KNVVPELSILVHLIKGLIKVDKWQEALQL 953
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 34/217 (15%)
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K E++D + E N ++ C G A E + G + S T+ L+ +
Sbjct: 162 KFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVF 221
Query: 363 CRAGDVDSAILVYNDM------------------------CRKGFE---------PEGST 389
RA +D+A LV +M CR+ F+ P+
Sbjct: 222 LRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDFVPDTVF 281
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
++ LC+ EA+DIL R+ P +Y L+ G +G++ ++ + M
Sbjct: 282 YNRMVSGLCEASLFEEAMDILH-RMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMM 340
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ +G P+ EI+++ I Y K + A L K+M +
Sbjct: 341 ITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIK 377
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 188/436 (43%), Gaps = 43/436 (9%)
Query: 33 PPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFF 92
PP+D + + S T H+ LLS + TP + + L N+ AL+FF
Sbjct: 21 PPADSAAIAKLILSSPNTTHQDDQ---FLLSTKTTPWTPNLVNSVLKRLWNHGPKALQFF 77
Query: 93 SF-TQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY 151
F H H SS+ I I +R L +I +RS P K F ++ + Y
Sbjct: 78 HFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIH-RMRSLRIGPSPKTFAIVAERY 136
Query: 152 RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
G K + V + + G +++ N ++ + + K
Sbjct: 137 ASAG--------------------KPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
V YE++R + G R + T+N ++ G+ K +V
Sbjct: 177 VEKAYELFRALRG-----------------RFSVDTVTYNVILNGWCLIKRTPKALEVLK 219
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM G P+ +Y+ ++ F ++R A + + EM+ ++ E DVV Y T++ GF G
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 279
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
E+ RA F EM GV S T+ ++ C+ +V++A++++ +M R+G+EP +T
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
VLI L F + L R+ G P ++Y +I+ E ++E+AL + +M
Sbjct: 340 VLIRGLFHAGE-FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
Query: 452 KGFEPSLEIYSAFIDG 467
P+L+ Y+ I G
Sbjct: 399 GDCLPNLDTYNILISG 414
>gi|224093900|ref|XP_002310039.1| predicted protein [Populus trichocarpa]
gi|222852942|gb|EEE90489.1| predicted protein [Populus trichocarpa]
Length = 507
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 167/380 (43%), Gaps = 59/380 (15%)
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL 143
NP AL FF+FT + HS S T+++IL R+R DV+ R N +
Sbjct: 88 NPLQALDFFNFTADRRGFYHSSYSLDTMLYILGRSRKFDHIWDVLIDIKRKDRNLITPRT 147
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCC---LEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
+V V + K C + V++ K + V + S N
Sbjct: 148 LQV-------------VLGRVAKVCSVRMTVESFWKFKRLVPVF----------DTSCFN 184
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
AL+ + + K + +Y + G RPN+ TFN L+ G+
Sbjct: 185 ALLRTLCQEKSMSDARNVYHHL-------KKGF----------RPNLQTFNILLSGW--- 224
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
+ E+ E + EM LG +PD +Y+ L+ VFC+ R + +A + MR++++ DV+ Y
Sbjct: 225 KSSEEAELFYEEMKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVARMREEDILPDVITY 284
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
+IIGG +G+ +A + +EM G + ++ YC A +D+A + +M
Sbjct: 285 TSIIGGLGLVGQPDKARDMLKEMKEHGCYPDVAAYNAVIRNYCIAKRLDAAYSLMAEMES 344
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILK------ARVVKFGLFPTEKSYMFLIKGLC 434
KG P ++ + RVF + L+ R++ G P +S MFLIK
Sbjct: 345 KGMSPNATSYNLFF-------RVFSWSNDLRNSWDFYGRMMDAGCLPNTQSCMFLIKLFK 397
Query: 435 EEGKMEEALKVQAEMVGKGF 454
K+E AL++ +MV KGF
Sbjct: 398 RHEKVEMALQLWNDMVEKGF 417
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 6/200 (3%)
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
VE W + RL D ++ L+ C+E+ M +A ++ ++ K ++ +N ++
Sbjct: 165 VESFW-KFKRLVPVFDTSCFNALLRTLCQEKSMSDARNVYHHLK-KGFRPNLQTFNILLS 222
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
G+ E AE F+ EM GV+ VT+ L++ +C+ +++ A V M + P
Sbjct: 223 GWKSSEE---AELFYEEMKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVARMREEDILP 279
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+ T +IG L + +A D+LK + + G +P +Y +I+ C +++ A +
Sbjct: 280 DVITYTSIIGGLGLVGQPDKARDMLK-EMKEHGCYPDVAAYNAVIRNYCIAKRLDAAYSL 338
Query: 446 QAEMVGKGFEPSLEIYSAFI 465
AEM KG P+ Y+ F
Sbjct: 339 MAEMESKGMSPNATSYNLFF 358
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 189/458 (41%), Gaps = 48/458 (10%)
Query: 60 HLLSLCRSGLTPTQ--FSQIALGLKNNPHLA--LRFFSFTQHKSLCKHSLSSYATIIHIL 115
HL SL R+G P ++ +G LA R F + C + +Y ++H L
Sbjct: 94 HLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRG-CVRTAFTYTALLHGL 152
Query: 116 SRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSA------------------ 157
A ++ A V +++ P ++ +V CG+
Sbjct: 153 CGAGMVREAMSVF-AGMQADGCAPDPHVYATMVHGL--CGAGRTREAETLLSDAMAEGFE 209
Query: 158 --PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISG 215
V++ LI N+ +E VD+ + G S V T LI G
Sbjct: 210 PNVVVYNALID---GYCNVGDLELAVDVFERMDVNGCSPNVRTYTELI------SGFCKS 260
Query: 216 YEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
++ R + AG+ PNV T+ AL+ G +G + + M
Sbjct: 261 RKLDRAMMLFSRMVDAGL----------VPNVVTYTALIQGQCSDGQLDCAYRLLQSMEN 310
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G P+ ++ SVL+ C+ R+ EA+ L + K ++ + + Y ++I G C+ G A
Sbjct: 311 SGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAA 370
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A+ + + G + T+ L++G CR ++ A+LV +DM KG +P T ++I
Sbjct: 371 ADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIID 430
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
EL + + IL +++ G+ P +Y ++ C EG+ME+A + MV G
Sbjct: 431 ELVREVGADGSKKILD-KMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVC 489
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
P+L Y+A I GY G A K M N + +
Sbjct: 490 PNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNE 527
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 111/280 (39%), Gaps = 36/280 (12%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD------------------------ 281
N+ T+ L+ + G + + R G PD
Sbjct: 71 NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130
Query: 282 -----------CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
++Y+ L+ C +REA ++ M+ D Y T++ G C
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G AE + G E + V + L++GYC GD++ A+ V+ M G P T
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTY 250
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
LI C R++ A+ +L +R+V GL P +Y LI+G C +G+++ A ++ M
Sbjct: 251 TELISGFCKSRKLDRAM-MLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSME 309
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
G P+ S ID K V A +L + + ++
Sbjct: 310 NSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIK 349
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 144/363 (39%), Gaps = 68/363 (18%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+++ L+S+G T ++LI + R K E+ + LD G
Sbjct: 374 LMQTLVSQGFVPDAHTYSSLIDGLCRQK------ELSEAMLVLDDMMEKG---------- 417
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+ T+ ++ RE + + + +M G +PD ++Y++ + +C E RM +AE
Sbjct: 418 VQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAE 477
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV----ESSSVTFEHL 358
+ M D V ++V YN +I G+ +G ++A F+ M +G ES +V L
Sbjct: 478 HMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLL 537
Query: 359 V-----------------------------------------------NGYCRAGDVDSA 371
+ CR +D A
Sbjct: 538 IKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEA 597
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
++ +M P +I C + + EAL + + +VK G P +SY +I
Sbjct: 598 KILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDS-MVKSGYIPQLESYRHIIS 656
Query: 432 GLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
LCEEG ++ A +V +M+ K + + IDG +++G V + L M E R
Sbjct: 657 SLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRP 716
Query: 492 EDG 494
D
Sbjct: 717 SDA 719
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 90/250 (36%), Gaps = 52/250 (20%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF---------- 292
V PN+ T+NAL+ G+ G + + M GC+P+ SY+VL+ +
Sbjct: 488 VCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIP 547
Query: 293 -----------------------------------------CEERRMREAEKLWEEMRDK 311
C R+ EA+ L EM+
Sbjct: 548 ANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSA 607
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
N+ Y +II C + + A F M SG ++ H+++ C G + +A
Sbjct: 608 NLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTA 667
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
V+ DM K + E +LI L K V E +L K P++ Y L
Sbjct: 668 KQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEK-NYRPSDALYARLTG 726
Query: 432 GLCEEGKMEE 441
+ + ++E
Sbjct: 727 KITDANDIQE 736
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 161/319 (50%), Gaps = 14/319 (4%)
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
+T + I+ +L G + K++ ++ ++ + KGV +++ V +DS AGI ++
Sbjct: 153 DTHLKIIEIL---GRASKLNHARCILLDMPK-KGVEWDEDLF--VLLIDSYGKAGIVQES 206
Query: 238 KRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+V + V + +++AL R G + + + M G P C++Y++++
Sbjct: 207 VKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWG 266
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
F ++ A + +EEM+++ + DVV YNT+I G+ I +M AE+FF EM +E +
Sbjct: 267 FFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPT 326
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+++ ++ GY G VD + ++ +M G +P T L+ LCD ++ EA +++K
Sbjct: 327 VISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVK 386
Query: 412 ARVVKFGLFPTEKS-YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
V ++ + P + S +M LI C+ G+++ A V M+ Y I+ + K
Sbjct: 387 EMVERY-IAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCK 445
Query: 471 EGNVEMATMLRKEMFENQV 489
G + A L ++ E ++
Sbjct: 446 SGVYDRAVKLLDKLIEKEI 464
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/468 (22%), Positives = 187/468 (39%), Gaps = 81/468 (17%)
Query: 80 GLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDP 139
G +N+ H AL+FF + + L +H ++ II IL RA + AR ++ L P+
Sbjct: 128 GSRNSDH-ALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCIL---LDMPKKGV 183
Query: 140 KLK--LFEVLVKTYRECG---SAPFVFDLLIKCCLEVKNIEKIETCVDIV----RMLMSR 190
+ LF +L+ +Y + G + VF + + +E + I+ + ++ R +M++
Sbjct: 184 EWDEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVE-RTIKSYDALFKVILRRGRYMMAK 242
Query: 191 ---------GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
G+ T N +IW V + + E+ +
Sbjct: 243 RYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEM----------------KER 286
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ P+V T+N ++ G+YR E+ E +VEM EP SY+ ++ + R+ +
Sbjct: 287 RISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDG 346
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE-SSSVTFEHLVN 360
+L+EEM+ ++ + V Y+T++ G C+ +M A+ +EM + + F L+
Sbjct: 347 LRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLIT 406
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
C+AG +D+A V M R E VLI C A+ +L + K +
Sbjct: 407 CQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIIL 466
Query: 421 PTEKS-----------------------------------------YMFLIKGLCEEGKM 439
+ S + LI+G +EG
Sbjct: 467 RPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPIAFNNLIRGHSKEGAP 526
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
E A ++ M + + Y I+ ++K+G A M EN
Sbjct: 527 ESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIEN 574
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 10/227 (4%)
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE----ERRMREAEKLWEE---MRDK 311
+ G + DV M RL + Y VL+ FC+ +R ++ +KL E+ +R +
Sbjct: 410 KAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQ 469
Query: 312 N-VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
N +E + YN II C G+ ++AE FR++ GV+ + F +L+ G+ + G +S
Sbjct: 470 NSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQ-DPIAFNNLIRGHSKEGAPES 528
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A + M R+ E +LI K +A L +++ G P + ++
Sbjct: 529 AFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDG-MIENGHIPDSSLFRSVM 587
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ L E+G+++ A +V MV KG + ++++ + ++ + G+VE A
Sbjct: 588 ESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEA 634
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 145/336 (43%), Gaps = 32/336 (9%)
Query: 170 EVKNIEKIETCVDIVRMLMSRGLSVKVSTC---------NALIWEVSRGKGVISGYEIYR 220
+++N EKIE I RM+ +R + ++ ++L+W V G
Sbjct: 82 KLRNPEKIEDI--ICRMMANRAWTTRLQNSIRSLVPQFDHSLVWNVLHG----------- 128
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
+SD + V+R R + T ++ R + ++M + G E
Sbjct: 129 ---SRNSDHALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCILLDMPKKGVEW 185
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D + +L+ + + ++E+ K++++M++ VE + +Y+ + G A+ +F
Sbjct: 186 DEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYF 245
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
M GV + T+ ++ G+ + V++A + +M + P+ T +I
Sbjct: 246 NAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRI 305
Query: 401 RRVFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+++ EA +K R ++ PT SY +IKG G++++ L++ EM G +P+
Sbjct: 306 KKMEEAEKFFVEMKGRNIE----PTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPN 361
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
YS + G + A + KEM E + +D
Sbjct: 362 AVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKD 397
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 12/238 (5%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
FN L+ G +EGA E ++ M R + +Y +L+ F ++ +A+ + M
Sbjct: 512 AFNNLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGM 571
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ D + +++ E G + A M GV+ + ++ G V
Sbjct: 572 IENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHV 631
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL----FPTEK 424
+ A+ + + G EP+ + L+ LC K + AL +L FGL +
Sbjct: 632 EEALGRIDLLMNNGCEPD---FDGLLSVLCAKGKTIAALKLL-----DFGLERDYNISFS 683
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY ++ L GK A + +++ KG I +EGN + A +L +
Sbjct: 684 SYENVLDALLTAGKTLNAYSILCKIMQKGGATDWSSCKDLIRSLNEEGNTKQADILSR 741
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 92/223 (41%), Gaps = 5/223 (2%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N ++ G K E ++ ++ + G + D +++ L+ +E A ++ + M
Sbjct: 479 YNLIIEYLCNSGQTSKAETLFRQLMKKGVQ-DPIAFNNLIRGHSKEGAPESAFEILKIMG 537
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ V + AY +I F + GE A A+ M +G S F ++ G +
Sbjct: 538 RREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQ 597
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+A V N+M KG + + ++ L + V EAL R+ E + L
Sbjct: 598 TASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEAL----GRIDLLMNNGCEPDFDGL 653
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ LC +GK ALK+ + + + S Y +D + G
Sbjct: 654 LSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAG 696
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 143/309 (46%), Gaps = 17/309 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++ + ++ ++ RG + V T N L+ +G+G YR+ L
Sbjct: 22 QVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRG-------YRQAMEL---------I 65
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ R PN T+N LM G EG + ++ + GC+P +Y+ ++ C
Sbjct: 66 DLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSA 125
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R +A++L EM +N + +N +I C G + +A + +M G ++ VT+
Sbjct: 126 ERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTY 185
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
++NG C +VD A+ + + M G +P+ T L+ LC R +A +++ +
Sbjct: 186 NAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMD-NMT 244
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ G P ++ LI LC++G M +A++V +M KG P+ YS I G K ++
Sbjct: 245 QNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 304
Query: 476 MATMLRKEM 484
A L EM
Sbjct: 305 QALELFNEM 313
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 116/227 (51%), Gaps = 2/227 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ T+NA++ G + + + +M GC+PD +Y+ L+ C R +AE+L
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELM 240
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M D V +NT+IG C+ G M A E F++M G +S+T+ +++G +A
Sbjct: 241 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 300
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+D A+ ++N+M KGF P+ ++L L D + EA+ ++ ++ G+ P
Sbjct: 301 TKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVR-KLQDSGISPHTVL 358
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
Y ++ GLC GK E A+ + A MV G P Y I+G EG
Sbjct: 359 YNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEG 405
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 120/248 (48%), Gaps = 7/248 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+PN +T+N L+ G V +M GC PD +Y++L+ C+ R R+A
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L + MR + + V YN ++ G C G++ A E R + G + S+V + ++ G
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 363 CRA---GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
C A GD D + +M R+ P +T V+I LC K + +A+ +L+ ++ K G
Sbjct: 123 CSAERWGDADELV---TEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLE-KMSKHGC 178
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
+Y +I GLCE+ ++ A+ + ++M G +P + Y+ + G A
Sbjct: 179 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEE 238
Query: 480 LRKEMFEN 487
L M +N
Sbjct: 239 LMDNMTQN 246
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 116/249 (46%), Gaps = 2/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TFN ++ R+G ++ + +M++ GC + +Y+ ++ CE+R + A L
Sbjct: 145 PNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL 204
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M+ + D+V YNT++ G C AEE M +G +VTF L+ C+
Sbjct: 205 LSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQ 264
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + AI V+ M KG P T +I L ++ +AL++ K F +K
Sbjct: 265 KGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG--FNPDK 322
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y L + L ++ +EEA++ ++ G P +Y+A + G + G E A + M
Sbjct: 323 IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYM 382
Query: 485 FENQVRQED 493
+ +D
Sbjct: 383 VSSGCMPDD 391
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 146/343 (42%), Gaps = 41/343 (11%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN-DPKLKLFEVLVKTYRECGSAPF 159
CK S +Y T++ L A G A +++ LR EN P F V++ Y C
Sbjct: 108 CKPSTVNYNTVLKGLCSAERWGDADELVTEMLR--ENCPPNEATFNVVI--YSLCRKG-- 161
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
++ + ++ + G + + T NA+I + + V
Sbjct: 162 ----------------LLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNV------- 198
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
D G+ +K +P++ T+N L+ G + E++ M + GC
Sbjct: 199 --------DGAMGLLSKMKSY-GCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCL 249
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +++ L+ C++ M +A +++++M DK + + Y+TII G + ++ +A E
Sbjct: 250 PDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALEL 309
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F EMG G + ++ L ++ AI + G P ++ LC
Sbjct: 310 FNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCR 368
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+ A+DI+ A +V G P + +Y+ LI+GL EG + EA
Sbjct: 369 NGKTEFAIDIM-AYMVSSGCMPDDLTYVILIEGLAYEGYLNEA 410
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ +NA+++G R G E D+ M GC PD +Y +L+ E + EA
Sbjct: 352 ISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEAR 411
Query: 303 KLWEEMRDKNV 313
+L ++ ++V
Sbjct: 412 ELLIKLCSRDV 422
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/505 (21%), Positives = 213/505 (42%), Gaps = 87/505 (17%)
Query: 33 PPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFF 92
PPS N + T ++ + HH + +H + G+ P ++ + + + + HL F
Sbjct: 58 PPSTVDFNKLLTSIAKMKHHSTLLSLSHQMD--SFGIPPNIYT-LHILINSFCHLNRVGF 114
Query: 93 SFTQHKSLCK----HSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
+F+ + K +++ T+I + IG A L LF+ ++
Sbjct: 115 AFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEA----------------LHLFDKMI 158
Query: 149 KTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
G P V + LI +V N + ++ ++ + V N +I +
Sbjct: 159 GE----GFRPDVVTYGTLINGLCKVGN---TSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 211
Query: 207 SRGKGVISGYEIYREVFGLDSDATAGIGKDV----------------KRVV--------- 241
+ + V + ++ E+ T GI D+ K V
Sbjct: 212 CKDRQVTEAFNLFSEM------VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS 265
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V +FN ++ +EG + DV +M + G EP+ +Y+ LM C M EA
Sbjct: 266 KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEA 325
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF-------------------FRE 342
K+++ M K +V++YNT+I G+C+I + +A + F
Sbjct: 326 VKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDT 385
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G + +++ L+NGYC+ +D A+ ++ +MCR+ P+ T LI LC R
Sbjct: 386 MVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVER 445
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ +A+ + +V P +Y L+ LC+ + EA+ + + G +P +++ +
Sbjct: 446 LQDAIALFH-EMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNN 504
Query: 463 AFIDGYMKEGNVEMATMLRKEMFEN 487
IDG + G +E A +++F N
Sbjct: 505 IAIDGMCRAGELEAA----RDLFSN 525
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 159/356 (44%), Gaps = 26/356 (7%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRG-LSVKVS 197
P + +L+ ++ F F +L K L++ + T ++R + G + +
Sbjct: 94 PNIYTLHILINSFCHLNRVGFAFSVLAKI-LKLGHQPDTATFTTLIRGICVEGKIGEALH 152
Query: 198 TCNALIWEVSRGKGVISGYEIYREV-FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVG 256
+ +I E R V G I G S A +G V++ +PNV +N ++
Sbjct: 153 LFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK--NCQPNVFAYNTIIDS 210
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
++ + +++ EM G PD ++Y+ L+ C + L EM D + D
Sbjct: 211 LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 270
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
VV++NT++ C+ G++ A + +M GVE + VT+ L++G+C ++D A+ V++
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFD 330
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
M KG P + LI C +R+ +A+ Y L+ C
Sbjct: 331 TMVCKGCMPNVISYNTLINGYCKIQRIDKAI-----------------HYTXLMDXXCCY 373
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
M+EA+KV MV KG P++ Y+ I+GY K ++ A L EM RQE
Sbjct: 374 LNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM----CRQE 425
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 3/254 (1%)
Query: 238 KRVVRVRPNVHT--FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R++R++P T FN L+ + + + +M G P+ Y+ +L+ FC
Sbjct: 50 NRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHL 109
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ A + ++ + D + T+I G C G++ A F +M G VT+
Sbjct: 110 NRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTY 169
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+NG C+ G+ +AI + M +K +P +I LC R+V EA ++ V
Sbjct: 170 GTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVT 229
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K G+ P +Y LI LC + + + EMV P + ++ +D KEG V
Sbjct: 230 K-GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 288
Query: 476 MATMLRKEMFENQV 489
A + +M + V
Sbjct: 289 EAHDVVDKMIQRGV 302
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 109/228 (47%), Gaps = 1/228 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV ++N L+ G+ + +K ++ EM R PD +YS L+ C R+++A L
Sbjct: 393 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 452
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM + ++V Y ++ C+ +A A + + S ++ ++G CR
Sbjct: 453 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCR 512
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG++++A +++++ KG +P+ T ++I LC + + EA + + + + G
Sbjct: 513 AGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFR-EMDENGCTLNGC 571
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
Y + +G + A+++ EMV +GF + F+ +G
Sbjct: 572 IYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 619
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 126/257 (49%), Gaps = 10/257 (3%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR---M 298
RV P++ TFN ++ G + G K DV ++ G P +Y+ ++ +C+ R M
Sbjct: 180 RVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRM 239
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+ L +EM + + + V +N ++ G+C+ A A F EM G+ +S VT+ L
Sbjct: 240 YHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSAL 299
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA---LDILKARVV 415
V G C G V+ + + ++M G P +T+ ++ C K + +A +D ++ + V
Sbjct: 300 VWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNV 359
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K P +Y L+ G KM++AL V+ M GKG P+ IY+ I G+ + G+
Sbjct: 360 K----PNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWR 415
Query: 476 MATMLRKEMFENQVRQE 492
+ L EM VR +
Sbjct: 416 SVSGLLDEMRMKGVRAD 432
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 155/336 (46%), Gaps = 25/336 (7%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI-WEVSRGKGVISGYE 217
F F+++I + + K D+ + + + GL+ V T N +I RG+
Sbjct: 186 FTFNIVISGLCKTGQLRKAG---DVAKDIRAWGLAPSVVTYNTIIDGYCKRGRA----GR 238
Query: 218 IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
+Y L AGI PN TFN L+ G+ ++ V+ EM + G
Sbjct: 239 MYHVDALLKEMVEAGIS----------PNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQG 288
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
+YS L+ C E ++ E KL +EM+D + ++ N+++ GFC+ G M AE
Sbjct: 289 IAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAE 348
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+ M V+ + VT+ LV+GY R + A+ V M KG P LI
Sbjct: 349 GWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGF 408
Query: 398 C---DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
D R V LD ++ + V+ + +Y LI LC +G++ +A+K+ EM+ G
Sbjct: 409 TRNGDWRSVSGLLDEMRMKGVRADIV----TYNVLIGALCVKGEVRKAVKLLDEMLMVGL 464
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
EP Y+ I+GY ++GN++ A +R M + + R
Sbjct: 465 EPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKR 500
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 153/331 (46%), Gaps = 24/331 (7%)
Query: 145 EVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
+ L+K E G +P F++L+ + N V + + +G++ V T +AL
Sbjct: 243 DALLKEMVEAGISPNEVTFNVLVNGYCKDSNTA---AAVRVFEEMKQQGIAASVVTYSAL 299
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
+W + V G ++ E+ KD+ V PN+ T N+++ GF ++G
Sbjct: 300 VWGLCSEGKVEEGVKLVDEM------------KDLGLV----PNLATLNSVLNGFCKKGM 343
Query: 263 FEKVEDVWVE-MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
E W++ M + +P+ +Y++L+ + +M++A + E M K V + YN
Sbjct: 344 MTDAEG-WIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYN 402
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
+I GF G+ EM + GV + VT+ L+ C G+V A+ + ++M
Sbjct: 403 CLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMV 462
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G EP T +I C+K + A +I + R+ K +Y IK LC GKMEE
Sbjct: 463 GLEPVHLTYNTIINGYCEKGNIKSAYEI-RTRMEKGKKRANVVTYNVFIKCLCRMGKMEE 521
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
++ EM+ KG P+ Y +G M++G
Sbjct: 522 TNELLNEMLEKGLVPNGVTYDTIKEGMMEKG 552
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 100/196 (51%), Gaps = 4/196 (2%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P +S + L++ R+ AE+ ++ + V D+ +N +I G C+ G++ +A +
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207
Query: 340 FREMGLSGVESSSVTFEHLVNGYC---RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+++ G+ S VT+ +++GYC RAG + + +M G P T VL+
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
C A+ + + + + G+ + +Y L+ GLC EGK+EE +K+ EM G P
Sbjct: 268 YCKDSNTAAAVRVFE-EMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326
Query: 457 SLEIYSAFIDGYMKEG 472
+L ++ ++G+ K+G
Sbjct: 327 NLATLNSVLNGFCKKG 342
>gi|449488446|ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11710, mitochondrial-like [Cucumis sativus]
Length = 653
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 214/487 (43%), Gaps = 57/487 (11%)
Query: 55 KSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHI 114
+ RW L + S LT + ++ +N+P LAL F+++ + + HSL S T++H+
Sbjct: 43 QRRWKFLEQVSPS-LTNSLVCRVVREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHV 101
Query: 115 LSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNI 174
L +R A ++ + P L++ L+ +Y C S P VF ++ C +++++
Sbjct: 102 LVNSRNFNDALSIMESLILXNGKSP-LEVLGGLMNSYEICNSNPAVFXARVRTCTQLRSV 160
Query: 175 EKIETCVDIVRM--------------------------------LMSRGLSVKVSTCNAL 202
E + +R+ +++ G S V+T N +
Sbjct: 161 EGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFXNMYKEMIASGYSENVNTFNLI 220
Query: 203 IWEVSRGKGVISGY---------EIYREV--FGLDSDATAGIGK-----------DVKRV 240
I+ + ++ EI+ V F + D +G+ +V
Sbjct: 221 IYALCNECKLLEAIYVVYLMLKIEIWPNVVTFNMIIDKANKMGEMDLALKLTRNTEVISG 280
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V PN+ +N ++ GF + E ++V EM +LG + +Y+ L+ + + +
Sbjct: 281 GSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYATLIDGYARKGSLDV 340
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +L +EM + + D YN++I GE+ A +M + T+ L
Sbjct: 341 AFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTK 400
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C +G ++ A+ V+ + + + T +LI + R + A +L + +V G+
Sbjct: 401 GLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVG-GIK 459
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y + G C+EGK+E A+++ + V + +L +Y++ +DG K+G++ A +L
Sbjct: 460 PDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIYAAKLL 519
Query: 481 RKEMFEN 487
++ +N
Sbjct: 520 VDKLQQN 526
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 118/244 (48%), Gaps = 2/244 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+R+ P+ +N+L+ Y EG E+ + +M PD ++YS+L C + +
Sbjct: 351 MRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTKGLCVSGHLNK 410
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A ++ + ++++ D YN +I + +A A++ M + G++ VT+ V+
Sbjct: 411 ALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVD 470
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G+C+ G +++A+ +Y+ + + ++ LC + ++ A +L ++ + G F
Sbjct: 471 GHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIYAA-KLLVDKLQQNG-F 528
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y L+ G C G++E+A + EM+ G ++ Y+ I K G ++ A L
Sbjct: 529 LDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHFLCKMGLIQQAMEL 588
Query: 481 RKEM 484
+ M
Sbjct: 589 MRAM 592
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 91/187 (48%), Gaps = 8/187 (4%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P++ T+ + G +EG E ++ + + + + Y+ ++ C++ + A+
Sbjct: 458 IKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIYAAK 517
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L ++++ +N D V YNT++ GFC GE+ +A F EM G + V++ +++
Sbjct: 518 LLVDKLQ-QNGFLDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHFL 576
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG---ELCDKRRVFEALDILKARVVKFGL 419
C+ G + A+ + M +G P+ T LI E+C + V E D + + G
Sbjct: 577 CKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVEICGSKDVIELHDYMVLK----GA 632
Query: 420 FPTEKSY 426
P K+Y
Sbjct: 633 VPDRKTY 639
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N L+ GF G EK +++EM +G + SY++++ C+ +++A +L M
Sbjct: 533 TYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHFLCKMGLIQQAMELMRAM 592
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ + D++ Y T+I F EI E M L G T+ V+
Sbjct: 593 SSQGIIPDLITYTTLITNFVEICGSKDVIELHDYMVLKGAVPDRKTYRSFVS 644
>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
Group]
gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
Length = 618
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 146/323 (45%), Gaps = 22/323 (6%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA--------------- 231
++ RG+ V T N LI V +E++ ++ D
Sbjct: 164 MLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDC 223
Query: 232 -----GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
G+ ++K +RPN++T+NALM ++ + + ++ + G P+ ++
Sbjct: 224 IGDAEGLFLEMKEA-GMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFT 282
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L+ C+ R+ EA+ ++ +M V V YN++I G G A FF+E+
Sbjct: 283 TLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRK 342
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+ T +V G C G + A M + G + VLI E C + EA
Sbjct: 343 GLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEA 402
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L + R+ + G+ P +Y LI G + G+ME A+ + EMV KG EP++ Y+A I
Sbjct: 403 L-VTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIH 461
Query: 467 GYMKEGNVEMATMLRKEMFENQV 489
G+ K G+++ A L+KEM E +
Sbjct: 462 GHAKNGDMDAAFWLQKEMEEKGI 484
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 118/241 (48%), Gaps = 12/241 (4%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P V +N+L+ G +R G ++ + E+ R G PD ++ S+++ C+ +M+ A
Sbjct: 309 VAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVAT 368
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ E M+ + + AYN +I +C+ G + A M GVE + VT+ L++G+
Sbjct: 369 RFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGH 428
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G+++ A+ +Y +M KG EP T LI K +A L+ + + G++
Sbjct: 429 SKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHA-KNGDMDAAFWLQKEMEEKGIYSN 487
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKG---FEPSLE--------IYSAFIDGYMKE 471
+ L+ GLC E ++++A++ E G+ PS+ IY +IDG E
Sbjct: 488 AITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNE 547
Query: 472 G 472
Sbjct: 548 A 548
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 119/249 (47%), Gaps = 1/249 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+R P + NA++ G + +V +++ EM G P +Y+ L+ + + +
Sbjct: 132 LRELPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAK 191
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A ++W++M + ++ +VV Y T+I CE + AE F EM +G+ + T+ L++
Sbjct: 192 AWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMS 251
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
+ + ++ A++ Y D+ + G P LI LC R+ EA +I + ++ +
Sbjct: 252 SHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIF-LDMPRYEVA 310
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
PT Y LI G G +EAL E++ KG P S + G G +++AT
Sbjct: 311 PTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRF 370
Query: 481 RKEMFENQV 489
+ M ++ +
Sbjct: 371 LEVMQQSGI 379
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 11/191 (5%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V PNV T+++L+ G + G E ++ EM G EP+ +Y+ L+ + M
Sbjct: 412 VGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDA 471
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS--------S 352
A L +EM +K + + + + ++ G C + A F E SG + S S
Sbjct: 472 AFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIME--YSGQKKSEKNPSIANS 529
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ L+ G G + A ++ M G P+ T ++I LC V A+ +L A
Sbjct: 530 VTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAM-MLYA 588
Query: 413 RVVKFGLFPTE 423
+VK G+ PT+
Sbjct: 589 DMVKVGVKPTK 599
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/513 (22%), Positives = 222/513 (43%), Gaps = 76/513 (14%)
Query: 27 STSSSTPPSDQS-----HNLIATVVSLLTHHRSKSRWNHLLS--LCRSGLTPTQFSQIAL 79
S + TPPS S +NL+ ++ +L H ++W L S + + + + L
Sbjct: 11 SKAKPTPPSKPSLKPRINNLVKDILEVLHTH---NQWEENLQTRFSESEVLASDVAHLVL 67
Query: 80 GLKNNPHLALRFFSFTQHKSLCKH-SLSSYATIIHILSRARL---------------IGP 123
+ L L+FF + + +Y++++ +L+R+R+ + P
Sbjct: 68 DRIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSP 127
Query: 124 ARDVIRVALRSPEN----DPKLKLFEVLVKTYR------ECGSAPFVFDLLIK------- 166
R+ + + +++ + + L+L+ ++KTY C S + ++L+K
Sbjct: 128 TREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNS---LLNMLVKLGRIEIA 184
Query: 167 ---CCLEVKNI---EKIETCVDIVRMLMSRGLSVKVSTCNALI--------WEVSRG--- 209
C+ VK + K+E ++ +G + N LI E++ G
Sbjct: 185 RKFTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFI 244
Query: 210 ----KGVISGYEIYREVFGLDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYR 259
KG + E Y + ++ G K + R++ + NV +N ++ Y+
Sbjct: 245 ELKLKGFLPTVETYGAI--INGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYK 302
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G K + M GC+PD +Y+ L++ C + ++ EA++L E+ K + + +
Sbjct: 303 HGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFS 362
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
Y +I +C+ G RA + EM G + VT+ LV+G AG+VD A+ + M
Sbjct: 363 YTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKML 422
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+G P+ +L+ LC K ++ A +L A ++ + P Y L+ G G +
Sbjct: 423 ERGVFPDAGIYNILMSGLCKKFKL-PAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNL 481
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+EA K+ + KG P + Y+A I GY K G
Sbjct: 482 DEARKLFELTIEKGMNPGIVGYNAMIKGYCKFG 514
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ +N LM G ++ + + EM PD + Y+ L+ F + EA
Sbjct: 426 VFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEAR 485
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL+E +K + +V YN +I G+C+ G M A M + T+ +++GY
Sbjct: 486 KLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGY 545
Query: 363 CRAGDVDSAILVYNDMCRKGFEP 385
+ D+D A ++ +M + +P
Sbjct: 546 VKQHDLDGAQKMFREMVKMKCKP 568
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 406 ALDILKARVVKFGLFPTEKSYM-FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
A + L +VK G + + ++KGLC+EGK+EE K+ + G+G P++ Y+
Sbjct: 167 ACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTL 226
Query: 465 IDGYMKEGNVEMATMLRKEM 484
IDGY K+G++EMA L E+
Sbjct: 227 IDGYCKKGDMEMANGLFIEL 246
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 148/336 (44%), Gaps = 54/336 (16%)
Query: 190 RGLSVKVS-TCNALIWEVSRGKGVISGYEIYR-EVFGLDSDATAGIGKDVKRVVRVRPNV 247
RG S+ + TCN L+ + + + Y+I+R E+ G D N
Sbjct: 62 RGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDT----------------NH 105
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLG------------------------------ 277
T+N L+ GF + G E+ + EM G
Sbjct: 106 ITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE 165
Query: 278 ---CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMA 334
C PD +++L+ C+ ++ EA ++ EEM ++ + DVV YN++I G C+ M
Sbjct: 166 SVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRME 225
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
A + M V + VT+ L+ GYC+ G A + M + G P+ T LI
Sbjct: 226 EARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLI 285
Query: 395 GELCDKRRVFEALDILKARVVKFGL-FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
C K ++ +A ++L ++K GL P +Y LI GLC+ G+ EA ++ +EM G+G
Sbjct: 286 SGFCQKSKIDKACEVL--HLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRG 343
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
P + Y++ I + + +E A ++ M E V
Sbjct: 344 ILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGV 379
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 181/447 (40%), Gaps = 42/447 (9%)
Query: 42 IATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFT--QHKS 99
++ +V++LT + L+ L P ++ L + + ++L FF + H+
Sbjct: 5 VSGIVAILTSVGDRPEAEAALAKYSRNLVPNTVGRV-LQVIKDVDVSLFFFRWVTRSHRG 63
Query: 100 LCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPF 159
H+ + ++ L +AR A + R L D + L+ + + G
Sbjct: 64 ESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMER 123
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
F LL + + RG S V T ++++ + + + +
Sbjct: 124 AFQLLAE--------------------MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYF 163
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
RE V P+ FN L+ G + + + EM+ G
Sbjct: 164 RES------------------VECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIV 205
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +Y+ L+ C+ RM EA +L E M + V ++V YNT+I G+C+ G A +
Sbjct: 206 PDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQL 265
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
M SG VTF L++G+C+ +D A V + M + P T VLI LCD
Sbjct: 266 IERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCD 325
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
R EA ++L + + G+ P +Y LI C ++E+A ++Q MV +G P
Sbjct: 326 AGRANEACELL-SEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGI 384
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFE 486
Y +K + A L MF+
Sbjct: 385 SYCTLAVALLKSERFDEAFALLDNMFD 411
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 131/259 (50%), Gaps = 4/259 (1%)
Query: 222 VFGLDSDATAGIGKD-VKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
++G G+ ++R+++ P+V TFN+L+ GF ++ +K +V M + C
Sbjct: 250 IYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLC 309
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P+ +Y+VL++ C+ R EA +L EM + + D++ YN++IG FC ++ +A +
Sbjct: 310 APNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQ 369
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
M GV +++ L ++ D A + ++M G P T L+ LC
Sbjct: 370 IQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLC 429
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
RR+ EA +L A + + G P +Y L+ GLC+ G++++A +V MV +G +P +
Sbjct: 430 CSRRLDEARHLL-AVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLV 488
Query: 459 EIYSAFIDGYMKEGNVEMA 477
+ +EG ++A
Sbjct: 489 SSSGTIVHTLAREGKQDLA 507
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 4/177 (2%)
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG-VESSSVTFEHLVNGYCRAGDVDSAIL 373
H+ N ++ + +A + FR+ L +++ +T+ L+ G+C+AGD++ A
Sbjct: 67 HNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQ 126
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ +M +G P+ T ++ LC+ + A+ + V P + L+ GL
Sbjct: 127 LLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESV---ECAPDSVLFNILVHGL 183
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
C+ ++ EA ++ EM +G P + Y++ IDG K +E A L + M + +VR
Sbjct: 184 CKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVR 240
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 58/115 (50%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ TFN+LM G ++ + M R+GC+P +Y VL+ C+ R+ +A+++
Sbjct: 416 PNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEV 475
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
M + ++ V + TI+ G+ A +F ++ + ++ +++ L+
Sbjct: 476 LVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLL 530
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 59/136 (43%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ ++ L V + F++ + M G P+ ++++ LM C RR+ EA
Sbjct: 379 VIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEAR 438
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L MR + Y ++ G C+ G + A+E M G++ + +V+
Sbjct: 439 HLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTL 498
Query: 363 CRAGDVDSAILVYNDM 378
R G D A+ ++ +
Sbjct: 499 AREGKQDLALHYFDQV 514
>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 135/555 (24%), Positives = 243/555 (43%), Gaps = 89/555 (16%)
Query: 17 KPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLL------------SL 64
KP + S S++ S ++ ++I + LL+ +SK R + L+ SL
Sbjct: 21 KPSSRFFS--SSTLSLREKEEDKDIIYSKFDLLSEPKSK-RIDFLIPEYQNPEAKCVWSL 77
Query: 65 CRSGLTPTQFSQIA-LGLKN-------NPHLALRFFSFTQHKSLCKHSLSSYATIIHILS 116
S T SQ++ LG+ N N AL FF +Q S +H++ S +IHIL
Sbjct: 78 GCSTRFITDLSQVSVLGVLNDLFGESFNAAFALYFFRLSQCCSGLEHTIRSLCRLIHILV 137
Query: 117 RARLIGPARDVIRVALRS-----PENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCL-- 169
+ D+I +R+ E + LF+++ T V+ +L+ C +
Sbjct: 138 YGKRNYRVMDLILFLVRNIGGAVGEEELCDLLFKLVYDTGFGTKDLETVYSMLVDCYVTE 197
Query: 170 -----------EVK--NI-----------------EKIETCVDIVRMLMSRGLSVKVSTC 199
E+K NI +++ DI+ + S G+ + S
Sbjct: 198 SKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEGMQSFGMHLNASIL 257
Query: 200 NALIWEVSRGKGVISGYEIYREV--FGLDSDATA-GIGKDVK---RVVRVRPN-----VH 248
+ I + SG++I E+ +G+ +D A I D V+V + +H
Sbjct: 258 SLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIH 317
Query: 249 --------TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ ++++ G+ ++G +K ++ + P+ + YS M C++ M E
Sbjct: 318 CGISVDSVSVSSVIDGYCKKGRSDKAINL---LNFFNVRPNIFVYSSFMTKLCKDGNMLE 374
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A K ++EM + + D Y IIGG+C++G++ +A ++ EM G+ S T+ L+N
Sbjct: 375 ASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLIN 434
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK---RRVFEALDILKARVVKF 417
C++GD+ A + M +G P+ T LI K ++ FE LDI+++
Sbjct: 435 ACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSA---- 490
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G+ P +Y LI L G EA + E++ +G P + ++ IDG+ K+GN E A
Sbjct: 491 GMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEA 550
Query: 478 TMLRKEMFENQVRQE 492
++ M E V+ +
Sbjct: 551 FLVWSYMSERHVKPD 565
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 123/251 (49%), Gaps = 1/251 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
VRPN+ +++ M ++G + + EM+ G PDC+ Y++++ +C+ + +A
Sbjct: 351 NVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKA 410
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ EM + V Y +I C+ G+MA AE + M L G+ VTF L++G
Sbjct: 411 FQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDG 470
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ + G + A + + M G P+ T LI L + EA DIL +++ GL P
Sbjct: 471 FGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILH-ELIRRGLSP 529
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
++ +I G ++G EEA V + M + +P + SA ++GY + ++ A L
Sbjct: 530 DVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALF 589
Query: 482 KEMFENQVRQE 492
+M + ++ +
Sbjct: 590 LKMLDAGLKPD 600
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 111/229 (48%), Gaps = 1/229 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V T+ L+ + G E + M G PD +++ L+ F ++ +++A
Sbjct: 422 ITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAF 481
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L + MR + D V YN +I G A++ E+ G+ +TF +++G+
Sbjct: 482 ELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGF 541
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G+ + A LV++ M + +P+ T L+ C RR+ EA + L +++ GL P
Sbjct: 542 SKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEA-NALFLKMLDAGLKPD 600
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
Y LI G C G M A + A M+ GF P++ + AF G+ K+
Sbjct: 601 LVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHRAFALGFEKK 649
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 21/237 (8%)
Query: 155 GSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
G P V + LLI C + ++ E +++ +M GL V T N LI + +
Sbjct: 421 GITPSVTTYTLLINACCKSGDMAMAEY---LLQRMMLEGLIPDVVTFNCLIDGFGKKGYL 477
Query: 213 ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
+E+ D+ R + P+ T+NAL+ G + +D+ E
Sbjct: 478 QKAFELL----------------DIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHE 521
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
+ R G PD +++ ++ F ++ EA +W M +++V+ DVV + ++ G+C
Sbjct: 522 LIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARR 581
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
M A F +M +G++ V + +L++G+C AG++++A + M GF P +T
Sbjct: 582 MDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITT 638
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 161/319 (50%), Gaps = 14/319 (4%)
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
+T + I+ +L G + K++ ++ ++ + KGV +++ V +DS AGI ++
Sbjct: 153 DTHLKIIEIL---GRASKLNHARCILLDMPK-KGVEWDEDLF--VLLIDSYGKAGIVQES 206
Query: 238 KRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
+V + V + +++AL R G + + + M G P C++Y++++
Sbjct: 207 VKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWG 266
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
F ++ A + +EEM+++ + DVV YNT+I G+ I +M AE+FF EM +E +
Sbjct: 267 FFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPT 326
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+++ ++ GY G VD + ++ +M G +P T L+ LCD ++ EA +++K
Sbjct: 327 VISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVK 386
Query: 412 ARVVKFGLFPTEKS-YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
V ++ + P + S +M LI C+ G+++ A V M+ Y I+ + K
Sbjct: 387 EMVERY-IAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCK 445
Query: 471 EGNVEMATMLRKEMFENQV 489
G + A L ++ E ++
Sbjct: 446 SGVYDRAVKLLDKLIEKEI 464
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/468 (22%), Positives = 187/468 (39%), Gaps = 81/468 (17%)
Query: 80 GLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDP 139
G +N+ H AL+FF + + L +H ++ II IL RA + AR ++ L P+
Sbjct: 128 GSRNSDH-ALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCIL---LDMPKKGV 183
Query: 140 KLK--LFEVLVKTYRECG---SAPFVFDLLIKCCLEVKNIEKIETCVDIV----RMLMSR 190
+ LF +L+ +Y + G + VF + + +E + I+ + ++ R +M++
Sbjct: 184 EWDEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVE-RTIKSYDALFKVILRRGRYMMAK 242
Query: 191 ---------GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
G+ T N +IW V + + E+ +
Sbjct: 243 RYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEM----------------KER 286
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ P+V T+N ++ G+YR E+ E +VEM EP SY+ ++ + R+ +
Sbjct: 287 RISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDG 346
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE-SSSVTFEHLVN 360
+L+EEM+ ++ + V Y+T++ G C+ +M A+ +EM + + F L+
Sbjct: 347 LRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLIT 406
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
C+AG +D+A V M R E VLI C A+ +L + K +
Sbjct: 407 CQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIIL 466
Query: 421 PTEKS-----------------------------------------YMFLIKGLCEEGKM 439
+ S + LI+G +EG
Sbjct: 467 RPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPIAFNNLIRGHSKEGAP 526
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
E A ++ M + + Y I+ ++K+G A M EN
Sbjct: 527 ESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIEN 574
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 10/227 (4%)
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE----ERRMREAEKLWEE---MRDK 311
+ G + DV M RL + Y VL+ FC+ +R ++ +KL E+ +R +
Sbjct: 410 KAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQ 469
Query: 312 N-VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
N +E + YN II C G+ ++AE FR++ GV+ + F +L+ G+ + G +S
Sbjct: 470 NSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQ-DPIAFNNLIRGHSKEGAPES 528
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A + M R+ E +LI K +A L +++ G P + ++
Sbjct: 529 AFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDG-MIENGHIPDSSLFRSVM 587
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ L E+G+++ A +V MV KG + ++++ + ++ + G+VE A
Sbjct: 588 ESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEA 634
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 145/336 (43%), Gaps = 32/336 (9%)
Query: 170 EVKNIEKIETCVDIVRMLMSRGLSVKVSTC---------NALIWEVSRGKGVISGYEIYR 220
+++N EKIE I RM+ +R + ++ ++L+W V G
Sbjct: 82 KLRNPEKIEDI--ICRMMANRAWTTRLQNSIRSLVPQFDHSLVWNVLHG----------- 128
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
+SD + V+R R + T ++ R + ++M + G E
Sbjct: 129 ---SRNSDHALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCILLDMPKKGVEW 185
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D + +L+ + + ++E+ K++++M++ VE + +Y+ + G A+ +F
Sbjct: 186 DEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYF 245
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
M GV + T+ ++ G+ + V++A + +M + P+ T +I
Sbjct: 246 NAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRI 305
Query: 401 RRVFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+++ EA +K R ++ PT SY +IKG G++++ L++ EM G +P+
Sbjct: 306 KKMEEAEKFFVEMKGRNIE----PTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPN 361
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
YS + G + A + KEM E + +D
Sbjct: 362 AVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKD 397
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 12/238 (5%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
FN L+ G +EGA E ++ M R + +Y +L+ F ++ +A+ + M
Sbjct: 512 AFNNLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGM 571
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ D + +++ E G + A M GV+ + ++ G V
Sbjct: 572 IENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHV 631
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL----FPTEK 424
+ A+ + + G EP+ + L+ LC K + AL +L FGL +
Sbjct: 632 EEALGRIDLLMNNGCEPD---FDGLLSVLCAKGKTIAALKLL-----DFGLERDYNISFS 683
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY ++ L GK A + +++ KG I +EGN + A +L +
Sbjct: 684 SYENVLDALLTAGKTLNAYSILCKIMQKGGATDWSSCKDLIRSLNEEGNTKQADILSR 741
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 92/223 (41%), Gaps = 5/223 (2%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N ++ G K E ++ ++ + G + D +++ L+ +E A ++ + M
Sbjct: 479 YNLIIEYLCNSGQTSKAETLFRQLMKKGVQ-DPIAFNNLIRGHSKEGAPESAFEILKIMG 537
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ V + AY +I F + GE A A+ M +G S F ++ G +
Sbjct: 538 RREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQ 597
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+A V N+M KG + + ++ L + V EAL R+ E + L
Sbjct: 598 TASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEAL----GRIDLLMNNGCEPDFDGL 653
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ LC +GK ALK+ + + + S Y +D + G
Sbjct: 654 LSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAG 696
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 126/255 (49%), Gaps = 8/255 (3%)
Query: 231 AGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE-MARLGCEPDCYSYSVLM 289
A +G VK+ RV + TF L+ G + D+ + M LGC PD +SY+ L+
Sbjct: 113 AALGNVVKKGFRV--DAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLL 170
Query: 290 AVFCEERRMREAEKLWEEMRDK---NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
C+E R +EA +L M D DVV+YNT++ GF + G+ +A + EM
Sbjct: 171 KGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDR 230
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+ VT+ ++ C+A +D A+ V N M + G P+ T ++ C + EA
Sbjct: 231 GILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 290
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ LK ++ G+ P +Y L+ LC+ G+ EA K+ M +G EP + Y +
Sbjct: 291 IGTLK-KMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQ 349
Query: 467 GYMKEGN-VEMATML 480
GY +G VEM +L
Sbjct: 350 GYATKGALVEMHALL 364
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 126/242 (52%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V ++N ++ GF++EG +K + EM G PD +YS ++A C+ + M +A ++
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEV 258
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M V D + YN+I+ G+C G+ A ++M GVE + VT+ L+N C+
Sbjct: 259 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G A +++ M ++G EP+ +T L+ K + E +L +V+ G+ P
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDL-MVRNGIQPDHH 377
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ LI ++ K+++A+ V ++M G P++ Y ID K G+V+ A + ++M
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 437
Query: 485 FE 486
+
Sbjct: 438 ID 439
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 125/247 (50%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+ L+ G+ +GA ++ + M R G +PD + +++L+ + ++ ++ +A
Sbjct: 337 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 396
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ +MR + +VV Y T+I C+ G + A +F +M G+ + + + L++G
Sbjct: 397 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C D A + +M +G +I C + RV E+ + +V+ G+ P
Sbjct: 457 CTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL-MVRIGVKPD 515
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI G C GKM+EA K+ A MV G +P + Y I+GY + ++ A L K
Sbjct: 516 IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFK 575
Query: 483 EMFENQV 489
EM + V
Sbjct: 576 EMVSSGV 582
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 124/247 (50%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V T+++++ + A +K +V M + G PDC +Y+ ++ +C + +EA
Sbjct: 232 ILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 291
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++MR VE +VV Y++++ C+ G A + F M G+E T+ L+ GY
Sbjct: 292 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGY 351
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G + + + M R G +P+ +LI + +V +A+ ++ +++ + GL P
Sbjct: 352 ATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM-LVFSKMRQHGLNPN 410
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y +I LC+ G +++A+ +M+ +G P++ +Y++ I G + A L
Sbjct: 411 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELIL 470
Query: 483 EMFENQV 489
EM + +
Sbjct: 471 EMLDRGI 477
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 169/388 (43%), Gaps = 26/388 (6%)
Query: 100 LCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP- 158
LCK+ S+ A I R + P R L+ L L+ G P
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPD 375
Query: 159 -FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
VF++LI C K EK++ + + + GL+ V C + +V G +
Sbjct: 376 HHVFNILI--CAYAKQ-EKVDQAMLVFSKMRQHGLNPNV-VCYGTVIDVLCKSGSVDDAM 431
Query: 218 IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
+Y E +D T PN+ + +L+ G ++K E++ +EM G
Sbjct: 432 LYFEQM-IDEGLT--------------PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
+ ++ ++ C+E R+ E+EKL++ M V+ D++ YNT+I G C G+M A
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+ M GV+ VT+ L+NGYCR +D A+ ++ +M G P T +++ L
Sbjct: 537 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
RR A + L + K G +Y ++ GLC+ +EAL++ + +
Sbjct: 597 FHTRRTAAAKE-LYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE 655
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMF 485
++ I +K G ++ A K++F
Sbjct: 656 TRTFNIMIGALLKCGRMDEA----KDLF 679
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 116/242 (47%), Gaps = 1/242 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ + V+P++ T+N L+ G G ++ + M +G +PD +Y L+ +C
Sbjct: 505 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRV 564
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
RM +A L++EM V +++ YN I+ G A A+E + + SG + T+
Sbjct: 565 SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTY 624
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++G C+ D A+ ++ ++C + E T ++IG L R+ EA D+ A
Sbjct: 625 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA 684
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
GL P ++Y + + L E+G +EE + M G + ++ + ++ G++
Sbjct: 685 N-GLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDIT 743
Query: 476 MA 477
A
Sbjct: 744 RA 745
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 36/285 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ T+N+++ G+ G ++ +M G EP+ +YS LM C+ R EA
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+++ M + +E D+ Y T++ G+ G + M +G++ F L+ Y
Sbjct: 327 KIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 386
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ VD A+LV++ M + G P +I LC V +A+ + +++ GL P
Sbjct: 387 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM-LYFEQMIDEGLTPN 445
Query: 423 EKSYMFLIKGLC-----------------------------------EEGKMEEALKVQA 447
Y LI GLC +EG++ E+ K+
Sbjct: 446 IIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 505
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
MV G +P + Y+ IDG G ++ AT L M V+ +
Sbjct: 506 LMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 550
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 10/175 (5%)
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
VA ++ MARA G V + T+ L+ CRAG +D +
Sbjct: 65 VARHSPAAAVSRYNRMARA-------GAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGN 117
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
+ +KGF + T L+ LC +R +A+DI+ R+ + G P SY L+KGLC+E
Sbjct: 118 VVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDEN 177
Query: 438 KMEEALKV---QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ +EAL++ A+ G G P + Y+ ++G+ KEG+ + A EM + +
Sbjct: 178 RSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGI 232
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P V T+ +L+ G G +++ + EM PD ++SVL+ + C+E + EA
Sbjct: 262 ILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEAR 321
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + M + VE DV YNT++ G+C E+ A + F M G +F LVNGY
Sbjct: 322 VILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGY 381
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A +D A ++++M +G P+ + LI LC RR EA ++ K + G P
Sbjct: 382 CKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFK-DMHSNGYPPN 440
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ L ++G +++A+ + M G +P L Y+ IDG K G + A L
Sbjct: 441 LVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFA 500
Query: 483 EM 484
E+
Sbjct: 501 EL 502
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 131/285 (45%), Gaps = 37/285 (12%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER------- 296
+PNVH+++ ++ G R G +V + M +GCEPD Y+ ++ C++R
Sbjct: 193 KPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVH 252
Query: 297 ----------------------------RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
R +EA L EM+ N+ D+VA++ +I C
Sbjct: 253 IFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMC 312
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ GE++ A + M GVE T+ L+NGYC +V A V+ M KG P+
Sbjct: 313 KEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVF 372
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
+ +L+ C +R+ EA + + GL P SY LI GLC+ + EA ++ +
Sbjct: 373 SFSILVNGYCKAKRIDEAKQLFD-EMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
M G+ P+L YS +D K+G ++ A L + M EN + D
Sbjct: 432 MHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAM-ENSGLKPD 475
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 126/252 (50%), Gaps = 3/252 (1%)
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+GK +K + + PNV TF+ L+ GF EG + +++ M G +P+ +SYS+++
Sbjct: 149 LGKIIK--LGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGL 206
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C + E KL E M+ E DVV YNTI+ C+ + A F +M +G+ +
Sbjct: 207 CRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTV 266
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ L++G G A + N+M P+ VLI +C + V EA ILK
Sbjct: 267 VTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKT 326
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ + G+ P +Y L+ G C ++ EA KV M+ KG P + +S ++GY K
Sbjct: 327 -MTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAK 385
Query: 473 NVEMATMLRKEM 484
++ A L EM
Sbjct: 386 RIDEAKQLFDEM 397
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 111/207 (53%), Gaps = 1/207 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+N LM G+ + V+ M G PD +S+S+L+ +C+ +R+ EA+
Sbjct: 332 VEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAK 391
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L++EM + + D V+YNT+I G C+ AEE F++M +G + VT+ L++
Sbjct: 392 QLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCL 451
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G +D A+ ++ M G +P+ T ++I +C + +A ++ VK GL P
Sbjct: 452 SKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVK-GLQPN 510
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEM 449
I G+C+ G ++EA K +M
Sbjct: 511 NWVCTPTIDGVCKGGLLDEAHKAFRQM 537
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 1/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ F L R ++ V + +M G D S ++L+ FC + +
Sbjct: 89 PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSV 148
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ +E +V+ ++T+I GFC G++ RA E F M G + + ++ ++ G CR
Sbjct: 149 LGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCR 208
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G I + M G EP+ ++ LC R V EA+ I ++ G+ PT
Sbjct: 209 VGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIF-CKMKGTGILPTVV 267
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI GL G+ +EA + EM G P L +S ID KEG V A ++ K M
Sbjct: 268 TYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM 327
Query: 485 FENQVRQE 492
E V +
Sbjct: 328 TEMGVEPD 335
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 1/176 (0%)
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R + +A + M + N +V + + + ++M ++G+ ++
Sbjct: 70 RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L+N +CR VD V + + G EP T LI C + ++ A+++ V
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ G P SY +IKGLC GK E +K+ M G EP + IY+ +D K+
Sbjct: 190 R-GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKD 244
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 35/182 (19%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V +F+ L+ G+ + ++ + ++ EM G PD SY+ L++ C+ RR EAE+L
Sbjct: 369 PDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEEL 428
Query: 305 WEEMR-----------------------------------DKNVEHDVVAYNTIIGGFCE 329
+++M + ++ D+V YN +I G C+
Sbjct: 429 FKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCK 488
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G+ A E F E+ + G++ ++ ++G C+ G +D A + M + P
Sbjct: 489 YGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGC 548
Query: 390 IE 391
I
Sbjct: 549 IN 550
>gi|297724885|ref|NP_001174806.1| Os06g0499301 [Oryza sativa Japonica Group]
gi|52076487|dbj|BAD45366.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|125597333|gb|EAZ37113.1| hypothetical protein OsJ_21452 [Oryza sativa Japonica Group]
gi|255677074|dbj|BAH93534.1| Os06g0499301 [Oryza sativa Japonica Group]
Length = 642
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 138/286 (48%), Gaps = 12/286 (4%)
Query: 210 KGVISGYEIYRE-VFGLDSDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFEK 265
KG + Y V GL AG V R + V P V T+ A++ G R G +
Sbjct: 272 KGCVPTTATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCG---R 328
Query: 266 VEDVWV---EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
V+D W EM R G + + YS ++ FC+ + A K+WE M V +VV Y+
Sbjct: 329 VKDAWKVAEEMERNGLAWNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSA 388
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+IGG G+M AE FREM S + +T+ ++ GY + GD A+ V+ +M G
Sbjct: 389 MIGGLANFGKMTEAELLFREMIHSKCAPNIITYGSIIQGYFKIGDTSRALSVWEEMIGAG 448
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
P + +LI LC+ R+ +A+ + K ++ G P +Y +IKGLC G ++
Sbjct: 449 CVPNAVSYSILINGLCNVGRLKDAMMVWK-HMLDRGCAPDTIAYTSMIKGLCVSGMVDGG 507
Query: 443 LKVQAEMVGKGF-EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
L++ +M+ G +P + Y+ +DG + ++ A L M +
Sbjct: 508 LRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQ 553
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 137/328 (41%), Gaps = 17/328 (5%)
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI--WEVSRGKGVISGYEI 218
F+LL+KC C +V R L V + + +I W+++ K S
Sbjct: 169 FNLLLKC-----------VCSSLVPRDPGRYLDVALRILHEIIPGWDLAPDKFTYSTVVS 217
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
G DA A + + V V FN ++ R G + ++ M GC
Sbjct: 218 ALADAGRVDDAVALVHEMVADGVVA---AEAFNPVLRAMLRAGDVKGAAKLFGFMQLKGC 274
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P +Y+VL+ R A + M + V V+ Y ++ G G + A +
Sbjct: 275 VPTTATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWK 334
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
EM +G+ + + ++ G+C++G++D A+ V+ M P +IG L
Sbjct: 335 VAEEMERNGLAWNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLA 394
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ ++ EA ++L ++ P +Y +I+G + G AL V EM+G G P+
Sbjct: 395 NFGKMTEA-ELLFREMIHSKCAPNIITYGSIIQGYFKIGDTSRALSVWEEMIGAGCVPNA 453
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFE 486
YS I+G G ++ A M+ K M +
Sbjct: 454 VSYSILINGLCNVGRLKDAMMVWKHMLD 481
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 2/209 (0%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD ++YS +++ + R+ +A L EM V A+N ++ G++ A +
Sbjct: 207 PDKFTYSTVVSALADAGRVDDAVALVHEMVADGVVA-AEAFNPVLRAMLRAGDVKGAAKL 265
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F M L G ++ T+ LV+G G +A+ V M R+G P T ++ L
Sbjct: 266 FGFMQLKGCVPTTATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVR 325
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
RV +A + + + + GL E Y +I G C+ G+++ ALKV MV P++
Sbjct: 326 CGRVKDAWKVAE-EMERNGLAWNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVV 384
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+YSA I G G + A +L +EM ++
Sbjct: 385 LYSAMIGGLANFGKMTEAELLFREMIHSK 413
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 10/221 (4%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEK--------LWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
P S+++L+ C R+ + L E + ++ D Y+T++ + G
Sbjct: 164 PTLLSFNLLLKCVCSSLVPRDPGRYLDVALRILHEIIPGWDLAPDKFTYSTVVSALADAG 223
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A EM GV ++ F ++ RAGDV A ++ M KG P +T
Sbjct: 224 RVDDAVALVHEMVADGVVAAE-AFNPVLRAMLRAGDVKGAAKLFGFMQLKGCVPTTATYN 282
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
VL+ L R A+ +++ R+ + G+ P +Y ++ GL G++++A KV EM
Sbjct: 283 VLVHGLLVCGRAGAAMGVMR-RMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMER 341
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
G + +YS I G+ K G ++ A + + M + VR
Sbjct: 342 NGLAWNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPN 382
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 157/405 (38%), Gaps = 91/405 (22%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
A + F F Q K C + ++Y ++H L G A V+R R E +
Sbjct: 262 AAKLFGFMQLKG-CVPTTATYNVLVHGLLVCGRAGAAMGVMRRMER-----------EGV 309
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST--------- 198
V G+ V D L++C VK+ K+ ++ + + + V T
Sbjct: 310 VPGVMTYGA---VVDGLVRCG-RVKDAWKVAEEMERNGLAWNEFVYSTVITGFCKSGEID 365
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVR--------PNVHTF 250
C +WE V +Y + G A GK + + R PN+ T+
Sbjct: 366 CALKVWEAMVASPVRPNVVLYSAMIG----GLANFGKMTEAELLFREMIHSKCAPNIITY 421
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
+++ G+++ G + VW EM GC P+ SYS+L+ C R+++A +W+ M D
Sbjct: 422 GSIIQGYFKIGDTSRALSVWEEMIGAGCVPNAVSYSILINGLCNVGRLKDAMMVWKHMLD 481
Query: 311 K------------------------------------NVEHDVVAYNTIIGGFCEIGEMA 334
+ + + DV++YN ++ G ++
Sbjct: 482 RGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLP 541
Query: 335 RAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
RA + M G + +VT + + AG+ RKG E +E L+
Sbjct: 542 RAMDLLNRMLDQGCDPDTVTCNIFLREF-GAGE------------RKGRE----FLEGLV 584
Query: 395 GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
LCD+RR A ++L + K+ + P + +++ +C ++
Sbjct: 585 VRLCDRRRNMAAGEVLMVMLAKY-IVPEAPIWEMVVRDVCRRKRV 628
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 117/220 (53%), Gaps = 1/220 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV T+N+L+ GF G + ++ M GC PD +Y+ L+ FC+ +R+ +
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL+ EM + + D YNT+I G+C+ G++ A++ F M GV VT+ L++
Sbjct: 345 KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 404
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G ++ A+++ D+ + + + T ++I LC ++ EA + ++ K G+ P
Sbjct: 405 CNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK-GVKPD 463
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+Y+ +I GLC +G EA K+ M GF PS IY
Sbjct: 464 AIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 135/261 (51%), Gaps = 3/261 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
+DA + VKR ++ PNV F AL+ F +EG + +++ EM R P+ ++Y+
Sbjct: 236 TDAARLLRDMVKR--KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYN 293
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L+ FC + +A+ +++ M K DVV YNT+I GFC+ + + F EM
Sbjct: 294 SLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 353
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+ + T+ L++GYC+AG ++ A V+N M G P+ T +L+ LC+ ++ +A
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L ++ + K + +Y +I+GLC K++EA + + KG +P Y I
Sbjct: 414 L-VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Query: 467 GYMKEGNVEMATMLRKEMFEN 487
G ++G A L + M E+
Sbjct: 473 GLCRKGLQREADKLCRRMKED 493
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 112/240 (46%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV +N ++ G + +V+ M + G D +Y+ L++ R +A +L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M + ++ +V+ + +I F + G + A ++EM V + T+ L+NG+C
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A +++ M KG P+ T LI C +RV + + + + GL
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF-CEMTYQGLVGDAF 360
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C+ GK+ A KV MV G P + Y+ +D G +E A ++ +++
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 119/250 (47%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+R + T+N L+ G G + + +M + +P+ ++ L+ F +E + EA
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++EM ++V +V YN++I GFC G + A+ F M G VT+ L+ G+
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++ V+ + ++ +M +G + T LI C ++ A + R+V G+ P
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN-RMVDCGVSPD 393
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ LC GK+E+AL + ++ + + Y+ I G + ++ A L +
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 453
Query: 483 EMFENQVRQE 492
+ V+ +
Sbjct: 454 SLTRKGVKPD 463
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 1/227 (0%)
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
F+ ++ EM + P ++ ++ V + + L+ +M + + HD+ ++
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I FC ++ A +M G S VT L+NG+C+ A+ + + M G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
F P +I LC R + AL++ + K G+ +Y LI GL G+ +A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYC-MEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ +MV + +P++ ++A ID ++KEGN+ A L KEM V
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 36/275 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV------------- 291
P++ F ++ + F+ V ++ +M LG D YS+++L+
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 292 ----------------------FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
FC+ R +EA L + M +VV YNT+I G C+
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
++ A E F M G+ + +VT+ L++G +G A + DM ++ +P
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
LI + + EA ++ K +++ + P +Y LI G C G + +A + M
Sbjct: 257 FTALIDTFVKEGNLLEARNLYK-EMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
V KG P + Y+ I G+ K VE L EM
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 161/370 (43%), Gaps = 47/370 (12%)
Query: 42 IATVVSLLTHHRSKSRWNHLLSLCRS----GLTPTQ--FSQIALGLKNNPHL--ALRFFS 93
I T+ SLL +R+ +SL S G P ++ + GL N L AL F
Sbjct: 149 IVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 208
Query: 94 FTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRE 153
+ K + + +Y T+I LS + A ++R ++ + DP + F L+ T+ +
Sbjct: 209 CMEKKGI-RADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIFFTALIDTFVK 266
Query: 154 CGS---APFVFDLLIKCCLEVKNIEKIETCVD-------------IVRMLMSRGLSVKVS 197
G+ A ++ +I+ + V N+ + ++ + +++S+G V
Sbjct: 267 EGNLLEARNLYKEMIRRSV-VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 198 TCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
T N LI + K V G +++ E+ GL DA T+N L+
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA------------------FTYNTLIH 367
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G+ + G + V+ M G PD +Y++L+ C ++ +A + E+++ ++
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
D++ YN II G C ++ A FR + GV+ ++ + +++G CR G A +
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 487
Query: 376 NDMCRKGFEP 385
M GF P
Sbjct: 488 RRMKEDGFMP 497
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 131/555 (23%), Positives = 228/555 (41%), Gaps = 97/555 (17%)
Query: 18 PKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQI 77
PKP TSS P + L+ + ++ ++++ W L + R T T+ S+I
Sbjct: 15 PKP-------TSSCIPSTPHLKYLVKDTIRII---KTETLWQEALEI-RFSETDTRVSEI 63
Query: 78 A---LGLKNNPHLALRFFSFTQHKSLCKHSLSSY--ATIIHILSRARLIGPARDVIRVAL 132
A ++P L L FF + +S +SL + ++++ +L+R R+ +++ +
Sbjct: 64 AHFVFDQIHDPRLGLNFFEWASKQSTLSNSLDGFVCSSLLKLLARFRVFKEIENLLE-TM 122
Query: 133 RSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKN-IEKIETCVDIVRMLMSRG 191
+S E P + ++ Y G +L ++V N + + C ++ +L+ G
Sbjct: 123 KSKELIPTCEALSFVISAYAGSGLVKEALELY-NTVIDVHNCVPDVFACNSLLNLLVHHG 181
Query: 192 LSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK---------------- 235
KV + E+ G + Y + GL + G+
Sbjct: 182 ---KVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIV 238
Query: 236 -------------DVKRV------VRVR---PNVHTFNALMVGFYREGAFEKVEDVWVEM 273
D++R ++V+ P V T+ A++ F ++G FE V+ + VEM
Sbjct: 239 FYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEM 298
Query: 274 -----------------ARL------------------GCEPDCYSYSVLMAVFCEERRM 298
AR GCEPD +Y+ L+ C + ++
Sbjct: 299 KERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKV 358
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
REAE+L E + + + +Y +I F + GE RA E EM G + + L
Sbjct: 359 REAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGAL 418
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
V+G AG+VD A+ V + M +G P+ + VL+ LC K R F A L ++
Sbjct: 419 VHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGR-FPAAKQLLVEMLDQN 477
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ P L+ G G ++EA K+ + +G + S+ +A I GY K G + A
Sbjct: 478 VTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDAL 537
Query: 479 MLRKEMFENQVRQED 493
+ K MF N V D
Sbjct: 538 LCFKRMF-NGVHSPD 551
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 114/246 (46%), Gaps = 1/246 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+ AL+ G G + V +M G PD Y+VLM+ C++ R A++L EM
Sbjct: 414 AYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEM 473
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
D+NV D T++ GF G + A++ F+ G+++S V ++ GYC+ G +
Sbjct: 474 LDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMM 533
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A+L + M P+ T +I + + AL + ++K P ++
Sbjct: 534 NDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMF-GLMLKKTCKPNVVTFTS 592
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI G C G + A KV EM GFEP++ Y+ I + KEG + A ++M N+
Sbjct: 593 LINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINK 652
Query: 489 VRQEDG 494
D
Sbjct: 653 CIPNDA 658
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 148/319 (46%), Gaps = 36/319 (11%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+ ++ + RG+ V CNA+I GY Y G+ +DA + V
Sbjct: 504 LFQLTIERGIDTSVVECNAMI----------KGYCKY----GMMNDALLCFKRMFNGVHS 549
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
P+ T++ ++ G+ ++ ++ M + C+P+ +++ L+ FC + AE
Sbjct: 550 --PDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAE 607
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++EEMR E +VV Y +IG FC+ G++ +A FF +M ++ + TF +LVNG
Sbjct: 608 KVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGL 667
Query: 363 CRAGDV-----------DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+ + + + M G++ + ++ LC + V AL L
Sbjct: 668 TNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQ-LH 726
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF-EPSLEI---YSAFIDG 467
+++ G P S++ L+ GLC EG++++ V + F E L+I YS +D
Sbjct: 727 DKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNV----IPCNFNERQLQIAVKYSEKLDQ 782
Query: 468 YMKEGNVEMATMLRKEMFE 486
++ EG A++L + + E
Sbjct: 783 FLSEGLTSDASLLLQTLVE 801
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 113/237 (47%), Gaps = 3/237 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ + +N LM G ++G F + + VEM PD + + L+ F + EA+
Sbjct: 443 ILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAK 502
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES-SSVTFEHLVNG 361
KL++ ++ ++ VV N +I G+C+ G M A F+ M +GV S T+ +++G
Sbjct: 503 KLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRM-FNGVHSPDEFTYSTIIDG 561
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
Y + D+ A+ ++ M +K +P T LI C + A + + + FG P
Sbjct: 562 YVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFE-EMRSFGFEP 620
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+Y LI C+EGK+ +A +M+ P+ ++ ++G + +++
Sbjct: 621 NVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISS 677
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 191/430 (44%), Gaps = 43/430 (10%)
Query: 63 SLCRSGL--TPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARL 120
SL SG+ +P + +N LA +FF + + HS+ +Y T+I L++ R
Sbjct: 33 SLSESGIRVSPIVVENVLKRFENAGMLAYQFFEWAGKQRNYTHSIRAYHTMIESLAKIRQ 92
Query: 121 IGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETC 180
D++ +RS + ++ F ++++ Y +K++
Sbjct: 93 YQIMWDLVN-KMRSLK-ILNVETFCIIMRKYARS--------------------QKVKEA 130
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
V ++ + ++ N+L+ + + K V+ EI+ + KD
Sbjct: 131 VYTFNIMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGM------------KD---- 174
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ P+ T++ L+ G+ + K +++ EM +GC+PD +Y +++ + C+ R+ E
Sbjct: 175 -QFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDE 233
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A + +EM + Y+ ++ + + A F +M + +E+ + L+
Sbjct: 234 AVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIG 293
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
+C+ + +A V N+M KG P T +++ L EA + + R++K
Sbjct: 294 AFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFR-RMIKV-CD 351
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y +IK CE K+E ALKV M K F PS+ +S I+G K+GN A +L
Sbjct: 352 PDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACIL 411
Query: 481 RKEMFENQVR 490
+EM E +R
Sbjct: 412 LEEMIEKGIR 421
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 92/209 (44%), Gaps = 37/209 (17%)
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
++ ++M + ++++EA + M +V ++ A+N+++ C+ + +A+E F M
Sbjct: 113 TFCIIMRKYARSQKVKEAVYTFNIMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGM 172
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
+ S T+ L+ G+ +A ++ A ++ +M G +P+
Sbjct: 173 KDQFIPDSK-TYSILLEGWGKAPNLPKAREIFREMVDMGCDPD----------------- 214
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
+V +G+ ++ LC+ G+++EA+ + EM +P+ IYS
Sbjct: 215 ----------IVTYGI---------MVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSV 255
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ Y E +E A +M N++ +
Sbjct: 256 LVHTYGIENRIEDAVYTFLDMERNEIEAD 284
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 181/436 (41%), Gaps = 46/436 (10%)
Query: 72 TQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVA 131
T FS+ AL L LR F+ H + ++Y +I L R R
Sbjct: 101 THFSRYALT-----PLMLRLFAHMYHHGPPAPTGATYNALIRALCR-----------RAD 144
Query: 132 LRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMS 189
LR + + ++V++ G P F F+ LI L ++++ D+ +
Sbjct: 145 LRHAQ-----RYLSLMVRS----GWRPDAFTFNSLI---LGYCRTQQLDVAQDLFDKMPL 192
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK---DVKR------- 239
RG S + ALI V E++RE+ D A + K D +R
Sbjct: 193 RGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYM 252
Query: 240 -----VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+ RP + AL+ + RE E+ E + EM G P + + ++ +C
Sbjct: 253 LQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCR 312
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
E RM A +++E M+ K E +V YN ++ GFC +G++ +A +M GVE VT
Sbjct: 313 EGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVT 372
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ G C G ++SA + M G + T VLI LC +V EA +
Sbjct: 373 YNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLE 432
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ G+ P ++ +I GLC+ GK + A +MV G P YS FI+ K
Sbjct: 433 YR-GIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGS 491
Query: 475 EMATMLRKEMFENQVR 490
EM + V+
Sbjct: 492 REGLSFIDEMLQKDVK 507
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P T A++ + REG V+ M GCEP+ ++Y+ ++ FC ++ +A L
Sbjct: 298 PCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMAL 357
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++MR+ VE DVV YN +I G C G + A R M +G+ + T+ L++ C+
Sbjct: 358 LDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCK 417
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G VD A +++ + +G P T +I LC + A L+ ++V G P
Sbjct: 418 TGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLE-KMVSAGCAPDTY 476
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y I+ LC+ E L EM+ K +PS Y+ ID KE N +AT + +M
Sbjct: 477 TYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQM 536
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 159/435 (36%), Gaps = 126/435 (28%)
Query: 146 VLVKTYRECGSAPFV--FDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
L+ RECG P V ++LLI+ C++ IE+ ++R++ GL+ T N L
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIRGQCID----GHIESAFRLLRLMEGNGLAADQYTYNVL 411
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
I + + V ++ GL+ +RPN TFN ++ G + G
Sbjct: 412 IDALCKTGKVDEACSLFD---GLEYRG-------------IRPNSVTFNTVINGLCKGGK 455
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE---------------------- 300
F+ +M GC PD Y+YS + C+ + RE
Sbjct: 456 FDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTI 515
Query: 301 -------------AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
A ++W +M DVV Y T + +C G + AE EM G
Sbjct: 516 VIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGG 575
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG------------ 395
+ ++ + L++G+ G D A+ + M P T +L+
Sbjct: 576 IIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVP 635
Query: 396 ----------ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE---- 441
EL D VFE +++K V + ++Y+ +++G EE +++E
Sbjct: 636 LKTTSVWKTIELAD---VFELFELMKKNSVP----SSARAYLAILEGFSEERRLDEVTSL 688
Query: 442 -------------------------------ALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
A + M+G GF P+L Y + G+
Sbjct: 689 VSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTA 748
Query: 471 EGNVEMATMLRKEMF 485
EG + A KE+F
Sbjct: 749 EGQADRA----KEIF 759
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 130/352 (36%), Gaps = 68/352 (19%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K + + ++S G + T + I + + KG G E+ + K
Sbjct: 455 KFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEM----------LQK 504
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
DVK P+ + ++ ++E + +W +M LGC PD +Y+ + +C E
Sbjct: 505 DVK------PSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNE 558
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG------------------------ 331
R+ EAE + EM+ + D +AYNT+I G IG
Sbjct: 559 GRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTF 618
Query: 332 ---------------------------EMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+A E F M + V SS+ + ++ G+
Sbjct: 619 FILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSE 678
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+D + + M L+ C R +A +L ++ G P
Sbjct: 679 ERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALL-CSMIGHGFLPNLI 737
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
SY +L+ G EG+ + A ++ + K + ++ IDG +++G+ +M
Sbjct: 738 SYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDM 789
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 123/246 (50%), Gaps = 1/246 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNVHT+ ++ G+ REG + E + V M G +P+ +Y+ L+ C+ A +
Sbjct: 211 KPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFE 270
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +M+ + ++ YN +I GFC+ G++ A + R G++ +T+ L+ +C
Sbjct: 271 LMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHC 330
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G + A+ +++ M G P+ LI C +R++ E+ + + GL PT+
Sbjct: 331 KQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFD-KCLMIGLLPTK 389
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++Y +I G C+ G+ AL+V MV G Y A I G KE +E A L +
Sbjct: 390 QTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEG 449
Query: 484 MFENQV 489
M + ++
Sbjct: 450 MLDKRL 455
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 20/298 (6%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY-REVFGLDSDATAGIGKDVKRV 240
D+V + S GL + V T N W + G+ +G +Y R+VF D AG
Sbjct: 24 DMVLEMRSHGLPLCVETAN---WVLR--VGLETGSFVYARKVF--DGMTRAG-------- 68
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V P F AL+V REG E+V+ + M R G D + +V++ CE+ R ++
Sbjct: 69 --VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKD 126
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ + M + +VV Y I G C+ + +A EM G++ + T L++
Sbjct: 127 VSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLID 186
Query: 361 GYCRAGDVDSAILVYNDMCR-KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
G C+ G + A ++ + + ++P T V+IG C + ++ A ++L R+V+ GL
Sbjct: 187 GLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARA-EMLLVRMVEQGL 245
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P +Y LI G C+ G + A ++ +M +GF P++ Y+A IDG+ K+G ++ A
Sbjct: 246 KPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEA 303
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 163/359 (45%), Gaps = 35/359 (9%)
Query: 124 ARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPF---VFDLLIKCCLEVKNIEKIETC 180
A V+RV L + K+F+ + + G +P L++ CC E K +E+++
Sbjct: 41 ANWVLRVGLETGSFVYARKVFDGMTRA----GVSPMNRGFGALVVVCCREGK-VEEVDA- 94
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
++ + G S+ +TC ++ + E +R + +
Sbjct: 95 --LLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTP------------ 140
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE----ER 296
PNV + A + G + ++ V EM G +P+ Y+++ L+ C+ ER
Sbjct: 141 ----PNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTER 196
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
R KL ++ + + +V Y +IGG+C G++ARAE M G++ ++ T+
Sbjct: 197 AFRLFLKL---IKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYT 253
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L+ G+C+ G D A + N M ++GF P T +I C K ++ EA +L+ +
Sbjct: 254 TLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQ 313
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
GL + +Y LI C++G + AL + MV G P +E Y++ I Y ++ +E
Sbjct: 314 -GLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQME 371
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 102/242 (42%), Gaps = 8/242 (3%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T N ++ G+F V+ M R G P + L+ V C E ++ E + L
Sbjct: 38 VETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLA 97
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M D ++ CE G EFFR M +G + V + ++G C+
Sbjct: 98 AMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRR 157
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD---KRRVFEA-LDILKARVVKFGLFPT 422
V A V +M +G +P T LI LC R F L ++K+ K P
Sbjct: 158 YVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYK----PN 213
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I G C EGK+ A + MV +G +P+ Y+ I G+ K G+ + A L
Sbjct: 214 VHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMN 273
Query: 483 EM 484
+M
Sbjct: 274 KM 275
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 107/214 (50%), Gaps = 1/214 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN +T+ L+ G + G+F++ ++ +M + G P+ Y+Y+ ++ FC++ +++EA
Sbjct: 245 LKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAY 304
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+ + ++ D + Y +I C+ G + A + F M +G + L++ Y
Sbjct: 305 KVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTY 364
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ ++ + ++ G P T +I C R AL + + R+V+ G F
Sbjct: 365 CQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFE-RMVQNGCFAD 423
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+Y LI GLC+E ++EEA + M+ K P
Sbjct: 424 SITYGALISGLCKESRLEEAKALYEGMLDKRLVP 457
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 1/190 (0%)
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
++A F E R+ EA + EMR + V N ++ E G A + F M +G
Sbjct: 9 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
V + F LV CR G V+ + M R GF + +T V++ LC+K R +
Sbjct: 69 VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+ + R+++ G P +Y I GLC+ +++A V EMVG+G +P++ ++ IDG
Sbjct: 129 EFFR-RMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDG 187
Query: 468 YMKEGNVEMA 477
K G E A
Sbjct: 188 LCKIGWTERA 197
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 112/248 (45%), Gaps = 52/248 (20%)
Query: 245 PNVHTFNALMVGFYREGA-----------------FEKVE------------------DV 269
PN++T+NA++ GF ++G F+K+ D+
Sbjct: 282 PNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDL 341
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+ M GC PD +Y+ L++ +C++R+M E++K +++ + Y ++I G+C+
Sbjct: 342 FDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCK 401
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP---- 385
+G A F M +G + S+T+ L++G C+ ++ A +Y M K P
Sbjct: 402 VGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVT 461
Query: 386 -----------EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
E ++I V + + DKR+ +D++ ++ G + + +FL K L
Sbjct: 462 RVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALG--DVDAASLFLKKVLD 519
Query: 435 EEGKMEEA 442
E+ ++ A
Sbjct: 520 EDYAVDHA 527
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 123/322 (38%), Gaps = 41/322 (12%)
Query: 30 SSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIAL--GL--KNNP 85
+ TPP+ N A + L K ++ L + GL P ++ L GL
Sbjct: 137 TGTPPN--VVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWT 194
Query: 86 HLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFE 145
A R F S K ++ +Y +I R + A +++ V + P +
Sbjct: 195 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARA-EMLLVRMVEQGLKPNTNTYT 253
Query: 146 VLVKTYRECGSAPFVFDLLIKCCLE--VKNIE-------------KIETCVDIVRMLMSR 190
L+ + + GS F+L+ K E + NI KI+ ++RM S+
Sbjct: 254 TLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQ 313
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAGIGK------------- 235
GL T LI E + + +++ + G D A
Sbjct: 314 GLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEES 373
Query: 236 ----DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
D ++ + P T+ +++ G+ + G V+ M + GC D +Y L++
Sbjct: 374 QKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISG 433
Query: 292 FCEERRMREAEKLWEEMRDKNV 313
C+E R+ EA+ L+E M DK +
Sbjct: 434 LCKESRLEEAKALYEGMLDKRL 455
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 158/319 (49%), Gaps = 14/319 (4%)
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
ET + I+ +L G + K++ ++ ++ + KG+ +++ V +DS GI ++
Sbjct: 46 ETHLKIIEIL---GRASKLNHARCILLDMPK-KGLEWDEDMW--VLMIDSYGKEGIVQES 99
Query: 238 KRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
++ + V + +++AL R G F + + +M G EP ++++V++
Sbjct: 100 VKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWG 159
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
F ++ A + +E+M+ + + DV+ YNT+I G+C + +M AE++F EM +E +
Sbjct: 160 FFLSGKVETANRFFEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPT 219
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
VT+ L+ GY VD A+ + +M G +P T L+ LC+ ++ EA ILK
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILK 279
Query: 412 ARVVKFGLFPTEKS-YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
V K+ + PT+ S +M LI C+ G ++ A V M+ Y I+ Y K
Sbjct: 280 EMVDKY-IAPTDNSIFMRLISSHCKVGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCK 338
Query: 471 EGNVEMATMLRKEMFENQV 489
G + A L ++ E +
Sbjct: 339 AGQYDQAVKLLDKLIEKDI 357
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 190/473 (40%), Gaps = 91/473 (19%)
Query: 80 GLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPAR----DVIRVALRSP 135
G KN+ H AL+FF + + +L +H+ ++ II IL RA + AR D+ + L
Sbjct: 21 GAKNSEH-ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWD 79
Query: 136 ENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVD-----IVR----- 185
E+ ++ +++ +Y + G L K +E +E+ D I+R
Sbjct: 80 ED-----MWVLMIDSYGKEGIVQESVKLFQK--MEELGVERTIKSYDALFKVIMRRGRFM 132
Query: 186 -------MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVK 238
++S G+ T N +IW V + + ++
Sbjct: 133 MAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM---------------- 176
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
+ + P+V T+N ++ G+ R E+ E +VEM EP +Y+ L+ + ++
Sbjct: 177 KSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQV 236
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE-SSSVTFEH 357
+A +L EEM+ ++ + + Y+T++ G C +M+ A +EM + + + F
Sbjct: 237 DDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMR 296
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA----- 412
L++ +C+ G++D+A V M R E VLI C + +A+ +L
Sbjct: 297 LISSHCKVGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKD 356
Query: 413 -------------------------------------RVVKFGLF-PTEKSYMFLIKGLC 434
+++K G+ PT + LI+G
Sbjct: 357 IIVRPQSTLHMEPSAYNPIVEYLCNNGQTSKAEALVRQLMKLGVQDPT--ALNTLIRGHS 414
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+EG + A ++ M+ + + Y + + Y+K+ A M EN
Sbjct: 415 QEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKSEPADAKAALDSMIEN 467
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 112/229 (48%), Gaps = 7/229 (3%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
+ ++M + G E D + +++ + +E ++E+ KL+++M + VE + +Y+ +
Sbjct: 67 ILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIM 126
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
G A+ +F +M G+E + TF ++ G+ +G V++A + DM + P+
Sbjct: 127 RRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVI 186
Query: 389 TIEVLIGELCDKRRVFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
T +I C +++ EA +K + ++ PT +Y LIKG ++++AL++
Sbjct: 187 TYNTMINGYCRVKKMEEAEKYFVEMKGKNIE----PTVVTYTTLIKGYVSVDQVDDALRL 242
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
EM G G +P+ YS + G + A + KEM + + D
Sbjct: 243 VEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDN 291
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ H + ++ G G E+ E + E G EP+ Y+ L+ +C M A K+
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E M +V Y +I G C+ G++ RA F M +G+E + VT+ L+ G C
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN 294
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A + + M G P T VLI LC + +V EA + +VK G+ E
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA-QLFLGSLVKKGVKVNEV 353
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI GLC+ GK++ A ++ +M+ +GF P YS+ IDG ++ + AT++ ++M
Sbjct: 354 VYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDM 413
Query: 485 FENQVR 490
E ++
Sbjct: 414 MEKGIQ 419
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 190/451 (42%), Gaps = 64/451 (14%)
Query: 59 NHLLSLCRSGLTPTQF--SQIALGLKNNPHL--ALRFFSFTQHKSLCKHSLSSYATIIHI 114
HL SL +GL P + + LG L A R F + C + +Y ++H
Sbjct: 93 QHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRG-CLRTAFTYTALLHG 151
Query: 115 LSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNI 174
L A ++ A V V +R+ P ++ +V E G
Sbjct: 152 LLGAGMVREAMAVF-VGMRADSCAPDTHVYATMVHGLCEAG------------------- 191
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA--- 231
+ E ++ MS G + NALI + +++ G+D + +
Sbjct: 192 -RTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE---GMDGNRCSPNV 247
Query: 232 --------GIGKDVK---------RVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
G+ K K R+V + PNV T+ AL+ G EG + +
Sbjct: 248 RTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHL 307
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M G P+ +++SVL+ C+ ++ EA+ + K V+ + V Y ++I G C+ G+
Sbjct: 308 METNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK 367
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A+E ++M G + ++ L++G CR + A L+ DM KG + T +
Sbjct: 368 IDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTI 427
Query: 393 LIGELCDK------RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
+I EL + +++F+ +++ G+ P +Y ++ CEEG+ME+A +
Sbjct: 428 IIDELVREVGSEGPKKIFD-------KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMI 480
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+MV +G P+L Y+ I GY G V A
Sbjct: 481 VQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 114/280 (40%), Gaps = 36/280 (12%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM------- 298
N+ T+ L+ + G + + G PD Y+Y+ + +C +
Sbjct: 71 NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130
Query: 299 ----------------------------REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
REA ++ MR + D Y T++ G CE
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G AE E +G E + V + L++GYC AG+++ A+ V+ M P T
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
LI LC +V A+ +L +R+V+ GL P +Y LI+G C EG ++ A ++ M
Sbjct: 251 TELIHGLCKSGKVERAM-VLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
G P+ +S ID K VE A + + + V+
Sbjct: 310 TNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVK 349
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 48/280 (17%)
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+G VK+ V+V V+T +L+ G + G + +++ +M G PD +SYS L+
Sbjct: 340 LGSLVKKGVKVNEVVYT--SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGL 397
Query: 293 CEERRMREAEKLWEEMRDKNVEH-----------------------------------DV 317
C ++++ +A + E+M +K ++ D+
Sbjct: 398 CRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDI 457
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
V Y + +CE G M AE +M GV + VT+ L+ GY G V A +
Sbjct: 458 VTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEV 517
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR-----------VVKFGLFPTEKSY 426
M KG++P + VL+ + K ++DI K + + L Y
Sbjct: 518 MVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIY 577
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
I+ LC ++EEA M PS ++Y++ ID
Sbjct: 578 SCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 5/209 (2%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P + L+ R + E L M +N+ Y T+I +C G++ A++
Sbjct: 39 PPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQH 94
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+ +G+ S + V GYCRAG + A V+ M +G T L+ L
Sbjct: 95 LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
V EA+ + P Y ++ GLCE G+ EEA + E + GFEP++
Sbjct: 155 AGMVREAMAVFVGMRAD-SCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+Y+A IDGY G +E A + + M N+
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNR 242
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 142/353 (40%), Gaps = 65/353 (18%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
KI+ ++++ ++S G + ++LI + R K + S AT +
Sbjct: 367 KIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKL--------------SQATLMLED 412
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+++ ++ P T+ ++ RE E + ++ +M G PD +Y+V + +CEE
Sbjct: 413 MMEKGIQASPV--TYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEE 470
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM---GLSGVESSS 352
RM +AE + +M D+ V ++V YNT+I G+ +G +++A F M G E S
Sbjct: 471 GRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSY 530
Query: 353 VTFEHLV--------------------------------------------NGYCRAGDV 368
LV CR +
Sbjct: 531 TVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRL 590
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A + M P +I C + + +AL +L + + K G P +SY
Sbjct: 591 EEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDS-MTKSGYLPHLESYRI 649
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV-EMATML 480
+I LCE G A +V +++ K ++ I G +++G+V E +++L
Sbjct: 650 IISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLL 702
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 116/258 (44%), Gaps = 16/258 (6%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
DA + I + V R V PN+ T+N L+ G+ G + + M G +P+ SY+V
Sbjct: 475 DAESMIVQMVDR--GVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTV 532
Query: 288 LMAVFCEERR------------MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
L+ + ++ M++ + L E++ ++ + Y+ I C + +
Sbjct: 533 LLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEE 592
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A+ FF M + + S + +++ CR + A+ + + M + G+ P + ++I
Sbjct: 593 AKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIIS 652
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
LC+ A ++ ++K + E + LI GL ++G + E + + M G++
Sbjct: 653 SLCEGGNFRTAKEVFGDLLLKESNY-DEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQ 711
Query: 456 PSLEIYSAFIDGYMKEGN 473
PS I +A I G + N
Sbjct: 712 PSNTI-NAMITGEITVTN 728
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 59/147 (40%)
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
R E+ + ++ M P Y+ ++ C + + +A L + M +
Sbjct: 586 RVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLE 645
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+Y II CE G A+E F ++ L + ++ L+ G + G V + + M
Sbjct: 646 SYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVM 705
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFE 405
G++P + ++ GE+ V E
Sbjct: 706 KEHGYQPSNTINAMITGEITVTNEVQE 732
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 146/309 (47%), Gaps = 18/309 (5%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
+ R + RGL + TCN+ + + + E + D+ A G
Sbjct: 319 MFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFF--------DSMAAKGH------- 363
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+P++ T++ L+ G+ EG + +++ M G D Y++L+ + + M EA
Sbjct: 364 -KPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAM 422
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ +M+++ V D Y T+I F +G +A A + F +M G++ ++ + L+ G+
Sbjct: 423 LIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGF 482
Query: 363 CRAGDVDSAILVYNDMCRKGF-EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C G++ A + ++M +G P +I LC + RV EA DI V+ G P
Sbjct: 483 CMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDL-VIHIGERP 541
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
++ LI G GKME+A V M+ G EP + YSA +DGY + G ++ +L
Sbjct: 542 DVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILF 601
Query: 482 KEMFENQVR 490
+EM V+
Sbjct: 602 REMLSKGVK 610
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN--VEHDVVAYNTIIGGFCEI 330
M LG EPD SYS ++ CE+ R + A L M K+ +VV+YNT+I GF
Sbjct: 181 MPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFRE 240
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
GE+++A F EM GV VT+ ++ C+A +D A LV M GFEP+ T
Sbjct: 241 GEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTY 300
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFP---TEKSYMFLIKGLCEEGKMEEALKVQA 447
+I + E + + + + GL P T SYM LC+ GK +EA +
Sbjct: 301 NCMIHGYSILGQWKETAGMFR-EMTRRGLMPDIFTCNSYM---SSLCKHGKSKEAAEFFD 356
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNV 474
M KG +P L YS + GY EG V
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYV 383
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 118/239 (49%), Gaps = 2/239 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N L+ + + G ++ ++ +M G PD ++Y ++A F R+ +A + +M
Sbjct: 405 YNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMI 464
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV-ESSSVTFEHLVNGYCRAGDV 368
++ D + YN++I GFC G + +A+E EM G+ ++V F ++N C+ G V
Sbjct: 465 AMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRV 524
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A +++ + G P+ T LI ++ +A +L A ++ G+ P +Y
Sbjct: 525 VEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDA-MISVGIEPDVVTYSA 583
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
L+ G C G++++ L + EM+ KG +P+ Y + G +G A + EM E+
Sbjct: 584 LLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIES 642
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 133/295 (45%), Gaps = 10/295 (3%)
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR------VRPNVHTFNALMVG 256
++ G G+++ + +Y + +D+ G+ + + V P+ T+ ++
Sbjct: 389 LFNSMEGNGIVADHSVYNIL--IDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAA 446
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH- 315
F R G D + +M +G +PD Y+ L+ FC + +A++L EM + +
Sbjct: 447 FSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRP 506
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
+ V +N+II C+ G + A++ F + G +TF L++GY G ++ A V
Sbjct: 507 NTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVL 566
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
+ M G EP+ T L+ C R+ + L + + + K G+ PT +Y ++ GL
Sbjct: 567 DAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSK-GVKPTTITYGIILHGLFN 625
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+G+ A K+ EM+ G + + G + + A L K++ V+
Sbjct: 626 DGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVK 680
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 1/234 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RP+V TFN+L+ G+ G EK V M +G EPD +YS L+ +C R+ +
Sbjct: 540 RPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLI 599
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+ EM K V+ + Y I+ G G A++ EM SG T ++ G C
Sbjct: 600 LFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLC 659
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R D AI ++ + + + I +I + R+ EA ++ + + GL P
Sbjct: 660 RNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDS-ISATGLVPNA 718
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y +I L +EG +EEA + + M G PS + + I +++G + A
Sbjct: 719 STYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKA 772
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 114/237 (48%), Gaps = 7/237 (2%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPN FN+++ +EG + +D++ + +G PD +++ L+ + +M +A
Sbjct: 505 RPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFG 564
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ + M +E DVV Y+ ++ G+C G + FREM GV+ +++T+ +++G
Sbjct: 565 VLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLF 624
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK---ARVVKFGLF 420
G A + ++M G + ST +++G LC EA+ + K A VKF +
Sbjct: 625 NDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIA 684
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+I + + K EEA ++ + G P+ Y I +KEG+VE A
Sbjct: 685 IINT----MIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEA 737
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 129/282 (45%), Gaps = 19/282 (6%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
DI +++ G V T N+LI G G++ E + FG+ DA +G
Sbjct: 529 DIFDLVIHIGERPDVITFNSLI----DGYGLVGKME---KAFGV-LDAMISVG------- 573
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ P+V T++AL+ G+ R G + ++ EM G +P +Y +++ + R A
Sbjct: 574 -IEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGA 632
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+K+ EM + D+ I+GG C A F+++G V+ + +++
Sbjct: 633 KKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDA 692
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ + A +++ + G P ST V+I L + V EA D + + + K G P
Sbjct: 693 MYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEA-DNMFSLMEKSGCAP 751
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
+ + +I+ L E+G++ +A +++ GK SLE +A
Sbjct: 752 SSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTI--SLEASTA 791
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 98/252 (38%), Gaps = 60/252 (23%)
Query: 245 PNVHTFNALM----------VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
P V T+N LM VGF G F K G + D ++L+ C
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKT----------GLKTDVIVANILLKCLCH 166
Query: 295 ERRMREA-EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM--GLSGVESS 351
+R +A L M + VE D ++Y+T++ CE RA + M G +
Sbjct: 167 AKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPN 226
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
V++ +++G+ R G+V A ++++M ++G P+ T
Sbjct: 227 VVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVT---------------------- 264
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
Y I LC+ M++A V +M+ GFEP Y+ I GY
Sbjct: 265 --------------YSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSIL 310
Query: 472 GN-VEMATMLRK 482
G E A M R+
Sbjct: 311 GQWKETAGMFRE 322
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 2/184 (1%)
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EE R + V YN ++ C F +G+++ + L+ C A
Sbjct: 108 EEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHA 167
Query: 366 GDVDSAI-LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG-LFPTE 423
D A+ ++ + M G EP+ + ++ LC+ R ALD+L V K G P
Sbjct: 168 KRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNV 227
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
SY +I G EG++ +A + EM+ +G P + YS++ID K ++ A ++ ++
Sbjct: 228 VSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQ 287
Query: 484 MFEN 487
M N
Sbjct: 288 MISN 291
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
T+ L++ CRA ++ + G + + +L+ LC +R +A+++L R
Sbjct: 121 TYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHR 180
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK--GFEPSLEIYSAFIDGYMKE 471
+ + G+ P SY ++K LCE+ + + AL + MV K G P++ Y+ I G+ +E
Sbjct: 181 MPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFRE 240
Query: 472 GNVEMATMLRKEMFENQV 489
G V A L EM + V
Sbjct: 241 GEVSKACNLFHEMMQQGV 258
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 127/246 (51%), Gaps = 2/246 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEM-ARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+P+V ++ L+ G + G + D++ +M A GC P+ ++Y+ L+ C++ R+ A
Sbjct: 93 QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAAR 152
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ E R ++ DVV YNT++ ++G + A F +M G + V+F ++ G
Sbjct: 153 AVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGL 212
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRA + A+ V+N+M + F P T V+I LC ++ EA +L R+V G P
Sbjct: 213 CRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLD-RMVSEGCRPD 271
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G G+++ AL + MV +G P + Y+ ID K G V+ A + +
Sbjct: 272 LVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFR 331
Query: 483 EMFENQ 488
E+ N+
Sbjct: 332 ELVANK 337
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 120/246 (48%), Gaps = 3/246 (1%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA-EKLWEE 307
T+N L+ GF + + EM G + + + S+++ C R+ +A E
Sbjct: 27 TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDAS 86
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-GLSGVESSSVTFEHLVNGYCRAG 366
+ + + DVV+Y T+I G C++G + A + FR+M G ++ T+ LV+G C+
Sbjct: 87 LELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQD 146
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
+D+A V + ++ F P+ T L+ L RV EAL ++ + G PT S+
Sbjct: 147 RLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFT-QMTEEGYVPTLVSF 205
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+I GLC ++ +AL+V EM+ + F P+L YS IDG K ++ A L M
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265
Query: 487 NQVRQE 492
R +
Sbjct: 266 EGCRPD 271
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 6/243 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N LM ++ G ++ + +M G P S++ ++ C RR+ +A ++
Sbjct: 165 PDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEV 224
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM D++ ++V Y+ +I G C+ ++ A++ M G V + LV G+
Sbjct: 225 FNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSA 284
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG +DSA+ + M +G P+ T V+I +LC RV +A +I + +V P
Sbjct: 285 AGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFR-ELVANKCSPNVV 343
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY-MKEGNVEMATMLRKE 483
+Y LI G C +++E KV EM + P++ Y+ I G M + N E M R E
Sbjct: 344 TYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFR-E 399
Query: 484 MFE 486
M E
Sbjct: 400 MSE 402
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
V YN +I GFC ++ A REM + G++ + T ++ G CR G V A+ ++
Sbjct: 26 VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85
Query: 378 MCRKGF-EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
+P+ + LI LC RV A D+ + V G P +Y L+ GLC++
Sbjct: 86 SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+++ A V E + F P + Y+ + + G V+ A +M E
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTE 195
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G +A + FRE + +SSVT+ L+ G+C A D+D+A + +M +G + T
Sbjct: 5 GSHNQALQLFRENPCQ-LPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTT 63
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+++ LC RV +AL+ A + P SY LI GLC+ G+++ A + +MV
Sbjct: 64 SIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMV 123
Query: 451 GK-GFEPSLEIYSAFIDGYMKEGNVEMA----TMLRKEMFENQV 489
G P+ Y+A +DG K+ ++ A T RK F V
Sbjct: 124 AAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDV 167
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 200 NALIWEVSRGKGVISGYEIYREVFGLD-----------------SDATAGIGKDVKRVVR 242
NA+I + R + + E++ E+ D SD + + R+V
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265
Query: 243 --VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
RP++ + L++GF G + + M GC PD +Y+V++ C+ R+ +
Sbjct: 266 EGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDD 325
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +++ E+ +VV Y+ +IGG+C + + REM + VT+ ++
Sbjct: 326 AHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIW 382
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G + A ++ +M GF P+ T
Sbjct: 383 GLSMVDRNEEAYGMFREMSECGFVPDART 411
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ ++ + G + +++ E+ C P+ +YS L+ +C R+ E K+
Sbjct: 305 PDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV 364
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
MR+ +VV YNT+I G + A FREM G + T+ L
Sbjct: 365 ---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 196/464 (42%), Gaps = 50/464 (10%)
Query: 33 PPSDQSHNLIA-TVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQI----ALGLKNNPHL 87
PP+ ++N I +V+ H ++ + +LS +G+ P + + + PH+
Sbjct: 7 PPAAPAYNAIMDALVNTAYHDQAHKVYVRMLS---AGVAPDARTHTVRIKSFCITGRPHV 63
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
ALR + C +Y T++ L AR + LR + P + F +
Sbjct: 64 ALRLLRSLPERG-CDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRR-DVFPDVATFNNV 121
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
+ + G LL K ++ RG+SV TCN IW
Sbjct: 122 LHALCQKGDIMESGALLAK--------------------VLKRGMSVNKFTCN--IWI-- 157
Query: 208 RGKGVISGYEIYREVFGLDS-DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
+G+ G + V ++S DA + P+V T+N LM G ++ ++
Sbjct: 158 --RGLCEGGRLEEAVALVESMDA------------YIAPDVVTYNTLMRGLCKDSKVQEA 203
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
M GC PD ++Y+ ++ +C+ ++EA +L ++ K D V Y ++I G
Sbjct: 204 AQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLING 263
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
C G++ RA E F E ++ V + LV G CR G + A+ V N+M G P+
Sbjct: 264 LCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPD 323
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T ++I LC + +A ++ +VK G P ++ +I G C+ K++ AL++
Sbjct: 324 IWTYNIVINGLCKMGNISDAAVVMNDAIVK-GYLPDVFTFNTMIDGYCKRLKLDSALQLV 382
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
M G P Y++ ++G K G + +EM R
Sbjct: 383 ERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCR 426
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 113/226 (50%), Gaps = 9/226 (3%)
Query: 245 PNVHTFNALMVGFYR----EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
P+V TFN ++ G+ + + A + VE +W+ G PD +Y+ ++ C+ + +E
Sbjct: 357 PDVFTFNTMIDGYCKRLKLDSALQLVERMWM----YGIAPDAITYNSVLNGLCKAGKAKE 412
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ +EEM K + + YN +I FC+I ++ A M G+ +++F L++
Sbjct: 413 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIH 472
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G+CR GD+D A L++ + KG+ T +LIG K + A I + K G
Sbjct: 473 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISK-GYK 531
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
P +Y L+ G C+ ++ A AEMV KGF PS+ + ++
Sbjct: 532 PDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLN 577
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 123/250 (49%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P++ +N+L+ G R+G V EM GC PD ++Y++++ C+ + +A
Sbjct: 285 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAA 344
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + K DV +NT+I G+C+ ++ A + M + G+ ++T+ ++NG
Sbjct: 345 VVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGL 404
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+AG + +M KG P T +LI C ++ EA ++ R+ + GL P
Sbjct: 405 CKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI-VRMSQDGLVPD 463
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
S+ LI G C G ++ A + ++ KG+ + + ++ I Y + N++MA +
Sbjct: 464 TISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFG 523
Query: 483 EMFENQVRQE 492
EM + +
Sbjct: 524 EMISKGYKPD 533
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 115/242 (47%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+ +L+ G EG E+ +++ E +PD Y+ L+ C + + A ++
Sbjct: 252 PDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQV 311
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM + D+ YN +I G C++G ++ A + + G TF +++GYC+
Sbjct: 312 MNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCK 371
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+DSA+ + M G P+ T ++ LC + E + + ++K G P
Sbjct: 372 RLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILK-GCRPNAI 430
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI+ C+ ++EEA V M G P ++ I G+ + G+++ A +L +++
Sbjct: 431 TYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKL 490
Query: 485 FE 486
E
Sbjct: 491 DE 492
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+N+++ G + G ++V + + EM GC P+ +Y++L+ FC+ ++ EA
Sbjct: 390 IAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEAS 449
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ M + D +++NT+I GFC G++ A F+++ G +++ TF L+ Y
Sbjct: 450 GVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAY 509
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
++ A ++ +M KG++P+ T VL+ C V A + A +V G P+
Sbjct: 510 SSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAY-VHLAEMVSKGFVPS 568
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
++ ++ L ++ EA+ + MV G P +
Sbjct: 569 MATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEV 604
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 140/298 (46%), Gaps = 17/298 (5%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++ RG + V T N L+ +G+G YR+ L D R PN
Sbjct: 189 MLCRGCAPDVVTYNILLQAACKGRG-------YRQALEL---------IDFMRAEGCEPN 232
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
T+N ++ REG ++ ++ + GC+P+ +Y+ ++ FC R +A+++ +
Sbjct: 233 NVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILD 292
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
EM +N + N II C G + + + +M G ++ VT+ +++G C G
Sbjct: 293 EMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQG 352
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
+VDSA+ + ++M G +P+ T ++ LC R +E + L ++ + P ++
Sbjct: 353 NVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADR-WEDAEELMIKMSQNDRLPDNSTF 411
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+I C++G + +A +V +M KG P+ YS I G K G +E A L EM
Sbjct: 412 NTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEM 469
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 124/249 (49%), Gaps = 7/249 (2%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV T+NA++ G +G + ++ M GC+PD +Y+ ++ C R +AE+L
Sbjct: 337 NVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELM 396
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M + D +NTII +C+ G + +A E F++M G +S T+ ++ G +A
Sbjct: 397 IKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKA 456
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G ++ A+ + N+M KGF + VL L + ++ E + ++ ++ G+ P
Sbjct: 457 GKMEQALELLNEMANKGFNTD-KMYRVLTESLNKEDKIEEVVQVVH-KLQDSGISPQTVL 514
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY-----SAFIDGYMKEGNVEMATML 480
Y ++ GLC GK + A+ V A+MV G P Y F +GY KE ++ +
Sbjct: 515 YNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLC 574
Query: 481 RKEMFENQV 489
+++ N +
Sbjct: 575 SRDVLSNSL 583
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 131/282 (46%), Gaps = 9/282 (3%)
Query: 215 GYEIYREVFG--LDSDATAGIGKDVKRVVRVRP------NVHTFNALMVGFYREGAFEKV 266
G E +G +D AG+ +D +RVV P + + N L+ G
Sbjct: 123 GPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADA 182
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
V M GC PD +Y++L+ C+ R R+A +L + MR + E + V YN II
Sbjct: 183 LVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDA 242
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
C G++ +A E + G + ++V + ++ G+C A + ++M R+ P
Sbjct: 243 MCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPN 302
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
+T+ V+I LC ++ + + + + ++ K G +Y +I G+CE+G ++ AL++
Sbjct: 303 EATLNVIINTLC-RKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELL 361
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+ M G +P + Y+ + G E A L +M +N
Sbjct: 362 SNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND 403
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 4/256 (1%)
Query: 232 GIGKDVKRVVRV---RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
G D RVV T+ AL+ G+ R G E V M Y+++ L
Sbjct: 110 GRPADAARVVEACGPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPL 169
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ CE R+ +A + + M + DVV YN ++ C+ +A E M G
Sbjct: 170 IHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGC 229
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
E ++VT+ +++ CR GDVD A + N + +G +P ++ C R +A +
Sbjct: 230 EPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADE 289
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
IL +V+ P E + +I LC +G +++ +M G ++ Y+A I G
Sbjct: 290 ILD-EMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGM 348
Query: 469 MKEGNVEMATMLRKEM 484
++GNV+ A L M
Sbjct: 349 CEQGNVDSALELLSNM 364
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 109/209 (52%), Gaps = 2/209 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P++ T+N ++ G +E E++ ++M++ PD +++ +++ +C++ + +A +
Sbjct: 370 KPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFE 429
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++++M +K + Y+TIIGG + G+M +A E EM G + + + L
Sbjct: 430 VFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLN 488
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ ++ + V + + G P+ ++ LC + A+D+L A +V G P E
Sbjct: 489 KEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVL-ADMVSCGCMPDE 547
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
+Y+ LI+GL EG +EA ++ + + +
Sbjct: 548 STYIILIEGLFYEGYSKEARELLSRLCSR 576
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
DV N ++ C G R + R + G E+++ T+ LV+GYCRAG ++ A V
Sbjct: 95 DVPLANRLVRDLCRRG---RPADAARVVEACGPEATAATYGALVDGYCRAGLLEDARRVV 151
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
M LI LC++ RV +AL +L + + G P +Y L++ C+
Sbjct: 152 GGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCR-GCAPDVVTYNILLQAACK 210
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+AL++ M +G EP+ Y+ ID +EG+V+ A L
Sbjct: 211 GRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQAREL 255
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P +N +++G R G + DV +M GC PD +Y +L+ E +EA
Sbjct: 508 ISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEAR 567
Query: 303 KLWEEMRDKNV 313
+L + ++V
Sbjct: 568 ELLSRLCSRDV 578
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ H + ++ G G E+ E + E G EP+ Y+ L+ +C M A K+
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E M +V Y +I G C+ G++ RA F M +G+E + VT+ L+ G C
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN 294
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A + + M G P T VLI LC + +V EA + +VK G+ E
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA-QLFLGSLVKKGVKVNEV 353
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI GLC+ GK++ A ++ +M+ +GF P YS+ IDG ++ + AT++ ++M
Sbjct: 354 VYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDM 413
Query: 485 FENQVR 490
E ++
Sbjct: 414 MEKGIQ 419
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 187/447 (41%), Gaps = 56/447 (12%)
Query: 59 NHLLSLCRSGLTPTQF--SQIALGLKNNPHL--ALRFFSFTQHKSLCKHSLSSYATIIHI 114
HL SL +GL P + + LG L A R F + C + +Y ++H
Sbjct: 93 QHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRG-CLRTAFTYTALLHG 151
Query: 115 LSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP---------------- 158
L A ++ A V V +R+ P ++ +V E G
Sbjct: 152 LLGAGMVREAMTVF-VGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEP 210
Query: 159 --FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGY 216
V++ LI N ++E + + + S V T LI G+
Sbjct: 211 NIVVYNALID---GYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELI------HGLCKSG 261
Query: 217 EIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
++ R + AG+ PNV T+ AL+ G EG + + M
Sbjct: 262 KVERAMVLFSRMVEAGL----------EPNVVTYTALIQGQCNEGHLQCAFRLLHLMETN 311
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G P+ +++SVL+ C+ ++ EA+ + K V+ + V Y ++I G C+ G++ A
Sbjct: 312 GLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAA 371
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+E ++M G + ++ L++G CR + A L+ DM KG + T ++I E
Sbjct: 372 DELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDE 431
Query: 397 LCDK------RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
L + +++F+ +++ G+ P +Y ++ CEEG+ME+A + +MV
Sbjct: 432 LVREVGSEGPKKIFD-------KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMV 484
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+G P+L Y+ I GY G V A
Sbjct: 485 DRGVFPNLVTYNTLIRGYANLGLVSQA 511
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 114/280 (40%), Gaps = 36/280 (12%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM------- 298
N+ T+ L+ + G + + G PD Y+Y+ + +C +
Sbjct: 71 NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130
Query: 299 ----------------------------REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
REA ++ MR + D Y T++ G CE
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEA 190
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G AE E +G E + V + L++GYC AG+++ A+ V+ M P T
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
LI LC +V A+ +L +R+V+ GL P +Y LI+G C EG ++ A ++ M
Sbjct: 251 TELIHGLCKSGKVERAM-VLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
G P+ +S ID K VE A + + + V+
Sbjct: 310 TNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVK 349
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 48/280 (17%)
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+G VK+ V+V V+T +L+ G + G + +++ +M G PD +SYS L+
Sbjct: 340 LGSLVKKGVKVNEVVYT--SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGL 397
Query: 293 CEERRMREAEKLWEEMRDKNVEH-----------------------------------DV 317
C ++++ +A + E+M +K ++ D+
Sbjct: 398 CRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDI 457
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
V Y + +CE G M AE +M GV + VT+ L+ GY G V A +
Sbjct: 458 VTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEV 517
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR-----------VVKFGLFPTEKSY 426
M KG++P + VL+ + K ++DI K + + L Y
Sbjct: 518 MVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIY 577
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
I+ LC ++EEA M PS ++Y++ ID
Sbjct: 578 SCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 5/209 (2%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P + L+ R + E L M +N+ Y T+I +C G++ A++
Sbjct: 39 PPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQH 94
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+ +G+ S + V GYCRAG + A V+ M +G T L+ L
Sbjct: 95 LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
V EA+ + P Y ++ GLCE G+ EEA + E + GFEP++
Sbjct: 155 AGMVREAMTVFVGMRAD-SCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+Y+A IDGY G +E A + + M N+
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNR 242
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 155/340 (45%), Gaps = 53/340 (15%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY--REVFGLDSDA--- 229
+ + V +V + GL V N +I + + + + + EI+ E G+ +DA
Sbjct: 699 NRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTY 758
Query: 230 --------TAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
+G D R++R + PNV F AL+ F +EG + ++++ EM R
Sbjct: 759 NTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIR 818
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
P+ +Y+ L+ FC + R+ +A+ +++ M K DVV YNT+I GFC+ +
Sbjct: 819 RSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 878
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
+ F EM G+ + T+ L++GYC+AG ++ A V+N M G P+ T +L+
Sbjct: 879 GMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLD 938
Query: 396 ELCDKRRVFEAL-------------DILKARVVKFGLFPTEK------------------ 424
LC+ ++ +AL DI+ ++ G+ +K
Sbjct: 939 CLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKL 998
Query: 425 ---SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+Y+ +I GLC G EA K+ M GF PS IY
Sbjct: 999 DAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIY 1038
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 127/260 (48%), Gaps = 3/260 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
S A A +GK +K + +P++ T +L+ GF + F++ + MA LG EP+ Y+
Sbjct: 667 SLALALLGKMMK--LGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYN 724
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ C+ R + A +++ M K + D V YNT+I G C G A R+M
Sbjct: 725 TVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKR 784
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
++ + + F L++ + + G++ A +Y +M R+ P T LI C + R+ +A
Sbjct: 785 KIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDA 844
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ V K G FP +Y LI G C+ ++E+ +K+ EM +G Y+ I
Sbjct: 845 KHMFDLMVSK-GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIH 903
Query: 467 GYMKEGNVEMATMLRKEMFE 486
GY + G + +A + M +
Sbjct: 904 GYCQAGKLNVAQKVFNRMVD 923
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 130/261 (49%), Gaps = 15/261 (5%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ P+V TF AL+ F ++G ++ ++++ +M + P+ +Y+ L+ C R+ A
Sbjct: 236 RINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHA 295
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+K ++ M K +VV YNT+I GFC+ + + F+ M G+ + T+ L++G
Sbjct: 296 KKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHG 355
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
YC+ G + A +++ M G P+ T +L+ LC + A+ VKF
Sbjct: 356 YCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAM-------VKFNDMR 408
Query: 422 TEKSYM------FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ + Y+ +I GLC+ K+EEA ++ + +G +P Y+ I G K G
Sbjct: 409 SGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 468
Query: 476 MATMLRKEMFENQV--RQEDG 494
A L + M E+ + + EDG
Sbjct: 469 EADELFRRMKEDGIICQAEDG 489
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 146/331 (44%), Gaps = 20/331 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+ F +LI C + + ++ +M G + T +L+ G G
Sbjct: 651 YSFTILIHCFCRC---SRFSLALALLGKMMKLGFQPSIVTLGSLL------NGFCQGNRF 701
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
V +DS A G+ PNV +N ++ G + +++ M + G
Sbjct: 702 QEAVSLVDSMAELGL----------EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGI 751
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
D +Y+ L++ C R +A +L +M + ++ +V+ + +I F + G + A+
Sbjct: 752 VADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKN 811
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
++EM V + +T+ L+NG+C G + A +++ M KG P+ T LI C
Sbjct: 812 LYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFC 871
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+RV + + + + GL +Y LI G C+ GK+ A KV MV G P +
Sbjct: 872 KSKRVEDGMKLF-CEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDI 930
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
Y+ +D G +E A ++ +++ +NQ+
Sbjct: 931 VTYNILLDCLCNNGKIEKALVMVEDLQKNQM 961
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 131/261 (50%), Gaps = 19/261 (7%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
I+R + R ++ V T ALI + + E+Y+++ + IG
Sbjct: 228 ILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQML------QSSIG-------- 273
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
PN T+N+L+ G G + + MA GC P+ +Y+ L+ FC+ RR+ +
Sbjct: 274 --PNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGM 331
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL++ M + + D YNT+I G+C++G++ A++ F M GV +T L++G
Sbjct: 332 KLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGL 391
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEG-STIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C G++ SA++ +NDM R G + G ++I LC +V EA ++ R+ G+ P
Sbjct: 392 CVNGEIGSAMVKFNDM-RSGEKYLGIVAYNIMIHGLCKADKVEEAWELF-CRLPVEGVKP 449
Query: 422 TEKSYMFLIKGLCEEGKMEEA 442
++Y +I GLC+ G EA
Sbjct: 450 DARTYTIMILGLCKNGPRREA 470
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 118/242 (48%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ ++++F L+ F R F + +M +LG +P + L+ FC+ R +EA
Sbjct: 646 ISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAV 705
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L + M + +E +VV YNT+I G C+ ++ A E F M G+ + +VT+ L++G
Sbjct: 706 SLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGL 765
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +G A + DM ++ +P LI + + EA ++ K +++ + P
Sbjct: 766 CNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYK-EMIRRSVHPN 824
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI G C +G++ +A + MV KG P + Y+ I G+ K VE L
Sbjct: 825 ILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 884
Query: 483 EM 484
EM
Sbjct: 885 EM 886
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 109/237 (45%)
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L GF FE D+++EM + P ++ L+ RR ++M
Sbjct: 36 LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ HD+ ++ +I FC ++ A +M G + S VTF L++G+C + A
Sbjct: 96 ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+ M + G+EP LI LC V AL++L K L +Y L+ G
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
LC G+ +A ++ +M + P + ++A ID ++K+GN++ A L K+M ++ +
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSI 272
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 116/244 (47%), Gaps = 2/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ ++++F L+ F R + +M +LG +P ++ L+ FC R+ +A
Sbjct: 96 ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG-VESSSVTFEHLVNG 361
L M E +VV YNT+I C+ G++ A E EM G + + VT+ L+ G
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C +G+ A + DM ++ P+ T LI + + EA ++ K ++++ + P
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYK-QMLQSSIGP 274
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI GLC G++ A K M KG P++ Y+ I+G+ K VE L
Sbjct: 275 NTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLF 334
Query: 482 KEMF 485
+ M+
Sbjct: 335 QRMY 338
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 119/247 (48%), Gaps = 5/247 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ F ++ + F+ V ++ +M LG D YS+++L+ FC R A L
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALAL 672
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M + +V +++ GFC+ A M G+E + V + ++NG C+
Sbjct: 673 LGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCK 732
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D+++A+ ++ M +KG + T LI LC+ R +A +L+ +VK + P
Sbjct: 733 NRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRD-MVKRKIDPNVI 791
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ LI +EG + EA + EM+ + P++ Y++ I+G+ +G + A K M
Sbjct: 792 FFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDA----KHM 847
Query: 485 FENQVRQ 491
F+ V +
Sbjct: 848 FDLMVSK 854
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 1/227 (0%)
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
F+ ++ EM + P ++ ++ + + L+ +M + + HD+ ++
Sbjct: 596 FDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTI 655
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I FC + A +M G + S VT L+NG+C+ A+ + + M G
Sbjct: 656 LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
EP +I LC R + AL+I + K G+ +Y LI GLC G+ +A
Sbjct: 716 LEPNVVIYNTVINGLCKNRDLNNALEIFYG-MEKKGIVADAVTYNTLISGLCNSGRWTDA 774
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ +MV + +P++ ++A ID ++KEGN+ A L KEM V
Sbjct: 775 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSV 821
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 33/239 (13%)
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRV 243
++ S+G V T N LI + + V G ++++ ++ GL D
Sbjct: 301 LMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDT-------------- 346
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
T+N L+ G+ + G +D++ M G PD ++ +L+ C + A
Sbjct: 347 ----FTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMV 402
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ +MR +VAYN +I G C+ ++ A E F + + GV+ + T+ ++ G C
Sbjct: 403 KFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLC 462
Query: 364 RAGDVDSAILVYNDMCRKG---------FEPEGSTIEVLIGE--LCDKRR--VFEALDI 409
+ G A ++ M G G+ +V +G +C KRR + E+ D+
Sbjct: 463 KNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDL 521
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 128/250 (51%), Gaps = 15/250 (6%)
Query: 231 AGIGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
+ K K V+R +P +TF+ +++GF R+G E + M + CEP+ ++Y+++
Sbjct: 38 GNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIV 97
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ C R +A + M ++ VV +NT+I FC+ G + A + F + G
Sbjct: 98 INACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGF 157
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRR 402
+++ + L+NGY + ++D A ++Y +M +KG P+G T +L+ G D R
Sbjct: 158 SPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDR 217
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ + + +L GL P + + GLC G+++EA++ +M+ KG PS+ ++
Sbjct: 218 LLKDISVL-------GLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFN 270
Query: 463 AFIDGYMKEG 472
+ I Y + G
Sbjct: 271 SVIAAYSQAG 280
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 96/172 (55%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V F+A + G ++G E+ +V++EM R G P+ ++Y+ L+ FC+ ++ EA
Sbjct: 367 IFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEAL 426
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL + MR + + D+ N IIGG C+ G M A F +M +G+ +T+ L+NGY
Sbjct: 427 KLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGY 486
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
C+A D+ +A + N M G P+ +T + I C RR+ A+ +L V
Sbjct: 487 CKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELV 538
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 17/269 (6%)
Query: 185 RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVR 244
++++ GL+ STC++L+ +S + G +AT IG+ +++ + V
Sbjct: 290 KLMVHFGLTPSPSTCSSLLMGLS--------------INGRLQEATELIGQMIEKGLSV- 334
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
N F L+ F++ G + +W EM R G PD ++S + ++ + EA +
Sbjct: 335 -NNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNV 393
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM K + + AYN++I GFC+ G++ A + + M G+ T ++ G C+
Sbjct: 394 FLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCK 453
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + SAI V+ DM + G P+ T LI C + A D L R+ G P
Sbjct: 454 QGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNA-DNLVNRMYASGSNPDLT 512
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+Y I G C +M A+ + E+V G
Sbjct: 513 TYNIRIHGFCSSRRMNRAVLMLDELVSAG 541
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 151/342 (44%), Gaps = 27/342 (7%)
Query: 153 ECGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKG 211
C F ++++I CC+ + + + +++ RG + V T N +I +
Sbjct: 86 HCEPNAFAYNIVINACCIRGRTSDALAW----FNLMIERGCNPTVVTFNTVINAFCKEGN 141
Query: 212 VISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWV 271
V+ +++ D + + PN +N LM G+ + ++ ++
Sbjct: 142 VVEARKLF----------------DGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYE 185
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM + G PD ++++L++ + R + ++L +++ + D ++ + G C G
Sbjct: 186 EMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAG 245
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A EF +M G+ S + F ++ Y +AG D A Y M G P ST
Sbjct: 246 RLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCS 305
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
L+ L R+ EA +++ ++++ GL ++ L+ + G + A + EM
Sbjct: 306 SLLMGLSINGRLQEATELI-GQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMER 364
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMA-----TMLRKEMFENQ 488
+G P + +SAFIDG K+G VE A MLRK + N
Sbjct: 365 RGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNN 406
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 117/243 (48%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ FN+++ + + G +K + + M G P + S L+ R++EA
Sbjct: 262 LSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEAT 321
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L +M +K + + +A+ ++ F + G++ A+ + EM G+ V F ++G
Sbjct: 322 ELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGL 381
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G V+ A V+ +M RKG P LI C ++ EAL + K + GL P
Sbjct: 382 SKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHR-GLLPD 440
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ +I GLC++G+M A+ V +M G P + Y+ I+GY K ++ A L
Sbjct: 441 IFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVN 500
Query: 483 EMF 485
M+
Sbjct: 501 RMY 503
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 143/311 (45%), Gaps = 21/311 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSDATAGI 233
+++ ++ + ++ +GLS + N++I S+ +E Y+ + FGL
Sbjct: 246 RLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLT------- 298
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
P+ T ++L++G G ++ ++ +M G + +++VL+ F
Sbjct: 299 -----------PSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFF 347
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ + A+ LW EM + + DVVA++ I G + G + A F EM G+ ++
Sbjct: 348 KRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNF 407
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
+ L+ G+C+ G ++ A+ + M +G P+ T ++IG LC + R+ A+++
Sbjct: 408 AYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVF-MD 466
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+ + GL P +Y LI G C+ M A + M G P L Y+ I G+
Sbjct: 467 MHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRR 526
Query: 474 VEMATMLRKEM 484
+ A ++ E+
Sbjct: 527 MNRAVLMLDEL 537
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 1/185 (0%)
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A ++ MR+ V + +G+ + F+++ G + TF ++
Sbjct: 4 QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
G+CR G + + + M + EP ++I C + R +AL + + G
Sbjct: 64 LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIER-GC 122
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
PT ++ +I C+EG + EA K+ + GF P+ +Y+ ++GY+K ++ A M
Sbjct: 123 NPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANM 182
Query: 480 LRKEM 484
L +EM
Sbjct: 183 LYEEM 187
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 237 VKRVVRVR---PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
+++V+R R P++ T N ++ G ++G +V+++M + G PD +Y+ L+ +C
Sbjct: 428 LEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYC 487
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ M A+ L M D+ YN I GFC M RA E+ +G+ S S
Sbjct: 488 KAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGILSFSF 547
Query: 354 TFEHLVNGYCR 364
+N + +
Sbjct: 548 ACPPTLNAHTK 558
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 135/283 (47%), Gaps = 39/283 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAVFCEERRMREA 301
V+P+ +NAL+ G +R G FEK VW ++ R G P+ +Y+V++ C+ +EA
Sbjct: 225 VQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEA 284
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+WE M N + D++ Y T+I G C ++ A + EM +G+ V + L+ G
Sbjct: 285 GDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKG 344
Query: 362 YCRAGDVDSA--------------ILVYNDMCRKGFE---------------------PE 386
+C AG V A + YN M + F+ P+
Sbjct: 345 FCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPD 404
Query: 387 GSTIEVLIGELCDKRRVFEALDIL-KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
T +I LC+K ++L IL +AR L E SY +I GLC++G++++A+K+
Sbjct: 405 MVTFSTMIHGLCEKGFANKSLQILEEARTSGKEL--DEFSYSSMISGLCKDGRLDDAVKL 462
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
++ F+P+ IY+A I+G+ + A + +M EN
Sbjct: 463 YEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAEND 505
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 36/284 (12%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P++ T+ ++ G R + V+ EM + G PD Y+ L+ FC R+ EA K
Sbjct: 297 QPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWK 356
Query: 304 LWEEM-----------------------------------RDKNVEHDVVAYNTIIGGFC 328
W+ M +D ++ D+V ++T+I G C
Sbjct: 357 FWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLC 416
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
E G ++ + E SG E ++ +++G C+ G +D A+ +Y + F+P
Sbjct: 417 EKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSH 476
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
LI C + +A+ + +++ + PT +Y LI GLC+ K EA + E
Sbjct: 477 IYNALINGFCQASKFSDAIRVY-SQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTRE 535
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
M+ KG + Y + I G ++ ++ A L ++ + ++ +
Sbjct: 536 MLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTD 579
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 126/246 (51%), Gaps = 2/246 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ TF+ ++ G +G K + E G E D +SYS +++ C++ R+ +A
Sbjct: 401 LSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAV 460
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL+E++ + + + YN +I GFC+ + + A + +M + +++T+ L++G
Sbjct: 461 KLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGL 520
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A A +M KG + +T LI LC +++ AL L +++ GL
Sbjct: 521 CKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGAL-ALWNQILDKGLQTD 579
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGK-GFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ LI GLC GK++EA ++ +EM K P++ Y+ +DG+ + G + A L
Sbjct: 580 VVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLW 639
Query: 482 KEMFEN 487
+ EN
Sbjct: 640 MAILEN 645
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 2/234 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN H +NAL+ GF + F V+ +MA C P +Y+ L+ C+ + EA +
Sbjct: 472 KPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASR 531
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
EM +K DV Y ++I G C ++ A + ++ G+++ V L++G C
Sbjct: 532 FTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLC 591
Query: 364 RAGDVDSAILVYNDMCRK-GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
AG VD A + ++M K P T L+ + F+ L +++ GL P
Sbjct: 592 SAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYET-GCFDKAASLWMAILENGLVPD 650
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
SY IKGLC + E +++ EM+ G P+ ++ + +K G +++
Sbjct: 651 IISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQI 704
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 112/243 (46%), Gaps = 9/243 (3%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ PN+ T+N ++ G ++ ++ + G PD +YS LM+ F + R+ A
Sbjct: 154 RIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNA 213
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA----EEFFREMGLSGVESSSVTFEH 357
L +EM V+ D V YN ++GG GE +A E+ R+ G S + T+
Sbjct: 214 LYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGAS---PNLATYNV 270
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
+++G C+ G A V+ M +P+ T +I LC V A + + ++K
Sbjct: 271 MLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVY-SEMIKT 329
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
GL P Y L+KG C G++ EA K M G ++ Y+ + G G V+ A
Sbjct: 330 GLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKA 388
Query: 478 TML 480
T L
Sbjct: 389 TDL 391
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 110/241 (45%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++++++ G ++G + ++ +++ +P+ + Y+ L+ FC+ + +A +++ +M
Sbjct: 442 SYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQM 501
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ + + YNT+I G C+ + A F REM G T+ L+ G CR +
Sbjct: 502 AENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKI 561
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D A+ ++N + KG + + +LI LC +V EA +L K P +Y
Sbjct: 562 DGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNT 621
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
L+ G E G ++A + ++ G P + Y+ I G L EM +
Sbjct: 622 LMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASG 681
Query: 489 V 489
+
Sbjct: 682 I 682
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 6/273 (2%)
Query: 224 GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG----CE 279
L DA + + + P V + NAL+ F R F + + ++
Sbjct: 97 ALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIA 156
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P+ +Y++++ C + A L++ +R + + D + Y+T++ GF + + A
Sbjct: 157 PNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYL 216
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK-GFEPEGSTIEVLIGELC 398
EM V+ +V + L+ G R G+ + A+ V+ + R G P +T V++ LC
Sbjct: 217 LDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLC 276
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
EA D+ + R+V P +Y +I GLC ++ A +V +EM+ G P +
Sbjct: 277 KLGMFKEAGDVWE-RMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDV 335
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
IY++ + G+ G V A M + +R
Sbjct: 336 VIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRN 368
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 32/225 (14%)
Query: 126 DVIRVALRSPEND--PKLKLFEVLV----KTYRECGSAPFVFDLLIKCCLEVKNI----- 174
D IRV + END P + L+ K + ++ F ++L K C+ N
Sbjct: 493 DAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLI 552
Query: 175 ------EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSD 228
+KI+ + + ++ +GL V N LI G+ S ++ D
Sbjct: 553 RGLCRDKKIDGALALWNQILDKGLQTDVVMHNILI------HGLCSAGKV---------D 597
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
+ + ++K PNV T+N LM GFY G F+K +W+ + G PD SY+
Sbjct: 598 EASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTR 657
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
+ C R E +L EM + + +N ++ + G +
Sbjct: 658 IKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPI 702
>gi|222640196|gb|EEE68328.1| hypothetical protein OsJ_26607 [Oryza sativa Japonica Group]
Length = 461
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 134/263 (50%), Gaps = 9/263 (3%)
Query: 231 AGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE-MARLGCEPDCYSYSVLM 289
AG+G +K+ RV P + F L+ E ++ + M LGC P +SY++L+
Sbjct: 119 AGLGNVIKKGYRVEPII--FTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILL 176
Query: 290 AVFCEERRMREAEKLWEEMRDK--NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
C E R +EA +L M D + DVV+Y+TII G + G+ +A + EM G
Sbjct: 177 KGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERG 236
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ VT+ +V C+A +D A+ V N M + G P+ T ++ C + EA+
Sbjct: 237 ILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAI 296
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
IL+ ++ G+ P +Y L+ LC+ G+ EA K+ M+ +G +P++ YS + G
Sbjct: 297 GILE-KMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHG 355
Query: 468 YMKEGN-VEMATMLRKEMFENQV 489
Y +G VEM +L ++ +N+
Sbjct: 356 YATKGALVEMRDLL--DLMQNEA 376
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 9/184 (4%)
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
+R N VA ++ MAR+ + V + T+ L+ CRAG
Sbjct: 61 IRSLNRALAAVARDSPAAAVSGFNRMARSSD-------GAVTPTLHTYGILIGCCCRAGR 113
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+D ++ +KG+ E L+ LC ++R A++I+ R+ + G P SY
Sbjct: 114 LDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYN 173
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFE--PSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
L+KGLC E + +EAL++ M G + P + YS IDG KEG+ + A EM
Sbjct: 174 ILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEML 233
Query: 486 ENQV 489
E +
Sbjct: 234 ERGI 237
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 192/432 (44%), Gaps = 54/432 (12%)
Query: 82 KNNPHLALRFFSFT--QHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDP 139
+ N LAL+ F + H H+ +Y +I+ LSRAR P ++ LR+ + P
Sbjct: 59 QQNIDLALQIFLYAGKSHPGFT-HNYDTYHSILFKLSRARAFDPVESLM-ADLRN--SYP 114
Query: 140 KLK----LFEVLVKTYRECG---SAPFVF----DLLIKCCLEVKNIEKIETCV------- 181
+K LF L++ Y G S+ +F D +K +++ + T +
Sbjct: 115 PIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVK-----RSVRSLNTLLNVLIQNQ 169
Query: 182 --DIVRMLM-----SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
D+V + S G++ + TCN L+ + + + S Y++ LD + G+
Sbjct: 170 RFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKV------LDEIPSMGL- 222
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
PN+ T+ ++ G+ G E + V EM G PD +Y+VLM +C+
Sbjct: 223 ---------VPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCK 273
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R EA + ++M +E + V Y +I C+ + A F EM S
Sbjct: 274 LGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSL 333
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+++ C VD A ++ M + P+ + + LI LC + RV EA +
Sbjct: 334 CCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-- 391
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ G P+ +Y LI G+CE+G++ EA ++ +M + +P+ Y+ I+G K GNV
Sbjct: 392 FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNV 451
Query: 475 EMATMLRKEMFE 486
+ + +EM E
Sbjct: 452 KEGVRVLEEMLE 463
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 39/214 (18%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
+W +M + C PD S L+ C+E R+ EA KL++E ++ ++ YNT+I G C
Sbjct: 353 LWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIP-SLLTYNTLIAGMC 411
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
E GE+ A + +M + ++ T+ L+ G + G+V + V +M
Sbjct: 412 EKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEM---------- 461
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV--Q 446
++ G FP + +++ L +GL + GK E+A+K+
Sbjct: 462 --------------------------LEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSM 495
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
A M GK + S E++ G + +G + + +L
Sbjct: 496 AVMNGKVDKESWELFLKKFAGELDKGVLPLKELL 529
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G P T +L+ LC K + A +L + GL P +Y ++ G G ME
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLD-EIPSMGLVPNLVTYTTILGGYVARGDMES 244
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
A +V EM+ +G+ P Y+ +DGY K G A + +M +N++
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEI 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + L+ +EG + ++ E + G P +Y+ L+A CE+ + EA +L
Sbjct: 364 PDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRL 422
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W++M ++ + + YN +I G + G + EM G + TF L G +
Sbjct: 423 WDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQK 482
Query: 365 AGDVDSAILV 374
G + A+ +
Sbjct: 483 LGKEEDAMKI 492
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ H + ++ G G E+ E + E G EP+ Y+ L+ +C M A K+
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E M +V Y +I G C+ G++ RA F M +G+E + VT+ L+ G C
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN 294
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A + + M G P T VLI LC + +V EA + +VK G+ E
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA-QLFLGSLVKKGVKVNEV 353
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI GLC+ GK++ A ++ +M+ +GF P YS+ IDG ++ + AT++ ++M
Sbjct: 354 VYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDM 413
Query: 485 FENQVR 490
E ++
Sbjct: 414 MEKGIQ 419
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 189/444 (42%), Gaps = 50/444 (11%)
Query: 59 NHLLSLCRSGLTPTQF--SQIALGLKNNPHL--ALRFFSFTQHKSLCKHSLSSYATIIHI 114
HL SL +GL P + + LG L A R F + C + +Y ++H
Sbjct: 93 QHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRG-CLRTAFTYTALLHG 151
Query: 115 LSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECG-------------SAPFVF 161
L A ++ A V V +R+ P ++ +V E G S F
Sbjct: 152 LLGAGMVREAMAVF-VGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEP 210
Query: 162 DLLIKCCL--EVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
++++ L N ++E + + + S V T LI G+ ++
Sbjct: 211 NIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELI------HGLCKSGKVE 264
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
R + AG+ PNV T+ AL+ G EG + + M G
Sbjct: 265 RAMVLFSRMVEAGL----------EPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLV 314
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P+ +++SVL+ C+ ++ EA+ + K V+ + V Y ++I G C+ G++ A+E
Sbjct: 315 PNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADEL 374
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
++M G + ++ L++G CR + A L+ DM KG + T ++I EL
Sbjct: 375 MQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVR 434
Query: 400 K------RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ +++F+ +++ G+ P +Y ++ CEEG+ME+A + +MV +G
Sbjct: 435 EVGSEGPKKIFD-------KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG 487
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMA 477
P+L Y+ I GY G V A
Sbjct: 488 VFPNLVTYNTLIRGYANLGLVSQA 511
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 114/280 (40%), Gaps = 36/280 (12%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM------- 298
N+ T+ L+ + G + + G PD Y+Y+ + +C +
Sbjct: 71 NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130
Query: 299 ----------------------------REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
REA ++ MR + D Y T++ G CE
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G AE E +G E + V + L++GYC AG+++ A+ V+ M P T
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
LI LC +V A+ +L +R+V+ GL P +Y LI+G C EG ++ A ++ M
Sbjct: 251 TELIHGLCKSGKVERAM-VLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
G P+ +S ID K VE A + + + V+
Sbjct: 310 TNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVK 349
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 122/279 (43%), Gaps = 42/279 (15%)
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+G VK+ V+V V+T +L+ G + G + +++ +M G PD +SYS L+
Sbjct: 340 LGSLVKKGVKVNEVVYT--SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGL 397
Query: 293 CEERRMREAEKLWEEMRDKNVEH-----------------------------------DV 317
C ++++ +A + E+M +K ++ D+
Sbjct: 398 CRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDI 457
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
V Y + +CE G M AE +M GV + VT+ L+ GY G V A +
Sbjct: 458 VTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEV 517
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT---EKSYMFLIKGLC 434
M KG++P + VL+ + K ++DI K +K L + E + LI GL
Sbjct: 518 MVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMK-DLQESNYDEIVWKILIYGLL 576
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
++G + E + + M G++PS I +A I G + N
Sbjct: 577 QKGSVAEFSSLLSVMKEHGYQPSNTI-NAMITGEITVTN 614
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 5/209 (2%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P + L+ R + E L M +N+ Y T+I +C G++ A++
Sbjct: 39 PPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQH 94
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+ +G+ S + V GYCRAG + A V+ M +G T L+ L
Sbjct: 95 LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
V EA+ + P Y ++ GLCE G+ EEA + E + GFEP++
Sbjct: 155 AGMVREAMAVFVGMRAD-SCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+Y+A IDGY G +E A + + M N+
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNR 242
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 136/306 (44%), Gaps = 50/306 (16%)
Query: 231 AGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE-MARLGCEPDCYSYSVLM 289
A +G VK+ RV + TF L+ G + D+ + M LGC PD +SY+ L+
Sbjct: 113 AALGNVVKKGFRV--DAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLL 170
Query: 290 AVFCEERRMREAEKLWEEMRDK---NVEHDVVAYNTIIGGF------------------- 327
C+E R +EA +L M D DVV+YNT++ GF
Sbjct: 171 KGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAME 230
Query: 328 ------------------------CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
C G+ A ++M GVE + VT+ L+N C
Sbjct: 231 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLC 290
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G A +++ M ++G EP+ +T L+ C + RV E+ + +V+ G+ P
Sbjct: 291 KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDL-MVRIGVKPDI 349
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI G C GKM+EA K+ A MV G +P + Y I+GY + ++ A L KE
Sbjct: 350 ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE 409
Query: 484 MFENQV 489
M + V
Sbjct: 410 MVSSGV 415
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 120/231 (51%), Gaps = 9/231 (3%)
Query: 245 PNVHTFNALMVGFYREG--------AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
P+V ++N ++ GF++EG A +K +V M + G PDC +Y+ ++ +C
Sbjct: 199 PDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 258
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ +EA ++MR VE +VV Y++++ C+ G A + F M G+E T+
Sbjct: 259 QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYR 318
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L+ G+C+ G V + +++ M R G +P+ T LI C ++ EA +L A +V
Sbjct: 319 TLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL-ASMVS 377
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
G+ P +Y LI G C +M++AL + EMV G P++ Y+ + G
Sbjct: 378 VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 428
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 5/243 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV T+++LM + G + ++ M + G EPD +Y L+ C+E R+ E+E
Sbjct: 275 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESE 334
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL++ M V+ D++ YNT+I G C G+M A + M GV+ VT+ L+NGY
Sbjct: 335 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 394
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR +D A+ ++ +M G P T +++ L RR A + L + K G
Sbjct: 395 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE-LYVSITKSGTQLE 453
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y ++ GLC+ +EAL++ + + ++ I +K G ++ A K
Sbjct: 454 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEA----K 509
Query: 483 EMF 485
++F
Sbjct: 510 DLF 512
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 5/245 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ T+N+++ G+ G ++ +M G EP+ +YS LM C+ R EA
Sbjct: 240 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 299
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+++ M + +E D+ Y T++ G C+ G + +E+ F M GV+ +T+ L++G
Sbjct: 300 KIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGC 359
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C AG +D A + M G +P+ T LI C R+ +AL + K +V G+ P
Sbjct: 360 CLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFK-EMVSSGVSPN 418
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +++GL + A ++ + G + L Y+ + G K + A LR
Sbjct: 419 IITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA--LR- 475
Query: 483 EMFEN 487
MF+N
Sbjct: 476 -MFQN 479
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 114/237 (48%), Gaps = 1/237 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ V+P++ T+N L+ G G ++ + M +G +PD +Y L+ +C RM +
Sbjct: 343 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 402
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L++EM V +++ YN I+ G A A+E + + SG + T+ +++
Sbjct: 403 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILH 462
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ D A+ ++ ++C + E T ++IG L R+ EA D+ A GL
Sbjct: 463 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSAN-GLV 521
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P ++Y + + L E+G +EE + M G + ++ + ++ G++ A
Sbjct: 522 PDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 578
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
VA ++ MARA G V + T+ L+ CRAG +D +
Sbjct: 65 VARHSPAAAVSRYNRMARA-------GAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGN 117
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
+ +KGF + T L+ LC +R +A+DI+ R+ + G P SY L+KGLC+E
Sbjct: 118 VVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDEN 177
Query: 438 KMEEALKV---QAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ +EAL++ A+ G G P + Y+ ++G+ KEG
Sbjct: 178 RSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 6/249 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
RV P TFN + GF + G E+V++V+ M G Y +L++ C+ EA
Sbjct: 5 RVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEA 64
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KL MR K + +AY+TII C++ + A E +M ++T+ +V
Sbjct: 65 YKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVER 123
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ +D A+ +M +G +P+ ++ LC + +V EA +L ++VK + P
Sbjct: 124 LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEA-RLLFEKMVKQRINP 182
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI GLC+ ++E A ++ EM GKG+ P+ Y+ IDG+ K+ ++ A
Sbjct: 183 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAA---- 238
Query: 482 KEMFENQVR 490
K++F+ VR
Sbjct: 239 KDVFDKMVR 247
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 118/217 (54%), Gaps = 1/217 (0%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EMA G +PD + Y+ +++ C+E ++ EA L+E+M + + +VV YNT+I G C+
Sbjct: 139 EMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAW 198
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A E F+EM G + V++ L++G+C+ D+ +A V++ M R P T
Sbjct: 199 RIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYT 258
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
LI L +V A ++L +VK G+ P +Y LI G C+ +++EA K+ +MV
Sbjct: 259 TLIDGLSKSGKVQAAAEVLDG-MVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVT 317
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+G P++ Y+ ++ + +E A L + M + +
Sbjct: 318 QGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 354
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 121/243 (49%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ PNV T+N L+ G + E +++ EMA G P SY+ L+ FC+++ + A
Sbjct: 179 RINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAA 238
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ ++++M N +VV Y T+I G + G++ A E M GV + T+ L++G
Sbjct: 239 KDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDG 298
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C+ VD A + M +G P T +L+ LC ++ +A + + + + P
Sbjct: 299 FCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRG-MAQRRCHP 357
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
T +Y L++ LC +++ A ++ AEM+ KG P Y G + G V A L
Sbjct: 358 TVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELM 417
Query: 482 KEM 484
++M
Sbjct: 418 EKM 420
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 124/243 (51%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ +N ++ G +E E+ ++ +M + P+ +Y+ L+ C+ R+ A
Sbjct: 145 IKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAY 204
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L++EM K V+YNT+I GFC+ ++ A++ F +M S + VT+ L++G
Sbjct: 205 ELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGL 264
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
++G V +A V + M +KG P +T LI C RRV EA +L+ V + G+ PT
Sbjct: 265 SKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQ-GIAPT 323
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ LC K+E+A K+ M + P++ Y+ + ++ A L
Sbjct: 324 VVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYA 383
Query: 483 EMF 485
EM
Sbjct: 384 EMI 386
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 124/246 (50%), Gaps = 2/246 (0%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
R+ R + ++ ++ + E+ ++ +MAR PD +Y ++ C+ +R+
Sbjct: 72 RLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRI 130
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
+A EEM + ++ D YN ++ G C+ ++ A F +M + + VT+ L
Sbjct: 131 DDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTL 190
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+NG C+A +++A ++ +M KG+ P + LI C K+ + A D+ ++V+
Sbjct: 191 INGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFD-KMVRSN 249
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
P +Y LI GL + GK++ A +V MV KG P++ YS IDG+ K V+ A
Sbjct: 250 CVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAH 309
Query: 479 MLRKEM 484
L ++M
Sbjct: 310 KLLEQM 315
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 165/365 (45%), Gaps = 38/365 (10%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALR--SPENDPKLKLFEVLVKTYR------- 152
K +Y+TII+ L + + AR++I R P+ + E L KT R
Sbjct: 77 KRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKTKRIDDALAT 136
Query: 153 -----ECGSAP--FVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
G P F+++ ++ C E EK+E + ++ + ++ V T N LI
Sbjct: 137 VEEMATRGIKPDAFIYNFVLSGLCQE----EKVEEARLLFEKMVKQRINPNVVTYNTLIN 192
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ + + + YE+++E+ AG G P ++N L+ GF ++
Sbjct: 193 GLCKAWRIETAYELFKEM--------AGKG--------YVPTEVSYNTLIDGFCKKKDLV 236
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
+DV+ +M R C P+ +Y+ L+ + +++ A ++ + M K V +V Y+ +I
Sbjct: 237 AAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLI 296
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
GFC++ + A + +M G+ + VT+ L+N CRA ++ A ++ M ++
Sbjct: 297 DGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCH 356
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P T L+ LC ++ + L A ++ G P +Y L GL GK+ EA +
Sbjct: 357 PTVVTYNTLLRALCHHKQ-LDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQE 415
Query: 445 VQAEM 449
+ +M
Sbjct: 416 LMEKM 420
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 100/240 (41%), Gaps = 37/240 (15%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
SY T+I + + + A+DV +RS P + + L+ + G
Sbjct: 221 SYNTLIDGFCKKKDLVAAKDVFDKMVRS-NCVPNVVTYTTLIDGLSKSG----------- 268
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
K++ +++ ++ +G++ V+T + LI + + V +++ L+
Sbjct: 269 ---------KVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKL------LE 313
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
T GI P V T+N L+ R E ++ MA+ C P +Y+
Sbjct: 314 QMVTQGIA----------PTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYN 363
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L+ C +++ A +L+ EM K D + Y+T+ G G++ A+E +M L+
Sbjct: 364 TLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLT 423
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 37/182 (20%)
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M L V + TF + +G+ +AG ++ VY M G+ S +LI LC
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 403 VFEALDIL--------KARVVKFGLF-------------------------PTEKSYMFL 429
EA +L K + + + P +Y +
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPI 120
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ LC+ ++++AL EM +G +P IY+ + G +E VE A +L FE V
Sbjct: 121 VERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL----FEKMV 176
Query: 490 RQ 491
+Q
Sbjct: 177 KQ 178
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 176/416 (42%), Gaps = 93/416 (22%)
Query: 124 ARDVIRVAL--RSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCV 181
AR +IR L +SP + P L+ + + P D+L+ C E K + +
Sbjct: 79 ARRLIRSMLLPKSPFSSPS-HLYTLF--SLSSTPMKPLFSDMLLSICSESKMVSE---SA 132
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
++ ++ G+ V++ N + + K +++ E+ +G+
Sbjct: 133 ELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEI------VESGL-------- 178
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
RP+ + + + G ++ ++ M R G P + Y+V++ C+E+RM++A
Sbjct: 179 --RPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDA 236
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
EKL++EM D+ V + + YNT+I G+C++G++ A M + VE + +TF L+NG
Sbjct: 237 EKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNG 296
Query: 362 YCRA-----------------------------------GDVDSAILVYNDMCRKGFEPE 386
CRA G+VD++I + + RKG +
Sbjct: 297 LCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQIL 356
Query: 387 GSTIEVLIGELCDKRRVFEALDILKA---------------------------------- 412
T +L+ LC + + +A ++LK
Sbjct: 357 DYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIE 416
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
++ GL P +Y L+K CE MEEA K +MV KG P++E Y+ IDGY
Sbjct: 417 KMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGY 472
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 166/351 (47%), Gaps = 24/351 (6%)
Query: 145 EVLVKTYRECGSAPF--VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
E ++K + E G AP F+ ++ +V +I K T ++ + + GL T N+L
Sbjct: 377 EEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAV---GLRPNHVTYNSL 433
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
+ + K + +A I K V++ V PNV T+N L+ G+ R
Sbjct: 434 VKKFCEMKNM--------------EEAEKCIKKMVEK--GVLPNVETYNTLIDGYGRSCL 477
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
F++ + EM + G +P+ SY L+ C++ + EAE + +M + V + YN
Sbjct: 478 FDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNM 537
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I G C G++ A FF EM + + VT+ L+NG C+ G V A + +++ RKG
Sbjct: 538 LIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKG 597
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+ T LI V +AL++ + + K G+ PT +Y LI G +EG +
Sbjct: 598 LSFDVITYNSLISGYSSAGNVQKALELYET-MKKSGIKPTLNTYHRLIAGCGKEG-LVLV 655
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
K+ EM+ P IY+A I Y++ G+V+ A L M E Q Q D
Sbjct: 656 EKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAM-EAQGIQPD 705
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 118/237 (49%), Gaps = 1/237 (0%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
+T + L+ +EG EK E+V + G P ++ ++ +C+ + +A E+
Sbjct: 358 YTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEK 417
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M + + V YN+++ FCE+ M AE+ ++M GV + T+ L++GY R+
Sbjct: 418 MEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCL 477
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
D + +M +KG +P + LI LC + EA +++ +V G+ P + Y
Sbjct: 478 FDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEA-EVILGDMVHRGVVPNAQIYN 536
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LI G C GK+++A + EMV + P+L Y+ I+G K+G V A L E+
Sbjct: 537 MLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEI 593
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 161/361 (44%), Gaps = 52/361 (14%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
++ L+K E+KN+E+ E C+ + ++ +G+ V T N LI R ++I
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCI---KKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQIL 485
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
E+ G+ +PNV ++ L+ ++ + E + +M G
Sbjct: 486 EEM------EKKGL----------KPNVISYGCLINCLCKDANILEAEVILGDMVHRGVV 529
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P+ Y++L+ C ++++A + ++EM + + +V YN +I G C+ G++ AE
Sbjct: 530 PNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENL 589
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG---- 395
E+ G+ +T+ L++GY AG+V A+ +Y M + G +P +T LI
Sbjct: 590 ASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGK 649
Query: 396 ----------------ELCDKRRVFEAL--------DILKA-----RVVKFGLFPTEKSY 426
L R ++ AL D+ KA + G+ P + +Y
Sbjct: 650 EGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTY 709
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI G +EG+M + + +M +G P E Y I G+ K + + A + +EMFE
Sbjct: 710 NCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFE 769
Query: 487 N 487
N
Sbjct: 770 N 770
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 42/289 (14%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY------------- 285
+V V P + TFN+L+ G R E+ + V EM G PD ++Y
Sbjct: 279 KVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNV 338
Query: 286 ----------------------SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
S+L+ C+E M +AE++ ++ + + V +NTI
Sbjct: 339 DASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTI 398
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
+ G+C++G++ +A +M G+ + VT+ LV +C +++ A M KG
Sbjct: 399 VNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGV 458
Query: 384 EPEGSTIEVLI---GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
P T LI G C R F+ L+ ++ + GL P SY LI LC++ +
Sbjct: 459 LPNVETYNTLIDGYGRSCLFDRCFQILEEMEKK----GLKPNVISYGCLINCLCKDANIL 514
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EA + +MV +G P+ +IY+ IDG G ++ A EM ++
Sbjct: 515 EAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREI 563
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 120/256 (46%), Gaps = 22/256 (8%)
Query: 152 RECGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
RE +++LI C + K +E +I R +GLS V T N+LI S
Sbjct: 561 REIVPTLVTYNILINGLCKKGKVMEAENLASEITR----KGLSFDVITYNSLISGYSSAG 616
Query: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
V E+Y ++ +GI +P ++T++ L+ G +EG VE ++
Sbjct: 617 NVQKALELY------ETMKKSGI----------KPTLNTYHRLIAGCGKEGLV-LVEKIY 659
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
EM ++ PD Y+ L+ + E +++A L M + ++ D + YN +I G +
Sbjct: 660 QEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKE 719
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G M + + +M + G+ + T++ L+ G+C+ D D A + Y +M GF P S
Sbjct: 720 GRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSIC 779
Query: 391 EVLIGELCDKRRVFEA 406
+ LI L ++ R +A
Sbjct: 780 DNLITGLREEGRSHDA 795
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 36/251 (14%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V + N + +E ++ E+ G PD + Y + + ++ A
Sbjct: 143 VLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAI 202
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L M+ V V YN +IGG C+ M AE+ F EM V + +T+ L++GY
Sbjct: 203 ELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGY 262
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ +G+L EA +I + R+ + PT
Sbjct: 263 CK-----------------------------VGQL------EEAFNI-RERMKVENVEPT 286
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ L+ GLC MEEA +V EM GF P Y+ DG++K GNV+ + L +
Sbjct: 287 IITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSE 346
Query: 483 EMFENQVRQED 493
E V+ D
Sbjct: 347 EAVRKGVQILD 357
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 105/208 (50%), Gaps = 2/208 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V T+N+L+ G+ G +K +++ M + G +P +Y L+A C + + EK++
Sbjct: 601 DVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIA-GCGKEGLVLVEKIY 659
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM N+ D V YN +I + E G++ +A M G++ +T+ L+ G+ +
Sbjct: 660 QEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKE 719
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G + + NDM +G P+ T ++LI C K + F+ + + + G P+
Sbjct: 720 GRMHKVKNLVNDMKIRGLIPKTETYDILIVGHC-KLKDFDGAYVWYREMFENGFTPSVSI 778
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKG 453
LI GL EEG+ +A + +EM KG
Sbjct: 779 CDNLITGLREEGRSHDADVICSEMNMKG 806
>gi|356507117|ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61400-like [Glycine max]
Length = 498
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 163/352 (46%), Gaps = 27/352 (7%)
Query: 140 KLKLFEVLVKTYRECGSAPF-----VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSV 194
K ++F+ L + Y + S F + +L+ CC + + D ++ RG+
Sbjct: 16 KTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQKVFD---EMLERGIEP 72
Query: 195 KVSTCNAL-----IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVR----- 244
V + ++ R GV++ +Y +D + G DVKRV +
Sbjct: 73 NVVIYGQMGEAEGVFGRMRESGVVTP-NLYTYKTLMDGYSMMG---DVKRVFYLYCDMLK 128
Query: 245 ----PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
P+V TF L+ + G + + + MA+ P+ ++Y+ L+ +C+ + E
Sbjct: 129 PGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSLIHGYCKAGDLLE 188
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L EM + DVV YN +I G C+I + A +M V ++SV F +++
Sbjct: 189 AMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEKMDEVEVFANSVXFNVVID 248
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ GD++ AI V + M + EP T +LI C+K V A+ + V+K G+
Sbjct: 249 GCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLYTEMVIK-GIV 307
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
P +Y LI G C+ G +EA ++ EM+ G P++ S IDG +K+G
Sbjct: 308 PDVVTYTALIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDG 359
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 135/262 (51%), Gaps = 15/262 (5%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWV--EMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V PN H +N+L+ G+ + G + +E +W+ EM R G D +Y++L+ C+ R+ E
Sbjct: 166 VVPNGHAYNSLIHGYCKAG--DLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEE 223
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L E+M + V + V +N +I G C+IG+M +A E +M +E + +TF L++
Sbjct: 224 AMGLMEKMDEVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILID 283
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G+C G+V +A+ +Y +M KG P+ T LI C EA + K ++ GL
Sbjct: 284 GFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHK-EMLDAGLS 342
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF----------EPSLEIYSAFIDGYMK 470
P + +I GL ++G+ +A+K+ E G G+ P+ +Y+ I G +
Sbjct: 343 PNMFTVSCVIDGLLKDGRTNDAIKMFLEKTGAGYPGDKMDSRFCSPNSMMYAILIQGLCE 402
Query: 471 EGNVEMATMLRKEMFENQVRQE 492
+G + AT EM N + +
Sbjct: 403 DGXIFKATKFFAEMKWNGFKPD 424
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 119/246 (48%), Gaps = 12/246 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + NAL+ G + F+ + +V+V+M P +Y +LM C + A+K+
Sbjct: 2 PTLQPCNALLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQKV 61
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV-TFEHLVNGYC 363
++EM ++ +E +VV Y G+M AE F M SGV + ++ T++ L++GY
Sbjct: 62 FDEMLERGIEPNVVIY----------GQMGEAEGVFGRMRESGVVTPNLYTYKTLMDGYS 111
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
GDV +Y DM + G P+ T LI ++ K +A A + KF + P
Sbjct: 112 MMGDVKRVFYLYCDMLKPGLYPDVVTFATLI-DVLRKMGDLKAAXNCFAYMAKFDVVPNG 170
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI G C+ G + EA+ ++ EM G + Y+ I G +E A L ++
Sbjct: 171 HAYNSLIHGYCKAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEK 230
Query: 484 MFENQV 489
M E +V
Sbjct: 231 MDEVEV 236
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 26/252 (10%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V V N FN ++ G + G EK +V +M EP+ ++S+L+ FC + +R
Sbjct: 234 VEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRA 293
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L+ EM K + DVV Y +I G C++G A +EM +G+ + T +++
Sbjct: 294 AMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVID 353
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G + G + AI ++ + G+ G+ D R
Sbjct: 354 GLLKDGRTNDAIKMFLEKTGAGYP----------GDKMDSRFC----------------S 387
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P Y LI+GLCE+G + +A K AEM GF+P + +Y + + + ++ ML
Sbjct: 388 PNSMMYAILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAHFQSKHMIDVMML 447
Query: 481 RKEMFENQVRQE 492
+M + V Q
Sbjct: 448 HADMVKMGVIQN 459
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 117/219 (53%), Gaps = 1/219 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV T+N+L+ GF G + ++ M GC PD +Y+ L+ FC+ +R+ +
Sbjct: 810 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 869
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL+ EM + + D YNT+I G+C+ G++ A++ F M GV VT+ L++
Sbjct: 870 KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 929
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G ++ A+++ D+ + + + T ++I LC ++ EA + ++ K G+ P
Sbjct: 930 CNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK-GVKPD 988
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+Y+ +I GLC +G EA K+ M GF PS IY
Sbjct: 989 AIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 1027
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 135/261 (51%), Gaps = 3/261 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
+DA + VKR ++ PNV F AL+ F +EG + +++ EM R P+ ++Y+
Sbjct: 761 TDAARLLRDMVKR--KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYN 818
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L+ FC + +A+ +++ M K DVV YNT+I GFC+ + + F EM
Sbjct: 819 SLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 878
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+ + T+ L++GYC+AG ++ A V+N M G P+ T +L+ LC+ ++ +A
Sbjct: 879 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 938
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L ++ + K + +Y +I+GLC K++EA + + KG +P Y I
Sbjct: 939 L-VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 997
Query: 467 GYMKEGNVEMATMLRKEMFEN 487
G ++G A L + M E+
Sbjct: 998 GLCRKGLQREADKLCRRMKED 1018
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 186/438 (42%), Gaps = 73/438 (16%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
+L Y T+I+ + L G + D L F +L+ + C F +
Sbjct: 83 NLRRYETVIYFSQKMELYGISHD--------------LYSFTILIHCFCRCSRLSFALSV 128
Query: 164 LIKC-------------------CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
L K CL + +I +V +++ G V N LI
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCL----VNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 205 EVSRGKGVISGYEIYREV--FGLDSDAT-----------AGIGKDVKRVVR------VRP 245
+ + + E+ E+ GL +D +G D R++R + P
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V TF AL+ F ++G ++ ++++ EM + +P+ +Y+ ++ C R+ +A+K +
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M K +VV YNT+I GFC+ + + F+ M G + T+ L++GYC+
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF-GLFPTEK 424
G + A+ ++ M + P+ T +L+ LC + AL VKF + +EK
Sbjct: 365 GKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL-------VKFDDMRESEK 417
Query: 425 -----SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
+Y +I GLC+ K+E+A ++ + +G +P Y+ I G K G A
Sbjct: 418 YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 477
Query: 480 LRKEMFEN----QVRQED 493
L + M E Q+ ED
Sbjct: 478 LIRRMKEEGIICQMNAED 495
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 112/240 (46%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV +N ++ G + +V+ M + G D +Y+ L++ R +A +L
Sbjct: 707 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 766
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M + ++ +V+ + +I F + G + A ++EM V + T+ L+NG+C
Sbjct: 767 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 826
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A +++ M KG P+ T LI C +RV + + + + GL
Sbjct: 827 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF-CEMTYQGLVGDAF 885
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C+ GK+ A KV MV G P + Y+ +D G +E A ++ +++
Sbjct: 886 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 945
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 119/250 (47%), Gaps = 1/250 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+R + T+N L+ G G + + +M + +P+ ++ L+ F +E + EA
Sbjct: 740 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 799
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++EM ++V +V YN++I GFC G + A+ F M G VT+ L+ G+
Sbjct: 800 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 859
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++ V+ + ++ +M +G + T LI C ++ A + R+V G+ P
Sbjct: 860 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN-RMVDCGVSPD 918
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ LC GK+E+AL + ++ + + Y+ I G + ++ A L +
Sbjct: 919 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 978
Query: 483 EMFENQVRQE 492
+ V+ +
Sbjct: 979 SLTRKGVKPD 988
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 113/240 (47%), Gaps = 7/240 (2%)
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
L GF FE ++ EM P ++ L+ RR ++M
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC---RAGDVD 369
+ HD+ ++ +I FC ++ A +M G E S VTF L++G+C R GD
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
S +++ M + G+EP LI LC + AL++L + K GL +Y L
Sbjct: 162 SLVIL---MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLN-EMEKKGLGADVVTYNTL 217
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ GLC G+ +A ++ +M+ + P + ++A ID ++K+GN++ A L KEM ++ V
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 111/230 (48%), Gaps = 1/230 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ F L+ +E V +M G D YS+++L+ FC R+ A +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M E +V + +++ GFC + + A M SG E + V + L++G C+
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+++ A+ + N+M +KG + T L+ LC R +A +L+ ++K + P
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRD-MMKRSINPDVV 247
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
++ LI ++G ++EA ++ EM+ +P+ Y++ I+G G +
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 1/227 (0%)
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
F+ ++ EM + P ++ ++ V + + L+ +M + + HD+ ++
Sbjct: 585 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 644
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I FC ++ A +M G S VT L+NG+C+ A+ + + M G
Sbjct: 645 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 704
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
F P +I LC R + AL++ + K G+ +Y LI GL G+ +A
Sbjct: 705 FVPNVVIYNTVINGLCKNRDLNNALEVFYC-MEKKGIRADAVTYNTLISGLSNSGRWTDA 763
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ +MV + +P++ ++A ID ++KEGN+ A L KEM V
Sbjct: 764 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 810
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 36/275 (13%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV------------- 291
P++ F ++ + F+ V ++ +M LG D YS+++L+
Sbjct: 602 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661
Query: 292 ----------------------FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
FC+ R +EA L + M +VV YNT+I G C+
Sbjct: 662 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
++ A E F M G+ + +VT+ L++G +G A + DM ++ +P
Sbjct: 722 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
LI + + EA ++ K +++ + P +Y LI G C G + +A + M
Sbjct: 782 FTALIDTFVKEGNLLEARNLYK-EMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 840
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
V KG P + Y+ I G+ K VE L EM
Sbjct: 841 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 875
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 161/370 (43%), Gaps = 47/370 (12%)
Query: 42 IATVVSLLTHHRSKSRWNHLLSLCRS----GLTPTQ--FSQIALGLKNNPHL--ALRFFS 93
I T+ SLL +R+ +SL S G P ++ + GL N L AL F
Sbjct: 674 IVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 733
Query: 94 FTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRE 153
+ K + + +Y T+I LS + A ++R ++ + DP + F L+ T+ +
Sbjct: 734 CMEKKGI-RADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIFFTALIDTFVK 791
Query: 154 CGS---APFVFDLLIKCCLEVKNIEKIETCVD-------------IVRMLMSRGLSVKVS 197
G+ A ++ +I+ + V N+ + ++ + +++S+G V
Sbjct: 792 EGNLLEARNLYKEMIRRSV-VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 850
Query: 198 TCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRVRPNVHTFNALMV 255
T N LI + K V G +++ E+ GL DA T+N L+
Sbjct: 851 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA------------------FTYNTLIH 892
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G+ + G + V+ M G PD +Y++L+ C ++ +A + E+++ ++
Sbjct: 893 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 952
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
D++ YN II G C ++ A FR + GV+ ++ + +++G CR G A +
Sbjct: 953 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 1012
Query: 376 NDMCRKGFEP 385
M GF P
Sbjct: 1013 RRMKEDGFMP 1022
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 125/239 (52%), Gaps = 1/239 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV +N ++ Y+ G K +D EM+ CEPD +Y+ L+ FC + EAEKL
Sbjct: 312 NVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLL 371
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E+ + + + + Y ++ G+C+ GE +A ++ EM SG+E +++ L++G A
Sbjct: 372 EQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVA 431
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G+VD+A+ + + M +G P+ + VL+ L K ++ A ++ ++ + P
Sbjct: 432 GEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMA-KVMLTEMLDQNIAPDAFV 490
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y L+ G G ++EA K+ ++ KG +P + Y+ I G+ K G ++ A + +M
Sbjct: 491 YATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKM 549
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/488 (22%), Positives = 201/488 (41%), Gaps = 32/488 (6%)
Query: 15 KPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLS--LCRSGLTPT 72
KPK P S P + L+ + +L H +W L S +
Sbjct: 16 KPKSSPPF--------SIPFRGEIKRLVNDTIQILKSHE---KWEQSLQTHFTESDIPII 64
Query: 73 QFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARL-IGPARDVIRVA 131
+ L N+ L L+FF + SL SL+ + + +R + P +
Sbjct: 65 DVTHFVLDRINDVELGLKFFDWASKNSL-SGSLNGTSYSSLLKLLSRFRVFPEIEFTLEE 123
Query: 132 LRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRG 191
+++ E P + ++ Y + G ++ ++ C ++ +L+
Sbjct: 124 MKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHR 183
Query: 192 LSVKVSTCNALIWE-VSRGKG---VISGYEIYREVFGLDSDATAGIGKDVKRVVRVR--- 244
++ T + L E + R G + Y V GL G +D +++ R
Sbjct: 184 ---RIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGL---CLKGRIEDGIKLIESRWGK 237
Query: 245 ---PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
PN+ +N L+ G+ ++G E ++ ++ G P ++ L+ FC+
Sbjct: 238 GCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAI 297
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ L EM+D+ + +V YN II ++G +A++ +EM + E VT+ L+N
Sbjct: 298 DLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINH 357
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C G+V+ A + R+G P T L+ C + +A D L + GL
Sbjct: 358 FCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYL-IEMSTSGLEV 416
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
SY LI GL G+++ AL ++ M+ +G P IY+ ++G K+G + MA ++
Sbjct: 417 DMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVML 476
Query: 482 KEMFENQV 489
EM + +
Sbjct: 477 TEMLDQNI 484
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 186/414 (44%), Gaps = 51/414 (12%)
Query: 107 SYATIIHILSRA---------------RLIGPARDVIRVALRSPENDPKLKLFEVLVKTY 151
SY +IH L A R I P ++ V + KL + +V++
Sbjct: 420 SYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEM 479
Query: 152 RECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG 209
+ AP FV+ L+ + N+++ + + ++++ +GL V N +I S+
Sbjct: 480 LDQNIAPDAFVYATLVDGFIRHGNLDEAKK---LFQLIIEKGLDPGVVGYNVMIKGFSKS 536
Query: 210 KGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDV 269
G+ +A I K ++R V P++ TF+ ++ G+ ++ V +
Sbjct: 537 --------------GMMDNAILCIDK-MRRAHHV-PDIFTFSTIIDGYVKQHNMNAVLKI 580
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+ M + C+P+ +Y+ L+ +C + + AEKL+ MR ++ VV Y+ +IG FC+
Sbjct: 581 FGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCK 640
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV----------DSAILVYND-- 377
++ +A +F M ++ + F +LVNG+ +++ ++ D
Sbjct: 641 EAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFF 700
Query: 378 --MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
M G+ + + ++ LC +R V AL L+ +++ FGL S++ LI G+C
Sbjct: 701 SRMIGDGWTQKAAAYNCILICLCQQRMVKTALQ-LRNKMLAFGLCSDAVSFVALIHGICL 759
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EG +E + + + +G YS +D ++ EG + A+ + + M + V
Sbjct: 760 EGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYV 813
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 36/285 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE------------------------- 279
PN T+ L+ G+ ++G + K D +EM+ G E
Sbjct: 381 PNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTI 440
Query: 280 ----------PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
PD Y+VLM ++ ++ A+ + EM D+N+ D Y T++ GF
Sbjct: 441 RDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIR 500
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G + A++ F+ + G++ V + ++ G+ ++G +D+AIL + M R P+ T
Sbjct: 501 HGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFT 560
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
+I + + L I +VK P +Y LI G C +G+ + A K+ + M
Sbjct: 561 FSTIIDGYVKQHNMNAVLKIF-GLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMM 619
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
G +PS+ YS I + KE + A + M N+ D
Sbjct: 620 RSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDA 664
>gi|326487712|dbj|BAK05528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 455
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 128/247 (51%), Gaps = 5/247 (2%)
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC---EPDCYSYSVLMAV 291
+D++ PN +N L+ + + G E V EM C P+ +YS L+
Sbjct: 188 RDLRNKYLPAPNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLLGG 247
Query: 292 FCEERRMREAEKLWEEMRDKN-VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C +M+EA +L+E M +K+ + D + YN II GFC +G++ +A F M + E
Sbjct: 248 LCRAGKMKEAFELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEP 307
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
++ + L+NG+C+ GDV++A LV+ +M G EP+ + LIG LC V E +D++
Sbjct: 308 NAFNYATLINGHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIGCLCRHGSVDEGIDLV 367
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
K G +Y L++GLC++G+M E + + + +G + ++ Y ++
Sbjct: 368 MEMREK-GCKADVVTYNLLLEGLCKDGRMAEVMDLLGRLPEEGVQLNVASYRIVMNTLCS 426
Query: 471 EGNVEMA 477
G++E A
Sbjct: 427 SGDMEKA 433
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 136/326 (41%), Gaps = 72/326 (22%)
Query: 118 ARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKI 177
A LI RD+ L +P ++ +L+K Y + G + F +L + +
Sbjct: 181 ADLIADLRDLRNKYLPAPNT----CVYNILIKHYVKNGDSETAFRVL--------DEMRE 228
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
TC D+ L+ T + L+ + R + +E++ + I KD
Sbjct: 229 YTCGDVRPNLV---------TYSTLLGGLCRAGKMKEAFELFEGM----------IEKD- 268
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
+ P+ T+N ++ GF R G EK ++ M + CEP+ ++Y+ L+ C++
Sbjct: 269 ----HIVPDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLINGHCKKGD 324
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A+ ++EEMR VE D V+Y +IG C G + + EM G ++ VT+
Sbjct: 325 VENAKLVFEEMRSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTYNL 384
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L+ G C+ G R+ E +D+L R+ +
Sbjct: 385 LLEGLCKDG-----------------------------------RMAEVMDLL-GRLPEE 408
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEAL 443
G+ SY ++ LC G ME+A+
Sbjct: 409 GVQLNVASYRIVMNTLCSSGDMEKAV 434
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 40/217 (18%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRD---KNVEHDVVAYNTIIGGFCEIGEMARA 336
P+ Y++L+ + + A ++ +EMR+ +V ++V Y+T++GG C G+M A
Sbjct: 198 PNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEA 257
Query: 337 EEFFREM-GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
E F M + +T+ +++G+CR G V+ A ++ M + EP
Sbjct: 258 FELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEPNAF------- 310
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
+Y LI G C++G +E A V EM G E
Sbjct: 311 -----------------------------NYATLINGHCKKGDVENAKLVFEEMRSAGVE 341
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
P Y+A I + G+V+ L EM E + +
Sbjct: 342 PDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKAD 378
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 142/317 (44%), Gaps = 69/317 (21%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TFN L+VG R G ++ +V M++ PD ++Y+V+++ FC++ R+ EA +L
Sbjct: 265 PNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRL 324
Query: 305 WEEMRDKNVEHDVVAYNTIIGG-----------------------------------FCE 329
EEM + + DVV YNT+I G F +
Sbjct: 325 REEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVK 384
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G+M ++ R+M SG VT+ L++ +C+ G +D A + ++M RKG + + T
Sbjct: 385 KGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVT 444
Query: 390 IEVLIGELCDKRRVFEALDIL-KAR------------VVKFGLFPTEK------------ 424
+ ++ LC +R++ EA D+L AR + G F EK
Sbjct: 445 LNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMK 504
Query: 425 ---------SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+Y +I GLC+ GK +A+ E++ G P Y+ I GY +EG VE
Sbjct: 505 EKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVE 564
Query: 476 MATMLRKEMFENQVRQE 492
A +M E + +
Sbjct: 565 KAFQFHNKMVEKNFKPD 581
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+++ P+V T+N L+ G + G+ E+ + EM G +P+ +Y+V++ F ++ +M E
Sbjct: 331 LKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDE 390
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+K +M + D+V YNT+I C++G+M A EMG G++ VT ++
Sbjct: 391 VDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLR 450
Query: 361 GYCRAGDVD-----------------------------------SAILVYNDMCRKGFEP 385
CR +D A+ ++++M K P
Sbjct: 451 ALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIP 510
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
T +I LC + +A+D L +++ GL P E +Y +I G C+EG++E+A +
Sbjct: 511 SIITYNSMIAGLCQMGKTNQAIDKLD-ELLESGLVPDEITYNTIIHGYCQEGQVEKAFQF 569
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+MV K F+P + + + G KEG +E A L
Sbjct: 570 HNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKL 604
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 114/229 (49%), Gaps = 1/229 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T N ++ RE ++ D+ R G D SY L+ + + + +A +LW+EM
Sbjct: 444 TLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEM 503
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
++K + ++ YN++I G C++G+ +A + E+ SG+ +T+ +++GYC+ G V
Sbjct: 504 KEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQV 563
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A +N M K F+P+ T L+ LC + + +AL + + K G SY
Sbjct: 564 EKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISK-GKDVDAVSYNT 622
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+I LC+E + EA + EM K P Y+A + G G ++ A
Sbjct: 623 IILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDA 671
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 4/248 (1%)
Query: 243 VRPNVHTFNALM---VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
++P + T N L+ V F + + V+ + ++G + + S+++L+ C E R
Sbjct: 155 MQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFG 214
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
EA ++ +MRD D + YNTI+ G C+ G + A + +M G+ + TF LV
Sbjct: 215 EAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILV 274
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
G CR G + A V M + P+ T V+I C + R+ EA+ L+ + L
Sbjct: 275 VGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMR-LREEMENLKL 333
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI G E G EE K+ EM G+G +P+ Y+ + ++K+G ++
Sbjct: 334 SPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDK 393
Query: 480 LRKEMFEN 487
++M E+
Sbjct: 394 TVRKMEES 401
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 121/256 (47%), Gaps = 7/256 (2%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ V+ N ++FN L+ G E F + V +M GC PD +Y+ ++ C++ R+ E
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L +M++K + + +N ++ G C +G + A M + V + T+ +++
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG---ELCDKRRVFEALDILKARVVKF 417
G+C+ G + A+ + +M P+ T LI E F+ ++ ++ R
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGR---- 366
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G+ P +Y ++K ++GKM+E K +M G P + Y+ I + K G ++ A
Sbjct: 367 GMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEA 426
Query: 478 TMLRKEMFENQVRQED 493
L EM ++ +D
Sbjct: 427 FRLMDEMGRKGLKMDD 442
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 82/162 (50%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+N+++ G + G + D E+ G PD +Y+ ++ +C+E ++ +A +
Sbjct: 510 PSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQF 569
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M +KN + DVV NT++ G C+ G + +A + F G + +V++ ++ C+
Sbjct: 570 HNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCK 629
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
A + +M K P+ T ++G L D R+ +A
Sbjct: 630 EKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDA 671
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+V T N L+ G +EG EK ++ G + D SY+ ++ C+E+R EA
Sbjct: 579 KPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFD 638
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L EEM +K + D YN I+GG + G M AEEF ++ G
Sbjct: 639 LLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG 682
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N ++ G+ +EG EK +M +PD + + L+ C+E + +A KL
Sbjct: 545 PDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKL 604
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ K + D V+YNTII C+ A + EM + T+ ++ G
Sbjct: 605 FNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTD 664
Query: 365 AGDVDSAILVYNDMCRKG 382
AG + A + + KG
Sbjct: 665 AGRMKDAEEFISKIAEKG 682
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 124/242 (51%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN+ T++ L+VG + GA EK + + EM+ G P ++ ++ + RR
Sbjct: 625 IKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLIL 684
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ E M + + D+ YNT++ C G +A EM G+ ++TF L+ G+
Sbjct: 685 EIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGH 744
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
++G +D+A Y+ M G P +T L+G L R+ E+ D++ + K G+ P+
Sbjct: 745 FKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGES-DMVLNEMKKRGIEPS 803
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G ++ EA+++ EMVGKGF P + Y+A I + K G + A L
Sbjct: 804 NLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFN 863
Query: 483 EM 484
EM
Sbjct: 864 EM 865
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 120/244 (49%), Gaps = 4/244 (1%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGC--EPDCYSYSVLMAVFCEERRMREAEKLWE 306
T N ++VG R+G ++ + M R G D ++ L+ +C+ M A + E
Sbjct: 139 TVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAE 198
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M+ + V DVV YN+++ G C GE+ A + M GVE + VT+ + YCR
Sbjct: 199 RMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRN 258
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
VD A +Y +M RKG P+ T+ L+G LC R EA + + + K G P +Y
Sbjct: 259 AVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFR-EMEKIGAAPNHVTY 317
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA-TMLRKEMF 485
LI L + + E+L + E+V +G L +Y+A +D KEG ++ A M R +
Sbjct: 318 CMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALS 377
Query: 486 ENQV 489
+N
Sbjct: 378 DNHT 381
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 148/314 (47%), Gaps = 17/314 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ D+V + G+ V T I E R V + +Y E+
Sbjct: 224 EVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEM------------- 270
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
V++ V P+V T +AL+ G ++G F + ++ EM ++G P+ +Y +L+ +
Sbjct: 271 -VRK--GVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKA 327
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+R E+ L E+ + V D++ Y ++ C+ G++ A++ FR + VT+
Sbjct: 328 QRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTY 387
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++ C+AG+VD A V ++M K P T +I L + V +A D ++ +
Sbjct: 388 TVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMR-EMK 446
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ G+ P +Y +I G + E AL V EM+ +G E + I + ++G K G +E
Sbjct: 447 ERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIE 506
Query: 476 MATMLRKEMFENQV 489
A L +EM E V
Sbjct: 507 KAEALFREMNERGV 520
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 167/429 (38%), Gaps = 70/429 (16%)
Query: 108 YATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKC 167
Y ++ L + I A+D+ R AL S + P + VL+ + G+ +L +
Sbjct: 352 YTALMDWLCKEGKIDEAKDMFRHAL-SDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSE- 409
Query: 168 CLEVKNIEK-----------------IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
+E K+I + D +R + RG+ V T +I +
Sbjct: 410 -MEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCL 468
Query: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270
G + ++Y E+ V N ++L+ G + G EK E ++
Sbjct: 469 GQEAALDVYHEML----------------CEGVEVNKFIVDSLVNGLKKNGKIEKAEALF 512
Query: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
EM G D +Y+ L+ + + A K+ +E+ +KN+ D V YN I C +
Sbjct: 513 REMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCML 572
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G+ AE F EM +G++ VT+ ++ R G A+ + N M R +P T
Sbjct: 573 GKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITY 632
Query: 391 EVLIGELCDK-------------------------RRVFEALD-------ILKAR--VVK 416
LI L + RRV +A IL+ ++
Sbjct: 633 STLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMN 692
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
GL Y L++ LC G +A+ V EM G+G P ++A I G+ K G+++
Sbjct: 693 AGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDN 752
Query: 477 ATMLRKEMF 485
A +M
Sbjct: 753 AFSTYDQML 761
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 8/208 (3%)
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR----A 336
D SY+V+M+ F E+ + E L EM + V D V NT++ G C G + R A
Sbjct: 102 DTVSYNVVMSGFSEQGGL-APEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
E R G+ G++ V + LV+GYC+ GD+++A V M +G + L+
Sbjct: 161 EVMVRGGGIGGLD--VVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAG 218
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC V A D++ + + G+ P +Y I C +++A + EMV KG P
Sbjct: 219 LCRAGEVDAARDMVDT-MKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLP 277
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ SA + G K+G A L +EM
Sbjct: 278 DVVTLSALVGGLCKDGRFSEAYALFREM 305
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ +N L+ G K V EM+ G PD +++ L+ + + A +
Sbjct: 698 DITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTY 757
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++M + +V +NT++GG G + ++ EM G+E S++T++ LV GY +
Sbjct: 758 DQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQ 817
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+ A+ +Y +M KGF P+ ST LI + + +A ++ + G+ PT +
Sbjct: 818 SNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFN-EMQNRGVLPTSCT 876
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y L+ G + E K +M KGF PS S+ + K G A L K ++
Sbjct: 877 YDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLY 936
Query: 486 E 486
+
Sbjct: 937 K 937
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV TFN L+ G G + + V EM + G EP +Y +L+ + ++ EA
Sbjct: 765 ISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAV 824
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ EM K V YN +I F ++G M++A+E F EM GV +S T++ LV+G+
Sbjct: 825 RLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGW 884
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+ + DM KGF P T+ + +EA +LK
Sbjct: 885 SKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLK 933
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 123/275 (44%), Gaps = 34/275 (12%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ ALM +EG ++ +D++ P+ +Y+VL+ C+ + AE++ EM
Sbjct: 352 YTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEME 411
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+K++ +VV +++II G + G + +A ++ REM G++ + VT+ +++G + +
Sbjct: 412 EKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQE 471
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA-------------LDILKARVVK 416
+A+ VY++M +G E ++ L+ L ++ +A LD + +
Sbjct: 472 AALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLI 531
Query: 417 FGLFPT--------------EKS-------YMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
GLF T EK+ Y I LC GK +EA EM G +
Sbjct: 532 DGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLK 591
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
P Y+ I +EG A L M + ++
Sbjct: 592 PDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIK 626
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 11/123 (8%)
Query: 232 GIGKDVKRVVRVR-----------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
G GK +V VR P V T+NAL+ F + G + ++++ EM G P
Sbjct: 813 GYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLP 872
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+Y +L++ + + R E K ++M++K ++I F + G A
Sbjct: 873 TSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLL 932
Query: 341 REM 343
+ +
Sbjct: 933 KNL 935
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 193/486 (39%), Gaps = 96/486 (19%)
Query: 87 LALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI--------------RVAL 132
LAL FF ++++ KH++ S T+IHIL + A D++ + L
Sbjct: 79 LALYFFRWSEYCMGSKHTVESVCTMIHILVSGNMNHKAMDLLLHLISYNSGEEGWHNIFL 138
Query: 133 RSPENDPKLKLFE----VLVKTY----------------RECGSAPF--VFDLLIKCCLE 170
+ E K ++ E +LV Y R P V + L+K LE
Sbjct: 139 KIHETHTKRRVLETVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLE 198
Query: 171 VKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSD 228
E++ D ++ + S+GL + S + I + +G+++ E+ G+ D
Sbjct: 199 S---EQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPD 255
Query: 229 ATA--------------------------------------------GIGK-----DVKR 239
A +GK DV
Sbjct: 256 VVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLE 315
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V + PN+ FN+ + +G K V+ +M +G PDC+SY+ +MA +C+ + +
Sbjct: 316 VFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDIS 375
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
A K +M + + V Y +I C+ G M AE F+ M G+ V++ L+
Sbjct: 376 NALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLM 435
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
NGY + G + A + + M G P+ T +LI L + V EA DIL + + G
Sbjct: 436 NGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILD-ELTRRGF 494
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY-----MKEGNV 474
P ++ +I G +G EEA + M EP + SA ++GY M E NV
Sbjct: 495 SPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANV 554
Query: 475 EMATML 480
ML
Sbjct: 555 LFHKML 560
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 7/271 (2%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
S+A +GK +KR +RP+V T+ L+ + G E E ++ M G PD SY+
Sbjct: 375 SNALKYLGKMLKR--GIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYN 432
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
LM + ++ +++A +L MR V D+V YN +I G + G + A++ E+
Sbjct: 433 TLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRR 492
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G VTF +++ G+ G+ + A L++ M EP+ T L+ C R + EA
Sbjct: 493 GFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEA 552
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
++L +++ GL Y LI G C G +++A + + M+ G P+ + A +
Sbjct: 553 -NVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVL 611
Query: 467 GYMK---EGNVEMATM-LRKEMFENQVRQED 493
GY K E VE A L++ + + ++ ED
Sbjct: 612 GYEKKCVENPVERAAFKLQQLLLKYGIQAED 642
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 4/246 (1%)
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
R + + P + N+L+ D EM G + S+ ++ +C + +
Sbjct: 178 RHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNI 237
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
KL EM+ ++ DVVAY +I C++ + A +M GV SV+ +
Sbjct: 238 DTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSV 297
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
V+GYC+ G + A+ V P I +LC + +A + + + + G
Sbjct: 298 VDGYCKVGKSEEAMDVLEVF---NLSPNIFVFNSFISKLCTDGNMLKAAKVFQ-DMCEMG 353
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
L P SY ++ G C+ + ALK +M+ +G PS+ Y+ ID K GN+EMA
Sbjct: 354 LIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAE 413
Query: 479 MLRKEM 484
L + M
Sbjct: 414 YLFQRM 419
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 121/262 (46%), Gaps = 22/262 (8%)
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
+ LLI C + N+E E + + +++ GL V + N L+ + + +E+
Sbjct: 396 YTLLIDSCCKPGNMEMAEY---LFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLS 452
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
+ R V P++ T+N L+ G + G + +D+ E+ R G P
Sbjct: 453 ----------------MMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSP 496
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D +++ ++ F + EA L+ M + ++E DVV + ++ G+C MA A F
Sbjct: 497 DVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLF 556
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI---GEL 397
+M +G+++ + + L++G+C G++D A + + M G P T L+ +
Sbjct: 557 HKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLGYEKK 616
Query: 398 CDKRRVFEALDILKARVVKFGL 419
C + V A L+ ++K+G+
Sbjct: 617 CVENPVERAAFKLQQLLLKYGI 638
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 99/202 (49%), Gaps = 4/202 (1%)
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y +L+ + +E + A KL +MR N+ + N+++ E ++ A +F +EM
Sbjct: 154 YGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMK 213
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G+ ++ ++GYC G++D+ + +M G +P+ ++I LC +
Sbjct: 214 SQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLK 273
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
EA IL ++ + G+F S ++ G C+ GK EEA+ V P++ ++++F
Sbjct: 274 EATSIL-FKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVF---NLSPNIFVFNSF 329
Query: 465 IDGYMKEGNVEMATMLRKEMFE 486
I +GN+ A + ++M E
Sbjct: 330 ISKLCTDGNMLKAAKVFQDMCE 351
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 127/239 (53%), Gaps = 4/239 (1%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
NV T+N L++ RE +K V+ EM C+PD +++++L+ C ++ +A KL
Sbjct: 6 NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M++ D YN +I G+ + + +A +F EM + + VT+ ++V+G C+A
Sbjct: 66 GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
A+ + ++M KG P T V++ LC++R++ EA +L+ V+ G FP +
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVR-GYFPDVVT 184
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y IKGLC+ +++EA K A M P + Y+ I+G K G+++ A+ + M
Sbjct: 185 YNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHM 240
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +NAL+ G+ + F + EM + C P +Y+ ++ C+ R R+A KL
Sbjct: 75 PDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKL 134
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG----------------- 347
+EMRDK ++ YN I+ G CE ++ A++ EM + G
Sbjct: 135 LDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCK 194
Query: 348 ---------------VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
V V++ ++NG C++GD+DSA + + M +G P+ T
Sbjct: 195 CDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSS 254
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
LI C V A+ +L + ++K G P +Y L+ L G + +A + EM +
Sbjct: 255 LIDGFCKGGEVERAMGLLDS-MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERR 313
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
GF P + Y+A IDG K V+ A + M E
Sbjct: 314 GFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVE 347
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 110/247 (44%), Gaps = 4/247 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ TF L+ G R EK + M +GC PD Y+ L++ + + + +A K
Sbjct: 39 QPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 98
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
EM + VV Y I+ G C+ A + EM G + T+ +V G C
Sbjct: 99 FLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLC 158
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+D A + +M +G+ P+ T I LC RV EA L + + P
Sbjct: 159 EERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFL----ARMPVTPDV 214
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
SY +I GLC+ G ++ A ++ M +G P + YS+ IDG+ K G VE A L
Sbjct: 215 VSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 274
Query: 484 MFENQVR 490
M + R
Sbjct: 275 MLKLGCR 281
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 144/316 (45%), Gaps = 29/316 (9%)
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVH 248
+RG + V T ++LI G G E+ R + LDS G RPN+
Sbjct: 242 NRGCTPDVVTYSSLI------DGFCKGGEVERAMGLLDSMLKLG----------CRPNMV 285
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+N+L+ +R G K ED+ VEM R G PD SY+ + C+ R+++A+ +++ M
Sbjct: 286 AYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRM 345
Query: 309 RDKNVEH----------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH- 357
++ D++ Y ++ G C+ G A F ++ + V F +
Sbjct: 346 VERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNV 405
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
+++ +C+ +D A+ ++ M K T +L+ LC R+ +A +L +V
Sbjct: 406 MLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLT-MVDE 463
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P +Y L+ +C+ GK AL++ E V G P + YSA I G + E E A
Sbjct: 464 GFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEA 523
Query: 478 TMLRKEMFENQVRQED 493
+L ++ E + +D
Sbjct: 524 YLLFTKLVERRWVPDD 539
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 27/247 (10%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V ++ ++ G + G + + M+ GC PD +YS L+ FC+ + A
Sbjct: 210 VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAM 269
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L + M ++VAYN+++G +G + +AE+ EM G V++ ++G
Sbjct: 270 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 329
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A V A V++ M +G P S+ +LI +DIL
Sbjct: 330 CKAERVKKAKAVFDRMVERGCTPNASSYSMLI------------VDIL------------ 365
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF-EPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y L+ GLC+ G+ +EA + ++++ + EP + Y+ +D + K ++ A +
Sbjct: 366 --LYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIH 423
Query: 482 KEMFENQ 488
K+M E
Sbjct: 424 KQMLEKN 430
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 1/202 (0%)
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
+G E + ++Y+ L+ E R +A +++EM DK+ + D + ++ G C ++ +
Sbjct: 1 MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A + M G + L++GY +A D A +M + P T ++
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
LC R +A+ +L K G P +Y +++GLCEE K++EA K+ EM +G+
Sbjct: 121 GLCKAERTRDAVKLLDEMRDK-GCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYF 179
Query: 456 PSLEIYSAFIDGYMKEGNVEMA 477
P + Y++FI G K V+ A
Sbjct: 180 PDVVTYNSFIKGLCKCDRVDEA 201
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 128/311 (41%), Gaps = 29/311 (9%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C+ ++ +Y +++ L R IG A D++ R + F V +Y C
Sbjct: 280 CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMER--------RGFTPDVVSYNAC------ 325
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR 220
D L K E+++ + ++ RG + S+ + LI ++ ++ G
Sbjct: 326 IDGLCK-------AERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGL---- 374
Query: 221 EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
G D + V P+V +N ++ + +K + +M C
Sbjct: 375 -CKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-C 432
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+ ++++L+ C + R+ +AE + M D+ D V Y T++ C+ G+ A A E F
Sbjct: 433 NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELF 492
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG--ELC 398
E G VT+ L+ G + A L++ + + + P+ T+ +L +L
Sbjct: 493 EEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLL 552
Query: 399 DKRRVFEALDI 409
+K R E +D+
Sbjct: 553 NKPRKAEVVDL 563
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G+E T L+ +L + R +A + + + K P ++ L++GLC ++E+
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDK-SCQPDAFTFAILLRGLCRSNQLEK 60
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
A K+ M G P IY+A I GY K + A EM +N
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH 107
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 129/245 (52%), Gaps = 10/245 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + TFN L+ G RE E + + +MA G + D +Y+ LM C+ R++EAE+L
Sbjct: 150 PTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQL 209
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M+ DVVAY++ + G C+ G++ A + +M S + + VT+ +++G C+
Sbjct: 210 LERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCK 269
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVL-----IGELCDKRRVFEALDILKARVVKFGL 419
+G +D+A+ + M +G + V+ + LC R EA +++A + + G
Sbjct: 270 SGKIDTALEMMEQM----ASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA-MARAGC 324
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y L+ GLC+ GK+EEA++ EM +G +P+ Y + + G G + A
Sbjct: 325 RPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAER 384
Query: 480 LRKEM 484
+ +EM
Sbjct: 385 MVEEM 389
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 45/288 (15%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+ +V T+N LM G + G ++ E + M GC PD +YS + C+ ++ +A
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAH 242
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS---------------- 346
++ E+MRD + + +VV YNTI+ G C+ G++ A E +M S
Sbjct: 243 QVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDG 302
Query: 347 --------------------GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
G VT+ LVNG C+AG ++ A+ +M +G +P
Sbjct: 303 LCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPN 362
Query: 387 GSTIEVLIGELCDKRRVFEAL----DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
T L+ LC R+ EA ++ P+ +Y LI GLC+ G++++A
Sbjct: 363 AVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDA 422
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
LK M +G +P YS ++G + G L+ EM ++VR
Sbjct: 423 LKFFQRMRSQGCDPDGVSYSTIVEGLARSGRA-----LQAEMILSEVR 465
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 113/242 (46%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RP+ + ++ + + ++ EM R GC P +++ L++ C E+ + A+
Sbjct: 113 LRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMAD 172
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L ++M V+ DVV YNT++ G C+ G + AE+ M SG V + V G
Sbjct: 173 SLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGL 232
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++G V A V M +P T ++ LC ++ AL++++ G
Sbjct: 233 CKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLN 292
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y ++ GLC+ G+ +EA V M G P + YS+ ++G K G +E A +
Sbjct: 293 VVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVR 352
Query: 483 EM 484
EM
Sbjct: 353 EM 354
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 124/246 (50%), Gaps = 3/246 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TFNAL+ GF ++G E + MA +P+ SY+ L+ C+ R EAE+L
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 305 WEEM--RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+M R D+V Y+T++ G+C+ G++ + E +E+ G+ ++ + +V
Sbjct: 68 VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++ + A+ + +M R G P T LI C + + E D L ++ G+
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCC-REKNLEMADSLLQKMAASGVKAD 186
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ GLC+ G+++EA ++ M G P + YS+F+ G K G V A + +
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLE 246
Query: 483 EMFENQ 488
+M ++
Sbjct: 247 QMRDSH 252
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 113/214 (52%), Gaps = 3/214 (1%)
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M R GC P+ +++ L+ F ++ R + E+L E M ++++ +VV+YN ++ G C++
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 333 MARAEEFFREMGLSGVESSS--VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
AEE R+M G S+ VT+ L++GYC+AG V+ + + ++ +G P+
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
++ LC R+ EAL L +++ G PT ++ LI G C E +E A + +M
Sbjct: 121 TKVVASLCKSARLGEAL-ELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA 179
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G + + Y+ +DG K G ++ A L + M
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213
>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
Length = 552
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 143/295 (48%), Gaps = 12/295 (4%)
Query: 201 ALIWEVSRGKGVISGYEIYRE-VFGLDSDATAGIGKDVKRVVR---VRPNVHTFNALMVG 256
A ++E + KG + Y V GL AG V R + V P V T+ A++ G
Sbjct: 173 AKLFEFMQLKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDG 232
Query: 257 FYREGAFEKVEDVWV---EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
R G +V+D W EM R G + + YS ++ FC+ + A K+WE M V
Sbjct: 233 LVRCG---RVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPV 289
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
+VV Y+ +IGG G+M AE FREM S + +T+ ++ GY + GD A+
Sbjct: 290 RPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALS 349
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
V+ +M G P + +LI LC+ R+ +A+ + K ++ G P +Y +IKGL
Sbjct: 350 VWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWK-HMLDRGCAPDTIAYTSMIKGL 408
Query: 434 CEEGKMEEALKVQAEMVGKGF-EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
C G ++ L++ +M+ G +P + Y+ +DG + ++ A L M +
Sbjct: 409 CVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQ 463
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 1/238 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
FN ++ R G + ++ M GC P +Y+VL+ R A + M
Sbjct: 155 AFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRM 214
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ V V+ Y ++ G G + A + EM +G+ + + ++ G+C++G++
Sbjct: 215 EREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEI 274
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D A+ V+ M P +IG L + ++ EA ++L ++ P +Y
Sbjct: 275 DCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEA-ELLFREMIDSKCAPNIITYGS 333
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+I+G + G AL V EM+G G P+ YS I+G G ++ A M+ K M +
Sbjct: 334 MIQGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLD 391
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 2/209 (0%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD ++YS +++ + R+ +A L EM V A+N ++ G++ A +
Sbjct: 117 PDKFTYSTVVSALADAGRVDDAVALVHEMVADGVVA-AEAFNPVLRAMLRAGDVKGAAKL 175
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F M L G ++ T+ LV+G G +A+ V M R+G P T ++ L
Sbjct: 176 FEFMQLKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVR 235
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
RV +A + + + + GL E Y +I G C+ G+++ ALKV MV P++
Sbjct: 236 CGRVKDAWKVAE-EMERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVV 294
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
+YSA I G G + A +L +EM +++
Sbjct: 295 LYSAMIGGLANFGKMTEAELLFREMIDSK 323
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 10/219 (4%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEK--------LWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
P S+++L+ C R+ + L E + ++ D Y+T++ + G
Sbjct: 74 PTLLSFNLLLKCVCSSLVPRDPRRYLDVALRILHEIIPGWDLAPDKFTYSTVVSALADAG 133
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A EM GV ++ F ++ RAGDV A ++ M KG P +T
Sbjct: 134 RVDDAVALVHEMVADGVVAAE-AFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAATYN 192
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
VL+ L R A+ +++ R+ + G+ P +Y ++ GL G++++A KV EM
Sbjct: 193 VLVHGLLVCGRAGAAMGVMR-RMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMER 251
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
G + +YS I G+ K G ++ A + + M + VR
Sbjct: 252 NGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVR 290
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 152/396 (38%), Gaps = 73/396 (18%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
A + F F Q K C + ++Y ++H L G A V+R R P + + +
Sbjct: 172 AAKLFEFMQLKG-CVPTAATYNVLVHGLLVCGRAGAAMGVMRRMEREGVV-PGVMTYGAV 229
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
V CG + + + +E + + E V + + C +WE
Sbjct: 230 VDGLVRCGRVKDAWKVAEE--MERNGLARNEFVYSTVITGFCKSGEID---CALKVWEAM 284
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVR--------PNVHTFNALMVGFYR 259
V +Y + G A GK + + R PN+ T+ +++ G+++
Sbjct: 285 VASPVRPNVVLYSAMIG----GLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFK 340
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK-------- 311
G + VW EM GC P+ SYS+L+ C R+++A +W+ M D+
Sbjct: 341 IGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIA 400
Query: 312 ----------------------------NVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+ + DV++YN ++ G ++ RA + M
Sbjct: 401 YTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRM 460
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G + +VT + + AG+ RKG E +E L+ LCD+RR
Sbjct: 461 LDQGCDPDTVTCNIFLREF-GAGE------------RKGRE----FLEGLVVRLCDRRRN 503
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
A ++L + K+ + P + +++ +C ++
Sbjct: 504 MAAGEVLMVMLAKY-IVPEAPIWEMVVRDVCRRKRV 538
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 1/244 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++N ++ R+G + + P SY+ LM C ERR +A L +M
Sbjct: 80 SYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDM 139
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ V DVV Y T+I G C+ ++ +A E REM SG+E + V + L+ GYC+AG
Sbjct: 140 QASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRW 199
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ V+ +M +G EP+ LI LC + +V +A ++ ++++ GL P +Y
Sbjct: 200 ECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMD-KMMERGLEPNVVTYNV 258
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI +C+EG ++EA+ ++ M+ KG Y+ I G ++ A L +EM +
Sbjct: 259 LINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGE 318
Query: 489 VRQE 492
E
Sbjct: 319 TMVE 322
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 121/247 (48%), Gaps = 3/247 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V + L+ REG +K V +M G EP+ +Y+VL+ C+E ++EA
Sbjct: 214 IEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAM 273
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM--GLSGVESSSVTFEHLVN 360
L M +K V D V YNT+I G + EM A EM G + VE + VTF +++
Sbjct: 274 SLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIH 333
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ G + A V + M G T +LIG L +V +A++++ + GL
Sbjct: 334 GLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMD-EMASSGLE 392
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y LI G C+ +++ A + ++M G EP L Y + ++G +E A
Sbjct: 393 PDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNF 452
Query: 481 RKEMFEN 487
EM +N
Sbjct: 453 FDEMHKN 459
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VRP+V T+ L+ G +K ++ EM G EP+ YS L+ +C+ R
Sbjct: 144 VRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVS 203
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++EEM + +E DVV Y +I C G++ +A + +M G+E + VT+ L+N
Sbjct: 204 KVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSM 263
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF-P 421
C+ G V A+ + N+M KG + T LI L + EA+ +L+ + + P
Sbjct: 264 CKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEP 323
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
++ +I GLC+ G+M +A +V+ M G +L ++ I G ++ V+ A L
Sbjct: 324 NVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELM 383
Query: 482 KEM 484
EM
Sbjct: 384 DEM 386
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 120/246 (48%), Gaps = 3/246 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RP ++ LM E + + +M G PD +Y L+ C+ + +A +
Sbjct: 110 RPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVE 169
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L EM + +E +VV Y+ ++ G+C+ G + F EM G+E V + L++ C
Sbjct: 170 LLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLC 229
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G V A V + M +G EP T VLI +C + V EA+ L+ +++ G+
Sbjct: 230 REGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMS-LRNNMLEKGVALDA 288
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMV-GKGF-EPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI GL +M+EA+ + EM+ G+ EP++ +++ I G K G + A +R
Sbjct: 289 VTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVR 348
Query: 482 KEMFEN 487
M EN
Sbjct: 349 DMMAEN 354
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 1/209 (0%)
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D SY+ ++A C + +A + V+Y T++ C +A
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
R+M SGV VT+ L+ G C A DVD A+ + +MC G EP L+ C
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
R +E + + + G+ P Y LI LC EGK+++A +V +M+ +G EP++
Sbjct: 197 GR-WECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQV 489
Y+ I+ KEG+V+ A LR M E V
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGV 284
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 144/351 (41%), Gaps = 55/351 (15%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAGI 233
K++ ++ +M RGL V T N LI + + V + + G+ DA
Sbjct: 233 KVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAV--- 289
Query: 234 GKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM--ARLGCEPDCYSYSVLMAV 291
T+N L+ G ++ + EM EP+ +++ ++
Sbjct: 290 ---------------TYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHG 334
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+ RMR+A ++ + M + ++V +N +IGG + ++ +A E EM SG+E
Sbjct: 335 LCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPD 394
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL- 410
S T+ L+NG+C+ VD A + + M R G EPE L+ LC++ + +A +
Sbjct: 395 SFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFD 454
Query: 411 ------KARVVKF--------------------------GLFPTEKSYMFLIKGLCEEGK 438
K VV + GL P +Y LI G
Sbjct: 455 EMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGD 514
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ A +V +M GF P + ++ + I GY +G+ E L +EM +
Sbjct: 515 LGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDI 565
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 20/235 (8%)
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
M+ G + + T N LI G++ +++ + + +D A++G+ P
Sbjct: 350 MMAENGCACNLVTFNLLIG------GLLRVHKVKKAMELMDEMASSGL----------EP 393
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+ T++ L+ GF + ++ E + +M R G EP+ Y L+A CE+ M +A +
Sbjct: 394 DSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFF 453
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM KN + DVVAY+T+I G C + + AEEF + M G+ SVT+ L+N + +
Sbjct: 454 DEMH-KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANS 512
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLI---GELCDKRRVFEALDILKARVVKF 417
GD+ +A V M GF P+ + + LI G D +V E + + A+ +
Sbjct: 513 GDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIAL 567
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 127/246 (51%), Gaps = 2/246 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEM-ARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+P+V ++ L+ G + G + D++ +M A GC P+ ++Y+ L+ C++ R+ A
Sbjct: 43 QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAAR 102
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ E R ++ DVV YNT++ ++G + A F +M G + V+F ++ G
Sbjct: 103 AVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGL 162
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRA + A+ V+N+M + F P T V+I LC ++ EA +L R+V G P
Sbjct: 163 CRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLD-RMVSEGCRPD 221
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ G G+++ AL + MV +G P + Y+ ID K G V+ A + +
Sbjct: 222 LVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFR 281
Query: 483 EMFENQ 488
E+ N+
Sbjct: 282 ELVANK 287
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 6/243 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N LM ++ G ++ + +M G P S++ ++ C RR+ +A ++
Sbjct: 115 PDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEV 174
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM D++ ++V Y+ +I G C+ ++ A++ M G V + LV G+
Sbjct: 175 FNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSA 234
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG +DSA+ + M +G P+ T V+I +LC RV +A +I + +V P
Sbjct: 235 AGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFR-ELVANKCSPNVV 293
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY-MKEGNVEMATMLRKE 483
+Y LI G C +++E KV EM + P++ Y+ I G M + N E M R E
Sbjct: 294 TYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFR-E 349
Query: 484 MFE 486
M E
Sbjct: 350 MSE 352
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 3/211 (1%)
Query: 284 SYSVLMAVFCEERRMREA-EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+ S+++ C R+ +A E + + + DVV+Y T+I G C++G + A + FR+
Sbjct: 12 TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRK 71
Query: 343 M-GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
M G ++ T+ LV+G C+ +D+A V + ++ F P+ T L+ L
Sbjct: 72 MVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLG 131
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
RV EAL ++ + G PT S+ +I GLC ++ +AL+V EM+ + F P+L Y
Sbjct: 132 RVDEALATF-TQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTY 190
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
S IDG K ++ A L M R +
Sbjct: 191 SVVIDGLCKSDQLDEAQQLLDRMVSEGCRPD 221
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 200 NALIWEVSRGKGVISGYEIYREVFGLD-----------------SDATAGIGKDVKRVVR 242
NA+I + R + + E++ E+ D SD + + R+V
Sbjct: 156 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 215
Query: 243 --VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
RP++ + L++GF G + + M GC PD +Y+V++ C+ R+ +
Sbjct: 216 EGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDD 275
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +++ E+ +VV Y+ +IGG+C + + REM + VT+ ++
Sbjct: 276 AHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIW 332
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G + A ++ +M GF P+ T
Sbjct: 333 GLSMVDRNEEAYGMFREMSECGFVPDART 361
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF-EPEGSTIEVLIGELCDKR 401
M + G++ + T ++ G CR G V A+ ++ +P+ + LI LC
Sbjct: 1 MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
RV A D+ + V G P +Y L+ GLC++ +++ A V AE + F P + Y
Sbjct: 61 RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFE 486
+ + + G V+ A +M E
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTE 145
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ ++ + G + +++ E+ C P+ +YS L+ +C R+ E K+
Sbjct: 255 PDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV 314
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
MR+ +VV YNT+I G + A FREM G + T+ L
Sbjct: 315 ---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 365
>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
Length = 795
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 124/248 (50%), Gaps = 2/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + FN ++ G R +E ++ + G PD ++Y L+ + ++ EA L
Sbjct: 362 PSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNL 420
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W++M++ V+ +V ++++ G+CE G M A + + EM G + VT+ L+ GY +
Sbjct: 421 WDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIK 480
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D A + N+M + G T +LI LC RV E ++LK R V G PT
Sbjct: 481 KKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLK-RFVSEGFVPTTM 539
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I G + G M AL + +M KG P++ Y++FIDGY + ++A L M
Sbjct: 540 TYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYM 599
Query: 485 FENQVRQE 492
N + +
Sbjct: 600 RCNGIHPD 607
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 158/368 (42%), Gaps = 25/368 (6%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLE-VKNIEKIETCVDIVR 185
VI+ LR+ + + + LF+++V T P VF C + + K+ V++
Sbjct: 370 VIKGLLRNKQWEDAIALFDLVVDT-----GVPDVF--TYGCLIHWLSKHHKVHEAVNLWD 422
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
+ G+ + TC++L+ + ++Y E+ G P
Sbjct: 423 KMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKG----------------FPP 466
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+ LM G+ ++ AF+K + EM + G Y+Y++L+ C R+ E +++
Sbjct: 467 NEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEML 526
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ + + YN+II GF + G M A +R+M G+ + VT+ ++GYCR
Sbjct: 527 KRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRT 586
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
D A+ + M G P+ + I C + + AL L ++K GL P
Sbjct: 587 NCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFL-VLLLKDGLTPNVTV 645
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y + G M EA K M+ + EIY+ IDG+ K GNV A L EM
Sbjct: 646 YNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEML 705
Query: 486 ENQVRQED 493
N +D
Sbjct: 706 ANHNIPDD 713
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 160/366 (43%), Gaps = 40/366 (10%)
Query: 121 IGPARDVIRVALRSPENDPKLKLFEVLVK----------TYREC------GSAP--FVFD 162
IG A D+ A+R P + VL+K TY+ C G P + F+
Sbjct: 310 IGKALDLFDEAVRDGVT-PTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFN 368
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
L+IK L K E D+V + G+ V T LI +S+ ++++ V
Sbjct: 369 LVIKGLLRNKQWEDAIALFDLV---VDTGVP-DVFTYGCLIHWLSKH------HKVHEAV 418
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
D AG V+P++ T ++L++G+ +G ++ ++ EM G P+
Sbjct: 419 NLWDKMKEAG----------VKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNE 468
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+Y+ LM + +++ +A L EM V YN +I G C + + +E +
Sbjct: 469 VTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKR 528
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
G +++T+ ++NG+ +AG + SA+ +Y MC KG P T I C
Sbjct: 529 FVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNC 588
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
A+ +L G+ P +Y I C++G M AL ++ G P++ +Y+
Sbjct: 589 CDLAVKLLIYMRCN-GIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYN 647
Query: 463 AFIDGY 468
+F+ GY
Sbjct: 648 SFVTGY 653
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 2/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P T+ L+ G EG ++ + +M G P Y +++++ ++ +A
Sbjct: 325 VTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAI 384
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++ + D V DV Y +I + ++ A + +M +GV+ S VT L+ GY
Sbjct: 385 ALFDLVVDTGVP-DVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGY 443
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G +D A+ +Y++M KGF P T L+ K++ F+ L + + G+
Sbjct: 444 CEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYI-KKKAFDKAYALLNEMHQNGVSCG 502
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E +Y LI GLC ++ E ++ V +GF P+ Y++ I+G++K G + A + +
Sbjct: 503 EYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYR 562
Query: 483 EMFENQV 489
+M E +
Sbjct: 563 QMCEKGI 569
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 125/282 (44%), Gaps = 36/282 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+ + + G + ++ V +M G +P ++Y+ ++ V + RM EA
Sbjct: 219 VKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEAL 278
Query: 303 KLWEEMR-DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L ++M + DV T++ G+C GE+ +A + F E GV ++VT+ L+ G
Sbjct: 279 RLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKG 338
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGS--------------------------------- 388
G D + M +G P
Sbjct: 339 CDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGVPDV 398
Query: 389 -TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI L +V EA+++ ++ + G+ P+ + L+ G CE+G M+EALK+ +
Sbjct: 399 FTYGCLIHWLSKHHKVHEAVNLWD-KMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYS 457
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EM GKGF P+ Y+ + GY+K+ + A L EM +N V
Sbjct: 458 EMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGV 499
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 136/312 (43%), Gaps = 22/312 (7%)
Query: 153 ECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
CG + +++LI V + +++ ++++ +S G T N++I + +
Sbjct: 500 SCGE--YTYNILINGLCMVDRVCEVD---EMLKRFVSEGFVPTTMTYNSIINGFVKAGMM 554
Query: 213 ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
S +YR++ GI PN+ T+ + + G+ R + + +
Sbjct: 555 GSALAMYRQM------CEKGI----------TPNIVTYTSFIDGYCRTNCCDLAVKLLIY 598
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M G PD +Y+ + +FC++ M A + + +V YN+ + G+ +
Sbjct: 599 MRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKM 658
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
MA A +F+ M + + + + L++G+ + G+V A+ +Y++M P+ T
Sbjct: 659 MAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTA 718
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
L LC + A +L + + + P +Y LI +GK++EA ++ +M+
Sbjct: 719 LTHGLCRSGDIDGAKRLLD-DMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSS 777
Query: 453 GFEPSLEIYSAF 464
G P Y+ F
Sbjct: 778 GVVPDDTTYNIF 789
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 2/239 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ + L+V R + ++ EM G D Y V+M R +A
Sbjct: 149 VVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVVGRMHGDAV 208
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L++EM V+ D Y I G C++ + RA + +M +G++ T+ +V+
Sbjct: 209 RLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVL 268
Query: 363 CRAGDVDSAILVYNDM-CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ G +D A+ + + M G + + L+ C + +ALD+ V+ G+ P
Sbjct: 269 VKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFD-EAVRDGVTP 327
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
T +Y LIKG EG +E K+ +M+ +G PS ++ I G ++ E A L
Sbjct: 328 TNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIAL 386
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 118/242 (48%), Gaps = 1/242 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNV T+ LM G+ + F+ + EM + G + Y+Y+VL+ C R+ E +
Sbjct: 468 KPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDG 527
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ + + ++ YN+II GF + G M A +++M G+ + +T+ ++GYC
Sbjct: 528 MLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYC 587
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G D A+ + ND+ R+G +P+ LI C + + AL +L ++K GL P
Sbjct: 588 RTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLL-VILLKDGLAPNT 646
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
Y LI G M+E K M+ G Y+ IDG+ K+GNV A L E
Sbjct: 647 VVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSE 706
Query: 484 MF 485
M
Sbjct: 707 MM 708
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 123/233 (52%), Gaps = 2/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + ++ G + ++ ++ EMA G PD ++Y+ L+ C+ ++REA L
Sbjct: 365 PSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNL 423
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ M+ V+ + YN+++ G+C+ G M A + + EM + G + + VT+ L+ GY
Sbjct: 424 FDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIA 483
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D D+A + ++M + G T VLI +C RV E +LK+ + + G PT
Sbjct: 484 KKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSE-GFIPTMM 542
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y +I G + G M A V +M KG P++ Y++FIDGY + G +MA
Sbjct: 543 TYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMA 595
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + T+N+++ GF + G V+ +M G P+ +Y+ + +C A K+
Sbjct: 539 PTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKM 598
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++R + ++ D+VAYN +I GFC+ G M+ A + + G+ ++V + L+ GY
Sbjct: 599 LNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKN 658
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ Y M + G + ST LI V AL++ + K G P
Sbjct: 659 LNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAK-GYIPDAF 717
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ L GLC G ++ A K+ EM P++ IY+ I+GY+++ ++ A L EM
Sbjct: 718 TFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEM 777
Query: 485 FENQVRQED 493
++ +D
Sbjct: 778 LNMGIQPDD 786
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 144/307 (46%), Gaps = 20/307 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+ +++LI V + +++ +++ MS G + T N++I + + S + +
Sbjct: 507 YTYNVLINGICMVDRVCEVDG---MLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTV 563
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
Y+++ R + PN+ T+ + + G+ R G + + ++ R G
Sbjct: 564 YQQM----------------REKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGL 607
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+PD +Y+ L+ FC+E M A +L + + + V YN++I G+ + M +
Sbjct: 608 QPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSK 667
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F+ M G+ + + T+ L++G+ + G+V A+ +Y++M KG+ P+ T L LC
Sbjct: 668 FYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLC 727
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ A +L+ + + + P Y LI G + K++EA ++ EM+ G +P
Sbjct: 728 RSGDIDGAKKLLE-EMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDD 786
Query: 459 EIYSAFI 465
Y +
Sbjct: 787 TTYDILV 793
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 123/244 (50%), Gaps = 2/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P + L+ G + G +K ++ +M G P + S+++ +RR ++A
Sbjct: 328 IVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAV 387
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+EEM D + DV YN +I C+ ++ A F M +GV+ S T+ L+ GY
Sbjct: 388 CLFEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGY 446
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G +D A+ +Y++M +GF+P T L+ K+ A +L + + G+
Sbjct: 447 CKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLD-EMKQNGVSCN 505
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ +Y LI G+C ++ E + + +GF P++ Y++ I+G++K G + A + +
Sbjct: 506 DYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQ 565
Query: 483 EMFE 486
+M E
Sbjct: 566 QMRE 569
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 159/368 (43%), Gaps = 58/368 (15%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG---------LDSDATA 231
D +++RG+ + + L+ +RG ++ E+ G D+ +A
Sbjct: 142 TDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSA 201
Query: 232 ----GIGKDVKRV------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
G+ +D R+ + P+ + + + G + + EM +G +
Sbjct: 202 CLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTC 261
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
++Y ++ V + RM EA ++ +EMRD + DV+ T++ G+C E+ A F+
Sbjct: 262 DFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFK 321
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE---VLIGELC 398
E G+ + V + L+ G + G A + M +G P ST E VL G L
Sbjct: 322 ETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLP--STFELSLVLKGLLN 379
Query: 399 DKR---------------------------------RVFEALDILKARVVKFGLFPTEKS 425
D+R ++ EAL++ R+ K G+ P+ +
Sbjct: 380 DRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFD-RMKKAGVKPSINT 438
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y L+ G C++G M+EA+K+ +EM +GF+P++ Y + GY+ + + + A L EM
Sbjct: 439 YNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMK 498
Query: 486 ENQVRQED 493
+N V D
Sbjct: 499 QNGVSCND 506
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 30/172 (17%)
Query: 141 LKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
L+L +L+K G AP V++ LI KN+ ++ ++ G+ ST
Sbjct: 631 LQLLVILLKD----GLAPNTVVYNSLIT---GYKNLNMMKEVSKFYESMIKGGIVADTST 683
Query: 199 CNALIWEVSRGKGVISGYEIYREVF----------------GL----DSDATAGIGKDVK 238
LI S+ V E+Y E+ GL D D + ++++
Sbjct: 684 YTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMR 743
Query: 239 RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
R+ VRPNV +N L+ G+ R+ ++ + EM +G +PD +Y +L++
Sbjct: 744 RL-DVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 1/244 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VRPNV +N ++ G ++G + D++ ++ G +PD ++Y+ L+ FC + RE
Sbjct: 214 VRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVT 273
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L +M D+NV +V YN +I C+ G + +A + M G VTF L++GY
Sbjct: 274 RLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGY 333
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C DV A +++ G P+ + +LI C R+ EAL + K L P
Sbjct: 334 CLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYK-KLAPN 392
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI GLC+ G++ A ++ + + G P++ Y+ +D K V+ A L
Sbjct: 393 IVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFN 452
Query: 483 EMFE 486
MFE
Sbjct: 453 LMFE 456
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 118/227 (51%), Gaps = 1/227 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RP++ TFN LM G+ + ++ A G PD +SY++L+ +C+ R+ EA
Sbjct: 320 RPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALS 379
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L+ +M K + ++V Y+++I G C+ G ++ A E F + G + +T+ +++ C
Sbjct: 380 LFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALC 439
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ VD AI ++N M +G P S+ +LI C +R+ EA+++ + + + L P
Sbjct: 440 KIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFE-EMHRRNLVPDS 498
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+Y LI GLC+ G++ A ++ M G + Y+ D + K
Sbjct: 499 VTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSK 545
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 120/245 (48%), Gaps = 1/245 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
V NV+T+N L+ ++G K D+ M G PD +++ LM+ +C + EA
Sbjct: 283 NVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEA 342
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KL++ + + DV +YN +I G+C+ + A F +M + + VT+ L++G
Sbjct: 343 RKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDG 402
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C++G + A +++ + G P T +++ LC + V +A+++ + GL P
Sbjct: 403 LCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFER-GLTP 461
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
SY LI G C+ +++EA+ + EM + P Y+ IDG K G + A L
Sbjct: 462 NVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELF 521
Query: 482 KEMFE 486
M +
Sbjct: 522 NVMHD 526
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 144/319 (45%), Gaps = 30/319 (9%)
Query: 108 YATIIHILSRARLIGPARDVIR-VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
Y I+ L + L+ ARD+ V R DP + + L+ + G V LL
Sbjct: 221 YNMIVDGLCKDGLVTEARDLYSDVVGRGI--DPDVFTYTCLIHGFCGLGQWREVTRLL-- 276
Query: 167 CCLEVKNIE-KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK--------GVISGYE 217
C + +N+ + T ++ L +G+ K L+ E RG+ ++SGY
Sbjct: 277 CDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIE--RGQRPDLVTFNTLMSGYC 334
Query: 218 IYREVFG----LDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
+Y +V D+ A GI P+V ++N L++G+ + ++ ++ +M
Sbjct: 335 LYNDVVEARKLFDTFAECGI----------TPDVWSYNILIIGYCKNNRIDEALSLFNKM 384
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
P+ +YS L+ C+ R+ A +L+ + D +V+ YN ++ C+I +
Sbjct: 385 NYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLV 444
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+A E F M G+ + ++ L+NGYC++ +D A+ ++ +M R+ P+ T L
Sbjct: 445 DKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCL 504
Query: 394 IGELCDKRRVFEALDILKA 412
I LC R+ A ++
Sbjct: 505 IDGLCKSGRISHAWELFNV 523
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 110/267 (41%), Gaps = 36/267 (13%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T +M G G K + + G D +Y L+ C+ REA +L
Sbjct: 147 NAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELL 206
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M + V +VV YN I+ G C+ G + A + + ++ G++ T+ L++G+C
Sbjct: 207 HKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGL 266
Query: 366 G---------------DVDSAILVYN----DMCRKGF----------------EPEGSTI 390
G +V+ + YN +C+KG P+ T
Sbjct: 267 GQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTF 326
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
L+ C V EA + + G+ P SY LI G C+ +++EAL + +M
Sbjct: 327 NTLMSGYCLYNDVVEARKLFDT-FAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMN 385
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMA 477
K P++ YS+ IDG K G + A
Sbjct: 386 YKKLAPNIVTYSSLIDGLCKSGRISYA 412
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 1/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V FN ++ + + + +M G P + S+L+ +C M A +
Sbjct: 76 PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + + + + TI+ G C GE+ +A EF + G VT+ L+NG C+
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCK 195
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G A + + M + P +++ LC V EA D L + VV G+ P
Sbjct: 196 IGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARD-LYSDVVGRGIDPDVF 254
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C G+ E ++ +MV + ++ Y+ ID K+G + A +R M
Sbjct: 255 TYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLM 314
Query: 485 FENQVRQE 492
E R +
Sbjct: 315 IERGQRPD 322
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 7/229 (3%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T + L+ + G V + + G + + + + +M C +R+A
Sbjct: 109 ITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKAL 168
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + + + D V Y T+I G C+IG A E +M V + V + +V+G
Sbjct: 169 EFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGL 228
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGL 419
C+ G V A +Y+D+ +G +P+ T LI C R V L + R V +
Sbjct: 229 CKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNV 288
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+ +Y LI LC++G + +A ++ M+ +G P L ++ + GY
Sbjct: 289 Y----TYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGY 333
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 111/263 (42%), Gaps = 39/263 (14%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVK-------------- 149
++ +Y +I L + ++G A D+ + + + P L F L+
Sbjct: 287 NVYTYNILIDALCKKGMLGKAHDMRNLMIERGQR-PDLVTFNTLMSGYCLYNDVVEARKL 345
Query: 150 --TYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
T+ ECG P V+ I KN +I+ + + + + L+ + T ++LI +
Sbjct: 346 FDTFAECGITPDVWSYNILIIGYCKN-NRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLC 404
Query: 208 RGKGVISGYEIYREV-----------FGLDSDATAGIGKDVKRVVRV---------RPNV 247
+ + +E++ + + + DA I + V + + + PNV
Sbjct: 405 KSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKI-QLVDKAIELFNLMFERGLTPNV 463
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
++N L+ G+ + ++ +++ EM R PD +Y+ L+ C+ R+ A +L+
Sbjct: 464 SSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNV 523
Query: 308 MRDKNVEHDVVAYNTIIGGFCEI 330
M D DV+ YN + F +I
Sbjct: 524 MHDGGPPVDVITYNILFDAFSKI 546
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 118/241 (48%), Gaps = 6/241 (2%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVE-MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
TF+ L+ G + D+ + M LGC P+ +SY++L+ C+E R ++A L
Sbjct: 133 TFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHT 192
Query: 308 MRDKNVEH----DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
M + DVV+Y T+I G G++ +A F EM G+ + +T+ L++GYC
Sbjct: 193 MMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYC 252
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+G AI ++ MCR G EP+ T L+ LC R EA + + +VK G P
Sbjct: 253 SSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDS-MVKKGHKPDS 311
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
Y L+ G EG + + ++ MV G +P I++ I Y K G V+ A + +
Sbjct: 312 SIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSK 371
Query: 484 M 484
M
Sbjct: 372 M 372
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 122/246 (49%), Gaps = 5/246 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N L+ G+ G ++ ++ +M R G EPD +Y+ LM C+ R EA K+
Sbjct: 239 PNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKV 298
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ M K + D Y T++ G+ G + + + M +G + F L+ Y +
Sbjct: 299 FDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAK 358
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G VD A+L ++ M ++G P T ++ LC +V +A+ R++ GL P
Sbjct: 359 HGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFD-RLISEGLTPNGV 417
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ LI GLC K ++A ++ EM+G+G P+ ++ ++ KEG V A K +
Sbjct: 418 VFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRA----KNI 473
Query: 485 FENQVR 490
F+ VR
Sbjct: 474 FDLMVR 479
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 123/250 (49%), Gaps = 6/250 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN F L+ G ++K E++ VEM G P+ ++ L+ C+E + A+ +
Sbjct: 414 PNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNI 473
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ M +V+ DV+ Y T+I G+C G++ A + M L GV+ + VT+ ++NGYC+
Sbjct: 474 FDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCK 533
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G ++ A ++ M KG P ++ L RR+ A + L ++K G+
Sbjct: 534 NGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKE-LYLWMIKCGIKLPIG 592
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE-----MATM 479
+Y +++GLC+ ++AL++ + F ++ ID +K G + A++
Sbjct: 593 TYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASL 652
Query: 480 LRKEMFENQV 489
L + + N V
Sbjct: 653 LARGLVPNVV 662
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 123/282 (43%), Gaps = 36/282 (12%)
Query: 243 VRPNVHTFNALMV-----------------------------------GFYREGAFEKVE 267
V P+V T+N LMV G+ EG ++
Sbjct: 272 VEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMH 331
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
+ M R G +PD Y +++L+ + + + EA + +MR + + ++V Y T++
Sbjct: 332 QLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDAL 391
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C +G++ A F + G+ + V F L++G C D A + +M +G P
Sbjct: 392 CRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNT 451
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
L+ LC + V A +I +V+ + +Y LI G C +GK++EA K+
Sbjct: 452 IFFNTLLNHLCKEGMVTRAKNIFDL-MVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLE 510
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
MV G +P+ Y+ I+GY K G +E A L ++M V
Sbjct: 511 GMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGV 552
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 5/237 (2%)
Query: 245 PNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
PN ++N L+ G E A + + + R GC PD SY+ ++ E ++ +
Sbjct: 165 PNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDK 224
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L++EM D+ + + + YN ++ G+C G+ A FR+M GVE VT+ L+
Sbjct: 225 AYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMV 284
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
C+ G A V++ M +KG +P+ S L+ + + + +L +V+ G
Sbjct: 285 YLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDV-MVRNGTQ 343
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P + LI + G ++EA+ ++M +G P++ Y +D + G V+ A
Sbjct: 344 PDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDA 400
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 124/257 (48%), Gaps = 1/257 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ V V+ +V T+ L+ G+ +G ++ + M G +P+ +Y+ ++ +C+
Sbjct: 475 DLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKN 534
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ +A L+ +M K V +V Y+TI+ G + +A A+E + M G++ T+
Sbjct: 535 GRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTY 594
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
++ G C+ D A+ +++++C F + T ++I L R EA D+ A ++
Sbjct: 595 NIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLF-ASLL 653
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
GL P +Y ++K L E+G +EE + + G + +A + ++G V
Sbjct: 654 ARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVR 713
Query: 476 MATMLRKEMFENQVRQE 492
A + ++ EN E
Sbjct: 714 KAGVYLSKIDENNFSLE 730
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 112/248 (45%), Gaps = 11/248 (4%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL---GCEPDCYSYSVLMAVFCEERRMR 299
+ PN+ T+ +M R G KV+D + RL G P+ + L+ C +
Sbjct: 377 LHPNIVTYGTVMDALCRVG---KVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWD 433
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+AE+L EM + + + + +NT++ C+ G + RA+ F M V+ +T+ L+
Sbjct: 434 KAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLI 493
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+GYC G VD A + M G +P T +I C R+ +A + + K G+
Sbjct: 494 DGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASK-GV 552
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P Y ++ GL + ++ A ++ M+ G + + Y+ + G + + A
Sbjct: 553 NPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDA-- 610
Query: 480 LRKEMFEN 487
LR MF N
Sbjct: 611 LR--MFHN 616
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 358 LVNGYC-RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
+V G C RAG +D A + R G+ + T L+ LC +R +A+DI R+
Sbjct: 101 IVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPA 160
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK----GFEPSLEIYSAFIDGYMKEG 472
G P SY L+KGLC+E + ++AL + M+ G P + Y+ I+G ++EG
Sbjct: 161 LGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREG 220
Query: 473 NVEMATMLRKEMFE 486
++ A L EM +
Sbjct: 221 QLDKAYCLFDEMLD 234
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 4/198 (2%)
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
RE+ + + ++ D+ Y+ +IG G + A + +G + ++TF L
Sbjct: 78 RESPAVALSLFNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPL 137
Query: 359 VNGYCRAGDVDSAI-LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK---ARV 414
+ G C A+ + M G P + +L+ LCD+ R +AL +L A
Sbjct: 138 LKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADD 197
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ G P SY +I GL EG++++A + EM+ +G P+ Y+ + GY G
Sbjct: 198 TRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKP 257
Query: 475 EMATMLRKEMFENQVRQE 492
+ A + ++M + V +
Sbjct: 258 KEAIGIFRKMCRDGVEPD 275
>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
Length = 584
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 128/255 (50%), Gaps = 4/255 (1%)
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSV 287
A A ++ R + P+V TF ++ GF + E+ +++ EM + C+PDC+ Y V
Sbjct: 112 ADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGV 171
Query: 288 LMAVFCEERRMREAEKLWEEMR-DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE-MGL 345
L+ +C+E RM A +L EMR ++ ++ DVV YN+I+ G C A +F E M L
Sbjct: 172 LIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVL 231
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
G + VT+ L+ G C+A + A+ ++N M + +P + V+I L RV++
Sbjct: 232 QGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYD 291
Query: 406 ALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
A +++ + G Y LI GLC+ G +++A + M G P+ Y+ I
Sbjct: 292 AYRVVR-EMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLI 350
Query: 466 DGYMKEGNVEMATML 480
D + + E A L
Sbjct: 351 DTFCRNDRTETALGL 365
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 117/255 (45%), Gaps = 19/255 (7%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVE-MARLGCEPDCYSYSVLMAVFCEERRMRE 300
R++P+V +N+++ G R F + E M GC P +Y+ L+ C+ ++M+
Sbjct: 197 RIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKL 256
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A ++W M ++ ++ +V+Y+ II G + G + A REM G E + V + L++
Sbjct: 257 AVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLID 316
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C++G +D A +Y M R G P T LI C R AL GLF
Sbjct: 317 GLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETAL----------GLF 366
Query: 421 PTEKSYMFL--------IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ Y L + GLC E ++++A + EM G Y+ + G +
Sbjct: 367 DHIRDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSE 426
Query: 473 NVEMATMLRKEMFEN 487
E A + +E+ ++
Sbjct: 427 RPEEAFRILEELGDD 441
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 2/207 (0%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P+ ++++ L+ + R+ +A + E MRD + DVV + +I GFC+ M RA E
Sbjct: 93 PNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEI 152
Query: 340 FREMGLSG-VESSSVTFEHLVNGYCRAGDVDSAILVYNDM-CRKGFEPEGSTIEVLIGEL 397
F+EM S + + L++GYC+ +D A+ + +M + +P+ ++ L
Sbjct: 153 FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 212
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C R EA L +V G PT +Y LI+G C+ KM+ A+++ M+ + +P+
Sbjct: 213 CRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPT 272
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ YS IDG K G V A + +EM
Sbjct: 273 IVSYSVIIDGLSKAGRVYDAYRVVREM 299
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 145/338 (42%), Gaps = 53/338 (15%)
Query: 141 LKLFEVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
L+ ++ L +T G +P V + LI+ + K K++ V I ++ R + + +
Sbjct: 219 LEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAK---KMKLAVRIWNAMLERKIQPTIVS 275
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGL-------------DSDATAGIGKDVKRVVRVR- 244
+ +I +S+ V Y + RE+ L D +G D + R+
Sbjct: 276 YSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMK 335
Query: 245 -----PNVHTFNALMVGFYRE-------GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
PN T+ L+ F R G F+ + D C D Y+ +++
Sbjct: 336 RSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDY--------CPLDVAMYTAVVSGL 387
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTII-GGFCEIGEMARAEEFFR---EMGLS-G 347
C ERR+ +A L+ EMR V D AYN ++ G F R EE FR E+G G
Sbjct: 388 CRERRLDDARALFREMRLAGVSADTHAYNVLLHGAF----RSERPEEAFRILEELGDDPG 443
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
++ +T+ ++ G C ++S ++++ +M ++G P+ +T LI L + A
Sbjct: 444 CVANLLTYNTVIAGCC----LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAF 499
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
D+ + ++ GL P ++ LC + + A KV
Sbjct: 500 DLCE-EMLASGLSPPSGVLGRVVARLCWSRRGDLAAKV 536
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 3/167 (1%)
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
E G+ A F RE +G +++ C++GD+ A+L+ M G P
Sbjct: 36 ESGDANAAARFLREKTAAGSIFPGFLSSVVIDRACKSGDLRGALLILATMLHSGTPPPNQ 95
Query: 389 -TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
LI L R+ +A L+ + G+ P ++ +I+G C+ ME A ++
Sbjct: 96 HAFASLIDALSKSTRLADAARALEL-MRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQ 154
Query: 448 EMVGKG-FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
EM+ +P +Y IDGY KE ++ A L +EM + Q D
Sbjct: 155 EMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPD 201
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 31/274 (11%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+V +N ++ E F+ + ++ M R G E + Y+Y++L+ C+ R+ A K
Sbjct: 140 KPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARK 199
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE-------------------------- 337
L EM K D V+Y T++ C +G++ A
Sbjct: 200 LLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKM 259
Query: 338 ----EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
E F EM + G++ +T+ ++N G+V+ A+ V M +G P T L
Sbjct: 260 EEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSL 319
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ R+ EALD+ R+++ G P +Y LI GLC GKM EA+ V +M G
Sbjct: 320 MKGYFMGGRLCEALDLWN-RMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNG 378
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
P+ YS IDG+ K G++ A+ + +M N
Sbjct: 379 VFPNETTYSTLIDGFAKAGDLVGASEIWNKMITN 412
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 202/484 (41%), Gaps = 68/484 (14%)
Query: 75 SQIALGLKNNPH--LALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVAL 132
S++ LKN P+ LAL FF + + KH+ +Y T+I L R I + ++++ +
Sbjct: 41 SEVLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQL-M 99
Query: 133 RSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK-----CCLEVK----------NIEKI 177
+ LF +++ YR G A + C VK + K
Sbjct: 100 KLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKF 159
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATA---- 231
+ I + G+ + V T N L+ + + V + ++ E+ G DA +
Sbjct: 160 QMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTV 219
Query: 232 -------GIGKDVKRV-VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCY 283
G ++ + + +R++ V +NAL+ GF RE E+V +++ EMA G +PD
Sbjct: 220 VSSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVI 279
Query: 284 SYSVLMAVFCE-----------------------------------ERRMREAEKLWEEM 308
+YS ++ E R+ EA LW M
Sbjct: 280 TYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRM 339
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ E + VAYNT+I G C G+M A ++M +GV + T+ L++G+ +AGD+
Sbjct: 340 IQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDL 399
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A ++N M G P ++ LC AL +++ + P ++
Sbjct: 400 VGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIE-NMANGNCPPNTITFNT 458
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
IKGLC GK E A+KV +M G P++ Y+ +DG A + E+ E +
Sbjct: 459 FIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEME 518
Query: 489 VRQE 492
++
Sbjct: 519 IKSN 522
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 100/190 (52%), Gaps = 2/190 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TFN + G G E V +M + GC P+ +Y+ ++ +R REA ++
Sbjct: 451 PNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQI 510
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+ + ++ ++V YNTI+ GFC G A + ++ + G + S+T+ ++ YC+
Sbjct: 511 VGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCK 570
Query: 365 AGDVDSAILVYNDMCRKG-FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G+V +AI + + + +KG P+ T L+ +C+ V EA+ L +++ G+ P
Sbjct: 571 QGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLD-KMINEGICPNR 629
Query: 424 KSYMFLIKGL 433
++ L++GL
Sbjct: 630 ATWNALVRGL 639
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 35/260 (13%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN T++ L+ GF + G ++W +M GC P+ Y+ ++ V C A
Sbjct: 379 VFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHAL 438
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG--------------- 347
L E M + N + + +NT I G C G+ A + +M G
Sbjct: 439 HLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGL 498
Query: 348 --------------------VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
++S+ VT+ +++G+C AG A+ + + G +P+
Sbjct: 499 FNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDS 558
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T +I C + V A+ ++ K +P +Y L+ G+C ++EA+
Sbjct: 559 ITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLD 618
Query: 448 EMVGKGFEPSLEIYSAFIDG 467
+M+ +G P+ ++A + G
Sbjct: 619 KMINEGICPNRATWNALVRG 638
>gi|414867988|tpg|DAA46545.1| TPA: hypothetical protein ZEAMMB73_823043 [Zea mays]
Length = 311
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 106/213 (49%), Gaps = 34/213 (15%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM + C+ + +Y++ M+ + + +A LW+EM + V+ D+ AYNT+I G
Sbjct: 128 EMDKYSCKHNVCTYNIRMSGYLNGEHVEKARTLWDEMIQEGVQPDITAYNTMISG----- 182
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
G+C A D ++A+LV DM RKGF +E
Sbjct: 183 -----------------------------GHCMARDAEAAMLVRADMKRKGFVLAPEVVE 213
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
L+ LC RV + L +L+ + + PT +SY LI G C+ K+E A+++QAEM G
Sbjct: 214 ELLDGLCKNGRVEDGLSVLREEMKREEFVPTWRSYEVLIMGFCDGWKVEVAIRLQAEMAG 273
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
KGF E+Y AFI Y K N EM LRKEM
Sbjct: 274 KGFTAGSEVYYAFISAYEKSENYEMVEKLRKEM 306
>gi|255580733|ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529229|gb|EEF31203.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 619
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 178/398 (44%), Gaps = 21/398 (5%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVAL-RSPENDPKLKLFEV 146
AL FF ++ + H + SY +++IL RA+L+ A+ ++ L ++ E+ + + +
Sbjct: 93 ALGFFHWSAQRKNFVHGVWSYCLMVNILVRAQLLNDAQALLESILKKNVEDSSEFLIVDS 152
Query: 147 LVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
L+ +Y+ S+P VF+LL++ +++ E I L G + + + N LI V
Sbjct: 153 LLDSYKIIVSSPLVFNLLVQAYAKLR---LFEIGFKICFYLEEHGFFLSLLSFNTLIHVV 209
Query: 207 SRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKV 266
+ ++IY + I K R+ PN T ++ +EG +
Sbjct: 210 QKSDQYPLVWKIYEHM----------IHK------RIYPNEATIRTMINALCKEGKLQMF 253
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
D+ + C P + ++ +E R+ + + M KN+ D VAY+ I+
Sbjct: 254 VDILDRIHGKRCRPLVIINACMVFRILQEGRVDVGIGILKGMLQKNMILDTVAYSLIVFA 313
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
+G + A E + M G ++S L+ YC G ++ A ++ +M G EP
Sbjct: 314 KVRLGNLDSALEVYEAMLKRGFNANSFVHTVLIGAYCNGGKIEKANQLFGEMGTMGLEPY 373
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T LI RV E L + ++++ GL P+ ++ +I LCE G++ +A
Sbjct: 374 DETFNFLIEGCAKAGRVEECLSYFE-KMIERGLVPSLLAFNKMIAKLCETGEVNQANTFL 432
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ KGF P YS + GY ++ ++ L EM
Sbjct: 433 TRLLDKGFSPDETTYSYLMTGYERDNQIQEVLKLYYEM 470
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 165/374 (44%), Gaps = 45/374 (12%)
Query: 104 SLSSYATIIHILSRA---------------RLIGPARDVIRVALRSPENDPKLKLFEVLV 148
SL S+ T+IH++ ++ + I P IR + + + KL++F ++
Sbjct: 198 SLLSFNTLIHVVQKSDQYPLVWKIYEHMIHKRIYPNEATIRTMINALCKEGKLQMFVDIL 257
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIE--KIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
P V +I C+ + ++ +++ + I++ ++ + + + + +++
Sbjct: 258 DRIHGKRCRPLV---IINACMVFRILQEGRVDVGIGILKGMLQKNMILDTVAYSLIVFAK 314
Query: 207 SRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY-REGAFEK 265
R + S E+Y + +KR VHT +++G Y G EK
Sbjct: 315 VRLGNLDSALEVYEAM--------------LKRGFNANSFVHT---VLIGAYCNGGKIEK 357
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
++ EM +G EP +++ L+ + R+ E +E+M ++ + ++A+N +I
Sbjct: 358 ANQLFGEMGTMGLEPYDETFNFLIEGCAKAGRVEECLSYFEKMIERGLVPSLLAFNKMIA 417
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
CE GE+ +A F + G T+ +L+ GY R + + +Y +M + P
Sbjct: 418 KLCETGEVNQANTFLTRLLDKGFSPDETTYSYLMTGYERDNQIQEVLKLYYEMEYRPLSP 477
Query: 386 EGSTIEVLIGELCDKRRVFEA---LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
LI LC ++ +A L I+K R L P+++ Y LI G E+ A
Sbjct: 478 GLLVFTPLIRSLCHCGKLEQAEKYLRIMKGR----SLNPSQQVYEALIAGHLEKSDTARA 533
Query: 443 LKVQAEMVGKGFEP 456
L++ EM+ KGF P
Sbjct: 534 LQLYNEMISKGFTP 547
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 38/207 (18%), Positives = 84/207 (40%), Gaps = 17/207 (8%)
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+SY +++ + + + +A+ L E + KNVE + E +
Sbjct: 111 WSYCLMVNILVRAQLLNDAQALLESILKKNVE--------------DSSEFLIVDSLLDS 156
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
+ + SS + F LV Y + + + + GF + LI + K
Sbjct: 157 YKI--IVSSPLVFNLLVQAYAKLRLFEIGFKICFYLEEHGFFLSLLSFNTLI-HVVQKSD 213
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ + + ++ ++P E + +I LC+EGK++ + + + GK P + I +
Sbjct: 214 QYPLVWKIYEHMIHKRIYPNEATIRTMINALCKEGKLQMFVDILDRIHGKRCRPLVIINA 273
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQV 489
+ ++EG V++ + K M + +
Sbjct: 274 CMVFRILQEGRVDVGIGILKGMLQKNM 300
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 191/433 (44%), Gaps = 54/433 (12%)
Query: 82 KNNPHLALRFFSFT--QHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDP 139
+ N LAL+ F + H H+ +Y +I+ LSRAR P ++ LR+ + P
Sbjct: 57 QQNIDLALQIFLYAGKSHPGF-THNYDTYHSILFKLSRARAFDPVESLM-ADLRN--SYP 112
Query: 140 KLK----LFEVLVKTYRECG---SAPFVF----DLLIKCCLEVKNIEKIETCV------- 181
+K LF L++ Y G S+ +F D +K +++ + T +
Sbjct: 113 PIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVK-----RSVRSLNTLLNVLIQNQ 167
Query: 182 --DIVRMLM-----SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
D+V + S G++ + TCN L+ + + + S Y++ E+ +
Sbjct: 168 RFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMG-------- 219
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+ PN+ T+ ++ G+ G E + V EM G PD +Y+VLM +C+
Sbjct: 220 --------LVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCK 271
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R EA + ++M +E + V Y +I C+ + A F EM S
Sbjct: 272 LGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSL 331
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+++ C VD A ++ M + P+ + + LI LC + RV EA +
Sbjct: 332 CCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDE-- 389
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
G P+ +Y LI G+CE+G++ EA ++ +M + +P+ Y+ I+G K GNV
Sbjct: 390 FDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNV 449
Query: 475 EMATMLRKEMFEN 487
+ + +EM E+
Sbjct: 450 KEGVRVLEEMLES 462
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 39/214 (18%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
+W +M + C PD S L+ C+E R+ EA KL++E DK ++ YNT+I G C
Sbjct: 351 LWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEF-DKGSIPSLLTYNTLIAGMC 409
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
E GE+ A + +M + ++ T+ L+ G + G+V + V +M
Sbjct: 410 EKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEM---------- 459
Query: 389 TIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV--Q 446
++ G FP + +++ L +GL + GK E+A+K+
Sbjct: 460 --------------------------LESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSM 493
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
A M GK + S E++ G + +G + + +L
Sbjct: 494 AVMNGKVDKESWELFLNKFVGELDKGVLALKELL 527
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G P T +L+ LC K + A +L + GL P +Y ++ G G ME
Sbjct: 184 GITPNIFTCNLLVKALCKKNDIESAYKVLD-EIPAMGLVPNLVTYTTILGGYVARGDMES 242
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
A +V EM+ +G+ P Y+ +DGY K G A + +M +N++
Sbjct: 243 AKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEI 290
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + L+ +EG + ++ E + G P +Y+ L+A CE+ + EA +L
Sbjct: 362 PDNALLSTLIHWLCKEGRVSEARKLFDEFDK-GSIPSLLTYNTLIAGMCEKGELTEAGRL 420
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W++M ++ + + YN +I G + G + EM SG + TF L G +
Sbjct: 421 WDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQK 480
Query: 365 AGDVDSAILV 374
G + AI +
Sbjct: 481 LGKEEDAIKI 490
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 156/359 (43%), Gaps = 54/359 (15%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGI 233
+E+ E V+ +R+ +GL+ V T NA I + + V+ Y I+++ + D G+
Sbjct: 223 VEEAERLVERMRV---QGLAPNVVTFNARISALCKAGRVLDAYRIFQD---MQEDWQHGL 276
Query: 234 GK--------------------------DVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
+ D+ R V ++N + G R G + +
Sbjct: 277 PRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQ 336
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
++ EMA G +P+ Y+Y+++++ C+E + +A ++ +R + DVV Y +++ +
Sbjct: 337 ELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAY 396
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C G +A A EM G +S T+ L+ RAG A + M KG+ +
Sbjct: 397 CSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDT 456
Query: 388 STIEVLIGELCDKRRVFEALDIL-------KARVVKFG---------------LFPTEKS 425
+ ++I LC R+ A+DI+ + + G P + +
Sbjct: 457 AGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQIT 516
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI LC+EG+ +EA K EM+ K P IY FI GY K G +A + ++M
Sbjct: 517 YSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDM 575
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 120/262 (45%), Gaps = 38/262 (14%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P +N L++ RE + VE ++ ++ G +PD ++ ++L+ C+ RM A+++
Sbjct: 108 PTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRV 167
Query: 305 WEEMRDKN---------------------------VEHDVVAYNTIIGGFCEIGEMARAE 337
++ M +N ++V NT++ GFC+ G + AE
Sbjct: 168 FDAMPARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAE 227
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM---CRKGF-EPEGSTIEVL 393
M + G+ + VTF ++ C+AG V A ++ DM + G P+ T +V+
Sbjct: 228 RLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVM 287
Query: 394 IGELCDKRRVFEA---LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+ CD V EA +DI++ G +SY + GL G++ EA ++ EM
Sbjct: 288 LSGFCDAGFVDEARVLVDIMRCG----GFLRRVESYNRWLSGLVRNGRVGEAQELLREMA 343
Query: 451 GKGFEPSLEIYSAFIDGYMKEG 472
+G +P+ Y+ + G KEG
Sbjct: 344 HEGIQPNSYTYNIIVSGLCKEG 365
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 12/258 (4%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V + P+ ++ + G+ + G V +M + GC P +Y++L+ F E+ +
Sbjct: 542 VKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSE 601
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
E KL EM++K + +V+ YN++I FC+ G + +A EM + + + +F+ L+
Sbjct: 602 EIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLI 661
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV---VK 416
YC+ D SA +V++ R + E ++ EL + EA +IL+ + V
Sbjct: 662 KAYCKITDFPSAQMVFDAALRTCGQKE-VLYCLMCTELTTYGKWIEAKNILEMALEMRVS 720
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG--FEPSLEIYSAFIDGYMKEGNV 474
FP Y +I GLCE G+++ A + ++ K F+P+ + ID G
Sbjct: 721 IQSFP----YKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPA--AFMPVIDALGDRGKK 774
Query: 475 EMATMLRKEMFENQVRQE 492
+ ML +M E R +
Sbjct: 775 QDVDMLSAKMMEMADRND 792
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 164/379 (43%), Gaps = 29/379 (7%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF--DLLIKCCLEVKNIEKIETCVDIV 184
+I ALR + +L L E L K G+ P VF +LL++ + +E + D +
Sbjct: 116 LILAALR----ESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAM 171
Query: 185 RM-------LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
+++RG + +AL +V G ++ V G G+ ++
Sbjct: 172 PARNEFSFGILARGYCRAGRSIDAL--KVLDGMPSMNLVVCNTVVAGF---CKEGLVEEA 226
Query: 238 KRVV-RVR-----PNVHTFNALMVGFYREG----AFEKVEDVWVEMARLGCEPDCYSYSV 287
+R+V R+R PNV TFNA + + G A+ +D+ + PD ++ V
Sbjct: 227 ERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDV 286
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
+++ FC+ + EA L + MR V +YN + G G + A+E REM G
Sbjct: 287 MLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEG 346
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
++ +S T+ +V+G C+ G A V N + P+ T L+ C K + A
Sbjct: 347 IQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAAN 406
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
IL K G P +Y L++ L G+ EA ++ M KG+ + IDG
Sbjct: 407 RILDEMAQK-GCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDG 465
Query: 468 YMKEGNVEMATMLRKEMFE 486
+ +++A + M+E
Sbjct: 466 LCRNSRLDVAMDIVDGMWE 484
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 20/193 (10%)
Query: 262 AFEKVEDVWVE----MARLG---------------CEPDCYSYSVLMAVFCEERRMREAE 302
A + V+ +W E + RLG C PD +YS+L++ C+E R EA+
Sbjct: 475 AMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAK 534
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K EM K++ D V Y+T I G+C+ G+ + A + R+M G S+ T+ L+ G+
Sbjct: 535 KKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGF 594
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ + + ++M KG P T LI C + V +A+ +L +++ L P
Sbjct: 595 EEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLD-EMLQNELVPN 653
Query: 423 EKSYMFLIKGLCE 435
S+ LIK C+
Sbjct: 654 ITSFDLLIKAYCK 666
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 82/208 (39%), Gaps = 44/208 (21%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P Y+ L+ E R+ E L++++ + DV N ++ C+ G M A+
Sbjct: 108 PTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRV 167
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F M + +F L GYCRAG A+ V + M P + + +C+
Sbjct: 168 FDAMP----ARNEFSFGILARGYCRAGRSIDALKVLDGM------PSMNLV------VCN 211
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
++ G C+EG +EEA ++ M +G P++
Sbjct: 212 T----------------------------VVAGFCKEGLVEEAERLVERMRVQGLAPNVV 243
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++A I K G V A + ++M E+
Sbjct: 244 TFNARISALCKAGRVLDAYRIFQDMQED 271
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 142/285 (49%), Gaps = 42/285 (14%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ +PN+ ++N ++ + G +++ + ++ EM G PD ++S L+ C+E + E
Sbjct: 231 INCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIE 290
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A+K E M + + D+ + ++I GFC +G++ A+E F M G E +++ L+
Sbjct: 291 AKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIY 350
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL---------IGE--------------- 396
GYC+ +V+ A+ +YN+M R G P+ T VL +G+
Sbjct: 351 GYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPK 410
Query: 397 -----------LCDKRRVFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
LC +FEA+++ LK+ +K + +S+ LI GLC+ K+E A
Sbjct: 411 NLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDI----ESFNCLIDGLCKARKLETA 466
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++ ++ +G +P + Y I+G+ K G V+ A +L + M EN
Sbjct: 467 WELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEEN 511
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 132/281 (46%), Gaps = 42/281 (14%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG--------------------------- 277
P+V T+ +L+ G E + +++ M +LG
Sbjct: 159 PDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKL 218
Query: 278 --------------CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
C+P+ +SY++++ C+ + +EA++L+ EM D+ V DVV ++ +
Sbjct: 219 HQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSAL 278
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I C+ G + A++F M L G+ TF L+ G+C GD+DSA ++ M KG+
Sbjct: 279 IDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGY 338
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
EP+ + VLI C V EA+ L +++ G +P K++ L+KGL GK+ +A
Sbjct: 339 EPDVISYTVLIYGYCKTFNVEEAMK-LYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAK 397
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
K+ + +L I S F+DG K G + A L E+
Sbjct: 398 KLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNEL 438
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 122/247 (49%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ TF +L+ GF G + +++++ M G EPD SY+VL+ +C+ + EA
Sbjct: 303 IVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAM 362
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL+ EM D+ + ++ G G++ A++ F + V + ++G
Sbjct: 363 KLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGL 422
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G + A+ ++N++ + + + LI LC R++ A ++ + ++ + GL P
Sbjct: 423 CKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFE-KLSQEGLQPD 481
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I G C+ G+++ A + M G P+L YSA + G+ K +E L
Sbjct: 482 VVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLH 541
Query: 483 EMFENQV 489
+M + V
Sbjct: 542 KMIQKDV 548
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 118/278 (42%), Gaps = 42/278 (15%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+FN L+ + + +V ++ +M G P+ ++ ++L+ C R+RE +
Sbjct: 93 SFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGI 152
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ DVV Y ++I G C ++ A F M G + VT+ L+ G CR G++
Sbjct: 153 MRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNI 212
Query: 369 DSAI-----------------------------------------LVYNDMCRKGFEPEG 387
+ A+ ++N+M +G P+
Sbjct: 213 NLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDV 272
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI LC + V EA L+ +++ G+ P ++ LI+G C G ++ A ++
Sbjct: 273 VTFSALIDTLCKEGMVIEAKKFLETMMLR-GIVPDLFTFTSLIEGFCLVGDLDSAKELFL 331
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
M KG+EP + Y+ I GY K NVE A L EM
Sbjct: 332 SMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEML 369
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 9/226 (3%)
Query: 245 PNVHTFNALMVGFYR----EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
P+V TFN L+ G+ + + A + VE +W G PD +Y+ ++ C+ + +E
Sbjct: 453 PDVFTFNTLIDGYCKRLKLDSALQLVERMWT----YGIAPDVITYNSVLNGLCKAGKAKE 508
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
+ +EEM K + + YN +I FC+I ++ A M G+ +V+F L++
Sbjct: 509 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIH 568
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G+CR GD+D A L++ + KG+ T +LIG K + A I + K G
Sbjct: 569 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISK-GYK 627
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
P +Y L+ GLC+ ++ A AEM+ KGF PS+ + ++
Sbjct: 628 PDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLN 673
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 195/464 (42%), Gaps = 56/464 (12%)
Query: 31 STPPSDQSHNLIA-TVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQI----ALGLKNNP 85
+ PP+ ++N I +V+ H ++ + +L+ +G+ P + + L P
Sbjct: 101 ACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLA---AGVAPDARTHTVRLKSFCLTGRP 157
Query: 86 HLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFE 145
H+ALR + C ++Y T++ L AR + L + P + F
Sbjct: 158 HVALRLLRSLSERG-CDAKPAAYCTVVRGLYAHGHGYNARHLFDEML-GRDVFPDVATFN 215
Query: 146 VLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWE 205
++ + G LL K ++ RG+S TCN IW
Sbjct: 216 NVLHALCQKGDVMESGALLAK--------------------VLKRGMSANKFTCN--IW- 252
Query: 206 VSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR----VRPNVHTFNALMVGFYREG 261
+ GL D + + V V R V P+V T+N LM G ++
Sbjct: 253 ----------------IRGLCEDGR--LEEAVALVERMGAYVAPDVVTYNTLMRGLCKDS 294
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
++ M GC PD ++Y+ ++ +C+ ++EA +L ++ K D V Y
Sbjct: 295 KVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYC 354
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
++I G C G++ RA E F E ++ V + LV G CR G + A+ V N+M +
Sbjct: 355 SLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEE 414
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G P+ T ++I LC + +A ++ +VK G P ++ LI G C+ K++
Sbjct: 415 GCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVK-GYLPDVFTFNTLIDGYCKRLKLDS 473
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
AL++ M G P + Y++ ++G K G + +EM
Sbjct: 474 ALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMI 517
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 119/243 (48%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P++ +N+L+ G R+G V EM GC PD ++Y++++ C+ + +A
Sbjct: 381 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAA 440
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + K DV +NT+I G+C+ ++ A + M G+ +T+ ++NG
Sbjct: 441 VVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGL 500
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+AG + +M KG P T +LI C ++ EA ++ R+ + GL P
Sbjct: 501 CKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI-VRMCQDGLVPD 559
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
S+ LI G C G ++ A + ++ KG+ + + ++ I Y + N++MA +
Sbjct: 560 AVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFG 619
Query: 483 EMF 485
EM
Sbjct: 620 EMI 622
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 116/242 (47%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+ +L+ G EG E+ +++ E +PD Y+ L+ C + + A ++
Sbjct: 348 PDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQV 407
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EM ++ D+ YN II G C++G ++ A + + G TF L++GYC+
Sbjct: 408 MNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCK 467
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+DSA+ + M G P+ T ++ LC + E + + ++K G P
Sbjct: 468 RLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILK-GCRPNAI 526
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI+ C+ ++EEA V M G P ++ I G+ + G+++ A +L +++
Sbjct: 527 TYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKL 586
Query: 485 FE 486
E
Sbjct: 587 DE 588
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 112/216 (51%), Gaps = 1/216 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V T+N+++ G + G ++V + + EM GC P+ +Y++L+ FC+ ++ EA
Sbjct: 486 IAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEAS 545
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ M + D V++NT+I GFC G++ A F+++ G +++ TF L+ Y
Sbjct: 546 GVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAY 605
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
++ A ++ +M KG++P+ T +L+ LC V A L A ++ G P+
Sbjct: 606 SSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHL-AEMISKGFVPS 664
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
++ ++ L ++ EA+ + MV G P +
Sbjct: 665 MATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEV 700
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 2/231 (0%)
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G Y G ++ EM PD +++ ++ C++ + E+ L ++ + +
Sbjct: 185 GLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSA 244
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
+ N I G CE G + A MG + V VT+ L+ G C+ V A
Sbjct: 245 NKFTCNIWIRGLCEDGRLEEAVALVERMG-AYVAPDVVTYNTLMRGLCKDSKVQEAAQYL 303
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
M +G P+ T +I C + EA ++LK V K G P +Y LI GLC
Sbjct: 304 GRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFK-GFVPDRVTYCSLINGLCA 362
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
EG +E AL++ E K +P L +Y++ + G ++G + A + EM E
Sbjct: 363 EGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVE 413
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 192/432 (44%), Gaps = 54/432 (12%)
Query: 62 LSLCRSG--LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRAR 119
L+L SG L P ++ + +L RFF + + HS+ Y +++ ILS+ R
Sbjct: 103 LALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMR 162
Query: 120 LIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIET 179
G +I + + +LF VLV+ + SA ++K +EV ++++ T
Sbjct: 163 QFGAVWGLIEEMRKENPQLIEPELFVVLVQRF---ASAD-----MVKKAIEV--LDEMPT 212
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG--LDSDATAGIGKDV 237
G E VFG LD+ G KD
Sbjct: 213 ----------------------------------FGLEPDEYVFGCLLDALCKHGSVKDA 238
Query: 238 KRV-----VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
++ +R N+ F +L+ G+ RE + + V V+M G EPD Y+ L++ +
Sbjct: 239 AKLFEDMRLRFPVNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGY 298
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
+M +A L ++MR + E + Y +I C++ M A + F EM E+
Sbjct: 299 ANAGKMADAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADV 358
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ LV+G+C+ G +D LV +DM +KG P T ++ K ++ E L++++
Sbjct: 359 VTYTALVSGFCKWGKIDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELME- 417
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
++ + P Y +I+ C+ G+++EA+++ EM G G P + + I+G +G
Sbjct: 418 KMKQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQG 477
Query: 473 NVEMATMLRKEM 484
+ A KEM
Sbjct: 478 CLLEACDHFKEM 489
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 116/250 (46%), Gaps = 6/250 (2%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V T+ AL+ GF + G +K V +M + G P +Y +MA ++ ++ E +L
Sbjct: 357 DVVTYTALVSGFCKWGKIDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELM 416
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E+M+ D+ YN +I C++GE+ A + EM +G+ + TF ++NG
Sbjct: 417 EKMKQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQ 476
Query: 366 GDVDSAILVYNDMCRKGF--EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G + A + +M +G P+ T+++L+ L +++ A D+ K +
Sbjct: 477 GCLLEACDHFKEMVARGLFSVPQYGTLKLLLNTLLKDKKLEMAKDVWSCITSKGSCELSV 536
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG----YMKEGNVEMATM 479
S+ I L +G +EA EM+ F P + ++ + G Y +E VE+
Sbjct: 537 SSWTIWIHALFSKGYEKEACSYCLEMIELEFMPQPDTFAKLMKGLKKLYHREFAVEITEK 596
Query: 480 LRKEMFENQV 489
+R E ++
Sbjct: 597 VRNMAAEKEM 606
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 127/233 (54%), Gaps = 1/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N +M G + E+ ++ EM RLGC P+ S++ ++ C++ ++ +A ++
Sbjct: 113 PDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQV 172
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM K++ D +Y +I G + G++ A + F+ M SG+ S+VT+ +++G C
Sbjct: 173 FHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCL 232
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A +D A+ ++ M KG P T +LI C + ++ EA +LK R+ G P
Sbjct: 233 AYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLK-RMTDDGHVPDVV 291
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI GLC ++++A + +MV + +P++ + I G K G ++ A
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 114/244 (46%), Gaps = 1/244 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RP+ TFN L+ + G ++ + M G PD +YS L++ C R+ +A
Sbjct: 252 RPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 311
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L E+M + + VV NT+I G C+ G + A E M SG VT+ LV+G+C
Sbjct: 312 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 371
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
RAG + A + +DM +G P T L+ LC R+ EA + A++ G P
Sbjct: 372 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVF-AQMKSSGCAPNL 430
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LI G C G+++ LK+ EMV G P +Y K G A + +E
Sbjct: 431 FTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE 490
Query: 484 MFEN 487
E+
Sbjct: 491 GRES 494
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+N ++ G ++ +++ M GC P +++++L+ C+ ++ EA
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAF 275
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L + M D DVV Y+T+I G C I + A +M + + VT L++G
Sbjct: 276 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 335
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+AG + A V + M G P+ T L+ C + A ++L V + GL P
Sbjct: 336 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR-GLAPN 394
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y L+ GLC+ ++ EA V A+M G P+L Y+A I G+ G V+ L
Sbjct: 395 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 454
Query: 483 EM 484
EM
Sbjct: 455 EM 456
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 132/269 (49%), Gaps = 7/269 (2%)
Query: 225 LDSDATAGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+D A AG D + + + V P+ + +L+ G +F+ +++ +M R GC
Sbjct: 17 IDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGC 76
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P +Y+V++ C+ + EA L ++M + DVV YNT++ G C+ + A
Sbjct: 77 PPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALL 136
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F EM G + + ++ G C+ +D A V+++M K P+ + +LI L
Sbjct: 137 LFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLA 196
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
++ EA + + R++ G+ P+ +Y +I G+C ++EAL++ M KG PS
Sbjct: 197 KAGKLNEAYKLFQ-RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
++ ID + K G ++ A L K M ++
Sbjct: 256 FTFNILIDAHCKRGKLDEAFRLLKRMTDD 284
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 119/255 (46%), Gaps = 11/255 (4%)
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
VKR + +P V T N L+ G + G ++ +V M G PD +Y+ L+ C
Sbjct: 317 VKR--QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ A +L +M + + +VV Y ++ G C+ + A F +M SG + T+
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 434
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA---- 412
L+ G+C AG VD + ++ +M G P+ L ELC R AL+IL+
Sbjct: 435 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494
Query: 413 -RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
R +G ++ Y F + GL E GKME AL +MV G P+ E ++ + G K
Sbjct: 495 LRSEAWG----DEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKS 550
Query: 472 GNVEMATMLRKEMFE 486
G A + +E+ +
Sbjct: 551 GQGGEARAVLEEIMD 565
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 120/246 (48%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N ++ + G E+ D+ +M G PD +Y+ +M C+ R+ EA L
Sbjct: 78 PSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLL 137
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM + ++NTII G C+ ++ +A + F EM + S ++ L++G +
Sbjct: 138 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAK 197
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG ++ A ++ M G P T V+I +C + EAL++ K+ K G P+
Sbjct: 198 AGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK-GCRPSRF 256
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI C+ GK++EA ++ M G P + YS I G V+ A L ++M
Sbjct: 257 TFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 316
Query: 485 FENQVR 490
+ Q +
Sbjct: 317 VKRQCK 322
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 175/432 (40%), Gaps = 76/432 (17%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRS---PEN----------------DPKLKLFEVL 147
SY +I L++A + AR++ + L S P D +LF +
Sbjct: 12 SYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
+ R C +P ++++I + +E E C D+++ ++ G V T N ++ +
Sbjct: 72 NR--RGCPPSPVTYNVMIDASCKRGMLE--EAC-DLIKKMIEDGHVPDVVTYNTVMDGLC 126
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
+ V ++ E+ L PN + N +++G ++ ++
Sbjct: 127 KSSRVEEALLLFNEMERLG----------------CTPNRRSHNTIILGLCQQSKIDQAC 170
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
V+ EM PD +SY +L+ + ++ EA KL++ M D + V YN +I G
Sbjct: 171 QVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGM 230
Query: 328 CEIGEMARAEEFFREMGLSGVESSS----------------------------------- 352
C + A E F+ M G S
Sbjct: 231 CLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDV 290
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ L++G C VD A + DM ++ +P T LI LC R+ EA ++L A
Sbjct: 291 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 350
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+V G P +Y L+ G C G+ E A ++ ++MV +G P++ Y+A + G K
Sbjct: 351 -MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 409
Query: 473 NVEMATMLRKEM 484
+ A + +M
Sbjct: 410 RLPEACGVFAQM 421
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 1/210 (0%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +SY +L+ + ++ +A L++++ V VAY ++I G C A E
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
F +M G S VT+ +++ C+ G ++ A + M G P+ T ++ LC
Sbjct: 68 FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
RV EAL +L + + G P +S+ +I GLC++ K+++A +V EM K P
Sbjct: 128 SSRVEEAL-LLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSW 186
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
Y IDG K G + A L + M ++ +
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFQRMLDSGI 216
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 1/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ ++ L+ G + G +++ ++ G P +Y+ L+ C +A
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ +M + V YN +I C+ G + A + ++M G VT+ +++G
Sbjct: 66 ELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++ V+ A+L++N+M R G P + +I LC + ++ +A + K + P
Sbjct: 126 CKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAK-DIPPD 184
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY LI GL + GK+ EA K+ M+ G PS Y+ I G ++ A L K
Sbjct: 185 SWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFK 244
Query: 483 EMFENQVR 490
M R
Sbjct: 245 SMRSKGCR 252
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 1/177 (0%)
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M ++NV D +Y +I G + G++ A F+++ SGV S+V + L++G C A
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
D A ++ DM R+G P T V+I C + + EA D++K ++++ G P +Y
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIK-KMIEDGHVPDVVTYN 119
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ GLC+ ++EEAL + EM G P+ ++ I G ++ ++ A + EM
Sbjct: 120 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 110/271 (40%), Gaps = 39/271 (14%)
Query: 98 KSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSA 157
K CK ++ + T+IH L +A I AR+V+ A+ S P + + LV + G
Sbjct: 318 KRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD-AMVSSGQSPDVVTYNTLVHGHCRAG-- 374
Query: 158 PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
+ E +++ +++RGL+ V T AL+ + + +
Sbjct: 375 ------------------QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 416
Query: 218 IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
++ + + S A PN+ T+ AL++GF G + ++ EM G
Sbjct: 417 VFAQ---MKSSGCA-------------PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 460
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD--KNVEHDVVAYNTIIGGFCEIGEMAR 335
PD Y L A C+ R A ++ E R+ ++ Y + G E G+M
Sbjct: 461 ISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEM 520
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
A F R+M G + LV G C++G
Sbjct: 521 ALGFVRDMVRGGQLPAPERCASLVAGLCKSG 551
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 126/255 (49%), Gaps = 8/255 (3%)
Query: 231 AGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE-MARLGCEPDCYSYSVLM 289
A +G VK+ RV + TF L+ G + D+ + M LGC PD +SY+ L+
Sbjct: 113 AALGNVVKKGFRV--DAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLL 170
Query: 290 AVFCEERRMREAEKLWEEMRDK---NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
C+E R +EA +L M D DVV+YNT++ GF + G+ +A + EM
Sbjct: 171 KGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDR 230
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+ VT+ ++ C+A +D A+ V N M + G P+ T ++ C + EA
Sbjct: 231 GILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 290
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ LK ++ G+ P +Y L+ LC+ G+ EA K+ M +G EP + Y +
Sbjct: 291 IGTLK-KMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQ 349
Query: 467 GYMKEGN-VEMATML 480
GY +G VEM +L
Sbjct: 350 GYATKGALVEMHALL 364
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 126/242 (52%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V ++N ++ GF++EG +K + EM G PD +YS ++A C+ + M +A ++
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEV 258
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M V D + YN+I+ G+C G+ A ++M GVE + VT+ L+N C+
Sbjct: 259 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G A +++ M ++G EP+ +T L+ K + E +L +V+ G+ P
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDL-MVRNGIQPDHH 377
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ LI ++ K+++A+ V ++M G P++ Y ID K G+V+ A + ++M
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 437
Query: 485 FE 486
+
Sbjct: 438 ID 439
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 125/247 (50%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T+ L+ G+ +GA ++ + M R G +PD + +++L+ + ++ ++ +A
Sbjct: 337 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 396
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ +MR + +VV Y T+I C+ G + A +F +M G+ + + + L++G
Sbjct: 397 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C D A + +M +G +I C + RV E+ + +V+ G+ P
Sbjct: 457 CTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL-MVRIGVKPD 515
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI G C GKM+EA K+ A MV G +P + Y I+GY + ++ A L K
Sbjct: 516 IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFK 575
Query: 483 EMFENQV 489
EM + V
Sbjct: 576 EMVSSGV 582
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 124/247 (50%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+V T+++++ + A +K +V M + G PDC +Y+ ++ +C + +EA
Sbjct: 232 ILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 291
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++MR VE +VV Y++++ C+ G A + F M G+E T+ L+ GY
Sbjct: 292 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGY 351
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G + + + M R G +P+ +LI + +V +A+ ++ +++ + GL P
Sbjct: 352 ATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM-LVFSKMRQHGLNPN 410
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y +I LC+ G +++A+ +M+ +G P++ +Y++ I G + A L
Sbjct: 411 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELIL 470
Query: 483 EMFENQV 489
EM + +
Sbjct: 471 EMLDRGI 477
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 169/388 (43%), Gaps = 26/388 (6%)
Query: 100 LCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP- 158
LCK+ S+ A I R + P R L+ L L+ G P
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPD 375
Query: 159 -FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
VF++LI C K EK++ + + + GL+ V C + +V G +
Sbjct: 376 HHVFNILI--CAYAKQ-EKVDQAMLVFSKMRQHGLNPNV-VCYGTVIDVLCKSGSVDDAM 431
Query: 218 IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
+Y E +D T PN+ + +L+ G ++K E++ +EM G
Sbjct: 432 LYFEQM-IDEGLT--------------PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
+ ++ ++ C+E R+ E+EKL++ M V+ D++ YNT+I G C G+M A
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+ M GV+ VT+ L+NGYCR +D A+ ++ +M G P T +++ L
Sbjct: 537 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
RR A + L + K G +Y ++ GLC+ +EAL++ + +
Sbjct: 597 FHTRRTAAAKE-LYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE 655
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMF 485
++ I +K G ++ A K++F
Sbjct: 656 TRTFNIMIGALLKCGRMDEA----KDLF 679
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 116/242 (47%), Gaps = 1/242 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ + V+P++ T+N L+ G G ++ + M +G +PD +Y L+ +C
Sbjct: 505 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRV 564
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
RM +A L++EM V +++ YN I+ G A A+E + + SG + T+
Sbjct: 565 SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTY 624
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++G C+ D A+ ++ ++C + E T ++IG L R+ EA D+ A
Sbjct: 625 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA 684
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
GL P ++Y + + L E+G +EE + M G + ++ + ++ G++
Sbjct: 685 N-GLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDIT 743
Query: 476 MA 477
A
Sbjct: 744 RA 745
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 36/285 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ T+N+++ G+ G ++ +M G EP+ +YS LM C+ R EA
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+++ M + +E D+ Y T++ G+ G + M +G++ F L+ Y
Sbjct: 327 KIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 386
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ VD A+LV++ M + G P +I LC V +A+ + +++ GL P
Sbjct: 387 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM-LYFEQMIDEGLTPN 445
Query: 423 EKSYMFLIKGLC-----------------------------------EEGKMEEALKVQA 447
Y LI GLC +EG++ E+ K+
Sbjct: 446 IIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 505
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
MV G +P + Y+ IDG G ++ AT L M V+ +
Sbjct: 506 LMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 550
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 10/175 (5%)
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
VA ++ MARA G V + T+ L+ CRAG +D +
Sbjct: 65 VARHSPAAAVSRYNRMARA-------GAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGN 117
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
+ +KGF + T L+ LC +R +A+DI+ R+ + G P SY L+KGLC+E
Sbjct: 118 VVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDEN 177
Query: 438 KMEEALKV---QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ +EAL++ A+ G G P + Y+ ++G+ KEG+ + A EM + +
Sbjct: 178 RSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGI 232
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 127/251 (50%), Gaps = 2/251 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ + V V TF LM + R G + + M C+PD ++S+L+++ C E
Sbjct: 118 DLMKARNVDVTVETFLILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRE 177
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
RR +A++ ++ ++DK E DV+ Y ++ G+C G ++ AE F EM ++G++ + T+
Sbjct: 178 RRASQAQEFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTY 236
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++ CR G + A ++ +M G +P T L+ R + L + ++
Sbjct: 237 SIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYN-QMK 295
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ G P +Y FLI+ C++ +E+A+KV M KG P+ ++ K G+V
Sbjct: 296 RLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVN 355
Query: 476 MATMLRKEMFE 486
A + K+M E
Sbjct: 356 AAHRMYKKMKE 366
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 107/211 (50%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN T+N+LM + G EKV V+ +M RLGCEPD +Y+ L+ C++ + +A K
Sbjct: 265 QPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIK 324
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ M K + +NT+ G ++G++ A +++M E+++VT+ L+ +
Sbjct: 325 VIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFV 384
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ D + + +M EP +T +VLI C A + + + L P+
Sbjct: 385 ASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKCLRPSL 444
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
Y +++ L + G++++ ++ +MV +GF
Sbjct: 445 PVYDMVLQQLRKAGQLKKHEELVEKMVDRGF 475
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 2/168 (1%)
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
AYN ++ ++ A F M V+ + TF L+ Y RAG AI +N M
Sbjct: 96 AYNEMVDFSGQVMMFDVAWYFIDLMKARNVDVTVETFLILMRRYVRAGLAAEAIHAFNRM 155
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+P+ +LI LC +RR +A + + KF P Y L++G C G
Sbjct: 156 EDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKDKFE--PDVIVYTNLVRGWCRAGN 213
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ EA +V EM G +P++ YS ID + G + A + EM +
Sbjct: 214 ISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLD 261
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 177/403 (43%), Gaps = 38/403 (9%)
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVK 149
RFF + K S+++Y ++H + + D++ + + + + P +F +
Sbjct: 328 RFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGIS-PNHHIFNIFFS 386
Query: 150 TYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG 209
Y +CG I+ +DI + +GLS + ALI + +
Sbjct: 387 AYAKCGI--------------------IDKAMDIFNKMRQQGLSPDAVSYGALIDALCK- 425
Query: 210 KGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDV 269
G DA + + V P++ F++L+ G +EKVE++
Sbjct: 426 -------------LGRVDDAEVKFNQMINE--GVTPDIVVFSSLVYGLCTVDKWEKVEEL 470
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+ EM +G P+ ++ ++ C+E R+ E ++L + + V DV++YNT+I G C
Sbjct: 471 FFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCL 530
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G + A + M G++ S ++ L++GYC+AG +DSA + M G P T
Sbjct: 531 AGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVT 590
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
++ L +R EA + L ++ G +Y ++ GLC+ ++EA+K+ +
Sbjct: 591 YNTILHGLFQTKRFSEAKE-LYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNL 649
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
KG + ++ ++ I +K G E A L + N + Q
Sbjct: 650 CSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQN 692
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 120/235 (51%), Gaps = 1/235 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VRP+V ++N L+ G G ++ + M +G +PD +SY+ L+ +C+ R+ A
Sbjct: 514 VRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAY 573
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +M + VV YNTI+ G + + A+E + M SG + T+ ++NG
Sbjct: 574 SHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGL 633
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C++ VD AI ++ ++C KG + T ++IG L R +A+D+ A + GL
Sbjct: 634 CKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAA-IPANGLVQN 692
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y +++ L EEG +EE + + M G P+ ++ +A + + G++ A
Sbjct: 693 VVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 747
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 117/232 (50%), Gaps = 1/232 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+PN+ T+N L+ G+ G +++V + EM+ G +P+C +Y L+ C+ R REA
Sbjct: 269 VKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREAR 328
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ M K ++ V Y ++ G+ G ++ + M +G+ + F + Y
Sbjct: 329 FFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAY 388
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ G +D A+ ++N M ++G P+ + LI LC RV +A ++ +++ G+ P
Sbjct: 389 AKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDA-EVKFNQMINEGVTPD 447
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ L+ GLC K E+ ++ EM+ G P++ ++ + KEG V
Sbjct: 448 IVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRV 499
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 116/245 (47%), Gaps = 1/245 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV +++ ++ GF+ EG +K ++++EM G PD +Y+ ++ C+ + AE +
Sbjct: 201 PNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAV 260
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++M D V+ ++ YN +I G+ IG+ EM G + + T+ L+N C+
Sbjct: 261 FQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCK 320
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G A ++ M KG +P +T +++ K + E D+L V G+ P
Sbjct: 321 NGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVAN-GISPNHH 379
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ + G +++A+ + +M +G P Y A ID K G V+ A + +M
Sbjct: 380 IFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQM 439
Query: 485 FENQV 489
V
Sbjct: 440 INEGV 444
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 113/236 (47%), Gaps = 6/236 (2%)
Query: 251 NALMVGFYREGAFEKVEDVWVE-MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
N L+ G + DV ++ M LGC PD SY++L+ C E+R EA +L M
Sbjct: 133 NQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMA 192
Query: 310 DKNV---EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
D V +VV+Y+T+I GF G++ + F EM G+ VT+ +++G C+A
Sbjct: 193 DDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQ 252
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
D A V+ M G +P T LI + E + +L+ + G P +Y
Sbjct: 253 LFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLE-EMSAGGPKPNCCTY 311
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV-EMATMLR 481
L+ LC+ G+ EA M+GKG +PS+ Y + GY +G + EM +L
Sbjct: 312 GSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLN 367
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 9/251 (3%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMAR---LGCEPDCYSYSVLMAVFCEERRMREA 301
P+ ++N L+ G E E+ ++ MA C P+ SYS ++ F E ++ +
Sbjct: 163 PDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKP 222
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L+ EM D+ + DVV Y T+I G C+ RAE F++M +GV+ + T+ L++G
Sbjct: 223 YNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHG 282
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
Y G + + +M G +P T L+ LC R EA + + K G+ P
Sbjct: 283 YLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGK-GIKP 341
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ +Y ++ G +G + E + MV G P+ I++ F Y K G ++ A
Sbjct: 342 SVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAM--- 398
Query: 482 KEMFENQVRQE 492
++F N++RQ+
Sbjct: 399 -DIF-NKMRQQ 407
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 1/188 (0%)
Query: 290 AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
A+ + RR+ +A L+ EM K + DVV YNTI+ G + G + A+E + M S +
Sbjct: 799 ALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQ 858
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
+ T+ ++NG C++ VD A ++ +C KG + T ++IG L R +A+D+
Sbjct: 859 MNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDL 918
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
A + GL P +Y + + L EEG +EE + M G + +A + +
Sbjct: 919 FAA-IPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLL 977
Query: 470 KEGNVEMA 477
+ G++ A
Sbjct: 978 QRGDISRA 985
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTII-------GGFCEIGEMARAEEFFREMGLS---GVE 349
+A KL++E+ VVA+N ++ G E F M V
Sbjct: 32 DALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVA 91
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
+ T+ L+ +CR G ++ + + + G+ + I L+ LCD +RV EA+D+
Sbjct: 92 PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF---EPSLEIYSAFID 466
L R+ + G P SY L+KGLC E + EEAL++ M P++ YS I+
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211
Query: 467 GYMKEGNVEMATMLRKEMFENQV 489
G+ EG V+ L EM + +
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGI 234
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 120/275 (43%), Gaps = 27/275 (9%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P V T+N ++ G ++ F + +++++ M G + D Y+Y++++ C+ + EA
Sbjct: 584 ITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAI 643
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+++ + K ++ +++ +N +IG + G A + F + +G+ + VT+ +V
Sbjct: 644 KMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENL 703
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKAR------ 413
G ++ +++ M + G P + L+ L D R L L R
Sbjct: 704 IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEA 763
Query: 414 ---VVKFGLFPTE----------KSYMFLIKG-----LCEEGKMEEALKVQAEMVGKGFE 455
+ +F ++ K Y L + + + ++++A + EM+ KG
Sbjct: 764 STTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLT 823
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
P + Y+ + G + G A L M ++ +
Sbjct: 824 PDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQ 858
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 130/291 (44%), Gaps = 33/291 (11%)
Query: 141 LKLFEVLVKTYRECGSAPF--VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
L+ F+ L + G+AP + + L++ L +I + + L R SV+ ST
Sbjct: 709 LEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGA---YLSKLDERNFSVEAST 765
Query: 199 CNALIWEVS------RGKGVISGYEIYREVFGLDSDATAGIGK-----DVKRVVR----- 242
+ LI S K + Y I E ++++A I K D + R
Sbjct: 766 TSMLISIFSSDEYQHHAKSLPKKYRILNE-----ANSSALIKKARRIDDAYSLFREMLMK 820
Query: 243 -VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ P+V T+N ++ G ++ G F + +++++ M + + Y+Y++++ C+ + EA
Sbjct: 821 GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEA 880
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+++ + K ++ +++ +N +IG + G A + F + +G+ VT+ +
Sbjct: 881 FKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAEN 940
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
G ++ ++ M + G + + L+ RR+ + DI +A
Sbjct: 941 LIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALV------RRLLQRGDISRA 985
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/224 (18%), Positives = 88/224 (39%), Gaps = 16/224 (7%)
Query: 171 VKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDAT 230
+K +I+ + R ++ +GL+ V T N ++ + + E+Y +
Sbjct: 801 IKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMIN------ 854
Query: 231 AGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
R + N++T+N ++ G + ++ ++ + G + + ++++++
Sbjct: 855 ----------SRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIG 904
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+ R +A L+ + + DVV Y + E G + + F M SG
Sbjct: 905 ALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPL 964
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
S LV + GD+ A + + K F E ST LI
Sbjct: 965 DSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELI 1008
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/120 (20%), Positives = 50/120 (41%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ TFN ++ + G E D++ + G PD +Y ++ EE + E + L+
Sbjct: 895 NIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLF 954
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M D N ++ + G+++RA + ++ + T L++ + R
Sbjct: 955 LTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRG 1014
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 186/430 (43%), Gaps = 43/430 (10%)
Query: 63 SLCRSGL--TPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARL 120
+L +SGL +P + +N LA RFF +++ + +HS+ +Y +I ++ R
Sbjct: 55 ALDQSGLRVSPEVVEDVLYRFRNAGLLAYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQ 114
Query: 121 IGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETC 180
D+I ++ K+ E R+ A +K++
Sbjct: 115 YKLMWDLINAMMKK-----KMLNVETFCIVMRKYARA-----------------QKVDEA 152
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
+ ++ L + N L+ + + K V EI+ + +D
Sbjct: 153 IYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEIFENM------------RD---- 196
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
R P+ T++ L+ G+ +E K +V+ EM G PD +YS+++ + C+ R+ E
Sbjct: 197 -RFTPDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMVDILCKAGRVDE 255
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A + M + Y+ ++ + + A + F EM SG+++ F L+
Sbjct: 256 ALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKADVAVFNSLIG 315
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
+C+ + + V +M KG P + +++ L D+ EA D+ + +++K
Sbjct: 316 AFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGEKDEAFDVFR-KMIKV-CE 373
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y +IK CE+ +ME A KV M KG PS+ +S I+G +E N + A +L
Sbjct: 374 PDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEEPNTQKACVL 433
Query: 481 RKEMFENQVR 490
+EM E +R
Sbjct: 434 LEEMIEMGIR 443
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 137/330 (41%), Gaps = 47/330 (14%)
Query: 36 DQSHNLIA--TVVSLLTHHRSKSRWNHLLSLCRSGLTPTQ--FSQIALGLKNNPHLALR- 90
D NL+A ++S L ++ + + R TP +S + G P+L
Sbjct: 163 DLPPNLVAFNGLLSALCKSKNVRKAQEIFENMRDRFTPDSKTYSILLEGWGKEPNLPKAR 222
Query: 91 --FFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV 148
F SL + +Y+ ++ IL +A + A ++R DP +
Sbjct: 223 EVFREMVDAGSL--PDIVTYSIMVDILCKAGRVDEALGIVRSM------DPSI------- 267
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
C F++ +L+ ++E VD + G+ V+ N+LI +
Sbjct: 268 -----CKPTTFIYSVLVHT---YGTETRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCK 319
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVED 268
+ + Y + +E+ + G V PN + N ++ G ++ D
Sbjct: 320 TNRMKNVYRVLKEM------KSKG----------VTPNSKSCNIILRHLIDRGEKDEAFD 363
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
V+ +M ++ CEPD +Y++++ +FCE++ M A+K+W+ MR K V + ++ +I G C
Sbjct: 364 VFRKMIKV-CEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLC 422
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHL 358
E +A EM G+ S TF L
Sbjct: 423 EEPNTQKACVLLEEMIEMGIRPSGATFGRL 452
>gi|222624963|gb|EEE59095.1| hypothetical protein OsJ_10946 [Oryza sativa Japonica Group]
Length = 318
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 121/243 (49%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P + L+ F F KV + M G PD Y ++ + EA
Sbjct: 61 VPPQLDAVADLVAAFSAAANFGKVSETLHLMIAAGSVPDTVIYQRIIHGLFAHKMGSEAL 120
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ E++ + D V Y T I G C++G + A + + EM G+E + + LV Y
Sbjct: 121 RVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGMEPNEYAYCSLVAYY 180
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+AGD + A VY++M KG + + +L+ C RV EAL + + +VK G+
Sbjct: 181 CKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMFE-EMVKKGIEHD 239
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI+GLC+ G++ EA++V +++ G EPS+ ++ ID +EG V+ A L K
Sbjct: 240 VITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEEGQVDAAVELLK 299
Query: 483 EMF 485
F
Sbjct: 300 PFF 302
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 133/299 (44%), Gaps = 15/299 (5%)
Query: 128 IRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRML 187
+R ALR+ D +LF + G A V L+ C E + ++ + D R
Sbjct: 1 MRSALRAARPDLVFRLFSAFSSSPDFPGDAATVAFLVRACSAEGRPLDGLRLLRDGARRG 60
Query: 188 MSRGLSVKVSTCNALIWEVSRGK-----------GVISGYEIY-REVFGLDSDATAGIGK 235
+ L A + GK G + IY R + GL +
Sbjct: 61 VPPQLDAVADLVAAFSAAANFGKVSETLHLMIAAGSVPDTVIYQRIIHGLFAHKMGSEAL 120
Query: 236 DVKRVVRVRP-NVH--TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
V +++R NV T+ + G + G ++ +W EM G EP+ Y+Y L+A +
Sbjct: 121 RVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGMEPNEYAYCSLVAYY 180
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C+ A K+++EM K ++ V+ N ++ GFC G + A F EM G+E
Sbjct: 181 CKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHDV 240
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+T+ L+ G C+AG + AI VY + G EP ST LI +C++ +V A+++LK
Sbjct: 241 ITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEEGQVDAAVELLK 299
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 83/219 (37%), Gaps = 36/219 (16%)
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
AR G P + + L+A F + + M D V Y II G
Sbjct: 57 ARRGVPPQLDAVADLVAAFSAAANFGKVSETLHLMIAAGSVPDTVIYQRIIHGLFAHKMG 116
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+ A F E+ L G +VT+ ++G C+ G +D A ++N+M KG E
Sbjct: 117 SEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGME--------- 167
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
P E +Y L+ C+ G E A KV EM+GKG
Sbjct: 168 ---------------------------PNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKG 200
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ S + + G+ G V+ A + +EM + + +
Sbjct: 201 LKESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHD 239
>gi|449532274|ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 394
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 137/256 (53%), Gaps = 3/256 (1%)
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL-GCEPDCYS 284
D DA G+ ++++ V+PNV TF L+ G ++ + +M ++ +P+
Sbjct: 102 DLDAVWGVFDEMQKR-GVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASI 160
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+ L+ FC + A KL EEM NV+ Y+T+I + G + REMG
Sbjct: 161 YTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMG 220
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
+G + +VT+ ++NG+C+ D++SA V ++M KG +P+ + +IG LC + ++
Sbjct: 221 ENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLD 280
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+A+D+L+ + + G P SY + GLCE +++EA + EM+ KG+ P E +
Sbjct: 281 KAMDLLE-DMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKL 339
Query: 465 IDGYMKEGNVEMATML 480
+D +E N+E+ M+
Sbjct: 340 VDRLCQECNMELLWMI 355
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 119/244 (48%), Gaps = 3/244 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R + V + N+L+ + EK+ V+V+++ G PD ++++L+ C +
Sbjct: 48 RCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNYG-SPDACTFNILIHAACLCGDLDAV 106
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-GLSGVESSSVTFEHLVN 360
+++EM+ + V+ +VV + T+I G ++ A +M + ++ ++ + L+
Sbjct: 107 WGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIK 166
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G+C G+++ A + +M + + LI L R E DIL+ + + G
Sbjct: 167 GFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILR-EMGENGCK 225
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y +I G C+E +E A +V EMV KG +P + ++ I KEG ++ A L
Sbjct: 226 PDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDL 285
Query: 481 RKEM 484
++M
Sbjct: 286 LEDM 289
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ T+NA++ G +E E V EM GC+PD +S++ ++ C+E ++ +A
Sbjct: 225 KPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMD 284
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L E+M + DV++Y I G CE+ ++ A EM G + + LV+ C
Sbjct: 285 LLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLC 344
Query: 364 RAGDVDSAILVYNDMCR 380
+ +++ ++ N + R
Sbjct: 345 QECNMELLWMILNSLGR 361
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 1/192 (0%)
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A +++E + + V + N+++ + ++ + + F ++ G + TF L++
Sbjct: 37 AFQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNYG-SPDACTFNILIH 95
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
C GD+D+ V+++M ++G +P T LI L ++ EAL + + V + +
Sbjct: 96 AACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIK 155
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P Y LIKG C G++ A K++ EMV + +YS I K G E + +
Sbjct: 156 PNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDI 215
Query: 481 RKEMFENQVRQE 492
+EM EN + +
Sbjct: 216 LREMGENGCKPD 227
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 3/255 (1%)
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
I + +K+ R P+ F ++ + R ++ V+ + C+ S + L+A
Sbjct: 4 ILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKSVNSLLAAL 63
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
+ R++ + +++ ++ + D +N +I C G++ F EM GV+ +
Sbjct: 64 LKNRQLEKMTQVFVDISNYG-SPDACTFNILIHAACLCGDLDAVWGVFDEMQKRGVKPNV 122
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCR-KGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
VTF L+ G + A+ + DM + +P S LI C + A LK
Sbjct: 123 VTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFAFK-LK 181
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+V + Y LI L + G+ EE + EM G +P Y+A I+G+ KE
Sbjct: 182 EEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKE 241
Query: 472 GNVEMATMLRKEMFE 486
++E A + EM E
Sbjct: 242 NDLESAHRVMDEMVE 256
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 136/553 (24%), Positives = 228/553 (41%), Gaps = 96/553 (17%)
Query: 10 IFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGL 69
+FS S P+P+ SQ + T P L V LL +R ++ L SL RS
Sbjct: 31 LFSAS-TDPEPE--SQPEQAPPTNPVTGDEKLRNLRV-LLQQNRIETARGVLSSLLRSDS 86
Query: 70 TPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR 129
TP +P FS + KH S Y + +L+ +++I A D+
Sbjct: 87 TPFA----------SPKELFSAFSLSSPS--LKHDFS-YLLLSVLLNESKMISEAADLF- 132
Query: 130 VALRS----PENDPKLKLFEVLVKTYR--------------ECGSAPFVFDLLIKCCLEV 171
ALR+ P +D L + LVKT + + + F++ I+ +++
Sbjct: 133 FALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKL 192
Query: 172 KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG------- 224
++ K +++ + + V N LI + +GK + +++ E+
Sbjct: 193 SDVGK---GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSL 249
Query: 225 ------LDSDATAGIG------KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
+D AG ++ + + P++ TFN L+ G ++ G E E+V E
Sbjct: 250 ITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKE 309
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M LG PD +++S+L + + A ++E D V+ + + ++ C+ G+
Sbjct: 310 MKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369
Query: 333 MARAEEFF-REMGLSGVESSSVTFEHLVNGYCRAGDVDSAI---------------LVYN 376
+ +AEE REM G+ + V + +++GYCR GD+ A L YN
Sbjct: 370 IEKAEEILGREMA-KGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428
Query: 377 DMCR--------------------KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
+ R KG P T +LIG K + DILK +
Sbjct: 429 CLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILK-EMED 487
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G P SY LI LC+ K+ EA V+ +M +G P + IY+ IDG +G +E
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIED 547
Query: 477 ATMLRKEMFENQV 489
A KEM + +
Sbjct: 548 AFRFSKEMLKKGI 560
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 159/348 (45%), Gaps = 22/348 (6%)
Query: 145 EVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
E ++K ++ G P F F +L + EK E + + + G+ + TC+ L
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDG---YSSNEKAEAALGVYETAVDSGVKMNAYTCSIL 360
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
+ + + + EI +G+++ + + PN +N ++ G+ R+G
Sbjct: 361 LNALCKEGKIEKAEEI--------------LGREMAK--GLVPNEVIYNTMIDGYCRKGD 404
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
M + G +PD +Y+ L+ FCE M AEK +M+ K V V YN
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNI 464
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+IGG+ E + + +EM +G + V++ L+N C+ + A +V DM +G
Sbjct: 465 LIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRG 524
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
P+ +LI C K ++ +A K ++K G+ +Y LI GL GK+ EA
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSK-EMLKKGIELNLVTYNTLIDGLSMTGKLSEA 583
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+ E+ KG +P + Y++ I GY GNV+ L +EM + ++
Sbjct: 584 EDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 127/250 (50%), Gaps = 11/250 (4%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+N L+ G+ R+ F+K D+ EM G P+ SY L+ C+ ++ EA+
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +M D+ V V YN +I G C G++ A F +EM G+E + VT+ L++G
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI---GELCDKRRVFEALDILKARVVKFGL 419
G + A + ++ RKG +P+ T LI G + +R + +K + G+
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK----RSGI 630
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
PT K+Y LI LC + +E ++ EM +P L +Y+ + Y G++E A
Sbjct: 631 KPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFN 686
Query: 480 LRKEMFENQV 489
L+K+M E +
Sbjct: 687 LQKQMIEKSI 696
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 160/352 (45%), Gaps = 41/352 (11%)
Query: 142 KLFEVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTC 199
K F++L K + G+ P V + LI C K + +E + + R + RG+S KV
Sbjct: 477 KCFDIL-KEMEDNGTMPNVVSYGTLINCL--CKGSKLLEAQI-VKRDMEDRGVSPKVRIY 532
Query: 200 NALIWEV-SRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
N LI S+GK + + +E+ +K+ + + N+ T+N L+ G
Sbjct: 533 NMLIDGCCSKGK-IEDAFRFSKEM--------------LKKGIEL--NLVTYNTLIDGLS 575
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
G + ED+ +E++R G +PD ++Y+ L++ + ++ L+EEM+ ++ +
Sbjct: 576 MTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLK 635
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
Y+ +I C + E F EM L + + + +++ Y GD++ A + M
Sbjct: 636 TYHLLIS-LCTKEGIELTERLFGEMSL---KPDLLVYNGVLHCYAVHGDMEKAFNLQKQM 691
Query: 379 CRKGFEPEGSTIEVLI------GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
K + +T LI G+LC+ R + +D + AR ++ P +Y ++KG
Sbjct: 692 IEKSIGLDKTTYNSLILGQLKVGKLCEVRSL---IDEMNAREME----PEADTYNIIVKG 744
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
CE A EM KGF + I + + G +E + A ++ EM
Sbjct: 745 HCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 158/353 (44%), Gaps = 56/353 (15%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
SY T+I+ L + + A+ +++ + PK++++ +L+
Sbjct: 496 SYGTLINCLCKGSKLLEAQ-IVKRDMEDRGVSPKVRIYNMLIDG---------------- 538
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
CC + KIE + ++ +G+ + + T N LI +S + ++ E+
Sbjct: 539 CC----SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEI---- 590
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
+ G+ +P+V T+N+L+ G+ G ++ ++ EM R G +P +Y
Sbjct: 591 --SRKGL----------KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
+L+++ C + + E+L+ EM +++ D++ YN ++ + G+M +A ++M
Sbjct: 639 LLISL-CTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK 694
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
+ T+ L+ G + G + + ++M + EPE T +++ C E
Sbjct: 695 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHC------EV 748
Query: 407 LDILKARVVKFGLFPTEKSYMF-------LIKGLCEEGKMEEALKVQAEMVGK 452
D + A V + EK ++ L+ GL EE + +EA V +EM G+
Sbjct: 749 KDYMSAYVWYREM--QEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGR 799
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 183/425 (43%), Gaps = 53/425 (12%)
Query: 71 PTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRV 130
P F ++ ++ P +ALRFF + + K S + I+ IL L+ A V+
Sbjct: 85 PHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMER 144
Query: 131 ALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSR 190
+ + + +VL+ + C VFD +I+ L + ++ C I+R+L
Sbjct: 145 VVSFEMHG----VVDVLIAGHVXC---LLVFDKMIRNGL----LPDVKNCNRILRVLRDE 193
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTF 250
L +S+ K V E FG ++P V T+
Sbjct: 194 NL-------------LSKAKNVYG----MMEQFG------------------IKPTVVTY 218
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
N ++ + +EG ++ ++ EM GC P+ +Y+VL+ ++ + +A+ L EEM +
Sbjct: 219 NTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLN 278
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
+ YN +I GFC+ G A + EM + T+ L+ G C+ V
Sbjct: 279 SGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTG 338
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA---LDILKARVVKFGLFPTEKSYM 427
L ++DM + F P+ + L+ C + EA D LK R L PT +Y
Sbjct: 339 VRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCR----DLVPTVITYN 394
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
LI GLC G ++ AL+++ EM +G P + Y+ ++G K G V MA EM
Sbjct: 395 TLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSK 454
Query: 488 QVRQE 492
++ +
Sbjct: 455 GLKPD 459
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 152/333 (45%), Gaps = 20/333 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA---- 231
++E ++ +++ GL+V T N LI + + +++ E+ + T
Sbjct: 265 ELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYN 324
Query: 232 ----GIGKDVKRV-VRVR----------PNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
G+ K V+ VR+R P++ +FN+L+ G+ R G + ++ E+
Sbjct: 325 TLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCR 384
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
P +Y+ L+ C + A +L +EM D+ + D+ Y ++ G ++G ++ A
Sbjct: 385 DLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMA 444
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
FF EM G++ + + G + D A + +M GF P+ T V +
Sbjct: 445 RGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHA 504
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC + EA D+L+ +V GL P +Y +I G + G + +A +V EM+ KG P
Sbjct: 505 LCQQGNFEEACDLLE-NMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAP 563
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
S+ Y+ I + + +++A M +M E V
Sbjct: 564 SVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSV 596
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 105/233 (45%), Gaps = 1/233 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ +N +VG + + EM G PD +Y+V + C++ EA
Sbjct: 456 LKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEAC 515
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L E M + D V Y +II GF + G + +A E F EM GV S VT+ L++ +
Sbjct: 516 DLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAH 575
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+D A + ++ M K T +I LC RR+ EA K G+ P
Sbjct: 576 AAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEK-GILPN 634
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ SY LI C G EEAL++ EM+ + +P +S F+ ++ V
Sbjct: 635 KFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH 687
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 1/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+ L+ G ++ G + EM G +PD ++Y+ + + A +
Sbjct: 423 PDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSM 482
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EEM DV+ YN + C+ G A + M G+ VT+ ++NG+ +
Sbjct: 483 QEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVK 542
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A V+N+M KG P T VLI K+ + A + +++++ +
Sbjct: 543 NGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAF-MYFSKMLEKSVPANVI 601
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I GLC +M+EA K EM KG P+ Y+ I+ G E A L +EM
Sbjct: 602 TYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREM 661
Query: 485 FENQVRQE 492
+ +++ +
Sbjct: 662 LDRKIQPD 669
>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Brachypodium distachyon]
Length = 560
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 118/500 (23%), Positives = 205/500 (41%), Gaps = 39/500 (7%)
Query: 8 HIIFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS 67
HI + P LL +S + PP Q + ++ + R +HLL+ R
Sbjct: 24 HIRLRLPPCHPLLCLLHSYSPNDRPPPQHQPSHDAELWIAKALASAAFLRPHHLLAFRRL 83
Query: 68 GLTPTQFSQIALGLKNNPHLA--LRFFSFTQHKSLC-KHSLSSYATIIHILSRARLIGPA 124
+P + L++ P + L+ FS L S SY +I +L ++ A
Sbjct: 84 APSPVAAAAA---LRHAPCASSTLQLFSALHSSQLAIPPSAHSYRYVISMLCQSSRHTDA 140
Query: 125 RDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK-----CCLEVKNIEKIET 179
+ + P + L + G LL K CC+E K
Sbjct: 141 LKLFDQMTDQSGHFPNARFLSFLAGSCANAGFLDAAAALLSKAPQFGCCVEAYAYNK--- 197
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK--DV 237
LM+ + C + V+ +G I G +V+ + A G+ + DV
Sbjct: 198 -------LMNSFIG-----CGRVQDAVALFEGWIQGGAYSPDVWSFNV-AIKGVCQVGDV 244
Query: 238 KRVVRV---------RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSV 287
++ + + P+ T N L+ G R + +V + R G C P+ +Y+
Sbjct: 245 QKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVCMPNVVTYTS 304
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
+++ +C+ RM +A ++ +M + V YN +I G+ + G M A +++M L
Sbjct: 305 VISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILRR 364
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
VTF L++GYCR G +D A+ + +M + +P T ++I C + R EAL
Sbjct: 365 CPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEAL 424
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
LK ++ + P +I LC+ GK++EA + EM GKG P Y+ I G
Sbjct: 425 RFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIG 484
Query: 468 YMKEGNVEMATMLRKEMFEN 487
+ +G + A +M +
Sbjct: 485 HCMKGRISEAITFFNKMVDT 504
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 3/248 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN + L G + + + + GC + Y+Y+ LM F R+++A L
Sbjct: 155 PNARFLSFLAGSCANAGFLDAAAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVAL 214
Query: 305 WEE-MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+E ++ DV ++N I G C++G++ +A E M G +VT LV G C
Sbjct: 215 FEGWIQGGAYSPDVWSFNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLC 274
Query: 364 RAGDVDSAILVYNDMCRKGF-EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
R +V V + R G P T +I C R+ +A+ + ++ G P
Sbjct: 275 RVKEVSRGREVLRRLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYN-DMIGCGTTPN 333
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI G + G M A+ V +M+ + P + +S IDGY + G ++ A
Sbjct: 334 AVTYNVLINGYGKAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWT 393
Query: 483 EMFENQVR 490
EM + Q++
Sbjct: 394 EMSQYQIQ 401
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 124/296 (41%), Gaps = 65/296 (21%)
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW------EVSRGK---- 210
F++ IK +V +++K +++V + G S T N L+ EVSRG+
Sbjct: 231 FNVAIKGVCQVGDVQKA---LELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLR 287
Query: 211 ----------------GVISGY----------EIYREVFGLDSDATA--------GIGK- 235
VISGY +Y ++ G + A G GK
Sbjct: 288 RLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKA 347
Query: 236 -DVKRVV---------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
++ V R P+V TF+ L+ G+ R G + W EM++ +P+ +++
Sbjct: 348 GNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTF 407
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY----NTIIGGFCEIGEMARAEEFFR 341
S+++ FC++ R EA + +E+ N+ D+ N +I C+ G++ A
Sbjct: 408 SIIILSFCKQNRSAEALRFLKEL---NMRTDIAPRAFICNPVIDVLCKGGKVDEANLILM 464
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
EM G T+ L+ G+C G + AI +N M G P+ T+ IG L
Sbjct: 465 EMEGKGCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCL 520
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
K++ + P N ++ + G ++ + +EM GC PD Y+Y++L+ C
Sbjct: 428 KELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIGHCM 487
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
+ R+ EA + +M D D + N+ IG + G + + + SG SSS
Sbjct: 488 KGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGMPSEVDRIMKIA--SGSTSSS 543
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 184/445 (41%), Gaps = 39/445 (8%)
Query: 70 TPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR 129
T ++ I G L F + + + +Y +++ L +ARL A +V++
Sbjct: 6 TVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEVLK 65
Query: 130 VALRSPENDPKLKLFEVLVKTY-------REC----------GSAPFVF---DLLIKCCL 169
P L + ++ + R C G AP V ++ C
Sbjct: 66 EMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCR 125
Query: 170 EVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDA 229
+ K++ ++VR + +G+ T +ALI + V ++Y+E+ S
Sbjct: 126 D----GKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS-- 179
Query: 230 TAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLM 289
+P+V T+ AL+ GF + G EK + M C P+ +YS L+
Sbjct: 180 -------------WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLL 226
Query: 290 AVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
C+ + +A L+ M K +VV Y T+I G C ++ A EM +
Sbjct: 227 HGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCP 286
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
+V++ L++GYCR G ++ A ++ +M K P+ T L+ C+ R+ EA +
Sbjct: 287 PDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFL 346
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
L+ G+ P +Y ++ G + EA + EM+ + P+ YS+ IDG
Sbjct: 347 LENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLC 406
Query: 470 KEGNVEMATMLRKEMFENQVRQEDG 494
K G V+ A + K M +V G
Sbjct: 407 KAGRVDHAMEVLKNMVNKRVEPSVG 431
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 120/243 (49%), Gaps = 36/243 (14%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD--------------------------- 310
C+P ++++++ FC+ ++++A +E+MR+
Sbjct: 3 CQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYE 62
Query: 311 --------KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM-GLSGVESSSVTFEHLVNG 361
K+V D+V Y+T+I GFC+ GEM RA E REM G+ VT+ +V+G
Sbjct: 63 VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
CR G +D A + +M KG EP+ T LI C+ R+V EAL + K + P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI G C+ G +E+A+K+ M G+ P++ YS+ + G K G+++ A L
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242
Query: 482 KEM 484
+ M
Sbjct: 243 RRM 245
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 130/279 (46%), Gaps = 44/279 (15%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ ++NAL+ G+ R G E+ + ++ EMA C PD +Y+ L+ FC R+ EA L
Sbjct: 287 PDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFL 346
Query: 305 WEEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
E M+ ++ DVV Y+ ++ G+ A EF +EM V ++VT+ L++G C
Sbjct: 347 LENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLC 406
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP-- 421
+AG VD A+ V +M K EP T +IG LC + EA +L A + GL P
Sbjct: 407 KAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVA-MAAHGLEPGM 465
Query: 422 ----------------------------------------TEKSYMFLIKGLCEEGKMEE 441
E+++ LI+GLC+ ++++
Sbjct: 466 VTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDK 525
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
A+ V E+ + EP+ E A +DG ++ G E A L
Sbjct: 526 AMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKL 564
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 133/337 (39%), Gaps = 42/337 (12%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPAR---DVIRVALRSPENDP----- 139
AL F K C ++ +Y T+IH L A + AR D + P+
Sbjct: 238 ALDLFRRMTSKG-CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALL 296
Query: 140 ----KLKLFEVLVKTYRECGSAPFVFDLLIKCCL--EVKNIEKIETCVDIV-RMLMSRGL 192
+L E + ++E + + D + CL N ++E ++ M + G+
Sbjct: 297 DGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGI 356
Query: 193 SVKVSTCNALIWEVSRGKGVISGYEIYREVFG-------------LDSDATAGIGKDVKR 239
V T + ++ SR K + E +E+ +D AG
Sbjct: 357 DPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAME 416
Query: 240 VV------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
V+ RV P+V TFN+++ R G ++ + V MA G EP +Y+ L+ F
Sbjct: 417 VLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFS 476
Query: 294 EERRMREAEKLWEEMRDKNVEHDVV-------AYNTIIGGFCEIGEMARAEEFFREMGLS 346
RM A +L+E MR K + A++ +I G C+ E+ +A E+
Sbjct: 477 RTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSR 536
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
E + +V+G RAG + A + N + + G
Sbjct: 537 ECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 7/254 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+R V+ +N+L+ G+ + F + + EM G P SYS L+A C + + A
Sbjct: 401 IRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAM 460
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L EM V +V + T+I GFC+ G M A F +M S V + VTF ++ GY
Sbjct: 461 ELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGY 520
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC---DKRRVFEALDILKARVVKFGL 419
CR G+V A +Y+ M +G P+ T LI LC + E +D L+ V
Sbjct: 521 CRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNS 580
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
F S L+ G C+EG++ E + EM +G + L ++ + +K + E ++
Sbjct: 581 F----SLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISV 636
Query: 480 LRKEMFENQVRQED 493
L +EM E V+ ++
Sbjct: 637 LFREMKEKGVKPDN 650
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 126/249 (50%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V + + ++ G + G +K + + LG P+ ++ + L+ C++RR REAE+L
Sbjct: 298 PSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERL 357
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M ++ +E + V Y +I C+ G M A F M G+ + + L+NGYC+
Sbjct: 358 FRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQ 417
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ A + N+M KG P ++ LI LC K + A++ L + + G+
Sbjct: 418 HDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAME-LHREMARNGVSGNVY 476
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI G C++G M+EA ++ +M+ P+ ++ I+GY + GNV A L +M
Sbjct: 477 TFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQM 536
Query: 485 FENQVRQED 493
+ + ++
Sbjct: 537 VDRGLTPDN 545
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 112/221 (50%), Gaps = 1/221 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ NAL+ ++ F + E ++ MA G EP+ +Y++L+ C+ M +A +
Sbjct: 333 PNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCM 392
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ MR+K + V YN++I G+C+ +A EM G+ S+ ++ L+ G CR
Sbjct: 393 FDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCR 452
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GD+ SA+ ++ +M R G T LI C + EA + +++ + P E
Sbjct: 453 KGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFD-KMIDSSVVPNEV 511
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
++ +I+G C G + +A ++ +MV +G P Y + I
Sbjct: 512 TFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLI 552
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 146/319 (45%), Gaps = 20/319 (6%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDA------TAGIGKD-- 236
++ +GL+ ++ + LI + R + S E++RE+ G+ + +G KD
Sbjct: 431 MVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGN 490
Query: 237 VKRVVR---------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
+ R V PN TFN ++ G+ R G K ++ +M G PD Y+Y
Sbjct: 491 MDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRS 550
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L++V C +A++ +++ + V + + T++ GFC+ G + + EM G
Sbjct: 551 LISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARG 610
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
V+ ++F +V + D + +++ +M KG +P+ +I + + +AL
Sbjct: 611 VKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQAL 670
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+ +++ G P +Y LI LC+ G + A + EM+ F P+ Y+ F+D
Sbjct: 671 NCWD-KMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDF 729
Query: 468 YMKEGNVEMATMLRKEMFE 486
EG +E A +L + E
Sbjct: 730 LANEGELEKAKVLHATILE 748
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 1/243 (0%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
+T + ++ + F D++ EM + D Y Y+ + +CE R + A L
Sbjct: 161 YTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTR 220
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M K V+ V YN ++ G C + A E M G+ + VT+ LV G+CR +
Sbjct: 221 MESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEE 280
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
++ A+ + +DM F P ++ ++ L + + +A L + + G+ P +
Sbjct: 281 LEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFR-LACHLGELGMVPNLFACN 339
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
LI LC++ + EA ++ M +G EP+ Y+ I K G ++ A + M E
Sbjct: 340 ALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREK 399
Query: 488 QVR 490
+R
Sbjct: 400 GIR 402
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 121/254 (47%), Gaps = 10/254 (3%)
Query: 203 IWEVSRGKGV----ISGYEIYREVFGL-DSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
IW+ R +GV IS I L D + + + +++K V+P+ + F+ M+
Sbjct: 602 IWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEK-GVKPD-NVFHTCMIDV 659
Query: 258 Y-REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
+ +E + + W +M GC P+ +Y+VL+ C+ + A+ L EEM +
Sbjct: 660 HSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPN 719
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
YN + GE+ +A+ + L G +++VTF L+ G+C+AG + AI +
Sbjct: 720 SFTYNCFLDFLANEGELEKAKVLHATI-LEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQ 778
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
+ GF P+ + +I ELC + +A + + K GL P +Y LI+
Sbjct: 779 NNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYK-GLKPDIVAYNILIRWCNIH 837
Query: 437 GKMEEALKVQAEMV 450
G+ ++ L + ++MV
Sbjct: 838 GEFDKGLGIYSDMV 851
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 26/237 (10%)
Query: 146 VLVKTYRECGSAPFVFDLLIKCCLEV----KNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
VL + +E G P ++ C ++V +NI + C D +++ G S V T
Sbjct: 636 VLFREMKEKGVKPD--NVFHTCMIDVHSKEENIVQALNCWD---KMIADGCSPNVVTYTV 690
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
LI + + SGY ++A I + V R PN T+N + EG
Sbjct: 691 LINHLCK-----SGYL-----------SSAQILCEEMLVGRFLPNSFTYNCFLDFLANEG 734
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
EK + + + GC + +++ L+ FC+ +++ A L + + D ++Y+
Sbjct: 735 ELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYS 793
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
TII C++G++ +A + + EM G++ V + L+ G+ D + +Y+DM
Sbjct: 794 TIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDM 850
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 131/251 (52%), Gaps = 2/251 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ + VR V TF+ L+ + R G + + M GC+PD S+S++++ C++
Sbjct: 167 DLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKK 226
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
RR EAE ++ ++ K E DV+ Y +++ G+C G++A+AEE F +M +GV+ + T+
Sbjct: 227 RRASEAELFFDSLKHK-FEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTY 285
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++ CR G + A V+++M G +P T L+ R + L + ++
Sbjct: 286 SIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYN-QMK 344
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ G SY FLI+ C++ ++EA+KV MV KG P+ +++ + +V
Sbjct: 345 RLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVN 404
Query: 476 MATMLRKEMFE 486
A + +M E
Sbjct: 405 GAHRMYAKMKE 415
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 123/247 (49%), Gaps = 1/247 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ P+V + +L+ G+ R G K E+V+ +M G +P+ Y+YS+++ C ++ A
Sbjct: 242 KFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRA 301
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++ EM D + + V +N+++ + G + + + +M G + ++++ L+
Sbjct: 302 HDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIES 361
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C+ ++D A+ V + M +KG P ST + G + + V A + A++ + P
Sbjct: 362 HCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGA-HRMYAKMKELKCMP 420
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y L++ + ++ LK++ EM EP++ Y I + ++G+ A L
Sbjct: 421 NTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLM 480
Query: 482 KEMFENQ 488
KEM E +
Sbjct: 481 KEMVEEK 487
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 16/264 (6%)
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTF 250
G+ V T + +I + R + ++++ E+ D PN TF
Sbjct: 277 GVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCD----------------PNAVTF 320
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
N+LM + G EKV V+ +M RLGC D SY+ L+ C++ + EA K+ + M
Sbjct: 321 NSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVK 380
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
K V + +N+I G E+ ++ A + +M +++T+ L+ + + +D
Sbjct: 381 KGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDM 440
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
+ + +M EP +T +LI C+K A +++K V + L P Y ++
Sbjct: 441 VLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVL 500
Query: 431 KGLCEEGKMEEALKVQAEMVGKGF 454
+ L G++++ ++ +MV +GF
Sbjct: 501 ELLRNAGQLKKHEELVEKMVARGF 524
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 2/146 (1%)
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
L G SS + +++ + D A + + M +G ST VL+
Sbjct: 136 LEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAA 195
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
EA+ R+ +G P + S+ +I LC++ + EA ++ + + FEP + +Y++
Sbjct: 196 EAVHAFN-RMEDYGCKPDKVSFSIVISSLCKKRRASEA-ELFFDSLKHKFEPDVIVYTSL 253
Query: 465 IDGYMKEGNVEMATMLRKEMFENQVR 490
+ G+ + G++ A + +M E V+
Sbjct: 254 VHGWCRAGDIAKAEEVFSDMKEAGVK 279
>gi|255570073|ref|XP_002525999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534731|gb|EEF36423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 557
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 127/249 (51%), Gaps = 14/249 (5%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV+T+ AL+ GF + G E+ E +++M +G P+ Y+ ++ ++ + A K
Sbjct: 144 PNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMKY 203
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EMR ++ D+VAY +I G G + + E +M +G+ V L++ + +
Sbjct: 204 FSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFK 263
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG+ +A VY ++ +GFEP+ TI LI LC R +A G F EK
Sbjct: 264 AGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAK----------GYFCKEK 313
Query: 425 ----SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
SY LI G+C+EG ++E +V EM GF P +Y+++I ++G + A +
Sbjct: 314 ANEVSYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKV 373
Query: 481 RKEMFENQV 489
+ +M E +
Sbjct: 374 KNKMVEEGI 382
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 126/246 (51%), Gaps = 8/246 (3%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARL---GCEPDCYSYSVLMAVFCEERRMREA 301
P++ T+N+L+ G+ + G +VE+ + + R+ C D S++ L FC+ R+M+E
Sbjct: 5 PDIVTYNSLIDGYCKYG---QVEEACLTIKRIRNAECRVDLVSFNALFNGFCK-RKMKEE 60
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++ + K +V+ Y T I C++G++ +FF+EM G+ + + F L++G
Sbjct: 61 VFIYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDG 120
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
Y + G++D A +Y DMC+ P T LI C KR + E + ++++ G+ P
Sbjct: 121 YSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFC-KRGMLERAEWFFLKMLEVGIMP 179
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y +I G ++G ++ A+K +EM + F + Y I G + G ++ +
Sbjct: 180 NSTVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVM 239
Query: 482 KEMFEN 487
++M N
Sbjct: 240 EDMVRN 245
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 117/228 (51%), Gaps = 1/228 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+ + + G + + EM + G P+ +++ L+ + + + A +L
Sbjct: 74 PNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYSKIGNLDFAYQL 133
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++M +V Y +I GFC+ G + RAE FF +M G+ +S + +++G+ +
Sbjct: 134 YKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFK 193
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G++D A+ +++M ++ F + V+I L + R+ + L++++ +V+ GL P +
Sbjct: 194 KGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVME-DMVRNGLAPDKV 252
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
L+ + G + A V E++ +GFEP S+ IDG K+G
Sbjct: 253 VLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDG 300
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 112/225 (49%), Gaps = 14/225 (6%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDAT 230
N +++ ++++ ++ GL+ L+ + + Y +YRE+ G + DA
Sbjct: 228 NNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAV 287
Query: 231 A------GIGKDVKR------VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
G+ KD + + + N ++ AL+ G +EG ++VE V +EM+ G
Sbjct: 288 TISSLIDGLCKDGRYHDAKGYFCKEKANEVSYTALIDGICKEGNLDEVERVVMEMSESGF 347
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
PD + Y+ +A C + ++ EA K+ +M ++ ++ D++ Y+++I G G M A++
Sbjct: 348 VPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIEAKQ 407
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
F +M G+ S+ F+ L+ GY + + + ++ +M R+G
Sbjct: 408 LFDDMLKRGIIPDSMVFDILIRGYLKQDNPVAISHLHEEMRRRGL 452
>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
Length = 792
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 16/242 (6%)
Query: 246 NVHTFNALMVGFYRE-------GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
+ + FN ++ G R+ G E V D V PD ++Y L+ C+ +++
Sbjct: 360 STYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV--------PDVFTYGCLIHWLCKHQKL 411
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
EA LW++M++ V+ +V Y++++ G+CE G M A + + EM G + VT+ L
Sbjct: 412 HEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTL 471
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+ GY + D+A + N+M + G T +LI L RV E ++LK R + G
Sbjct: 472 MKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLK-RFLSEG 530
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
PT +Y +I G + G M A + +M KG P++ Y++FIDGY + ++A
Sbjct: 531 FVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAV 590
Query: 479 ML 480
L
Sbjct: 591 KL 592
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 1/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+ LM G+ ++ AF+ + EM + G Y+Y++L+ R+ E +++
Sbjct: 463 PNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEM 522
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + + YN+II GF + G M A +R+M G+ + VT+ ++GYCR
Sbjct: 523 LKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCR 582
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D A+ + + R G +P+ + I C + + AL L ++K GL P
Sbjct: 583 TNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFL-VLLLKDGLTPDVT 641
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y + G M EA K M+ + EIY+ IDG+ K GNV A L EM
Sbjct: 642 VYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEM 701
Query: 485 FENQVRQED 493
N V +D
Sbjct: 702 MANHVIPDD 710
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 136/309 (44%), Gaps = 22/309 (7%)
Query: 153 ECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGV 212
CG + +++LI V + +++ ++++ +S G T N++I + +
Sbjct: 497 SCGD--YTYNILINGLYMVNRVCEVD---EMLKRFLSEGFVPTTMTYNSIINGFVKAGMM 551
Query: 213 ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
S + +YR++ R + PN+ T+ + + G+ R + + +
Sbjct: 552 GSAFGMYRQM----------------RKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIY 595
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
+ R G +PD +Y+ + FC++ M A + + DV YN+ + G+ +
Sbjct: 596 VRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKM 655
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
MA A +F+ M V + + + L++G+ + G+V A+ +Y++M P+ T
Sbjct: 656 MAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTA 715
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
L LC + A +L + + + P +Y LI +GK++EA ++ EM+
Sbjct: 716 LTHGLCRSGDIDGAKRLLD-DMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSS 774
Query: 453 GFEPSLEIY 461
G P Y
Sbjct: 775 GVVPDDTTY 783
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P++ +NA + F ++G + V + + G PD Y+ + + + M EA
Sbjct: 601 IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEAS 660
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K + M + V D Y T+I GF ++G +A A E + EM + V TF L +G
Sbjct: 661 KFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGL 720
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR+GD+D A + +DM R P T +LI ++ EA L ++ G+ P
Sbjct: 721 CRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQ-LHDEMLSSGVVPD 779
Query: 423 EKSYMFL 429
+ +Y L
Sbjct: 780 DTTYDIL 786
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 140/302 (46%), Gaps = 24/302 (7%)
Query: 197 STCNAL-IWEVSRGKGVISGYEIYREVF------GLDSDAT------AGIGKDVKRVVRV 243
S +AL +++ RGKG + ++Y V G+ DA AG G V
Sbjct: 165 SAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAG--------V 216
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ + + G + ++ V +M G EP +YS ++ V + RM EA +
Sbjct: 217 KPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALR 276
Query: 304 LWEEMR-DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L ++M + DVV ++ G+C GE+ +A + F E+ GV ++VT+ L+ G
Sbjct: 277 LKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGC 336
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G D + M +G ++I L +R +A+ +L+ VV G+ P
Sbjct: 337 DAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLEL-VVDTGV-PD 394
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI LC+ K+ EA+ + +M G +PS+ Y + + GY ++G ++ A L
Sbjct: 395 VFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYS 454
Query: 483 EM 484
EM
Sbjct: 455 EM 456
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 89/218 (40%)
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+ M G PD S + L+ +A L++EMR K D Y+ +I
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G A F EM +GV+ + ++G C+ D D A+ V M GFEP T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
++ L R+ EAL + ++ G L+ G C G++ +AL + E+
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
V G P+ Y I G EG + L ++M E
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQ 355
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 10/234 (4%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ + L+V R + ++ EM GC D Y V++ +A
Sbjct: 146 VVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAV 205
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L++EM V+ D Y I G C++ + RA + +M +G E +T+ +V+
Sbjct: 206 RLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVL 265
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL-----CDKRRVFEALDILKARVVKF 417
+ G +D A+ + + M G ++V++ + C V +ALD+ VV
Sbjct: 266 VKVGRMDEALRLKDQM----LLATGKKMDVVLATMLMHGYCLHGEVGKALDLFD-EVVSD 320
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
G+ PT +Y LIKG EG +E K+ +M+ +G S ++ I G +++
Sbjct: 321 GVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRD 374
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
RV + + L+ GF + G +++ EM PD +++ L C + A
Sbjct: 670 RVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGA 729
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
++L ++MR +V ++V YN +I G++ A + EM SGV T++ L
Sbjct: 730 KRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 132/257 (51%), Gaps = 1/257 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ V VRP+V ++N L+ G G ++ + M +G +PD ++Y+ L+ +C+
Sbjct: 471 DLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKA 530
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
RR+ +A L+ EM K + VV YNTI+ G +IG A+E + M + + T+
Sbjct: 531 RRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTY 590
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
++NG CR VD A ++ +C K + + TI ++IG L R +A+D+ A +
Sbjct: 591 TIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLF-ATIS 649
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+GL P ++Y + + L +EG +EE ++ + M G P+ + +A + + G++
Sbjct: 650 AYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIG 709
Query: 476 MATMLRKEMFENQVRQE 492
A + ++ E E
Sbjct: 710 RAGVYLSKLDEKNFSLE 726
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 120/251 (47%), Gaps = 3/251 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VRPN HT+ L+ G+ G +++V + EM+ G +PDC Y+VL+ C+ R EA
Sbjct: 233 VRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEAR 292
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ + K ++ V Y ++ G+ G ++ F M +GV F + N Y
Sbjct: 293 NIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAY 352
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK-ARVVKFGLFP 421
+ +D A+ +++ M ++ P LI LC RV +A +LK +++ G+ P
Sbjct: 353 AKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDA--VLKFNQMINEGVTP 410
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ L+ GLC K E+A K+ E++ +G + ++ + +EG V A L
Sbjct: 411 DIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLI 470
Query: 482 KEMFENQVRQE 492
M VR +
Sbjct: 471 DLMLRVDVRPD 481
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 34/279 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P++ F++L+ G +EK E ++ E+ G + +++LM C E R+ EA+
Sbjct: 408 VTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQ 467
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L + M +V DV++YNT++ G C G + A + M G++ T+ L++GY
Sbjct: 468 RLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGY 527
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVL------IGELCDKRRVFEAL-------DI 409
C+A +D A ++ +M KG P T + IG C+ + ++ + DI
Sbjct: 528 CKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDI 587
Query: 410 LKARVVKFGL----FPTEKSYMF-----------------LIKGLCEEGKMEEALKVQAE 448
++ GL F E MF +I L + G+ E+A+ + A
Sbjct: 588 YTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFAT 647
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ G P +E Y + +KEG++E L M EN
Sbjct: 648 ISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEEN 686
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 117/246 (47%), Gaps = 1/246 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ H FN + + ++ ++ ++ +M + P +Y L+ C+ R+ +A
Sbjct: 338 VSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAV 397
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +M ++ V D+ +++++ G C + + +AE+ F E+ G+ ++ F L+
Sbjct: 398 LKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNL 457
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G V A + + M R P+ + L+ C R+ EA +L +V GL P
Sbjct: 458 CREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDV-MVSIGLKPD 516
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
E +Y L+ G C+ ++++A + EM+ KG P + Y+ + G + G A L
Sbjct: 517 EFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYL 576
Query: 483 EMFENQ 488
M N+
Sbjct: 577 NMINNR 582
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 111/242 (45%), Gaps = 1/242 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D R + P V + AL+ + G + + +M G PD + +S L+ C
Sbjct: 366 DKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTV 425
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ +AEKL+ E+ D+ + + +N ++ C G + A+ M V +++
Sbjct: 426 DKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISY 485
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
LV+G+C G +D A + + M G +P+ T L+ C RR+ +A + + ++
Sbjct: 486 NTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLM 545
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K GL P +Y ++ GL + G+ EA ++ M+ + + Y+ ++G + V+
Sbjct: 546 K-GLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVD 604
Query: 476 MA 477
A
Sbjct: 605 EA 606
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 111/246 (45%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PNV T+ ++ G + ++ + V+ M G P+ ++Y+ L+ + + +E ++
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQM 259
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EM ++ D V Y ++ C+ G A F + G++ + L++GY
Sbjct: 260 LQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYAT 319
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + + M R G P+ ++ K + EA+ I ++ + L P
Sbjct: 320 EGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFD-KMRQQWLSPGVV 378
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI LC+ G++++A+ +M+ +G P + ++S+ + G E A L E+
Sbjct: 379 NYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEV 438
Query: 485 FENQVR 490
+ +R
Sbjct: 439 LDQGIR 444
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 102/254 (40%), Gaps = 51/254 (20%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+I+ ++ +++S GL T N L+ + + + Y ++RE+
Sbjct: 497 RIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREML------------ 544
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ + P V T+N ++ G ++ G F + +++++ M + D Y+Y++++ C
Sbjct: 545 ----MKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRN 600
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGG-------------FCEI------------ 330
+ EA K+++ + K+++ D+ N +IG F I
Sbjct: 601 NFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETY 660
Query: 331 ----------GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
G + +E F M +G +S LV GD+ A + + +
Sbjct: 661 RLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDE 720
Query: 381 KGFEPEGSTIEVLI 394
K F E ST +LI
Sbjct: 721 KNFSLEASTTSMLI 734
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 200/448 (44%), Gaps = 50/448 (11%)
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPAR------------------ 125
+P AL F+ + H+ ++Y+T+IH L++ +
Sbjct: 71 DPQHALEIFNMVGEQKGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYETCKFHENIF 130
Query: 126 -DVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIV 184
++++ +S ++ L++F + RE S + + +E K I+ + C+
Sbjct: 131 LNLMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAI-STCLNILVESKQIDLAQKCL--- 186
Query: 185 RMLMSRGLSVKVSTC--NALIWEVSRGKGVISGYEIYREV------------FGLDSDAT 230
+ ++ L V+ +TC N L+ + + S E+ E+ + D
Sbjct: 187 -LYVNEHLKVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGL 245
Query: 231 AGIGKDVKRVV----------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
G G+ +K + ++ P+ T++ L+ GF G ++ + M GC+P
Sbjct: 246 CGNGR-LKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDP 304
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
+ ++YSVLM FC+E R+ EA+++++EM+ ++ D V Y T+I FC +G + A E
Sbjct: 305 NVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELL 364
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
+EM ++ +VTF L+ G CR G D A+ + ++ +G + +++ LC K
Sbjct: 365 KEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQK 424
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+ ++ +L + + G P + L+ LCE G ++ A+ + GF P +
Sbjct: 425 GELEKSCALLGLMLSR-GFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKS 483
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQ 488
++ I+ +E + L E+ E +
Sbjct: 484 WAHLIEYICRERKLLFVFELVDELVEKE 511
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 116/247 (46%), Gaps = 5/247 (2%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCE-PDCYSYSVLMAVFCEERRMREAEKLWEEM 308
F LM FY+ E+V +++ + + E P + S + + E +++ A+K +
Sbjct: 130 FLNLMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAISTCLNILVESKQIDLAQKCLLYV 189
Query: 309 RDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV-TFEHLVNGYCRAG 366
+ V + +N ++ C+ G++ A E EM S +V T+ L++G C G
Sbjct: 190 NEHLKVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNG 249
Query: 367 DVDSAILVYNDMCRKG-FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+ AI ++ +M K P+ T VLI C + A I++ + G P +
Sbjct: 250 RLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEF-MRSNGCDPNVFN 308
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y L+ G C+EG++EEA +V EM G +P Y+ I+ + G ++ A L KEM
Sbjct: 309 YSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMT 368
Query: 486 ENQVRQE 492
E + + +
Sbjct: 369 EMKCKAD 375
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 203/493 (41%), Gaps = 70/493 (14%)
Query: 69 LTPTQFSQI--ALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARD 126
L+P +F ++ K NP AL FF SL SY +I +L A L PAR
Sbjct: 77 LSPHEFDRLFPEFRFKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLSSPARV 136
Query: 127 VIRVALRS-----PENDPKLKLFEVLVKTYRECGSAPF-------VFDLLIKC-CLEVKN 173
V+ + P + L+ V + S F + DLLI+ C + K
Sbjct: 137 VLIRLINGNVPVLPCGNGGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKR 196
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF-GLDSDA--- 229
+ +D+ +L ++G+ +TCN L+ + R E + V G+ D
Sbjct: 197 -DGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCKGVSPDVYLF 255
Query: 230 TAGI-----GKDVKRVVR---------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR 275
T I G V+ + V PNV T+N ++ G G +++ +M
Sbjct: 256 TTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVE 315
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G EP +YS+L+ + +R+ +A + +EM +K +V+ YN +I E G + +
Sbjct: 316 RGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNK 375
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV--------------------------- 368
A E M G+ +S T+ L+ GYC++G
Sbjct: 376 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVIC 435
Query: 369 --------DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
DSA+ +M + P G + LI LC + +A++ L + + G
Sbjct: 436 LLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVE-LWLKFLNKGFL 494
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
K+ L+ GLCE GK+EE ++Q E++G+GF Y+ I G ++ A M
Sbjct: 495 VDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMF 554
Query: 481 RKEMFENQVRQED 493
EM + ++ ++
Sbjct: 555 MDEMVKKGLKPDN 567
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 149/322 (46%), Gaps = 32/322 (9%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG---------------- 224
V++ +++G V T NAL+ + + G+ I +E+ G
Sbjct: 482 VELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISG 541
Query: 225 ------LDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
LD +A + + VK+ ++P+ +T++ L+ G E+ W + R G
Sbjct: 542 CCGNKKLD-EAFMFMDEMVKK--GLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGM 598
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
PD Y+YSV++ C+ R E +KL++EM N++ + V YN +IG +C G ++ A E
Sbjct: 599 IPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALE 658
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI---G 395
+M G+ +S T+ L+ G V+ A L+ +M +G EP LI G
Sbjct: 659 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYG 718
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
+L +V L + ++ V P + +Y +I G +G + EA ++ EM KG
Sbjct: 719 KLGQMVKVECLLREMHSKNVH----PNKITYTVMIGGYARDGNVTEASRLLHEMREKGIV 774
Query: 456 PSLEIYSAFIDGYMKEGNVEMA 477
P Y FI GY+K+G V A
Sbjct: 775 PDSITYKEFIYGYLKQGGVLQA 796
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 169/404 (41%), Gaps = 49/404 (12%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVF 161
+L +Y+ ++ L++A+ IG A V+ K E G P V+
Sbjct: 321 TLITYSILVKGLTKAKRIGDAYCVL--------------------KEMTEKGFPPNVIVY 360
Query: 162 DLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE 221
+ LI +E ++ K ++I +++S+GLS+ ST N LI + + +E
Sbjct: 361 NNLIDSLIEAGSLNK---AIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKE 417
Query: 222 VFGLDSDATAG---------------------IGKDVKRVVRVRPNVHTFNALMVGFYRE 260
+ + + G +G+ + R + P L+ G +
Sbjct: 418 MLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLR--NMSPGGGLLTTLISGLCKH 475
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G K ++W++ G D + + L+ CE ++ E ++ +E+ + D V+Y
Sbjct: 476 GKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSY 535
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
NT+I G C ++ A F EM G++ + T+ L+ G V+ AI + D R
Sbjct: 536 NTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKR 595
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
G P+ T V+I C R E + ++ L P Y LI C G++
Sbjct: 596 NGMIPDVYTYSVMIDGCCKAERTEEGQKLFD-EMMSNNLQPNTVVYNHLIGAYCRSGRLS 654
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
AL+++ +M KG P+ Y++ I G VE A +L +EM
Sbjct: 655 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEM 698
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 1/242 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N L+ G+ + G + E + EM +G + S++ ++ + C A + EM
Sbjct: 394 TYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEM 453
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+N+ T+I G C+ G+ ++A E + + G + T L++G C AG +
Sbjct: 454 LLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKL 513
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ + ++ +GF + + LI C +++ EA + +VK GL P +Y
Sbjct: 514 EEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAF-MFMDEMVKKGLKPDNYTYSI 572
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI+GL K+EEA++ + G P + YS IDG K E L EM N
Sbjct: 573 LIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNN 632
Query: 489 VR 490
++
Sbjct: 633 LQ 634
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 183/425 (43%), Gaps = 53/425 (12%)
Query: 71 PTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRV 130
P F ++ ++ P +ALRFF + + K S + I+ IL L+ A V+
Sbjct: 85 PHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMER 144
Query: 131 ALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSR 190
+ + + +VL+ + C VFD +I+ L + ++ C I+R+L
Sbjct: 145 VVSFEMHG----VVDVLIAGHVXC---LLVFDKMIRNGL----LPDVKNCNRILRVLRDE 193
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTF 250
L +S+ K V E FG ++P V T+
Sbjct: 194 NL-------------LSKAKNVYG----MMEQFG------------------IKPTVVTY 218
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
N ++ + +EG ++ ++ EM GC P+ +Y+VL+ ++ + +A+ L EEM +
Sbjct: 219 NTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLN 278
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
+ YN +I GFC+ G A + EM + T+ L+ G C+ V
Sbjct: 279 SGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTG 338
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA---LDILKARVVKFGLFPTEKSYM 427
L ++DM + F P+ + L+ C + EA D LK R L PT +Y
Sbjct: 339 VRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCR----DLVPTVITYN 394
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
LI GLC G ++ AL+++ EM +G P + Y+ ++G K G V MA EM
Sbjct: 395 TLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSK 454
Query: 488 QVRQE 492
++ +
Sbjct: 455 GLKPD 459
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 152/333 (45%), Gaps = 20/333 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA---- 231
++E ++ +++ GL+V T N LI + + +++ E+ + T
Sbjct: 265 ELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYN 324
Query: 232 ----GIGKDVKRV-VRVR----------PNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
G+ K V+ VR+R P++ +FN+L+ G+ R G + ++ E+
Sbjct: 325 TLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCR 384
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
P +Y+ L+ C + A +L +EM D+ + D+ Y ++ G ++G ++ A
Sbjct: 385 DLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMA 444
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
FF EM G++ + + G + D A + +M GF P+ T V +
Sbjct: 445 RGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHA 504
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC + EA D+L+ +V GL P +Y +I G + G + +A +V EM+ KG P
Sbjct: 505 LCQQGNFEEACDLLE-NMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAP 563
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
S+ Y+ I + + +++A M +M E V
Sbjct: 564 SVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSV 596
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 105/233 (45%), Gaps = 1/233 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ +N +VG + + EM G PD +Y+V + C++ EA
Sbjct: 456 LKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEAC 515
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L E M + D V Y +II GF + G + +A E F EM GV S VT+ L++ +
Sbjct: 516 DLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAH 575
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+D A + ++ M K T +I LC RR+ EA K G+ P
Sbjct: 576 AAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEK-GILPN 634
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ SY LI C G EEAL++ EM+ + +P +S F+ ++ V
Sbjct: 635 KFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH 687
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 1/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+ L+ G ++ G + EM G +PD ++Y+ + + A +
Sbjct: 423 PDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSM 482
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
EEM DV+ YN + C+ G A + M G+ VT+ ++NG+ +
Sbjct: 483 QEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVK 542
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A V+N+M KG P T VLI K+ + A + +++++ +
Sbjct: 543 NGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAF-MYFSKMLEKSVPANVI 601
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y +I GLC +M+EA K EM KG P+ Y+ I+ G E A L +EM
Sbjct: 602 TYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREM 661
Query: 485 FENQVRQE 492
+ +++ +
Sbjct: 662 LDRKIQPD 669
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 14/224 (6%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+N + ++G FE+ D+ M G PD +Y+ ++ F + +R+A ++
Sbjct: 493 PDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREV 552
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM K V VV Y +I + A +F +M V ++ +T+ ++NG C
Sbjct: 553 FNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCM 612
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+D A +++M KG P + +LI E C+ EAL + + + + + P
Sbjct: 613 TRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDR-KIQPDSF 671
Query: 425 SYMFLIKGL----------CEEG---KMEEALKVQAEMVGKGFE 455
++ +K L C E +E+ + V+ EM+ G E
Sbjct: 672 THSVFLKNLHRDYQVHAVQCVESLIQNVEDNINVRIEMLIGGLE 715
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 128/242 (52%), Gaps = 1/242 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ V VRP+V ++N L+ G G ++ + + +G +PD +Y+ L+ +C+
Sbjct: 471 DLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKA 530
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
RR+ +A L+ EM K + DVV YNTI+ G + G + A+E + M S + + T+
Sbjct: 531 RRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTY 590
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
++NG C+ VD A +++ +C K + + T ++IG L R +A+D+ A +
Sbjct: 591 NIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLF-ATIS 649
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+GL P ++Y + + L +EG +EE ++ + M G P+ + +A + + G++
Sbjct: 650 AYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIN 709
Query: 476 MA 477
A
Sbjct: 710 RA 711
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 124/263 (47%), Gaps = 6/263 (2%)
Query: 231 AGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE-MARLGCEPDCYSYSVLM 289
A G +K RV V F+ L+ G ++ D+ + M GC PD +SYS+L+
Sbjct: 113 AAFGLILKTGWRVNDTV-IFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILL 171
Query: 290 AVFCEERRMREAEKLWEEMRDK-NVEH--DVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
FC E+R EA +L M D + H +VV Y T+I G C+ + RA+ F+ M
Sbjct: 172 KGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDK 231
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
GV ++ T+ L++GY G + + +M G +P+ VL+ LC R EA
Sbjct: 232 GVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEA 291
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+I + V++ G+ P Y L+ G EG + E MVG G P I++
Sbjct: 292 RNIFDS-VIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFC 350
Query: 467 GYMKEGNVEMATMLRKEMFENQV 489
Y K+ ++ A + +M + ++
Sbjct: 351 AYAKKAMIDEAMHIFDKMRQQRL 373
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 120/248 (48%), Gaps = 1/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ H FN + + ++ ++ ++ +M + P+ +Y L+ C+ R+ +A
Sbjct: 338 VSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAV 397
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ +M D+ + D+ +++++ G C + + +AEE F E+ G+ +V F L+
Sbjct: 398 LKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNL 457
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CR G V A + + M R G P+ + L+ C R+ EA +L +V GL P
Sbjct: 458 CREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDV-IVSIGLKPD 516
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+ +Y L+ G C+ ++++A + EM+ KG P + Y+ + G + G A L
Sbjct: 517 KVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYL 576
Query: 483 EMFENQVR 490
M ++ +
Sbjct: 577 SMINSRTQ 584
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 132/312 (42%), Gaps = 69/312 (22%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VRPN HT+ L+ G+ G +++V + EM+ G +PDCY Y+VL+ C+ R EA
Sbjct: 233 VRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEAR 292
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS---------- 352
+++ + K ++ +V Y ++ G+ G ++ F M +GV
Sbjct: 293 NIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAY 352
Query: 353 -------------------------VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
VT+ L++ C+ G VD A+L +N M +G P+
Sbjct: 353 AKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDI 412
Query: 388 STIEVLIGELC--DK-----RRVFEALD----------------------ILKAR----- 413
L+ LC DK FE LD +++A+
Sbjct: 413 FVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDL 472
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+++ G+ P SY L+ G C G+++EA K+ +V G +P Y+ + GY K
Sbjct: 473 MLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARR 532
Query: 474 VEMATMLRKEMF 485
++ A L +EM
Sbjct: 533 IDDAYSLFREML 544
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 118/242 (48%), Gaps = 1/242 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D R R+ PN+ T+ AL+ + G + + +M G PD + +S L+ C
Sbjct: 366 DKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTV 425
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ +AE+L+ E+ D+ + D V +NT++ C G + A+ M GV +++
Sbjct: 426 DKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISY 485
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
LV+G+C G +D A + + + G +P+ T L+ C RR+ +A + + ++
Sbjct: 486 NTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLM 545
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K GL P +Y ++ GL + G+ EA ++ M+ + ++ Y+ I+G K V+
Sbjct: 546 K-GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVD 604
Query: 476 MA 477
A
Sbjct: 605 EA 606
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 125/277 (45%), Gaps = 34/277 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ F++L+ G +EK E+++ E+ G D ++ LM C E R+ EA++L
Sbjct: 410 PDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRL 469
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M V DV++YNT++ G C G + A + + G++ VT+ L++GYC+
Sbjct: 470 IDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCK 529
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA-------------LDILK 411
A +D A ++ +M KG P+ T ++ L R EA ++I
Sbjct: 530 ARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYT 589
Query: 412 ARVVKFGL----FPTEKSYMF-----------------LIKGLCEEGKMEEALKVQAEMV 450
++ GL F E MF +I L + G+ E+A+ + A +
Sbjct: 590 YNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATIS 649
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
G P +E Y + +KEG++E L M EN
Sbjct: 650 AYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEEN 686
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 12/207 (5%)
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE-------EFFREMGLSGVES 350
+ +A KL++EM V A+N ++ + +E RE + V
Sbjct: 32 LNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIK-VAP 90
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI-EVLIGELCDKRRVFEALDI 409
SS T+ L+ +CR G + + + + G+ + I L+ LCD +RV EA DI
Sbjct: 91 SSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDI 150
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG---FEPSLEIYSAFID 466
L R+ +FG P SY L+KG C E + EEAL++ + M G P++ Y+ ID
Sbjct: 151 LLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVID 210
Query: 467 GYMKEGNVEMATMLRKEMFENQVRQED 493
G K V+ A + + M + VR +
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNN 237
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 118/289 (40%), Gaps = 49/289 (16%)
Query: 240 VVRVRP-NVHTFNALMVGFYR---EGAFEKVEDVWVEMAR---LGCEPDCYSYSVLMAVF 292
+ RP +V FN L+ R A E V ++ M R + P ++Y++L+ F
Sbjct: 43 LTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFTYTILIGCF 102
Query: 293 ------------------------------------CEERRMREA-EKLWEEMRDKNVEH 315
C+ +R+ EA + L M +
Sbjct: 103 CRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTP 162
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS---VTFEHLVNGYCRAGDVDSAI 372
DV +Y+ ++ GFC A E M G S + VT+ +++G C+A VD A
Sbjct: 163 DVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAK 222
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
V+ M KG P T LI + E + +L+ + GL P Y L+
Sbjct: 223 GVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQ-EMSTHGLQPDCYIYAVLLDY 281
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV-EMATML 480
LC+ G+ EA + ++ KG +P++ IY + GY EG++ EM + L
Sbjct: 282 LCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFL 330
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 96/238 (40%), Gaps = 19/238 (7%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATA-- 231
+I+ ++ +++S GL T N L+ + + + Y ++RE+ GL D
Sbjct: 497 RIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYN 556
Query: 232 ---------GIGKDVKRVV------RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
G + K + R + N++T+N ++ G + ++ ++ +
Sbjct: 557 TILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSK 616
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
+ D ++ ++++ + R +A L+ + + DV Y I + G +
Sbjct: 617 DLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEEL 676
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
+E F M +G +S LV GD++ A + + K F E ST +LI
Sbjct: 677 DELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLI 734
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 129/249 (51%), Gaps = 1/249 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
DV R + PN+HT+N L+ G R G E + M +G +P Y+Y++ + F +
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKS 450
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+A + +E+M+ K + ++VA N + E+G + A+ F + +G+ SVT+
Sbjct: 451 GETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTY 510
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
++ Y + G VD A+ + ++M R G EP+ + LI L RV EA + R+
Sbjct: 511 NMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD-RMK 569
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
L PT +Y L+ GL +EG++++A+++ M+ K P+ ++ +D + K VE
Sbjct: 570 DMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVE 629
Query: 476 MATMLRKEM 484
+A + +M
Sbjct: 630 LALKMFSKM 638
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 124/245 (50%), Gaps = 7/245 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P + ++N L+ EK D++ +M +GC PD +++++L+AV + ++ E
Sbjct: 784 ISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELF 843
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L++EM + + D + YN +I + + +A +FF ++ S + T+ L++G
Sbjct: 844 ELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGL 903
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI---GELCDKRRVFEALDILKARVVKFGL 419
+ G ++ A+ ++ +M G +P + +LI G++ D + L R+V G+
Sbjct: 904 AKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQ----LFKRMVNEGI 959
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P KSY L+ LC G+++EAL E+ G +P Y+ I+G K +E A
Sbjct: 960 RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALA 1019
Query: 480 LRKEM 484
L EM
Sbjct: 1020 LYNEM 1024
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 121/250 (48%), Gaps = 2/250 (0%)
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
KD+K V P+ TFN L+ + G ++ +++ EM C+PD +Y+++++ +
Sbjct: 812 KDMKNV-GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAK 870
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ +A + ++ + Y +I G ++G + A F EM G + +
Sbjct: 871 SNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAI 930
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
F L+NGY + GD ++A ++ M +G P+ + +L+ LC RV EAL +
Sbjct: 931 FNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFN-EL 989
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
GL P +Y +I GL + +MEEAL + EM +G P L Y++ + G V
Sbjct: 990 KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049
Query: 475 EMATMLRKEM 484
E A + +E+
Sbjct: 1050 EQAKRMYEEL 1059
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 159/347 (45%), Gaps = 22/347 (6%)
Query: 140 KLKLFEVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
+L +++ K ++ G +P + ++ LI LEV EK D+ + + + G +
Sbjct: 768 ELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEK---AWDLFKDMKNVGCAPDAF 824
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T N L+ + + +E+Y+E+ + R R +P+ T+N ++
Sbjct: 825 TFNMLLAVHGKSGKITELFELYKEM--------------ISR--RCKPDAITYNIVISSL 868
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ +K D + ++ P +Y L+ + R+ EA +L+EEM D + +
Sbjct: 869 AKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNC 928
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
+N +I G+ +IG+ A + F+ M G+ ++ LV+ C AG VD A+ +N+
Sbjct: 929 AIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNE 988
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
+ G +P+ +I L +R+ EAL L + G+ P +Y L+ L G
Sbjct: 989 LKSTGLDPDFIAYNRIINGLGKSQRMEEAL-ALYNEMRNRGIVPDLYTYNSLMLNLGLAG 1047
Query: 438 KMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+E+A ++ E+ G EP + Y+A I GY N E A + K M
Sbjct: 1048 MVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNM 1094
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 147/307 (47%), Gaps = 17/307 (5%)
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRV 240
+++ R ++S GL + T +AL+ + + + DS+ + K+++ +
Sbjct: 212 LEVYRRMVSEGLKPSLKTYSALMVALGKKR---------------DSEMVMVLLKEMEDL 256
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+RPNV+TF + R G ++ +++ M GC PD +Y+VL+ C ++
Sbjct: 257 -GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLEN 315
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A++L+ +M+ + D V Y T++ F + G++ +EF+ +M G VTF LV+
Sbjct: 316 AKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVD 375
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
C+A D D A ++ M ++G P T LI L R+ +AL +L + G+
Sbjct: 376 VLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLL-GTMESVGVQ 434
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
PT +Y I + G+ +A++ +M KG P++ +A + + G + A +
Sbjct: 435 PTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTM 494
Query: 481 RKEMFEN 487
+ EN
Sbjct: 495 FNGLREN 501
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 167/374 (44%), Gaps = 30/374 (8%)
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
++LFE +++ ++C F+ L+ C KN +++E + + + V T N
Sbjct: 597 IELFESMIE--KKCSPNTISFNTLLDCF--CKN-DEVELALKMFSKMTVMDCKPDVLTYN 651
Query: 201 ALIWEVSRGKGVISGYEIYREV--------------------FGLDSDATAGIGKDVKRV 240
+I+ + + V + + ++ G DA + I +D
Sbjct: 652 TVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAIS-IARDFMYQ 710
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEERRMR 299
VR R N + LM G E +K E+ G C D + L+ V C+ +R
Sbjct: 711 VRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIP-LVRVLCKHKREL 769
Query: 300 EAEKLWEEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
A +++++ K + + +YN +IG E+ +A + F++M G + TF L
Sbjct: 770 YAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNML 829
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+ + ++G + +Y +M + +P+ T ++I L + +ALD +V
Sbjct: 830 LAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF-YDLVSSD 888
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
PT ++Y LI GL + G++EEA+++ EM G +P+ I++ I+GY K G+ E A
Sbjct: 889 FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948
Query: 479 MLRKEMFENQVRQE 492
L K M +R +
Sbjct: 949 QLFKRMVNEGIRPD 962
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 123/250 (49%), Gaps = 3/250 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N +M + + G ++ ++ EM R GCEPD + L+ + R+ EA ++
Sbjct: 505 PDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQM 564
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ M+D + VV YNT++ G + G + +A E F M ++++F L++ +C+
Sbjct: 565 FDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCK 624
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+V+ A+ +++ M +P+ T +I L + +V A +K + P
Sbjct: 625 NDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ--LKKSMHPDHV 682
Query: 425 SYMFLIKGLCEEGKMEEALKVQAE-MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+ L+ GL + G++ +A+ + + M F + + + G + E ++ A + +E
Sbjct: 683 TICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEE 742
Query: 484 MFENQVRQED 493
+ N + +ED
Sbjct: 743 LVLNGICRED 752
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 42/265 (15%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +++N L+ + G + +V+ M G +P +YS LM ++R L
Sbjct: 191 NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLL 250
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM D + +V + I G++ A E FR M G VT+ L++ C A
Sbjct: 251 KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 310
Query: 366 -----------------------------------GDVDSAILVYNDMCRKGFEPEGSTI 390
GD+D+ ++ M G+ P+ T
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTF 370
Query: 391 EVLIGELCDKR---RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+L+ LC R F D+++ K G+ P +Y LI GL G++E+ALK+
Sbjct: 371 TILVDVLCKARDFDEAFATFDVMR----KQGILPNLHTYNTLICGLLRAGRIEDALKLLG 426
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEG 472
M G +P+ Y+ FID + K G
Sbjct: 427 TMESVGVQPTAYTYNIFIDYFGKSG 451
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 151/374 (40%), Gaps = 46/374 (12%)
Query: 21 QLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFS-QIAL 79
Q+ +F+ P+ S+N + + LL H ++ W+ + G P F+ + L
Sbjct: 773 QIFDKFTKKLGISPTLASYNCL--IGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830
Query: 80 GLKNNPHLALRFFSFTQH--KSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN 137
+ F + CK +Y +I L+++ + A D + S
Sbjct: 831 AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSD-- 888
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
F +TY P + D L K + ++E + + + G +
Sbjct: 889 ------FRPTPRTY-----GPLI-DGLAK-------VGRLEEAMRLFEEMSDYGCKPNCA 929
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR--VRPNVHTFNALMV 255
N LI G G I E ++F KR+V +RP++ ++ L+
Sbjct: 930 IFNILI----NGYGKIGDTETACQLF--------------KRMVNEGIRPDLKSYTILVD 971
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G ++ + E+ G +PD +Y+ ++ + +RM EA L+ EMR++ +
Sbjct: 972 CLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVP 1031
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
D+ YN+++ G + +A+ + E+ L+G+E T+ L+ GY + + + A VY
Sbjct: 1032 DLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVY 1091
Query: 376 NDMCRKGFEPEGST 389
+M G P T
Sbjct: 1092 KNMMVDGCNPNIGT 1105
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 5/189 (2%)
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
++ + ++E M+ K + D+ Y TI G + + +M +G ++ ++
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L++ ++G A+ VY M +G +P T L+ L K+R E + +L +
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL-GKKRDSEMVMVLLKEMED 255
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
GL P ++ I+ L GK++EA ++ M +G P L Y+ ID G +E
Sbjct: 256 LGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLEN 315
Query: 477 ATMLRKEMF 485
A KE+F
Sbjct: 316 A----KELF 320
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 107/276 (38%), Gaps = 34/276 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+R ++ T+ + G ++ V +M + G + YSY+ L+ + + EA
Sbjct: 153 IRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEAL 212
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ M + ++ + Y+ ++ + + +EM G+ + TF +
Sbjct: 213 EVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVL 272
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC------------------------ 398
RAG +D A ++ M +G P+ T VLI LC
Sbjct: 273 GRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332
Query: 399 -------DKRRVFEALDILK---ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAE 448
DK F LD K +++ G P ++ L+ LC+ +EA
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV 392
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
M +G P+L Y+ I G ++ G +E A L M
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTM 428
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 129/260 (49%), Gaps = 18/260 (6%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T++ ++ EK ++ EM R G PD Y+Y+ L+ FC+ + +A
Sbjct: 120 PDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNW 179
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++EM+ +VV Y +I + + +++RA E F M +G + VT+ L++G+C+
Sbjct: 180 FDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCK 239
Query: 365 AGDVDSAILVYNDMCRKGF-----------------EPEGSTIEVLIGELCDKRRVFEAL 407
AG+ + A +Y M EP T L+ LC +V EA
Sbjct: 240 AGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEAR 299
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
D+L+ ++ G P + Y LI G C+ GK++EA +V +M+G G P++ YS+ ID
Sbjct: 300 DLLETMSLE-GCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDK 358
Query: 468 YMKEGNVEMATMLRKEMFEN 487
K+ +++A + +M EN
Sbjct: 359 LFKDKRLDLALKVLTKMLEN 378
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 169/374 (45%), Gaps = 40/374 (10%)
Query: 134 SPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKC----CLEVKNIEKIETCVDIVRMLMS 189
S E+ P +++ + + Y E V + + C CL I K E +++R +MS
Sbjct: 58 STEDLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCC--IGKFEKAYNVIREMMS 115
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
+G ST + +I + V +++++E+ KR + P+V+T
Sbjct: 116 KGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEM---------------KRN-GITPDVYT 159
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ F + G E+ + + EM + GC P+ +Y+ L+ + + R++ A +++E M
Sbjct: 160 YTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMML 219
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV-----------------ESSS 352
++V Y +I G C+ GE +A + + M V E +
Sbjct: 220 SNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNV 279
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ LV+G C+A V A + M +G EP + LI C ++ EA ++
Sbjct: 280 VTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVF-T 338
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+++ G P +Y LI L ++ +++ ALKV +M+ P++ IY+ +DG K G
Sbjct: 339 KMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVG 398
Query: 473 NVEMATMLRKEMFE 486
+ A L M E
Sbjct: 399 KTDEAYRLMLMMEE 412
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 190/428 (44%), Gaps = 38/428 (8%)
Query: 66 RSGLTPTQFSQIAL-------GLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRA 118
R+G+TP ++ L GL A +F Q C ++ +Y +IH +
Sbjct: 150 RNGITPDVYTYTTLLDRFCKVGLIEQ---ARNWFDEMQQDG-CAPNVVTYTALIHAYLKT 205
Query: 119 RLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIE 178
R + A ++ + L S P + + L+ + + G + + +KN +
Sbjct: 206 RKLSRANEIFEMML-SNGCVPNIVTYTALIDGHCKAGETEKACQIYAR----MKNDKVDI 260
Query: 179 TCVDI-VRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
VDI R++ S V T AL+ + + V ++ L++ + G
Sbjct: 261 PDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDL------LETMSLEG----- 309
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
PN ++AL+ GF + G ++ ++V+ +M GC P+ Y+YS L+ +++R
Sbjct: 310 -----CEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKR 364
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A K+ +M + + +VV Y ++ G C++G+ A M G + VT+
Sbjct: 365 LDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTA 424
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
+++G+ +AG VD + + M KG P T VLI C + +A +L+ +K
Sbjct: 425 MIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEE--MKQ 482
Query: 418 GLFPTEKS-YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
+P Y +I+G E +L + AE+ G P L +Y ID ++K G +EM
Sbjct: 483 TYWPKHIGMYRKVIEGFSHE--FVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEM 540
Query: 477 ATMLRKEM 484
A L +E+
Sbjct: 541 ALELHEEL 548
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 7/217 (3%)
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR- 335
GC P ++ L+ +C A KL ++M + V YN +IGG C ++
Sbjct: 6 GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65
Query: 336 -----AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
AE + EM GV + V + C G + A V +M KGF P+ ST
Sbjct: 66 EVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTY 125
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+IG LC+ +V +A + + + + G+ P +Y L+ C+ G +E+A EM
Sbjct: 126 SKVIGYLCNASKVEKAFQLFQ-EMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQ 184
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
G P++ Y+A I Y+K + A + + M N
Sbjct: 185 QDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSN 221
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 7/255 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE---- 300
P+ FN+L+ + R G + + +M G +P Y++L+ C +
Sbjct: 9 PSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVI 68
Query: 301 --AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
AE+ + EM + V + V C IG+ +A REM G S T+ +
Sbjct: 69 GLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKV 128
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+ C A V+ A ++ +M R G P+ T L+ C + +A + + + G
Sbjct: 129 IGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD-EMQQDG 187
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
P +Y LI + K+ A ++ M+ G P++ Y+A IDG+ K G E A
Sbjct: 188 CAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKAC 247
Query: 479 MLRKEMFENQVRQED 493
+ M ++V D
Sbjct: 248 QIYARMKNDKVDIPD 262
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV--F 404
G S + F LV+ YCR+GD A + M G++P +LIG +C +
Sbjct: 6 GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65
Query: 405 EALDILK---ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
E + + + +++ G+ + + + LC GK E+A V EM+ KGF P Y
Sbjct: 66 EVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTY 125
Query: 462 SAFIDGYMKEGNVEMATMLRKEMFENQV 489
S I VE A L +EM N +
Sbjct: 126 SKVIGYLCNASKVEKAFQLFQEMKRNGI 153
>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 117/232 (50%), Gaps = 1/232 (0%)
Query: 253 LMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
+++ R G ++ +V+ M+ C D Y+YS LM C E R+ EA L +EM+ +
Sbjct: 6 IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
+ VA+N +I C+ G+++RA + M L G + VT+ LV+G C G +D A+
Sbjct: 66 TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+ N M P T L+ R + + +L + K G E SY LI G
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEK-GYRGNEFSYSSLISG 184
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
L +EGK E +++ EMV KG +P+ +YSA IDG +EG + A EM
Sbjct: 185 LFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEM 236
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 1/246 (0%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
+T++ LM G EG ++ + EM G P+ +++VL++ C++ + A KL +
Sbjct: 36 YTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDN 95
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M K + V YN+++ G C G++ +A M + + +TF LV+G+ + G
Sbjct: 96 MFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGR 155
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+ V + KG+ + LI L + + + + K V K G P Y
Sbjct: 156 ALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEK-GCKPNTIVYS 214
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
LI GLC EGK +EA + EM KG P+ YS+ + GY + G++ A ++ KEM +N
Sbjct: 215 ALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDN 274
Query: 488 QVRQED 493
+
Sbjct: 275 DCNHHE 280
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 120/245 (48%), Gaps = 5/245 (2%)
Query: 245 PNVHTFNALMVGFYREG-AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
PN TF L+ GF + G A + V V V + G + +SYS L++ +E + +
Sbjct: 138 PNDITFGTLVDGFVKHGRALDGVR-VLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQ 196
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
LW+EM +K + + + Y+ +I G C G+ A+E+ EM G +S T+ L+ GY
Sbjct: 197 LWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYF 256
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
AGD+ AILV+ +M +LI LC ++ EAL + K +++ G+
Sbjct: 257 EAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWK-QMLSRGIKLDV 315
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMV--GKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y +I G C +E+ +K+ +M+ +P + Y+ ++ + + +V A +
Sbjct: 316 VAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDIL 375
Query: 482 KEMFE 486
M +
Sbjct: 376 NTMLD 380
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 108/223 (48%), Gaps = 1/223 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
R N ++++L+ G ++EG E +W EM GC+P+ YS L+ C E + EA++
Sbjct: 172 RGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKE 231
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
EM++K + Y++++ G+ E G++ +A ++EM + V + L+NG C
Sbjct: 232 YLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLC 291
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV-KFGLFPT 422
+ G + A++V+ M +G + + +I C+ + V + + + + L P
Sbjct: 292 KNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPD 351
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
+Y L+ C + + A+ + M+ +G +P F+
Sbjct: 352 VVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFL 394
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 24/222 (10%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+++LM G++ G K VW EM C YS+L+ C+ +++EA +
Sbjct: 243 PNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIV 302
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG--VESSSVTFEHLVNGY 362
W++M + ++ DVVAY+++I GFC + + + F +M ++ VT+ L+N +
Sbjct: 303 WKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAF 362
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD---------------------KR 401
C V AI + N M +G +P+ T ++ + L D ++
Sbjct: 363 CTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQ 422
Query: 402 RVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
R A +I++ + KF L P ++ ++ LC+ K+ + +
Sbjct: 423 RTVGASNIIEVMLQKF-LLPKPSTWALAVQQLCKPMKVRKTI 463
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 114/246 (46%), Gaps = 11/246 (4%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N+L+ G +G +K + M C P+ ++ L+ F + R + ++
Sbjct: 103 PNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRV 162
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +K + +Y+++I G + G+ + ++EM G + +++ + L++G CR
Sbjct: 163 LVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCR 222
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT-- 422
G D A +M KG P T L+ FEA DI KA +V +
Sbjct: 223 EGKPDEAKEYLIEMKNKGHTPNSFTYSSLM------WGYFEAGDIHKAILVWKEMTDNDC 276
Query: 423 ---EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
E Y LI GLC+ GK++EAL V +M+ +G + + YS+ I G+ VE
Sbjct: 277 NHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMK 336
Query: 480 LRKEMF 485
L +M
Sbjct: 337 LFNQML 342
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 156/331 (47%), Gaps = 24/331 (7%)
Query: 171 VKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDAT 230
++ ++E+ V I +++RG+ A + E+ +G ++E G+ T
Sbjct: 197 LQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGK-------HQEAVGI-WFKT 248
Query: 231 AGIGKDVKRVVRVRPNVH---------TFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
GK +K +V + T+N ++ G ++ E+ + +M R G +PD
Sbjct: 249 LNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPD 308
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
++++ L+ +C +M E L ++M+ + ++ D+V+Y TII G C+ ++ +A+E+
Sbjct: 309 LFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLT 368
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
E+ G++ + + L+ GY R GD+ AI M G +P T L+ +C
Sbjct: 369 ELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAG 428
Query: 402 RVFEALDIL---KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
V EA I + V G+ Y +I+G C+ GKM EA+ EM +G P+
Sbjct: 429 LVEEAKTIFSQARENNVDLGVI----GYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNK 484
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
Y+ + Y K GN E A+ L EM + V
Sbjct: 485 LTYTTLMYAYSKSGNSEEASKLFDEMVGSGV 515
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PNV +NAL+ G+ R G D M G +P +Y LM C + EA+
Sbjct: 375 LKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAK 434
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
++ + R+ NV+ V+ Y +I G+C++G+M A +F EM G+ + +T+ L+ Y
Sbjct: 435 TIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAY 494
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
++G+ + A ++++M G P+ T LI +K
Sbjct: 495 SKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEK 532
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE-RRMRE 300
+++P T+N + +EG E+ E + +M +G C ++ ++A + RR+
Sbjct: 146 KMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLES 205
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE-----------------MARAEEFFREM 343
+ EM + + + + C+ G+ M A + + M
Sbjct: 206 VVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTM 265
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G+E S+T+ ++ G C+ ++ AI ++ DM R+GF+P+ T L+ C+ ++
Sbjct: 266 LNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKM 325
Query: 404 ---FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
F LD +K GL P SY +I G C+ + +A + E++ +G +P++ I
Sbjct: 326 EETFHLLDQMKTE----GLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFI 381
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
Y+A I GY + G++ A + M N ++
Sbjct: 382 YNALIGGYGRNGDISGAIDAVETMKSNGIQ 411
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 142/348 (40%), Gaps = 68/348 (19%)
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVH 248
SR +++ + A+I + + V +G+E+ E++ AG+ +P V
Sbjct: 4 SRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELW------RAGL----------QPTVV 47
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N LM + G E+ + M + G P ++ +L+ R E + +EM
Sbjct: 48 TYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEM 107
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD- 367
V + V YN +IG C G ++A F EM L ++ ++VT+ + C+ G+
Sbjct: 108 EQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEM 167
Query: 368 -----------------------------------VDSAILVYNDMCRKGFEPEGSTIEV 392
++S + + N+M +G P +
Sbjct: 168 ERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTA 227
Query: 393 LIGELCDKRRVFEALDIL-----KARVVK-----------FGLFPTEKSYMFLIKGLCEE 436
+ ELC + EA+ I K + +K G+ +Y +I+G C++
Sbjct: 228 CMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKD 287
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
KMEEA+K+ +M +GF+P L ++ + Y G +E L +M
Sbjct: 288 SKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQM 335
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 86/230 (37%), Gaps = 40/230 (17%)
Query: 139 PKLKLFEVLVKTYRECGSAPFVFDLL------------------IKCCLEVKNIEKIETC 180
P L F L+ Y G F LL I + K+I K +
Sbjct: 307 PDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAK-- 364
Query: 181 VDIVRMLMSRGLSVKVSTCNALIWEVSRG---KGVISGYEIYREVFGLDSDAT------- 230
+ + LM RGL V NALI R G I E + ++ T
Sbjct: 365 -EYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYW 423
Query: 231 ---AGIGKDVKRVV-RVRPN-----VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
AG+ ++ K + + R N V + ++ G+ + G + + EM G P+
Sbjct: 424 MCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPN 483
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
+Y+ LM + + EA KL++EM V D + Y T+I E G
Sbjct: 484 KLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKG 533
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 130/251 (51%), Gaps = 4/251 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R RP+ + NAL+ G + E + R PD Y+++ +++ C ++R+A
Sbjct: 151 RHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKA 210
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCE---IGEMARAEEFFREMGLSGVESSSVTFEHL 358
+ ++++ + V YN++I G+C+ G M + +EM +G+ ++VTF L
Sbjct: 211 GDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+NGYC+ + +A+ V+ +M ++G T LI LC + +V E + +++ + G
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLME-EMEDLG 329
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
L P E ++ ++KG C++G M +A M + EP + IY+ ID Y + G +E A
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389
Query: 479 MLRKEMFENQV 489
+++ M + +
Sbjct: 390 AVKEAMAKKGI 400
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 23/335 (6%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI---YREVFGLDSDAT 230
I ++ D+ + + + GL+ V+T N+LI + G + Y + +E+ T
Sbjct: 204 IGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPT 263
Query: 231 A--------GIGKDVKRVVRVR-----------PNVHTFNALMVGFYREGAFEKVEDVWV 271
A G K+ VR +V T+N+L+ G EG E+ +
Sbjct: 264 AVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLME 323
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM LG P+ ++ ++ FC++ M +A + M ++NVE DVV YN +I + +G
Sbjct: 324 EMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLG 383
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+M A M G+ + T+ L+ G+ R+GD SA + ++M KG E + T
Sbjct: 384 KMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYN 443
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
VLIG LC K V +A+ +L + + GL P +Y +I+G C++G ++ A +++ M
Sbjct: 444 VLIGALCCKGEVRKAVKLLD-EMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
++ Y+ FI + + G ++ A L EM +
Sbjct: 503 CRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 147/331 (44%), Gaps = 24/331 (7%)
Query: 145 EVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
++L+K E G +P F +LI + N V + + +G++ V T N+L
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTA---AAVRVFEEMKQQGIAASVVTYNSL 305
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
I + V G ++ E+ L + PN TF ++ GF ++G
Sbjct: 306 ISGLCSEGKVEEGVKLMEEMEDLG----------------LSPNEITFGCVLKGFCKKGM 349
Query: 263 FEKVEDVWVE-MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
D W++ M EPD Y++L+ V+ +M +A + E M K + +V YN
Sbjct: 350 MADAND-WIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYN 408
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
+I GF G+ A EM G+E+ VT+ L+ C G+V A+ + ++M
Sbjct: 409 CLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEV 468
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G EP T +I CDK + A +I + R+ K +Y IK C+ GKM+E
Sbjct: 469 GLEPNHLTYNTIIQGFCDKGNIKSAYEI-RTRMEKCRKRANVVTYNVFIKYFCQIGKMDE 527
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
A + EM+ K P+ Y +G M++G
Sbjct: 528 ANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 4/216 (1%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P S + L+A +R+ AEK + + V D+ +NT+I G C IG++ +A +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 340 FREMGLSGVESSSVTFEHLVNGYCR---AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+++ G+ S T+ L++GYC+ AG++ ++ +M G P T VLI
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
C A+ + + + + G+ + +Y LI GLC EGK+EE +K+ EM G P
Sbjct: 274 YCKNSNTAAAVRVFE-EMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ + + G+ K+G + A M E V +
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
+P + ++ +L+ YR G K+E + + + +G+S V+
Sbjct: 366 EPDVVIYNILIDVYRRLG--------------------KMEDAMAVKEAMAKKGISPNVT 405
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGL-DSDATAGIGKDVKRVVRVRPNVHTFNALMVG 256
T N LI SR +R GL D GI DV T+N L+
Sbjct: 406 TYNCLITGFSRSGD-------WRSASGLLDEMKEKGIEADVV----------TYNVLIGA 448
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
+G K + EM+ +G EP+ +Y+ ++ FC++ ++ A ++ M +
Sbjct: 449 LCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRAN 508
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
VV YN I FC+IG+M A + EM + + +T+E + G G
Sbjct: 509 VVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 120/221 (54%), Gaps = 3/221 (1%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
VHTF+AL+ + R G + + M GC PD ++S++++ C++RR EA+ ++
Sbjct: 213 VHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFD 272
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
++ + E DVV Y +++ G+C G++++AEE F +M ++G++ + T+ +++ CR G
Sbjct: 273 SLKHR-FEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCG 331
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
+ A V+++M G +P T L+ R + L + ++ + G SY
Sbjct: 332 QITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYN-QMKRLGCPADTISY 390
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
F+I+ C + +EEA K+ MV KG P+ ++ FI G
Sbjct: 391 NFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFN-FIFG 430
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 140/326 (42%), Gaps = 23/326 (7%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR--EVFGLDSDATA--------- 231
++ ++ SRG+ + V T +AL+ R + E +G D A
Sbjct: 200 VIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLC 259
Query: 232 ---------GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+K R P+V + +L+ G+ R G K E+V+ +M G +P+
Sbjct: 260 KKRRANEAQSFFDSLKH--RFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNV 317
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
Y+YS+++ C ++ A ++ EM D + + V +N+++ + G + + + +
Sbjct: 318 YTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQ 377
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G + ++++ ++ +CR +++ A + N M +KG P ST + G +
Sbjct: 378 MKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHD 437
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
V A + AR+ + P +Y L++ E + LK++ EM EP++ Y
Sbjct: 438 VNGA-HRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYR 496
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQ 488
I + + A L EM E +
Sbjct: 497 ILISMFCDMKHWNNAYKLMMEMVEEK 522
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 128/295 (43%), Gaps = 19/295 (6%)
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
V+ L+ +I K E ++M G+ V T + +I + R + ++++
Sbjct: 284 VYTSLVHGWCRAGDISKAEEVFSDMKMA---GIKPNVYTYSIVIDSLCRCGQITRAHDVF 340
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
E+ D PN TFN+LM + G EKV V+ +M RLGC
Sbjct: 341 SEMIDAGCD----------------PNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCP 384
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
D SY+ ++ C + + EA K+ M K V + +N I G ++ ++ A
Sbjct: 385 ADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRM 444
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+ M + +++T+ L+ + + D + + +M EP +T +LI CD
Sbjct: 445 YARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCD 504
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
+ A ++ V + L P Y +++ L + G++++ ++ +MV +GF
Sbjct: 505 MKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKHEELVDKMVARGF 559
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 129/254 (50%), Gaps = 6/254 (2%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
V PN +++ L+ G G E+ + +M GC+P +Y+VL+ C+ + +
Sbjct: 260 VTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDK 319
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L++EM + + +V Y +I G C G++ A R+M + S +T+ L+N
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
GYC+ G V A + M ++ +P T L+ LC + ++A+ +LK R++ GL
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK-RMLDNGLS 438
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT-- 478
P SY LI GLC EG M A K+ + M EP ++A I+ + K+G ++A+
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498
Query: 479 ---MLRKEMFENQV 489
MLRK + ++V
Sbjct: 499 LGLMLRKGISLDEV 512
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 166/389 (42%), Gaps = 42/389 (10%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN--DPKLKLFE 145
AL+ F + C + SY+ +IH L +G + + + E P + +
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCE---VGRLEEAFGLKDQMGEKGCQPSTRTYT 305
Query: 146 VLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWE 205
VL+K + G F+L + ++ RG V T LI
Sbjct: 306 VLIKALCDRGLIDKAFNLFDE--------------------MIPRGCKPNVHTYTVLIDG 345
Query: 206 VSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEK 265
+ R + + R++ KD R+ P+V T+NAL+ G+ ++G
Sbjct: 346 LCRDGKIEEANGVCRKMV-----------KD-----RIFPSVITYNALINGYCKDGRVVP 389
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
++ M + C+P+ +++ LM C + +A L + M D + D+V+YN +I
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
G C G M A + M +E +TF ++N +C+ G D A M RKG
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+ T LI +C + +AL IL+ +VK + T S ++ L + K++E L +
Sbjct: 510 DEVTGTTLIDGVCKVGKTRDALFILET-LVKMRILTTPHSLNVILDMLSKGCKVKEELAM 568
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
++ G PS+ Y+ +DG ++ G++
Sbjct: 569 LGKINKLGLVPSVVTYTTLVDGLIRSGDI 597
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 122/239 (51%), Gaps = 2/239 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM- 308
+ ++ + G E E ++ ++G D + + L+ FC +R+A K+++ M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
++ + V+Y+ +I G CE+G + A +MG G + S+ T+ L+ C G +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D A ++++M +G +P T VLI LC ++ EA + + ++VK +FP+ +Y
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCR-KMVKDRIFPSVITYNA 376
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
LI G C++G++ A ++ M + +P++ ++ ++G + G A L K M +N
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 112/246 (45%), Gaps = 1/246 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ T+ L+ G +K +++ EM GC+P+ ++Y+VL+ C + ++ EA
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG 357
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ +M + V+ YN +I G+C+ G + A E M + + TF L+ G C
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G A+ + M G P+ + VLI LC + + A +L + F + P
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNC-FDIEPDC 476
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
++ +I C++GK + A M+ KG + IDG K G A + +
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET 536
Query: 484 MFENQV 489
+ + ++
Sbjct: 537 LVKMRI 542
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 21/269 (7%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T+ L+ G R G + M GC P+ Y Y++++ C+ R+ EAEKL
Sbjct: 579 PSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKL 638
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC- 363
M+D V + V Y ++ G+ G++ RA E R M G E + + L+ G+
Sbjct: 639 LSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVL 698
Query: 364 -RAGDVDSAILVYNDMCRKGFEPE------------GSTIE----VLIGELCDKRRVFEA 406
+ G +S +D+ + +PE G I L+ LC + R E+
Sbjct: 699 SQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDES 758
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
D+++ V++ G+F EK+ +++ C + K + +++ ++ GF PS + + I
Sbjct: 759 NDLVQ-NVLERGVF-LEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQ 816
Query: 467 GYMKEGNVEMATMLRKEMF-ENQVRQEDG 494
G KEG+ E A L E+ N V ++ G
Sbjct: 817 GLKKEGDAERARELVMELLTSNGVVEKSG 845
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
++ Y TI+ C+ G AE F ++ G S L+ G+CR ++ A+ V++
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD 254
Query: 377 DMCRK-GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
M ++ P + +LI LC+ R+ EA LK ++ + G P+ ++Y LIK LC+
Sbjct: 255 VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFG-LKDQMGEKGCQPSTRTYTVLIKALCD 313
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G +++A + EM+ +G +P++ Y+ IDG ++G +E A + ++M ++++
Sbjct: 314 RGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 5/207 (2%)
Query: 284 SYSVLMAVFCE----ERRMREAEKLWEEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEE 338
+++V++A+ E E+ M + ++E+R+ + Y++++ ++ A
Sbjct: 122 AHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYV 181
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
+R M G + + +VN C+ G ++A + + + + GF + L+ C
Sbjct: 182 TYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFC 241
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ +AL + + P SY LI GLCE G++EEA ++ +M KG +PS
Sbjct: 242 RGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPST 301
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y+ I G ++ A L EM
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMI 328
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/419 (19%), Positives = 149/419 (35%), Gaps = 103/419 (24%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
CK ++ +Y +I L R I A V R ++ P + + L+ Y + G
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD-RIFPSVITYNALINGYCKDGRVVPA 390
Query: 161 FDLLI-----KCCLEVKN----------IEKIETCVDIVRMLMSRGLSVKVSTCNALIWE 205
F+LL C V+ + K V +++ ++ GLS + + N LI
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 206 VSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEK 265
+ R + + Y++ + D + P+ TF A++ F ++G +
Sbjct: 451 LCREGHMNTAYKLLSSMNCFD----------------IEPDCLTFTAIINAFCKQGKADV 494
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE---EMRDKNVEHD------ 316
M R G D + + L+ C+ + R+A + E +MR H
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 317 --------------------------VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
VV Y T++ G G++ + M LSG
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP 614
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ + ++NG C+ G V+ A + + M G P T
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT--------------------- 653
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
Y ++KG GK++ AL+ MV +G+E + IYS+ + G++
Sbjct: 654 ---------------YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFV 697
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 149/326 (45%), Gaps = 20/326 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
F F+ LI+ L V+ +I + + ++ RG S V T + L+ + G
Sbjct: 252 FTFNPLIRA-LCVRG--RIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESG------- 301
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
YR+ L D R P++ T+N L+ EG ++ ++ + GC
Sbjct: 302 YRQAMAL---------LDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGC 352
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
+PD +Y+ ++ C R +E E+L EM N D V +NTI+ C+ G + RA E
Sbjct: 353 KPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIE 412
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
M G + VT+ +++G C G VD A+ + + + G +P+ ++ LC
Sbjct: 413 VVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLC 472
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ +E + L A ++ P E ++ ++ LC++G ++ A++V +M G P +
Sbjct: 473 STEQ-WERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDI 531
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ IDG E ++ A L ++
Sbjct: 532 VTYNCIIDGLCNESCIDDAMELLSDL 557
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 129/295 (43%), Gaps = 39/295 (13%)
Query: 231 AGIGKDVKRVVR---VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
AG +D +R++ P+ TFN L+ G V+ +M GC P +YS+
Sbjct: 232 AGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSI 291
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA----------- 336
L+ C+E R+A L +EMR K E D+V YN +I C G++ A
Sbjct: 292 LLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHG 351
Query: 337 ------------------------EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
EE EM + VTF +V C+ G VD AI
Sbjct: 352 CKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAI 411
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
V + M G + T ++ LCD RV +A+++L +R+ +G P +Y ++KG
Sbjct: 412 EVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELL-SRLKSYGCKPDTIAYTTVLKG 470
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
LC + E A ++ AEM+ P ++ + ++G V+ A + ++M EN
Sbjct: 471 LCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSEN 525
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 129/275 (46%), Gaps = 10/275 (3%)
Query: 213 ISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVE 272
+ G E ++EV L ++ T+ P+ TFN ++ ++G ++ +V
Sbjct: 366 LCGSERWKEVEELLAEMTSN---------NCAPDEVTFNTIVTSLCQQGLVDRAIEVVDH 416
Query: 273 MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGE 332
M+ GC D +YS ++ C+ R+ +A +L ++ + D +AY T++ G C +
Sbjct: 417 MSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQ 476
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
RAEE EM S VTF +V C+ G VD AI V M G P+ T
Sbjct: 477 WERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNC 536
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
+I LC++ + +A+++L + + G P ++ L+KGLC + E+A ++ A M+
Sbjct: 537 IIDGLCNESCIDDAMELL-SDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRS 595
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
P ++ I ++G + A K M EN
Sbjct: 596 NCPPDELTFNTVITSLCQKGLLTQAIETLKIMAEN 630
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 4/239 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ TFN ++ ++G ++ V +M+ GC PD +Y+ ++ C E + +A +L
Sbjct: 494 PDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMEL 553
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++ + D+V +NT++ G C + AE+ M S +TF ++ C+
Sbjct: 554 LSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQ 613
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + AI M G P ST +++ L + AL++L P
Sbjct: 614 KGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMT---NGTPDLI 670
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT-MLRK 482
+Y +I L + GKMEEAL + MV G P Y + G +E + A MLR+
Sbjct: 671 TYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRR 729
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 5/210 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ TFN ++ ++G + + MA GC P+ +YS+++ + + + A +L
Sbjct: 599 PDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALEL 658
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M N D++ YNT+I + G+M A + R M +G+ + T+ L G CR
Sbjct: 659 LSGM--TNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCR 716
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTI-EVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
D A+ + + G P+ + +VL+G C RR A+D A +V G P E
Sbjct: 717 EDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLG-FCRDRRTDLAIDCF-AHMVSSGCMPDE 774
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+Y+ L++ L G ++EA ++ A + G
Sbjct: 775 STYVILLEALAYGGLLDEAKRLLASLCSLG 804
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 15/280 (5%)
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
R + ++ EI + DS A+ G G++ P V N L+ +G E
Sbjct: 156 RLRSLVQRGEIDEALVLFDSMASGG-GRNC-------PPVVPCNILIKRLCSDGRVSDAE 207
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
V+ A LG +Y+ ++ +C R+ +A +L M D +N +I
Sbjct: 208 RVF---AALGPSATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRAL 261
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C G + A F +M G S VT+ L++ C+ A+ + ++M KG EP+
Sbjct: 262 CVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDI 321
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T VLI +C++ V EAL+IL + + G P +Y ++K LC + +E ++ A
Sbjct: 322 VTYNVLINAMCNEGDVDEALNIL-SNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLA 380
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
EM P ++ + ++G V+ A + M E+
Sbjct: 381 EMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEH 420
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 13/217 (5%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P ++L+ C + R+ +AE+++ + VV YNT++ G+C G + A
Sbjct: 185 PPVVPCNILIKRLCSDGRVSDAERVFAAL---GPSATVVTYNTMVNGYCRAGRIEDARRL 241
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
M + TF L+ C G + A+ V++DM +G P T +L+ C
Sbjct: 242 INGMPF---PPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCK 298
Query: 400 K---RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
+ R+ LD ++A+ G P +Y LI +C EG ++EAL + + + G +P
Sbjct: 299 ESGYRQAMALLDEMRAK----GCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKP 354
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
Y+ + + L EM N ++
Sbjct: 355 DAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDE 391
>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 412
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 123/241 (51%), Gaps = 1/241 (0%)
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+H L EG ++ ++V M + G P+ +YS LM +C + A+ ++
Sbjct: 135 LHVALPLWYNANNEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFS 194
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
M + V +V +YN +I GFC+I A F EM + VT+ L+NG C++G
Sbjct: 195 TMSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSG 254
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY 426
+ A+ + ++M +G P+ T L+ LC +V +A+ +LK + G+ P +Y
Sbjct: 255 KISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLK-NLKDQGIRPNMYTY 313
Query: 427 MFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI GLC+ G++E+A + +++ KG+ ++ Y+ I G+ +G + A L +M +
Sbjct: 314 TILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKD 373
Query: 487 N 487
N
Sbjct: 374 N 374
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 120/243 (49%), Gaps = 1/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN T+++LM G+ + ++ M+ G + +SY++++ FC+ + EA
Sbjct: 166 INPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAM 225
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+EEM + + DVV YN++I G C+ G+++ A + EM G +T+ L++
Sbjct: 226 NLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDAL 285
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ VD AI + ++ +G P T +LI LC R+ +A +I + +VK G T
Sbjct: 286 CKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVK-GYNIT 344
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y +I G C +G +EAL + ++M P+ Y I + A L +
Sbjct: 345 VNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAENLLR 404
Query: 483 EMF 485
EM
Sbjct: 405 EMI 407
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 86/175 (49%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V T+N+L+ G + G + EM G PD +YS L+ C+ ++ +A
Sbjct: 235 KLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKA 294
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L + ++D+ + ++ Y +I G C+ G + A F ++ + G + T+ +++G
Sbjct: 295 IALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHG 354
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
+C G D A+ + + M P T E++I L D +A ++L+ + +
Sbjct: 355 FCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAENLLREMITR 409
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 38/198 (19%)
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
E ++EA+ + M + + + V Y++++ G+C + E+ A+ F M L GV ++
Sbjct: 147 NEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVW 206
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDM-CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
++ ++NG+C+ D A+ ++ +M CRK
Sbjct: 207 SYNIMINGFCKIKMTDEAMNLFEEMHCRK------------------------------- 235
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
L P +Y LI GLC+ GK+ ALK+ EM +G P + YS+ +D K
Sbjct: 236 ------LIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNH 289
Query: 473 NVEMATMLRKEMFENQVR 490
V+ A L K + + +R
Sbjct: 290 QVDKAIALLKNLKDQGIR 307
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RPN++T+ L+ G + G E +++ ++ G +Y+V++ FC + EA
Sbjct: 306 IRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAL 365
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
L +M+D + + + Y II + E +AE REM G+
Sbjct: 366 ALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAENLLREMITRGL 411
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 64/139 (46%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T+++L+ + +K + + G P+ Y+Y++L+ C+ R+ +A +
Sbjct: 273 PDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNI 332
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E++ K V Y +I GFC G A +M + +++T+E ++
Sbjct: 333 FEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFD 392
Query: 365 AGDVDSAILVYNDMCRKGF 383
+ D A + +M +G
Sbjct: 393 NDENDKAENLLREMITRGL 411
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/467 (20%), Positives = 195/467 (41%), Gaps = 46/467 (9%)
Query: 24 SQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKN 83
S T S Q + I ++S T + ++ LL+ L+P ++ L N
Sbjct: 53 SSVETQVSANDVSQDADKICKILSKFTDSKVET----LLNEASVKLSPALIEEVLKKLSN 108
Query: 84 NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKL 143
LAL F + +++ KH+ S+Y +I L + + + KL
Sbjct: 109 AGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIK--------------------QFKL 148
Query: 144 FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI 203
LV ++ D K++ + + G ++ S N ++
Sbjct: 149 IWNLVDDMKQ--KKLLSKDTFALISRRYARARKVKEAITAFHKMEDYGFKMESSDFNRML 206
Query: 204 WEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAF 263
+S+ + V +++ D + R P++ ++ L+ G+ +E
Sbjct: 207 DILSKSRNVGDAQKVF----------------DKMKKKRFEPDIKSYTILLEGWGQELNL 250
Query: 264 EKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTI 323
+V +V+ EM G EPD +Y +++ +C+ ++ EA + + EM +N + + ++
Sbjct: 251 LRVNEVYGEMKDEGFEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSL 310
Query: 324 IGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGF 383
I G ++ A EFF SG + T+ LV YC + ++ A ++M KG
Sbjct: 311 INGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGI 370
Query: 384 EPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
P T ++++ L +R EA ++ + K PT +Y +++ C + +++ A+
Sbjct: 371 GPNARTYDIILHHLIRMQRTKEAYEVYQ----KMSCEPTVSTYEIMVRMFCNKERLDMAI 426
Query: 444 KVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
K+ EM GKG P + ++S+ I E ++ A EM + +R
Sbjct: 427 KIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIR 473
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 28/258 (10%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRM 186
+I ++ + D ++ F + + R C +P +F LI K K+ ++
Sbjct: 275 IINAYCKAKKYDEAVRFFNEMEQ--RNCKPSPHIFCSLINGLGSEK---KLNDALEFFER 329
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG-LDSDATAGIGKDVKRVVRVRP 245
S G ++ T NAL+ G + + F +D + GIG P
Sbjct: 330 SKSSGFPLEAPTYNALV-------GAYCWSQRMEDAFKTVDEMRSKGIG----------P 372
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T++ ++ R ++ ++ + ++ CEP +Y +++ +FC + R+ A K+W
Sbjct: 373 NARTYDIILHHLIR---MQRTKEAYEVYQKMSCEPTVSTYEIMVRMFCNKERLDMAIKIW 429
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EM+ K V + ++++I C ++ A E+F EM G+ F L
Sbjct: 430 DEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHLFSRLKQTLLDE 489
Query: 366 GDVD--SAILVYNDMCRK 381
G D + + V D RK
Sbjct: 490 GRKDKVADLAVKMDRLRK 507
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 249 TFNALMVGFY-----REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
T+NAL VG Y E AF+ V+ EM G P+ +Y +++ +R +EA +
Sbjct: 341 TYNAL-VGAYCWSQRMEDAFKTVD----EMRSKGIGPNARTYDIILHHLIRMQRTKEAYE 395
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++++M + E V Y ++ FC + A + + EM GV F L+ C
Sbjct: 396 VYQKM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALC 452
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
+D A +N+M G P G L L D+ R + D+
Sbjct: 453 HENKLDEACEYFNEMLDVGIRPPGHLFSRLKQTLLDEGRKDKVADL 498
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 31/267 (11%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
RV+P V +N ++ E F+ + ++ M + G EP+ ++Y++L+ C+ R+ A
Sbjct: 141 RVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGA 200
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE----------------------- 338
KL EM K + D V+Y T+I C++G++ A E
Sbjct: 201 HKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEY 260
Query: 339 -------FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
EM G++ + +++ ++N AG+V+ ++ V M +G P T
Sbjct: 261 TFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFT 320
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
LI K EALD R+++ G+ P +Y L+ GLC + + +A+ V +M
Sbjct: 321 SLIKGFFLKGGSHEALDFWD-RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEI 379
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMAT 478
G P++ YSA IDGY K G+++ A+
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGAS 406
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 145/329 (44%), Gaps = 20/329 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALI---------------WEVSRGKGVISGYEIYR 220
+E + ++ + +RG S + T +LI W+ +GV+ Y
Sbjct: 296 NVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYN 355
Query: 221 EVF-GLDSDATAGIGKDVKRVVRVR---PNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+ GL S + G V + + PNV T++AL+ G+ + G + +VW M
Sbjct: 356 ALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITH 415
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
GC P+ +Y+ ++ V C +A L E M+ +N + V +NT I G C G + A
Sbjct: 416 GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWA 475
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+ F +MG SG ++ T+ L++ + A + DM +G E T +I
Sbjct: 476 IKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYG 535
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
C + EAL++L VV+ G P + +I C++GK+ A+++ + + P
Sbjct: 536 YCCAGMLGEALELLGKMVVR-GTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHP 594
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+ Y++ I G VE A + + M
Sbjct: 595 DIIAYTSLISGICTHIGVEEAIVYLRRML 623
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV ++ ++ G E V +M GC P+ ++++ L+ F + EA
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL 336
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
W+ M + V +VVAYN ++ G C + A F +M ++G + T+ L++GY
Sbjct: 337 DFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGY 396
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+AGD+D A V+N M G P ++ LC +A +++ V+ P
Sbjct: 397 AKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVE-NCPPN 455
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ IKGLC G+++ A+KV +M G P+ Y+ +D +K+ A L K
Sbjct: 456 TVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVK 515
Query: 483 EM 484
+M
Sbjct: 516 DM 517
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 9/205 (4%)
Query: 284 SYSVLMAVFCEERRMREAE---KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
S + ++V RR +E K + M+D V+ V YN I+ + +
Sbjct: 110 SEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIY 169
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
M G+E + T+ L+ C+ VD A + +M KG +P+ + LI LC
Sbjct: 170 SNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKL 229
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
+V EA R + P+ Y LI G+C+E EEA ++ EM+ KG +P++
Sbjct: 230 GKVKEA------RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVIS 283
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMF 485
Y+ I+ GNVE++ + +MF
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMF 308
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
+Y +++ ER M + L ++M+ + + + ++IG + G +A + F M
Sbjct: 78 TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
V+ + + H+++ +Y++M + G EP T +L+ LC RV
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
A +L K G P E SY LI LC+ GK++EA ++ F PS+ +Y+A
Sbjct: 198 DGAHKLLVEMSSK-GCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNA 251
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQV 489
I+G KE E A L EM +
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGI 277
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 69/153 (45%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N L+ ++ F + + +M G E + +Y+ ++ +C + EA +L
Sbjct: 489 PNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALEL 548
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M + + D + N +I +C+ G++ A + + + + L++G C
Sbjct: 549 LGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICT 608
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
V+ AI+ M +G P +T VL+ L
Sbjct: 609 HIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 118/233 (50%), Gaps = 1/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V ++NA+M G F++ V++ M +G PD Y++++ + FC +R A +L
Sbjct: 109 PSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRL 168
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M + + + VAY T++ GF E A E F +M G+ TF L++ C+
Sbjct: 169 LNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCK 228
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+V + + N + +KG T + I LC K + A+ +L + V++ GL P
Sbjct: 229 KGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDS-VIREGLTPDVV 287
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI GLC+ + EA K ++V G EP Y+ IDGY K G ++ A
Sbjct: 288 TYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNA 340
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 1/247 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ TFN + G R+G + + R G PD +Y+ L+ C+ + EAEK
Sbjct: 250 NLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYL 309
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++ + +E D YNT+I G+C++G + AE+ + G T+ L+NG C+
Sbjct: 310 HKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQN 369
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
++D A+ ++N KG +P +LI LC + + +AL ++ + + G +
Sbjct: 370 DEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMN-EMSENGCSSDIWT 428
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I GLC+ G + +A + + + KG+ P + ++ IDGY K+ +E + +M+
Sbjct: 429 YNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMW 488
Query: 486 ENQVRQE 492
+ V +
Sbjct: 489 SHGVTPD 495
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 121/242 (50%), Gaps = 1/242 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N + ++ GFY E + +++ +M R+G PD +++ L+ C++ ++E+E+L
Sbjct: 180 NAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLL 239
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
++ K + ++ +N I G C G ++ A + G+ VT+ L+ G C+
Sbjct: 240 NKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKN 299
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
+V A + + G EP+G T LI C + A IL+ + K G P E +
Sbjct: 300 SNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICK-GFVPDEFT 358
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI GLC+ +++ AL + +GKG +P++ +Y+ I G +EG + A + EM
Sbjct: 359 YCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMS 418
Query: 486 EN 487
EN
Sbjct: 419 EN 420
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 124/243 (51%), Gaps = 1/243 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ + P+V TFN L+ ++G ++ E + ++ + G + +++++ + C + +
Sbjct: 210 IGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSG 269
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A + + + + + DVV YNT+I G C+ + AE++ ++ G+E T+ L++
Sbjct: 270 AMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLID 329
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
GYC+ G + +A + KGF P+ T LI LC + AL + A + K GL
Sbjct: 330 GYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGK-GLK 388
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
PT Y LIKGLC+EG + +AL++ EM G + Y+ I+G K G V A L
Sbjct: 389 PTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNL 448
Query: 481 RKE 483
+
Sbjct: 449 MND 451
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/462 (22%), Positives = 188/462 (40%), Gaps = 89/462 (19%)
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILS----RARLIGPARDVIRVALRSPENDPK 140
PH ALR + + C+ + +Y T++ R D++R+ + P
Sbjct: 162 PHSALRLLNNMVSQG-CQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIF-----PD 215
Query: 141 LKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
+ F L+ T + G EV+ E++ + ++ +G+ + T N
Sbjct: 216 VSTFNKLLHTLCKKG--------------EVQESERL------LNKVLKKGMCSNLFTFN 255
Query: 201 ALIWEVSRGKGVISGY-----EIYREVFGLDSDATA------GIGKD---------VKRV 240
I + R KG++SG + RE GL D G+ K+ + ++
Sbjct: 256 IFIQGLCR-KGMLSGAMSMLDSVIRE--GLTPDVVTYNTLICGLCKNSNVVEAEKYLHKL 312
Query: 241 VR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM 298
V + P+ T+N L+ G+ + G + E + G PD ++Y L+ C+ +
Sbjct: 313 VNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEI 372
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
A L+ K ++ V+ YN +I G C+ G + +A + EM +G S T+ +
Sbjct: 373 DRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLV 432
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA------ 412
+NG C+ G V A + ND KG+ P+ T LI C + ++ + IL
Sbjct: 433 INGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGV 492
Query: 413 ----------------------------RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
+V+ G P + +Y L + LC+ GK+ EAL
Sbjct: 493 TPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALD 552
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ E++ KG P ++ I G+ G+++ A L + M E
Sbjct: 553 LVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGE 594
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 143/325 (44%), Gaps = 45/325 (13%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFV 160
C + +Y +I+ L + + A +++ A+ + P + F L+ Y
Sbjct: 422 CSSDIWTYNLVINGLCKMGCVSDANNLMNDAI-AKGYVPDVFTFNTLIDGY--------- 471
Query: 161 FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG---KGVISGYE 217
C ++K +ET + I+ + S G++ V T N+++ +S+ + ++ +E
Sbjct: 472 -------CKQLK----METTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFE 520
Query: 218 IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
E K V PN T+N L + G + D+ E+ G
Sbjct: 521 TMVE----------------KGCV---PNKITYNILTESLCKAGKVNEALDLVDEILNKG 561
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK-NVEHDVVAYNTIIGGFCEIGEMARA 336
PD S++ +++ F ++ A +L+ M ++ V H YN +I F E ++
Sbjct: 562 ITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMG 621
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
E+ F EMG G + T+ +++G+C G+ DS +M KGF P +T +I
Sbjct: 622 EKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINC 681
Query: 397 LCDKRRVFEALDILKARVVKFGLFP 421
LC + RV EA+DI+ +V G+ P
Sbjct: 682 LCVQHRVHEAVDIIHF-MVHNGIVP 705
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 105/241 (43%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ T+N ++ G + G ++ + G PD ++++ L+ +C++ +M ++
Sbjct: 425 DIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQIL 484
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M V DV+ YN+++ G + + E F M G + +T+ L C+A
Sbjct: 485 NKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKA 544
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G V+ A+ + +++ KG P+ + +I + + A + + ++ + T +
Sbjct: 545 GKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTAT 604
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y +I E+ + K+ EM G P Y IDG+ GN + EM
Sbjct: 605 YNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMI 664
Query: 486 E 486
E
Sbjct: 665 E 665
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P VH F L+ G FE+ E V+ ++ + GC+ D ++Y+VL+ F ++ A ++
Sbjct: 63 PTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEM 122
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM+ K E D Y ++ + G + A FF M G+ + T+ L++ + +
Sbjct: 123 FREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRK 182
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G +D A+ ++ +M R+GF+P T +L+ LC RV A + ++ G P
Sbjct: 183 VGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFH-KMTGDGCSPDSY 241
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L+ GL + G++EEA KV EMV +G L Y++ + K GN++ L KEM
Sbjct: 242 TYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEM 301
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 151/350 (43%), Gaps = 23/350 (6%)
Query: 154 CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVI 213
C F LI + E+ E + + L+ +G + N LI R +
Sbjct: 61 CSPTVHAFTKLIDILVNSGEFERAEL---VYKKLVQKGCQLDRFAYNVLIRYFGRSGQLD 117
Query: 214 SGYEIYREV-----------FGLDSDATAGIGK--------DVKRVVRVRPNVHTFNALM 254
S E++RE+ +G +A G+ D + PN+ T+N LM
Sbjct: 118 SAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLM 177
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
F + G + ++ EM R G +P +Y++L+ C R+ A KL+ +M
Sbjct: 178 DAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCS 237
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
D Y+T++ G + G + A + FREM GV V + L+ +AG++D +
Sbjct: 238 PDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKL 297
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
+M RKGF P+ + ++ L + A ++ AR+V+ G P SY LI
Sbjct: 298 MKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVF-ARMVESGCKPDLISYNILIDSYA 356
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
G +A ++ EMV GF P + Y++ I +G V+ A + +EM
Sbjct: 357 RFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEM 406
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 192/428 (44%), Gaps = 60/428 (14%)
Query: 91 FFSFTQHKSL-CKHSLSSYATIIHIL------SRARLI-------GPARD------VIRV 130
F F Q +S C ++ ++ +I IL RA L+ G D +IR
Sbjct: 50 FDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRY 109
Query: 131 ALRSPENDPKLKLF-EVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRML 187
RS + D +++F E+ +K GS P + + L+ + +++ + D +
Sbjct: 110 FGRSGQLDSAMEMFREMKIK-----GSEPDEYTYGFLVNALGKAGRVQEARSFFDA---M 161
Query: 188 MSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNV 247
+ RGL+ + T N L+ + +R+V LD G+ ++KR +P+V
Sbjct: 162 LERGLTPNIPTYNLLM-------------DAFRKVGQLD--MALGLFAEMKRR-GFQPSV 205
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
T+N L+ G ++ +M GC PD Y+YS L+ + R+ EA K++ E
Sbjct: 206 VTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFRE 265
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M D+ V D+V YN+++ + G M R + +EM G + +F +++ +A
Sbjct: 266 MVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANK 325
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLI------GELCDKRRVFEALDILKARVVKFGLFP 421
D+A V+ M G +P+ + +LI G+ R++ E + V+ G P
Sbjct: 326 PDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEM-------VEAGFIP 378
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
K+Y LI L +G+++EA V EM G P + Y+ +D K G + A L
Sbjct: 379 ETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLF 438
Query: 482 KEMFENQV 489
++M + V
Sbjct: 439 QQMKDKGV 446
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 115/250 (46%), Gaps = 9/250 (3%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RPN T L+ + R D++ + C P ++++ L+ + AE
Sbjct: 28 LRPN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAE 85
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++++ K + D AYN +I F G++ A E FREM + G E T+ LVN
Sbjct: 86 LVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNAL 145
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVKFGL 419
+AG V A ++ M +G P T +L+ D R LD+ L A + + G
Sbjct: 146 GKAGRVQEARSFFDAMLERGLTPNIPTYNLLM----DAFRKVGQLDMALGLFAEMKRRGF 201
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P+ +Y L+ LC G++ A K+ +M G G P YS ++G K G VE A
Sbjct: 202 QPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHK 261
Query: 480 LRKEMFENQV 489
+ +EM + V
Sbjct: 262 VFREMVDRGV 271
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 165/399 (41%), Gaps = 47/399 (11%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+Y +++ L +A + AR L P + + +L+ +R+ G D+ +
Sbjct: 137 TYGFLVNALGKAGRVQEARSFFDAMLERGLT-PNIPTYNLLMDAFRKVGQ----LDMALG 191
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFG-- 224
E+K RG V T N L+ + V + +++ ++ G
Sbjct: 192 LFAEMKR----------------RGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDG 235
Query: 225 ------LDSDATAGIGK-----DVKRVVR------VRPNVHTFNALMVGFYREGAFEKVE 267
S G+GK + +V R V ++ +N+L+ + G ++V
Sbjct: 236 CSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVW 295
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
+ EM+R G PD +S++ +M + + A +++ M + + D+++YN +I +
Sbjct: 296 KLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSY 355
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
G+ A+A + EM +G + T+ L++ G VD A V +M G P+
Sbjct: 356 ARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDV 415
Query: 388 STIEVL---IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
T L +G+ + +R +K + G+ P SY I GL + +++EAL
Sbjct: 416 VTYNRLMDMLGKRGENQRAARLFQQMKDK----GVEPDTLSYAVRIDGLAFDDRLDEALV 471
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+ +M G +Y I + G+ E+ L+ E
Sbjct: 472 LFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHE 510
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 96/245 (39%), Gaps = 39/245 (15%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
S+ TI+ L +A AR+V + S P L + +L+ +Y G A +L +
Sbjct: 312 SFNTIMDALGKANKPDAAREVFARMVESG-CKPDLISYNILIDSYARFGDAAQARQMLEE 370
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI-WEVSRGKGVISGYEIYREVFGL 225
++ G + T N+LI W + G+ V + + E+
Sbjct: 371 --------------------MVEAGFIPETKTYNSLIHWLATDGQ-VDEAFAVLEEM--- 406
Query: 226 DSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
TAG RP+V T+N LM + G ++ ++ +M G EPD SY
Sbjct: 407 ---ETAG----------CRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSY 453
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+V + + R+ EA L+++M+ D Y +I G+ + E
Sbjct: 454 AVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHESQF 513
Query: 346 SGVES 350
VES
Sbjct: 514 MPVES 518
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 130/251 (51%), Gaps = 4/251 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R RP+ + NAL+ G + E + R PD Y+++ +++ C ++R+A
Sbjct: 151 RHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKA 210
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCE---IGEMARAEEFFREMGLSGVESSSVTFEHL 358
+ ++++ + V YN++I G+C+ G M + +EM +G+ ++VTF L
Sbjct: 211 GDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFG 418
+NGYC+ + +A+ V+ +M ++G T LI LC + +V E + +++ + G
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLME-EMEDLG 329
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
L P E ++ ++KG C++G M +A M + EP + IY+ ID Y + G +E A
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389
Query: 479 MLRKEMFENQV 489
+++ M + +
Sbjct: 390 AVKEAMAKKGI 400
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 23/335 (6%)
Query: 174 IEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI---YREVFGLDSDAT 230
I ++ D+ + + + GL+ V+T N+LI + G + Y + +E+ T
Sbjct: 204 IGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPT 263
Query: 231 A--------GIGKDVKRVVRVR-----------PNVHTFNALMVGFYREGAFEKVEDVWV 271
A G K+ VR +V T+N+L+ G EG E+ +
Sbjct: 264 AVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLME 323
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
EM LG P+ ++ ++ FC++ M +A + M ++NVE DVV YN +I + +G
Sbjct: 324 EMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLG 383
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+M A M G+ + T+ L+ G+ R+GD SA + ++M KG E + T
Sbjct: 384 KMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYN 443
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
VLIG LC K V +A+ +L + + GL P +Y +I+G C++G ++ A +++ M
Sbjct: 444 VLIGALCCKGEVRKAVKLLD-EMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
++ Y+ FI + + G ++ A L EM +
Sbjct: 503 CRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 147/331 (44%), Gaps = 24/331 (7%)
Query: 145 EVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
++L+K E G +P F +LI + N V + + +G++ V T N+L
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTA---AAVRVFEEMKQQGIAASVVTYNSL 305
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
I + V G ++ E+ L + PN TF ++ GF ++G
Sbjct: 306 ISGLCSEGKVEEGVKLMEEMEDLG----------------LSPNEITFGCVLKGFCKKGM 349
Query: 263 FEKVEDVWVE-MARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
D W++ M EPD Y++L+ V+ +M +A + E M K + +V YN
Sbjct: 350 MADAND-WIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYN 408
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
+I GF G+ A EM G+E+ VT+ L+ C G+V A+ + ++M
Sbjct: 409 CLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEV 468
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G EP T +I CDK + A +I + R+ K +Y IK C+ GKM+E
Sbjct: 469 GLEPNHLTYNTIIQGFCDKGNIKSAYEI-RTRMEKCRKRANVVTYNVFIKYFCQIGKMDE 527
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
A + EM+ K P+ Y +G M++G
Sbjct: 528 ANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 4/216 (1%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P S + L+A +R+ AEK + + V D+ +NT+I G C IG++ +A +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 340 FREMGLSGVESSSVTFEHLVNGYCR---AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+++ G+ S T+ L++GYC+ AG++ ++ +M G P T VLI
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
C A+ + + + + G+ + +Y LI GLC EGK+EE +K+ EM G P
Sbjct: 274 YCKNSNTAAAVRVFE-EMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ + + G+ K+G + A M E V +
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
+P + ++ +L+ YR G K+E + + + +G+S V+
Sbjct: 366 EPDVVIYNILIDVYRRLG--------------------KMEDAMAVKEAMAKKGISPNVT 405
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGL-DSDATAGIGKDVKRVVRVRPNVHTFNALMVG 256
T N LI SR +R GL D GI DV T+N L+
Sbjct: 406 TYNCLITGFSRSGD-------WRSASGLLDEMKEKGIEADVV----------TYNVLIGA 448
Query: 257 FYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHD 316
+G K + EM+ +G EP+ +Y+ ++ FC++ ++ A ++ M +
Sbjct: 449 LCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRAN 508
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
VV YN I FC+IG+M A + EM + + +T+E + G G
Sbjct: 509 VVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 183/425 (43%), Gaps = 40/425 (9%)
Query: 67 SGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARD 126
+ ++P +++ L N LAL FF + + + ++ S+ +I L + +
Sbjct: 141 ASVSPQLVAEVLKNLSNAGILALAFFRWAERQQGFVYTADSFHNLIEALGKIK------- 193
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGS-APFVFDLLIKCCLEVKNIEKIETCVDIVR 185
+ +L LV+ R G + F L+++ K++ V+
Sbjct: 194 -------------QFRLVWSLVEAMRCRGLLSKDTFRLIVR---RYARARKVKEAVETFE 237
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
+ GL +S N LI +S+ K V + I++E+ KR R P
Sbjct: 238 KMAGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEM---------------KRNGRFVP 282
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
++ T+ LM G+ E ++ V+ EM G +PD +Y +L++ FC+ + EA K++
Sbjct: 283 DLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVF 342
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
EM Y +I G + A ++F SG T +V YCR+
Sbjct: 343 REMETNGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRS 402
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
A + ++M + G P T ++++ L +++ EA ++ + + K G P +
Sbjct: 403 SKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQG-MSKDGCEPQLNT 461
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y ++ C +++ ALKV +M KG P + ++SA I+G E +E A +EM
Sbjct: 462 YTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQEML 521
Query: 486 ENQVR 490
+ +R
Sbjct: 522 DRGIR 526
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 24/229 (10%)
Query: 148 VKTYRE-----CGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNAL 202
+K +RE C +P V+ +LI + + E+++ + + + G ++V TCNA+
Sbjct: 339 IKVFREMETNGCMPSPHVYCMLIN---GLGSEERLDEALKYFELSKASGFPMEVPTCNAV 395
Query: 203 IWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
+ R +++ +D +GIG PN T++ ++ +
Sbjct: 396 VGAYCRSSKFQHAFKM------VDEMRKSGIG----------PNSRTYDIILHHLIKSQK 439
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
E+ +V+ M++ GCEP +Y++++ +FC R+ A K+W +M++K V + ++
Sbjct: 440 IEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMHMFSA 499
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
+I G C + A +F+EM G+ F +L G + A
Sbjct: 500 LINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNLKEALIEGGRISLA 548
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 127/310 (40%), Gaps = 17/310 (5%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVF 161
K LS Y +I +LS+++ + A + + R+ P LK + VL++ +
Sbjct: 245 KADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGH------EK 298
Query: 162 DLLIKCCLEVKNIEKIETCV--DIVRMLMSRGLSVKVSTCNALI--WEVSRGKGVISGYE 217
DLL+ L+ E ++ + D+V M K C+ I + G +
Sbjct: 299 DLLM---LKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPH 355
Query: 218 IY-REVFGLDSDATAGIGK---DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
+Y + GL S+ ++ + V T NA++ + R F+ + EM
Sbjct: 356 VYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEM 415
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
+ G P+ +Y +++ + +++ EA +++ M E + Y ++G FC +
Sbjct: 416 RKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERV 475
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
A + + +M GV F L+NG C ++ A + +M +G P G L
Sbjct: 476 DVALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNL 535
Query: 394 IGELCDKRRV 403
L + R+
Sbjct: 536 KEALIEGGRI 545
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 120/246 (48%), Gaps = 1/246 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V ++ ++ G+ +G + D++ M G P +++VL+ + + +A +
Sbjct: 359 PDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMII 418
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EMRD V+ VV Y T+I C IG+M A E F +M GV + L+ G+C
Sbjct: 419 FNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCT 478
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A + +++ G + +I LC RV +A +I V GL P
Sbjct: 479 HGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDL-TVNVGLHPDAV 537
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y L+ G C GKME+AL+V MV G EP++ Y ++GY K G ++ L +EM
Sbjct: 538 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597
Query: 485 FENQVR 490
+ ++
Sbjct: 598 LQKGIK 603
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 124/247 (50%), Gaps = 1/247 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P + TFN L+ + G +K ++ EM G +P +Y ++A C +M +A
Sbjct: 392 IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAM 451
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ + +M D+ V D AY+ +I GFC G + +A+E E+ +G+ V F ++N
Sbjct: 452 EKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNL 511
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G V A +++ G P+ +L+ C ++ +AL + A +V G+ P
Sbjct: 512 CKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA-MVSAGIEPN 570
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y L+ G C+ G+++E L + EM+ KG +PS +Y+ IDG + G A +
Sbjct: 571 VVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 630
Query: 483 EMFENQV 489
EM E+ +
Sbjct: 631 EMTESGI 637
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 125/248 (50%), Gaps = 3/248 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLG--CEPDCYSYSVLMAVFCEERRMREAE 302
P+V ++N L+ +G + +D+ MA G C PD +Y+ ++ F +E + +A
Sbjct: 182 PDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKAC 241
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++EM + + D+V Y++++ C+ M +AE F R+M GV + T+ +L+ GY
Sbjct: 242 DLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGY 301
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
G A+ V+ +M R+ P+ + L+G LC ++ EA D+ +K G P
Sbjct: 302 SSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMK-GQNPD 360
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
SY ++ G +G + + + M+G G P + ++ I Y G ++ A ++
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFN 420
Query: 483 EMFENQVR 490
EM ++ V+
Sbjct: 421 EMRDHGVK 428
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 130/283 (45%), Gaps = 36/283 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRM------ 298
P+V +N ++ GF++EG K D++ EM + G PD +YS ++ C+ R M
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAF 278
Query: 299 -----------------------------REAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
+EA ++++EMR +++ DVVA NT++G C+
Sbjct: 279 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
G++ A + F M + G ++ ++NGY G + +++ M G P T
Sbjct: 339 YGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICT 398
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
VLI + + +A+ I + G+ P +YM +I LC GKM++A++ +M
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFN-EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ +G P Y I G+ G++ A L E+ N +R +
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLD 500
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 203/469 (43%), Gaps = 52/469 (11%)
Query: 30 SSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIAL----GLKNNP 85
+ P S + A V+L S+++ +LS PT ++ L + P
Sbjct: 77 ARAPSSAACGSGPALAVALFNRAASRAQGPRVLS-------PTSYTYAILMDCCTRAHRP 129
Query: 86 HLALRFFS------------FTQH--KSLCKHSLSSYATIIHILSRARLIGPARDVI--R 129
LAL FF H K C+ + A I +L R +G DV
Sbjct: 130 ELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI-LLHRTPELGCVPDVFSYN 188
Query: 130 VALRSPENDPKLKLFEVLVKTYRECGS--APFV--FDLLIKCCLEVKNIEKIETCVDIVR 185
+ L+S N K + L++ E G+ +P V ++ +I + ++ K D+ +
Sbjct: 189 ILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNK---ACDLFK 245
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
++ RG+ + T ++++ + + + + R++ + K V P
Sbjct: 246 EMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQM----------VNKGV------LP 289
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+ T+N L+ G+ G +++ V+ EM R PD + + LM C+ +++EA ++
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M K DV +Y ++ G+ G + + F M G+ TF L+ Y
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANC 409
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G +D A++++N+M G +P T +I LC ++ +A++ +++ G+ P + +
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFN-QMIDQGVVPDKYA 468
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
Y LI+G C G + +A ++ +E++ G + + + I+ K G V
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 1/248 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+P+V T+ ++ R G + + + +M G PD Y+Y L+ FC + +A+
Sbjct: 427 VKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAK 486
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L E+ + + D+V + +II C++G + A+ F G+ +V + L++GY
Sbjct: 487 ELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGY 546
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G ++ A+ V++ M G EP L+ C R+ E L + + + K G+ P+
Sbjct: 547 CLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQK-GIKPS 605
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y +I GL E G+ A EM G + YS + G K + A L K
Sbjct: 606 TILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFK 665
Query: 483 EMFENQVR 490
E+ V+
Sbjct: 666 ELRAMNVK 673
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 1/239 (0%)
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D+ V + P+ +N LM G+ G EK V+ M G EP+ Y L+ +C+
Sbjct: 525 DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKI 584
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
R+ E L+ EM K ++ + YN II G E G A+ F EM SG+ + T+
Sbjct: 585 GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTY 644
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
++ G + D AI ++ ++ + + T+ +I + RRV EA D+ A +
Sbjct: 645 SIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF-ASIS 703
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ GL P +Y +I L +EG +EEA + + M G EP + + + +K+ +
Sbjct: 704 RSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 762
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+ + ++ L+ GF G+ K +++ E+ G D + ++ C+ R+ +A+
Sbjct: 462 VVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQ 521
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++ + + D V YN ++ G+C +G+M +A F M +G+E + V + LVNGY
Sbjct: 522 NIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 581
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE-------------ALDI 409
C+ G +D + ++ +M +KG +P ++I L + R A++
Sbjct: 582 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 641
Query: 410 LKARVVKFGLFPT----EKSYMF-----------------LIKGLCEEGKMEEALKVQAE 448
+V GLF E ++F +I G+ + ++EEA + A
Sbjct: 642 CTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 701
Query: 449 MVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+ G P YS I +KEG VE A
Sbjct: 702 ISRSGLVPCAVTYSIMITNLIKEGLVEEA 730
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
R G + +S T+ L++ RA + A+ + + R G + L+ C+
Sbjct: 102 RAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEA 161
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA---LKVQAEMVGKGFEPS 457
+R EALDIL R + G P SY L+K LC +GK +A L++ AE G P
Sbjct: 162 KRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG-GTVCSPD 220
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ Y+ IDG+ KEG+V A L KEM + +
Sbjct: 221 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI 252
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 74/168 (44%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T++ ++ G ++ F++ ++ E+ + + D + + ++A + RR+ EA+ L+
Sbjct: 640 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ + V Y+ +I + G + AE+ F M +G E S H+V +
Sbjct: 700 ASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKK 759
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413
++ A + + + F E T +L+ K E + L A+
Sbjct: 760 NEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPAK 807
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 122/238 (51%), Gaps = 1/238 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RP+V T+N+L+ + G + + +M R+G PD ++S L+ V+ +E ++ EA+
Sbjct: 215 IRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAK 274
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K + EM ++V ++V YN++I G C G + A++ + G ++VT+ L+NGY
Sbjct: 275 KQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGY 334
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A VD + + M R G + + T L C + F A + + R+V G+ P
Sbjct: 335 CKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGK-FSAAEKVLGRMVSCGVHPD 393
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
++ L+ GLC+ GK+ +AL ++ + Y+ I G K VE A L
Sbjct: 394 MYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYL 451
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 1/227 (0%)
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
F ++ +MA P +S L+ + + L+ + + HD+ ++ T
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I FC ++ A +M G E S VTF LVNG+C A+ + + + G
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
+EP +I LC+K +V ALD+LK + K G+ P +Y LI L G +
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLK-HMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++ ++M+ G P + +SA ID Y KEG + A EM + V
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV 285
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 34/265 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ F+ L++ + +E V ++ + LG D YS++ L+ FC R+ A
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M E +V + +++ GFC + A ++ G E + V + +++ C
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE-------------LCDKRRV-------- 403
G V++A+ V M + G P+ T LI L D R+
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 404 FEAL--------DILKAR-----VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
F AL +L+A+ +++ + P +Y LI GLC G ++EA KV +V
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVE 475
KGF P+ Y+ I+GY K V+
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVD 341
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 6/198 (3%)
Query: 232 GIGKDVKRVVRVR------PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY 285
G+ + K+V+ V PN T+N L+ G+ + + + M+R G + D ++Y
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 286 SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGL 345
+ L +C+ + AEK+ M V D+ +N ++ G C+ G++ +A ++
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQK 422
Query: 346 SGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFE 405
S +T+ ++ G C+A V+ A ++ + KG P+ T ++ L KR E
Sbjct: 423 SKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWRE 482
Query: 406 ALDILKARVVKFGLFPTE 423
A ++ + + GL P +
Sbjct: 483 AHELYRKMQKEDGLMPIK 500
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 84/190 (44%), Gaps = 1/190 (0%)
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ +A L+ +M + + +V ++ ++ ++ + FR + + G+ +F
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L++ +CR + A+ M + GFEP T L+ C R +EA+ ++ ++V
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVD-QIVG 177
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G P Y +I LCE+G++ AL V M G P + Y++ I G +
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV 237
Query: 477 ATMLRKEMFE 486
+ + +M
Sbjct: 238 SARILSDMMR 247
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 119/233 (51%), Gaps = 4/233 (1%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N+ T+NA++ G + + + +M GC+PD +Y+ L+ C + +AE+L
Sbjct: 341 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELM 400
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M D V +NT+IG C+ G M A E F++M G +S+T+ +++G +A
Sbjct: 401 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 460
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGE-LCDKRRVFEALDILKARVVKFGLFPTEK 424
+D A+ ++N+M KGF P+ I L+ E L D + EA+ ++ ++ G+ P
Sbjct: 461 TKLDQALELFNEMGHKGFNPD--KIYQLLAECLNDDDTIEEAIQTVR-KLQDSGISPHTV 517
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
Y ++ GLC GK E A+ + A MV G P Y I+G EG + A
Sbjct: 518 LYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEA 570
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 10/268 (3%)
Query: 226 DSDATAGIGKDVKRVV---RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
D AG D +RVV V+PN +T+N L+ G V +M GC PD
Sbjct: 143 DGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDV 202
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+Y++L+ C+ R R+A +L + MR + + V YN ++ G C G++ A E R
Sbjct: 203 VTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRN 262
Query: 343 MGLSGVESSSVTFEHLVNGYCRA---GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+ G + S+V + ++ G C A GD D + +M R+ P +T V+I LC
Sbjct: 263 LPSHGCKPSTVNYNTVLKGLCSAERWGDADELV---TEMLRENCPPNEATFNVVIYSLCR 319
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
K + +A+ +L+ ++ K G +Y +I GLCE+ ++ A+ + ++M G +P +
Sbjct: 320 KGLLQQAIQLLE-KMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIV 378
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFEN 487
Y+ + G A L M +N
Sbjct: 379 TYNTLLKGLCSAAQWVDAEELMDNMTQN 406
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 2/249 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TFN ++ R+G ++ + +M++ GC + +Y+ ++ CE+R + A L
Sbjct: 305 PNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL 364
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M+ + D+V YNT++ G C + AEE M +G +VTF L+ C+
Sbjct: 365 LSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQ 424
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + AI V+ M KG P T +I L ++ +AL++ K F +K
Sbjct: 425 KGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG--FNPDK 482
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y L + L ++ +EEA++ ++ G P +Y+A + G + G E A + M
Sbjct: 483 IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYM 542
Query: 485 FENQVRQED 493
+ +D
Sbjct: 543 VSSGCMPDD 551
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 150/333 (45%), Gaps = 21/333 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY-----------REVFG 224
++ + ++ ++ RG + V T N L+ +G+G E+ +
Sbjct: 182 QVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYN 241
Query: 225 LDSDATAGIGK--DVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
+ D G G D ++R +P+ +N ++ G + +++ EM R
Sbjct: 242 VLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRE 301
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
C P+ +++V++ C + +++A +L E+M ++V YN II G CE + A
Sbjct: 302 NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGA 361
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
+M G + VT+ L+ G C A A + ++M + G P+ T LIG
Sbjct: 362 MGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGF 421
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
LC K + +A+++ K K G P +Y +I GL + K+++AL++ EM KGF P
Sbjct: 422 LCQKGLMVDAIEVFKQMPDK-GCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNP 480
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+IY + + +E A +++ ++ +
Sbjct: 481 D-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGI 512
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 137/345 (39%), Gaps = 73/345 (21%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN-DPKLKLFEVLVKTYRECGSAPF 159
CK S +Y T++ L A G A +++ LR EN P F V++ Y C
Sbjct: 268 CKPSTVNYNTVLKGLCSAERWGDADELVTEMLR--ENCPPNEATFNVVI--YSLCRKG-- 321
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY 219
++ + ++ + G + + T NA+I + + V
Sbjct: 322 ----------------LLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNV------- 358
Query: 220 REVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
D G+ +K +P++ T+N L+ G + E++ M + GC
Sbjct: 359 --------DGAMGLLSKMKSY-GCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCL 409
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
PD +++ L+ C++ M +A +++++M DK + + Y+TII G + ++ +A E
Sbjct: 410 PDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALEL 469
Query: 340 FREMGL----------------------------------SGVESSSVTFEHLVNGYCRA 365
F EMG SG+ +V + ++ G CR
Sbjct: 470 FNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRN 529
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
G + AI + M G P+ T +LI L + + EA ++L
Sbjct: 530 GKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 574
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
Query: 316 DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
D N ++ C G R ++ R +G G ++ V + L +GYCRAG + A V
Sbjct: 102 DAALANRLVRDLCRRG---RPDDAERVVGACGPAATVVAYGALTDGYCRAGRLGDARRVV 158
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
M +P T LI LC++ +V +AL +L + + G P +Y L++ C+
Sbjct: 159 GGM---PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCR-GCAPDVVTYNILLEATCK 214
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+A+++ M +G P+ Y+ +DG EG+V+ A L + +
Sbjct: 215 GRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNL 263
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T++ ++ G + ++ +++ EM G PD Y +L ++ + EA +
Sbjct: 445 PNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQT 503
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++D + V YN I+ G C G+ A + M SG +T+ L+ G
Sbjct: 504 VRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAY 563
Query: 365 AGDVDSAILVYNDMCRK 381
G ++ A + +C +
Sbjct: 564 EGYLNEARELLIKLCSR 580
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ +NA+++G R G E D+ M GC PD +Y +L+ E + EA
Sbjct: 512 ISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEAR 571
Query: 303 KLWEEMRDKNV 313
+L ++ ++V
Sbjct: 572 ELLIKLCSRDV 582
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 121/250 (48%), Gaps = 2/250 (0%)
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
K++KR ++PN+ T+ L+VG G +K + + EMA G P ++ ++
Sbjct: 631 KEMKRN-SIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSG 689
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
RR ++ E M + D+ YNT++ C G A EM G+ ++T
Sbjct: 690 SRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTIT 749
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
F L+ G+C++ +D+A +Y M +G P +T L+G L R+ EA D + + +
Sbjct: 750 FNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEA-DTVLSDM 808
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
K GL P +Y L+ G ++ EAL++ EMV KGF P Y++ + + K G +
Sbjct: 809 KKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMM 868
Query: 475 EMATMLRKEM 484
A L EM
Sbjct: 869 NQAKELFSEM 878
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 149/311 (47%), Gaps = 21/311 (6%)
Query: 178 ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
+ +++V + + G+ V T ALI E +GKG+ + +Y
Sbjct: 239 DAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLY------------------ 280
Query: 238 KRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ +VR V P+V T +AL+ G R+G F + ++ EM ++G P+ +Y L+ +
Sbjct: 281 EGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKA 340
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
RR E+ L EM + V D+V Y ++ + G++ A++ R + + VT+
Sbjct: 341 RRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTY 400
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
LV+ +CRAG++D A V M K P T +I L + + +A D ++ ++
Sbjct: 401 TVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMR-KMK 459
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G+ P +Y LI G + E AL V +M+ +G E + + + ++G K GN+E
Sbjct: 460 DSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIE 519
Query: 476 MATMLRKEMFE 486
A L K+M E
Sbjct: 520 GAEALFKDMDE 530
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 171/417 (41%), Gaps = 40/417 (9%)
Query: 105 LSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLL 164
L Y ++ L + I A+DV+R A +S P + VLV + G+ +L
Sbjct: 362 LVMYTALMDRLGKEGKIEEAKDVLRHA-QSDNITPNFVTYTVLVDAHCRAGNIDGAEQVL 420
Query: 165 IKCCLEVKN-IEKIETCVDIVRMLMSRG----------------LSVKVSTCNALIWEVS 207
++ +E K+ I + T I+ L+ RG ++ V T LI
Sbjct: 421 LQ--MEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFF 478
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVH------------------- 248
+ +G + ++YR++ +A + + +R N+
Sbjct: 479 KFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHV 538
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+ LM G ++ G V E+ PD Y+V + C + EA+ +EM
Sbjct: 539 NYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEM 598
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
R+ +E D YNT+I C G+ ++A + +EM + ++ + +T+ LV G AG V
Sbjct: 599 RNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVV 658
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A + N+M GF P T + ++ RR L+I ++ GL Y
Sbjct: 659 KKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEI-HELMMGAGLHADITVYNT 717
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
L+ LC G A V EM+ +G P ++A I G+ K +++ A + +M
Sbjct: 718 LVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQML 774
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 122/277 (44%), Gaps = 38/277 (13%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ ALM +EG E+ +DV P+ +Y+VL+ C + AE++ +M
Sbjct: 365 YTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQME 424
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+K+V +VV +++II G + G + +A ++ R+M SG+ + VT+ L++G+ + +
Sbjct: 425 EKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQE 484
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGEL---------------CDKRRVFEALDILKARV 414
+A+ VY DM +G E ++ L+ L D+R + LD +
Sbjct: 485 AALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLL--LDHVNYTT 542
Query: 415 VKFGLFPT--------------EKS-------YMFLIKGLCEEGKMEEALKVQAEMVGKG 453
+ GLF T EK+ Y I LC GK EA EM G
Sbjct: 543 LMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTG 602
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
EP Y+ I +EG A L KEM N ++
Sbjct: 603 LEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIK 639
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 119/244 (48%), Gaps = 1/244 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+V +N+L+ GF+ G + +V M G EP+ +Y+ L+ +C+ + M EA L+
Sbjct: 221 DVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLY 280
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E M V DVV + ++ G C G+ + A FREM GV + VT+ L++ +A
Sbjct: 281 EGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKA 340
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
++ + +M +G + L+ L + ++ EA D+L+ + P +
Sbjct: 341 RRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLR-HAQSDNITPNFVT 399
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y L+ C G ++ A +V +M K P++ +S+ I+G +K G + A ++M
Sbjct: 400 YTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMK 459
Query: 486 ENQV 489
++ +
Sbjct: 460 DSGI 463
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRVR 244
+++RG++ T NALI + + + + IY ++ GL
Sbjct: 738 MLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLS------------------ 779
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN+ TFN L+ G G + + V +M ++G EP+ +Y +L+ + ++ EA +L
Sbjct: 780 PNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRL 839
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM K YN+++ F + G M +A+E F EM GV +S T++ L+NG+ +
Sbjct: 840 YCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSK 899
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTI 390
+ ++ DM GF+P TI
Sbjct: 900 LRNGIEVRILLKDMKELGFKPSKGTI 925
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 87/216 (40%), Gaps = 9/216 (4%)
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKN----VEHDVVAYNTIIGGFCEIGEMARA 336
D + + ++ +C R +R A L V D V+YN + E G A
Sbjct: 75 DTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLA 134
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI---EVL 393
EM GV VT + G CR G V A + +M +G +G + L
Sbjct: 135 PPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA-EMLVRGRGIDGLDVVGWNAL 193
Query: 394 IGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
I C + + AL +++ R+ G+ Y L+ G G + AL+V M G
Sbjct: 194 IDGYCKVQDMAAALAVVE-RMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADG 252
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EP++ Y+A I Y K ++ A L + M + V
Sbjct: 253 VEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGV 288
>gi|357153642|ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Brachypodium distachyon]
Length = 620
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 151/338 (44%), Gaps = 52/338 (15%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++SRG+ + T N L+ + +E++ ++ V R R+ PN
Sbjct: 151 MLSRGMVPSLVTYNTLVNACRHEGDMTKAWEVWNQM--------------VAR--RIDPN 194
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
V T++ ++ EG + E +++ M G +P+ Y+Y+ LM+ C+ + L++
Sbjct: 195 VVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQ 254
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
E+ + + V T+IGGF ++ + F EM G+ + + L++G R+G
Sbjct: 255 ELLKSGLVPNAVIITTLIGGFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSG 314
Query: 367 DVDSAILVYNDMCRKGFEPE-------------GSTIEV--------------------- 392
A+ VY DM R G P+ G ++V
Sbjct: 315 YAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYN 374
Query: 393 -LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
LI E C + EAL R+ + G+ P +Y LI G ++ KME A+ + EMV
Sbjct: 375 ALIDEHCKDGNLAEALATC-TRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVA 433
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
KG EP++ Y+A I G+ K G+++ A L KEM E +
Sbjct: 434 KGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGI 471
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 112/234 (47%), Gaps = 1/234 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P + NA++ G + F++V ++ EM G P +Y+ L+ E M +A ++
Sbjct: 123 PALPACNAILDGLVKARRFDRVWKLFDEMLSRGMVPSLVTYNTLVNACRHEGDMTKAWEV 182
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W +M + ++ +VV Y+T+I CE G + AE F M +GV+ + T+ L++ +C+
Sbjct: 183 WNQMVARRIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSSHCK 242
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
V+ + +Y ++ + G P I LIG R+ + + + ++G+ PT
Sbjct: 243 RDGVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLANRISDVKNAF-LEMHRYGIAPTVP 301
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
Y LI G G +EAL V +M G P S + G G V++AT
Sbjct: 302 VYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQVAT 355
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 132/314 (42%), Gaps = 55/314 (17%)
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDA---TAGIG------ 234
M+ G+ + T NAL+ + GV +Y+E+ GL +A T IG
Sbjct: 220 MMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLAN 279
Query: 235 --KDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
DVK + P V +N+L+ G +R G ++ V+ +M R+G PD ++ S
Sbjct: 280 RISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCS 339
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
+++ C +++ A + E M+ + + AYN +I C+ G +A A M
Sbjct: 340 IIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEV 399
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+E + VT+ L++G+ + ++ A+ +Y +M KG EP T
Sbjct: 400 GIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLT----------------- 442
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
Y +I G + G ++ A ++ EM KG + S +D
Sbjct: 443 -------------------YTAMIHGHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVD 483
Query: 467 GYMKEGNVEMATML 480
G +E V+ A M
Sbjct: 484 GLCRESRVQDAVMF 497
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 102/235 (43%), Gaps = 4/235 (1%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
L++ + G + V+ + L P C + ++ + RR KL++EM
Sbjct: 96 LGVLVIALSQMGLHDDALSVFCRLPTLPALPAC---NAILDGLVKARRFDRVWKLFDEML 152
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ + +V YNT++ G+M +A E + +M ++ + VT+ ++ C G V
Sbjct: 153 SRGMVPSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVI 212
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A ++ M G +P T L+ C + V L + + ++K GL P L
Sbjct: 213 EAERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQ-ELLKSGLVPNAVIITTL 271
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
I G ++ + EM G P++ +Y++ IDG + G + A + ++M
Sbjct: 272 IGGFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDM 326
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 18/161 (11%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PNV T+ A++ G + G + + EMA G + + SVL+ C E R+++A
Sbjct: 436 VEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCRESRVQDAV 495
Query: 303 KLWEEMRDKNVEHDV------------------VAYNTIIGGFCEIGEMARAEEFFREMG 344
+ + D+ V Y T+I G G+ A +FF M
Sbjct: 496 MFIMKYAGQKKPGDINSFCSNYTTEEDCSILNSVTYMTLIYGLYIDGQYHEAGKFFSCMR 555
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
S + S T+ L+ G C G V +A+++Y DM + G +P
Sbjct: 556 ESDMVPDSFTYSLLIRGQCMLGYVLNAMMLYADMVKIGVKP 596
>gi|297599210|ref|NP_001046823.2| Os02g0468500 [Oryza sativa Japonica Group]
gi|47497324|dbj|BAD19365.1| fertility restorer homologue A-like [Oryza sativa Japonica Group]
gi|125582052|gb|EAZ22983.1| hypothetical protein OsJ_06677 [Oryza sativa Japonica Group]
gi|255670892|dbj|BAF08737.2| Os02g0468500 [Oryza sativa Japonica Group]
Length = 506
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 135/274 (49%), Gaps = 38/274 (13%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC---EPDCYSYSVLMAVFCEERRMRE 300
+PN +N L+ + ++G V+ EM ++ C P +YS L+ C +M+E
Sbjct: 189 QPNTCIYNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKE 248
Query: 301 AEKLWEEMRDKN-VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
A +L+E+M +K+ + D + YN +IGGFC +G++ +A+ F M + E ++ + L+
Sbjct: 249 AFELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLI 308
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL--------K 411
NG+C+ G+V++A V+ +M R G +P+ + L+G LC V E ++++ K
Sbjct: 309 NGHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCK 368
Query: 412 ARVVKFGLF--------------------PTE------KSYMFLIKGLCEEGKMEEALKV 445
A VV + L P+E SY ++ LC G+ME+A +
Sbjct: 369 ADVVTYNLLLEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGL 428
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
M+G+GF P + + G G V AT+
Sbjct: 429 LGMMLGRGFVPHYAASNMLLIGLCDVGRVSDATV 462
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 159/347 (45%), Gaps = 43/347 (12%)
Query: 132 LRSPEN----DPKLKLFEVLVKTY---RECGSAPFVFDLLIKCCLEVKNIEKIETCVDIV 184
LR P + P ++ +L+K Y + G+A VFD E++ + C D+
Sbjct: 179 LRDPRSKYLPQPNTCIYNILIKHYVKKGDLGTAFQVFD-------EMRKM----NCADVR 227
Query: 185 RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVR 244
L+ T + LI + RG + +E++ ++ I KD R+
Sbjct: 228 PSLV---------TYSTLIGGLCRGAQMKEAFELFEDM----------IEKD-----RIV 263
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+N L+ GF R G EK + ++ M + CEP+ ++Y+ L+ C++ + A +
Sbjct: 264 PDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEVEAARGV 323
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+EEM V+ D V+Y +++G C G + +EM G ++ VT+ L+ G C+
Sbjct: 324 FEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCK 383
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ A+ + + +G + ++ +++ LC + +A +L ++ G P
Sbjct: 384 DRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLL-GMMLGRGFVPHYA 442
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+ L+ GLC+ G++ +A +V GF P ++ I+ +E
Sbjct: 443 ASNMLLIGLCDVGRVSDATVTLYGLVDTGFMPEARCWARLIESVFRE 489
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 303 KLWEEMRDKNVEH----DVVAYNTIIGGFCEIGEMARAEEFF---REMGLSGVESSSVTF 355
+L ++RD ++ + YN +I + + G++ A + F R+M + V S VT+
Sbjct: 174 ELLADLRDPRSKYLPQPNTCIYNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTY 233
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKG-FEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
L+ G CR + A ++ DM K P+ T +LIG C +V +A I
Sbjct: 234 STLIGGLCRGAQMKEAFELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSI----- 288
Query: 415 VKFGLF------PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
FG P +Y LI G C++G++E A V EM+ G +P Y++ +
Sbjct: 289 --FGFMRKNECEPNAFNYATLINGHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCL 346
Query: 469 MKEGNVEMATMLRKEMFENQVRQE 492
+ GNV+ L +EM++ + +
Sbjct: 347 CRHGNVDEGINLVQEMWQKGCKAD 370
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 171/379 (45%), Gaps = 38/379 (10%)
Query: 102 KHSLSSYATIIHILSRARLIGPARDVIR--VALRSPENDPKLKLFEVLVKTYRECGSAPF 159
++S++S++ IIH + A + +IR V EN +L +L+ + +
Sbjct: 82 ENSINSFSIIIHTYALAGMSWEVFILIRDIVTFYKEENRDAGELVSLLLDVEK----SNV 137
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI---WEVSRGKGVISGY 216
VFD+LIK +E VR G+ + + +CN L+ E +R GV +
Sbjct: 138 VFDMLIKVFASNSMLEHANYV--FVRA-KDDGIELNIMSCNFLLKCLVEDNRVDGVRLLF 194
Query: 217 EIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA-----FEKVEDVWV 271
E+ + FG RPN+HT+ +M+ F+ G + ++
Sbjct: 195 EVLIK-FG------------------PRPNIHTY-TIMMNFFCRGVGCSVDIRRASEILG 234
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
++ G P+ +Y + C+ A +L + + KN + +N +I G C+ G
Sbjct: 235 KIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGG 294
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A E F+EM SG+ ++ L++G+CR G VD A V+ +M G P +
Sbjct: 295 ILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYS 354
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
+LI C + RV +AL++ + + G+ P SY LI G C +G M+ A+K EM
Sbjct: 355 ILIDGFCKEGRVDKALEVFE-EMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTS 413
Query: 452 KGFEPSLEIYSAFIDGYMK 470
F PS Y + I GY K
Sbjct: 414 NNFSPSAFNYCSLIKGYYK 432
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 130/274 (47%), Gaps = 36/274 (13%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N H FNA++ G + G ++ +V+ EM G PD YSYS+L+ FC + R+ +A +++
Sbjct: 279 NNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVF 338
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+EMR+ + ++ +Y+ +I GFC+ G + +A E F EM SG+ ++ L++G+CR
Sbjct: 339 KEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRK 398
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP---- 421
GD+DSAI + +M F P LI ++ AL + + K G++P
Sbjct: 399 GDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRI-MQKLGMWPDTIA 457
Query: 422 --------------------TEK-----------SYMFLIKGLCEEGKMEEALKVQAEMV 450
+EK SY I +C E+AL++ M+
Sbjct: 458 CNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVML 517
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ P + YS I + K N E A ML +M
Sbjct: 518 KRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKM 551
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V ++ L+ F + EK ++++M ++G + +Y++L+ +F + +M A
Sbjct: 521 VLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAY 580
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L++ M++ V D +AY +++ GFC GEM RA F EM G + VT+ +N Y
Sbjct: 581 RLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEY 640
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+ + A +Y M +G P+ +LI C+ + A + + P
Sbjct: 641 LKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPN 700
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
Y LI + K ++A K+ EM KG
Sbjct: 701 VVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 732
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 5/155 (3%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
RV P+ + +L+ GF G + ++ EM+R GC P+ +Y+ + + + + +A
Sbjct: 590 RVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQA 649
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG-VESSSVTFEHLVN 360
KL+E+M+++ V D + Y +I FC GEM RAE F EM G + V + L+N
Sbjct: 650 HKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLIN 709
Query: 361 GYCRAGDVDSAILVYNDMCRKGF----EPEGSTIE 391
Y + D A +Y +M KG EGS E
Sbjct: 710 SYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSE 744
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 2/243 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V N +++N + R EK + M + PD +YS L++ F + +A
Sbjct: 486 VHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAV 545
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ +M + +V Y +I F +M A F+ M S V + + LV G+
Sbjct: 546 MLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGF 605
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G++ A ++++M R+G P T I E + +A L ++ + G++P
Sbjct: 606 CNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHK-LYEKMKERGVYPD 664
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKG-FEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ Y LI C G+M A + EM +G P++ +Y+ I+ Y+K + A L
Sbjct: 665 QILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLY 724
Query: 482 KEM 484
+EM
Sbjct: 725 EEM 727
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 111/245 (45%), Gaps = 1/245 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + +L+ G+Y+ F + M +LG PD + + +++++C + +A L
Sbjct: 418 PSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALAL 477
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E+ ++ V + +YN I C +A + M V V + L++ + +
Sbjct: 478 SEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAK 537
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ + A++++ M + G T +LI ++ A + K + + ++P +
Sbjct: 538 RLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKG-MKESRVYPDQI 596
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L+ G C G+M A + EM +G P++ Y+ FI+ Y+K A L ++M
Sbjct: 597 AYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKM 656
Query: 485 FENQV 489
E V
Sbjct: 657 KERGV 661
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 44/226 (19%)
Query: 299 REAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHL 358
R+A +L + D VE V ++ +I F + A F G+E + ++ L
Sbjct: 120 RDAGELVSLLLD--VEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFL 177
Query: 359 VNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA-----R 413
+ VD L++ + + G P T +++ C R V ++DI +A +
Sbjct: 178 LKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFC--RGVGCSVDIRRASEILGK 235
Query: 414 VVKFGLFPTEKSYMFLIK-----------------------------------GLCEEGK 438
+ G P +Y IK GLC+ G
Sbjct: 236 IYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGI 295
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++EA +V EM G P + YS IDG+ ++G V+ A+ + KEM
Sbjct: 296 LDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEM 341
>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 124/256 (48%), Gaps = 13/256 (5%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
RPN TF L+ G EG + V+ M C P + VL++ C A K
Sbjct: 174 RPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALK 233
Query: 304 LWEEMRDKNVEH------DVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
L E M + N + VV+Y+ II C+ G + RA+EFF EM G+ + VT+
Sbjct: 234 LHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTS 293
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA---LDILKARV 414
L++G C A + + A ++ +M G P+ T VLIG LC +V EA D++ R
Sbjct: 294 LLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRY 353
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
V+ P+ ++Y LI+G C G ++E K+ MV K + YS + Y K+ V
Sbjct: 354 VE----PSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEV 409
Query: 475 EMATMLRKEMFENQVR 490
A +L +EM + ++
Sbjct: 410 HGAMILYREMMDRGIQ 425
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 144/324 (44%), Gaps = 40/324 (12%)
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
TC LI + R + +++ + +SD + +P V +++ ++
Sbjct: 214 TCGVLISGLCRTGNTCNALKLHEAMINGNSDFG----------INCKPTVVSYSCIIDSL 263
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
++G E+ ++ +VEM G P+ +Y+ L+ C EA++L+ EM D + DV
Sbjct: 264 CKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDV 323
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
V ++ +IG C++G++ A F M VE S+ T+ L+ GYC AG VD ++
Sbjct: 324 VTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLS 383
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSY----------- 426
M K + + + +L+ C V A+ IL ++ G+ PT +Y
Sbjct: 384 MVNKRCQHDAGSYSILMKAYCKDSEVHGAM-ILYREMMDRGIQPTVITYSKVGDARKLFG 442
Query: 427 ------MFL-----------IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
M L + GLC+ G + EAL V + F ++ I+++ I+G
Sbjct: 443 EIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMC 502
Query: 470 KEGNVEMATMLRKEMFENQVRQED 493
+ +E+A L + N+ Q D
Sbjct: 503 RSEKLEIAWELFNRLC-NEALQPD 525
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 123/277 (44%), Gaps = 39/277 (14%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV T+ +L+ G +E+ + +++EM G PD ++SVL+ C+ +++EA
Sbjct: 284 IFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEAS 343
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L++ M + VE YN +I G+C G + ++ F M + + ++ L+ Y
Sbjct: 344 GLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAY 403
Query: 363 CRAGDVDSAILVYNDMCRKGFEP----------------------------EGSTIEVLI 394
C+ +V A+++Y +M +G +P S V +
Sbjct: 404 CKDSEVHGAMILYREMMDRGIQPTVITYSKVGDARKLFGEIQFQDMVLDSISYSIYNVYL 463
Query: 395 GELCDKRRVFEALDILKARVVKFGL----FPTEKS-YMFLIKGLCEEGKMEEALKVQAEM 449
LC V EALD+ +GL F + + + LI G+C K+E A ++ +
Sbjct: 464 DGLCKNGCVSEALDVF------YGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRL 517
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ +P + Y+ I G K G + A L EM E
Sbjct: 518 CNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEE 554
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 111/255 (43%), Gaps = 7/255 (2%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
++ P + FN L ++ + V + M +G + S ++L+ C +R+ E
Sbjct: 101 MQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNILLNCLCSVKRVFE 160
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
++ + K + + ++ G C G++ A F+ MG+ S++T L++
Sbjct: 161 GFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLIS 220
Query: 361 GYCRAGDVDSAILVYNDMCRKGFE------PEGSTIEVLIGELCDKRRVFEALDILKARV 414
G CR G+ +A+ ++ M + P + +I LC V A + +
Sbjct: 221 GLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFF-VEM 279
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ G+FP +Y L+ GLC + EEA ++ EMV G P + +S I K G V
Sbjct: 280 KEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKV 339
Query: 475 EMATMLRKEMFENQV 489
+ A+ L M + V
Sbjct: 340 KEASGLFDLMVQRYV 354
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 75/161 (46%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N + G + G + DV+ + + ++ L+ C ++ A +L+ +
Sbjct: 459 YNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLC 518
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
++ ++ DVV Y +I G C++G+ +A + F EM G + VTF L+ G C +
Sbjct: 519 NEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERP 578
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ + + M + P+ ST+ +++ L E L++L
Sbjct: 579 KIVELLHKMAARKLSPDASTLLIVMDILLKDENYHECLNLL 619
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 5/221 (2%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
+M + P ++ L ++++ + M + + ++ N ++ C +
Sbjct: 97 QMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNILLNCLCSVK 156
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ F + G ++ TF +LV G C G + A+ V+ M P T
Sbjct: 157 RVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCG 216
Query: 392 VLIGELCDKRRVFEALDILKARV---VKFGLF--PTEKSYMFLIKGLCEEGKMEEALKVQ 446
VLI LC AL + +A + FG+ PT SY +I LC++G +E A +
Sbjct: 217 VLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFF 276
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
EM KG P++ Y++ + G E A L EM ++
Sbjct: 277 VEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDH 317
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 7/198 (3%)
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ EA + +M + +N + G + + M G+ + ++
Sbjct: 88 LHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNI 147
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L+N C V +V+ + RKG+ P T L+ LC + ++ EA+ + K V F
Sbjct: 148 LLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGV-F 206
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV------GKGFEPSLEIYSAFIDGYMKE 471
P+ + LI GLC G ALK+ M+ G +P++ YS ID K+
Sbjct: 207 DCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKD 266
Query: 472 GNVEMATMLRKEMFENQV 489
G VE A EM E +
Sbjct: 267 GLVERAKEFFVEMKEKGI 284
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARL---GCEPDCYSYSVLMAVFCEERRMREAE 302
NV FN+L+ G R EK+E W RL +PD +Y++++ C+ + ++A
Sbjct: 490 NVAIFNSLINGMCRS---EKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAY 546
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
L+ EM +K +VV +NT++ G C E + E +M
Sbjct: 547 DLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMA 588
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 38/74 (51%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+V T+ ++ G + G +K D+++EM GC P+ +++ LM C +
Sbjct: 522 LQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIV 581
Query: 303 KLWEEMRDKNVEHD 316
+L +M + + D
Sbjct: 582 ELLHKMAARKLSPD 595
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,354,531,216
Number of Sequences: 23463169
Number of extensions: 295620032
Number of successful extensions: 845837
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6791
Number of HSP's successfully gapped in prelim test: 4533
Number of HSP's that attempted gapping in prelim test: 708242
Number of HSP's gapped (non-prelim): 64223
length of query: 494
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 347
effective length of database: 8,910,109,524
effective search space: 3091808004828
effective search space used: 3091808004828
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)