BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011081
(494 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XIM8|PP155_ARATH Pentatricopeptide repeat-containing protein At2g15980
OS=Arabidopsis thaliana GN=At2g15980 PE=2 SV=1
Length = 498
Score = 503 bits (1294), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/502 (52%), Positives = 348/502 (69%), Gaps = 15/502 (2%)
Query: 1 MAVQILKHIIFSVSKPKPKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNH 60
M+ IL+ I+ KPKP L T+ S+PPS S LI+ VS+LTHHRSKSRW+
Sbjct: 1 MSTSILRRILDPTRKPKPDAILSISLLTTVSSPPSPPSDPLISDAVSILTHHRSKSRWST 60
Query: 61 LLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARL 120
L SL SG TP+QFS+I L L+NNPHL+LRFF FT+ SLC H S +T+IHILSR+RL
Sbjct: 61 LRSLQPSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRL 120
Query: 121 IGPARDVIRVALR----SPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEK 176
A ++IR+ALR + D LK+F L+K+Y CGSAPFVFDLLIK CL+ K +
Sbjct: 121 KSHASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSK---E 177
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
I+ V ++R L SRG++ ++STCNALI EVSR +G +GY++YREVFGLD + +
Sbjct: 178 IDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDD---VSVDEA 234
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAVFCEE 295
K + +++PN TFN++MV FYREG E VE +W EM +GC P+ YSY+VLM +C
Sbjct: 235 KKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCAR 294
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
M EAEK+WEEM+ + V +D+VAYNT+IGG C E+ +A+E FR+MGL G+E + +T+
Sbjct: 295 GLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTY 354
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR---RVFEALDILKA 412
EHLVNGYC+AGDVDS ++VY +M RKGFE +G TIE L+ LCD R RV EA DI+K
Sbjct: 355 EHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKD 414
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
V + +P+ Y L+K LCE+GKM+ AL +QAEMVGKGF+PS E Y AFIDGY G
Sbjct: 415 AVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVG 474
Query: 473 NVEMATMLRKEMFEN-QVRQED 493
+ E + +L EM E+ ++R E+
Sbjct: 475 DEETSALLAIEMAESLKLRAEE 496
>sp|Q9SZ10|PP338_ARATH Pentatricopeptide repeat-containing protein At4g26680,
mitochondrial OS=Arabidopsis thaliana GN=At4g26680 PE=2
SV=1
Length = 521
Score = 182 bits (462), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 208/440 (47%), Gaps = 23/440 (5%)
Query: 46 VSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSL 105
V++ H +S W+ L L L + + L ++ + L+L FF++ + ++ HSL
Sbjct: 57 VNVAHSHLIQSDWDKLNKLS-DHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSL 115
Query: 106 SSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLI 165
++A ++H L++ R A ++R L + D K+F+ L+ +YREC S P VFD L
Sbjct: 116 ETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLF 175
Query: 166 KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVIS-GYEIYREVFG 224
K +K K D + G V +CNA + + G+G + YRE+
Sbjct: 176 KTFAHLK---KFRNATDTFMQMKDYGFLPTVESCNAYMSSL-LGQGRVDIALRFYREM-- 229
Query: 225 LDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
R ++ PN +T N +M G+ R G +K ++ +M RLG S
Sbjct: 230 --------------RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVS 275
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+ L+A CE+ + A KL M ++ +VV +NT+I GFC ++ A + F EM
Sbjct: 276 YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
V ++VT+ L+NGY + GD + A Y DM G + + T LI LC + +
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+A +K + K L P ++ LI G C + ++ M+ G P+ + ++
Sbjct: 396 KAAQFVK-ELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454
Query: 465 IDGYMKEGNVEMATMLRKEM 484
+ + + + + A+ + +EM
Sbjct: 455 VSAFCRNEDFDGASQVLREM 474
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 1/215 (0%)
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C+ + L F ++ R A + +M+D V + N + G + A
Sbjct: 164 CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIAL 223
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
F+REM + + T +++GYCR+G +D I + DM R GF + LI
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C+K + AL LK + K GL P ++ LI G C K++EA KV EM P+
Sbjct: 284 CEKGLLSSALK-LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
Y+ I+GY ++G+ EMA ++M N ++++
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+ + + + M+ GL V T N LI R + +++ E+
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM-------------- 334
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
+ V V PN T+N L+ G+ ++G E + +M G + D +Y+ L+ C++
Sbjct: 335 --KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQA 392
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ R+A + +E+ +N+ + ++ +I G C R E ++ M SG + TF
Sbjct: 393 KTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFN 452
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
LV+ +CR D D A V +M R+ + T+
Sbjct: 453 MLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVH 487
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 97/246 (39%), Gaps = 37/246 (15%)
Query: 98 KSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSA 157
KS + ++ ++ T+IH RA + A V +++ P + L+ Y + G
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFG-EMKAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 158 PFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
F ++ G+ + T NALI+ + + +
Sbjct: 360 EMAFRF--------------------YEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ 399
Query: 218 IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
+E+ D + +V PN TF+AL++G ++ +++ M R G
Sbjct: 400 FVKEL-------------DKENLV---PNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C P+ ++++L++ FC A ++ EM +++ D + + G G+ +
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVK 503
Query: 338 EFFREM 343
+ +EM
Sbjct: 504 KLLQEM 509
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 226/464 (48%), Gaps = 37/464 (7%)
Query: 29 SSSTPPSDQSHNLIAT-VVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHL 87
S ST S S +L+A ++ L H + +HL + TP S + L +N+ L
Sbjct: 11 SLSTFASSPSDSLLADKALTFLKRH--PYQLHHL----SANFTPEAASNLLLKSQNDQAL 64
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR-VALRSPENDPKLKLFEV 146
L+F ++ +L +HIL++ +L A+ + VA ++ +++ +F+
Sbjct: 65 ILKFLNWANPHQF--FTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKS 122
Query: 147 LVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEV 206
L +TY C S VFDL++K + I+ + IV + + G V + NA++
Sbjct: 123 LQETYDLCYSTSSVFDLVVK---SYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDAT 179
Query: 207 SRGKGVISGYE-IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEK 265
R K IS E +++E+ L+S +V PNV T+N L+ GF G +
Sbjct: 180 IRSKRNISFAENVFKEM--LES--------------QVSPNVFTYNILIRGFCFAGNIDV 223
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
++ +M GC P+ +Y+ L+ +C+ R++ + KL M K +E ++++YN +I
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
G C G M EM G VT+ L+ GYC+ G+ A++++ +M R G P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 386 EGSTIEVLIGELC---DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
T LI +C + R E LD ++ R GL P E++Y L+ G ++G M EA
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVR----GLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+V EM GF PS+ Y+A I+G+ G +E A + ++M E
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Score = 148 bits (374), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 206/454 (45%), Gaps = 47/454 (10%)
Query: 76 QIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVA---- 131
+A ++ + +L F S + LC + S + ++ SR LI A ++ +A
Sbjct: 105 DVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHG 164
Query: 132 ---------------LRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNI 174
+RS N + E + K E +P F +++LI+ NI
Sbjct: 165 FMPGVLSYNAVLDATIRSKRN---ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNI 221
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATA- 231
+ T D + ++G V T N LI + + + G+++ R + GL+ + +
Sbjct: 222 DVALTLFDKME---TKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 232 -----GIGKD--VKRVVRVRPNVH---------TFNALMVGFYREGAFEKVEDVWVEMAR 275
G+ ++ +K V V ++ T+N L+ G+ +EG F + + EM R
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 276 LGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
G P +Y+ L+ C+ M A + ++MR + + + Y T++ GF + G M
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A REM +G S VT+ L+NG+C G ++ AI V DM KG P+ + ++
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
C V EAL + K +V+ G+ P +Y LI+G CE+ + +EA + EM+ G
Sbjct: 459 GFCRSYDVDEALRV-KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
P Y+A I+ Y EG++E A L EM E V
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 154/332 (46%), Gaps = 35/332 (10%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE--VFGL-----------DSDATAGI 233
++ GL+ V T +LI + + + E + V GL D + G
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 234 GKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
+ RV+R P+V T+NAL+ G G E V +M G PD SYS
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
+++ FC + EA ++ EM +K ++ D + Y+++I GFCE A + + EM G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ T+ L+N YC GD++ A+ ++N+M KG P+ T VLI L + R EA
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 408 DILKARVVKFGLFPTE---------------KSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
+L + + P++ KS + LIKG C +G M EA +V M+GK
Sbjct: 576 RLLLKLFYEESV-PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK 634
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+P Y+ I G+ + G++ A L KEM
Sbjct: 635 NHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 178/448 (39%), Gaps = 93/448 (20%)
Query: 64 LCRSGLTPTQFSQIAL----GLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRAR 119
+ R GLTP+ + +L N + A+ F + + LC + +Y T++ S+
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE-RTYTTLVDGFSQKG 394
Query: 120 LIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIET 179
+ A V+R + P + + L+ + G K+E
Sbjct: 395 YMNEAYRVLR-EMNDNGFSPSVVTYNALINGHCVTG--------------------KMED 433
Query: 180 CVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKR 239
+ ++ + +GLS V + + ++ R V + RE+ + K +K
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM----------VEKGIK- 482
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
P+ T+++L+ GF + ++ D++ EM R+G PD ++Y+ L+ +C E +
Sbjct: 483 -----PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGG--------------------------------- 326
+A +L EM +K V DVV Y+ +I G
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 327 -----------------FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
FC G M A++ F M + + +++G+CRAGD+
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A +Y +M + GF T+ L+ L + +V E L+ + V++ + L
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE-LNSVIVHVLRSCELSEAEQAKVL 716
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPS 457
++ EG M+ L V AEM GF P+
Sbjct: 717 VEINHREGNMDVVLDVLAEMAKDGFLPN 744
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 209/464 (45%), Gaps = 58/464 (12%)
Query: 77 IALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPE 136
+ + +K + L L FF + + + +L S +IH+ ++ + A+ +I P+
Sbjct: 93 VLMKIKCDYRLVLDFFDWARSRR--DSNLESLCIVIHLAVASKDLKVAQSLISSFWERPK 150
Query: 137 ---NDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEV---------------------- 171
D ++ F++LV TY++ GS P VFD+ + ++
Sbjct: 151 LNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSV 210
Query: 172 -----------KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIY- 219
K+ K T + + R G+ V++ N +I V + + + +
Sbjct: 211 DSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 270
Query: 220 -REVFGLDSDATA-----------GIGKDVKRVVRV------RPNVHTFNALMVGFYREG 261
E+ G D + G V +++ V +PN + + +++ R
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
+ E+ + EM R G PD Y+ L+ FC+ +R A K + EM +++ DV+ Y
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
II GFC+IG+M A + F EM G+E SVTF L+NGYC+AG + A V+N M +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G P T LI LC + + A ++L + K GL P +Y ++ GLC+ G +EE
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLH-EMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
A+K+ E G Y+ +D Y K G ++ A + KEM
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 163/325 (50%), Gaps = 25/325 (7%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDAT-----------AGI 233
+ SR ++ V T A+I + ++ +++ E+F GL+ D+ AG
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 234 GKDVKRV------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
KD RV PNV T+ L+ G +EG + ++ EM ++G +P+ ++Y+
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
++ C+ + EA KL E + D V Y T++ +C+ GEM +A+E +EM G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
++ + VTF L+NG+C G ++ + N M KG P +T L+ + C + + A
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
I K + G+ P K+Y L+KG C+ M+EA + EM GKGF S+ YS I G
Sbjct: 617 AIYKDMCSR-GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 468 YMKEGNVEMATMLRKEMFENQVRQE 492
++K A +E+F+ Q+R+E
Sbjct: 676 FLKRKKFLEA----REVFD-QMRRE 695
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 93/229 (40%), Gaps = 51/229 (22%)
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
G V+ V + RL DCY + + VF R E W +V +Y
Sbjct: 205 GLVLSVDSCNVYLTRL--SKDCYKTATAIIVF---REFPEVGVCW----------NVASY 249
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
N +I C++G + A M L G +++ +VNGYCR G++D
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD----------- 298
Query: 381 KGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKME 440
+V++ ++++K + GL P Y +I LC K+
Sbjct: 299 ---------------------KVWKLIEVMKRK----GLKPNSYIYGSIIGLLCRICKLA 333
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EA + +EM+ +G P +Y+ IDG+ K G++ A+ EM +
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 214/442 (48%), Gaps = 28/442 (6%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI 128
L P ++ + LK +P LA +FF ++ ++ KHS+ SY + HIL AR+ A V+
Sbjct: 106 LAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVL 165
Query: 129 RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLM 188
+ + S + +F+VL T C VFD L +++ +E+ C ++
Sbjct: 166 KEMVLSKAD---CDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFR 222
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGL--------------------DSD 228
+ K +CN L+ ++ ++++ G D +
Sbjct: 223 ---VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVE 279
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
A G+ +++K V P+ T+N+++ GF + G + + EM + CEPD +Y+ L
Sbjct: 280 AARGLFEEMKFRGLV-PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ FC+ ++ + + EM+ ++ +VV+Y+T++ FC+ G M +A +F+ +M G+
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+ T+ L++ C+ G++ A + N+M + G E T LI LCD R+ EA +
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+ ++ G+ P SY LI G + M+ AL++ E+ G+G +P L +Y FI G
Sbjct: 459 LF-GKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 517
Query: 469 MKEGNVEMATMLRKEMFENQVR 490
+E A ++ EM E ++
Sbjct: 518 CSLEKIEAAKVVMNEMKECGIK 539
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 135/268 (50%), Gaps = 6/268 (2%)
Query: 225 LDSDATAGIGKDVKRV------VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+D++ G D R+ V V NV T+ AL+ G ++ E+++ +M G
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P+ SY+ L+ F + + M A +L E++ + ++ D++ Y T I G C + ++ A+
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
EM G++++S+ + L++ Y ++G+ + + ++M E T VLI LC
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ V +A+D FGL + +I GLC++ ++E A + +MV KG P
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 648
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFE 486
Y++ +DG K+GNV A LR +M E
Sbjct: 649 TAYTSLMDGNFKQGNVLEALALRDKMAE 676
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 141/307 (45%), Gaps = 18/307 (5%)
Query: 189 SRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVH 248
+ G+ +++ NALI + K + E+ E+ G ++P++
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG----------------IKPDLL 508
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
+ + G E + V EM G + + Y+ LM + + E L +EM
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS-GVESSSVTFEHLVNGYCRAGD 367
++ ++E VV + +I G C+ +++A ++F + G+++++ F +++G C+
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
V++A ++ M +KG P+ + L+ + V EAL L+ ++ + G+ +Y
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL-ALRDKMAEIGMKLDLLAYT 687
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
L+ GL ++++A EM+G+G P + + + + + G ++ A L+ + ++
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKH 747
Query: 488 QVRQEDG 494
Q+ D
Sbjct: 748 QLLTSDN 754
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 122/290 (42%), Gaps = 43/290 (14%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF----------------EVL 147
+L+SY +IH +A+ + A +++ L+ P L L+ +V+
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLN-ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 148 VKTYRECG--SAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWE 205
+ +ECG + ++ L+ + N + +D ++ L + V V T LI
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL---DIEVTVVTFCVLIDG 586
Query: 206 VSRGKGVISGYEIYREV---FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGA 262
+ + K V + + + FGL ++A F A++ G ++
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQANAA------------------IFTAMIDGLCKDNQ 628
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
E ++ +M + G PD +Y+ LM ++ + EA L ++M + ++ D++AY +
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 688
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
++ G ++ +A F EM G+ V ++ + G +D A+
Sbjct: 689 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAV 738
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 146/572 (25%), Positives = 245/572 (42%), Gaps = 107/572 (18%)
Query: 5 ILKHIIFSVSKPKPKPQL-----LSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWN 59
IL+H I +S P L+Q ST S P S L+ ++ S S+W
Sbjct: 9 ILRHRISILSGAGYSPAAARLSSLAQTSTPESVLPPITSEILLESIRS--------SQW- 59
Query: 60 HLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRAR 119
H++ LTP+ S L L P+LA F+F H L + + I ++S+
Sbjct: 60 HIVEHVADKLTPSLVSTTLLSLVKTPNLA---FNFVNHIDLYRLDFQTQCLAIAVISKLS 116
Query: 120 LIGPARDVIRVALRSPENDPKLKLFEVLVKTY-RECGSAPFVFDLLIKCCLEVKNIEKIE 178
P +++ + S +N + LF+ LV + R + +FDLL++CC +++ +++
Sbjct: 117 SPKPVTQLLKEVVTSRKNSIR-NLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAI 175
Query: 179 TCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATA------- 231
C +++ +G K TCN ++ +SR + + + Y +++ ++ +
Sbjct: 176 ECFYLMK---EKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232
Query: 232 ------GIGKDVK------RVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCE 279
G K K V ++P + T+N L+ GF G E + EM G +
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEM----------------------------RDK 311
PD +Y+ +++ C E R E + +E+ RD+
Sbjct: 293 PDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDE 352
Query: 312 NVEHDVV----AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
V+ +V YNT+I G ++ AE RE+ G+ SVT+ L+NGYC+ GD
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK----------- 416
A ++++M G +P T LI LC K + EA ++ + V K
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472
Query: 417 --------------FGLF---------PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG 453
F L P + +Y L++GLC EGK EEA ++ EM +G
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 532
Query: 454 FEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+P Y+ I GY K+G+ + A M+R EM
Sbjct: 533 IKPDHISYNTLISGYSKKGDTKHAFMVRDEML 564
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 36/236 (15%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
T+N L+ G+ + G +K + EM G +P ++Y+ L+ V C + + REA++L+E++
Sbjct: 399 TYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV 458
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
K ++ D+V NT++ G C IG M RA +EM + + VT+ L+ G C G
Sbjct: 459 VGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKF 518
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+ A L+GE+ KRR G+ P SY
Sbjct: 519 EEA-------------------RELMGEM--KRR---------------GIKPDHISYNT 542
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
LI G ++G + A V+ EM+ GF P+L Y+A + G K E+A L +EM
Sbjct: 543 LISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 158 bits (400), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 208/439 (47%), Gaps = 29/439 (6%)
Query: 55 KSRWNHLLSLCRSG-LTPTQFSQIALGLKNNPHLALRFFSFT--QHKSLCKHSLSSYATI 111
KS +N +L++ R G L + Q L L + LAL+F + Q H +
Sbjct: 21 KSIYN-ILTIDRWGSLNHMDYRQARLRLVHGK-LALKFLKWVVKQPGLETDHIVQLVCIT 78
Query: 112 IHILSRARLIGPARDVIR-VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLE 170
HIL RAR+ PAR +++ ++L S ++ +F L+ TYR C S P V+D+LI+ L
Sbjct: 79 THILVRARMYDPARHILKELSLMSGKSSF---VFGALMTTYRLCNSNPSVYDILIRVYLR 135
Query: 171 VKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDAT 230
I+ ++I R++ G + V TCNA++ V + +S + +E+
Sbjct: 136 EG---MIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM-------- 184
Query: 231 AGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMA 290
+KR ++ P+V TFN L+ EG+FEK + +M + G P +Y+ ++
Sbjct: 185 ------LKR--KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
+C++ R + A +L + M+ K V+ DV YN +I C +A+ R+M +
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ VT+ L+NG+ G V A + N+M G P T LI + EAL +
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
K GL P+E SY L+ GLC+ + + A M G Y+ IDG K
Sbjct: 357 YMMEAK-GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415
Query: 471 EGNVEMATMLRKEMFENQV 489
G ++ A +L EM ++ +
Sbjct: 416 NGFLDEAVVLLNEMSKDGI 434
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 138/302 (45%), Gaps = 17/302 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+ + ++++ + S+G+ V T N LI ++ R + GY + R++
Sbjct: 243 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM------------- 289
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
R + PN T+N L+ GF EG + EM G P+ +++ L+ E
Sbjct: 290 ---RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 346
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+EA K++ M K + V+Y ++ G C+ E A F+ M +GV +T+
Sbjct: 347 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 406
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++G C+ G +D A+++ N+M + G +P+ T LI C R A +I+ R+
Sbjct: 407 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV-CRIY 465
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+ GL P Y LI C G ++EA+++ M+ +G ++ + K G V
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 525
Query: 476 MA 477
A
Sbjct: 526 EA 527
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 124/241 (51%), Gaps = 1/241 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P++ T++AL+ GF + G F+ +++ + R+G P+ YS L+ C ++EA
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++E M + D +N ++ C+ G++A AEEF R M G+ ++V+F+ L+NGY
Sbjct: 494 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 553
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
+G+ A V+++M + G P T L+ LC + EA LK+ T
Sbjct: 554 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 613
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
Y L+ +C+ G + +A+ + EMV + P Y++ I G ++G +A + K
Sbjct: 614 VM-YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 672
Query: 483 E 483
E
Sbjct: 673 E 673
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 10/252 (3%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PN +F+ L+ G+ G K V+ EM ++G P ++Y L+ C+ +REAE
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K + + D V YNT++ C+ G +A+A F EM + S T+ L++G
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD-----ILKARVVKF 417
CR G AIL K E G+ + + C +F+A + ++
Sbjct: 659 CRKGKTVIAILF-----AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 713
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
G P + +I G GK+E+ + EM + P+L Y+ + GY K +V +
Sbjct: 714 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773
Query: 478 TMLRKEMFENQV 489
+L + + N +
Sbjct: 774 FLLYRSIILNGI 785
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 104/236 (44%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
TFN L+ + G + E+ M G P+ S+ L+ + +A +++EM
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
Y +++ G C+ G + AE+F + + +V + L+ C++G++
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 629
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
A+ ++ +M ++ P+ T LI LC K + A+ K + + P + Y
Sbjct: 630 AKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTC 689
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ G+ + G+ + + + +M G P + +A IDGY + G +E L EM
Sbjct: 690 FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T NA++ G+ R G EK D+ EM P+ +Y++L+ + + + + + L
Sbjct: 717 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ + + D + ++++ G CE + + + GVE TF L++ C
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 836
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+++ A + M G + T + ++ L R E+ +L + K G+ P +
Sbjct: 837 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLH-EMSKQGISPESR 895
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y+ LI GLC G ++ A V+ EM+ P SA + K G + AT+L + M
Sbjct: 896 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM 955
Query: 485 FE 486
+
Sbjct: 956 LK 957
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 134/330 (40%), Gaps = 21/330 (6%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE-------------- 221
KIE D++ + ++ ++T N L+ S+ K V + + +YR
Sbjct: 734 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793
Query: 222 --VFGLDSDATAGIGKDVKRVVRVRP---NVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
V G+ IG + + R + +TFN L+ G D+ M L
Sbjct: 794 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
G D + +++V R +E+ + EM + + + Y +I G C +G++ A
Sbjct: 854 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
EM + +V +V + G D A L+ M + P ++ L+
Sbjct: 914 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 973
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
C V EAL+ L+ + GL SY LI GLC +G M A ++ EM G GF
Sbjct: 974 CCKNGNVIEALE-LRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1032
Query: 457 SLEIYSAFIDGYM-KEGNVEMATMLRKEMF 485
+ Y A I G + +E A ++ K++
Sbjct: 1033 NATTYKALIRGLLARETAFSGADIILKDLL 1062
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 115/248 (46%), Gaps = 1/248 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
V PN + + G ++ G ++ +M LG PD + + ++ + ++ +
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
L EM ++N ++ YN ++ G+ + +++ + +R + L+G+ +T LV G
Sbjct: 739 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C + ++ + + +G E + T +LI + C + A D++K + G+
Sbjct: 799 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV-MTSLGISL 857
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+ + ++ L + +E+ V EM +G P Y I+G + G+++ A +++
Sbjct: 858 DKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVK 917
Query: 482 KEMFENQV 489
+EM +++
Sbjct: 918 EEMIAHKI 925
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 116/247 (46%), Gaps = 27/247 (10%)
Query: 159 FVFDLLI-KCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
+ F++LI KCC +I D+V+++ S G+S+ TC+A++ ++R
Sbjct: 825 YTFNMLISKCCAN----GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 880
Query: 218 IYREVF--GLDSDATAGIG--------KDVKRVVRVR----------PNVHTFNALMVGF 257
+ E+ G+ ++ IG D+K V+ PNV +A++
Sbjct: 881 VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRAL 939
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G ++ + M ++ P S++ LM + C+ + EA +L M + ++ D+
Sbjct: 940 AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 999
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG-YCRAGDVDSAILVYN 376
V+YN +I G C G+MA A E + EM G +++ T++ L+ G R A ++
Sbjct: 1000 VSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059
Query: 377 DMCRKGF 383
D+ +GF
Sbjct: 1060 DLLARGF 1066
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 212/469 (45%), Gaps = 64/469 (13%)
Query: 59 NHLLSLCRSGLTPTQFSQIALGLKNNPHLALRFFS-FTQHKSLCKHSLSSYATIIHILSR 117
NHL+ L P ++ +N+ L RF H KH+ S + +IHIL R
Sbjct: 71 NHLIRL-----NPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVR 125
Query: 118 ARLIGPARD-VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEK 176
+ + A+ ++R+ RS + +L++ L T+ CGS VFDLLI+ ++ + + +
Sbjct: 126 SGRLSDAQSCLLRMIRRSGVS--RLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLRE 183
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
++R S+G +V + CNALI + R V + +Y+E+ + +G+G
Sbjct: 184 AHEAFTLLR---SKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI------SRSGVG-- 232
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
NV+T N ++ ++G EKV ++ G PD +Y+ L++ + +
Sbjct: 233 --------INVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
M EA +L M K V YNT+I G C+ G+ RA+E F EM SG+ S T+
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 357 HLVNGYCRAGDV-----------------------------------DSAILVYNDMCRK 381
L+ C+ GDV D A++ +N +
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
G P+ +LI C K + A++ L+ +++ G +Y ++ GLC+ + E
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMN-LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
A K+ EM + P + IDG+ K GN++ A L ++M E ++R
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 122/244 (50%), Gaps = 1/244 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ + L+ G+ R+G ++ EM + GC D +Y+ ++ C+ + + EA+KL
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ EM ++ + D +I G C++G + A E F++M + VT+ L++G+ +
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
GD+D+A ++ DM K P + +L+ LC K + EA + + K + PT
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK-NIKPTVM 586
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+IKG C G + +M+ +GF P Y+ I G+++E N+ A L K+M
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Query: 485 FENQ 488
E Q
Sbjct: 647 EEEQ 650
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 34/252 (13%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+R +V T+N L+ GF + G + +++W +M P SYS+L+ C + + EA
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
++W+EM KN++ V+ N++I G+C G + E F +M G +++ L+ G
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ R ++ A + +K E +G GL P
Sbjct: 630 FVREENMSKAF----GLVKKMEEEQG------------------------------GLVP 655
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y ++ G C + +M+EA V +M+ +G P Y+ I+G++ + N+ A +
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIH 715
Query: 482 KEMFENQVRQED 493
EM + +D
Sbjct: 716 DEMLQRGFSPDD 727
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 151/268 (56%), Gaps = 3/268 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
SDA+ + ++R ++ PNV TFNAL+ F +EG + E ++ EM + +PD ++YS
Sbjct: 312 SDASRLLSDMIER--KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L+ FC R+ EA+ ++E M K+ +VV YNT+I GFC+ + E FREM
Sbjct: 370 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+ ++VT+ L++G+ +A D D+A +V+ M G P T L+ LC ++ +A
Sbjct: 430 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ + + + + + PT +Y +I+G+C+ GK+E+ + + KG +P + IY+ I
Sbjct: 490 MVVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548
Query: 467 GYMKEGNVEMATMLRKEMFENQVRQEDG 494
G+ ++G E A L ++M E+ + G
Sbjct: 549 GFCRKGLKEEADALFRKMREDGPLPDSG 576
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 2/262 (0%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
D +G+ ++R+ + N++T+N L+ F R + +M +LG EP + S
Sbjct: 102 DLVISLGEKMQRL-GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 160
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ +C +R+ +A L ++M + D + + T+I G + + A M G
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ + VT+ +VNG C+ GD+D A + N M E +I LC R +AL
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++ K G+ P +Y LI LC + +A ++ ++M+ + P++ ++A ID
Sbjct: 281 NLFTEMENK-GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 468 YMKEGNVEMATMLRKEMFENQV 489
++KEG + A L EM + +
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSI 361
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 113/249 (45%), Gaps = 23/249 (9%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
KL++ ++K R F + LI C+ ++++ + +++S+ V T N
Sbjct: 351 KLYDEMIK--RSIDPDIFTYSSLINGFCMH----DRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
LI + K + G E++RE + G N T+ L+ GF++
Sbjct: 405 TLINGFCKAKRIDEGVELFRE---MSQRGLVG-------------NTVTYTTLIHGFFQA 448
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
+ + V+ +M G P+ +Y+ L+ C+ ++ +A ++E ++ +E + Y
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 508
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
N +I G C+ G++ + F + L GV+ + + +++G+CR G + A ++ M
Sbjct: 509 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Query: 381 KGFEPEGST 389
G P+ T
Sbjct: 569 DGPLPDSGT 577
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 62/143 (43%), Gaps = 1/143 (0%)
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
S S + ++ + +D AI ++ M + P L+ + K + F+ +
Sbjct: 48 SGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIA-KMKKFDLVIS 106
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
L ++ + G+ +Y LI C ++ AL + +M+ G+EPS+ S+ ++GY
Sbjct: 107 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 166
Query: 470 KEGNVEMATMLRKEMFENQVRQE 492
+ A L +M E R +
Sbjct: 167 HGKRISDAVALVDQMVEMGYRPD 189
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 169/322 (52%), Gaps = 17/322 (5%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
N + + +++ + ++G+ V T N+LI + +G SDA+
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN--------------YGRWSDASRL 312
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+ ++R ++ PNV TF+AL+ F +EG + E ++ EM + +PD ++YS L+ F
Sbjct: 313 LSDMIER--KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C R+ EA+ ++E M K+ +VV YNT+I GFC+ + E FREM G+ ++
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ L+ G +AGD D A ++ M G P+ T +L+ LC ++ +AL + +
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE- 489
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ K + P +Y +I+G+C+ GK+E+ + + KG +P++ IY+ I G+ ++G
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Query: 473 NVEMATMLRKEMFENQVRQEDG 494
E A L +EM E+ G
Sbjct: 550 LKEEADALFREMKEDGTLPNSG 571
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 125/249 (50%), Gaps = 1/249 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+R+ +++++N L+ F R V +M +LG EPD + S L+ +C +R+ E
Sbjct: 109 LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 168
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L ++M + + V +NT+I G + + A M G + T+ +VN
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 228
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C+ GD+D A+ + M + E + +I LC+ + V +AL++ K G+
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIR 287
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P +Y LI+ LC G+ +A ++ ++M+ + P++ +SA ID ++KEG + A L
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 481 RKEMFENQV 489
EM + +
Sbjct: 348 YDEMIKRSI 356
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 125/285 (43%), Gaps = 36/285 (12%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS--------------- 284
V+ +PN TFN L+ G + + + M GC+PD ++
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 285 --------------------YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
Y+ ++ C + + +A L+ EM +K + +VV YN++I
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
C G + A +M + + VTF L++ + + G + A +Y++M ++ +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444
P+ T LI C R+ EA + + + K FP +Y LIKG C+ ++EE ++
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 445 VQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ EM +G + Y+ I G + G+ +MA + K+M + V
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 125/264 (47%), Gaps = 21/264 (7%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
D +FE+++ ++C ++ LIK + K ++E +++ R + RGL
Sbjct: 377 DEAKHMFELMIS--KDCFPNVVTYNTLIKGFCKAK---RVEEGMELFREMSQRGLVGNTV 431
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T N LI + + +I++++ SD V P++ T++ L+ G
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMV---SDG-------------VPPDIITYSILLDGL 475
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G EK V+ + + EPD Y+Y++++ C+ ++ + L+ + K V+ +V
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
+ Y T+I GFC G A+ FREM G +S T+ L+ R GD ++ + +
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 595
Query: 378 MCRKGFEPEGSTIEVLIGELCDKR 401
M GF + STI ++I L D R
Sbjct: 596 MRSCGFVGDASTISMVINMLHDGR 619
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 1/223 (0%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
D++ EM + P ++ L++ + + L E M++ + +D+ +YN +I F
Sbjct: 66 DLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCF 125
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C ++ A +M G E VT L+NGYC + A+ + + M ++P
Sbjct: 126 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNT 185
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI L + EA+ ++ R+V G P +Y ++ GLC+ G ++ AL +
Sbjct: 186 VTFNTLIHGLFLHNKASEAVALID-RMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 244
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+M E + IY+ ID NV A L EM +R
Sbjct: 245 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
++ +A L+ EM +V +N ++ ++ + M + ++
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L+N +CR + A+ V M + G+EP+ T+ L+ C +R+ EA+ ++ V
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV- 178
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
P ++ LI GL K EA+ + MV +G +P L Y ++G K G++++
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 477 ATMLRKEMFENQVRQE 492
A L K+M + ++ +
Sbjct: 239 ALSLLKKMEKGKIEAD 254
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 169/314 (53%), Gaps = 17/314 (5%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAG 232
N + + +++ + ++G+ V T N+LI + +G SDA+
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN--------------YGRWSDASRL 313
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+ ++R ++ PNV TF+AL+ F +EG + E ++ EM + +PD ++YS L+ F
Sbjct: 314 LSDMIER--KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C R+ EA+ ++E M K+ +VV YNT+I GFC+ + E FREM G+ ++
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ L++G+ +A + D+A +V+ M G P+ T +L+ LC+ +V AL + +
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
+ + + P +Y +I+G+C+ GK+E+ + + KG +P++ Y+ + G+ ++G
Sbjct: 492 -LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 550
Query: 473 NVEMATMLRKEMFE 486
E A L +EM E
Sbjct: 551 LKEEADALFREMKE 564
Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 38/297 (12%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
DA G VK R P++ F+ L+ + F+ V + +M LG + Y+YS+
Sbjct: 64 DAVNLFGDMVKS--RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE----------IGEMA--- 334
L+ FC ++ A + +M E D+V N+++ GFC +G+M
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 335 -------------------RAEE---FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAI 372
RA E M + G + VT+ +VNG C+ GD+D A+
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 373 LVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKG 432
+ M + EP +I LC+ + V +AL++ K G+ P +Y LI+
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRC 300
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
LC G+ +A ++ ++M+ + P++ +SA ID ++KEG + A L EM + +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 143/327 (43%), Gaps = 22/327 (6%)
Query: 159 FVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYE 217
+ + +LI C C ++ + ++ +M G + T N+L+ G G
Sbjct: 117 YTYSILINCFCRR----SQLSLALAVLAKMMKLGYEPDIVTLNSLL------NGFCHGNR 166
Query: 218 IYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
I SDA + +G+ V+ + +P+ TFN L+ G +R + + M G
Sbjct: 167 I--------SDAVSLVGQMVE--MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
C+PD +Y +++ C+ + A L ++M +E VV YNTII C + A
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
F EM G+ + VT+ L+ C G A + +DM + P T LI
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
+ ++ EA + L ++K + P +Y LI G C +++EA + M+ K P+
Sbjct: 337 VKEGKLVEA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ Y+ I G+ K V+ L +EM
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREM 422
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 1/211 (0%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P +S L++ + + L E+M++ + H++ Y+ +I FC +++ A
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+M G E VT L+NG+C + A+ + M G++P+ T LI L
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
R EA+ ++ VVK G P +Y ++ GLC+ G ++ AL + +M EP +
Sbjct: 199 HNRASEAVALVDRMVVK-GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
IY+ ID NV A L EM +R
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 141/304 (46%), Gaps = 27/304 (8%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
KL++ ++K R F + LI C+ ++++ + +++S+ V T N
Sbjct: 347 KLYDEMIK--RSIDPDIFTYSSLINGFCMH----DRLDEAKHMFELMISKDCFPNVVTYN 400
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
LI + K V G E++RE + G N T+ L+ GF++
Sbjct: 401 TLIKGFCKAKRVDEGMELFRE---MSQRGLVG-------------NTVTYTTLIHGFFQA 444
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
+ + V+ +M G PD +YS+L+ C ++ A ++E ++ +E D+ Y
Sbjct: 445 RECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
Query: 321 NTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCR 380
N +I G C+ G++ + F + L GV+ + VT+ +++G+CR G + A ++ +M
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Query: 381 KGFEPEGSTIEVLI-GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+G P+ T LI L D + A I + R + F + S + L+ + +G++
Sbjct: 565 EGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR---FVGDASTIGLVTNMLHDGRL 621
Query: 440 EEAL 443
+++
Sbjct: 622 DKSF 625
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 99/207 (47%), Gaps = 1/207 (0%)
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
Y Y + + ++ +A L+ +M +V ++ ++ ++ + +
Sbjct: 47 YDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 106
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G+ + T+ L+N +CR + A+ V M + G+EP+ T+ L+ C R
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ +A+ ++ ++V+ G P ++ LI GL + EA+ + MV KG +P L Y
Sbjct: 167 ISDAVSLV-GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQV 489
++G K G++++A L K+M + ++
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKI 252
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 152/265 (57%), Gaps = 3/265 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + ++R ++ PNV TF+AL+ F +EG + E ++ EM + +PD
Sbjct: 306 YGRWSDASRLLSDMIER--KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
++YS L+ FC R+ EA+ ++E M K+ +VV Y+T+I GFC+ + E FRE
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G+ ++VT+ L++G+ +A D D+A +V+ M G P T +L+ LC +
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ +A+ + + + + + P +Y +I+G+C+ GK+E+ ++ + KG P++ Y+
Sbjct: 484 LAKAMVVFE-YLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Query: 463 AFIDGYMKEGNVEMATMLRKEMFEN 487
I G+ ++G+ E A L K+M E+
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKED 567
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 119/258 (46%), Gaps = 3/258 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
SDA A + + V+ + +P+ TF L+ G + + + +M + GC+PD +Y
Sbjct: 170 SDAVALVDQMVE--MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ C+ + A L ++M +E DVV YNTII G C+ M A F EM
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+ T+ L++ C G A + +DM + P T LI + ++ EA
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ L ++K + P +Y LI G C +++EA + M+ K P++ YS I
Sbjct: 348 -EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 467 GYMKEGNVEMATMLRKEM 484
G+ K VE L +EM
Sbjct: 407 GFCKAKRVEEGMELFREM 424
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 127/248 (51%), Gaps = 5/248 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T ++L+ G+ + +M +G +PD ++++ L+ + EA L
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M + + D+V Y T++ G C+ G++ A ++M +E+ V + +++G C+
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+D A+ ++ +M KG P+ T LI LC+ R +A +L + +++ + P
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL-SDMIERKINPNVV 329
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI +EGK+ EA K+ EM+ + +P + YS+ I+G+ ++ A K M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA----KHM 385
Query: 485 FENQVRQE 492
FE + ++
Sbjct: 386 FELMISKD 393
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 116/239 (48%), Gaps = 1/239 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ +V +N ++ G + + +++ EM G PD ++YS L++ C R +A
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L +M ++ + +VV ++ +I F + G++ AE+ + EM ++ T+ L+NG
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C +D A ++ M K P T LI C +RV E +++ + + + GL
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR-EMSQRGLVG 431
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y LI G + + A V +MV G P++ Y+ +DG K G + A ++
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 133/296 (44%), Gaps = 8/296 (2%)
Query: 199 CNALIWEVSRGKGVISGYEIYR----EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALM 254
C + WE S EI R ++ +D DA G VK R P++ FN L+
Sbjct: 34 CGSGCWERSFASASGDYREILRNRLSDIIKVD-DAVDLFGDMVKS--RPFPSIVEFNKLL 90
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
+ FE V + +M LG D Y+YS+ + FC ++ A + +M E
Sbjct: 91 SAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYE 150
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
D+V ++++ G+C ++ A +M G + + TF L++G A+ +
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 375 YNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLC 434
+ M ++G +P+ T ++ LC + + AL +LK ++ K + Y +I GLC
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK-KMEKGKIEADVVIYNTIIDGLC 269
Query: 435 EEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+ M++AL + EM KG P + YS+ I G A+ L +M E ++
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 21/273 (7%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
D +FE+++ ++C + LIK + K ++E +++ R + RGL
Sbjct: 380 DEAKHMFELMIS--KDCFPNVVTYSTLIKGFCKAK---RVEEGMELFREMSQRGLVGNTV 434
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T LI + + + +++++ V V PN+ T+N L+ G
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVS----------------VGVHPNILTYNILLDGL 478
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G K V+ + R EPD Y+Y++++ C+ ++ + +L+ + K V +V
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
+AYNT+I GFC G A+ ++M G +S T+ L+ R GD +++ + +
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
M GF + STI ++ L D R LD+L
Sbjct: 599 MRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 631
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
D++ +M + P ++ L++ + + L E+M+ + HD+ Y+ I F
Sbjct: 69 DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C +++ A +M G E VT L+NGYC + + A+ + + M G++P+
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI L + EA+ ++ ++V+ G P +Y ++ GLC+ G ++ AL +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVD-QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+M E + IY+ IDG K +++ A L EM +R +
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
++ +A L+ +M +V +N ++ ++ + +M G+ T+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
+N +CR + A+ V M + G+EP+ T+ L+ C +R+ +A+ ++ ++V+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD-QMVE 181
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
G P ++ LI GL K EA+ + +MV +G +P L Y ++G K G++++
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 477 ATMLRKEMFENQVRQE 492
A L K+M + ++ +
Sbjct: 242 ALSLLKKMEKGKIEAD 257
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 172/350 (49%), Gaps = 23/350 (6%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI------WEVSRGK-- 210
+ F +LIK C E IEK D++ L G S V LI E+ + K
Sbjct: 164 YSFGILIKGCCEAGEIEK---SFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220
Query: 211 -------GVISGYEIYREVF-GLDSDATAGIGKDVKRVVR---VRPNVHTFNALMVGFYR 259
G+++ Y + GL + G ++ ++ V PN++T+N +M +
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK 280
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
+G + V+ EM G + +Y+ L+ C E ++ EA K+ ++M+ + +++
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT 340
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YNT+I GFC +G++ +A R++ G+ S VT+ LV+G+CR GD A + +M
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
+G +P T +LI + +A+ L+ + + GL P +Y LI G C +G+M
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQ-LRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EA ++ MV K EP+ IY+ I GY KEG+ A L KEM E ++
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 124/252 (49%), Gaps = 7/252 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+V +V++F L+ G G EK D+ +E+ G P+ Y+ L+ C++ + +A
Sbjct: 158 KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ L+ EM + + Y +I G + G + E + +M GV + T+ ++N
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA---LDILKARVVKFG 418
C+ G A V+++M +G T LIG LC + ++ EA +D +K+ G
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD----G 333
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ P +Y LI G C GK+ +AL + ++ +G PSL Y+ + G+ ++G+ A
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA 393
Query: 479 MLRKEMFENQVR 490
+ KEM E ++
Sbjct: 394 KMVKEMEERGIK 405
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 131/292 (44%), Gaps = 41/292 (14%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL 163
++ +Y T+I L R + A V+ ++S +P L + L+ + CG
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVD-QMKSDGINPNLITYNTLIDGF--CG-------- 350
Query: 164 LIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF 223
+ K+ + + R L SRGLS + T N L+ R KG
Sbjct: 351 ----------VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR-KG------------ 387
Query: 224 GLDSDATAGIGKDVKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPD 281
T+G K VK + ++P+ T+ L+ F R EK + + M LG PD
Sbjct: 388 -----DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442
Query: 282 CYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFR 341
++YSVL+ FC + +M EA +L++ M +KN E + V YNT+I G+C+ G RA + +
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLK 502
Query: 342 EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
EM + + ++ +++ C+ A + M G +P S + ++
Sbjct: 503 EMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+E ++N Y ++ ++ +I +N+M GF P + L+ + +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
K L S+ LIKG CE G++E++ + E+ GF P++ IY+ IDG K+G +
Sbjct: 157 SKVVL--DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 475 EMATMLRKEM 484
E A L EM
Sbjct: 215 EKAKDLFFEM 224
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 149/272 (54%), Gaps = 3/272 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + ++R ++ P+V TF+AL+ F +EG + E ++ EM + +P
Sbjct: 304 YGRWSDASRLLSDMIER--KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+YS L+ FC R+ EA++++E M K+ DVV YNT+I GFC+ + E FRE
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G+ ++VT+ L+ G +AGD D A ++ +M G P T L+ LC +
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ +A+ + + + + + PT +Y +I+G+C+ GK+E+ + + KG +P + Y+
Sbjct: 482 LEKAMVVFE-YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
I G+ ++G+ E A L KEM E+ G
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 122/239 (51%), Gaps = 1/239 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P V +N ++ G + + +++ EM G P+ +YS L++ C R +A
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L +M ++ + DV ++ +I F + G++ AE+ + EM ++ S VT+ L+NG
Sbjct: 311 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C +D A ++ M K P+ T LI C +RV E +++ + + + GL
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR-EMSQRGLVG 429
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y LI+GL + G + A ++ EMV G P++ Y+ +DG K G +E A ++
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 148/317 (46%), Gaps = 7/317 (2%)
Query: 178 ETCVDIVRMLMSRGLS-VKVSTCNALIWEVSRGKGVISGYEIYREVFGLDS----DATAG 232
+T D L GLS +K+ AL E+ + + S E + + + D
Sbjct: 43 KTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVIS 102
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
+G+ ++ + + N +T++ L+ F R V +M +LG EP+ + S L+ +
Sbjct: 103 LGEQMQNL-GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGY 161
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C +R+ EA L ++M + + V +NT+I G + + A M G +
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
VT+ +VNG C+ GD D A + N M + EP +I LC + + +AL++ K
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
K G+ P +Y LI LC G+ +A ++ ++M+ + P + +SA ID ++KEG
Sbjct: 282 METK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Query: 473 NVEMATMLRKEMFENQV 489
+ A L EM + +
Sbjct: 341 KLVEAEKLYDEMVKRSI 357
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 1/245 (0%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
V +PN TFN L+ G + + + M GC+PD +Y V++ C+
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
A L +M +E V+ YNTII G C+ M A F+EM G+ + VT+ L+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
+ C G A + +DM + P+ T LI + ++ EA + L +VK +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA-EKLYDEMVKRSI 357
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P+ +Y LI G C +++EA ++ MV K P + Y+ I G+ K VE
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 480 LRKEM 484
+ +EM
Sbjct: 418 VFREM 422
Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 148/315 (46%), Gaps = 13/315 (4%)
Query: 185 RMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF---GLD----SDATAGIGKDV 237
R L+ RG + VS + W R + Y+ YRE GL DA A G+ V
Sbjct: 17 RSLVVRGNAATVSPSFSFFWR--RAFSGKTSYD-YREKLSRNGLSELKLDDAVALFGEMV 73
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
K R P++ F+ L+ + F+ V + +M LG + Y+YS+L+ FC +
Sbjct: 74 KS--RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQ 131
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A + +M E ++V ++++ G+C ++ A +M ++G + ++VTF
Sbjct: 132 LPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 191
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++G A+ + + M KG +P+ T V++ LC + A ++L ++ +
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN-KMEQG 250
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
L P Y +I GLC+ M++AL + EM KG P++ YS+ I G A
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310
Query: 478 TMLRKEMFENQVRQE 492
+ L +M E ++ +
Sbjct: 311 SRLLSDMIERKINPD 325
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 128/273 (46%), Gaps = 21/273 (7%)
Query: 138 DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVS 197
D ++FE +V + C ++ LIK + K ++E +++ R + RGL
Sbjct: 378 DEAKQMFEFMVS--KHCFPDVVTYNTLIKGFCKYK---RVEEGMEVFREMSQRGLVGNTV 432
Query: 198 TCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
T N LI + + EI++E+ SD V PN+ T+N L+ G
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMV---SDG-------------VPPNIMTYNTLLDGL 476
Query: 258 YREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV 317
+ G EK V+ + R EP Y+Y++++ C+ ++ + L+ + K V+ DV
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Query: 318 VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYND 377
VAYNT+I GFC G A+ F+EM G +S + L+ R GD +++ + +
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Query: 378 MCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
M GF + STI ++ L D R LD+L
Sbjct: 597 MRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 629
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 199/428 (46%), Gaps = 28/428 (6%)
Query: 69 LTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVI 128
L P ++ L NNPH+ RF+ F++ K +HS +Y + L +A L A +
Sbjct: 67 LNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMF 126
Query: 129 RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK------CCLEVKNIEKIETCVD 182
++S P +L LV ++ E G F LL++ CC+ V ++ + T V
Sbjct: 127 E-CMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSL--LNTLVK 183
Query: 183 IVRMLMSRGL---SVKVSTCN--ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDV 237
+ R+ + L ++ +CN + RG + E E+ G+ S G G
Sbjct: 184 LDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS----GFG--- 236
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG-CEPDCYSYSVLMAVFCEER 296
P++ T+N L+ GF + K +++ ++ C PD +Y+ +++ +C+
Sbjct: 237 -----CEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+MREA L ++M + V +N ++ G+ + GEM AEE +M G VTF
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L++GYCR G V ++ +M +G P T +LI LC++ R+ +A ++L K
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
+ P Y +I G C+ GK+ EA + EM K +P ++ I G+ +G +
Sbjct: 412 -DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 477 ATMLRKEM 484
A + +M
Sbjct: 471 AVSIFHKM 478
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 8/194 (4%)
Query: 303 KLWEEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ WE R K N+ H YN + C+ G A + F M GV ++ LV+
Sbjct: 88 RFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS 147
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEV--LIGELCDKRRVFEALDILKARVVKFGL 419
+ G + A + + FE EG + V L+ L RV +A+ + + +F
Sbjct: 148 FAEKGKLHFA----TALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHL-RFQS 202
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
K++ LI+GLC GK E+AL++ M G G EP + Y+ I G+ K + A+
Sbjct: 203 CNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE 262
Query: 480 LRKEMFENQVRQED 493
+ K++ V D
Sbjct: 263 MFKDVKSGSVCSPD 276
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+ +P+ TF L++G +G + ++ +M +GC PD + S L++ + +EA
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Query: 302 EKLWEEMRDKNVEHDVVAYNT 322
L + R K ++VV T
Sbjct: 507 YHLNQIAR-KGQSNNVVPLET 526
>sp|Q3ECH5|PP107_ARATH Pentatricopeptide repeat-containing protein At1g66345,
mitochondrial OS=Arabidopsis thaliana GN=At1g66345 PE=1
SV=1
Length = 544
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 214/484 (44%), Gaps = 39/484 (8%)
Query: 11 FSVSKPKPKPQLLS---QFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS 67
+ VS+ P+L+ FS+ ++ P+ Q LI + L +S W L + S
Sbjct: 16 YLVSQSTRSPKLIHGFFSFSSKTNPNPNKQQQILIDYISKSL---QSNDTWETLSTKFSS 72
Query: 68 -GLTPTQFSQIALGLKN--NPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPA 124
L+ + I L KN AL FF ++ H +H + SYA IHIL +ARL+ A
Sbjct: 73 IDLSDSLIETILLRFKNPETAKQALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDA 132
Query: 125 RDVIRVAL-RSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDI 183
R +I +L SP P L + L+ TY S P VFDLL++C I +E D+
Sbjct: 133 RALIESSLLNSP---PDSDLVDSLLDTYEISSSTPLVFDLLVQC---YAKIRYLELGFDV 186
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRV 243
+ L G ++ V T N LI S+ K + IY I K R+
Sbjct: 187 FKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYE----------CAIDK------RI 230
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
PN T ++ +EG ++V D+ + C P + L+ EE R+ E+
Sbjct: 231 YPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMS 290
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L + + KN+ D + Y+ ++ + G++ A + F EM G ++S + V C
Sbjct: 291 LLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCC 350
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD---KRRVFEALDILKARVVKFGLF 420
GDV A + ++M G P T LIG + + E +++ R GL
Sbjct: 351 EKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTR----GLM 406
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
P+ ++ ++K + + + A ++ + + KGF P YS I G+++ +++ A L
Sbjct: 407 PSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKL 466
Query: 481 RKEM 484
EM
Sbjct: 467 FYEM 470
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 1/226 (0%)
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+EG V+ EM + G + + Y+V + V CE+ ++EAE+L EM + V
Sbjct: 316 KEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDE 375
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+N +IGGF G + E+ M G+ S F +V + +V+ A +
Sbjct: 376 TFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKS 435
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
KGF P+ T LI + + +AL + + + P + + LI GLC GK
Sbjct: 436 IDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYR-KMSPGFEVFRSLIVGLCTCGK 494
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+E K M + EP+ +IY A I + K G+ A + EM
Sbjct: 495 VEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 154/387 (39%), Gaps = 52/387 (13%)
Query: 67 SGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCK----HSLSSYATIIHILSRARL-- 120
S TP F + +L L F F K LC S+ + T+IH S++++
Sbjct: 160 SSSTPLVFDLLVQCYAKIRYLELGFDVF---KRLCDCGFTLSVITLNTLIHYSSKSKIDD 216
Query: 121 -------------IGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKC 167
I P IR+ ++ + +LK EV+ R CG +++
Sbjct: 217 LVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLK--EVVDLLDRICGKRCLP-SVIVNT 273
Query: 168 CLEVKNIE--KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGL 225
L + +E +IE + +++ L+ + + V + +++ ++ ++S +++ E+
Sbjct: 274 SLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQR 333
Query: 226 DSDATAGI----------GKDVKRVVR---------VRPNVHTFNALMVGFYREGAFEKV 266
A + + DVK R V P TFN L+ GF R G EK
Sbjct: 334 GFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKG 393
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ M G P C +++ ++ + + A ++ + DK D Y+ +I G
Sbjct: 394 LEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRG 453
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
F E ++ +A + F EM + F L+ G C G V++ M ++ EP
Sbjct: 454 FIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPN 513
Query: 387 GSTIEVL------IGELCDKRRVFEAL 407
+ L IG+ + RV+ +
Sbjct: 514 ADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
+ +T ++ C+ G + + + + +C K P L+ + ++ R+ E++ +L
Sbjct: 233 NEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLL 292
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
K ++K + T Y ++ +EG + A KV EM+ +GF + +Y+ F+ +
Sbjct: 293 KRLLMKNMVVDT-IGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCE 351
Query: 471 EGNVEMATMLRKEMFENQVRQED 493
+G+V+ A L EM E+ V D
Sbjct: 352 KGDVKEAERLLSEMEESGVSPYD 374
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 172/343 (50%), Gaps = 30/343 (8%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYRE------------- 221
++ V +V ++ G + NA+I + + K V ++ ++E
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 222 ---VFGLD-----SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEM 273
V GL SDA + +K+ ++ PNV T++AL+ F + G + ++++ EM
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKK--KITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Query: 274 ARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEM 333
R+ +PD +YS L+ C R+ EA ++++ M K DVV+YNT+I GFC+ +
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346
Query: 334 ARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVL 393
+ FREM G+ S++VT+ L+ G+ +AGDVD A ++ M G P+ T +L
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 394 IGELCDKRRVFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+G LCD + +AL I ++ R + + +Y +I+G+C+ GK+EEA + +
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIV----TYTTVIRGMCKTGKVEEAWSLFCSLS 462
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
KG +P + Y+ + G +G + L +M + + + D
Sbjct: 463 LKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 128/257 (49%), Gaps = 2/257 (0%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
D +GK ++ V+ +R +++TFN ++ F + +M +LG EPD +
Sbjct: 102 DVVISLGKKME-VLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGS 160
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ FC R+ +A L ++M + + D+VAYN II C+ + A +FF+E+ G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ + VT+ LVNG C + A + +DM +K P T L+ +V EA
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++ + +V+ + P +Y LI GLC +++EA ++ MV KG + Y+ I+G
Sbjct: 281 ELFE-EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 468 YMKEGNVEMATMLRKEM 484
+ K VE L +EM
Sbjct: 340 FCKAKRVEDGMKLFREM 356
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 113/232 (48%), Gaps = 5/232 (2%)
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
R+ D++ +M + P ++ L++ + ++ L ++M + +D+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
+N +I FC +++ A +M G E VT LVNG+CR V A+ + + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
G++P+ +I LC +RV +A D K + + G+ P +Y L+ GLC +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK-EIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+A ++ ++M+ K P++ YSA +D ++K G V A KE+FE VR
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA----KELFEEMVR 288
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 160/363 (44%), Gaps = 48/363 (13%)
Query: 34 PSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIAL--GLKNNPHL--AL 89
P ++N A + SL R ++ + R G+ P + AL GL N+ A
Sbjct: 188 PDIVAYN--AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVK 149
R S K + + ++ Y+ ++ + + A+++ +R DP + + L+
Sbjct: 246 RLLSDMIKKKITPNVIT-YSALLDAFVKNGKVLEAKELFEEMVRMSI-DPDIVTYSSLIN 303
Query: 150 TYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG 209
CL ++I+ + +++S+G V + N LI +
Sbjct: 304 GL----------------CLH----DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 210 KGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
K V G +++RE+ GL S N T+N L+ GF++ G +K +
Sbjct: 344 KRVEDGMKLFREMSQRGLVS------------------NTVTYNTLIQGFFQAGDVDKAQ 385
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
+ + +M G PD ++Y++L+ C+ + +A ++E+M+ + ++ D+V Y T+I G
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C+ G++ A F + L G++ VT+ +++G C G + +Y M ++G
Sbjct: 446 CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Query: 388 STI 390
T+
Sbjct: 506 CTL 508
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 145/268 (54%), Gaps = 9/268 (3%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + +++ ++ PN+ TFNAL+ F +EG F + E ++ +M + +PD
Sbjct: 308 YGRWSDASQLLSDMIEK--KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
++Y+ L+ FC R+ +A++++E M K+ DVV YNT+I GFC+ + E FRE
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK-- 400
M G+ +VT+ L+ G GD D+A V+ M G P+ T +L+ LC+
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 401 -RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+ E D ++ +K ++ Y +I+G+C+ GK+++ + + KG +P++
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYI----YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFEN 487
Y+ I G + ++ A L K+M E+
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKED 569
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 2/262 (0%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
D +G+ ++R+ + ++T+N L+ F R + +M +LG EP + S
Sbjct: 102 DVVISLGEKMQRL-EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 160
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ +C +R+ +A L ++M + D + + T+I G + + A M G
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ + VT+ +VNG C+ GD D A+ + N M E + +I LC R V +AL
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++ K K G+ P +Y LI LC G+ +A ++ ++M+ K P+L ++A ID
Sbjct: 281 NLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339
Query: 468 YMKEGNVEMATMLRKEMFENQV 489
++KEG A L +M + +
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSI 361
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 1/251 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ +V FN ++ + + +++ EM G P+ +YS L++ C R +A
Sbjct: 255 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 314
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L +M +K + ++V +N +I F + G+ AE+ + +M ++ T+ LVNG
Sbjct: 315 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 374
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C +D A ++ M K P+ T LI C +RV + ++ + + GL
Sbjct: 375 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR-EMSHRGLVG 433
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI+GL +G + A KV +MV G P + YS +DG G +E A +
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493
Query: 482 KEMFENQVRQE 492
M +++++ +
Sbjct: 494 DYMQKSEIKLD 504
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 155/351 (44%), Gaps = 27/351 (7%)
Query: 140 KLKLFEVLV----KTYR-ECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLS 193
K+K F+V++ K R E + +++LI C C +I + ++ +M G
Sbjct: 97 KMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRR----SQISLALALLGKMMKLGYE 152
Query: 194 VKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNAL 253
+ T ++L+ GK + SDA A + + V+ + RP+ TF L
Sbjct: 153 PSIVTLSSLLNGYCHGKRI--------------SDAVALVDQMVE--MGYRPDTITFTTL 196
Query: 254 MVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNV 313
+ G + + + M + GC+P+ +Y V++ C+ A L +M +
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI 256
Query: 314 EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAIL 373
E DVV +NTII C+ + A F+EM G+ + VT+ L++ C G A
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 374 VYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
+ +DM K P T LI + + EA + L ++K + P +Y L+ G
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA-EKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
C ++++A ++ MV K P + Y+ I G+ K VE T L +EM
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 137/306 (44%), Gaps = 31/306 (10%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
KL++ ++K R F ++ L+ C+ ++++ + ++S+ V T N
Sbjct: 351 KLYDDMIK--RSIDPDIFTYNSLVNGFCMH----DRLDKAKQMFEFMVSKDCFPDVVTYN 404
Query: 201 ALIWEVSRGKGVISGYEIYREVF--GLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
LI + K V G E++RE+ GL D T+ L+ G +
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTV------------------TYTTLIQGLF 446
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+G + + V+ +M G PD +YS+L+ C ++ +A ++++ M+ ++ D+
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
Y T+I G C+ G++ + F + L GV+ + VT+ +++G C + A + M
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Query: 379 CRKGFEPEGSTIEVLI-GELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEG 437
G P T LI L D + A I + R + F + S + L+ + +G
Sbjct: 567 KEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR---FVGDASTIGLVANMLHDG 623
Query: 438 KMEEAL 443
+++++
Sbjct: 624 RLDKSF 629
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+D AI ++ M + P L+ + K + F+ + L ++ + + +Y
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIA-KMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
LI C ++ AL + +M+ G+EPS+ S+ ++GY + A L +M E
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 488 QVRQE 492
R +
Sbjct: 185 GYRPD 189
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 158/293 (53%), Gaps = 6/293 (2%)
Query: 195 KVSTCNALIWEVSRGKGVISGYEIYRE-VFGLDSDATAGIGKDVKRVVR---VRPNVHTF 250
++ A++ ++ G++ Y ++G + G+ +V +R +PNV+++
Sbjct: 368 RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
L+ GF + G ++ +V EM+ G +P+ ++ L++ FC+E R+ EA +++ EM
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 311 KNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDS 370
K + DV +N++I G CE+ E+ A R+M GV +++VT+ L+N + R G++
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 371 AILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLI 430
A + N+M +G + T LI LC V +A + + ++++ G P+ S LI
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE-KMLRDGHAPSNISCNILI 606
Query: 431 KGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA-TMLRK 482
GLC G +EEA++ Q EMV +G P + +++ I+G + G +E TM RK
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 124/245 (50%), Gaps = 1/245 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++PN FN L+ F +E + +++ EM R GC+PD Y+++ L++ CE ++ A
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L +M + V + V YNT+I F GE+ A + EM G +T+ L+ G
Sbjct: 515 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL 574
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
CRAG+VD A ++ M R G P + +LI LC V EA++ K V++ G P
Sbjct: 575 CRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR-GSTPD 633
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ LI GLC G++E+ L + ++ +G P ++ + K G V A +L
Sbjct: 634 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLD 693
Query: 483 EMFEN 487
E E+
Sbjct: 694 EGIED 698
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 4/243 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P + TF +M F + + +M + GC P+ Y L+ + R+ EA
Sbjct: 212 KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEA 271
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L EEM D +N +I G C+ + A + M + G +T+ +L+NG
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G VD+A D+ + +PE LI R+ +A +L V +G+ P
Sbjct: 332 LCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI G +EG + AL+V +M KG +P++ Y+ +DG+ K G ++ A +
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 482 KEM 484
EM
Sbjct: 448 NEM 450
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 67/176 (38%), Gaps = 10/176 (5%)
Query: 315 HDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374
H Y +IG GE + +M G+ F ++ Y +AG +
Sbjct: 109 HSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRL 168
Query: 375 YNDM-----CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+M C F+ +E+L+ C K D+L ++ PT ++ +
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIP-----PTLFTFGVV 223
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
+K C +++ AL + +M G P+ IY I K V A L +EMF
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 203/441 (46%), Gaps = 26/441 (5%)
Query: 53 RSKSRWNHLLS--LCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYAT 110
R K W LS L L +I +G ++P L LRFF+F HS +S+
Sbjct: 50 RGKRSWEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCI 109
Query: 111 IIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECG-SAPFVFDLLIKCCL 169
+IH L +A L PA +++ L + F VL Y +C S+ FDLLI+ +
Sbjct: 110 LIHALVKANLFWPASSLLQTLLLRALKPSDV--FNVLFSCYEKCKLSSSSSFDLLIQHYV 167
Query: 170 EVKNIEKIETCVDIVRMLMSR-GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSD 228
+ ++ V + +M++++ L +V T +AL+ + + + E++ ++
Sbjct: 168 RSR---RVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVS---- 220
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
V +RP+V+ + ++ + +++ M GC+ + Y+VL
Sbjct: 221 ------------VGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVL 268
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ C+++++ EA + +++ K+++ DVV Y T++ G C++ E E EM
Sbjct: 269 IDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRF 328
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
S LV G + G ++ A+ + + G P LI LC R+ EA +
Sbjct: 329 SPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA-E 387
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+L R+ K GL P + +Y LI C GK++ AL EMV G + S+ Y++ I+G+
Sbjct: 388 LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH 447
Query: 469 MKEGNVEMATMLRKEMFENQV 489
K G++ A EM ++
Sbjct: 448 CKFGDISAAEGFMAEMINKKL 468
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 3/243 (1%)
Query: 237 VKRVVR--VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
VKRVV V PN+ +NAL+ + F + E ++ M ++G P+ +YS+L+ +FC
Sbjct: 355 VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCR 414
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
++ A EM D ++ V YN++I G C+ G+++ AE F EM +E + VT
Sbjct: 415 RGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVT 474
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ GYC G ++ A+ +Y++M KG P T L+ L + +A+ + +
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN-EM 533
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
++ + P +Y +I+G CEEG M +A + EM KG P Y I G G
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 475 EMA 477
A
Sbjct: 594 SEA 596
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 158/353 (44%), Gaps = 52/353 (14%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
KIE +++V+ ++ G+S + NALI + +G+ ++ D IG
Sbjct: 347 KIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF--------DRMGKIG- 397
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+RPN T++ L+ F R G + EM G + Y Y+ L+ C+
Sbjct: 398 -------LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ AE EM +K +E VV Y +++GG+C G++ +A + EM G+ S TF
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G RAG + A+ ++N+M +P T V+I C++ + +A + LK
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570
Query: 416 KFGLFPTEKSYMFLIKGLC-----------------------------------EEGKME 440
K G+ P SY LI GLC EGK+E
Sbjct: 571 K-GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 441 EALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
EAL V EMV +G + L Y IDG +K + ++ L KEM + ++ +D
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDD 682
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 156/351 (44%), Gaps = 58/351 (16%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI---------WEVSRG 209
+++ +I+ E+K++ + + +++ + + G V + N LI WE
Sbjct: 228 YIYTGVIRSLCELKDLSRAK---EMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGI 284
Query: 210 KGVISGYEIYREV-------FGLDSDATAGIG---KDVKRVVRVRPNVHTFNALMVGFYR 259
K ++G ++ +V +GL IG D +R P+ ++L+ G +
Sbjct: 285 KKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRK 344
Query: 260 EGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVA 319
G E+ ++ + G P+ + Y+ L+ C+ R+ EAE L++ M + + V
Sbjct: 345 RGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVT 404
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
Y+ +I FC G++ A F EM +G++ S + L+NG+C+ GD+ +A
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA-------- 456
Query: 380 RKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKM 439
E + E+ +K+ L PT +Y L+ G C +GK+
Sbjct: 457 -----------EGFMAEMINKK-----------------LEPTVVTYTSLMGGYCSKGKI 488
Query: 440 EEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
+AL++ EM GKG PS+ ++ + G + G + A L EM E V+
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK 539
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 9/247 (3%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+ L+ GF REG E+ V EM + G + D Y VL+ + + + L +EM
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
D+ ++ D V Y ++I + G+ A + M G + VT+ ++NG C+AG V+
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 370 SAILVYNDMCRKGFEPE----GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
A ++ + M P G +++L D ++ E L ++K GL +
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE----LHNAILK-GLLANTAT 789
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI+G C +G++EEA ++ M+G G P Y+ I+ + +V+ A L M
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 486 ENQVRQE 492
E +R +
Sbjct: 850 EKGIRPD 856
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 3/215 (1%)
Query: 280 PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEF 339
P+ + S L+ + R A +L+ +M + DV Y +I CE+ +++RA+E
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 340 FREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
M +G + + V + L++G C+ V A+ + D+ K +P+ T L+ LC
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 400 KRRVFEALDILKARV-VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ L+++ + ++F P+E + L++GL + GK+EEAL + +V G P+L
Sbjct: 310 VQEFEIGLEMMDEMLCLRFS--PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367
Query: 459 EIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
+Y+A ID K A +L M + +R D
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPND 402
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 112/220 (50%), Gaps = 11/220 (5%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ + +++ + G F++ +W M GC P+ +Y+ ++ C+ + EAE
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEI---GE--MARAEEFFREMGLSGVESSSVTFEH 357
L +M+ + + V Y G F +I GE M +A E + L G+ +++ T+
Sbjct: 738 VLCSKMQPVSSVPNQVTY----GCFLDILTKGEVDMQKAVELHNAI-LKGLLANTATYNM 792
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L+ G+CR G ++ A + M G P+ T +I ELC + V +A+++ + K
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK- 851
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
G+ P +Y LI G C G+M +A +++ EM+ +G P+
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+N L+ GF R+G E+ ++ M G PDC +Y+ ++ C +++A +LW
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
M +K + D VAYNT+I G C GEM +A E EM G+ ++ T
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE-ERRMREAEK 303
PN T+ A++ G + G + E + +M + P+ +Y + + + E M++A +
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE 774
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L + K + + YN +I GFC G + A E M GV +T+ ++N C
Sbjct: 775 LHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R DV AI ++N M KG P+ LI C + +A + L+ +++ GL P
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE-LRNEMLRQGLIPNN 892
Query: 424 KS 425
K+
Sbjct: 893 KT 894
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 149/272 (54%), Gaps = 3/272 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + ++R ++ PNV TFN+L+ F +EG + E ++ EM + +P+
Sbjct: 288 YGRWSDASRLLSDMLER--KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+Y+ L+ FC R+ EA++++ M K+ DVV YNT+I GFC+ ++ E FR+
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G+ ++VT+ L++G+ +A D D+A +V+ M G P T L+ LC +
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ +A+ + + + K + P +Y + +G+C+ GK+E+ + + KG +P + Y+
Sbjct: 466 LEKAMVVFE-YLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 463 AFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
I G+ K+G E A L +M E+ + G
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 1/233 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RP+V T+++L+ G + + +M P+ +++ L+ F +E ++ EAE
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL++EM ++++ ++V YN++I GFC + A++ F M VT+ L+NG+
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A V + ++ DM R+G T LI A + K ++V G+ P
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK-QMVSDGVHPN 449
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
+Y L+ GLC+ GK+E+A+ V + EP + Y+ +G K G VE
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 110/213 (51%), Gaps = 1/213 (0%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
+++ EM G PD ++YS L++ C R +A +L +M ++ + +VV +N++I F
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
+ G++ AE+ F EM ++ + VT+ L+NG+C +D A ++ M K P+
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
T LI C ++V + +++ + + + GL +Y LI G + + A V
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFR-DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+MV G P++ Y+ +DG K G +E A ++
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 121/250 (48%), Gaps = 1/250 (0%)
Query: 240 VVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMR 299
++ V N++T+N ++ R + +M +LG P + + L+ FC R+
Sbjct: 93 ILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 152
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
EA L ++M + + D V + T++ G + + + A M + G + VT+ ++
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
NG C+ G+ D A+ + N M + E + +I LC R V +AL++ K G+
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK-GI 271
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
P +Y LI LC G+ +A ++ ++M+ + P++ +++ ID + KEG + A
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 480 LRKEMFENQV 489
L EM + +
Sbjct: 332 LFDEMIQRSI 341
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 122/240 (50%), Gaps = 3/240 (1%)
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
A A +GK +K + P++ T N+L+ GF + + +M +G +PD +++ L
Sbjct: 119 ALAILGKMMK--LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTL 176
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ + + EA L E M K + D+V Y +I G C+ GE A +M +
Sbjct: 177 VHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI 236
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
E+ V + +++ C+ VD A+ ++ +M KG P+ T LI LC+ R +A
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+L + +++ + P ++ LI +EGK+ EA K+ EM+ + +P++ Y++ I+G+
Sbjct: 297 LL-SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 153/348 (43%), Gaps = 36/348 (10%)
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
AL F+ +K + + + +Y+++I L A ++ L N P + F L
Sbjct: 259 ALNLFTEMDNKGI-RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN-PNVVTFNSL 316
Query: 148 VKTYRECGS---APFVFDLLIKCCLEVKNI------------EKIETCVDIVRMLMSRGL 192
+ + + G A +FD +I+ ++ + ++++ I +++S+
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 193 SVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDAT-----------AGIGKDVKR 239
V T N LI + K V+ G E++R++ GL + A + +
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 240 VVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC 293
V + V PN+ T+N L+ G + G EK V+ + + EPD Y+Y+++ C
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 294 EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSV 353
+ ++ + L+ + K V+ DV+AYNT+I GFC+ G A F +M G S
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
T+ L+ + R GD ++ + +M F + ST ++ L D R
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGR 604
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 1/230 (0%)
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
++ D++ EM + P +S L++ + ++ E+M V H++ YN
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+I C +++ A +M G S VT L+NG+C + A+ + + M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
++P+ T L+ L + EA+ +++ VVK G P +Y +I GLC+ G+ + A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
L + +M E + IYS ID K +V+ A L EM +R +
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 162/315 (51%), Gaps = 17/315 (5%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
++++ +D++ + G+ V T N+LI G+ S G SDAT +
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLI------SGLCSS--------GRWSDATRMVS 245
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
KR + P+V TFNAL+ +EG + E+ + EM R +PD +YS+L+ C
Sbjct: 246 CMTKR--EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
R+ EAE+++ M K DVV Y+ +I G+C+ ++ + F EM GV ++VT
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ GYCRAG ++ A ++ M G P T VL+ LCD ++ +AL IL A +
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL-ADM 422
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
K G+ +Y +I+G+C+ G++ +A + + +G P + Y+ + G K+G
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482
Query: 475 EMATMLRKEMFENQV 489
A L ++M E+ +
Sbjct: 483 READALFRKMKEDGI 497
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 114/224 (50%), Gaps = 5/224 (2%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
D++ M + P +S L++ + ++ LWE+M+ + H++ N ++ F
Sbjct: 67 DLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C +++ A F +M G E S VTF L+NG+CR V A+ +++ M G++P
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+I LC ++V ALD+L R+ K G+ P +Y LI GLC G+ +A ++ +
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLN-RMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVS 245
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
M + P + ++A ID +KEG V A +E +E +R+
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRVSEA----EEFYEEMIRR 285
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 167/390 (42%), Gaps = 41/390 (10%)
Query: 125 RDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIV 184
R+++R +R + D L LF +V +C P + D + + ++K + + +
Sbjct: 50 REMLRNGIRFMKLDDSLDLFFHMV----QCRPLPSIADF-SRLLSAISKMKKYDVVIYLW 104
Query: 185 RMLMSRGLSVKVSTCNALIWEVSR-----------GKGVISGYEIYREVFG--------- 224
+ G+ + TCN L+ R GK + G+E FG
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 225 ---LDS----DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
D+ D G+G +PNV +N ++ G + + D+ M + G
Sbjct: 165 DRVYDALYMFDQMVGMG--------YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
PD +Y+ L++ C R +A ++ M + + DV +N +I + G ++ AE
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
EF+ EM ++ VT+ L+ G C +D A ++ M KG P+ T +LI
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C ++V + + + + G+ +Y LI+G C GK+ A ++ MV G P+
Sbjct: 337 CKSKKVEHGMKLF-CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
+ Y+ + G G +E A ++ +M +N
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKN 425
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++S+G V T + LI + K V G +++ E+ + VVR N
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM-------------SQRGVVR---N 360
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
T+ L+ G+ R G E+++ M G P+ +Y+VL+ C+ ++ +A +
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAG 366
+M+ ++ D+V YN II G C+ GE+A A + + + G+ T+ ++ G + G
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Query: 367 DVDSAILVYNDMCRKGFEPE 386
A ++ M G P
Sbjct: 481 LRREADALFRKMKEDGILPN 500
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 146/313 (46%), Gaps = 6/313 (1%)
Query: 173 NIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYR-EVFGLDSDATA 231
N+ I C ++R G + K A I E+ G G + Y + G
Sbjct: 133 NVPDIIPCTTLIRGFCRLGKTRKA----AKILEILEGSGAVPDVITYNVMISGYCKAGEI 188
Query: 232 GIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAV 291
V + V P+V T+N ++ G ++ +V M + C PD +Y++L+
Sbjct: 189 NNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C + + A KL +EMRD+ DVV YN ++ G C+ G + A +F +M SG + +
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+T ++ C G A + DM RKGF P T +LI LC K + A+DIL+
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
++ + G P SY L+ G C+E KM+ A++ MV +G P + Y+ + K+
Sbjct: 369 -KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 472 GNVEMATMLRKEM 484
G VE A + ++
Sbjct: 428 GKVEDAVEILNQL 440
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 109/211 (51%), Gaps = 1/211 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN ++N L+ GF +E ++ + M GC PD +Y+ ++ C++ ++ +A +
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ ++ K ++ YNT+I G + G+ +A + EM ++ ++T+ LV G
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R G VD AI +++ R G P T ++ LC R+ A+D L ++ G P E
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL-VFMINRGCKPNE 554
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGF 454
SY LI+GL EG +EAL++ E+ KG
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V TFN L+ R+G + D+ +M + GC+P+ SY+ L+ FC+E++M A +
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M + D+V YNT++ C+ G++ A E ++ G +T+ +++G +
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG AI + ++M K +P+ T L+G L + +V EA+ + G+ P
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH-EFERMGIRPNAV 520
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ ++ GLC+ + + A+ M+ +G +P+ Y+ I+G EG + A L E+
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 1/234 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PNV T N ++ G + E + +M R G P ++++L+ C + + A
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAID 365
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+ E+M + + ++YN ++ GFC+ +M RA E+ M G VT+ ++ C
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+ G V+ A+ + N + KG P T +I L + +A+ +L K L P
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK-DLKPDT 484
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y L+ GL EGK++EA+K E G P+ +++ + G K + A
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ E K E M D++ T+I GFC +G+ +A + + SG +T+
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
+++GYC+AG++++A+ V + R P+ T ++ LCD ++ +A+++L R+++
Sbjct: 178 MISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD-RMLQR 233
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+P +Y LI+ C + + A+K+ EM +G P + Y+ ++G KEG ++ A
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 478 TMLRKEM 484
+M
Sbjct: 294 IKFLNDM 300
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 14/245 (5%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V N H + G EG F+ +E+ M G PD + L+ FC + R+A
Sbjct: 103 VESNNHLRQMVRTGELEEG-FKFLEN----MVYHGNVPDIIPCTTLIRGFCRLGKTRKAA 157
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K+ E + DV+ YN +I G+C+ GE+ A M +S VT+ ++
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSL 214
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C +G + A+ V + M ++ P+ T +LI C V A+ +L + G P
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD-EMRDRGCTPD 273
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI-----DGYMKEGNVEMA 477
+Y L+ G+C+EG+++EA+K +M G +P++ ++ + G + +A
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 478 TMLRK 482
MLRK
Sbjct: 334 DMLRK 338
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 122/290 (42%), Gaps = 39/290 (13%)
Query: 104 SLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFD- 162
S+ ++ +I+ L R L+G A D++ + P++ C ++
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILE---KMPQHG---------------CQPNSLSYNP 384
Query: 163 LLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
LL C E +K++ ++ + ++SRG + T N ++ + + V EI +
Sbjct: 385 LLHGFCKE----KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ- 439
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
L S + P + T+N ++ G + G K + EM +PD
Sbjct: 440 --LSSKGCS-------------PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+YS L+ E ++ EA K + E + + V +N+I+ G C+ + RA +F
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 544
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
M G + + ++ L+ G G A+ + N++C KG + S +V
Sbjct: 545 MINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 145/275 (52%), Gaps = 9/275 (3%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + +++ ++ PN+ TFNAL+ F +EG F + E + +M + +PD
Sbjct: 233 YGRWSDASQLLSDMIEK--KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDI 290
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
++Y+ L+ FC R+ +A++++E M K+ D+ YNT+I GFC+ + E FRE
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 350
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK-- 400
M G+ +VT+ L+ G GD D+A V+ M G P+ T +L+ LC+
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 401 -RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+ E D ++ +K ++ Y +I+G+C+ GK+++ + + KG +P++
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYI----YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
Y+ I G + ++ A L K+M E+ + G
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 128/262 (48%), Gaps = 2/262 (0%)
Query: 228 DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSV 287
D +G+ ++R+ + N++T+N L+ F R + +M +LG EP + S
Sbjct: 27 DLVISLGEKMQRL-GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 85
Query: 288 LMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
L+ +C +R+ +A L ++M + D + + T+I G + + A M G
Sbjct: 86 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ + VT+ +VNG C+ GD+D A + N M E + +I LC R V +AL
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
++ K K G+ P +Y LI LC G+ +A ++ ++M+ K P+L ++A ID
Sbjct: 206 NLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 468 YMKEGNVEMATMLRKEMFENQV 489
++KEG A L +M + +
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSI 286
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 123/272 (45%), Gaps = 24/272 (8%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATAG 232
++++ + ++S+ + T N LI + K V G E++RE+ GL D
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV-- 361
Query: 233 IGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVF 292
T+ L+ G + +G + + V+ +M G PD +YS+L+
Sbjct: 362 ----------------TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 293 CEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
C ++ +A ++++ M+ ++ D+ Y T+I G C+ G++ + F + L GV+ +
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI-GELCDKRRVFEALDILK 411
VT+ +++G C + A + M G P+ T LI L D + A I +
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 525
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
R + F + S + L+ + +G+++++
Sbjct: 526 MRSCR---FVGDASTIGLVANMLHDGRLDKSF 554
Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%)
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
K + F+ + L ++ + G+ +Y LI C ++ AL + +M+ G+EPS+
Sbjct: 22 KMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIV 81
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
S+ ++GY + A L +M E R +
Sbjct: 82 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 114
>sp|Q9FKR3|PP404_ARATH Pentatricopeptide repeat-containing protein At5g38730
OS=Arabidopsis thaliana GN=At5g38730 PE=2 SV=1
Length = 596
Score = 138 bits (348), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 203/471 (43%), Gaps = 63/471 (13%)
Query: 55 KSRWNHLL------SLCRSGLTPTQFSQIAL-GLKNNPHLALRFFSFTQHKSLCKHSLSS 107
K W ++L L +S +T S+++L P L+ FF +T KHSL S
Sbjct: 23 KGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYGGPSLSWSFFIWTDSLPSSKHSLQS 82
Query: 108 YATIIHILSRARLIGPARDVI-RVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK 166
+I IL++ + A ++ ++A R + P L L ++ + VF L+
Sbjct: 83 SWKMILILTKHKHFKTAHQLLDKLAQRELLSSP-LVLRSLVGGVSEDPEDVSHVFSWLM- 140
Query: 167 CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLD 226
+ I + + + S GL + C L+ + + + + ++I++++ L
Sbjct: 141 --IYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLG 198
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
V N+H +N L+ + G EK E + EM G PD ++Y+
Sbjct: 199 ----------------VVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYN 242
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L++V+C++ EA + + M V ++V YN+ I GF G M A FRE+
Sbjct: 243 TLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-D 301
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
V ++ VT+ L++GYCR D+D A+ + M +GF P T ++ +LC+ R+ EA
Sbjct: 302 DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREA 361
Query: 407 LDIL----------------------------------KARVVKFGLFPTEKSYMFLIKG 432
+L K ++++ GL SY LI G
Sbjct: 362 NRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHG 421
Query: 433 LCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
C+ ++E A + M+ KGF P YS +DG+ + + T L +E
Sbjct: 422 FCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 2/246 (0%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
H F+ LM+ + + G V+ ++ G +P + +VL+ ++R K++++
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M V ++ YN ++ + G+ +AE+ EM GV T+ L++ YC+
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
A+ V + M R G P T I + R+ EA + R +K + +Y
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF--REIKDDVTANHVTYT 311
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
LI G C ++EAL+++ M +GF P + Y++ + ++G + A L EM
Sbjct: 312 TLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK 371
Query: 488 QVRQED 493
++ ++
Sbjct: 372 KIEPDN 377
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 205/427 (48%), Gaps = 43/427 (10%)
Query: 88 ALRFFSFTQHKSLCK-HSLSSYATIIHILSRARLIGPARDVIRVALR------SPEN--- 137
A + F + + K + L S++ +IH+L+ A AR +I+ + P N
Sbjct: 57 AFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSH 116
Query: 138 ----------DPKLKL--FEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVR 185
PK + F +L+ + E G +F+ + E+K + C+ I+
Sbjct: 117 RLFNALEDIQSPKFSIGVFSLLIMEFLEMG----LFEEALWVSREMKCSPDSKACLSILN 172
Query: 186 MLMSRGL--SVKVSTCNALIWEVSRGKGVISGYEIYREVF------GLDSDATAGIGKDV 237
L+ R SV V +++ +G++ IY +F GL S + D
Sbjct: 173 GLVRRRRFDSVWVD------YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLL--DE 224
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
+ ++PNV+ + ++ R+ E+ E ++ M + G P+ Y+YS ++ +C+
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGN 284
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+R+A L++E+ + +VV + T++ GFC+ E+ A F M GV+ + +
Sbjct: 285 VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNC 344
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++G+C++G++ A+ + ++M P+ T +LI LC + +V EA + L ++
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA-NRLFQKMKNE 403
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+FP+ +Y LI G C+E ME+AL + +EM G EP++ +S IDGY +++ A
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 478 TMLRKEM 484
L EM
Sbjct: 464 MGLYFEM 470
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 148/316 (46%), Gaps = 19/316 (6%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
K+E + ++ G+ + T +A+I + V Y +Y+E+
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL----------- 296
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
V + PNV F L+ GF + ++V M + G +P+ Y Y+ L+ C+
Sbjct: 297 -----VAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
M EA L EM N+ DV Y +I G C ++A A F++M + SS T
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSAT 411
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L++GYC+ +++ A+ + ++M G EP T LI C+ R + A+ +
Sbjct: 412 YNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT 471
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+K G+ P +Y LI +E M+EAL++ ++M+ G P+ ++ +DG+ KEG +
Sbjct: 472 IK-GIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL 530
Query: 475 EMATMLRKEMFENQVR 490
+A +E NQ R
Sbjct: 531 SVAIDFYQE--NNQQR 544
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 136/282 (48%), Gaps = 36/282 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN++ +N L+ G + G + + EM L PD ++Y++L+ C E ++ EA
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEAN 394
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+++M+++ + YN++I G+C+ M +A + EM SGVE + +TF L++GY
Sbjct: 395 RLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGY 454
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C D+ +A+ +Y +M KG P+ T LI + + EAL L + +++ G+ P
Sbjct: 455 CNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR-LYSDMLEAGIHPN 513
Query: 423 EKSY-----------------------------------MFLIKGLCEEGKMEEALKVQA 447
+ ++ LI+GLC+ G + A + +
Sbjct: 514 DHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFS 573
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+M G P + Y + + G+++E + ML+ +M + +
Sbjct: 574 DMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 615
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN+ TF+ L+ G+ + ++ EM G PD +Y+ L+ +E M+EA
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEAL 499
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ +M + + + + ++ GF + G ++ A +F++E + V F L+ G
Sbjct: 500 RLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGL 559
Query: 363 CRAGDVDSAILVYNDMCRKGFEPE-GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G + A ++DM G P+ S + +L G L ++R+ + + +L+ ++K G+ P
Sbjct: 560 CQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHL-QEKRITDTM-MLQCDMIKTGILP 617
Query: 422 T 422
Sbjct: 618 N 618
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 170/375 (45%), Gaps = 64/375 (17%)
Query: 160 VFDLLIKCCLEV------------KNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
VFD ++K L + K +I+ C++I R ++ G+ + V + ++ +
Sbjct: 176 VFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLC 235
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
R V ++ +E V ++P +T+N ++ + ++ F VE
Sbjct: 236 RRGEVEKSKKLIKEF----------------SVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDV---------- 317
V M + G + +Y++LM + + +M +AEKL++EMR++ +E DV
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339
Query: 318 -------------------------VAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS 352
Y +I G C++GEM AE EM GV +
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 353 VTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
V F L++GYCR G VD A ++Y+ M +KGF+ + T + +R EA L
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWL-F 458
Query: 413 RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEG 472
R+++ G+ + SY LI C+EG +EEA ++ EM KG +P+ Y+ I Y K+G
Sbjct: 459 RMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Query: 473 NVEMATMLRKEMFEN 487
++ A LR M N
Sbjct: 519 KIKEARKLRANMEAN 533
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 120/240 (50%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +T+ AL+ G + G E + EM G ++ L+ +C + + EA +
Sbjct: 362 PSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMI 421
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ M K + DV NTI F + A+++ M GV+ S+V++ +L++ YC+
Sbjct: 422 YDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCK 481
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G+V+ A ++ +M KG +P T V+I C + ++ EA L+A + G+ P
Sbjct: 482 EGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARK-LRANMEANGMDPDSY 540
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C ++EA+++ +EM KG + + Y+ I G K G + A L EM
Sbjct: 541 TYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 1/216 (0%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
FN L+ G+ R+G ++ ++ M + G + D ++ + + + F +R EA++ M
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+ V+ V+Y +I +C+ G + A+ F EM GV+ +++T+ ++ YC+ G +
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A + +M G +P+ T LI C V EA+ + +K GL +Y +
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLK-GLDQNSVTYTVM 580
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFI 465
I GL + GK +EA + EM KG+ ++Y+A I
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 89/155 (57%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V+ + ++ L+ + +EG E+ + ++VEM+ G +P+ +Y+V++ +C++ +++EA
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEAR 524
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL M ++ D Y ++I G C + A F EMGL G++ +SVT+ +++G
Sbjct: 525 KLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGL 584
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+AG D A +Y++M RKG+ + LIG +
Sbjct: 585 SKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 157/304 (51%), Gaps = 17/304 (5%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
+G+ V T ++LI + G ++ RE+ G + + P+V T
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN----------------IIPDVVT 317
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F+AL+ F +EG + ++++ EM G PD +Y+ L+ FC+E + EA ++++ M
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K E D+V Y+ +I +C+ + FRE+ G+ +++T+ LV G+C++G ++
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
+A ++ +M +G P T +L+ LCD + +AL+I + ++ K + Y +
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE-KMQKSRMTLGIGIYNII 496
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
I G+C K+++A + + KG +P + Y+ I G K+G++ A ML ++M E+
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 490 RQED 493
+D
Sbjct: 557 TPDD 560
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 127/245 (51%), Gaps = 5/245 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ +V ++ ++ ++G+F+ ++ EM G + D +YS L+ C + + +
Sbjct: 240 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 299
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
K+ EM +N+ DVV ++ +I F + G++ A+E + EM G+ ++T+ L++G
Sbjct: 300 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C+ + A +++ M KG EP+ T +LI C +RV + + + + + GL P
Sbjct: 360 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR-EISSKGLIP 418
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y L+ G C+ GK+ A ++ EMV +G PS+ Y +DG G + A
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL--- 475
Query: 482 KEMFE 486
E+FE
Sbjct: 476 -EIFE 479
Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 123/247 (49%), Gaps = 5/247 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ TF+ L+ GF EG + + M + PD + S L+ C + R+ EA L
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + + D V Y ++ C+ G A A + FR+M +++S V + +++ C+
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G D A+ ++N+M KG + + T LIG LC+ + + +L+ + + + P
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVV 316
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI +EGK+ EA ++ EM+ +G P Y++ IDG+ KE + A +M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN----QM 372
Query: 485 FENQVRQ 491
F+ V +
Sbjct: 373 FDLMVSK 379
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 124/258 (48%), Gaps = 3/258 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
S+A A + + V+ ++ RP++ T + L+ G +G + + M G +PD +Y
Sbjct: 157 SEAVALVDRMVE--MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ C+ A L+ +M ++N++ VV Y+ +I C+ G A F EM +
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+++ VT+ L+ G C G D + +M + P+ T LI + ++ EA
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
++ + + G+ P +Y LI G C+E + EA ++ MV KG EP + YS I+
Sbjct: 335 KELYNEMITR-GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 467 GYMKEGNVEMATMLRKEM 484
Y K V+ L +E+
Sbjct: 394 SYCKAKRVDDGMRLFREI 411
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 117/278 (42%), Gaps = 34/278 (12%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P FN L R ++ V M G E D Y+ ++++ +C ++++ A
Sbjct: 65 RPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFA 124
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ E D + ++T++ GFC G ++ A M VT L+NG
Sbjct: 125 FSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLING 184
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI--------LKAR 413
C G V A+++ + M GF+P+ T ++ LC ALD+ +KA
Sbjct: 185 LCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 244
Query: 414 VVKF--------------------------GLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
VV++ G+ +Y LI GLC +GK ++ K+
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
EM+G+ P + +SA ID ++KEG + A L EM
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 51/260 (19%)
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
+++S+G + T + LI + K V G ++RE+ ++ G+ P
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI------SSKGL----------IP 418
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+N L++GF + G ++++ EM G P +Y +L+ C+ + +A +++
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 306 EEMR-----------------------------------DKNVEHDVVAYNTIIGGFCEI 330
E+M+ DK V+ DVV YN +IGG C+
Sbjct: 479 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
G ++ A+ FR+M G T+ L+ + + S++ + +M GF + STI
Sbjct: 539 GSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 598
Query: 391 EVLIGELCDKRRVFEALDIL 410
+++I L D+R LD+L
Sbjct: 599 KMVIDMLSDRRLDKSFLDML 618
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 1/194 (0%)
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
++ +A L+E M + +N + + F + M L+G+E T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
++N YCR + A V + G+EP+ T L+ C + RV EA+ ++ R+V+
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD-RMVE 168
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
P + LI GLC +G++ EAL + MV GF+P Y ++ K GN +
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 477 ATMLRKEMFENQVR 490
A L ++M E ++
Sbjct: 229 ALDLFRKMEERNIK 242
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 185/388 (47%), Gaps = 44/388 (11%)
Query: 122 GPARDVIRVALRSPEN--DPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEK--- 176
G + + + R EN P + + +V G DLL K +E +N++
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK--MEERNVKADVF 229
Query: 177 --------------IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREV 222
I+ + + + + ++G+ V T N+L+ + + G + +++
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
V R + PNV TFN L+ F +EG ++ +++ EM G P+
Sbjct: 290 --------------VSR--EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
+Y+ LM +C + R+ EA + + M D+V + ++I G+C + + + FR
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
+ G+ +++VT+ LV G+C++G + A ++ +M G P+ T +L+ LCD +
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 403 VFEALDI---LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
+ +AL+I L+ + G+ Y +I+G+C+ GK+E+A + + KG +P++
Sbjct: 454 LEKALEIFEDLQKSKMDLGIV----MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFEN 487
Y+ I G K+G++ A +L ++M E+
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEED 537
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 1/224 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ TFN L+ G + EG + + M GC+PD +Y+ ++ C A L
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+M ++NV+ DV Y+TII C G + A F+EM G++SS VT+ LV G C+
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
AG + L+ DM + P T VL+ + ++ EA ++ K + + G+ P
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNII 334
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+Y L+ G C + ++ EA + MV P + +++ I GY
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 79/150 (52%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
N T++ L+ GF + G + E+++ EM G PD +Y +L+ C+ ++ +A ++
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+E+++ ++ +V Y TII G C+ G++ A F + GV+ + +T+ +++G C+
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
G + A ++ M G P T LI
Sbjct: 521 KGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 97/224 (43%), Gaps = 7/224 (3%)
Query: 269 VWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFC 328
++ EM R P +S + ++ +++ + H++ N +I FC
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 329 EIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGS 388
+ A ++ G E + TF L+ G G V A+++ + M G +P+
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194
Query: 389 TIEVLIGELCDKRRVFEALDILKA---RVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
T ++ +C ALD+L+ R VK +F +Y +I LC +G ++ A+ +
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF----TYSTIIDSLCRDGCIDAAISL 250
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
EM KG + S+ Y++ + G K G +L K+M ++
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 78/155 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+ L+ G G EK +++ ++ + + Y+ ++ C+ ++ +A
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L+ + K V+ +V+ Y +I G C+ G ++ A R+M G + T+ L+ +
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
R GD+ ++ + +M GF + S+I+++I L
Sbjct: 554 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 9/161 (5%)
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK----GFEPEGSTIE 391
A F+EM S S V F + R + + D C++ G T+
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVL----DFCKQLELNGIAHNIYTLN 127
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
++I C + A +L +V+K G P ++ LIKGL EGK+ EA+ + MV
Sbjct: 128 IMINCFCRCCKTCFAYSVL-GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
G +P + Y++ ++G + G+ +A L ++M E V+ +
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 154/319 (48%), Gaps = 17/319 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+++ V+++ +++R S T N LI + + V E+ R + + GI
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL------TSKGI-- 396
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
P+V TFN+L+ G +++ EM GCEPD ++Y++L+ C +
Sbjct: 397 --------LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
++ EA + ++M V+ YNT+I GFC+ + AEE F EM + GV +SVT+
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
L++G C++ V+ A + + M +G +P+ T L+ C + +A DI++A +
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA-MT 567
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
G P +Y LI GLC+ G++E A K+ + KG + Y+ I G ++
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTT 627
Query: 476 MATMLRKEMFENQVRQEDG 494
A L +EM E D
Sbjct: 628 EAINLFREMLEQNEAPPDA 646
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 122/240 (50%), Gaps = 1/240 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +TFN L+ G + G + ++ M + G +PD Y+Y+ +++ C+ ++EA ++
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M ++ + V YNT+I C+ ++ A E R + G+ TF L+ G C
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ A+ ++ +M KG EP+ T +LI LC K ++ EAL++LK + G +
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCARSVI 471
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y LI G C+ K EA ++ EM G + Y+ IDG K VE A L +M
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 144/314 (45%), Gaps = 21/314 (6%)
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREV--FGLDSD----ATAGIG----KDVKRV 240
G+ VST N LI + R + + ++ +GL D T G D+
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 241 VRVRPNVHTF---------NALMVGFYREGAFEKVEDVWVEMARL-GCEPDCYSYSVLMA 290
+R+R + F N ++ GF +EG E + EM+ G PD Y+++ L+
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C+ ++ A ++ + M + + DV YN++I G C++GE+ A E +M
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDIL 410
++VT+ L++ C+ V+ A + + KG P+ T LI LC R A+++
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 411 KARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMK 470
+ K G P E +Y LI LC +GK++EAL + +M G S+ Y+ IDG+ K
Sbjct: 424 EEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 471 EGNVEMATMLRKEM 484
A + EM
Sbjct: 483 ANKTREAEEIFDEM 496
Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 165/357 (46%), Gaps = 29/357 (8%)
Query: 152 RECGSAPFVFDLLIKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGK 210
R+C ++ LI C E ++E ++ R+L S+G+ V T N+LI + +
Sbjct: 359 RDCSPNTVTYNTLISTLCKE----NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 211 GVISGYEIYREV-----------FGLDSDATAGIGKDVKRVVRVRP--------NVHTFN 251
E++ E+ + + D+ GK + + ++ +V T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 252 ALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDK 311
L+ GF + + E+++ EM G + +Y+ L+ C+ RR+ +A +L ++M +
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 312 NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA 371
+ D YN+++ FC G++ +A + + M +G E VT+ L++G C+AG V+ A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 372 ILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIK 431
+ + KG +I L KR+ EA+++ + + + P SY + +
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 432 GLCE-EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY----MKEGNVEMATMLRKE 483
GLC G + EA+ E++ KGF P +G M+E V++ M+ ++
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQK 711
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 124/241 (51%), Gaps = 2/241 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+ H +N ++ + + VE +M+ G +PD +++VL+ C ++R A
Sbjct: 150 LKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAI 209
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ E+M + D + T++ G+ E G++ A +M G S+V+ +V+G+
Sbjct: 210 LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 363 CRAGDVDSAILVYNDMCRK-GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G V+ A+ +M + GF P+ T L+ LC V A++I+ +++ G P
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV-MLQEGYDP 328
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y +I GLC+ G+++EA++V +M+ + P+ Y+ I KE VE AT L
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 482 K 482
+
Sbjct: 389 R 389
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 106/215 (49%), Gaps = 1/215 (0%)
Query: 270 WVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCE 329
W+ + G +PD + Y+ ++ + + ++ E +M ++ DV +N +I C
Sbjct: 143 WM-IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCR 201
Query: 330 IGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGST 389
++ A +M G+ TF ++ GY GD+D A+ + M G +
Sbjct: 202 AHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVS 261
Query: 390 IEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEM 449
+ V++ C + RV +AL+ ++ + G FP + ++ L+ GLC+ G ++ A+++ M
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321
Query: 450 VGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+ +G++P + Y++ I G K G V+ A + +M
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 82/179 (45%), Gaps = 2/179 (1%)
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ N + Y I+ G ++ +M S E + TF L+ Y +
Sbjct: 75 KKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ 134
Query: 369 DSAILVYNDMCRK-GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
D + V + M + G +P+ ++ L D + + ++I A++ +G+ P ++
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSL-KLVEISHAKMSVWGIKPDVSTFN 193
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LIK LC ++ A+ + +M G P + ++ + GY++EG+++ A +R++M E
Sbjct: 194 VLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVE 252
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 124/251 (49%), Gaps = 4/251 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAVFCEERRMREA 301
+ P+V TFN+L+ + G D++ EM R G PD Y+++ L+ FC+ + EA
Sbjct: 169 ISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEA 228
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM--GLSGVESSSVTFEHLV 359
+++++M + DVV YNTII G C G++ A M + V + V++ LV
Sbjct: 229 FRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLV 288
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
GYC ++D A+LV++DM +G +P T LI L + R E DIL F
Sbjct: 289 RGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTT 348
Query: 420 F-PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
F P ++ LIK C+ G ++ A+KV EM+ P YS I + A
Sbjct: 349 FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAE 408
Query: 479 MLRKEMFENQV 489
L E+FE +V
Sbjct: 409 TLFNELFEKEV 419
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 196/452 (43%), Gaps = 73/452 (16%)
Query: 85 PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKL--K 142
P LRFF + +K H S+ ++ L RAR + AR+ + R KL +
Sbjct: 81 PADGLRFFDWVSNKGF-SHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDR 139
Query: 143 LFEVLVKTYRECGSAPFVFDLLIKCCLEVKNI---EKIETCVDIVRMLMSRGLSVKVSTC 199
F L+++Y G +F +K +K + + T ++ +L+ RG +
Sbjct: 140 YFNSLIRSYGNAG----LFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRG---RTGMA 192
Query: 200 NALIWEVSRGKGVISGYEIYREV---FGLDS--DATAGIGKDVKRVVRVRPNVHTFNALM 254
+ L E+ R GV + + F +S D I KD++ + P+V T+N ++
Sbjct: 193 HDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDME-LYHCNPDVVTYNTII 251
Query: 255 VGFYREGAFEKVEDVWVEMARLGCE--PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKN 312
G R G + +V M + + P+ SY+ L+ +C ++ + EA ++ +M +
Sbjct: 252 DGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRG 311
Query: 313 VEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES------SSVTFEHLVNGYCRAG 366
++ + V YNT+I G + E R +E +++ + G ++ + TF L+ +C AG
Sbjct: 312 LKPNAVTYNTLIKG---LSEAHRYDEI-KDILIGGNDAFTTFAPDACTFNILIKAHCDAG 367
Query: 367 DVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR------------------------ 402
+D+A+ V+ +M P+ ++ VLI LC +
Sbjct: 368 HLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECK 427
Query: 403 --------VFEAL---------DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
+FE L + + +++K G+ SY LI G C EGK + A ++
Sbjct: 428 PLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFKPAYEL 486
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
M+ + F P LE Y IDG +K G +A
Sbjct: 487 LVLMLRREFVPDLETYELLIDGLLKIGEALLA 518
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 91/490 (18%), Positives = 175/490 (35%), Gaps = 138/490 (28%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEN-DPKLKLFEVLVKTYRECGSAPF 159
C + +Y TII L RA + A +V+ L+ + P + + LV+ Y
Sbjct: 240 CNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGY-------- 291
Query: 160 VFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRG------KGVI 213
C++ ++I+ V + ++SRGL T N LI +S K ++
Sbjct: 292 --------CMK----QEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL 339
Query: 214 SGYEIYREVFGLDS----------------DATAGIGKDVKRVVRVRPNVHTFNALMVGF 257
G F D+ DA + +++ + ++ P+ +++ L+
Sbjct: 340 IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNM-KLHPDSASYSVLIRTL 398
Query: 258 YREGAFEKVEDVWVEM----ARLG---CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
F++ E ++ E+ LG C+P +Y+ + C + ++AEK++ ++
Sbjct: 399 CMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMK 458
Query: 311 KNVEH----------------------------------DVVAYNTIIGGFCEIGEMARA 336
+ V+ D+ Y +I G +IGE A
Sbjct: 459 RGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLA 518
Query: 337 EEFFREMGLSGVESSSVTFEHLV----------NGYC----------------------- 363
+ + M S + TF ++ +C
Sbjct: 519 HDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRL 578
Query: 364 --RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ + A L+ + G+ + +E L+G LC+ R++ +A ++ LF
Sbjct: 579 LFSSAQKEKAFLIVRLLYDNGYLVK---MEELLGYLCENRKLLDAHTLV--------LFC 627
Query: 422 TEKSYMF-------LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
EKS M +I+GLC+ + EA + E+V G L + + G
Sbjct: 628 LEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKW 687
Query: 475 EMATMLRKEM 484
E + K M
Sbjct: 688 EELQFVSKRM 697
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 151/298 (50%), Gaps = 17/298 (5%)
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
+G++ + T N LI G ++ R++ +KR ++ PNV T
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDM--------------IKR--KINPNVVT 335
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
F+ L+ F +EG + E++ EM G PD +Y+ L+ FC+E + +A ++ + M
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + ++ +N +I G+C+ + E FR+M L GV + +VT+ L+ G+C G ++
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
A ++ +M + P T ++L+ LCD +AL+I + ++ K + Y +
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE-KIEKSKMELDIGIYNII 514
Query: 430 IKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFEN 487
I G+C K+++A + + KG +P ++ Y+ I G K+G + A +L ++M E+
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 3/250 (1%)
Query: 237 VKRVVRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
V R+V + +P++ T N L+ G G + + +M GC+P+ +Y ++ V C+
Sbjct: 181 VDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 240
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ A +L +M ++N++ D V Y+ II G C+ G + A F EM + G+ ++ +T
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 300
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ G+C AG D + DM ++ P T VLI + ++ EA ++ K +
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK-EM 359
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+ G+ P +Y LI G C+E +++A ++ MV KG +P++ ++ I+GY K +
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 475 EMATMLRKEM 484
+ L ++M
Sbjct: 420 DDGLELFRKM 429
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 134/242 (55%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+ +L+ GF +E +K + M GC+P+ ++++L+ +C+ R+ +
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 423
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ +M + V D V YNT+I GFCE+G++ A+E F+EM V + VT++ L++G
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G+ + A+ ++ + + E + ++I +C+ +V +A D+ + +K G+ P
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPG 542
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
K+Y +I GLC++G + EA + +M G P Y+ I ++ +G+ + L +
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602
Query: 483 EM 484
E+
Sbjct: 603 EL 604
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 129/252 (51%), Gaps = 3/252 (1%)
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
A + +GK +K + PN TF+ L+ G EG + ++ M +G +PD + + L
Sbjct: 142 AFSAMGKIIK--LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 199
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ C + EA L ++M + + + V Y ++ C+ G+ A A E R+M +
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALD 408
+ +V + +++G C+ G +D+A ++N+M KG T +LIG C+ R +
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 409 ILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY 468
+L+ ++K + P ++ LI +EGK+ EA ++ EM+ +G P Y++ IDG+
Sbjct: 320 LLR-DMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 469 MKEGNVEMATML 480
KE +++ A +
Sbjct: 379 CKENHLDKANQM 390
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 124/244 (50%), Gaps = 5/244 (2%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ + ++ ++ G + G+ + +++ EM G + +Y++L+ FC R +
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL +M + + +VV ++ +I F + G++ AEE +EM G+ ++T+ L++G+
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ +D A + + M KG +P T +LI C R+ + L++ + ++ G+
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR-GVVAD 437
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI+G CE GK+ A ++ EMV + P++ Y +DG G E A
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL---- 493
Query: 483 EMFE 486
E+FE
Sbjct: 494 EIFE 497
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 118/244 (48%), Gaps = 1/244 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N++T + ++ F R ++ +LG EP+ ++S L+ C E R+ EA +L
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+ M + + D++ NT++ G C G+ A A +M G + ++VT+ ++N C++
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G A+ + M + + + ++I LC + A ++ +K G+ +
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK-GITTNIIT 300
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMF 485
Y LI G C G+ ++ K+ +M+ + P++ +S ID ++KEG + A L KEM
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 486 ENQV 489
+
Sbjct: 361 HRGI 364
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 138/315 (43%), Gaps = 15/315 (4%)
Query: 185 RMLMSRGLSVKVSTC-NALIWEVSRGKGVISGYEI-YRE-----VFGLDSDATAGIGKDV 237
R+L + L + + C N L + RG S + YRE + + +D + +D+
Sbjct: 20 RLLETGTLRIALINCPNELSFCCERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDM 79
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
R P V F+ L + ++ V + +M G + Y+ S+++ FC R+
Sbjct: 80 IHS-RPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRK 138
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A ++ E + + ++T+I G C G ++ A E M G + +T
Sbjct: 139 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 198
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA---RV 414
LVNG C +G A+L+ + M G +P T ++ +C + A+++L+ R
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+K Y +I GLC+ G ++ A + EM KG ++ Y+ I G+ G
Sbjct: 259 IKLDAV----KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 475 EMATMLRKEMFENQV 489
+ L ++M + ++
Sbjct: 315 DDGAKLLRDMIKRKI 329
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 142/313 (45%), Gaps = 24/313 (7%)
Query: 119 RLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKCCLEVKNIEK 176
R I P V + S + KL+ E L K G AP + LI + +++K
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVF--GLDSDATA--- 231
VD +++S+G + T N LI + + G E++R++ G+ +D
Sbjct: 387 ANQMVD---LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 232 -----------GIGKDVKRVV---RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLG 277
+ K++ + + +V PN+ T+ L+ G G EK +++ ++ +
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 278 CEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAE 337
E D Y++++ C ++ +A L+ + K V+ V YN +IGG C+ G ++ AE
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
FR+M G T+ L+ + GD ++ + ++ R GF + STI+++I L
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Query: 398 CDKRRVFEALDIL 410
D R LD+L
Sbjct: 624 SDGRLKKSFLDML 636
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
++M L G+ + T ++N +CR + A + + G+EP T LI LC +
Sbjct: 112 KQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLE 171
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
RV EAL+++ R+V+ G P + L+ GLC GK EA+ + +MV G +P+
Sbjct: 172 GRVSEALELVD-RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 230
Query: 461 YSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
Y ++ K G +A L ++M E ++ +
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLD 262
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 132 bits (331), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 214/495 (43%), Gaps = 69/495 (13%)
Query: 28 TSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHL 87
T S PP +A + L+ K W+ L + + + P + + + + +P L
Sbjct: 33 TGSPCPPRYD----VAVIADLI----EKQHWSKL-GVHVTDINPNELFRQLISSELDPDL 83
Query: 88 ALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVL 147
LR++S+ S SL ++H L+ A+ R + +R+ + +F +
Sbjct: 84 CLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAI 143
Query: 148 VKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVS 207
C ++ + D+L+ L N + E + + G + +C L+ +
Sbjct: 144 SMCDNVCVNS-IIADMLV---LAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALL 199
Query: 208 RGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVE 267
+ +Y+E+ ++R +++PNV TFN ++ + G K
Sbjct: 200 KENRSADVEYVYKEM--------------IRR--KIQPNVFTFNVVINALCKTGKMNKAR 243
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCE---ERRMREAE---------------------- 302
DV +M GC P+ SY+ L+ +C+ +M +A+
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303
Query: 303 -------------KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVE 349
K+++EM D++V+ +V++YN++I G C G+++ A +M +GV+
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363
Query: 350 SSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI 409
+ +T+ L+NG+C+ + A+ ++ + +G P +LI C ++ +
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF-A 422
Query: 410 LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
LK + + G+ P +Y LI GLC G +E A K+ ++ KG P L + ++GY
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYC 481
Query: 470 KEGNVEMATMLRKEM 484
++G A ML KEM
Sbjct: 482 RKGESRKAAMLLKEM 496
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 123/242 (50%), Gaps = 2/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V PN+ TFN L+ GF+++ V+ EM +P+ SY+ L+ C ++ EA
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ ++M V+ +++ YN +I GFC+ + A + F + G ++ + L++ Y
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G +D + +M R+G P+ T LI LC + EA L ++ GL P
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI-EAAKKLFDQLTSKGL-PD 469
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
++ L++G C +G+ +A + EM G +P Y+ + GY KEGN++ AT +R
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRT 529
Query: 483 EM 484
+M
Sbjct: 530 QM 531
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 160/363 (44%), Gaps = 39/363 (10%)
Query: 101 CKHSLSSYATIIHILSRARLIGPARDVIRVALRSPEND--PKLKLFEVLVKTYRECGSAP 158
C ++ SY T+I + G V END P L F +L+ + + + P
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEI 218
+ + + ++ + + V + N+LI G+ +G +I
Sbjct: 314 --------------------GSMKVFKEMLDQDVKPNVISYNSLI------NGLCNGGKI 347
Query: 219 YREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGC 278
+ D +AG V+PN+ T+NAL+ GF + ++ D++ + G
Sbjct: 348 SEAISMRDKMVSAG----------VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 279 EPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEE 338
P Y++L+ +C+ ++ + L EEM + + DV YN +I G C G + A++
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 339 FFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC 398
F ++ G+ VTF L+ GYCR G+ A ++ +M + G +P T +++ C
Sbjct: 458 LFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 399 DKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSL 458
+ + A ++ + L SY L++G ++GK+E+A + EM+ KG P+
Sbjct: 517 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576
Query: 459 EIY 461
Y
Sbjct: 577 ITY 579
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
E F+ G G + S+++ + L+ + VY +M R+ +P T V+I L
Sbjct: 174 EAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINAL 233
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE---EGKMEEALKVQAEMVGKGF 454
C ++ +A D+++ V +G P SY LI G C+ GKM +A V EMV
Sbjct: 234 CKTGKMNKARDVMEDMKV-YGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDV 292
Query: 455 EPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
P+L ++ IDG+ K+ N+ + + KEM + V+
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 135/249 (54%), Gaps = 8/249 (3%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++P+V T+N L+ G + + +M PD ++ L+ F +E ++ EAE
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 303 KLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KL++EM + K+ DVVAYNT+I GFC+ + E FREM G+ ++VT+ L++G
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL---DILKARVVKFG 418
+ +A D D+A +V+ M G P+ T +L+ LC+ V AL + ++ R +K
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ +Y +I+ LC+ GK+E+ + + KG +P++ Y+ + G+ ++G E A
Sbjct: 461 IV----TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 479 MLRKEMFEN 487
L EM E+
Sbjct: 517 ALFVEMKED 525
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 113/249 (45%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+P+ TF L+ G ++ + + M GC+PD +Y ++ C+ A
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +M +E DVV YNTII G C+ M A + F +M G++ T+ L++ C
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
G A + +DM K P+ LI + ++ EA + V FP
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y LIKG C+ ++EE ++V EM +G + Y+ I G+ + + + A M+ K+
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 484 MFENQVRQE 492
M + V +
Sbjct: 417 MVSDGVHPD 425
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 119/246 (48%), Gaps = 1/246 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ N++T++ + F R + +M +LG P + + L+ FC R+ EA
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
L ++M + + D V + T++ G + + + A M + G + VT+ ++NG
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ G+ D A+ + N M + E + +I LC + + +A D+ K G+ P
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK-GIKPD 284
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
+Y LI LC G+ +A ++ ++M+ K P L ++A ID ++KEG + A L
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 483 EMFENQ 488
EM +++
Sbjct: 345 EMVKSK 350
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 20/259 (7%)
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
M+ S+ V N LI + K V G E++RE + G
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE---MSQRGLVG------------- 389
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+ L+ GF++ + + V+ +M G PD +Y++L+ C + A ++
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E M+ ++++ D+V Y T+I C+ G++ + F + L GV+ + VT+ +++G+CR
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 509
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLI-GELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A ++ +M G P T LI L D A I + R F +
Sbjct: 510 GLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFA---GDA 566
Query: 425 SYMFLIKGLCEEGKMEEAL 443
S L+ + +G+++++
Sbjct: 567 STFGLVTNMLHDGRLDKSF 585
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 20/269 (7%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNA 201
KL++ +VK+ + C ++ LIK + K ++E +++ R + RGL T
Sbjct: 341 KLYDEMVKS-KHCFPDVVAYNTLIKGFCKYK---RVEEGMEVFREMSQRGLVGNTVTYTT 396
Query: 202 LIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
LI + + + +++++ SD V P++ T+N L+ G G
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMV---SDG-------------VHPDIMTYNILLDGLCNNG 440
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
E V+ M + + D +Y+ ++ C+ ++ + L+ + K V+ +VV Y
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
T++ GFC G A+ F EM G +S T+ L+ R GD ++ + +M
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSC 560
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDIL 410
GF + ST ++ L D R LD+L
Sbjct: 561 GFAGDASTFGLVTNMLHDGRLDKSFLDML 589
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 162/321 (50%), Gaps = 26/321 (8%)
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
+E VD+ + ++G+ V T N+LI + +G SDA+ +
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCN--------------YGRWSDASRLLSNM 319
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
+++ ++ PNV TFNAL+ F++EG + E + EM + +PD +Y++L+ FC
Sbjct: 320 LEK--KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
R+ EA+++++ M K+ ++ YNT+I GFC+ + E FREM G+ ++VT+
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKAR 413
++ G+ +AGD DSA +V+ M + T +L+ LC ++ AL I L+
Sbjct: 438 TIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS 497
Query: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
++ +F Y +I+G+C+ GK+ EA + + +P + Y+ I G +
Sbjct: 498 EMELNIFI----YNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRL 550
Query: 474 VEMATMLRKEMFENQVRQEDG 494
++ A L ++M E+ G
Sbjct: 551 LQEADDLFRKMKEDGTLPNSG 571
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 123/258 (47%), Gaps = 3/258 (1%)
Query: 227 SDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
SDA A + + V+ + +P+ TF L+ G + + + +M + GC+PD +Y
Sbjct: 170 SDAVALVDQMVE--MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
++ C+ + A L +M ++ +VV +NTII C+ + A + F EM
Sbjct: 228 TVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
G+ + VT+ L+N C G A + ++M K P T LI + ++ EA
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+ L +++ + P +Y LI G C +++EA ++ MV K P+++ Y+ I+
Sbjct: 348 -EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Query: 467 GYMKEGNVEMATMLRKEM 484
G+ K VE L +EM
Sbjct: 407 GFCKCKRVEDGVELFREM 424
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 139/330 (42%), Gaps = 43/330 (13%)
Query: 199 CNALIWEVSRGKGVISGYEIYR----EVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALM 254
C + WE S EI R ++ +D DA G VK R P++ FN L+
Sbjct: 34 CGSGCWERSFASASGDYREILRNRLSDIIKVD-DAVDLFGDMVKS--RPFPSIVEFNKLL 90
Query: 255 VGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVE 314
+ FE V + +M LG D Y+YS+ + FC ++ A + +M E
Sbjct: 91 SAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYE 150
Query: 315 HDVVAYNTIIGGFC-------------EIGEMARAEEFFR-------------------- 341
D+V ++++ G+C ++ EM + F
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 342 --EMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCD 399
+M G + VT+ +VNG C+ GD+D A+ + N M + +I LC
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 400 KRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLE 459
R V A+D+ K G+ P +Y LI LC G+ +A ++ + M+ K P++
Sbjct: 271 YRHVEVAVDLFTEMETK-GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 460 IYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
++A ID + KEG + A L +EM + +
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 1/243 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R++ NV FN ++ + E D++ EM G P+ +Y+ L+ C R +A
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA 312
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L M +K + +VV +N +I F + G++ AE+ EM ++ ++T+ L+NG
Sbjct: 313 SRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C +D A ++ M K P T LI C +RV + +++ + + + GL
Sbjct: 373 FCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR-EMSQRGLVG 431
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y +I+G + G + A V +MV + YS + G G ++ A ++
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Query: 482 KEM 484
K +
Sbjct: 492 KYL 494
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 123/248 (49%), Gaps = 5/248 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T ++L+ G+ + +M +G +PD ++++ L+ + EA L
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++M + + D+V Y T++ G C+ G++ A +M + ++++ V F +++ C+
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
V+ A+ ++ +M KG P T LI LC+ R +A +L + K + P
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVV 329
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
++ LI +EGK+ EA K+ EM+ + +P Y+ I+G+ ++ A K+M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA----KQM 385
Query: 485 FENQVRQE 492
F+ V ++
Sbjct: 386 FKFMVSKD 393
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 123/281 (43%), Gaps = 31/281 (11%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
KL E +++ R ++LLI C+ +++ + + ++S+ + T N
Sbjct: 349 KLHEEMIQ--RSIDPDTITYNLLINGFCMH----NRLDEAKQMFKFMVSKDCLPNIQTYN 402
Query: 201 ALIWEVSRGKGVISGYEIYREVF--GL------------------DSDATAGIGKDVKRV 240
LI + K V G E++RE+ GL D D+ + K +
Sbjct: 403 TLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN 462
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
RV ++ T++ L+ G G + ++ + + E + + Y+ ++ C+ ++ E
Sbjct: 463 -RVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A W+ +++ DVV YNT+I G C + A++ FR+M G +S T+ L+
Sbjct: 522 A---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKR 401
R D ++ + +M GF + STI ++ L D R
Sbjct: 579 ANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGR 619
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 143/260 (55%), Gaps = 4/260 (1%)
Query: 228 DATAGIGKD-VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYS 286
D A + +D +KR ++ PNV TF+ L+ F +EG + + + EM + G P+ +Y+
Sbjct: 315 DDGAKLLRDMIKR--KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 287 VLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLS 346
L+ FC+E R+ EA ++ + M K + D++ +N +I G+C+ + E FREM L
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432
Query: 347 GVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEA 406
GV +++VT+ LV G+C++G ++ A ++ +M + P+ + ++L+ LCD + +A
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L+I ++ K + YM +I G+C K+++A + + KG + Y+ I
Sbjct: 493 LEIF-GKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 467 GYMKEGNVEMATMLRKEMFE 486
++ ++ A +L ++M E
Sbjct: 552 ELCRKDSLSKADILFRKMTE 571
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 133/253 (52%), Gaps = 9/253 (3%)
Query: 237 VKRVVRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARL---GCEPDCYSYSVLMAV 291
V R+V + +P + T N L+ G G KV D V + R+ G +P+ +Y ++ V
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNG---KVSDAVVLIDRMVETGFQPNEVTYGPVLNV 237
Query: 292 FCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESS 351
C+ + A +L +M ++N++ D V Y+ II G C+ G + A F EM + G ++
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
Query: 352 SVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILK 411
+T+ L+ G+C AG D + DM ++ P T VLI + ++ EA +LK
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+++ G+ P +Y LI G C+E ++EEA+++ M+ KG +P + ++ I+GY K
Sbjct: 358 -EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 472 GNVEMATMLRKEM 484
++ L +EM
Sbjct: 417 NRIDDGLELFREM 429
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 125/235 (53%), Gaps = 1/235 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
++ + ++ ++ G ++G+ + +++ EM G + D +Y+ L+ FC R +
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL +M + + +VV ++ +I F + G++ A++ +EM G+ +++T+ L++G+
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+ ++ AI + + M KG +P+ T +LI C R+ + L++ + ++ G+
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR-GVIAN 437
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y L++G C+ GK+E A K+ EMV + P + Y +DG G +E A
Sbjct: 438 TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 118/234 (50%), Gaps = 1/234 (0%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+ ++ T+N L+ GF G ++ + +M + P+ ++SVL+ F +E ++REA++
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
L +EM + + + + YN++I GFC+ + A + M G + +TF L+NGYC
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
+A +D + ++ +M +G T L+ C ++ E L +V + P
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL-EVAKKLFQEMVSRRVRPDI 473
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
SY L+ GLC+ G++E+AL++ ++ E + IY I G V+ A
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA 527
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 143/315 (45%), Gaps = 15/315 (4%)
Query: 185 RMLMSRGLSVKVSTC-NALIWEVSRGKGVISGYEI-YRE-----VFGLDSDATAGIGKDV 237
R+L + L + + C N L++ RG S + YR+ + G+ +D + +D+
Sbjct: 20 RLLETGTLRIALINCPNELLFCCERGFSTFSDRNLSYRDKLSSGLVGIKADDAVDLFRDM 79
Query: 238 KRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
+ R P V FN L + +E V + +M G Y+ S+++ FC R+
Sbjct: 80 IQS-RPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRK 138
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A ++ E D V +NT++ G C ++ A E M G + + +T
Sbjct: 139 LSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNT 198
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKA---RV 414
LVNG C G V A+++ + M GF+P T ++ +C + A+++L+ R
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
+K Y +I GLC++G ++ A + EM KGF+ + Y+ I G+ G
Sbjct: 259 IKLDAV----KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 475 EMATMLRKEMFENQV 489
+ L ++M + ++
Sbjct: 315 DDGAKLLRDMIKRKI 329
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 114/222 (51%), Gaps = 1/222 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ TFN L+ G+ + + +++ EM+ G + +Y+ L+ FC+ ++ A+KL
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++EM + V D+V+Y ++ G C+ GE+ +A E F ++ S +E + +++G C
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
A VD A ++ + KG + + ++I ELC K + +A DIL ++ + G P E
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKA-DILFRKMTEEGHAPDEL 579
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
+Y LI+ + A ++ EM GF + I+
Sbjct: 580 TYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 146/327 (44%), Gaps = 25/327 (7%)
Query: 119 RLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAP--FVFDLLIKC-CLEVKNIE 175
R I P V + S + KL+ + L+K + G AP ++ LI C E
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE----N 382
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
++E + +V +++S+G + T N LI + + G E++RE+
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM------------- 429
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ V N T+N L+ GF + G E + ++ EM PD SY +L+ C+
Sbjct: 430 ---SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ +A +++ ++ +E D+ Y II G C ++ A + F + L GV+ + +
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
+++ CR + A +++ M +G P+ T +LI A ++++ +
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEE--M 604
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEA 442
K FP + S + ++ + G+++++
Sbjct: 605 KSSGFPADVSTVKMVINMLSSGELDKS 631
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A L+ +M V+ +N + + + ++M G+ S T ++
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
N +CR + A + + G+EP+ L+ LC + RV EAL+++ R+V+ G
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVD-RMVEMGH 189
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
PT + L+ GLC GK+ +A+ + MV GF+P+ Y ++ K G +A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 480 LRKEMFENQVRQE 492
L ++M E ++ +
Sbjct: 250 LLRKMEERNIKLD 262
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 201/459 (43%), Gaps = 48/459 (10%)
Query: 67 SGLTPTQFSQIALGL----KNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIG 122
+GL P F+ +L + + + A + F+ K C+ + +Y +IH L AR I
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG-CRRNEVAYTHLIHGLCVARRID 305
Query: 123 PARDVIRVALRSPENDPKLKLFEVLVKTY----------------RECGSAPFV--FDLL 164
A D+ V ++ E P ++ + VL+K+ E G P + + +L
Sbjct: 306 EAMDLF-VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 165 IKC-CLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI---------------WEVSR 208
I C + K E +++ ++ +GL V T NALI E+
Sbjct: 365 IDSLCSQCK----FEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 209 GKGVISGYEIYREVFG--LDSDATAGIGKDVKRVVR-VRPNVHTFNALMVGFYREGAFEK 265
+ + Y E+ S+ +G K + R V P+V T+N+L+ G R G F+
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 266 VEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIG 325
+ M G PD ++Y+ ++ C+ +R+ EA L++ + K V +VV Y +I
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 326 GFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEP 385
G+C+ G++ A +M +S+TF L++G C G + A L+ M + G +P
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 386 EGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKV 445
ST +LI L A + +++ G P +Y I+ C EG++ +A +
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQ-QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 446 QAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
A+M G P L YS+ I GY G A + K M
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 217/493 (44%), Gaps = 58/493 (11%)
Query: 2 AVQILKHIIFSVSKPKPKPQLLSQFSTSSS---TPPSDQSHNLIATVVSLLTHHRSKSRW 58
A ++LK FS P P QF + S P ++S ++ +V L SK W
Sbjct: 19 AFEVLKKK-FSTDVTVPSPVTRRQFCSVSPLLRNLPEEESDSM--SVPHRLLSILSKPNW 75
Query: 59 NHLLSLCR--SGLTPTQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILS 116
+ SL S ++P+ S + L +P AL F + KHS+ SYA+++ +L
Sbjct: 76 HKSPSLKSMVSAISPSHVSSL-FSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLI 134
Query: 117 RARLIGPARDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEK 176
+G V ++ L +++K+ G A +V DL C ++ E+
Sbjct: 135 NNGYVGV---VFKIRL-------------LMIKSCDSVGDALYVLDL----CRKMNKDER 174
Query: 177 IETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKD 236
E ++ + N L+ ++R V ++Y E+ +D
Sbjct: 175 FELKYKLI-----------IGCYNTLLNSLARFGLVDEMKQVYMEML-----------ED 212
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEER 296
+V PN++T+N ++ G+ + G E+ ++ G +PD ++Y+ L+ +C+ +
Sbjct: 213 -----KVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 297 RMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFE 356
+ A K++ EM K + VAY +I G C + A + F +M + T+
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327
Query: 357 HLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK 416
L+ C + A+ + +M G +P T VLI LC + + +A ++L ++++
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL-GQMLE 386
Query: 417 FGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEM 476
GL P +Y LI G C+ G +E+A+ V M + P+ Y+ I GY K NV
Sbjct: 387 KGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHK 445
Query: 477 ATMLRKEMFENQV 489
A + +M E +V
Sbjct: 446 AMGVLNKMLERKV 458
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 18/264 (6%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ ++P V T L+ ++G F+ + +M G +PD ++Y+ + +C E R+ +
Sbjct: 596 IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD 655
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
AE + +MR+ V D+ Y+++I G+ ++G+ A + + M +G E S TF L+
Sbjct: 656 AEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
Query: 361 G---------------YCRAGDV---DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
C ++ D+ + + M P + E LI +C+
Sbjct: 716 HLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGN 775
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ A + G+ P+E + L+ C+ K EA KV +M+ G P LE
Sbjct: 776 LRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCK 835
Query: 463 AFIDGYMKEGNVEMATMLRKEMFE 486
I G K+G E T + + + +
Sbjct: 836 VLICGLYKKGEKERGTSVFQNLLQ 859
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 18/239 (7%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN TFNAL+ G +G ++ + +M ++G +P + ++L+ ++ A
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++M + D Y T I +C G + AE+ +M +GV T+ L+ GY
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIG---------------ELCDKRRV--FEAL 407
G + A V M G EP T LI ELC + F+ +
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744
Query: 408 DILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV-GKGFEPSLEIYSAFI 465
L ++V+ + P KSY LI G+CE G + A KV M +G PS +++A +
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 134/242 (55%), Gaps = 4/242 (1%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+++P+V TFNAL+ F +EG F E+++ EM R+ P+ ++Y+ L+ FC E + EA
Sbjct: 242 KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA 301
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+++ M K DVVAY ++I GFC+ ++ A + F EM G+ +++T+ L+ G
Sbjct: 302 RQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQG 361
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVKFG 418
+ + G + A V++ M +G P T VL+ LC +V +AL I ++ R + G
Sbjct: 362 FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD-G 420
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ P +Y L+ GLC GK+E+AL V +M + + + Y+ I G K G V+ A
Sbjct: 421 VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAV 480
Query: 479 ML 480
L
Sbjct: 481 NL 482
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 184/410 (44%), Gaps = 34/410 (8%)
Query: 87 LALRFFSFTQHKSLCKHS--LSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLF 144
+A+RFF +++ + +S S++ ++ + R R+++R L S + + L LF
Sbjct: 1 MAMRFFQLHRNRLVKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLF 60
Query: 145 EVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
+V E P + D K + ++K + +++ L G+S + TCN L+
Sbjct: 61 THMV----ESRPLPSIIDF-TKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM- 114
Query: 205 EVSRGKGVISGYEIYREVFGLDSD---ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREG 261
F S A++ +GK +K + P++ TF +L+ GF
Sbjct: 115 ----------------NCFCQSSQPYLASSFLGKMMK--LGFEPDIVTFTSLINGFCLGN 156
Query: 262 AFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYN 321
E+ + +M +G +PD Y+ ++ C+ + A L+++M + + DVV Y
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 322 TIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRK 381
+++ G C G A+ R M ++ +TF L++ + + G A +YN+M R
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 382 GFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
P T LI C + V EA + K G FP +Y LI G C+ K+++
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK-GCFPDVVAYTSLINGFCKCKKVDD 335
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQ 491
A+K+ EM KG + Y+ I G+ + G +A +E+F + V +
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA----QEVFSHMVSR 381
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 80/155 (51%), Gaps = 3/155 (1%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N T+ L+ GF + G ++V+ M G P+ +Y+VL+ C ++++A ++
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 306 EEMRDK---NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
E+M+ + V ++ YN ++ G C G++ +A F +M ++ +T+ ++ G
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
C+AG V +A+ ++ + KG +P T +I L
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL 505
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
+K++ + I + +GL+ T LI +G G + + +EVF
Sbjct: 331 KKVDDAMKIFYEMSQKGLTGNTITYTTLI----QGFGQVGKPNVAQEVFS---------- 376
Query: 235 KDVKRVVR-VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL---GCEPDCYSYSVLMA 290
V R V PN+ T+N L+ G +K ++ +M + G P+ ++Y+VL+
Sbjct: 377 ---HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 291 VFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES 350
C ++ +A ++E+MR + ++ ++ Y II G C+ G++ A F + GV+
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493
Query: 351 SSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
+ VT+ +++G R G A +++ M G
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 11/177 (6%)
Query: 326 GFCEIGEMAR----------AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY 375
FC E+ R A + F M S S + F L+N + D I +
Sbjct: 36 AFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLC 95
Query: 376 NDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCE 435
+ + G + T +L+ C + + A L +++K G P ++ LI G C
Sbjct: 96 DHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFL-GKMMKLGFEPDIVTFTSLINGFCL 154
Query: 436 EGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+MEEA+ + +MV G +P + +Y+ ID K G+V A L +M +R +
Sbjct: 155 GNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPD 211
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 187 LMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPN 246
++SRG+ + T N L+ + V I+ ++ + D A PN
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA-------------PN 424
Query: 247 VHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWE 306
+ T+N L+ G G EK V+ +M + + +Y++++ C+ +++ A L+
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 307 EMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ K V+ +VV Y T+I G G A FR+M GV
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 129 bits (323), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 196/461 (42%), Gaps = 67/461 (14%)
Query: 91 FFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLV-- 148
FF F + + ++ +Y + L+ + A+ +I + + + +F LV
Sbjct: 104 FFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEM 163
Query: 149 KTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+ CG F+ D L+ + ++ I + R+ V + C L+ + +
Sbjct: 164 RVTPMCG---FLVDALM---ITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMK 217
Query: 209 --GKGVISGY--EIYREVFGLD-----------------SDATAGIGKDVKRVVRVRPNV 247
G I G+ EI F L+ SDA + KR ++P V
Sbjct: 218 LNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR--SLQPTV 275
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
+FN L+ G+ + G ++ + +M + PD ++YS L+ C+E +M A L++E
Sbjct: 276 VSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDE 335
Query: 308 M-----------------------------------RDKNVEHDVVAYNTIIGGFCEIGE 332
M K ++ D+V YNT++ GFC+ G+
Sbjct: 336 MCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGD 395
Query: 333 MARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEV 392
+ A M G+ +T+ L++G+CR GDV++A+ + +M + G E +
Sbjct: 396 LVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSA 455
Query: 393 LIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGK 452
L+ +C + RV +A L+ +++ G+ P + +Y ++ C++G + K+ EM
Sbjct: 456 LVCGMCKEGRVIDAERALR-EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD 514
Query: 453 GFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
G PS+ Y+ ++G K G ++ A ML M V +D
Sbjct: 515 GHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDD 555
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 1/229 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN F L+ G R G + +++ + +M G +PD Y+ L+ FC+ + A +
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + + D + Y T+I GFC G++ A E +EM +G+E V F LV G C+
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCK 462
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G V A +M R G +P+ T +++ C K +LK + G P+
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLK-EMQSDGHVPSVV 521
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+Y L+ GLC+ G+M+ A + M+ G P Y+ ++G+ + N
Sbjct: 522 TYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+RP+ T+ L+ GF R G E ++ EM + G E D +S L+ C+E R+ +AE
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+ EM ++ D V Y ++ FC+ G+ + +EM G S VT+ L+NG
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ G + +A ++ + M G P+ T L+
Sbjct: 531 CKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 182 DIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVV 241
+IV ++ RGL T LI RG V + EI +E +D + G ++ RV
Sbjct: 401 NIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKE---MDQN-----GIELDRV- 451
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
F+AL+ G +EG E EM R G +PD +Y+++M FC++ +
Sbjct: 452 -------GFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTG 504
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KL +EM+ VV YN ++ G C++G+M A+ M GV +T+ L+ G
Sbjct: 505 FKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Query: 362 YCRAGD 367
+ R +
Sbjct: 565 HHRHAN 570
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 135/260 (51%), Gaps = 16/260 (6%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV ++N +M+G R+ + V+ + G +P+ Y+YS+L+ + A
Sbjct: 474 IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNAL 533
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVES-----SSVTFEH 357
++ M N+E + V Y TII G C++G+ ++A E M +E S +++
Sbjct: 534 EVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM----IEEKRLCVSCMSYNS 589
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL---DILKARV 414
+++G+ + G++DSA+ Y +MC G P T L+ LC R+ +AL D +K +
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
VK + +Y LI G C+ ME A + +E++ +G PS IY++ I G+ GN+
Sbjct: 650 VKLDI----PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 475 EMATMLRKEMFENQVRQEDG 494
A L K+M ++ +R + G
Sbjct: 706 VAALDLYKKMLKDGLRCDLG 725
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 126/241 (52%), Gaps = 1/241 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++N+++ GF++EG + + EM G P+ +Y+ LM C+ RM +A ++ +EM
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
++K V+ D+ AY +I GFC+ M A F E+ G+ S + L++G+ G++
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
+A+ +Y M + G + T LI L + A + L + GL P E Y
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASE-LYTEMQAVGLVPDEIIYTV 764
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
++ GL ++G+ + +K+ EM P++ IY+A I G+ +EGN++ A L EM +
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824
Query: 489 V 489
+
Sbjct: 825 I 825
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 34/280 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSY------------------- 285
PN TF+ L+ F + G EK + + +M LG P +
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431
Query: 286 ---------------SVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330
+ +++ C++ + EA +L +M + + +VV+YN ++ G C
Sbjct: 432 FDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQ 491
Query: 331 GEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTI 390
M A F + G++ ++ T+ L++G R D +A+ V N M E G
Sbjct: 492 KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVY 551
Query: 391 EVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMV 450
+ +I LC + +A ++L + + L + SY +I G +EG+M+ A+ EM
Sbjct: 552 QTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC 611
Query: 451 GKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
G G P++ Y++ ++G K ++ A +R EM V+
Sbjct: 612 GNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVK 651
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 107/518 (20%), Positives = 200/518 (38%), Gaps = 81/518 (15%)
Query: 24 SQFSTSSSTPPSDQ---------SHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQF 74
SQF S P +Q N + + VSLL+ + ++
Sbjct: 29 SQFPKESENPSQEQRLLVYGSTSEENPVTSKVSLLSAKPEQKDDASVI------------ 76
Query: 75 SQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHIL-SRARLIGPARDVIRVALR 133
+ L +NNP ALRF+++ + + +IHIL S G A D++ +
Sbjct: 77 -DVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLIRYVS 135
Query: 134 SPENDPKLK-LFEVLVKTYRECG--SAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSR 190
+ P L LV + + G F+ L+ + + + + VDIV ++
Sbjct: 136 TSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDR---QTDHAVDIVNQMLEL 192
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTF 250
+ N + + + + E+Y + + D G +V T
Sbjct: 193 DVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVD-----GDNV-----------TT 236
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRD 310
LM RE + +V G EPD YS+ + C+ + A L EM++
Sbjct: 237 QLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKE 296
Query: 311 KNV-EHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
K + Y ++I + G M A EM G+ + V L+ G+C+ D+
Sbjct: 297 KKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLV 356
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFL 429
SA+++++ M ++G P T VLI + +AL+ K V GL P+ +
Sbjct: 357 SALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEV-LGLTPSVFHVHTI 415
Query: 430 IKG----------------------------------LCEEGKMEEALKVQAEMVGKGFE 455
I+G LC++GK +EA ++ ++M +G
Sbjct: 416 IQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQED 493
P++ Y+ + G+ ++ N+++A ++ + E ++ +
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNN 513
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 80/152 (52%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ +N+L+ GF G D++ +M + G D +Y+ L+ ++ + A
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ EM+ + D + Y I+ G + G+ + + F EM + V + + + ++ G+
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
R G++D A ++++M KG P+G+T ++L+
Sbjct: 805 YREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 108/223 (48%), Gaps = 2/223 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ T+ ++++ ++G + + EM G + + + L+ C+ + A L
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+++M + + V ++ +I F + GEM +A EF+++M + G+ S ++ G+ +
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+ A+ ++++ G ++ LC + + EA ++L +++ G+ P
Sbjct: 422 GQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELL-SKMESRGIGPNVV 479
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
SY ++ G C + M+ A V + ++ KG +P+ YS IDG
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG 522
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
+E+ + L+ GL+ N+LI +++ ++Y+++ K
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML-----------K 717
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
D +R ++ T+ L+ G ++G +++ EM +G PD Y+V++ ++
Sbjct: 718 D-----GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKK 772
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ + K++EEM+ NV +V+ YN +I G G + A EM G+ TF
Sbjct: 773 GQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
Query: 356 EHLVNG 361
+ LV+G
Sbjct: 833 DILVSG 838
>sp|Q9FND8|PP409_ARATH Pentatricopeptide repeat-containing protein At5g40400
OS=Arabidopsis thaliana GN=At5g40400 PE=2 SV=1
Length = 610
Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 120/517 (23%), Positives = 224/517 (43%), Gaps = 68/517 (13%)
Query: 18 PKPQLLSQFSTSSSTPPSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRS---GLTP--- 71
PKP L ++ P S ++ + S L H S ++ LL R L P
Sbjct: 26 PKPILNPLYNL---LPQSQNPSKIVDVICSTLNH----SDYSVLLPNLRDEVKSLIPHLG 78
Query: 72 -TQFSQIALGLKNNPHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIRV 130
+ S++ L +++ A+ FF + + + ++ +Y ++HIL ++ A +
Sbjct: 79 YPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCE 138
Query: 131 ALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSR 190
+ ++ +F VLV EC P VFD+L+K L++ +E+ + R ++
Sbjct: 139 LIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEE---GFRVFREVLDS 195
Query: 191 GLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTF 250
G SV V TCN L+ + + + +++Y V V + PN +TF
Sbjct: 196 GFSVSVVTCNHLLNGLLKLDLMEDCWQVY----------------SVMCRVGIHPNTYTF 239
Query: 251 NALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFC----------------- 293
N L F + F +V+D +M G EPD +Y+ L++ +C
Sbjct: 240 NILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYR 299
Query: 294 ------------------EERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
++ R+REA + + M D+ ++ D ++YNT+I +C+ G M +
Sbjct: 300 RRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQ 359
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
+++ EM + V T + +V G+ R G + SA+ ++ R + + LI
Sbjct: 360 SKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIV 419
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
LC + + F A +L + + G ++Y LI+ L +EEAL ++ ++ +
Sbjct: 420 SLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQV 479
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ Y A I + G A L EMF+++V+ +
Sbjct: 480 LDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPD 516
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 88/231 (38%), Gaps = 44/231 (19%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERR----- 297
V P+ T ++ GF REG + VE+ RL + L+ C+E +
Sbjct: 372 VVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAK 431
Query: 298 -------------------------------MREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ EA L +++++N D Y +IG
Sbjct: 432 HLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGC 491
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSA--ILVYNDMCRKGFE 384
C IG AE EM S V+ S LV GYC+ D D A +L M + F+
Sbjct: 492 LCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFD 551
Query: 385 PE--GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGL 433
PE S ++ + C ++ E L+ R+ + G P + +LI+ L
Sbjct: 552 PESYNSLVKAVCETGCGYKKALE----LQERMQRLGFVPNRLTCKYLIQVL 598
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 10/255 (3%)
Query: 232 GIGKDVKRVVRVRPNVHTF---------NALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+ KDV R+ V + F NAL+ F + G E++ VW +M G EP
Sbjct: 163 ALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTL 222
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
Y+Y+ LM + AE+++E M ++ D+V YNT+I G+C+ G+ +A E R+
Sbjct: 223 YTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRD 282
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G E+ +T+ ++ D S + +Y +M KG + ++IG LC + +
Sbjct: 283 METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGK 342
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+ E + + +++ G P Y LI G + G +E+A+++ M+ +GF+P + YS
Sbjct: 343 LNEGYTVFE-NMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 401
Query: 463 AFIDGYMKEGNVEMA 477
++G K G VE A
Sbjct: 402 VVVNGLCKNGRVEEA 416
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 217/480 (45%), Gaps = 50/480 (10%)
Query: 18 PKPQLLSQFSTSSSTPPSDQS---HNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQF 74
P P+ + F+ S S+++ ++ +++LL S S ++L CR L
Sbjct: 59 PPPEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLDG--SASMESNLDGFCRKFLIKLSP 116
Query: 75 SQIALGLKNN-----PHLALRFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDVIR 129
+ ++ LK++ P +A FF +++ + H+L Y +++ +L+ A+DV R
Sbjct: 117 NFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLAL------AKDVDR 170
Query: 130 VALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMS 189
+ S E +K FE + SA + LIK + +E + + R +
Sbjct: 171 IRFVSSE----IKKFEFPMTV-----SAA---NALIK---SFGKLGMVEELLWVWRKMKE 215
Query: 190 RGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHT 249
G+ + T N L+ + V S ++ +V R++P++ T
Sbjct: 216 NGIEPTLYTYNFLMNGLVSAMFVDSAERVF----------------EVMESGRIKPDIVT 259
Query: 250 FNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMR 309
+N ++ G+ + G +K + +M G E D +Y ++ + L++EM
Sbjct: 260 YNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMD 319
Query: 310 DKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVD 369
+K ++ A++ +IGG C+ G++ F M G + + + L++GY ++G V+
Sbjct: 320 EKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVE 379
Query: 370 SAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF-GLFPTEKSYMF 428
AI + + M +GF+P+ T V++ LC RV EALD +F GL Y
Sbjct: 380 DAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF--HTCRFDGLAINSMFYSS 437
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
LI GL + G+++EA ++ EM KG Y+A ID + K V+ A L K M E +
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 497
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARL----GCEPDCYSYSVLMAVFCEERRMREA 301
+ + +NAL+ F + KV++ R+ GC+ Y+Y++L++ +E R EA
Sbjct: 466 DSYCYNALIDAFTKH---RKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEA 522
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KLW+ M DK + + + G C G++ARA + E+ GV + E ++N
Sbjct: 523 LKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINT 581
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
C+AG + A + + + +G E G V+I L R+V +A +K K G+
Sbjct: 582 LCKAGRIKEACKLADGITERGREVPGRIRTVMINAL---RKVGKADLAMKLMHSKIGI 636
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 98/211 (46%), Gaps = 3/211 (1%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N +++L+ G + G ++ E ++ EM+ GC D Y Y+ L+ F + R++ EA L+
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 490
Query: 306 EEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M ++ + V Y ++ G + A + + M G+ ++ F L G C
Sbjct: 491 KRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCL 550
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
+G V A + +++ G + + E +I LC R+ EA + + + G +
Sbjct: 551 SGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADG-ITERGREVPGR 608
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
+I L + GK + A+K+ +G G+E
Sbjct: 609 IRTVMINALRKVGKADLAMKLMHSKIGIGYE 639
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 36/174 (20%)
Query: 317 VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYN 376
V A N +I F ++G + +R+M +G+E + T+ L+NG A VDSA
Sbjct: 187 VSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSA----- 241
Query: 377 DMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
RVFE ++ + + P +Y +IKG C+
Sbjct: 242 ------------------------ERVFEVMESGRIK-------PDIVTYNTMIKGYCKA 270
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
G+ ++A++ +M +G E Y I + + L +EM E ++
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQ 324
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 140/270 (51%), Gaps = 16/270 (5%)
Query: 231 AGIGKDVKRVVR------VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYS 284
+G D R++R + PNV TF A++ F +EG F + ++ EM R +PD ++
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 285 YSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMG 344
Y+ L+ C R+ EA+++ + M K DVV YNT+I GFC+ + + FREM
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 345 LSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVF 404
G+ ++T+ ++ GY +AG D+A +++ R P T +L+ LC RV
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVE 398
Query: 405 EALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAF 464
+AL +L + K + +Y +I G+C+ G +E+A + + KG +P + Y+
Sbjct: 399 KAL-VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 465 IDGYMKEGNVEMATMLRKEMFENQVRQEDG 494
I G+ ++ + + +L ++M QEDG
Sbjct: 458 ISGFCRKRQWDKSDLLYRKM------QEDG 481
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 118/239 (49%), Gaps = 1/239 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
+++++N ++ R F V +M + G EPD + S L+ FC+ R+ +A L
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
+M + DVV YNTII G C+IG + A E F M GV + +VT+ LV G C +
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKS 425
G A + DM + P T +I + + EA+ L + + + P +
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK-LYEEMTRRCVDPDVFT 281
Query: 426 YMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI GLC G+++EA ++ MV KG P + Y+ I+G+ K V+ T L +EM
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 113/233 (48%), Gaps = 1/233 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+V T ++L+ GF + D+ +M +G PD Y+ ++ C+ + +A +L
Sbjct: 137 PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVEL 196
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
++ M V D V YN+++ G C G + A R+M + + + +TF +++ + +
Sbjct: 197 FDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK 256
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G A+ +Y +M R+ +P+ T LI LC RV EA +L V K G P
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK-GCLPDVV 315
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y LI G C+ +++E K+ EM +G Y+ I GY + G + A
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 127/260 (48%), Gaps = 26/260 (10%)
Query: 127 VIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVR 185
VI V ++ + +KL+E + T R F ++ LI C+ +++ ++
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEM--TRRCVDPDVFTYNSLINGLCMH----GRVDEAKQMLD 303
Query: 186 MLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRP 245
+++++G V T N LI + K V G +++RE+ A G+ D
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM------AQRGLVGDT-------- 349
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
T+N ++ G+++ G + ++++ +R+ P+ +YS+L+ C R+ +A L+
Sbjct: 350 --ITYNTIIQGYFQAGRPDAAQEIF---SRMDSRPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
E M+ +E D+ YN +I G C+IG + A + FR + G++ V++ +++G+CR
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Query: 366 GDVDSAILVYNDMCRKGFEP 385
D + L+Y M G P
Sbjct: 465 RQWDKSDLLYRKMQEDGLLP 484
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 114/239 (47%), Gaps = 1/239 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R P++ F+ ++ + ++ V ++ M G D YSY++++ C R A
Sbjct: 64 RPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIA 123
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ +M E DVV +++I GFC+ + A + +M G V + +++G
Sbjct: 124 LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 183
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
C+ G V+ A+ +++ M R G + T L+ LC R +A +++ V++ + P
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVP 242
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
++ +I +EGK EA+K+ EM + +P + Y++ I+G G V+ A +
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 1/217 (0%)
Query: 268 DVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGF 327
D++ +M + P +S +++ + + L+ M + HD+ +YN +I
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 328 CEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEG 387
C A +M G E VT L+NG+C+ V AI + + M GF P+
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 388 STIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
+I C V +A+++ R+ + G+ +Y L+ GLC G+ +A ++
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFD-RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+MV + P++ ++A ID ++KEG A L +EM
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 338 EFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL 397
+ F +M S S V F +++ ++ + D I +++ M G + + ++I L
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 398 CDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPS 457
C R AL ++ +++KFG P + LI G C+ ++ +A+ + ++M GF P
Sbjct: 115 CRCSRFVIALSVV-GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 458 LEIYSAFIDGYMKEGNVEMATMLRKEMFENQVRQE 492
+ IY+ IDG K G V A L M + VR +
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 145/324 (44%), Gaps = 60/324 (18%)
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
C LI E + VI YR S GI D K T+ LM G +
Sbjct: 560 CTGLINEYCKKGKVIEACSAYR------SMVDQGILGDAK----------TYTVLMNGLF 603
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
+ + E+++ EM G PD +SY VL+ F + M++A +++EM ++ + +V+
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
YN ++GGFC GE+ +A+E EM + G+ ++VT+ +++GYC++GD+ A ++++M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR-----------------VVKFGLF- 420
KG P+ L+ C V A+ I V KFG
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 421 -------------------PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
P + +Y +I LC+EG +E A ++ +M P++ Y
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 462 SAFIDGYMKEGNVEMATMLRKEMF 485
++ ++GY K G R EMF
Sbjct: 844 TSLLNGYDKMGR-------RAEMF 860
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 158/330 (47%), Gaps = 22/330 (6%)
Query: 158 PFVFDLLIKCCLEVKNIEKI-ETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGY 216
P+++D CC+ V + E + E + +++ GL + +LI R K V GY
Sbjct: 347 PYMYD----CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGY 402
Query: 217 EIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARL 276
E+ E+ KR + + P +T+ ++ G G + ++ EM
Sbjct: 403 ELLVEM--------------KKRNIVISP--YTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 277 GCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARA 336
GC P+ Y+ L+ F + R +A ++ +EM+++ + D+ YN++I G + M A
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 337 EEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGE 396
F EM +G++ ++ T+ ++GY A + SA +M G P LI E
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 397 LCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEP 456
C K +V EA ++ V + G+ K+Y L+ GL + K+++A ++ EM GKG P
Sbjct: 567 YCKKGKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 457 SLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+ Y I+G+ K GN++ A+ + EM E
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Score = 125 bits (314), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 162/379 (42%), Gaps = 62/379 (16%)
Query: 148 VKTYRECGSAP---FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIW 204
VK RECG P L+ + C K + IE C R ++ +G+ T L+
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYC---KKGKVIEAC-SAYRSMVDQGILGDAKTYTVLMN 600
Query: 205 EVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
+ + V EI+RE+ G GI P+V ++ L+ GF + G +
Sbjct: 601 GLFKNDKVDDAEEIFREMRG------KGIA----------PDVFSYGVLINGFSKLGNMQ 644
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
K ++ EM G P+ Y++L+ FC + +A++L +EM K + + V Y TII
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVY--------- 375
G+C+ G++A A F EM L G+ S + LV+G CR DV+ AI ++
Sbjct: 705 DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS 764
Query: 376 -------------------------NDMCRKGFE----PEGSTIEVLIGELCDKRRVFEA 406
N + F+ P T ++I LC K EA
Sbjct: 765 STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC-KEGNLEA 823
Query: 407 LDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFID 466
L ++ L PT +Y L+ G + G+ E V E + G EP +YS I+
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883
Query: 467 GYMKEGNVEMATMLRKEMF 485
++KEG A +L +MF
Sbjct: 884 AFLKEGMTTKALVLVDQMF 902
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 170/392 (43%), Gaps = 44/392 (11%)
Query: 107 SYATIIHILSRARLIGPARDVIRVALRSPENDPKLKLFEVLVKTY--------------- 151
+Y T++ + + + A ++++ + S P + ++ L+KT+
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCR-PNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 152 -RECGSAP--FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSR 208
+E G AP F ++ LI + + ++++ + ++ GL T A I
Sbjct: 478 MKEQGIAPDIFCYNSLI---IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI----- 529
Query: 209 GKGVISGYEIYREVFGLDSDATAGIGKDVK--RVVRVRPNVHTFNALMVGFYREGAFEKV 266
SGY +++ A K VK R V PN L+ + ++G +
Sbjct: 530 -----SGY--------IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 267 EDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGG 326
+ M G D +Y+VLM + ++ +AE+++ EMR K + DV +Y +I G
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 327 FCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPE 386
F ++G M +A F EM G+ + + + L+ G+CR+G+++ A + ++M KG P
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 387 GSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQ 446
T +I C + EA + +K GL P Y L+ G C +E A+ +
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLK-GLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 447 AEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
KG S ++A I+ K G E+ T
Sbjct: 756 GTN-KKGCASSTAPFNALINWVFKFGKTELKT 786
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 1/239 (0%)
Query: 248 HTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEE 307
HT++ L+ G + + + + EM G Y Y + V +E M +A+ L++
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 308 MRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGD 367
M + AY ++I G+C + + E EM + S T+ +V G C +GD
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 368 VDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYM 427
+D A + +M G P LI R +A+ +LK + + G+ P Y
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK-EMKEQGIAPDIFCYN 491
Query: 428 FLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
LI GL + +M+EA EMV G +P+ Y AFI GY++ A KEM E
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 75/148 (50%), Gaps = 6/148 (4%)
Query: 250 FNALMVGFYREGAFEKVEDVWVEMA-----RLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
FNAL+ ++ G E +V + R G +P+ +Y++++ C+E + A++L
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKEL 827
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ +M++ N+ V+ Y +++ G+ ++G A F E +G+E + + ++N + +
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEV 392
G A+++ + M K +G + +
Sbjct: 888 EGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 32/233 (13%)
Query: 159 FVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALI-WEVSRGKGVISGYE 217
FV+ L+ C + ++E+ T + +G + + NALI W GK +
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGTNK----KGCASSTAPFNALINWVFKFGKTELKTEV 788
Query: 218 IYR------EVFGLDSDATAGIGKDV----------------KRVVRVRPNVHTFNALMV 255
+ R + FG +D T I D + + P V T+ +L+
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 256 GFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEH 315
G+ + G ++ V+ E G EPD YSV++ F +E +A L ++M KN
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
Query: 316 D-----VVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
D + ++ GF ++GEM AE+ M S T L+N C
Sbjct: 909 DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 135/246 (54%), Gaps = 1/246 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ P+V F+AL+ F +EG + E++ EM + G PD +Y+ L+ FC+E ++ +A
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+ + M K ++ +N +I G+C+ + E FR+M L GV + +VT+ L+ G
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C G ++ A ++ +M + P+ + ++L+ LCD +AL+I + ++ K +
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE-KIEKSKMEL 490
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
Y +I G+C K+++A + + KG +P ++ Y+ I G K+G++ A +L
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 482 KEMFEN 487
++M E+
Sbjct: 551 RKMEED 556
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 132/242 (54%), Gaps = 1/242 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ P+ T+ +L+ GF +E +K + M GC P+ ++++L+ +C+ + +
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+L+ +M + V D V YNT+I GFCE+G++ A+E F+EM V V+++ L++G
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G+ + A+ ++ + + E + ++I +C+ +V +A D+ + +K G+ P
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPD 526
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRK 482
K+Y +I GLC++G + EA + +M G P+ Y+ I ++ EG+ + L +
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIE 586
Query: 483 EM 484
E+
Sbjct: 587 EI 588
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 124/245 (50%), Gaps = 5/245 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
+++ + ++ ++ G ++G+ + +++ EM G + D Y+ L+ FC R +
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
KL +M + + DVVA++ +I F + G++ AEE +EM G+ +VT+ L++G
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C+ +D A + + M KG P T +LI C + + L++ + ++ G+
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR-GVVA 420
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y LI+G CE GK+E A ++ EMV + P + Y +DG G E A
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL--- 477
Query: 482 KEMFE 486
E+FE
Sbjct: 478 -EIFE 481
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 124/250 (49%), Gaps = 3/250 (1%)
Query: 237 VKRVVRV--RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
V R+V + +P + T NAL+ G G + M G +P+ +Y ++ V C+
Sbjct: 165 VDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK 224
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
+ A +L +M ++ ++ D V Y+ II G C+ G + A F EM + G ++ +
Sbjct: 225 SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+ G+C AG D + DM ++ P+ LI + ++ EA ++ K +
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK-EM 343
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
++ G+ P +Y LI G C+E ++++A + MV KG P++ ++ I+GY K +
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403
Query: 475 EMATMLRKEM 484
+ L ++M
Sbjct: 404 DDGLELFRKM 413
Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 135/288 (46%), Gaps = 9/288 (3%)
Query: 206 VSRGKGVISGYEIYRE-VFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFE 264
VS GKG +S E R + + D + +++ R R RP + F+ L R ++
Sbjct: 31 VSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRS-RPRPRLIDFSRLFSVVARTKQYD 89
Query: 265 KVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTII 324
V D+ +M G + Y+ S+++ C R++ A ++ E D V ++T+I
Sbjct: 90 LVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLI 149
Query: 325 GGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFE 384
G C G ++ A E M G + + +T LVNG C G V A+L+ + M GF+
Sbjct: 150 NGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209
Query: 385 PEGSTIEVLIGELCDKRRVFEALDILKA---RVVKFGLFPTEKSYMFLIKGLCEEGKMEE 441
P T ++ +C + A+++L+ R +K Y +I GLC++G ++
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV----KYSIIIDGLCKDGSLDN 265
Query: 442 ALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
A + EM KGF+ + IY+ I G+ G + L ++M + ++
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
++ +++S+G + T N LI + + G E++R++ ++ VV
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM-------------SLRGVV- 419
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ T+N L+ GF G E ++++ EM PD SY +L+ C+ +A
Sbjct: 420 --ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
+++E++ +E D+ YN II G C ++ A + F + L GV+ T+ ++ G
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLI 394
C+ G + A L++ M G P G T +LI
Sbjct: 538 CKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 1/193 (0%)
Query: 300 EAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLV 359
+A L++EM ++ ++ + + + ++M L G+ + T ++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 360 NGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGL 419
N CR + A + + G+EP+ T LI LC + RV EAL+++ R+V+ G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD-RMVEMGH 173
Query: 420 FPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATM 479
PT + L+ GLC GK+ +A+ + MV GF+P+ Y + K G +A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 480 LRKEMFENQVRQE 492
L ++M E +++ +
Sbjct: 234 LLRKMEERKIKLD 246
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 125/216 (57%), Gaps = 3/216 (1%)
Query: 223 FGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDC 282
+G SDA+ + ++R ++ PN+ TF+AL+ F ++G K E ++ EM + +P+
Sbjct: 301 YGRWSDASRLLSDMIER--KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 283 YSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFRE 342
++YS L+ FC R+ EA+++ E M K+ +VV YNT+I GFC+ + + E FRE
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
Query: 343 MGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR 402
M G+ ++VT+ L++G+ +A D D+A +V+ M G P T +L+ LC +
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+ +A+ + + + + + P +Y +I+G+C+ GK
Sbjct: 479 LAKAMVVFE-YLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 120/235 (51%), Gaps = 1/235 (0%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
VRPNV T+++L+ G + + +M P+ ++S L+ F ++ ++ +AE
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
KL+EEM ++++ ++ Y+++I GFC + + A++ M + VT+ L+NG+
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C+A VD + ++ +M ++G T LI R A + K ++V G+ P
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK-QMVSVGVHPN 462
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
+Y L+ GLC+ GK+ +A+ V + EP + Y+ I+G K G +M
Sbjct: 463 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 122/250 (48%), Gaps = 6/250 (2%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P++ T N+L+ GF + +M +G +PD +++ L+ + EA L
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVAL 205
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
+ M + + D+V Y ++ G C+ G+ A +M + +E++ V + +++ C+
Sbjct: 206 IDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK 265
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
D A+ ++ +M KG P T LI LC+ R +A +L + +++ + P
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL-SDMIERKINPNLV 324
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGY-----MKEGNVEMATM 479
++ LI ++GK+ +A K+ EM+ + +P++ YS+ I+G+ + E + M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 480 LRKEMFENQV 489
+RK+ N V
Sbjct: 385 IRKDCLPNVV 394
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 161/384 (41%), Gaps = 35/384 (9%)
Query: 125 RDVIRVALRSPENDPKLKLFEVLVKTYRECGSAPFVFDL-LIKCCLEVKNIEKIETCVDI 183
R+V+R L E D + LF V+ + S PF + K + + K + +
Sbjct: 47 REVLRTGLSDIELDDAIGLFGVMAQ------SRPFPSIIEFSKLLSAIAKMNKFDLVISF 100
Query: 184 VRMLMSRGLSVKVSTCNALIWEVSR-----------GKGVISGYEIYREVFGLDS----- 227
+ G+S + T N LI R GK + GYE ++ L+S
Sbjct: 101 GEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYE--PDIVTLNSLLNGF 158
Query: 228 -------DATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEP 280
DA A + + V+ + +P+ TF L+ G + + + M + GC+P
Sbjct: 159 CHGNRISDAVALVDQMVE--MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQP 216
Query: 281 DCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFF 340
D +Y ++ C+ A L +M +E +VV Y+T+I C+ A F
Sbjct: 217 DLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 276
Query: 341 REMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDK 400
EM GV + +T+ L++ C G A + +DM + P T LI K
Sbjct: 277 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKK 336
Query: 401 RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEI 460
++ +A + L ++K + P +Y LI G C ++ EA ++ M+ K P++
Sbjct: 337 GKLVKA-EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT 395
Query: 461 YSAFIDGYMKEGNVEMATMLRKEM 484
Y+ I+G+ K V+ L +EM
Sbjct: 396 YNTLINGFCKAKRVDKGMELFREM 419
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 115/239 (48%), Gaps = 1/239 (0%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
++ NV ++ ++ + + +++ EM G P+ +YS L++ C R +A
Sbjct: 248 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDA 307
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+L +M ++ + ++V ++ +I F + G++ +AE+ + EM ++ + T+ L+NG
Sbjct: 308 SRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLING 367
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+C + A + M RK P T LI C +RV + +++ + + + GL
Sbjct: 368 FCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR-EMSQRGLVG 426
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+Y LI G + + A V +MV G P++ Y+ +DG K G + A ++
Sbjct: 427 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 485
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 114/275 (41%), Gaps = 23/275 (8%)
Query: 237 VKRVVRVRPNVHTFNALMVGFYREGAFE-KVEDVWVEMARLGCE---------------- 279
V R + VR N TF L F R AF K + E+ R G
Sbjct: 13 VHRSLVVRGNAATF-PLSFSFCRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQ 71
Query: 280 ----PDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMAR 335
P +S L++ + + E+M + H++ YN +I FC ++
Sbjct: 72 SRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSL 131
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A +M G E VT L+NG+C + A+ + + M G++P+ T LI
Sbjct: 132 ALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIH 191
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
L + EA+ ++ R+V+ G P +Y ++ GLC+ G + AL + +M E
Sbjct: 192 GLFLHNKASEAVALID-RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE 250
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
++ IYS ID K + + A L EM VR
Sbjct: 251 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 142 KLFEVLVKTYRECGSAPFVFDLLIK-CCLEVKNIEKIETCVDIVRMLMSRGLSVKVSTCN 200
KL+E ++K R F + LI C+ ++++ ++ +++ + V T N
Sbjct: 344 KLYEEMIK--RSIDPNIFTYSSLINGFCM----LDRLGEAKQMLELMIRKDCLPNVVTYN 397
Query: 201 ALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYRE 260
LI + K V G E++RE + G N T+ L+ GF++
Sbjct: 398 TLINGFCKAKRVDKGMELFRE---MSQRGLVG-------------NTVTYTTLIHGFFQA 441
Query: 261 GAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAY 320
+ + V+ +M +G P+ +Y++L+ C+ ++ +A ++E ++ +E D+ Y
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Query: 321 NTIIGGFCEIGEMARAEEFF 340
N +I G C+ G+ +F
Sbjct: 502 NIMIEGMCKAGKWKMGGIYF 521
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 128/279 (45%), Gaps = 35/279 (12%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV +N +M+ R + ++ EM G EP+ ++YS+L+ F + + + A
Sbjct: 480 IEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAW 539
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT-FEHLVNG 361
+ +M N E + V YNTII G C++G+ ++A+E + + S S T + +++G
Sbjct: 540 DVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDG 599
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI------------ 409
+ + GD DSA+ Y +M G P T LI C R+ AL++
Sbjct: 600 FVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLD 659
Query: 410 ----------------------LKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQA 447
L + + + GL P Y LI G GKM+ A+ +
Sbjct: 660 LPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYK 719
Query: 448 EMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
+MV G L Y+ IDG +K+GN+ +A+ L E+ +
Sbjct: 720 KMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLD 758
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 127/245 (51%), Gaps = 1/245 (0%)
Query: 249 TFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEM 308
++N+++ GF + G + + + EM+ G P+ +++ L+ FC+ RM A ++ EM
Sbjct: 592 SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Query: 309 RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDV 368
+ ++ D+ AY +I GFC+ +M A F E+ G+ + + L++G+ G +
Sbjct: 652 KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKM 711
Query: 369 DSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMF 428
D+AI +Y M G + T +I L + A D L + ++ G+ P E +M
Sbjct: 712 DAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASD-LYSELLDLGIVPDEILHMV 770
Query: 429 LIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQ 488
L+ GL ++G+ +A K+ EM K P++ +YS I G+ +EGN+ A L EM E
Sbjct: 771 LVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKG 830
Query: 489 VRQED 493
+ +D
Sbjct: 831 IVHDD 835
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 120/533 (22%), Positives = 211/533 (39%), Gaps = 81/533 (15%)
Query: 11 FSVSKPKPKPQLLSQF----STSSST----PPSDQSHNL---IATVVSLLTHHRSKSRWN 59
F VSK P L +F SS T PP +QS ++ +S L S N
Sbjct: 4 FMVSKRFRPPIFLHRFINPKPISSQTRFLHPPDNQSRDISDSTTETISTLEFPHKTSVPN 63
Query: 60 HL----LSLCRSGLTPTQFSQIALGLKNNPHLALRFFSFTQ--HKSLCKHSLSSYATIIH 113
H S + + + ++ LG +N+P AL++ ++ + H+ LC+ + +IH
Sbjct: 64 HSPLTSTSETENHVDDARVIEVLLGRRNDPVSALQYCNWVKPLHR-LCEGG-DVFWVLIH 121
Query: 114 ILSRARLIGPARDVIRVALRSPENDPKL---KLFEVLVKTYRECG--SAPFVFDLLIKCC 168
IL + + V S N+P L + LV + + G P F+ L+
Sbjct: 122 ILLSSIHTHDRASNLLVMFVS--NNPTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAY 179
Query: 169 LEVKNIEKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSD 228
+ K +++ VD +++ R + V N ++ + R + EIY ++
Sbjct: 180 IRNK---RMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM------ 230
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
G+ D NV T LM RE E+ ++ + G EPD +S+
Sbjct: 231 VLIGVAGD---------NVTT-QLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLA 280
Query: 289 MAVFCEERRMREAEKLWEEMRDK-NVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSG 347
+ C+ + A L EMR K V Y ++I F + G M A EM G
Sbjct: 281 VQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFG 340
Query: 348 VESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEAL 407
+ S + LVNGYC+ ++ A+ ++N M +G P+ V++ C + +A+
Sbjct: 341 IPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAI 400
Query: 408 DILKARVVKFGLFPTEKSYMFLIKG----------------------------------L 433
+ R+ + P+ +I+G
Sbjct: 401 EFY-MRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLF 459
Query: 434 CEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFE 486
C++GK++ A M KG EP++ Y+ + + + N+++A + EM E
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 132/302 (43%), Gaps = 17/302 (5%)
Query: 176 KIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGK 235
K E V I R +MSRG + + + ++ ++ RE+ G
Sbjct: 254 KPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRG----------- 302
Query: 236 DVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ V + T+ +++V F +EG E+ V EM G + + L+ +C+
Sbjct: 303 ----KLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKG 358
Query: 296 RRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTF 355
+ +A L+ M ++ + D V ++ ++ FC+ EM +A EF+ M + SSV
Sbjct: 359 NELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLV 418
Query: 356 EHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVV 415
++ G +A ++A+ ++ND + + G + C + +V A LK
Sbjct: 419 HTMIQGCLKAESPEAALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQ 477
Query: 416 KFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVE 475
K G+ P Y ++ C M+ A + +EM+ KG EP+ YS IDG+ K + +
Sbjct: 478 K-GIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQ 536
Query: 476 MA 477
A
Sbjct: 537 NA 538
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 127/329 (38%), Gaps = 62/329 (18%)
Query: 142 KLFEVLVKTYR---ECGSAPFVFDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVKVST 198
++ + L+K R C S + D +K + ++ V+ R + G S V T
Sbjct: 575 EMLQNLIKEKRYSMSCTSYNSIIDGFVK-------VGDTDSAVETYREMSENGKSPNVVT 627
Query: 199 CNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFY 258
+LI + + E+ E+ + + ++ ++ + AL+ GF
Sbjct: 628 FTSLINGFCKSNRMDLALEMTHEM----------------KSMELKLDLPAYGALIDGFC 671
Query: 259 REGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVV 318
++ + ++ E+ LG P+ Y+ L++ F +M A L+++M + + D+
Sbjct: 672 KKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLF 731
Query: 319 AYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDM 378
Y T+I G + G + A + + E+ G+ + LVNG + G A + +M
Sbjct: 732 TYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
Query: 379 CRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGK 438
+K P VL+ Y +I G EG
Sbjct: 792 KKKDVTP-----NVLL-------------------------------YSTVIAGHHREGN 815
Query: 439 MEEALKVQAEMVGKGFEPSLEIYSAFIDG 467
+ EA ++ EM+ KG +++ + G
Sbjct: 816 LNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 129/249 (51%), Gaps = 7/249 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREA 301
R+ PNV TF AL+ F + G + ++++ M ++ PD ++Y L+ C + EA
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 302 EKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
+++ M + V Y T+I GFC+ + + F EM GV ++++T+ L+ G
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDI---LKARVVKFG 418
YC G D A V+N M + P+ T VL+ LC +V +AL I ++ R +
Sbjct: 373 YCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Query: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMAT 478
+ +Y +I+G+C+ GK+E+A + + KG +P++ Y+ I G+ + G + A
Sbjct: 433 IV----TYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEAD 488
Query: 479 MLRKEMFEN 487
L K+M E+
Sbjct: 489 SLFKKMKED 497
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 127/262 (48%), Gaps = 15/262 (5%)
Query: 229 ATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVL 288
A+ +GK +K + P++ TF +L+ G+ E ++ ++ +G +P+ +Y+ L
Sbjct: 137 ASCFLGKMMK--LGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTL 194
Query: 289 MAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGV 348
+ C+ R + A +L+ +M +VV YN ++ G CEIG A R+M +
Sbjct: 195 IRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI 254
Query: 349 ESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELC------DKRR 402
E + +TF L++ + + G + A +YN M + P+ T LI LC + R+
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314
Query: 403 VFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYS 462
+F ++ + G +P E Y LI G C+ ++E+ +K+ EM KG + Y+
Sbjct: 315 MFYLME-------RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYT 367
Query: 463 AFIDGYMKEGNVEMATMLRKEM 484
I GY G ++A + +M
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQM 389
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 17/279 (6%)
Query: 183 IVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIGKDVKRVVR 242
++R +M R + V T ALI + ++ E+Y +V +
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY----------------NVMIQMS 288
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
V P+V T+ +L+ G G ++ ++ M R GC P+ Y+ L+ FC+ +R+ +
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 303 KLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGY 362
K++ EM K V + + Y +I G+C +G A+E F +M T+ L++G
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 363 CRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPT 422
C G V+ A++++ M ++ + T ++I +C +V +A D+ + K G+ P
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK-GMKPN 467
Query: 423 EKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIY 461
+Y +I G C G + EA + +M GF P+ +Y
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 145/319 (45%), Gaps = 23/319 (7%)
Query: 175 EKIETCVDIVRMLMSRGLSVKVSTCNALIWEVSRGKGVISGYEIYREVFGLDSDATAGIG 234
+IE + + ++ G V T LI + + + + E++ ++ T G
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM------GTNG-- 218
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
RPNV T+NAL+ G G + + +M + EP+ +++ L+ F +
Sbjct: 219 --------SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
++ EA++L+ M +V DV Y ++I G C G + A + F M +G + V
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRR---VFEALDILK 411
+ L++G+C++ V+ + ++ +M +KG T VLI C R E + +
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 412 ARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKE 471
+R P ++Y L+ GLC GK+E+AL + M + + ++ Y+ I G K
Sbjct: 391 SRRAP----PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 472 GNVEMATMLRKEMFENQVR 490
G VE A L +F ++
Sbjct: 447 GKVEDAFDLFCSLFSKGMK 465
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 1/218 (0%)
Query: 272 EMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIG 331
+M +LG EPD +++ L+ +C R+ +A L++++ + +VV Y T+I C+
Sbjct: 143 KMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 332 EMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIE 391
+ A E F +MG +G + VT+ LV G C G A + DM ++ EP T
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262
Query: 392 VLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVG 451
LI ++ EA ++ +++ ++P +Y LI GLC G ++EA ++ M
Sbjct: 263 ALIDAFVKVGKLMEAKELYNV-MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 452 KGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
G P+ IY+ I G+ K VE + EM + V
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 1/227 (0%)
Query: 263 FEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNT 322
F D++ M P ++ L++V + R L+E+M+ + + N
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 323 IIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKG 382
++ C + RA F +M G E VTF L+NGYC ++ AI +++ + G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 383 FEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEA 442
F+P T LI LC R + A+++ G P +Y L+ GLCE G+ +A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN-GSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 443 LKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQV 489
+ +M+ + EP++ ++A ID ++K G + A L M + V
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
Query: 336 AEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIG 395
A + F M S S + F L++ + D I ++ M G P T +++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 396 ELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFE 455
+C + A L +++K G P ++ L+ G C ++E+A+ + +++G GF+
Sbjct: 127 CVCLSSQPCRASCFL-GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 456 PSLEIYSAFIDGYMKEGNVEMATMLRKEMFENQVR 490
P++ Y+ I K ++ A L +M N R
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSR 220
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 6/251 (2%)
Query: 235 KDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCE 294
+D+KR PNV T+N L+ + + + + VEM+ GC PD SY+ +++ CE
Sbjct: 170 RDMKRD-GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCE 228
Query: 295 ERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVT 354
++E +L E E V YN +I G C+ + A E REM G+ + ++
Sbjct: 229 VGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVIS 283
Query: 355 FEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARV 414
+ L+N C +G ++ A M ++G P T+ L+ + F+ALD+ +
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
Query: 415 VKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNV 474
FGL P +Y L++G C G + +A+ V + M G P++ Y + I+G+ K G++
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL 403
Query: 475 EMATMLRKEMF 485
+ A + +M
Sbjct: 404 DGAVYIWNKML 414
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 3/245 (1%)
Query: 243 VRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAE 302
+ PNV +++ L+ G E +M + GC P+ Y+ S L+ +A
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDAL 336
Query: 303 KLWEEM-RDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNG 361
LW +M R ++ +VVAYNT++ GFC G + +A F M G + T+ L+NG
Sbjct: 337 DLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396
Query: 362 YCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFP 421
+ + G +D A+ ++N M G P ++ LC + EA +++ + K P
Sbjct: 397 FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEI-MSKENCAP 455
Query: 422 TEKSYMFLIKGLCEEGKMEEALKVQAEMVGKG-FEPSLEIYSAFIDGYMKEGNVEMATML 480
+ ++ IKGLC+ G+++ A KV +M + P++ Y+ +DG K +E A L
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 481 RKEMF 485
+E+F
Sbjct: 516 TREIF 520
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 116/513 (22%), Positives = 206/513 (40%), Gaps = 87/513 (16%)
Query: 34 PSDQSHNLIATVVSLLTHHRSKSRWNHLLSLCRSGLTPTQFSQ----IALGLKNNPHLAL 89
PS + +N + +LL +R + + + R G P F+ AL N A
Sbjct: 144 PSVKIYNHVLD--TLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 201
Query: 90 RFFSFTQHKSLCKHSLSSYATIIHILSRARLIGPARDV---------IRVALRS---PEN 137
+ +K C ++S Y T+I + L+ R++ + AL + E+
Sbjct: 202 KLLVEMSNKGCCPDAVS-YTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEH 260
Query: 138 DPKLKLFEVLVKTYRECGSAPFV--FDLLIKCCLEVKNIEKIETCVDIVRMLMSRGLSVK 195
D K FE L++ E G +P V + LI + N +IE + ++ RG
Sbjct: 261 DYK-GAFE-LMREMVEKGISPNVISYSTLINV---LCNSGQIELAFSFLTQMLKRGCHPN 315
Query: 196 VSTCNALIWEVSRGKGVISGYEIYREV---FGLDSDATA---------GIGKDVKRV--- 240
+ T ++L+ +++ ++ FGL + A G VK V
Sbjct: 316 IYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVF 375
Query: 241 -----VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEE 295
+ PN+ T+ +L+ GF + G+ + +W +M GC P+ Y+ ++ C
Sbjct: 376 SHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRH 435
Query: 296 RRMREAEKLWEEMRDKNV--------------------------------EH----DVVA 319
+ +EAE L E M +N +H ++V
Sbjct: 436 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVT 495
Query: 320 YNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMC 379
YN ++ G + + A RE+ + GVE SS T+ L++G C AG A+ + M
Sbjct: 496 YNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMM 555
Query: 380 RKGFEPEGSTIEVLIGELCDK---RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEE 436
G P+ T+ ++I C + R + LD++ K+ P SY +I GLC
Sbjct: 556 VDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWR--PDVISYTNVIWGLCRS 613
Query: 437 GKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYM 469
E+ + + M+ G PS+ +S I+ ++
Sbjct: 614 NCREDGVILLERMISAGIVPSIATWSVLINCFI 646
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 1/242 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMAR-LGCEPDCYSYSVLMAVFCEERRMREAEK 303
PN++T ++L+ G + G D+W +M R G +P+ +Y+ L+ FC + +A
Sbjct: 314 PNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVS 373
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
++ M + ++ Y ++I GF + G + A + +M SG + V + ++V C
Sbjct: 374 VFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALC 433
Query: 364 RAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTE 423
R A + M ++ P T I LCD R+ A + + + P
Sbjct: 434 RHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNI 493
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKE 483
+Y L+ GL + ++EEA + E+ +G E S Y+ + G G +A L +
Sbjct: 494 VTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGK 553
Query: 484 MF 485
M
Sbjct: 554 MM 555
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 6/206 (2%)
Query: 284 SYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREM 343
++ V++ + ++ + L ++M+ + + ++I + ++G RA E F +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 344 GLSGVESSSVTFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRV 403
G + S + H+++ + +VY DM R GFEP T VL+ LC +V
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 404 FEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSA 463
A +L K G P SY +I +CE G ++E + + + FEP + +Y+A
Sbjct: 198 DGAKKLLVEMSNK-GCCPDAVSYTTVISSMCEVGLVKEGRE-----LAERFEPVVSVYNA 251
Query: 464 FIDGYMKEGNVEMATMLRKEMFENQV 489
I+G KE + + A L +EM E +
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGI 277
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Query: 241 VRVRPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMRE 300
+ + PN +FN ++ + ++ +V+ M C PD Y+Y LM C+E R+ E
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 301 AEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVN 360
A L +EM+ + V YN +I G C+ G++ R + M L G + VT+ L++
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLF 420
G C G +D A+ + M P T LI L +RR +A+ +L + + + G
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSS-MEERGYH 359
Query: 421 PTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATML 480
+ Y LI GL +EGK EEA+ + +M KG +P++ +YS +DG +EG A +
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI 419
Query: 481 RKEMF 485
M
Sbjct: 420 LNRMI 424
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 113/224 (50%), Gaps = 27/224 (12%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN +T+++LM GF++ G E+ VW EM + GC + + YSVL+ C R++EA +
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 489
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSS----VTFEHLVN 360
W +M ++ D VAY++II G C IG M A + + EM L E S VT+ L++
Sbjct: 490 WSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM-LCQEEPKSQPDVVTYNILLD 548
Query: 361 GYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGEL------CDK-------------- 400
G C D+ A+ + N M +G +P+ T + L CDK
Sbjct: 549 GLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLK 608
Query: 401 -RRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEAL 443
+RV A I++ + K+ L P ++ +++ +C+ K+ A+
Sbjct: 609 RQRVSGACTIVEVMLGKY-LAPKTSTWAMIVREICKPKKINAAI 651
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 121/245 (49%), Gaps = 4/245 (1%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+ L+ G ++ + M G + + YSVL++ +E + EA L
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
W +M +K + ++V Y+ ++ G C G+ A+E M SG ++ T+ L+ G+ +
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A+ V+ +M + G VLI LC RV EA+ ++ ++++ G+ P
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM-MVWSKMLTIGIKPDTV 503
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGK---GFEPSLEIYSAFIDGYMKEGNVEMATMLR 481
+Y +IKGLC G M+ ALK+ EM+ + +P + Y+ +DG + ++ A L
Sbjct: 504 AYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLL 563
Query: 482 KEMFE 486
M +
Sbjct: 564 NSMLD 568
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 112/230 (48%), Gaps = 2/230 (0%)
Query: 246 NVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLW 305
N H ++ L+ G ++EG E+ +W +MA GC+P+ YSVL+ C E + EA+++
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 306 EEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCRA 365
M + Y++++ GF + G A + ++EM +G + + L++G C
Sbjct: 421 NRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGV 480
Query: 366 GDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVK--FGLFPTE 423
G V A++V++ M G +P+ +I LC + AL + + + P
Sbjct: 481 GRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDV 540
Query: 424 KSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGN 473
+Y L+ GLC + + A+ + M+ +G +P + + F++ ++ N
Sbjct: 541 VTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 5/249 (2%)
Query: 242 RVRPNVHTFNALMVGFYREGAFEK----VEDVWVEMARLGCEPDCYSYSVLMAVFCEERR 297
R + +V +FN+++ EG + + + V + P+ S+++++ C+ R
Sbjct: 143 RCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRF 202
Query: 298 MREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEH 357
+ A +++ M ++ D Y T++ G C+ + A EM G S V +
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262
Query: 358 LVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKF 417
L++G C+ GD+ + ++M KG P T LI LC K ++ +A+ +L+ R+V
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLE-RMVSS 321
Query: 418 GLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMA 477
P + +Y LI GL ++ + +A+++ + M +G+ + IYS I G KEG E A
Sbjct: 322 KCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEA 381
Query: 478 TMLRKEMFE 486
L ++M E
Sbjct: 382 MSLWRKMAE 390
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
PN T+N L+ G +G +K + M C P+ +Y L+ ++RR +A +L
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
M ++ + Y+ +I G + G+ A +R+M G + + V + LV+G CR
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A + N M G P T L+ EA+ + K + K G +
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWK-EMDKTGCSRNKF 468
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
Y LI GLC G+++EA+ V ++M+ G +P YS+ I G G+++ A L EM
Sbjct: 469 CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Query: 485 F 485
Sbjct: 529 L 529
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 1/248 (0%)
Query: 245 PNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEKL 304
P+ +N L+ G ++G +V + M GC P+ +Y+ L+ C + ++ +A L
Sbjct: 255 PSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSL 314
Query: 305 WEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYCR 364
E M + V Y T+I G + A M G + + L++G +
Sbjct: 315 LERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFK 374
Query: 365 AGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEK 424
G + A+ ++ M KG +P VL+ LC + + EA +IL R++ G P
Sbjct: 375 EGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN-RMIASGCLPNAY 433
Query: 425 SYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSAFIDGYMKEGNVEMATMLRKEM 484
+Y L+KG + G EEA++V EM G + YS IDG G V+ A M+ +M
Sbjct: 434 TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM 493
Query: 485 FENQVRQE 492
++ +
Sbjct: 494 LTIGIKPD 501
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 93/172 (54%), Gaps = 3/172 (1%)
Query: 244 RPNVHTFNALMVGFYREGAFEKVEDVWVEMARLGCEPDCYSYSVLMAVFCEERRMREAEK 303
+PN+ ++ L+ G REG + +++ M GC P+ Y+YS LM F + EA +
Sbjct: 394 KPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQ 453
Query: 304 LWEEMRDKNVEHDVVAYNTIIGGFCEIGEMARAEEFFREMGLSGVESSSVTFEHLVNGYC 363
+W+EM + Y+ +I G C +G + A + +M G++ +V + ++ G C
Sbjct: 454 VWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513
Query: 364 RAGDVDSAILVYNDM-CRK--GFEPEGSTIEVLIGELCDKRRVFEALDILKA 412
G +D+A+ +Y++M C++ +P+ T +L+ LC ++ + A+D+L +
Sbjct: 514 GIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNS 565
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 177,154,387
Number of Sequences: 539616
Number of extensions: 7273341
Number of successful extensions: 25430
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 18654
Number of HSP's gapped (non-prelim): 2742
length of query: 494
length of database: 191,569,459
effective HSP length: 122
effective length of query: 372
effective length of database: 125,736,307
effective search space: 46773906204
effective search space used: 46773906204
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)