RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 011084
(494 letters)
>gnl|CDD|215543 PLN03028, PLN03028, pyrophosphate--fructose-6-phosphate
1-phosphotransferase; Provisional.
Length = 610
Score = 1056 bits (2732), Expect = 0.0
Identities = 437/478 (91%), Positives = 458/478 (95%)
Query: 8 PRELSGLQQLRSLYQPELPPCLQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAH 67
PRELSGLQ+LRSLYQPELPPCLQGTTVRVE GD+TT ADPAD H+ISR+FPHTYGQPLAH
Sbjct: 1 PRELSGLQKLRSLYQPELPPCLQGTTVRVELGDATTAADPADAHAISRAFPHTYGQPLAH 60
Query: 68 FLRATAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGG 127
FLRATAKVPDAQ+ITEHPA+RVG+VFCGRQSPGGHNV+WGL+DALK HNP S LLGFLGG
Sbjct: 61 FLRATAKVPDAQVITEHPAVRVGVVFCGRQSPGGHNVIWGLHDALKAHNPNSVLLGFLGG 120
Query: 128 SEGLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVII 187
+EGLFAQKTLE+T ++LSTYKNQGGYD+LGRTKDQIRTTEQVNAAL AC+ L LDGLVII
Sbjct: 121 TEGLFAQKTLEITDDVLSTYKNQGGYDLLGRTKDQIRTTEQVNAALAACEALKLDGLVII 180
Query: 188 GGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISN 247
GGVTSNTDAA LAETFAEAKC TKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISN
Sbjct: 181 GGVTSNTDAAQLAETFAEAKCKTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISN 240
Query: 248 VCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICD 307
VCTDALSAEKYYYFIRLMGR+ASHVALEC LQSHPNMVILGEEVAASKLTLFD+TKQICD
Sbjct: 241 VCTDALSAEKYYYFIRLMGRKASHVALECALQSHPNMVILGEEVAASKLTLFDITKQICD 300
Query: 308 AVQARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALF 367
AVQARAEQDKNHGVIL+PEGLIESIPEVYALL+EIH LL+QGV VDNISSQLSPWASALF
Sbjct: 301 AVQARAEQDKNHGVILIPEGLIESIPEVYALLQEIHGLLKQGVSVDNISSQLSPWASALF 360
Query: 368 EFLPPFIKKQLLLQPESDDSAQLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHF 427
EFLPPFIKKQLLL PESDDSAQLSQIETEKLLA LVE EMNKR KEGTYKGKKFNAICHF
Sbjct: 361 EFLPPFIKKQLLLHPESDDSAQLSQIETEKLLAQLVETEMNKRTKEGTYKGKKFNAICHF 420
Query: 428 FGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPIT 485
FGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLK+P NKWRCGAAPIT
Sbjct: 421 FGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKSPVNKWRCGAAPIT 478
>gnl|CDD|131530 TIGR02477, PFKA_PPi, diphosphate--fructose-6-phosphate
1-phosphotransferase. Diphosphate--fructose-6-phosphate
1-phosphotransferase catalyzes the addition of phosphate
from diphosphate (PPi) to fructose 6-phosphate to give
fructose 1,6-bisphosphate (EC 2.7.1.90). The enzyme is
also known as pyrophosphate-dependent
phosphofructokinase. The usage of PPi-dependent enzymes
in glycolysis presumably frees up ATP for other
processes. TIGR02482 represents the ATP-dependent
6-phosphofructokinase enzyme contained within Pfam
pfam00365: Phosphofructokinase. This model hits
primarily bacterial, plant alpha, and plant beta
sequences [Energy metabolism,
Glycolysis/gluconeogenesis].
Length = 539
Score = 785 bits (2029), Expect = 0.0
Identities = 258/476 (54%), Positives = 327/476 (68%), Gaps = 11/476 (2%)
Query: 14 LQQLRSLYQPELPPCLQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATA 73
LQQ R Y P+LP LQG T + D TA AD + FP+TYG P+ F A
Sbjct: 1 LQQSRLQYVPKLPKVLQGDTANISLEDGEPTAAVADQEELKELFPNTYGLPIITFEPGEA 60
Query: 74 KVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFA 133
EH +++G++ G Q+PGGHNV+ GL+DALK NP S L GF+GG GL
Sbjct: 61 SP------DEHQPLKIGVILSGGQAPGGHNVISGLFDALKKLNPNSKLYGFIGGPLGLLD 114
Query: 134 QKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSN 193
+E+TKE++ TY+N GG+D++G + +I T EQ ALT K L LDGLVIIGG SN
Sbjct: 115 NNYVELTKELIDTYRNTGGFDIIGSGRTKIETEEQFAKALTTAKKLKLDGLVIIGGDDSN 174
Query: 194 TDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDAL 253
T+AA LAE FA+ T+V+GVP T++GDLKNQF+ET+ GFDT CK+ S+LI N+C DAL
Sbjct: 175 TNAALLAEYFAKHGLKTQVIGVPKTIDGDLKNQFIETSFGFDTACKIYSELIGNICRDAL 234
Query: 254 SAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARA 313
SA+KY++FIRLMGR ASH+ALEC LQ+HPN+ I+GEEVAA K+TL LT I D + RA
Sbjct: 235 SAKKYWHFIRLMGRSASHIALECALQTHPNVCIIGEEVAAKKMTLSQLTDYIADVIVKRA 294
Query: 314 EQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPV----DNISSQLSPWASALFEF 369
+ KN GVIL+PEGLIE IPEV AL+KE+++LL Q V DN+ S+LSP + ALFE
Sbjct: 295 AKGKNFGVILIPEGLIEFIPEVQALIKELNNLLAQNVLEEGRKDNVQSKLSPSSKALFES 354
Query: 370 LPPFIKKQLLLQPESDDSAQLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFG 429
LP FI+ QLLL + + Q+SQIETEKLL LV+ E+NKR KEG YKG KF+A+ HFFG
Sbjct: 355 LPEFIRHQLLLDRDPHGNVQVSQIETEKLLIELVQTELNKRKKEGEYKG-KFSAVSHFFG 413
Query: 430 YQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPIT 485
Y+ R + PS FD DY Y LG+ +LA GL GYM+T+ NL NPA +W G P+T
Sbjct: 414 YEGRCAFPSNFDSDYCYALGYTAAILLANGLTGYMSTIKNLTNPAEEWIAGGVPLT 469
>gnl|CDD|235930 PRK07085, PRK07085, diphosphate--fructose-6-phosphate
1-phosphotransferase; Provisional.
Length = 555
Score = 568 bits (1465), Expect = 0.0
Identities = 229/486 (47%), Positives = 314/486 (64%), Gaps = 23/486 (4%)
Query: 12 SGLQQLRSLYQPELPPCLQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRA 71
S LQ R Y+P+LP LQ ++ D T AD ++ FP+TYG P F++
Sbjct: 4 SYLQLARLKYRPKLPKLLQNDPGLIKIVDGEFTESVADQDELAELFPNTYGLPYVTFVKG 63
Query: 72 TAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGL 131
+ ++VG++ G Q+PGGHNV+ GL+D LK NP S L GF+GG GL
Sbjct: 64 SESS--------SKPLKVGVILSGGQAPGGHNVIAGLFDGLKKLNPDSKLFGFIGGPLGL 115
Query: 132 FAQKTLEVTKEILSTYKNQGGYDML--GRTKDQIRTTEQVNAALTACKNLNLDGLVIIGG 189
K +E+T+E++ Y+N GG+DM+ GRTK I T EQ A L K L LDGLVIIGG
Sbjct: 116 LNGKYIEITEEVIDEYRNTGGFDMIGSGRTK--IETEEQKEACLETVKKLKLDGLVIIGG 173
Query: 190 VTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVC 249
SNT+AA LAE FA+ C T+V+GVP T++GDLKN+F+ET+ GFDT K S++I N+
Sbjct: 174 DDSNTNAAILAEYFAKHGCKTQVIGVPKTIDGDLKNEFIETSFGFDTATKTYSEMIGNIS 233
Query: 250 TDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAV 309
DALSA+KY++FI+LMGR ASH+ALEC LQ+HPN+ ++ EEVA K++L D+ I +
Sbjct: 234 RDALSAKKYWHFIKLMGRSASHIALECALQTHPNICLISEEVAEKKMSLQDIVHYIASVI 293
Query: 310 QARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQ------GVPVDN----ISSQL 359
RA + KN+GVIL+PEGLIE IPE+ +L+KE++SLL + G+ + I S+L
Sbjct: 294 ADRAAKGKNYGVILIPEGLIEFIPEMKSLIKELNSLLAENESEFKGLDTEAQREYIISKL 353
Query: 360 SPWASALFEFLPPFIKKQLLLQPESDDSAQLSQIETEKLLAHLVEVEMNKRLKEGTYKGK 419
SP ++ LF+ LP I +QLLL + + Q+S+IETEKLL +V+ E+ K EG YKG
Sbjct: 354 SPESAKLFKSLPEDIARQLLLDRDPHGNVQVSKIETEKLLIEMVKKELEKLKPEGKYKG- 412
Query: 420 KFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRC 479
F+AI HFFGY+ R + PS FD DY Y LG+ ++ G GYM+T+ NL +P +W
Sbjct: 413 PFSAISHFFGYEGRSAFPSNFDADYCYALGYTAALLILNGKTGYMSTIKNLTSPYTEWIA 472
Query: 480 GAAPIT 485
GA P+T
Sbjct: 473 GAVPLT 478
>gnl|CDD|238390 cd00765, Pyrophosphate_PFK, Phosphofructokinase, a key regulatory
enzyme in glycolysis, catalyzes the phosphorylation of
fructose-6-phosphate to fructose-1,6-biphosphate. The
members belong to a subfamily of the PFKA family
(cd00363) and include pyrophosphate-dependent
phosphofructokinases. These are found in bacteria as
well as plants. These may be dimeric nonallosteric
enzymes as in bacteria or allosteric heterotetramers as
in plants.
Length = 550
Score = 454 bits (1170), Expect = e-156
Identities = 204/487 (41%), Positives = 288/487 (59%), Gaps = 22/487 (4%)
Query: 12 SGLQQLRSLYQPELPPCLQG--TTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFL 69
S +QQ R Y P+LP L+G +++ G +T+ A D ++++ FP TYGQP F
Sbjct: 4 SLVQQERINYTPKLPSVLKGDFNNIKIVEGPATSAA--GDPDALAKLFPGTYGQPSVAF- 60
Query: 70 RATAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSE 129
VPD + P +++GIV G Q+PGGHNV+ GL+D LK STL GF GG
Sbjct: 61 -----VPDQDAPSSAPKLKIGIVLSGGQAPGGHNVISGLFDYLKERAKGSTLYGFKGGPA 115
Query: 130 GLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGG 189
G+ +E+ E + Y+N GG+DM+ + +I T +Q A K L+LD LV+IGG
Sbjct: 116 GILKCDYIELNAEYIQPYRNTGGFDMICSGRTKIETEDQFKQAEETAKKLDLDALVVIGG 175
Query: 190 VTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVC 249
SNT+AA LAE F T+V+GVP T++GDLKN+ +ET+ GFDT K+ S+LI NV
Sbjct: 176 DDSNTNAALLAENFRSKGLKTRVIGVPKTIDGDLKNKEIETSFGFDTATKIYSELIGNVM 235
Query: 250 TDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAV 309
DA S KY++F++LMGR ASH+ALEC L++HPN+ I+ EEV+A K TL ++T + D +
Sbjct: 236 RDARSTGKYWHFVKLMGRSASHIALECALKTHPNICIISEEVSAQKQTLKNITDYMVDVI 295
Query: 310 QARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDN-----------ISSQ 358
RAE N GV+L+PEGLIE IPEV L+ E++ +L V N +
Sbjct: 296 CKRAELGYNFGVVLVPEGLIEFIPEVKELIAELNEILANEVVEFNGLWKKKLTEQSLKLF 355
Query: 359 LSPWASALFEFLPPFIKKQLLLQPESDDSAQLSQIETEKLLAHLVEVEMNKRLKEGTYKG 418
I++QL+L+ + + Q+S+IETEKLL +VE + K + G YKG
Sbjct: 356 DLLPKGVYLPLFIEAIQEQLMLERDPHGNVQVSRIETEKLLIQMVETRLEKMKQAGAYKG 415
Query: 419 KKFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWR 478
+F HFFGY+ R + PS FD DY Y LG+ +L +G GY+++V NL P +W
Sbjct: 416 -QFMGQSHFFGYEGRCAFPSNFDADYCYALGYGAGVLLNSGKTGYISSVGNLAAPVEEWT 474
Query: 479 CGAAPIT 485
G P+T
Sbjct: 475 VGGVPLT 481
>gnl|CDD|215140 PLN02251, PLN02251, pyrophosphate-dependent phosphofructokinase.
Length = 568
Score = 439 bits (1132), Expect = e-150
Identities = 205/477 (42%), Positives = 293/477 (61%), Gaps = 13/477 (2%)
Query: 12 SGLQQLRSLYQPELPPCLQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRA 71
S +Q R + LP L+G ++ G ++ A + I++ FP+ +GQP + +
Sbjct: 30 SEVQSSRIDHALPLPSVLKGP-FKIVDGPPSSAAGNPE--EIAKLFPNLFGQPSVMLVPS 86
Query: 72 TAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGL 131
A +++G+V G Q+PGGHNV+ G++D L+ H S L GF GG G+
Sbjct: 87 QADALS-----SDQKLKIGVVLSGGQAPGGHNVISGIFDYLQEHAKGSVLYGFKGGPAGI 141
Query: 132 FAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVT 191
K +E+T E + Y+NQGG+DM+ +D+I T EQ A L+LDGLV+IGG
Sbjct: 142 MKCKYVELTAEFIYPYRNQGGFDMICSGRDKIETPEQFKQAEETATKLDLDGLVVIGGDD 201
Query: 192 SNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTD 251
SNT+A LAE F T+V+G P T++GDLK++ V T+ GFDT CK+ S++I NV D
Sbjct: 202 SNTNACLLAEYFRAKNLKTRVIGCPKTIDGDLKSKEVPTSFGFDTACKIYSEMIGNVMID 261
Query: 252 ALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQA 311
A S KYY+F+RLMGR ASH+ LEC LQ+HPN+ I+GEEVAA KLTL ++T I D +
Sbjct: 262 ARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKLTLKNVTDYIVDVICK 321
Query: 312 RAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDN---ISSQLSPWASALFE 368
RAE N+GVIL+PEGLI+ IPEV L+ E++ +L V VD +L P + LF+
Sbjct: 322 RAELGYNYGVILIPEGLIDFIPEVQHLIAELNEILAHDV-VDEEGHWKKKLKPQSLQLFD 380
Query: 369 FLPPFIKKQLLLQPESDDSAQLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFF 428
FLP I++QL+L+ + + Q+++IETEK+L +VE E+ KR +EG+YKG F HFF
Sbjct: 381 FLPHAIQEQLMLERDPHGNVQVAKIETEKMLIQMVETELEKRKQEGSYKG-HFKGQSHFF 439
Query: 429 GYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPIT 485
GY+ R LP+ FD Y Y LG+ +L +G G +++V NL P +W G +T
Sbjct: 440 GYEGRCGLPTNFDATYCYALGYGAGALLHSGKTGLISSVGNLAAPVEEWTVGGTALT 496
>gnl|CDD|185647 PTZ00468, PTZ00468, phosphofructokinase family protein;
Provisional.
Length = 1328
Score = 359 bits (923), Expect = e-112
Identities = 177/483 (36%), Positives = 267/483 (55%), Gaps = 8/483 (1%)
Query: 3 SDFGIPRELSGLQQLRSLYQPELPPCLQGTTVRVEFGDSTTTADPADTHSISRSFPHTYG 62
S + S +Q R ++P LP L+ E + + +S FP T G
Sbjct: 23 SASSLHEGQSNMQMWRRRWEPCLPHILRSPLSIKEV-SAFEGMGKMERSDVSSYFPLTSG 81
Query: 63 QPLAHFLRATAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLL 122
L F A + + + PA R+G+V G Q+ GGHNV+ GL +KL N S L
Sbjct: 82 NSLVKF-EAISDGSSSW--KKFPARRIGVVLSGGQASGGHNVIAGLMSYIKLCNQSSQLF 138
Query: 123 GFLGGSEGLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLD 182
GFLGG EG+++++ E+T++ ++ NQGG++++ + +I T EQ+ A+L C+ L L
Sbjct: 139 GFLGGPEGVYSERYRELTEDDINGILNQGGFNIICSGRHKIETEEQMRASLEICEKLKLH 198
Query: 183 GLVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNS 242
GLV+IGG SNT+AA LAE F T VVG P T++GDLKN+ +ET+ G+DT K S
Sbjct: 199 GLVVIGGDDSNTNAAVLAEYFKRNSSSTVVVGCPKTIDGDLKNEVIETSFGYDTAVKTYS 258
Query: 243 QLISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLT 302
+ I ++ + YYF+RLMGR ASH+ LEC LQ+ NM+++GEE+ +L +
Sbjct: 259 EQIGSIMDAIKTEGYGYYFVRLMGRSASHITLECGLQTRANMILIGEEIKEENRSLMSIV 318
Query: 303 KQICDAVQARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDNISSQLSPW 362
+I + + R K HG++LLPEGLIE IPE L+KE++ +L + I LS
Sbjct: 319 DEIVEMILKRDSLGKKHGIVLLPEGLIEFIPEFETLIKELNLILLKTNDRKQIIDSLSQE 378
Query: 363 ASALFEFLPPFIKKQLLLQPESDDSAQLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFN 422
LF LP ++ QLLL+ + + Q+++I TE+LL H+ + ++ + K+ N
Sbjct: 379 MKTLFLELPSDVQNQLLLERDPHGNVQVAKIATEELLVHMAKEKLEEVKKDYILD----N 434
Query: 423 AICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAA 482
H+FGY+ R +LPS FD Y + LGH ++ +GYMA V L +W
Sbjct: 435 VKTHYFGYEGRCALPSNFDASYCFALGHTAAALIDNQRSGYMAVVRKLSLTPEQWEPAGC 494
Query: 483 PIT 485
P+T
Sbjct: 495 PLT 497
Score = 184 bits (468), Expect = 4e-50
Identities = 141/550 (25%), Positives = 227/550 (41%), Gaps = 83/550 (15%)
Query: 12 SGLQQLRSLYQPELPPCLQGTTVRV--EFGDSTTTADPADTHSISRSFPHTYGQPLAHFL 69
S L Q R ++P L T + + S++ D D + I++ PH G+ + L
Sbjct: 587 SELSQNRCKDDLKIPKILLSTASKFNDDLIISSSCRD-LDAYIITKCLPHQTGRHNSKTL 645
Query: 70 --RATAKVPDAQIITE--HPAIRVGIVFCGR---------QSPGGHNVVWGLYDALKLHN 116
R I E VG +PG NV+ GL + L
Sbjct: 646 QLREEEYSSPFTEIRESSSSKSSVGNSLACESLGLILSCLSTPGTQNVICGLVNGLPSLK 705
Query: 117 PK---STLLGFLGGSEGLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAAL 173
+L F G + L T E + E N GG + ++ +E+ +
Sbjct: 706 QLIVFKSLSDFYEG-KALKVDLTSEGSLEFFENSLNSGGCIFPNGVEIKMNVSEKKYSNT 764
Query: 174 T----------------ACKNL-------------NLDGLVIIGGVTSNTDAAYLAE--- 201
T +CK L N+ + I+G + T A L+E
Sbjct: 765 TLKANDNQEFTNSSCVLSCKGLVSNDFLSQLLSFFNMRAIAIVGNSEAATFGASLSEQLI 824
Query: 202 --TFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYY 259
+ K VV VPV L + +Q +ET +GFD++ K S L+ N+ TD+ SA KY+
Sbjct: 825 CMSLNGMKSEIPVVFVPVCLENSISHQMIETCIGFDSVTKSISTLVGNLLTDSASATKYW 884
Query: 260 YFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKL----------TLFDLTKQICDAV 309
YF++++G + S+VALE +Q+HPN+V++ E A SKL TL D+ +ICD +
Sbjct: 885 YFMKMIGDKTSNVALEVGIQTHPNLVVIPERYADSKLSVYGSEMAGVTLDDIITEICDII 944
Query: 310 QARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDNI------------SS 357
R+ Q N G +L+ EGL + +VY +E + + + S
Sbjct: 945 CLRSNQGNNFGGLLVSEGLFD---QVYP-TREYRKIFSRFSTQNLCNASNSGNCEILGSE 1000
Query: 358 QLSPWASALFE-FLPPFIKKQLLLQPESDDSAQLSQIETEKLLAHLVEVEMNKRLKEGTY 416
LS + + E F F L +S ++ + TE +L+ LV+ E+ R +
Sbjct: 1001 SLSRYEKKVVEDFKLIFSDIDERLIENLINSRKICDVRTEIILSALVQKELKFRRSKNKI 1060
Query: 417 KGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGL-NGYMATVTNLKNPAN 475
K N +C F Q R +PS FD + G + I+ + L GY+ + + + +
Sbjct: 1061 KN-GMNPVCFSFTDQVRACIPSDFDSTLGLMYGMLASKIINSNLVGGYVTGIKGVLSQID 1119
Query: 476 KWRCGAAPIT 485
W A PI+
Sbjct: 1120 SWNMYAIPIS 1129
>gnl|CDD|240345 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisional.
Length = 1419
Score = 337 bits (865), Expect = e-103
Identities = 170/474 (35%), Positives = 275/474 (58%), Gaps = 12/474 (2%)
Query: 10 ELSGLQQLRSLYQPELPPCLQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFL 69
+LS LQ R YQP LP L +E + D + R + + P+ +
Sbjct: 105 DLSPLQYERIKYQPTLPKALASEYQILEENHGDDFINKKDYEEVKRFLKNLHNLPILNVK 164
Query: 70 RATAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSE 129
+ + +++GI+ G +PGGHNV+ G+YD K +N +S ++GFLGG +
Sbjct: 165 ETN----NHESFKGGNVLKIGIILSGGPAPGGHNVISGIYDYAKRYNEQSQVIGFLGGID 220
Query: 130 GLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGG 189
GL+++ + +T +++ ++N GG++ML + ++R + + A L L+GLVIIGG
Sbjct: 221 GLYSKNYVTITDSLMNRFRNLGGFNMLWSGRGKVRNKDDLIAIENIVAKLKLNGLVIIGG 280
Query: 190 VTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVC 249
SN++AA ++E FAE + P ++G+P T++GDLK++ +E + GFDT K S++I N+C
Sbjct: 281 DGSNSNAALISEYFAERQIPISIIGIPKTIDGDLKSEAIEISFGFDTATKTYSEVIGNLC 340
Query: 250 TDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAV 309
TD + Y+ +R+MGR ASHV LEC LQ+ PN+V++GEEV L+L D+ I + +
Sbjct: 341 TDVKTGHNVYHVVRVMGRSASHVVLECALQTRPNIVLIGEEVEKENLSLKDIVSNIVNTI 400
Query: 310 QARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEF 369
R +KN+GVIL+PEGLIE +PE+ L+ E++ +L++G P D + S +++F
Sbjct: 401 LKRRSLNKNYGVILIPEGLIEFVPEMKILIGELNVILKEG-PFDASKLKHS---REVWDF 456
Query: 370 LPPFIKKQLLLQPESDDSAQLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFG 429
LP I+ QLL+ ES Q+ +I TE+L+ LVE E+ K L + + H+ G
Sbjct: 457 LPSIIRDQLLMDRESTGYIQVGKIATERLIIVLVESELAK-LND---NNLNIQFMAHYLG 512
Query: 430 YQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAP 483
Y+ R ++PS FDC+Y Y LG+ ++ GYM+ + NL++ W A P
Sbjct: 513 YEGRCAIPSNFDCNYCYALGYNAALLIDHKKTGYMSIIQNLEDSYANWIPAAIP 566
Score = 306 bits (785), Expect = 2e-92
Identities = 193/518 (37%), Positives = 275/518 (53%), Gaps = 61/518 (11%)
Query: 11 LSGLQQLRSLYQPELPPCLQGTTVRVEFGDSTTTADPADTHSISRSFPH-TYG-----QP 64
+S LQ R + ELP +V G + DP I ++PH +Y Q
Sbjct: 764 MSELQTSRLYNKLELPELCSDLKAKVRAGKQYISNDPYTQKQILSNYPHMSYENKFQIQE 823
Query: 65 LAHFLRATAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGF 124
+ H AT I E I++GIVF RQ+PG NV+ GLY LKL K + F
Sbjct: 824 IFHDKYATP------ISFE---IKIGIVFLSRQAPGAMNVLCGLYRRLKLL--KGVCIAF 872
Query: 125 LGGSEGLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQ-IRTTEQVNAALTACKNLNLDG 183
G GL K + + + ++ + NQGG ++ G + + + E N NL L+G
Sbjct: 873 YG-LYGLLNNKYIIIDDDNIAKHVNQGGLELTGNSPEHSLFDKENRNKVCETVTNLQLNG 931
Query: 184 LVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQ 243
LV+ G + T+AA LAE F E K PT VVG+P+T + +L ++ +ET VGFD+ KV +
Sbjct: 932 LVMPGSNVTITEAALLAEYFLEKKIPTSVVGIPLTGSNNLIHELIETCVGFDSSTKVYAS 991
Query: 244 LISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTK 303
LI NV TDA+S KY++FIRLMGR SH LEC LQ+HPNMVI+ EE A+ TL+ + +
Sbjct: 992 LIGNVLTDAVSMPKYWHFIRLMGRSPSHEVLECALQTHPNMVIISEEYGAADKTLWRVVQ 1051
Query: 304 QICDAVQARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLL----RQGVPVD------ 353
I D V ARAE KN+G +L+P+ L+ +P + LL EI +L +G V+
Sbjct: 1052 DIADVVCARAELGKNYGTVLIPDALLMHLPHMKILLSEISDILNDANEKGQLVEARNDLV 1111
Query: 354 NIS---------------------------SQLSPWASALFEFLPPFIKKQLLLQPESD- 385
N+S S+L+PW+ AL + P FI K+LL D
Sbjct: 1112 NLSTTQHGHLGSTAGTVAGAEQPLSASPWVSKLTPWSLALLKTFPQFIIKELL---HVDL 1168
Query: 386 DSAQLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYA 445
S + ++ETE+LL +V+ E+++R ++G Y G F + HFFGYQ R SLPS+FDC A
Sbjct: 1169 RSMRFEKLETEQLLLQMVKEELHQRKQKGKYSG-SFMGLTHFFGYQGRSSLPSEFDCKLA 1227
Query: 446 YVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAP 483
Y GH ++ +GL GY+ ++ L W+ A P
Sbjct: 1228 YSYGHAASIVIESGLTGYIVSIRGLCGNIKDWKLFAIP 1265
>gnl|CDD|238216 cd00363, PFK, Phosphofructokinase, a key regulatory enzyme in
glycolysis, catalyzes the phosphorylation of
fructose-6-phosphate to fructose-1,6-biphosphate. The
members belong to PFK family that includes ATP- and
pyrophosphate (PPi)- dependent phosphofructokinases.
Some members evolved by gene duplication and thus have a
large C-terminal/N-terminal extension comprising a
second PFK domain. Generally, ATP-PFKs are allosteric
homotetramers, and PPi-PFKs are dimeric and
nonallosteric except for plant PPi-PFKs which are
allosteric heterotetramers.
Length = 338
Score = 204 bits (521), Expect = 1e-61
Identities = 95/399 (23%), Positives = 157/399 (39%), Gaps = 86/399 (21%)
Query: 88 RVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTY 147
++G++ G +PG + + G+ + + G G GL E+ E +S
Sbjct: 2 KIGVLTSGGDAPGMNAAIRGVVRSAIAEG--LEVYGIYEGYAGLVEGDIKELDWESVSDI 59
Query: 148 KNQGGYDMLGRTKDQI-RTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEA 206
N+GG ++G + + RT E A K +D LV+IGG S T A L E +
Sbjct: 60 INRGGT-IIGSARCKEFRTEEGRAKAAENLKKHGIDALVVIGGDGSYTGADLLTEEWPSK 118
Query: 207 KCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMG 266
V+G+P T++ D+K + +GFDT K + I + A S + + + +MG
Sbjct: 119 YQGFNVIGLPGTIDNDIKG--TDYTIGFDTALKTIVEAIDRIRDTASS-HQRTFVVEVMG 175
Query: 267 RRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPE 326
R +ALE L + +++ + EE AA + +++ D ++ R E+ K HG+++
Sbjct: 176 RHCGDIALEAGLATGADIIFIPEEPAAD-----EWEEEMVDVIKKRRERGKRHGIVI--- 227
Query: 327 GLIESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLQPESDD 386
+ E +F+P
Sbjct: 228 -----VAE------------------------------GAIDFIP--------------- 237
Query: 387 SAQLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAY 446
+ TEKLLA LVE +RL F+ G+ RG P+ FD A
Sbjct: 238 -----KPITEKLLAKLVE----ERLG--------FDTRATVLGHVQRGGTPTAFDRILAS 280
Query: 447 VLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPIT 485
LG +L G G + NL N+ + P+T
Sbjct: 281 RLGAEAVELLLEGTGGTPVGIQNL----NENQVVRHPLT 315
>gnl|CDD|223283 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate transport and
metabolism].
Length = 347
Score = 197 bits (503), Expect = 8e-59
Identities = 94/402 (23%), Positives = 147/402 (36%), Gaps = 84/402 (20%)
Query: 88 RVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTY 147
++ I+ G +PG + V+ + + G G GL +T+E +
Sbjct: 4 KIAILTSGGDAPGMNAVIRAVVRTAIKEG--LEVFGIYNGYLGLLEGDIKPLTREDVDDL 61
Query: 148 KNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAK 207
N+GG + + +T E A K L +D LV+IGG S T AA LAE
Sbjct: 62 INRGGTFLGSARFPEFKTEEGRKVAAENLKKLGIDALVVIGGDGSYTGAALLAEEG---- 117
Query: 208 CPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGR 267
VVGVP T++ D+ + +GFDT + + I N+ D S+ + + + +MGR
Sbjct: 118 -GIPVVGVPKTIDNDIS--GTDFTIGFDTALETAVEAIDNLR-DTASSHERIFIVEVMGR 173
Query: 268 RASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEG 327
A +AL L + +++++ EE A L + +L +I +AR K H +I++ EG
Sbjct: 174 HAGWLALAAGLATGADIILIPEEPA--DLIIEELIAEIKAKREARG---KKHAIIVVAEG 228
Query: 328 LIESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLQPESDDS 387
I+ I ++
Sbjct: 229 AIDQIG----------------------------------------------------EN 236
Query: 388 AQLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYV 447
E+LLA F G+ RG PS FD A
Sbjct: 237 GAELLAAIEELLAL-----------------GDFETRVTVLGHIQRGGTPSAFDRVLASR 279
Query: 448 LGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITVRFS 489
LG +L G GYM + N K AP+ + S
Sbjct: 280 LGAAAVDLLLEGKTGYMVGIRNNKIVHVPIDEAVAPLKMVMS 321
>gnl|CDD|213713 TIGR02482, PFKA_ATP, 6-phosphofructokinase. 6-phosphofructokinase
(EC 2.7.1.11) catalyzes the addition of phosphate from
ATP to fructose 6-phosphate to give fructose
1,6-bisphosphate. This represents a key control step in
glycolysis. This model hits bacterial ATP-dependent
6-phosphofructokinases which lack a beta-hairpin loop
present in TIGR02483 family members. TIGR02483 contains
members that are ATP-dependent as well as members that
are pyrophosphate-dependent. TIGR02477 represents the
pyrophosphate-dependent phosphofructokinase,
diphosphate--fructose-6-phosphate 1-phosphotransferase
(EC 2.7.1.90) [Energy metabolism,
Glycolysis/gluconeogenesis].
Length = 301
Score = 70.8 bits (174), Expect = 1e-13
Identities = 60/243 (24%), Positives = 108/243 (44%), Gaps = 20/243 (8%)
Query: 88 RVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTY 147
++GI+ G +PG + + + H + + G G +GL K + + +S
Sbjct: 1 KIGILTSGGDAPGMNAAIRAVVRTAIYHGFE--VYGIRRGYKGLINGKIEPLESKNVSGI 58
Query: 148 KNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAK 207
++GG + + +T E A+ K L ++GLV+IGG S T A L E
Sbjct: 59 IHRGGTILGTARCPEFKTEEVREKAVENLKKLGIEGLVVIGGDGSYTGAQKLYEEGG--- 115
Query: 208 CPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGR 267
V+G+P T++ D+ + +GFDT + + A S E+ + I +MGR
Sbjct: 116 --IPVIGLPGTIDNDI--PGTDYTIGFDTALNTIIDAVDKIRDTATSHER-AFVIEVMGR 170
Query: 268 RASHVALECTLQSHPNMVILGEEVAASKLTLFDLT-KQICDAVQARAEQDKNHGVILLPE 326
A +AL + + ++I+ E FD ++ ++ + E K H +I++ E
Sbjct: 171 HAGDLALYAGIATGAEIIIIPE---------FDYDIDELIQRLKEQHEAGKKHSIIIVAE 221
Query: 327 GLI 329
G I
Sbjct: 222 GNI 224
>gnl|CDD|185539 PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Provisional.
Length = 459
Score = 68.5 bits (168), Expect = 2e-12
Identities = 56/241 (23%), Positives = 105/241 (43%), Gaps = 15/241 (6%)
Query: 87 IRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILST 146
++ GIV CG PG + V+ L L + T+ G G +GL+ + +++ + + T
Sbjct: 88 VKAGIVTCGGLCPGLNVVIRELVMNLINNYGVKTIYGAKYGYKGLYKEDWIKLDPKDVKT 147
Query: 147 YKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEA 206
GG +LG + R + ++ L +GG ++ A + +
Sbjct: 148 IHRLGG-TILGSS----RGGFDPKVMVDTLIRHGINILFTLGGDGTHRGALAIYKELRRR 202
Query: 207 KCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMG 266
K VVG+P T++ D+ ++ + GF T + I +A SA+ ++LMG
Sbjct: 203 KLNISVVGIPKTIDNDIP--IIDESFGFQTAVEEAQNAIRAAYVEAKSAKNGVGIVKLMG 260
Query: 267 RRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPE 326
R + +AL ++ S V L E L + + + ++ R ++ H VI++ E
Sbjct: 261 RDSGFIALHASVASADVNVCLIPEFD------IPL-EGVLEYIEQRLQKKG-HCVIVVAE 312
Query: 327 G 327
G
Sbjct: 313 G 313
>gnl|CDD|235869 PRK06830, PRK06830, diphosphate--fructose-6-phosphate
1-phosphotransferase; Provisional.
Length = 443
Score = 61.8 bits (151), Expect = 3e-10
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 21/247 (8%)
Query: 87 IRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGL---FAQKTLEVTKEI 143
++ IV CG PG ++V+ + L H +LG G +GL + +E+T E+
Sbjct: 81 VKAAIVTCGGLCPGLNDVIRAIVLELHHHYGVRRILGIRYGYQGLIPRYGHDPVELTPEV 140
Query: 144 LSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETF 203
++ GG +LG ++ E V+ +N++ L +IGG + A+ +AE
Sbjct: 141 VADIHEFGG-TILGSSRGPQDPEEIVDTLE----RMNINILFVIGGDGTLRGASAIAEEI 195
Query: 204 AEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIR 263
V+G+P T++ D+ F++ + GF+T + ++ I +A A ++
Sbjct: 196 ERRGLKISVIGIPKTIDNDIN--FIQKSFGFETAVEKATEAIRCAHVEANGAPNGIGLVK 253
Query: 264 LMGRRASHVALECTL-QSHPNMVILGEEVAASKLTLFDLTKQ--ICDAVQARAEQDKNHG 320
LMGR + +A L N V++ E FDL + A++ R ++ H
Sbjct: 254 LMGRHSGFIAAYAALASKDVNFVLIPE-------VPFDLEGPNGLLAALEKRL-AERGHA 305
Query: 321 VILLPEG 327
VI++ EG
Sbjct: 306 VIVVAEG 312
>gnl|CDD|178178 PLN02564, PLN02564, 6-phosphofructokinase.
Length = 484
Score = 60.1 bits (146), Expect = 1e-09
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 18/218 (8%)
Query: 67 HFLRATAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNV----VWGLYDALKLHNPKSTLL 122
HF RA P ++ E +R IV CG PG + V V GL + +L
Sbjct: 71 HFRRAG---PRQKVYFESDEVRACIVTCGGLCPGLNTVIREIVCGLSYMYGVTR----IL 123
Query: 123 GFLGGSEGLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLD 182
G GG G +++ T+ +T ++++ +GG +LG ++ T++ V++ ++ ++
Sbjct: 124 GIDGGYRGFYSRNTIPLTPKVVNDIHKRGG-TILGTSRGGHDTSKIVDS----IQDRGIN 178
Query: 183 GLVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNS 242
+ IIGG + A+ + E V G+P T++ D+ ++ + GFDT +
Sbjct: 179 QVYIIGGDGTQKGASVIYEEIRRRGLKVAVAGIPKTIDNDIP--VIDKSFGFDTAVEEAQ 236
Query: 243 QLISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQS 280
+ I+ +A S E ++LMGR + +A+ TL S
Sbjct: 237 RAINAAHVEAESVENGIGLVKLMGRYSGFIAMYATLAS 274
>gnl|CDD|233887 TIGR02483, PFK_mixed, phosphofructokinase. Members of this family
that are characterized, save one, are
phosphofructokinases dependent on pyrophosphate (EC
2.7.1.90) rather than ATP (EC 2.7.1.11). The exception
is one of three phosphofructokinases from Streptomyces
coelicolor. Family members are both bacterial and
archaeal [Energy metabolism,
Glycolysis/gluconeogenesis].
Length = 324
Score = 56.5 bits (137), Expect = 8e-09
Identities = 67/252 (26%), Positives = 113/252 (44%), Gaps = 40/252 (15%)
Query: 88 RVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKT-----LEVTKE 142
R+G++ G PG + V+ G+ + ++G G GL T LE +
Sbjct: 1 RIGVLTGGGDCPGLNAVIRGVVRR-AIAEYGWEVIGIRDGWRGLLEGDTVPLLDLEDVRG 59
Query: 143 ILSTYKNQGGYDMLGRT-----KDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAA 197
IL +GG +LG + K + +++ A K L LD L+ IGG
Sbjct: 60 ILP----RGG-TILGSSRTNPFKYEEDGDDKIVAN---LKELGLDALIAIGG----DGTL 107
Query: 198 YLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNV--GFDTICKVNSQLISNVCTDALSA 255
+A A+ P VVGVP T++ DL+ T+ GFDT ++ ++ + + T A S
Sbjct: 108 GIARRLADKGLP--VVGVPKTIDNDLE----ATDYTFGFDTAVEIATEALDRLHTTAESH 161
Query: 256 EKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQ 315
+ + +MGR A +AL + + VIL E+ FD+ +C+ V+ R +
Sbjct: 162 HR-VMVVEVMGRHAGWIALHSGIAGGAD-VILIPEIP------FDI-DSVCEKVRERFAR 212
Query: 316 DKNHGVILLPEG 327
K ++++ EG
Sbjct: 213 GKRFAIVVVAEG 224
>gnl|CDD|235111 PRK03202, PRK03202, 6-phosphofructokinase; Provisional.
Length = 320
Score = 55.9 bits (136), Expect = 1e-08
Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 55/251 (21%)
Query: 86 AIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILS 145
AIR +V G V G+YD G+ G EG + L+ +I+
Sbjct: 19 AIR-AVVRTAISE--GLEVY-GIYD------------GYAGLLEGDIVKLDLKSVSDII- 61
Query: 146 TYKNQGGYDMLG--RTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETF 203
N+GG +LG R + + E A+ K L +D LV+IGG S A L E
Sbjct: 62 ---NRGG-TILGSARFP-EFKDEEGRAKAIENLKKLGIDALVVIGGDGSYMGAKRLTE-- 114
Query: 204 AEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDAL-------SAE 256
P V+G+P T++ D+ + +GFDT N +A+ S+
Sbjct: 115 --HGIP--VIGLPGTIDNDIA--GTDYTIGFDTAL--------NTAVEAIDRLRDTASSH 160
Query: 257 KYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQD 316
+ + + +MGR A +AL + ++++ E FD+ +++C ++ E+
Sbjct: 161 ERVFIVEVMGRHAGDLALHAGIAGGAEVILIPEV-------PFDI-EELCAKIKKGRERG 212
Query: 317 KNHGVILLPEG 327
K H +I++ EG
Sbjct: 213 KKHAIIVVAEG 223
>gnl|CDD|178472 PLN02884, PLN02884, 6-phosphofructokinase.
Length = 411
Score = 56.0 bits (135), Expect = 2e-08
Identities = 49/207 (23%), Positives = 103/207 (49%), Gaps = 10/207 (4%)
Query: 76 PDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQ- 134
P +I E ++ IV CG PG ++V+ + L+++ K+ ++G G G F +
Sbjct: 43 PRKKIYFEPEEVKAAIVTCGGLCPGLNDVIRQIVFTLEIYGVKN-IVGIPFGYRGFFEKG 101
Query: 135 -KTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSN 193
+ ++++++ GG +LG ++ +T++ V++ + ++ L ++GG ++
Sbjct: 102 LSEMPLSRKVVQNIHLSGG-SLLGVSRGGAKTSDIVDSI----EARGINMLFVLGGNGTH 156
Query: 194 TDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDAL 253
A + + K VVGVP T++ D+ ++ GFDT + + I++ +A
Sbjct: 157 AGANAIHNECRKRKMKVSVVGVPKTIDNDI--LLMDKTFGFDTAVEEAQRAINSAYIEAH 214
Query: 254 SAEKYYYFIRLMGRRASHVALECTLQS 280
SA ++LMGR + +A+ +L S
Sbjct: 215 SAYHGIGLVKLMGRSSGFIAMHASLAS 241
>gnl|CDD|238388 cd00763, Bacterial_PFK, Phosphofructokinase, a key regulatory
enzyme in glycolysis, catalyzes the phosphorylation of
fructose-6-phosphate to fructose-1,6-biphosphate. The
members belong to a subfamily of the PFKA family
(cd00363) and include bacterial ATP-dependent
phosphofructokinases. These are allosrterically
regulated homotetramers; the subunits are of about 320
amino acids.
Length = 317
Score = 53.2 bits (128), Expect = 1e-07
Identities = 60/258 (23%), Positives = 111/258 (43%), Gaps = 25/258 (9%)
Query: 88 RVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTY 147
R+G++ G +PG + + G+ + G G GL A + + + +S
Sbjct: 2 RIGVLTSGGDAPGMNAAIRGV--VRSAIAEGLEVYGIRDGYAGLIAGDIVPLDRYSVSDI 59
Query: 148 KNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYL-AETFAEA 206
N+GG + + + E A+ K +D LV+IGG D +Y+ A E
Sbjct: 60 INRGGTFLGSARFPEFKDEEGQAKAIEQLKKHGIDALVVIGG-----DGSYMGAMRLTEH 114
Query: 207 KCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMG 266
P VG+P T++ D+ + +GFDT + I + D S+ + + +MG
Sbjct: 115 GFP--CVGLPGTIDNDIPG--TDYTIGFDTALNTVVEAIDRI-RDTSSSHQRISVVEVMG 169
Query: 267 RRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPE 326
R +AL + +++ E FD +++ + ++A E+ K H ++++ E
Sbjct: 170 RHCGDIALAAGIAGGAEFIVIPEAE-------FDR-EEVANRIKAGIERGKKHAIVVVAE 221
Query: 327 GLIESIPEVYALLKEIHS 344
G+ +V L KEI
Sbjct: 222 GVY----DVDELAKEIEE 235
>gnl|CDD|109425 pfam00365, PFK, Phosphofructokinase.
Length = 279
Score = 51.6 bits (124), Expect = 3e-07
Identities = 49/215 (22%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 127 GSEGLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNL---NLDG 183
G GL A ++ E +S +GG +G + + A +NL +D
Sbjct: 39 GYAGLVAGNIKQLDWESVSDIIQRGG-TFIGSARCPEFREREGRLK--AAENLKKHGIDA 95
Query: 184 LVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQ 243
LV+IGG S T A L VG+P T++ D+ + +GFDT +
Sbjct: 96 LVVIGGDGSYTGADLLTSEH-----GFNCVGLPGTIDNDICG--TDYTIGFDTALNTIVE 148
Query: 244 LISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTK 303
I + A S ++ + + +MGR +AL + + + + E F +
Sbjct: 149 AIDRIRDTASSHQRTF-VVEVMGRHCGDLALVAGIAGGADYIFIPEAP-------FW-EE 199
Query: 304 QICDAVQARAEQDKNHGVILLPEGLIESIPEVYAL 338
++C+ ++ E+ K H ++++ EG I+ I +
Sbjct: 200 ELCNRLKRGRERGKRHNIVIVAEGAIDPITSEFVK 234
>gnl|CDD|184487 PRK14071, PRK14071, 6-phosphofructokinase; Provisional.
Length = 360
Score = 48.1 bits (115), Expect = 5e-06
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 54/230 (23%)
Query: 122 LGFLGGSEGLFAQ--KTLEVTKEILSTYKNQGGYDMLGRT---------------KDQIR 164
+G ++GL A+ + +E+ + + GG +LG T +D R
Sbjct: 39 IGIRDATQGLMARPPQYIELDLDQVDDLLRMGG-TILGTTNKGDPFAFPMPDGSLRD--R 95
Query: 165 TTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLK 224
+ E ++ +L LD L+ IGG S LA+ + +VG+P T++ D+
Sbjct: 96 SQEIIDGY----HSLGLDALIGIGGDGSLAILRRLAQ-----QGGINLVGIPKTIDNDVG 146
Query: 225 NQFVETNVGFDTICKVNSQLISNVCTDAL-----SAEKYYYFIRL--MGRRASHVALECT 277
E ++GFDT N+ T+AL +A + + L MGR A H+AL
Sbjct: 147 --ATEVSIGFDTA--------VNIATEALDRLHFTAASHNRVMILEVMGRDAGHIALAAG 196
Query: 278 LQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEG 327
+ + VIL E+ + + +C ++ R E+ KN ++++ E
Sbjct: 197 IAGGAD-VILIPEIPYT-------LENVCKKIRERQEEGKNFCLVVVSEA 238
>gnl|CDD|233884 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukaryotic type.
Members of this family are eukaryotic (with one
exception) ATP-dependent 6-phosphofructokinases (EC
2.7.1.11) in which two tandem copies of the
phosphofructokinase are found. Members are found, often
including several isozymes, in animals and fungi and in
the bacterium Propionibacterium acnes KPA171202 (a human
skin commensal).
Length = 746
Score = 40.8 bits (96), Expect = 0.002
Identities = 56/286 (19%), Positives = 118/286 (41%), Gaps = 26/286 (9%)
Query: 65 LAHFLRATAKVPDAQII-TEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKS-TLL 122
L FL + D +++ +E +R+ I+ G + G + A++ + T++
Sbjct: 367 LETFLFLSIPDDDKKLVPSEASRLRIAIIHVGAPAGGMNAAT---RSAVRYALARGHTVI 423
Query: 123 GFLGGSEGLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTA--CKNLN 180
G GL E+T + + +GG LG T R+ + A +
Sbjct: 424 AIHNGFSGLARHDVRELTWSDVEGWVGEGG-SELG-TN---RSLPGDDLGTIAYYFQQHK 478
Query: 181 LDGLVIIGGVTSNTDAAYLA---ETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTI 237
+DGL+IIGG + L E + + P V +P T++ ++ E ++G DT
Sbjct: 479 IDGLIIIGGFEAFEALYQLDAAREKYPAFRIPM--VVIPATISNNVPG--TEYSLGSDTA 534
Query: 238 CKVNSQLISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLT 297
++ N+ A ++++ + + MG + ++A L + + + EE ++
Sbjct: 535 LNEITEYCDNIKQSASASKRRVFVVETMGGYSGYLATMAGLATGADAAYIPEE----GIS 590
Query: 298 LFDLTKQICDAVQARAEQDKNHGVILLPEGLIESI--PEVYALLKE 341
L DL + I + ++ + + +IL E + + ++ E
Sbjct: 591 LKDLQEDI-EHLKETFAEGRAGKLILRNEKASKVYTTDFIARIISE 635
>gnl|CDD|180620 PRK06555, PRK06555, pyrophosphate--fructose-6-phosphate
1-phosphotransferase; Validated.
Length = 403
Score = 38.8 bits (91), Expect = 0.005
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 15/121 (12%)
Query: 117 PKSTLLGFLGGSEGLFAQKTLEVTKEILSTY---KNQGGYDM------LGRTKDQIR--- 164
P+ ++ + G +GL ++E+T + + GG + L D ++
Sbjct: 34 PEVEIIAYRSGYQGLLLGDSIEITPAVRANAGLLHRYGGSPIGNSRVKLTNVADCVKRGL 93
Query: 165 TTEQVNAALTACKNLNLDGLVI---IGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNG 221
E N A + L DG+ I IGG +NT AA LA AE VVG+P T++
Sbjct: 94 VKEGENPLKVAAERLAADGVDILHTIGGDDTNTTAADLAAYLAENGYDLTVVGLPKTIDN 153
Query: 222 D 222
D
Sbjct: 154 D 154
>gnl|CDD|200574 cd10950, CE4_BsYlxY_like, Putative catalytic NodB homology domain
of uncharacterized protein YlxY from Bacillus subtilis
and its bacterial homologs. The Bacillus subtilis
genome contains six polysaccharide deacetylase gene
homologs: pdaA, pdaB (previously known as ybaN), yheN,
yjeA, yxkH and ylxY. This family is represented by
Bacillus subtilis putative polysaccharide deacetylase
BsYlxY, encoded by the ylxY gene, which is a member of
the carbohydrate esterase 4 (CE4) superfamily. Although
its biological function still remains unknown, BsYlxY
shows high sequence homology to the catalytic domain of
Bacillus subtilis pdaB gene encoding a putative
polysaccharide deacetylase (BsPdaB), which is essential
for the maintenance of spores after the late stage of
sporulation and is highly conserved in spore-forming
bacteria. However, disruption of the ylxY gene in B.
subtilis did not cause any sporulation defect. Moreover,
the Asp residue in the classical His-His-Asp
zinc-binding motif of CE4 esterases is mutated to a Val
residue in this family. Other catalytically relevant
residues of CE4 esterases are also not conserved, which
suggest that members of this family may be inactive.
Length = 188
Score = 31.9 bits (73), Expect = 0.50
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 28/91 (30%)
Query: 103 NVVWG------LYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTYKNQG----- 151
NV WG + L+ H+ K+T FL G +A+K ++ ++I G
Sbjct: 13 NVAWGEEYLPAMLTILEKHDVKATF--FLEGR---WAKKNPDLVRKI----AKDGHEIGN 63
Query: 152 -GY---DML----GRTKDQIRTTEQVNAALT 174
GY D + +++IR T ++ +T
Sbjct: 64 HGYSHPDPSQLSYEQNREEIRKTNEIIEEIT 94
>gnl|CDD|225379 COG2823, OsmY, Predicted periplasmic or secreted lipoprotein
[General function prediction only].
Length = 196
Score = 30.4 bits (69), Expect = 1.6
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 14/70 (20%)
Query: 154 DMLGRTKDQIRTTEQVNAALTACKNLN--------LDGLVIIGGVTSNTDAAYLAETFAE 205
+ GR+ D T +V AAL N+ +G V + G+ + + A AE A
Sbjct: 122 SLGGRSNDT-WITTKVKAALLGDDNVKSSNIKVETENGEVYLSGLVDSQEEAERAEEIAS 180
Query: 206 AKCPTKVVGV 215
KV GV
Sbjct: 181 -----KVSGV 185
>gnl|CDD|219974 pfam08696, Dna2, DNA replication factor Dna2. Dna2 is a DNA
replication factor with single-stranded DNA-dependent
ATPase, ATP-dependent nuclease, ( 5'-flap endonuclease)
and helicase activities. It is required for Okazaki
fragment processing and is involved in DNA repair
pathways.
Length = 209
Score = 29.9 bits (68), Expect = 2.0
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 338 LLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLQPESDDSAQLSQIETEK 397
L K + L G D + ++ A+ + ++KK P S+ + E E
Sbjct: 123 LEKYLEELYLLGESQDEVREEVMEHLPAIEGWAEQYVKK----SPSSESISVSGTGEKET 178
Query: 398 L-LAHLVEVEMN 408
L ++ L+++E N
Sbjct: 179 LSISKLLDIEEN 190
>gnl|CDD|232852 TIGR00167, cbbA, ketose-bisphosphate aldolase. This model is under
revision. Proteins found by this model include
fructose-bisphosphate and tagatose-bisphosphate aldolase
[Energy metabolism, Glycolysis/gluconeogenesis].
Length = 288
Score = 30.0 bits (68), Expect = 2.5
Identities = 19/62 (30%), Positives = 23/62 (37%), Gaps = 9/62 (14%)
Query: 166 TEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLA--ETFAEAK---CPTKVVGVPVTLN 220
E +NA L A VII SN A Y+A + GVPV L+
Sbjct: 28 LETINAVLEAAAEEK--SPVIIQ--FSNGAAKYIAGLGAISAMVKAMSEAYPYGVPVALH 83
Query: 221 GD 222
D
Sbjct: 84 LD 85
>gnl|CDD|218696 pfam05692, Myco_haema, Mycoplasma haemagglutinin. This family
consists of several haemagglutinin sequences from
Mycoplasma synoviae and Mycoplasma gallisepticum. The
major plasma membrane proteins, pMGAs, of Mycoplasma
gallisepticum are cell adhesin (hemagglutinin)
molecules. It has been shown that the genetic
determinants that code for the haemagglutinins are
organised into a large family of genes and that only one
of these genes is predominately expressed in any given
strain.
Length = 437
Score = 30.4 bits (69), Expect = 2.6
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 146 TYKNQGGYDMLGRTKDQIRTTEQVNAALT-ACKNLNL-DGL--VIIGGVTSNTDAAYL 199
T ++ + LG T D TT ++ +T K L L GL ++I G T+N +A Y+
Sbjct: 372 TVLSKNNWTTLG-TFDTATTTTTNSSTVTNNKKTLTLKKGLNKIVISGGTNNGNAPYI 428
>gnl|CDD|184849 PRK14847, PRK14847, hypothetical protein; Provisional.
Length = 333
Score = 29.2 bits (65), Expect = 5.1
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 296 LTLFDLTKQICDAVQARAEQDKNHGVIL-LPEGLIESIPEVYA 337
L D +++CDAV A +I+ LP + S VYA
Sbjct: 183 LAELDFAREVCDAVSAIWGPTPQRKMIINLPATVESSTANVYA 225
>gnl|CDD|235405 PRK05320, PRK05320, rhodanese superfamily protein; Provisional.
Length = 257
Score = 28.8 bits (65), Expect = 5.5
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
Query: 284 MVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILL-PEGL-------IESIPEV 335
M I+ +AA K D + + V AR E G ILL PEG+ E+I
Sbjct: 1 MQIV--NIAAYKFVSLDDPETLRPLVLARCEALGLKGTILLAPEGINLFLAGTREAIDAF 58
Query: 336 YALLK 340
YA L+
Sbjct: 59 YAWLR 63
>gnl|CDD|226655 COG4192, COG4192, Signal transduction histidine kinase regulating
phosphoglycerate transport system [Signal transduction
mechanisms].
Length = 673
Score = 29.1 bits (65), Expect = 6.0
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 22/140 (15%)
Query: 222 DLKNQFVETNVGFDTIC--KVNSQLISNVC-TDALSAEKYYYFIRLMGRRASHVALECTL 278
L+++ VET TI + ++ + + DAL FI+++G+ AS V L
Sbjct: 213 SLRDRVVETQKLNSTIQLDQQHTAYLDLLANADAL-------FIQVLGQTASTVTLHQLS 265
Query: 279 ----------QSHPNMVILGEEVAASKLTLFDLTKQICDA--VQARAEQDKNHGVILLPE 326
SHP V +E+ A L +K++ +A A ++ + ++ +
Sbjct: 266 DELDAIGHNDLSHPITVDGRDEIGAQSEQLILYSKKVEEAFRTNALSQIGNSQQQLITCD 325
Query: 327 GLIESIPEVYALLKEIHSLL 346
G IES L + SL
Sbjct: 326 GQIESANPSAGALILLESLA 345
>gnl|CDD|224205 COG1286, CvpA, Uncharacterized membrane protein, required for
colicin V production [General function prediction only].
Length = 182
Score = 28.4 bits (64), Expect = 6.6
Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 8/78 (10%)
Query: 327 GLIESIPEVYALLKEIHSLLRQGVPV--DNISSQLSPWAS----ALFEFLPPFIKKQLLL 380
G + + + +L + + G D + S L P AL +LP +++
Sbjct: 106 GALRGVLILAIVLFFLAGI--TGFKDTPDWLQSSLYPLLLPPIEALQNYLPSSSVALIII 163
Query: 381 QPESDDSAQLSQIETEKL 398
S L + T+ L
Sbjct: 164 FHTPKLSNFLQNLWTQNL 181
>gnl|CDD|218013 pfam04298, Zn_peptidase_2, Putative neutral zinc metallopeptidase.
Zinc metallopeptidase zinc binding regions have been
predicted in some family members by a pattern match
(Prosite:PS00142).
Length = 222
Score = 28.6 bits (65), Expect = 6.9
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 9/44 (20%)
Query: 336 YALLKEIHSLLRQG-VPVDNISSQLSPW---ASALFEFLPPFIK 375
YA L LR VPV NI S LS L P +
Sbjct: 107 YAPLV-----LRSALVPVVNIGSNLSWILFIIGLLLGLGPTLLL 145
>gnl|CDD|182652 PRK10693, PRK10693, response regulator of RpoS; Provisional.
Length = 303
Score = 28.8 bits (65), Expect = 7.3
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 14/48 (29%)
Query: 315 QDKNHGVI-----------LLPEGLIE---SIPEVYALLKEIHSLLRQ 348
+ ++GV+ LL E L +PE+ ALLK+++ LLRQ
Sbjct: 173 RAGDNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQ 220
>gnl|CDD|237600 PRK14072, PRK14072, 6-phosphofructokinase; Provisional.
Length = 416
Score = 28.7 bits (65), Expect = 8.2
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 14/89 (15%)
Query: 398 LLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGS--LPSKFDCDYAYVLGHICYHI 455
+LA+L++ ++ K++ Y R + + SK D + AY +G
Sbjct: 276 VLANLIKEKLGKKVHWAV------------LDYLQRAARHIASKTDVEEAYAVGKAAVEY 323
Query: 456 LAAGLNGYMATVTNLKNPANKWRCGAAPI 484
AG NG M + + KW+ G P+
Sbjct: 324 ALAGKNGVMPAIRRTSDDPYKWKIGLVPL 352
>gnl|CDD|213733 TIGR02720, pyruv_oxi_spxB, pyruvate oxidase. Members of this
family are examples of pyruvate oxidase (EC 1.2.3.3), an
enzyme with FAD and TPP as cofactors that catalyzes the
reaction pyruvate + phosphate + O2 + H2O = acetyl
phosphate + CO2 + H2O2. It should not be confused with
pyruvate dehydrogenase [cytochrome] (EC 1.2.2.2) as in
E. coli PoxB, although the E. coli enzyme is closely
homologous and has pyruvate oxidase as an alternate name
[Energy metabolism, Aerobic].
Length = 575
Score = 28.6 bits (64), Expect = 8.6
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 88 RVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLG 123
++G+ F G PG +++ GLYDA + H P L+G
Sbjct: 63 KIGVCF-GSAGPGATHLLNGLYDAKEDHVPVLALVG 97
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.320 0.136 0.403
Gapped
Lambda K H
0.267 0.0757 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 25,004,362
Number of extensions: 2427312
Number of successful extensions: 2333
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2277
Number of HSP's successfully gapped: 48
Length of query: 494
Length of database: 10,937,602
Length adjustment: 101
Effective length of query: 393
Effective length of database: 6,457,848
Effective search space: 2537934264
Effective search space used: 2537934264
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (27.2 bits)