Citrus Sinensis ID: 011088

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490----
Protein Sequence
MHNPQNESRRRKRIISFLQNHSSFSPKIKMMPSRTLTPSALKNSILLFSFLLIIYLFFYYPSLHAPPRLLSSHVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLSLHHLDAIDPIFPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFTSWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHNNSVQSNYVKHVVGNCARADVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTYNESMNIKIRQCGGNELISMHF
Secondary Structure (PSIPRED)
ccccccccHHcccccHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEcccccHHHHHHHHHHHcccccccEEEEEccccccccccccccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEcccEEEEHHHHHHHHccccccccEEEEEccccccccccccccccccccEEEEcHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccEEccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEEcccccEEEEEEEEEEEEEEccccccHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEEEEEEccccEEEEEEEccccccccHHHHccccEEEEEEccccccHHHHccccccccccccccccEEEEEEEEEccccEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccccHccccccHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHccccccEEEEEccccccccccccccccEEEcccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEEccccEEccHHHHHHHHHcccccEEEEEcccccHHHHEEcccccccccHHHHEcHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccccEEEccccHHHHHHccccccEEEEccHHccccccccccHHHHHHHHHHHHccccHHHHHEEEEEccccEEEEEEEEEEEEEEEcccccHHHHccHHHHHHHHHccccccccccccccccccccccccEEEEEEcEcccccEEEEEEEEEccccccccccccccEEEEEEEccccccHHHccccccHccEEEcccccEEEEEEEEcccccEEEEcc
Coil and Loop (DISEMBL)
mhnpqnesRRRKRIISFLqnhssfspkikmmpsrtltpsaLKNSILLFSFLLIIYLFFyypslhapprllsshvvtanpltrRHLLFSIAssssswprrrSYVRlwyspnstrALTFLdraadsssagdpslprivisadtskfpftfpkgLRSAVRVARVVKEAVdltdekagvrwfvfgdddtvFFVDNLVKTLskydddrwfyvgsnsegyeqnakhsfgmafggggfAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVElgvgltpepgfhqldmrgdmfgmlsahplspllslhhldaidpifpnmnRTQALQHLFKavnvdparilqqtvcydqssqlTVSVAWGFAVQVYEGNQLLPDLLSLQRTftswrrgsnveshfmfnlrdyprdpckrpIVFFLESVLSHNNSVQSNYVKHvvgncaradVVRKIEKIRVFSEKLELDveemksprrqccdifptynesmnikirqcggnelismhf
Flexible Loop (DISEMBL)
mhnpqnesrrrKRIISFlqnhssfspkikmmpSRTLTPSALKNSILLFSFLLIIYLFFYYPSLHAPPRLLSSHVVTANPLTRRHLLFSiassssswprrrSYVRLWYSPNSTRALTFLDRAAdsssagdpslprIVISadtskfpftfpkglrsaVRVARVVKEavdltdekagvrwfvfgdddtvFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLSLHHLDAIDPIFPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFTswrrgsnveshFMFNLRDYPRDPCKRPIVFFLESVLSHNNSVQSNYVKHVVGNCARADVVRKIEKIRVFSekleldveemksprrqcCDIFPTYNESMNIKIRQcggnelismhf
Low Complexity Region (SEG)
MHNPQNESRRRKRIISFLQNHSSFSPKIKMMPSRTLTPSALKNsillfsflliiylffyypslHAPPRLLSSHVVTANPLTRRHLLFsiassssswprrrsyvrLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLrsavrvarvvkeavDLTDEKAGVRWfvfgdddtvffvdNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSfgmafggggfaISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMlsahplspllslhhlDAIDPIFPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFTSWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHNNSVQSNYVKHVVGNCARADVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTYNESMNIKIRQCGGNELISMHF
Disordered region (IsUnstruct)
***************************************ALKNSILLFSFLLIIYLFFYYPSLHAPPRLLSSHVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFL***************RIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLSLHHLDAIDPIFPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFTSWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHNNSVQSNYVKHVVGNCARADVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTYNESMNIKIRQCGGN*******
Disordered Region (DISOPRED)
******************************MPSRTLTPSALKNSILLFSFLLIIYLFFYYPS*********************HLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLSLHHLDAIDPIFPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFTSWRRGSNVESHFMFNLRDY**DPCKRPIVFFLESVLSHNNSVQSNYVKHVVGNCARADVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTYNESMNIKIRQCGGNELISMHF
Disordered Region (DISEMBL)
**********RKRIISFLQNHSSFSPKIKMMPSRTLTPSALKNSILLFSFLLIIYLFFYYPSLHAPPRLLSSHVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDR*********PSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLSLHHLDAIDPIFPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFTSWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHNNSVQSNYVKHVVGNCARADVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTYNESMNIKIRQCGGNELISMHF
Disordered Region (DISPRO)
**************ISFLQNHSSFSPKIKMMPSRTLTPSALKNSILLFSFLLIIYLFFYYPSLHA*************PLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLSLHHLDAIDPIFPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFTSWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHNNSVQSNYVKHVVGNCARADVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTYNESMNIKIRQCGGNELISMHF
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHNPQNESRRRKRIISFLQNHSSFSPKIKMMPSRTLTPSALKNSILLFSFLLIIYLFFYYPSLHAPPRLLSSHVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLSLHHLDAIDPIFPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFTSWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHNNSVQSNYVKHVVGNCARADVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTYNESMNIKIRQCGGNELISMHF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	494
449453676	487	PREDICTED: uncharacterized protein LOC10	0.912	0.926	0.623	1e-171
297800668	488	hypothetical protein ARALYDRAFT_493365 [	0.975	0.987	0.599	1e-169
359485673	455	PREDICTED: uncharacterized protein LOC10	0.880	0.956	0.658	1e-167
224132986	479	predicted protein [Populus trichocarpa]	0.829	0.855	0.665	1e-163
30683185	488	uncharacterized protein [Arabidopsis tha	0.975	0.987	0.601	1e-162
356544838	492	PREDICTED: uncharacterized protein LOC10	0.831	0.835	0.668	1e-160
2244882	520	hypothetical protein [Arabidopsis thalia	0.975	0.926	0.564	1e-157
147842358	1587	hypothetical protein VITISV_043112 [Viti	0.811	0.252	0.651	1e-151
225447350	468	PREDICTED: uncharacterized protein LOC10	0.850	0.897	0.526	1e-132
255549331	476	transferase, transferring glycosyl group	0.921	0.955	0.516	1e-130

>gi|449453676|ref|XP_004144582.1| PREDICTED: uncharacterized protein LOC101222721 [Cucumis sativus] gi|449493205|ref|XP_004159221.1| PREDICTED: uncharacterized protein LOC101223399 [Cucumis sativus]

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 285/457 (62%), Positives = 363/457 (79%), Gaps = 6/457 (1%)

Query: 39  SALKNSILLFSFLLIIYLFFYYPSLHAPPRLLSSHVVTANPLTRRHLLFSIASSSSSWPR 98
           S  K  +LL S   I+Y  F+  +  +    L     T +P TRRH++F+IASSS+SW R
Sbjct: 36  STAKTLLLLLSAAFIVYTLFF--NSSSHSPSLLCSSSTLSPTTRRHIVFAIASSSNSWSR 93

Query: 99  RRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRV 158
           R+ YVRLWY  NSTRA  F+DR A   ++ DPS+P +++S DTS+FP+TF  GLRSA+RV
Sbjct: 94  RKPYVRLWYDRNSTRAFAFVDRIAPDFASADPSVPPVIVSNDTSRFPYTFRGGLRSAIRV 153

Query: 159 ARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNA 218
           ARVVKE V+  ++   VRW+VFGDDDT+FFV+NLV TL KYD +RW+Y+GSNSE Y QN 
Sbjct: 154 ARVVKEIVERNEQD--VRWYVFGDDDTLFFVENLVNTLGKYDHERWYYIGSNSESYGQNL 211

Query: 219 KHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPG 278
           K+SF MAFGGGGFAISHSLARVLAG LDSCL RY HLYGSDAR++SCLVELGVGLT EPG
Sbjct: 212 KNSFDMAFGGGGFAISHSLARVLAGVLDSCLTRYGHLYGSDARIWSCLVELGVGLTHEPG 271

Query: 279 FHQLDMRGDMFGMLSAHPLSPLLSLHHLDAIDPIFPNMNRTQALQHLFKAVNVDPARILQ 338
           FHQ+DMRG++ G+LSAH LSP++SLHHLDA+DPIFPNMN TQAL HLF+AVNVDP R+ Q
Sbjct: 272 FHQVDMRGNLLGLLSAHALSPIVSLHHLDAMDPIFPNMNNTQALYHLFEAVNVDPGRVFQ 331

Query: 339 QTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFTSWRRGSNVESH-FMFNLRD 397
           Q VCYD+S  LT+SV+WGFA+QV+EGN+LLPDLLSLQRTFTSWRR + ++++ ++FN+R+
Sbjct: 332 QIVCYDRSHSLTISVSWGFAIQVFEGNRLLPDLLSLQRTFTSWRRAATIDANRYLFNMRE 391

Query: 398 YPRDPCKRPIVFFLESVLSHNNSVQSNYVKHVVGNCARADVVRKIEKIRVFSEKLELDVE 457
           YP+DPCKR I +     +S NN++ +NY + +V +C  +  ++ + +IRVFS+KLELDVE
Sbjct: 392 YPKDPCKRNIFYMQNLRISKNNAL-TNYTRKMVTDCPASGAIKNLTQIRVFSQKLELDVE 450

Query: 458 EMKSPRRQCCDIFPTYNESMNIKIRQCGGNELISMHF 494
           EMK+PRRQCCDI  +  ESM ++IRQCG  ELI+M+F
Sbjct: 451 EMKAPRRQCCDIISSSKESMLLEIRQCGVEELIAMYF 487

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800668|ref|XP_002868218.1| hypothetical protein ARALYDRAFT_493365 [Arabidopsis lyrata subsp. lyrata] gi|297314054|gb|EFH44477.1| hypothetical protein ARALYDRAFT_493365 [Arabidopsis lyrata subsp. lyrata]

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 295/492 (59%), Positives = 375/492 (76%), Gaps = 10/492 (2%)

Query: 6   NESRRRKRIISFLQNHSSFSPKIKMMPSRT--LTPSALKNSILLFSFLLIIYLFFYYPSL 63
           N++RR++R    L    S SP++ + P+++  LT S ++   LL +F  IIY+ F Y + 
Sbjct: 2   NQTRRKRRPDPSLSRLDSLSPEM-LFPAKSPSLTSSRIRYIFLLLTFCFIIYIIFSYGTT 60

Query: 64  HAPPRLLS-SHVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAA 122
               ++ S +  ++     RRHLLFSIA+S  SW RR SYVRLWYSP STRA+ FLDR  
Sbjct: 61  FRREQISSIARSLSVFSTRRRHLLFSIAASHDSWLRRSSYVRLWYSPESTRAVVFLDRGG 120

Query: 123 DSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGD 182
             S   D +LP +++S D S+FP+ FP GLRSA+RVARVVKE VDL D+   VRWFVFGD
Sbjct: 121 LES---DLTLPPVIVSKDVSRFPYNFPGGLRSAIRVARVVKETVDLGDKD--VRWFVFGD 175

Query: 183 DDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLA 242
           DDTVFFVDNLV  LSKYD  +W+YVGSNSE Y+QN ++SF MAFGGGGFAIS SLA+VLA
Sbjct: 176 DDTVFFVDNLVTVLSKYDHRKWYYVGSNSEFYDQNVRYSFDMAFGGGGFAISASLAKVLA 235

Query: 243 GALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLS 302
             LDSCLMRY+H+YGSD+R+FSC+ ELGV LT EPGFHQ+D+RG++FG+L AHPLSPL+S
Sbjct: 236 KVLDSCLMRYSHMYGSDSRIFSCVAELGVTLTHEPGFHQIDVRGNIFGLLCAHPLSPLVS 295

Query: 303 LHHLDAIDPIFPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVY 362
           LHHLDA+DP FP  NRT+++ HL  A + D ARILQQ+VCYD  + +TVSV WG+AVQVY
Sbjct: 296 LHHLDAVDPFFPKRNRTESVAHLIGAASFDSARILQQSVCYDSLNTVTVSVVWGYAVQVY 355

Query: 363 EGNQLLPDLLSLQRTFTSWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHNN-SV 421
           EGN+LLPDLL+LQ+TF++WRRGS V+S++MF+ R+YPRDPC RP+VFFL+SV S      
Sbjct: 356 EGNKLLPDLLTLQKTFSTWRRGSGVQSNYMFSTREYPRDPCGRPLVFFLDSVGSDGTEGT 415

Query: 422 QSNYVKHVVGNCARADVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTYNESMNIKI 481
            SNY  H VGNC RA+ V ++E++RV S KL+ DVE+M +PRRQCCDI   YN+SM I I
Sbjct: 416 WSNYNLHRVGNCHRAEAVERLERVRVLSRKLKHDVEQMVAPRRQCCDISSPYNKSMVINI 475

Query: 482 RQCGGNELISMH 493
           RQC  +ELI+M+
Sbjct: 476 RQCMPDELIAMN 487

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485673|ref|XP_002274405.2| PREDICTED: uncharacterized protein LOC100246569 [Vitis vinifera]

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 291/442 (65%), Positives = 357/442 (80%), Gaps = 7/442 (1%)

Query: 55  YLFFYYPSLHAPPRLLSS-HVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTR 113
           YL  + P  + P  LLS+ H     P +  HLLFSIASS+ S  RR  Y+RLW   NS R
Sbjct: 19  YLLLHVPPPYLPQSLLSTPHEAAPLPTSSHHLLFSIASSAGSLGRRAPYLRLW--SNSAR 76

Query: 114 ALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKA 173
           A+ FLD       +   +LP IV+S DTS+FP+TF +GL SAVRVAR++KEAVD    ++
Sbjct: 77  AILFLDSPPPPDPSF-AALPPIVLSGDTSRFPYTFRRGLPSAVRVARIIKEAVD--RNES 133

Query: 174 GVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAI 233
            +RWFVFGDDDTVFFVDNLV+TLSKYD D+WFY+GS+SE YEQN  +SF MAFGGGGFA+
Sbjct: 134 DIRWFVFGDDDTVFFVDNLVRTLSKYDHDQWFYIGSSSESYEQNESNSFDMAFGGGGFAL 193

Query: 234 SHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLS 293
           SHSLAR LAG  DSCLMRY HL+GSDAR+FSCL ELGVGLT EPGFHQ+D+RG++FGMLS
Sbjct: 194 SHSLARALAGVFDSCLMRYPHLFGSDARIFSCLAELGVGLTHEPGFHQVDIRGNLFGMLS 253

Query: 294 AHPLSPLLSLHHLDAIDPIFPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSV 353
           AHPLSPL+SLHHLD++DPIFPN NRTQAL+HLF+AVN+DPARILQQT+CYD+ S LT+SV
Sbjct: 254 AHPLSPLVSLHHLDSVDPIFPNRNRTQALEHLFEAVNIDPARILQQTICYDRLSSLTISV 313

Query: 354 AWGFAVQVYEGNQLLPDLLSLQRTFTSWRRGSNVE-SHFMFNLRDYPRDPCKRPIVFFLE 412
           AWGF++QV+EGN LLPDLL LQRTFT WRRG N+  S +MFN R+YP+DPCKRP+VFFL+
Sbjct: 314 AWGFSIQVFEGNLLLPDLLPLQRTFTPWRRGRNISLSRYMFNTREYPKDPCKRPVVFFLQ 373

Query: 413 SVLSHNNSVQSNYVKHVVGNCARADVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPT 472
           SV S+++ V SNY +H VGNC +   ++ +E+IRV S+KLEL++E+MK+PRRQCC IFP 
Sbjct: 374 SVGSNHDGVWSNYTRHAVGNCGQTGAIKNLEQIRVLSQKLELNIEQMKAPRRQCCSIFPQ 433

Query: 473 YNESMNIKIRQCGGNELISMHF 494
           +N+SM + IRQCG +ELISMH 
Sbjct: 434 FNKSMVLSIRQCGVDELISMHL 455

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224132986|ref|XP_002327928.1| predicted protein [Populus trichocarpa] gi|222837337|gb|EEE75716.1| predicted protein [Populus trichocarpa]

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 279/419 (66%), Positives = 341/419 (81%), Gaps = 9/419 (2%)

Query: 82  RRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAA------DSSSAGDPSLPRI 135
           RRH++FSIASSS+S+  R+ Y+RLWY+P +TRA  FLDR        ++ S  DP+LP +
Sbjct: 62  RRHIVFSIASSSTSFIHRQPYIRLWYNPTTTRAFAFLDREVVDPTGNNNRSVIDPTLPPV 121

Query: 136 VISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKT 195
           +IS DTS FP+TF  GL+SA+RVARVVKE V+L +    V WFVFGDDDTVFFV+NLV  
Sbjct: 122 IISKDTSSFPYTFKGGLKSAIRVARVVKEVVELNEPD--VDWFVFGDDDTVFFVENLVTV 179

Query: 196 LSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHL 255
           LSKYD + WFYVGSNSE Y QN K+SF M FGGGGFAIS+SLA+VLA  LDSCL+RYAHL
Sbjct: 180 LSKYDHNGWFYVGSNSESYSQNVKNSFEMGFGGGGFAISYSLAKVLARVLDSCLVRYAHL 239

Query: 256 YGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLSLHHLDAIDPIFPN 315
           YGSDAR+FSCL ELGVGL+ EPGFHQ+DMRGD+FGMLSAHPLSPL+SLHHLDA++PIFP 
Sbjct: 240 YGSDARIFSCLAELGVGLSHEPGFHQVDMRGDLFGMLSAHPLSPLVSLHHLDAVNPIFPK 299

Query: 316 MNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQ 375
           M++TQAL+HLF  VNVDPARILQQTVCYD    LTVSVAWG++VQV+EGN+ LPDLL+ Q
Sbjct: 300 MSKTQALEHLFNGVNVDPARILQQTVCYDPVYSLTVSVAWGYSVQVFEGNEFLPDLLTPQ 359

Query: 376 RTFTSWRRGSNVE-SHFMFNLRDYPRDPCKRPIVFFLESVLSHNNSVQSNYVKHVVGNCA 434
           RTF  WRRG N E + FMFN+R+YP+DPCKRP+VFF+ESV S  N + SNY++H V +C 
Sbjct: 360 RTFIPWRRGGNAEFNRFMFNIREYPKDPCKRPVVFFMESVTSGKNGIWSNYIRHDVADCN 419

Query: 435 RADVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTYNESMNIKIRQCGGNELISMH 493
           R   ++ +E +RV S+KLE D+E+MK+PRRQCCD+ P +N SM I IR+CG +ELI+MH
Sbjct: 420 RGYAMKNLELVRVLSQKLEPDIEQMKAPRRQCCDLSPLFNGSMVISIRKCGSDELIAMH 478

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30683185|ref|NP_193259.2| uncharacterized protein [Arabidopsis thaliana] gi|332658175|gb|AEE83575.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 296/492 (60%), Positives = 373/492 (75%), Gaps = 10/492 (2%)

Query: 6   NESRRRKRIISFLQNHSSFSPKIKMMPSRT--LTPSALKNSILLFSFLLIIYLFFYYPSL 63
           N++RR++R  S L    S SP++ + P+++  LT S ++N  LL  F  IIY+ F Y + 
Sbjct: 2   NQTRRKRRPDSSLSRLDSLSPEM-LFPAKSPSLTSSRIRNIFLLLIFCFIIYIIFSYGTN 60

Query: 64  HAPPRLLS-SHVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAA 122
               ++ S +  ++     RRHLLFSIA+S  SW RR SYVRLWYSP STRA+ FLDR  
Sbjct: 61  FRREQISSIARSLSVFSTRRRHLLFSIAASHDSWLRRSSYVRLWYSPESTRAVVFLDRGG 120

Query: 123 DSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGD 182
             S   D +LP +++S D S+FP+ FP GLRSA+RVARVVKE VD  D+   VRWFVFGD
Sbjct: 121 LES---DLTLPPVIVSKDVSRFPYNFPGGLRSAIRVARVVKETVDRGDKD--VRWFVFGD 175

Query: 183 DDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLA 242
           DDTVFFVDNLV  LSKYD  +WFYVGSNSE Y+QN ++SF MAFGGGGFAIS SLA+VLA
Sbjct: 176 DDTVFFVDNLVTVLSKYDHRKWFYVGSNSEFYDQNVRYSFDMAFGGGGFAISASLAKVLA 235

Query: 243 GALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLS 302
             LDSCLMRY+H+YGSD+R+FSC+ ELGV LT EPGFHQ+D+RG++FG+L AHPLSPL+S
Sbjct: 236 KVLDSCLMRYSHMYGSDSRIFSCVAELGVTLTHEPGFHQIDVRGNIFGLLCAHPLSPLVS 295

Query: 303 LHHLDAIDPIFPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVY 362
           LHHLDA+DP FP  NRT+++ HL  A + D  RILQQ+VCYD  + +TVSV WG+AVQVY
Sbjct: 296 LHHLDAVDPFFPKRNRTESVAHLIGAASFDSGRILQQSVCYDSLNTVTVSVVWGYAVQVY 355

Query: 363 EGNQLLPDLLSLQRTFTSWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHNN-SV 421
           EGN+LLPDLL+LQ+TF++WRRGS V+S++MF+ R+YPRDPC RP+VFFL+SV S      
Sbjct: 356 EGNKLLPDLLTLQKTFSTWRRGSGVQSNYMFSTREYPRDPCGRPLVFFLDSVGSDGTEGT 415

Query: 422 QSNYVKHVVGNCARADVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTYNESMNIKI 481
            SNY  H VG+C RA+ V ++E+IRV S KLE +VE+M  PRRQCCDI   YN+SM I I
Sbjct: 416 WSNYNIHRVGHCHRAEAVERLERIRVLSPKLERNVEQMGLPRRQCCDISSPYNKSMVINI 475

Query: 482 RQCGGNELISMH 493
           RQC  +ELI+M+
Sbjct: 476 RQCMPDELIAMN 487

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544838|ref|XP_003540854.1| PREDICTED: uncharacterized protein LOC100813277 [Glycine max]

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 278/416 (66%), Positives = 342/416 (82%), Gaps = 5/416 (1%)

Query: 78  NPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVI 137
           +P TRRHLLFS+ASSS+SWPRR  Y+ LWYSP +TRAL FLD+   ++++ D S P +VI
Sbjct: 81  SPTTRRHLLFSVASSSTSWPRRLPYINLWYSPATTRALAFLDKTPPNATSADDSSPPLVI 140

Query: 138 SADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLS 197
           S DTS FP+TF  GLRSA+RVAR VKEAVD  +    VRWFVFGDDDTVFFVDN+V+ L+
Sbjct: 141 SGDTSSFPYTFRGGLRSAIRVARAVKEAVDRNE--TDVRWFVFGDDDTVFFVDNVVRALA 198

Query: 198 KYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYG 257
           +YD  +WFYVGSNSE YEQN K+SF MAFGGGGFAIS+SLARVLA  LDSCL RY HLYG
Sbjct: 199 RYDHSKWFYVGSNSESYEQNVKYSFEMAFGGGGFAISYSLARVLARVLDSCLRRYGHLYG 258

Query: 258 SDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLSLHHLDAIDPIFPNMN 317
           SD+R++SC+ ELGV LT EPGFHQLDMRG++FGML+AHPLSPLLSLHHL++++P+FP+MN
Sbjct: 259 SDSRIYSCIAELGVALTHEPGFHQLDMRGNLFGMLAAHPLSPLLSLHHLESVEPLFPDMN 318

Query: 318 RTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRT 377
           R QAL+HL  A NVDPARILQQTVCYD+S+ LT SV+WGFA+QVY+GN+LLPDLLSLQRT
Sbjct: 319 RVQALEHLIAAANVDPARILQQTVCYDRSNSLTFSVSWGFAIQVYQGNELLPDLLSLQRT 378

Query: 378 FTSWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHNNSVQSNYVKHVVGNCARAD 437
           F  W+RGS V ++FMFN RDYPRDPCKRP +FF +SV S    + SNY  HVVGNC  + 
Sbjct: 379 FVPWKRGSKVNANFMFNTRDYPRDPCKRPSIFFFKSVASDKRGIWSNYSGHVVGNCFEST 438

Query: 438 VVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTYNESMNIKIRQCGGNELISMH 493
           ++++I    VFS+KLEL+ E+M +PRRQCC++  T N+++++ IRQC  +ELISM 
Sbjct: 439 LLKQII---VFSKKLELNNEQMIAPRRQCCNVLLTSNDTVSLHIRQCELDELISMQ 491

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2244882|emb|CAB10303.1| hypothetical protein [Arabidopsis thaliana] gi|7268271|emb|CAB78566.1| hypothetical protein [Arabidopsis thaliana]

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 296/524 (56%), Positives = 373/524 (71%), Gaps = 42/524 (8%)

Query: 6   NESRRRKRIISFLQNHSSFSPKIKMMPSRT--LTPSALKNSILLFSFLLIIYLFFYYPSL 63
           N++RR++R  S L    S SP++ + P+++  LT S ++N  LL  F  IIY+ F Y + 
Sbjct: 2   NQTRRKRRPDSSLSRLDSLSPEM-LFPAKSPSLTSSRIRNIFLLLIFCFIIYIIFSYGTN 60

Query: 64  HAPPRLLS-SHVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAA 122
               ++ S +  ++     RRHLLFSIA+S  SW RR SYVRLWYSP STRA+ FLDR  
Sbjct: 61  FRREQISSIARSLSVFSTRRRHLLFSIAASHDSWLRRSSYVRLWYSPESTRAVVFLDRGG 120

Query: 123 DSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGD 182
             S   D +LP +++S D S+FP+ FP GLRSA+RVARVVKE VD  D+   VRWFVFGD
Sbjct: 121 LES---DLTLPPVIVSKDVSRFPYNFPGGLRSAIRVARVVKETVDRGDKD--VRWFVFGD 175

Query: 183 DDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLA 242
           DDTVFFVDNLV  LSKYD  +WFYVGSNSE Y+QN ++SF MAFGGGGFAIS SLA+VLA
Sbjct: 176 DDTVFFVDNLVTVLSKYDHRKWFYVGSNSEFYDQNVRYSFDMAFGGGGFAISASLAKVLA 235

Query: 243 GALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLS 302
             LDSCLMRY+H+YGSD+R+FSC+ ELGV LT EPGFHQ+D+RG++FG+L AHPLSPL+S
Sbjct: 236 KVLDSCLMRYSHMYGSDSRIFSCVAELGVTLTHEPGFHQIDVRGNIFGLLCAHPLSPLVS 295

Query: 303 LHHLDAIDPIFPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVY 362
           LHHLDA+DP FP  NRT+++ HL  A + D  RILQQ+VCYD  + +TVSV WG+AVQVY
Sbjct: 296 LHHLDAVDPFFPKRNRTESVAHLIGAASFDSGRILQQSVCYDSLNTVTVSVVWGYAVQVY 355

Query: 363 EGNQLLPDLLSLQRTFTSWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHNN-SV 421
           EGN+LLPDLL+LQ+TF++WRRGS V+S++MF+ R+YPRDPC RP+VFFL+SV S      
Sbjct: 356 EGNKLLPDLLTLQKTFSTWRRGSGVQSNYMFSTREYPRDPCGRPLVFFLDSVGSDGTEGT 415

Query: 422 QSNYVKHVVGNCARADVVRKIEKIRVFSEKLELDVE------------------------ 457
            SNY  H VG+C RA+ V ++E+IRV S KLE +VE                        
Sbjct: 416 WSNYNIHRVGHCHRAEAVERLERIRVLSPKLERNVEQVGFINTDRFSVKVPSILPGFTFF 475

Query: 458 --------EMKSPRRQCCDIFPTYNESMNIKIRQCGGNELISMH 493
                   +M  PRRQCCDI   YN+SM I IRQC  +ELI+M+
Sbjct: 476 FGFLKIKCQMGLPRRQCCDISSPYNKSMVINIRQCMPDELIAMN 519

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147842358|emb|CAN76207.1| hypothetical protein VITISV_043112 [Vitis vinifera]

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 266/408 (65%), Positives = 328/408 (80%), Gaps = 7/408 (1%)

Query: 55  YLFFYYPSLHAPPRLLSS-HVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTR 113
           YL  + P  + P  LLS+ H     P +  HLLFSIASS+ S  RR  Y+RLW   NS R
Sbjct: 19  YLLLHVPPPYLPQSLLSTPHEAAPLPTSSHHLLFSIASSAGSLGRRAPYLRLW--SNSAR 76

Query: 114 ALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKA 173
           A+ FLD       +   +LP IV+S DTS+FP+TF +GL SAVRVAR++KEAVD  +  +
Sbjct: 77  AILFLDSPPPPDPSF-AALPPIVLSGDTSRFPYTFRRGLPSAVRVARIIKEAVDRNE--S 133

Query: 174 GVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAI 233
            +RWFVFGDDDTVFFVDNLV+TLSKYD D+WFY+GS+SE YEQN  +SF MAFGGGGFA+
Sbjct: 134 DIRWFVFGDDDTVFFVDNLVRTLSKYDHDQWFYIGSSSESYEQNESNSFDMAFGGGGFAL 193

Query: 234 SHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLS 293
           SHSLAR LAG  DSCLMRY HL+GSDAR+FSCL ELGVGLT EPGFHQ+D+RG++FGMLS
Sbjct: 194 SHSLARALAGVFDSCLMRYPHLFGSDARIFSCLAELGVGLTHEPGFHQVDIRGNLFGMLS 253

Query: 294 AHPLSPLLSLHHLDAIDPIFPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSV 353
           AHPLSPL+SLHHLD++DPIFPNMNRTQAL+HLF+AVN+DPARILQQT+CYD+ S LT+SV
Sbjct: 254 AHPLSPLVSLHHLDSVDPIFPNMNRTQALEHLFEAVNIDPARILQQTICYDRLSSLTISV 313

Query: 354 AWGFAVQVYEGNQLLPDLLSLQRTFTSWRRGSNVE-SHFMFNLRDYPRDPCKRPIVFFLE 412
           AWGF++QV++GN LLPDLL LQRTFT WRRG N+  S +MFN R+YP+DPCKRP+VFFL+
Sbjct: 314 AWGFSIQVFKGNLLLPDLLPLQRTFTPWRRGRNISLSRYMFNTREYPKDPCKRPVVFFLQ 373

Query: 413 SVLSHNNSVQSNYVKHVVGNCARADVVRKIEKIRVFSEKLELDVEEMK 460
            V S+++ V SNY +H VGNC +   ++ +E+IRV S+KLEL++E+ K
Sbjct: 374 XVGSNHDGVWSNYTRHAVGNCGQTGAIKNLEQIRVLSQKLELNIEQEK 421

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447350|ref|XP_002274436.1| PREDICTED: uncharacterized protein LOC100241450 [Vitis vinifera]

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 225/427 (52%), Positives = 307/427 (71%), Gaps = 7/427 (1%)

Query: 71  SSHVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDR--AADSSSAG 128
           SS  V+A P +  HL+F IAS+  SW  +++YV+ W+ P   R   F+D     +SS   
Sbjct: 45  SSQGVSA-PTSLEHLVFGIASNQDSWLEKKNYVKHWWKPQQMRGCVFVDSMPGNESSYND 103

Query: 129 DPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFF 188
             SLP + IS DTS+F +T+  GL SA+RVARVV E V L    +GVRWFVFGDDDT+FF
Sbjct: 104 SSSLPPVCISEDTSQFRYTYRHGLPSAIRVARVVPETVALN--HSGVRWFVFGDDDTIFF 161

Query: 189 VDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSC 248
            +NLVKTLSKYD + W+Y+G+NSE YEQN   SF MAFGG GFAIS+ LA+VLA   DSC
Sbjct: 162 PENLVKTLSKYDHELWYYIGTNSEIYEQNRLFSFDMAFGGAGFAISYPLAKVLAKVFDSC 221

Query: 249 LMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLSLHHLDA 308
           L RY HLYGSD+RV++CL ELGVGLT EPGFHQ+D+RG+ FG+L+AHPL+PL+S HHLD 
Sbjct: 222 LERYPHLYGSDSRVYTCLAELGVGLTREPGFHQVDVRGETFGLLAAHPLAPLVSFHHLDH 281

Query: 309 IDPIFPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLL 368
           +DPIFPNM   QA++HLF+AV VD  R+LQQTVCYD+    T+SV+WG+AVQV+E +Q L
Sbjct: 282 VDPIFPNMTANQAIEHLFEAVKVDSERVLQQTVCYDRWFSWTISVSWGYAVQVFENHQFL 341

Query: 369 PDLLSLQRTFTSWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHNNSVQSNYVKH 428
           PD+L  ++TF  W++GS +   + FN R+   DPC+RP +FF++SV S  + ++S+Y + 
Sbjct: 342 PDVLRARKTFRQWKKGSVLSESYTFNTRELHIDPCRRPTIFFMDSVSSGRDGIESSYRRD 401

Query: 429 VVGNCA-RADVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTYNES-MNIKIRQCGG 486
               C       +++E+I+VFS KL+L ++++++PRR CCD+ P+   + + + IR+C  
Sbjct: 402 ASDGCTLHMASPKRLEEIKVFSHKLDLKIKQLQAPRRHCCDVLPSSQGNVLELAIRECKE 461

Query: 487 NELISMH 493
            ELI +H
Sbjct: 462 EELIHIH 468

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549331|ref|XP_002515719.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223545156|gb|EEF46666.1| transferase, transferring glycosyl groups, putative [Ricinus communis]

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 241/467 (51%), Positives = 316/467 (67%), Gaps = 12/467 (2%)

Query: 32  PSRTLTPSALKNSILLFSFLLI-IYLFFYYPSLHAPPRLLSSHVVTANPLTRRHLLFSIA 90
           PSR +T   L +S     +LLI I+L       H    L   +     P    H++F IA
Sbjct: 16  PSRFITILILSSSSFCIIYLLISIFLVGISKVAHVGSSLEDFNA----PTNLGHVVFGIA 71

Query: 91  SSSSSWPRRRSYVRLWYSPNSTRALTFL-DRAADSSSAGDPSLPRIVISADTSKFPFTFP 149
           S+  SWP+R+ YV+LW++P   R   FL D   D ++    SLP + IS DTS+F +TF 
Sbjct: 72  SNQKSWPKRKEYVKLWWNPQQMRGCVFLEDMPQDDANDTTSSLPPVCISEDTSRFRYTFR 131

Query: 150 KGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGS 209
            GLRSA+RVARVV E V L    + VRW+VFGDDDTVFF +NLVKTLSKYD   W+Y+GS
Sbjct: 132 NGLRSAIRVARVVSETVKLN--HSDVRWYVFGDDDTVFFTENLVKTLSKYDHGLWYYIGS 189

Query: 210 NSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVEL 269
           NSE  EQN   SF MAFGG GFAIS+ LA+VLA   DSC  RY HLYGSD+R+ SCL EL
Sbjct: 190 NSENLEQNRYFSFEMAFGGAGFAISYPLAKVLAKVFDSCTERYPHLYGSDSRISSCLAEL 249

Query: 270 GVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLSLHHLDAIDPIFPNMNRTQALQHLFKAV 329
           GVGLT EPGFHQ+D+RG+MFG+L++HPLSPL+SLHH D +DPIFPNM    +L+HLFKAV
Sbjct: 250 GVGLTREPGFHQVDLRGNMFGLLTSHPLSPLVSLHHFDDLDPIFPNMTTINSLEHLFKAV 309

Query: 330 NVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFTSW-RRGSNVE 388
            VD  R+LQ+TVCYD+    T+SVAWG+AV++Y  +  LPD L +Q TF  W ++GS + 
Sbjct: 310 TVDSQRVLQKTVCYDRWFSWTISVAWGYAVEIYGKHIFLPDTLPVQVTFQKWIKKGSLLA 369

Query: 389 SHFMFNLRDYPRDPCKRPIVFFLESVLSHNNSVQSNYVKHVVGNCARADVV-RKIEKIRV 447
             + FN+++   DPC+RP +FFL+ V S  + + ++Y K    NC+      RK+E+I+V
Sbjct: 370 GAYTFNVKEPHPDPCQRPTIFFLDHVSSSRDGITTHYKKSYT-NCSYDKASPRKLEEIKV 428

Query: 448 FSEKLELDVEEMKSPRRQCCDIF-PTYNESMNIKIRQCGGNELISMH 493
           FS KL+L  +++ SPRRQCCD+   + +++M I IR+C   ELI MH
Sbjct: 429 FSHKLDLSDKQLWSPRRQCCDVLRSSGSKTMEIGIRECKEEELIHMH 475

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	494
TAIR|locus:2129845	488	AT4G15240 [Arabidopsis thalian	0.975	0.987	0.463	1.6e-111
TAIR|locus:2207170	461	AT1G05280 "AT1G05280" [Arabido	0.773	0.828	0.371	7.4e-66
TAIR|locus:2026514	541	AT1G07850 [Arabidopsis thalian	0.811	0.741	0.350	2.7e-59
TAIR|locus:2040711	532	AT2G37730 [Arabidopsis thalian	0.793	0.736	0.347	2.2e-57
TAIR|locus:2177896	524	AT5G41460 [Arabidopsis thalian	0.819	0.772	0.324	2.8e-57
TAIR|locus:2128283	507	AT4G11350 [Arabidopsis thalian	0.815	0.794	0.334	5.9e-57
TAIR|locus:2025416	478	AT1G01570 [Arabidopsis thalian	0.815	0.843	0.315	3.7e-55
TAIR|locus:2117949	526	AT4G23490 [Arabidopsis thalian	0.811	0.762	0.315	7.8e-55
TAIR|locus:2080797	505	AT3G11420 [Arabidopsis thalian	0.821	0.803	0.310	5.5e-54
TAIR|locus:2196673	548	AT1G33250 [Arabidopsis thalian	0.807	0.728	0.312	2.7e-52

TAIR|locus:2129845 AT4G15240 [Arabidopsis thaliana (taxid:3702)]

 Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
 Identities = 228/492 (46%), Positives = 300/492 (60%)

Query:     6 NESRRRKRIISFLQNHSSFSPKIKMMPSRT--LTPSALKNXXXXXXXXXXXXXXXXXXXX 63
             N++RR++R  S L    S SP++ + P+++  LT S ++N                    
Sbjct:     2 NQTRRKRRPDSSLSRLDSLSPEM-LFPAKSPSLTSSRIRNIFLLLIFCFIIYIIFSYGTN 60

Query:    64 HAPPRLLS-SHVVTANPLTRRHLLFXXXXXXXXXXXXXXXXXLWYSPNSTRALTFLDRAA 122
                 ++ S +  ++     RRHLLF                 LWYSP STRA+ FLDR  
Sbjct:    61 FRREQISSIARSLSVFSTRRRHLLFSIAASHDSWLRRSSYVRLWYSPESTRAVVFLDRGG 120

Query:   123 DSSSAGDPSLPRIVISADTSKFPFTFPKGLXXXXXXXXXXXXXXDLTDEKAGVRWXXXXX 182
               S   D +LP +++S D S+FP+ FP GL              D  D+   VRW     
Sbjct:   121 LES---DLTLPPVIVSKDVSRFPYNFPGGLRSAIRVARVVKETVDRGDKD--VRWFVFGD 175

Query:   183 XXXXXXXXNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLA 242
                     NLV  LSKYD  +WFYVGSNSE Y+QN ++S           IS SLA+VLA
Sbjct:   176 DDTVFFVDNLVTVLSKYDHRKWFYVGSNSEFYDQNVRYSFDMAFGGGGFAISASLAKVLA 235

Query:   243 GALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMXXXXXXXXXXX 302
               LDSCLMRY+H+YGSD+R+FSC+ ELGV LT EPGFHQ+D+RG++FG+           
Sbjct:   236 KVLDSCLMRYSHMYGSDSRIFSCVAELGVTLTHEPGFHQIDVRGNIFGLLCAHPLSPLVS 295

Query:   303 XXXXDAIDPIFPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVY 362
                 DA+DP FP  NRT+++ HL  A + D  RILQQ+VCYD  + +TVSV WG+AVQVY
Sbjct:   296 LHHLDAVDPFFPKRNRTESVAHLIGAASFDSGRILQQSVCYDSLNTVTVSVVWGYAVQVY 355

Query:   363 EGNQLLPDLLSLQRTFTSWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHNNS-V 421
             EGN+LLPDLL+LQ+TF++WRRGS V+S++MF+ R+YPRDPC RP+VFFL+SV S      
Sbjct:   356 EGNKLLPDLLTLQKTFSTWRRGSGVQSNYMFSTREYPRDPCGRPLVFFLDSVGSDGTEGT 415

Query:   422 QSNYVKHVVGNCARADVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTYNESMNIKI 481
              SNY  H VG+C RA+ V ++E+IRV S KLE +VE+M  PRRQCCDI   YN+SM I I
Sbjct:   416 WSNYNIHRVGHCHRAEAVERLERIRVLSPKLERNVEQMGLPRRQCCDISSPYNKSMVINI 475

Query:   482 RQCGGNELISMH 493
             RQC  +ELI+M+
Sbjct:   476 RQCMPDELIAMN 487

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2207170 AT1G05280 "AT1G05280" [Arabidopsis thaliana (taxid:3702)]

 Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
 Identities = 146/393 (37%), Positives = 206/393 (52%)

Query:    78 NPLTRRHLLFXXXXXXXXXXXXXXXXXLWYSPNSTRALTFLDRAADSSSAGDPS--LPRI 135
             +P    H++F                 LW+     R   F++R   SS     S  LP +
Sbjct:    66 SPTKIEHIVFGIGSSAISWRARREYVKLWWDAQKMRGCVFVERPLPSSQNHTDSYLLPPV 125

Query:   136 VISADTSKFPFTFPKGLXXXXXXXXXXXXXXDLTDEKAG-VRWXXXXXXXXXXXXXNLVK 194
              +S DTS+F +T+  G                L +  +  VRW             NL +
Sbjct:   126 CVSQDTSRFRYTWRGGDRNAIRIARCVLETVRLFNTSSEEVRWYVFGDDDTIFIPENLAR 185

Query:   195 TLSKYDDDRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLAGALDSCLMRYAH 254
             TLSKYD   W+Y+GS SE Y QN+              +S SLA VLA   DSC+ RY H
Sbjct:   186 TLSKYDHTSWYYIGSTSEIYHQNSMFGHDMAFGGGGYALSSSLANVLARNFDSCIERYPH 245

Query:   255 LYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMXXXXXXXXXXXXXXXDAIDPIFP 314
             LYG D+RV++C++ELGVGL+ EPGFHQ D+RG+  G+                 IDPIFP
Sbjct:   246 LYGGDSRVYACVLELGVGLSKEPGFHQFDVRGNALGILTSHSTRPLVSLHHMAHIDPIFP 305

Query:   315 NMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQL-LPDLLS 373
             N     A++HLF AV +DP RI Q +VCYD+    T+SV+WG+ VQ+ +G  L L D+L 
Sbjct:   306 NSTTFSAVRHLFSAVQLDPLRIFQLSVCYDRWYSWTISVSWGYTVQI-DGRHLFLRDVLR 364

Query:   374 LQRTFTSWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLS--HNNSVQSNYVKHVVG 431
              Q TF  W++   + S + FN R+  RDPC+RP+ F+++ V S  H+ +++S Y K    
Sbjct:   365 AQETFRPWQKSGGLASVYTFNTREIHRDPCQRPVTFYMQHVSSSSHDGTIKSVY-KQAYE 423

Query:   432 NCARADVV--RKIEKIRVFSEKLELDVEEMKSP 462
             NC    V   RKI +IRVFS +L+ ++ + +SP
Sbjct:   424 NCTYDPVTSPRKIHEIRVFSRRLDPNIRQ-QSP 455

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2026514 AT1G07850 [Arabidopsis thaliana (taxid:3702)]

 Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
 Identities = 146/417 (35%), Positives = 202/417 (48%)

Query:    81 TRRHLLFXXXXXXXXXXXXXXXXXLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISAD 140
             T  H++F                  W+ P  TR + ++D+    +   DP LP I IS D
Sbjct:   124 TLDHIVFGIAASSVLWETRKEYIKSWWRPGKTRGVVWIDKRV-RTYRNDP-LPEIRISQD 181

Query:   141 TSKFPFTFPKGLXXXXXXXXXXXXXXDLTDEKAGVRWXXXXXXXXXXXXXNLVKTLSKYD 200
             TS+F +T P G                L   K GVRW             N+V  LSKYD
Sbjct:   182 TSRFRYTHPVGDRSAVRISRVVTETLRLG--KKGVRWFVMGDDDTVFVVDNVVNVLSKYD 239

Query:   201 DDRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLAGALDSCLMRYAHLYGSDA 260
               +++YVGS+SE + QN   S           IS++LA  L    D C+ RY  LYGSD 
Sbjct:   240 HTQFYYVGSSSEAHVQNIFFSYSMAFGGGGFAISYALALELLRMQDRCIQRYPGLYGSDD 299

Query:   261 RVFSCLVELGVGLTPEPGFHQLDMRGDMFGMXXXXXXXXXXXXXXXDAIDPIFPNMNRTQ 320
             R+ +C+ ELGV LT EPGFHQ D+ GD+ G+               D + PIFP M R++
Sbjct:   300 RIQACMTELGVPLTKEPGFHQYDVYGDLLGLLGAHPVAPLVSLHHIDVVQPIFPKMKRSR 359

Query:   321 ALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSL-QRTFT 379
             AL+HL  +  +DPA I QQ++CYDQ+   ++SV+WGF VQ+  G  + P  L +  RTF 
Sbjct:   360 ALRHLMSSAVLDPASIFQQSICYDQNRFWSISVSWGFVVQIIRGI-ISPRELEMPSRTFL 418

Query:   380 SWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVL--SHNNSVQSNY----VKHVVGNC 433
             +W R ++    + FN R   R PC+RP VF+L S         V   Y     + + G  
Sbjct:   419 NWFRKADYIG-YAFNTRPVSRHPCQRPFVFYLNSAKYDEGRRQVIGYYNLDKTRRIPGCR 477

Query:   434 ARADVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTY-NESMNIKIRQCGGNEL 489
              R D   KI+ + V      L     KSPRR CC + P+  N++M I +  C   E+
Sbjct:   478 WRLDSPGKIDSVVVLKRPDPLRWH--KSPRRDCCRVLPSRRNQTMYIWVGNCADGEI 532

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2040711 AT2G37730 [Arabidopsis thaliana (taxid:3702)]

 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 143/411 (34%), Positives = 202/411 (49%)

Query:    84 HLLFXXXXXXXXXXXXXXXXXLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSK 143
             H+ F                 LW+ PN TR   +LD     +     + P   +SADTS+
Sbjct:   100 HIAFGIGGSIQTWRDRSRYSELWWRPNVTRGFIWLDEEPPLNMTWLSTSPPYQVSADTSR 159

Query:   144 FPFTFPKGLXXXXXXXXXXXXXXDL--TDEKAGVRWXXXXXXXXXXXXXNLVKTLSKYDD 201
             F +T   G               +L  TD    VRW             NL+  L+KYD 
Sbjct:   160 FSYTCWYGSRSAIRMARIIKETFELGLTD----VRWFIMGDDDTVFFVDNLITVLNKYDH 215

Query:   202 DRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLAGALDSCLMRYAHLYGSDAR 261
             ++ +Y+G NSE  EQ+  HS           IS+ LA  L   LD C+ RYA LYGSD +
Sbjct:   216 NQMYYIGGNSESVEQDIVHSYAMAYGGGGIAISYPLAVELVKLLDGCIDRYASLYGSDQK 275

Query:   262 VFSCLVELGVGLTPEPGFHQLDMRGDMFGMXXXXXXXXXXXXXXXDAIDPIFPNMNRTQA 321
             + +CL E+GV LT E GFHQ+D+RG+ +G+               D +DPIFP   +  A
Sbjct:   276 IEACLSEIGVPLTKELGFHQVDIRGNPYGLLAAHPVAPLVTLHHLDYVDPIFPGTTQIDA 335

Query:   322 LQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFTSW 381
             L+ L  A   DP+RI+Q + C+DQ+    VSV+WG+ +Q+Y       +L +   TF SW
Sbjct:   336 LRRLVSAYKTDPSRIIQHSFCHDQTRNWYVSVSWGYTIQIYPTLVTAKELETPFLTFKSW 395

Query:   382 RRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLS-HNNSVQSNYVKHV-VGN---CARA 436
             R  S+    F F+ R    DPC+RP+V+FL+ V    +    + Y KHV VG    C   
Sbjct:   396 RTSSS--EPFSFDTRPISEDPCERPLVYFLDRVYEVGSGQTLTTYRKHVEVGESTQCNSP 453

Query:   437 DVVRK--IEKIRVFSEKLELDVEEMKSPRRQCCDIFPTYNES---MNIKIR 482
             D  R   +E I V +  L  D+ +M +PRRQCC+I  +  +S   +N+KIR
Sbjct:   454 DYSRANPVEFIDVSTTTLTPDLWKM-APRRQCCEIVNSEEDSESVINVKIR 503

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2177896 AT5G41460 [Arabidopsis thaliana (taxid:3702)]

 Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
 Identities = 135/416 (32%), Positives = 205/416 (49%)

Query:    83 RHLLFXXXXXXXXXXXXXXXXXLWYSPNSTRALTFLDRAADSSSAGDP-SLPRIVISADT 141
             +H++F                 +WY PN  R+  +L++        D  SLP + IS DT
Sbjct:   113 QHVVFGIAASARLWKQRKEYIKIWYKPNQMRSYVWLEKPVTEEDEEDEISLPPVKISGDT 172

Query:   142 SKFPFTFPKGLXXXXXXXXXXXXXXDLTDEKAGVRWXXXXXXXXXXXXXNLVKTLSKYDD 201
             SKFP+   +G                L  +   VRW             NL++ L KYD 
Sbjct:   173 SKFPYKNKQGHRSAIRISRIVTETLKLGLKD--VRWFVMGDDDTVFVAENLIRVLRKYDH 230

Query:   202 DRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLAGALDSCLMRYAHLYGSDAR 261
             ++ +Y+GS SE + QN   S           IS+ LA  L+   D C+ RY  LYGSD R
Sbjct:   231 NQMYYIGSLSESHLQNIYFSYGMAYGGGGFAISYPLAVALSKMQDRCIKRYPALYGSDDR 290

Query:   262 VFSCLVELGVGLTPEPGFHQLDMRGDMFGMXXXXXXXXXXXXXXXDAIDPIFPNMNRTQA 321
             + +C+ ELGV LT E GFHQ D+ G++FG+               D ++PIFPNM R  A
Sbjct:   291 MQACMAELGVPLTKELGFHQYDVYGNLFGLLAAHPVAPLVTLHHLDVVEPIFPNMTRVDA 350

Query:   322 LQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFTSW 381
             L+HL     +D A ++QQ++CYD+  + TVSV+WGFAVQ++ G     ++    RTF +W
Sbjct:   351 LKHLQVPAKLDSAGLMQQSICYDKRRKWTVSVSWGFAVQIFRGIFSAREIEMPSRTFLNW 410

Query:   382 RRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHN--NSVQSNYVKHVVGN--CA-RA 436
              R ++  + + FN R   R PC++P VF++ S   H   N   S Y  H V +  C  + 
Sbjct:   411 YRRADYTA-YAFNTRPVSRHPCQKPFVFYMTSTRVHRVTNMTVSRYEIHRVAHPECRWKM 469

Query:   437 DVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTYNESMNIKIRQCGGNELISM 492
                  I+ + V+ +K +  + + +SPRR CC +    N ++ I +  C   E++ +
Sbjct:   470 ANPSDIKTVIVY-KKPDPHLWD-RSPRRNCCRVKSKKNNTLEISVAVCKEGEVVEV 523

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2128283 AT4G11350 [Arabidopsis thaliana (taxid:3702)]

 Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
 Identities = 139/416 (33%), Positives = 204/416 (49%)

Query:    84 HLLFXXXXXXXXXXXXXXXXXLWYSPNSTRALTFLDRAAD-SSSAGDP-SLPRIVISADT 141
             H++F                 +WY P   R   +LD      S  GD  SLP + IS DT
Sbjct:    91 HVVFGIAASSKLWKQRKEYIKIWYKPKKMRGYVWLDEEVKIKSETGDQESLPSVRISGDT 150

Query:   142 SKFPFTFPKG-LXXXXXXXXXXXXXXDLTDE-KAGVRWXXXXXXXXXXXXXNLVKTLSKY 199
             S FP+T  +G                 L  E K  VRW             NL++ L KY
Sbjct:   151 SSFPYTNKQGHRSAIRISRIVSETLMSLDSESKKNVRWFVMGDDDTVFVTDNLIRVLRKY 210

Query:   200 DDDRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLAGALDSCLMRYAHLYGSD 259
             D ++ +Y+GS SE + QN   S           IS+ LA  L+   D C+ RY  LYGSD
Sbjct:   211 DHEQMYYIGSLSESHLQNIIFSYGMAYGGGGFAISYPLAVALSKMQDQCIQRYPALYGSD 270

Query:   260 ARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMXXXXXXXXXXXXXXXDAIDPIFPNMNRT 319
              R+ +C+ ELGV LT E GFHQ D+ G++FG+               D ++PIFPNM R 
Sbjct:   271 DRMQACMAELGVPLTKEIGFHQYDVHGNLFGLLAAHPITPFVSMHHLDVVEPIFPNMTRV 330

Query:   320 QALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFT 379
             +A++ L   + +D A +LQQ++CYD+    T+SV+WGFAVQV+ G+    ++    RTF 
Sbjct:   331 RAIKKLTTPMKIDSAALLQQSICYDKHKSWTISVSWGFAVQVFRGSFSPREMEMPSRTFL 390

Query:   380 SWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVL--SHNNSVQSNYVKHVVGNCA-RA 436
             +W + ++  + + FN R   R+ C++P VF + S       N+  S Y +H V   A R 
Sbjct:   391 NWYKRADYTA-YAFNTRPVSRNHCQKPFVFHMSSAKFDPQLNTTVSEYTRHRVPQPACRW 449

Query:   437 DVVR--KIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTY-NESMNIKIRQCGGNEL 489
             D+    +I  I V+ +K +  +   +SPRR CC +  T  N ++ I +  C   E+
Sbjct:   450 DMANPEEINTIVVY-KKPDPHLWN-RSPRRNCCRVLQTKRNNTLWINVGVCRAGEV 503

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2025416 AT1G01570 [Arabidopsis thaliana (taxid:3702)]

 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 132/419 (31%), Positives = 205/419 (48%)

Query:    83 RHLLFXXXXXXXXXXXXXXXXXLWYSPNST-RALTFLDRAADSSSAGDPSLPRIVISADT 141
             +H++F                 LW+ PN     + +LD+  + +     +LP I IS+DT
Sbjct:    56 KHVVFGIAASAKFWKHRKDYVKLWWKPNGEMNGVVWLDQHINQNDNVSKTLPPIRISSDT 115

Query:   142 SKFPFTFPKGLXXXXXXXXXXXXXXDL---TDEKAGVRWXXXXXXXXXXXXXNLVKTLSK 198
             S+F + +PKGL               L   T+ +  VRW             NLVK L K
Sbjct:   116 SRFQYRYPKGLRSAIRITRIVSETVRLLNGTELEKNVRWIVMGDDDTVFFPENLVKVLRK 175

Query:   199 YDDDRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLAGALDSCLMRYAHLYGS 258
             YD ++++Y+GS+SE + QN K S           IS+ LA+ L    D C+ RY+ LYGS
Sbjct:   176 YDHNQFYYIGSSSESHIQNLKFSYGMAYGGGGFAISYPLAKALEKMQDRCIQRYSELYGS 235

Query:   259 DARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMXXXXXXXXXXXXXXXDAIDPIFPNMNR 318
             D R+ +C+ ELGV LT E GFHQ+D+ G + G+               D +DP+FPNM R
Sbjct:   236 DDRIHACMSELGVPLTKEVGFHQIDLYGKLLGLLSAHPLAPLVSIHHLDLVDPVFPNMGR 295

Query:   319 TQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTF 378
               A++       +D   + QQ++CYD   + TVSV+WG+ VQ+  G     +++   RTF
Sbjct:   296 VNAMRRFMVPAKLDSPSLAQQSICYDADHRWTVSVSWGYTVQIIRGVLSAREMVIPTRTF 355

Query:   379 TSWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHN--NSVQSNYVKHV---VGNC 433
               W + ++ E  + FN R   +  C+RP V++L + L         S YV+        C
Sbjct:   356 IDWYKQAD-ERSYAFNTRPIAKSACQRPRVYYLSNALPDLALRRTASEYVRWYDMWEPEC 414

Query:   434 A--RADVVRKIEKIRVFSEKLELDV-EEMKSPRRQCCDIFPTY-NESMNIKIRQCGGNE 488
                 +D   + E++ V+ +K + D   + ++PRR CC + PT  N +M I +  C  +E
Sbjct:   415 DWDMSDP-SEFERVIVY-KKPDPDRWNKHRAPRRDCCRVLPTTKNGTMVIDVGACKDDE 471

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2117949 AT4G23490 [Arabidopsis thaliana (taxid:3702)]

 Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
 Identities = 131/415 (31%), Positives = 204/415 (49%)

Query:    84 HLLFXXXXXXXXXXXXXXXXXLWYSPNSTRALTFLDRAADSSSAGDPS---LPRIVISAD 140
             H++F                 +WY P   R   +LD+    S + D     LP + IS  
Sbjct:   113 HVVFGIAASSKLWKQRKEYIKIWYKPKRMRGYVWLDKEVKKSLSDDDDEKLLPPVKISGG 172

Query:   141 TSKFPFTFPKGLXXXXXXXXXXXXXXDLTDEKAGVRWXXXXXXXXXXXXXNLVKTLSKYD 200
             T+ FP+T  +G                L  +   VRW             NL++ L KYD
Sbjct:   173 TASFPYTNKQGQRSALRISRIVSETLRLGPKN--VRWFVMGDDDTVFVIDNLIRVLRKYD 230

Query:   201 DDRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLAGALDSCLMRYAHLYGSDA 260
              ++ +Y+GS SE + QN   S           IS+ LA+ L+   D C+ RY  LYGSD 
Sbjct:   231 HEQMYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALSKMQDRCIQRYPALYGSDD 290

Query:   261 RVFSCLVELGVGLTPEPGFHQLDMRGDMFGMXXXXXXXXXXXXXXXDAIDPIFPNMNRTQ 320
             R+ +C+ ELGV LT E GFHQ D+ G++FG+               D ++PIFPNM R +
Sbjct:   291 RMQACMAELGVPLTKELGFHQYDVYGNLFGLLAAHPVTPFVSMHHLDVVEPIFPNMTRVR 350

Query:   321 ALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFTS 380
             AL+ + + + +D A +LQQ++CYD+    T+SV+WG+AVQ++ G     ++    RTF +
Sbjct:   351 ALKKITEPMKLDSAGLLQQSICYDKHKSWTISVSWGYAVQIFRGIFSPREMEMPSRTFLN 410

Query:   381 WRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHN--NSVQSNYVKHVVGN--CA-R 435
             W + ++  + + FN R   R+PC++P VF++ S       N+  S Y  H V +  C  +
Sbjct:   411 WYKRADYTA-YAFNTRPVSRNPCQKPFVFYMSSTKFDQQLNTTVSEYTIHRVSHPSCRWK 469

Query:   436 ADVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTY-NESMNIKIRQCGGNEL 489
                  +I  I V+ +K +  + E +SPRR CC +  T  N ++ I +  C   E+
Sbjct:   470 MTNPAEINTIVVY-KKPDPHLWE-RSPRRNCCRVLQTKRNNTLWINVGVCRAGEV 522

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2080797 AT3G11420 [Arabidopsis thaliana (taxid:3702)]

 Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
 Identities = 133/428 (31%), Positives = 204/428 (47%)

Query:    76 TANPLTRRHLLFXXXXXXXXXXXXXXXXXLWYSPNSTRALTFLD---RAADSSSAGDPSL 132
             +  P    H+ F                 LW+  N+TR   +LD   +  ++ S    S+
Sbjct:    87 SVGPTNISHIFFSIAGAAETWIDRSQYISLWWR-NTTRGFVWLDEPVKIPENHSDVRFSI 145

Query:   133 PRIVISADTSKFPFTFPKGLXXXXXXXXXXXXXXDLTDEKAGVRWXXXXXXXXXXXXXNL 192
             P  V     ++F F+  +                +L +    VRW             NL
Sbjct:   146 PTRVSDPGWTRFKFSSSRA-AVRIARIIWDSYRLNLPN----VRWFVMGDDDTVFFTENL 200

Query:   193 VKTLSKYDDDRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLAGALDSCLMRY 252
             VK LSKYD ++ +Y+G NSE  EQ+  H+           +S  LA  LA A+D CL RY
Sbjct:   201 VKVLSKYDHEQMWYIGGNSESVEQDVMHAYDMAFGGGGFALSRPLAARLAAAMDDCLQRY 260

Query:   253 AHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMXXXXXXXXXXXXXXXDAIDPI 312
              + YGSD R+ SC+ E+GV  T E GFHQLD+RGD +G                  +DP+
Sbjct:   261 FYFYGSDQRIASCISEIGVPFTEERGFHQLDIRGDPYGFLAAHPLAPLVSLHHLVYLDPM 320

Query:   313 FPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLL 372
             FPN N  ++LQ L K   +DP RILQQ  C+D+  Q ++S++WG+ +Q+Y       +L 
Sbjct:   321 FPNKNPIESLQTLMKPYTLDPNRILQQINCHDRKRQWSISISWGYTIQIYTYFLTATELT 380

Query:   373 SLQRTFTSWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHNNSVQSNYVK---HV 429
             +  +TF +WR  S  +  F+FN R    DPC+RP+ +F++      +S    +       
Sbjct:   381 TPLQTFKTWRSSS--DGPFVFNTRPLKPDPCERPVTYFMDGAEDVRDSGTKTWYSIGDKN 438

Query:   430 VGNCARADVVR--KIEKIRVFSEKLELDVEEMKSPRRQCCDIFP-----TYNESMNIKIR 482
              G+C + +  R  K+++I V S K + +    K+PRRQCC++          + M ++IR
Sbjct:   439 YGHCGKIEHTRLTKVKRILVTSMKTDPEYWN-KAPRRQCCEVMEGKVGKRKEKEMLLRIR 497

Query:   483 QCGGNELI 490
             +C   E I
Sbjct:   498 KCRSLEKI 505

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2196673 AT1G33250 [Arabidopsis thaliana (taxid:3702)]

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 130/416 (31%), Positives = 207/416 (49%)

Query:    80 LTRRHLLFXXXXXXXXXXXXXXXXXLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISA 139
             L+  HL+F                 LW+ P+  R   +L+    S   GD SLP I++S 
Sbjct:   129 LSMNHLMFGIAGSSQLWERRKELVRLWWKPSQMRGHVWLEEQV-SPEEGDDSLPPIIVSE 187

Query:   140 DTSKFPFTFPKGLXXXXXXXXXXXXXXDLTDEKAGVRWXXXXXXXXXXXXXNLVKTLSKY 199
             D+S+F +T P G                L+     VRW             NL+  LSKY
Sbjct:   188 DSSRFRYTNPTGHPSGLRISRIAMESFRLS--LPNVRWFVLGDDDTIFNVHNLLAVLSKY 245

Query:   200 DDDRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLAGALDSCLMRYAHLYGSD 259
             D     Y+G+ SE +  N+  S           IS+ LA  L+   D CL RY  LYGSD
Sbjct:   246 DPSEMVYIGNPSESHSANSYFSHNMAFGGGGIAISYPLAEALSRIHDDCLDRYPKLYGSD 305

Query:   260 ARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMXXXXXXXXXXXXXXXDAIDPIFPNMNRT 319
              R+ +C+ ELGV L+ EPGFHQ D++G+  G+               +A++P++P ++  
Sbjct:   306 DRLHACITELGVPLSREPGFHQWDIKGNAHGLLSSHPIAPFVSIHHVEAVNPLYPGLSTL 365

Query:   320 QALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLP-DLLSLQRTF 378
              +L+ L +A+++DP  +LQ+++CYD + +LT +++ G+ VQV+  + LLP DL   + +F
Sbjct:   366 DSLKLLTRAMSLDPRSVLQRSICYDHTHKLTFAISLGYVVQVFP-SILLPRDLERAELSF 424

Query:   379 TSWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHNNSVQSNYVKHVVGN------ 432
             ++W  G +  S F  +++      CK+PI+FFL+ V    N+    Y + +V +      
Sbjct:   425 SAWN-GISQPSEFDLDIKLPISSLCKKPILFFLKEVGQEGNATLGTYSRSLVKDDLKTKL 483

Query:   433 -C-ARADVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTY-NESMNIKIRQCG 485
              C  R+  + K++KI+V    L  +     +PRR CC   PT  NE + + + QCG
Sbjct:   484 LCFPRSLPLHKVDKIQVSGFPLSKNWH--LAPRRLCCRATPTTTNEPLRLTVGQCG 537

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	494
pfam04646	256	pfam04646, DUF604, Protein of unknown function, DU	1e-119
PLN03153	537	PLN03153, PLN03153, hypothetical protein; Provisio	1e-114
pfam02434	248	pfam02434, Fringe, Fringe-like	2e-10

>gnl|CDD|218189 pfam04646, DUF604, Protein of unknown function, DUF604

 Score =  349 bits (897), Expect = e-119
 Identities = 132/259 (50%), Positives = 172/259 (66%), Gaps = 10/259 (3%)

Query: 216 QNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTP 275
           QN   S+GMAFGGGGFAIS+ LA  LA   D C+ RY  LYGSD R+ +C+ ELGV LT 
Sbjct: 1   QNIYFSYGMAFGGGGFAISYPLAAALARMQDGCIERYPALYGSDDRIHACMAELGVPLTK 60

Query: 276 EPGFHQLDMRGDMFGMLSAHPLSPLLSLHHLDAIDPIFPNMNRTQALQHLFKAVNVDPAR 335
           EPGFHQ D+RGD+ G+L+AHP++PL+SLHHLD +DPIFP MNR  AL+HL +A  +DPAR
Sbjct: 61  EPGFHQYDVRGDLLGLLAAHPVAPLVSLHHLDVVDPIFPGMNRLDALRHLMRAAKLDPAR 120

Query: 336 ILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFTSWRRGSNVESHFMFNL 395
           ILQQ++CYD+  + TVSV+WG+ VQ+Y G     +L    RTF +W R ++  + F FN 
Sbjct: 121 ILQQSICYDRRYKWTVSVSWGYTVQIYRGILSPRELERPLRTFLNWYRRAD-YTAFAFNT 179

Query: 396 RDYPRDPCKRPIVFFLESVLS--HNNSVQSNYVKHVV---GNCA--RADVVRKIEKIRVF 448
           R   RDPC+RP VFFL SV       + ++ Y +H V     C    AD +RKI++IRV 
Sbjct: 180 RPVTRDPCQRPRVFFLSSVREDRGRGTTKTEYTRHRVRRDPKCRWPIADPLRKIDQIRVS 239

Query: 449 SEKLELDVEEMKSPRRQCC 467
            +         ++PRR CC
Sbjct: 240 KKPDPD--LWHRAPRRNCC 256

This family includes a conserved region found in several uncharacterized plant proteins. Length = 256

>gnl|CDD|215605 PLN03153, PLN03153, hypothetical protein; Provisional

 Score =  348 bits (893), Expect = e-114
 Identities = 170/414 (41%), Positives = 247/414 (59%), Gaps = 14/414 (3%)

Query: 80  LTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISA 139
           L+  H++F IA SS  W RR+  VRLW+ PN  R   +L+    S   GD SLP I++S 
Sbjct: 119 LSLNHIMFGIAGSSQLWKRRKELVRLWWRPNQMRGHVWLEEQV-SPEEGDDSLPPIMVSE 177

Query: 140 DTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKY 199
           DTS+F +T P G  S +R++R+V E+  L      VRWFV GDDDT+F  DNLV  LSKY
Sbjct: 178 DTSRFRYTNPTGHPSGLRISRIVLESFRLG--LPDVRWFVLGDDDTIFNADNLVAVLSKY 235

Query: 200 DDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSD 259
           D     YVG  SE +  N+  S  MAFGGGG AIS+ LA  L+  LD CL RY  LYGSD
Sbjct: 236 DPSEMVYVGGPSESHSANSYFSHNMAFGGGGIAISYPLAEALSRILDDCLDRYPKLYGSD 295

Query: 260 ARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLSLHHLDAIDPIFPNMNRT 319
            R+ +C+ ELGV L+ EPGFHQ D+RG+  G+LS+HP++P +S+HH++A+DP +P ++  
Sbjct: 296 DRLHACITELGVPLSREPGFHQWDIRGNAHGLLSSHPIAPFVSIHHVEAVDPFYPGLSSL 355

Query: 320 QALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFT 379
            +L+   +A+ VDP   LQ+++CYD +  LT S++ G+ VQV+    L  DL   + T++
Sbjct: 356 DSLKLFTRAMKVDPRSFLQRSICYDHTHHLTFSISLGYVVQVFPSIVLPRDLERSELTYS 415

Query: 380 SWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLSHNNSVQSNYVKHVVGNCARADV- 438
           +W + S+  + F  + RD  +  CK+PI+FFL+ V    N+    Y +  + +  +  V 
Sbjct: 416 AWNKISH-RNEFDLDTRDPIKSVCKKPILFFLKDVGREGNATLGTYSRARMKDDLKRKVF 474

Query: 439 -------VRKIEKIRVFSEKLELDVEEMKSPRRQCCDIFPTYNESMNIKIRQCG 485
                  +  +EKI+V    L  +      PRR CC +  T +E + + + QC 
Sbjct: 475 CFPRSLPLPYVEKIQVLGFPLSKNWH--LVPRRLCCRLNQTSDELLTLTVGQCE 526

Length = 537

>gnl|CDD|190308 pfam02434, Fringe, Fringe-like

 Score = 61.2 bits (149), Expect = 2e-10
 Identities = 37/127 (29%), Positives = 48/127 (37%), Gaps = 26/127 (20%)

Query: 174 GVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS--------EGYEQNAKHSFGMA 225
           G +WF   DDD    V  LV+ LS Y+  +  Y+G  S        E  + N K  F  A
Sbjct: 84  GKKWFCHVDDDNYVNVPRLVRLLSCYNHTQDVYLGKPSLYRPIEATERVKNNRKVGFWFA 143

Query: 226 FGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARV-----------FSCLVELGVGLT 274
            GG GF IS  LA  ++               +  ++              L  LGV LT
Sbjct: 144 TGGAGFCISRGLALKMSPWASGG-----RFMSTSEKIRLPDDCTLGYIIENL--LGVPLT 196

Query: 275 PEPGFHQ 281
             P FH 
Sbjct: 197 HSPLFHS 203

The drosophila protein fringe (FNG) is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands. FNG is localised to the Golgi apparatus (not secreted as previously thought). Modification of Notch occurs through glycosylation by FNG. The xenopus homologue, lunatic fringe, has been implicated in a variety of functions. Length = 248

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	494
PLN03153	537	hypothetical protein; Provisional	100.0
PF04646	255	DUF604: Protein of unknown function, DUF604; Inter	100.0
KOG2246	364	consensus Galactosyltransferases [Carbohydrate tra	100.0
PF02434	252	Fringe: Fringe-like; InterPro: IPR003378 The Notch	99.97
KOG3708	681	consensus Uncharacterized conserved protein [Funct	99.38
KOG2287	349	consensus Galactosyltransferases [Carbohydrate tra	99.03
PLN03193	408	beta-1,3-galactosyltransferase; Provisional	98.87
PLN03133	636	beta-1,3-galactosyltransferase; Provisional	98.83
PF01762	195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	98.75
PTZ00210	382	UDP-GlcNAc-dependent glycosyltransferase; Provisio	98.41
KOG2288	274	consensus Galactosyltransferases [Carbohydrate tra	98.07
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	93.58
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	92.14
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	91.37
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	90.68
PRK11204	420	N-glycosyltransferase; Provisional	90.01
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	89.19
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	89.0
PF01755	200	Glyco_transf_25: Glycosyltransferase family 25 (LP	86.37
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	85.6
cd06532	128	Glyco_transf_25 Glycosyltransferase family 25 [lip	85.03
cd06436	191	GlcNAc-1-P_transferase N-acetyl-glucosamine transf	84.69
PF13506	175	Glyco_transf_21: Glycosyl transferase family 21	84.53
PRK14583	444	hmsR N-glycosyltransferase; Provisional	84.38
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	83.84
PF13632	193	Glyco_trans_2_3: Glycosyl transferase family group	82.5
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	82.36
cd06439	251	CESA_like_1 CESA_like_1 is a member of the cellulo	81.72
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	80.87

>PLN03153 hypothetical protein; Provisional

Probab=100.00  E-value=4.5e-109  Score=870.32  Aligned_cols=409  Identities=42%  Similarity=0.763  Sum_probs=384.3

Q ss_pred             CCCCCCeEEEEEecCCcchHhHHHHHHHhhCCCCceEEEEccCCCCCCCCCCCCCCcEEecCCCCCccccCCCCcchhhH
Q 011088           78 NPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVR  157 (494)
Q Consensus        78 ~~~~~s~IvFGIaTS~~~~~~R~~~vk~Ww~~~~~r~~vflD~~~~~~~~~~~~Lp~v~Is~d~sr~~yt~~~g~~sa~R  157 (494)
                      .+|+++||+|||+|+.+.|++|++|+|.||+++.+|++||+|+...+. ..+..+|++.|+.|++||+|+++.|+++++|
T Consensus       117 ~~t~~~hIvF~I~~s~~~w~~R~~yik~wW~p~~~rg~v~ld~~~~~~-~~~~~~P~i~is~d~s~f~y~~~~Gh~sa~r  195 (537)
T PLN03153        117 AELSLNHIMFGIAGSSQLWKRRKELVRLWWRPNQMRGHVWLEEQVSPE-EGDDSLPPIMVSEDTSRFRYTNPTGHPSGLR  195 (537)
T ss_pred             CCCccccEEEEEEEchhhhhhhhhhhhhhcCcccceeEEEecccCCCC-CCcCCCCCEEeCCCcccccccCCCCcHHHHH
Confidence            579999999999999999999999999999999999999999886542 3677899999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCccEEEEEcCCceeehhHHHHHhccCCCCCCEEEEecCCCCCCcccccccccccceeeEEcHHH
Q 011088          158 VARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSL  237 (494)
Q Consensus       158 i~riv~e~~~~~~~~p~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~~p~YIG~~se~~~q~~~fg~~~A~GGaG~vLSr~L  237 (494)
                      |+|++.|+++++.  |++|||||+||||||+++||+++|++||+++++|||+++|...++..|+|.||||||||+||++|
T Consensus       196 I~rmv~et~~~~~--pd~kWfVf~DDDTyf~~~NLv~~Ls~YDptkp~YIGs~Se~~~qn~~f~~~fA~GGAG~~LSrPL  273 (537)
T PLN03153        196 ISRIVLESFRLGL--PDVRWFVLGDDDTIFNADNLVAVLSKYDPSEMVYVGGPSESHSANSYFSHNMAFGGGGIAISYPL  273 (537)
T ss_pred             HHHHHHHHHHhhC--CCCCEEEEecCCccccHHHHHHHHhhcCCCCCEEecccccccccccccccccccCCceEEEcHHH
Confidence            9999999998876  99999999999999999999999999999999999999999999999998899999999999999


Q ss_pred             HHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccccCCCCCCCCCCCCCcCccccCCCCCccccCCCCCCCCCCCCCC
Q 011088          238 ARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLSLHHLDAIDPIFPNMN  317 (494)
Q Consensus       238 l~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt~~pgfhQ~d~~gd~~G~~~s~~~~P~lSlHH~~~~~~~fp~~~  317 (494)
                      |++|.+.+++|.++|+..++||.+|++||+++||+||+++||||+|+.||++|+|++||++|+||||||+.++|+||+|+
T Consensus       274 ae~L~~~~d~C~~rY~~~~~gD~rL~~CL~elGV~LT~~~gfhQ~D~~Gd~~G~les~p~~P~vSlHH~~~~~p~fP~~~  353 (537)
T PLN03153        274 AEALSRILDDCLDRYPKLYGSDDRLHACITELGVPLSREPGFHQWDIRGNAHGLLSSHPIAPFVSIHHVEAVDPFYPGLS  353 (537)
T ss_pred             HHHHHHHhhhhhhhcccCCCcHHHHHHHHHHcCCCceecCCccccccCCCcchHhhcCCCCCceeeeeccccccccCCcc
Confidence            99999999999999988899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhhhccCccceeeeeeeccCCceeEEEEeeeEEEEEEcCCCCChhhHHHHHHHhhccCCCCCccceeccCCC
Q 011088          318 RTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFTSWRRGSNVESHFMFNLRD  397 (494)
Q Consensus       318 ~~~al~~l~~~~~~~~~~~lqr~~~~d~~~~w~~~vs~GySi~~y~~~~~~~dl~~~~~Tf~~w~~~~~~~~~f~f~~r~  397 (494)
                      +.+|++++.+|+++|++++|||++|||..++|+|||||||||++|++++.++||+++|+||.+|++..+ ..+|+||||+
T Consensus       354 ~~~~~~~l~~a~~~d~~~~lq~siCyd~~~~w~fsvSwGysV~~y~~~~~~~dl~~~e~Tf~~w~~~~~-~~~f~fntr~  432 (537)
T PLN03153        354 SLDSLKLFTRAMKVDPRSFLQRSICYDHTHHLTFSISLGYVVQVFPSIVLPRDLERSELTYSAWNKISH-RNEFDLDTRD  432 (537)
T ss_pred             hHHHHHHHHHHhhcCchhHHHHHHhhhcccceeEEEeccEEEEEecCCCCchhhhhhHhhhhhhcccCC-CCCccccCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999988775 5789999999


Q ss_pred             CCCCCCCCCeEEEEceeeecCCcEEEEEeeCCc-------CCCCCcccc-CCccEEEEeccCCCcchhhhcCcccccccc
Q 011088          398 YPRDPCKRPIVFFLESVLSHNNSVQSNYVKHVV-------GNCARADVV-RKIEKIRVFSEKLELDVEEMKSPRRQCCDI  469 (494)
Q Consensus       398 ~~~~~c~r~~~~~l~~v~~~~~~v~~~Y~r~~~-------~~c~~~~~~-~~~~~i~V~~~~~~~~~~~~~~prr~cc~~  469 (494)
                      +++++|++|++|||++|..++++|+|+|+|+..       .+|.+.+++ ..|++|+|+++++ +..|. +||||+||+|
T Consensus       433 ~~r~~c~~p~~f~l~~~~~~~~~~~~~Y~r~~~~~~~~~~~~C~~~~~~~~~v~~i~V~~~~~-~~~w~-~aprr~CC~v  510 (537)
T PLN03153        433 PIKSVCKKPILFFLKDVGREGNATLGTYSRARMKDDLKRKVFCFPRSLPLPYVEKIQVLGFPL-SKNWH-LVPRRLCCRL  510 (537)
T ss_pred             CCCCcccCceEEEeeeccccCCeeEEEEEEecccccccccccccccCCChhhceEEEEecCCC-ccchh-hcchhhheec
Confidence            999999999999999997777789999998842       358888765 7899999998554 55565 5999999999


Q ss_pred             ccCCCCeEEEEEeeeCCCceeec
Q 011088          470 FPTYNESMNIKIRQCGGNELISM  492 (494)
Q Consensus       470 ~~~~~~~~~i~~~~c~~~e~~~~  492 (494)
                      .++++++|+|+||+|++||+++.
T Consensus       511 ~~~~~~~~~i~v~~C~~~e~~~~  533 (537)
T PLN03153        511 NQTSDELLTLTVGQCEKGSLGSF  533 (537)
T ss_pred             cCCCCCcEEEEEEeccCCccccc
Confidence            98889999999999999999863

>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins

Probab=100.00  E-value=1.8e-76  Score=577.09  Aligned_cols=249  Identities=57%  Similarity=1.004  Sum_probs=238.1

Q ss_pred             CcccccccccccceeeEEcHHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccccCCCCCCCCCCCCCcCccccC
Q 011088          216 QNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLSAH  295 (494)
Q Consensus       216 q~~~fg~~~A~GGaG~vLSr~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt~~pgfhQ~d~~gd~~G~~~s~  295 (494)
                      ||..|+|+||||||||+||+||+++|++++|.|+++|+..||||.+|++||+++||+||.++||||+|++||++|++++|
T Consensus         1 Qn~~fs~~MAfGGgG~~iS~pLa~~L~~~~d~C~~r~~~~~g~D~~i~~C~~~lgv~LT~e~g~hQ~Di~Gd~~G~~~a~   80 (255)
T PF04646_consen    1 QNVMFSYNMAFGGGGFAISYPLAKALAKMQDDCIERYPHLYGGDQRIQACIAELGVPLTKEPGFHQMDIRGDPSGFLEAH   80 (255)
T ss_pred             CCceeeccccccCceeEEcHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHhCCCceecCCceeEeeccCcceeeecC
Confidence            67889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCCCCCCCCCCCChHHHHHHHHhhhccCccceeeeeeeccCCceeEEEEeeeEEEEEEcCCCCChhhHHHH
Q 011088          296 PLSPLLSLHHLDAIDPIFPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQ  375 (494)
Q Consensus       296 ~~~P~lSlHH~~~~~~~fp~~~~~~al~~l~~~~~~~~~~~lqr~~~~d~~~~w~~~vs~GySi~~y~~~~~~~dl~~~~  375 (494)
                      +..|++|||||+.++||||+|++.+||+||++|+++|++++|||++|||++++|++|||||||||+|++.++++||+.++
T Consensus        81 ~~~pl~SlHH~~~~~PifP~~~~~~al~~L~~a~~~d~~~~lqqsicyd~~~~wsvsVSwGYsVqvy~~~l~~~dLe~~~  160 (255)
T PF04646_consen   81 PLAPLVSLHHWDSVDPIFPNMSRLQALRHLLKAAKVDPARILQQSICYDRRRNWSVSVSWGYSVQVYRGILTPRDLETPE  160 (255)
T ss_pred             CCCceeeeeehhhccccCCCCCHHHHHHHHHHHHhhChHhhhheeeeccCceEEEEEEEccEEEEEECCCCChHHHhhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCccceeccCCCCCCCCCCCCeEEEEceeee--cCCcEEEEEeeCCc--CCCCCccc-c-CCccEEEEec
Q 011088          376 RTFTSWRRGSNVESHFMFNLRDYPRDPCKRPIVFFLESVLS--HNNSVQSNYVKHVV--GNCARADV-V-RKIEKIRVFS  449 (494)
Q Consensus       376 ~Tf~~w~~~~~~~~~f~f~~r~~~~~~c~r~~~~~l~~v~~--~~~~v~~~Y~r~~~--~~c~~~~~-~-~~~~~i~V~~  449 (494)
                      +||.+|++.++ ..+|+|||||+++|+|+||++|||++|..  ++++++++|+|+..  ++|.+.+. + .+|++|+|++
T Consensus       161 rTF~~W~~~~~-~~~f~FnTRp~~~dpC~rP~vffL~~v~~~~~~~~t~s~Y~r~~~~~~~C~~~~~~p~~~v~~I~V~~  239 (255)
T PF04646_consen  161 RTFRTWYRRSD-RTPFAFNTRPVPRDPCQRPTVFFLSSVRSDSGSNQTVSSYVRHRVRNPNCCWPMADPLSKVQRIRVLK  239 (255)
T ss_pred             HHhhcccCcCc-CCceeccCCCCcCCCCCCCeEEEEeeeeecCCCCeEEEEEEecccCCCCCCCCCCCchhhceEEEEEc
Confidence            99999999886 68999999999999999999999999986  45679999999875  47999873 4 9999999999


Q ss_pred             cCCCcchhhhcCcccccc
Q 011088          450 EKLELDVEEMKSPRRQCC  467 (494)
Q Consensus       450 ~~~~~~~~~~~~prr~cc  467 (494)
                       +++|+.|+ +|||||||
T Consensus       240 -k~~~~~w~-~aPRR~CC  255 (255)
T PF04646_consen  240 -KPDPDLWK-KAPRRQCC  255 (255)
T ss_pred             -ccCCcccc-cCccccCC
Confidence             88899898 69999999

>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.1e-46  Score=390.73  Aligned_cols=291  Identities=36%  Similarity=0.535  Sum_probs=261.3

Q ss_pred             CCCCCCCeEEEE-EecCCcchHhHHHHHHHhhCCCCceEEEEccCCCCC-C--CCCCCCCCcEEecCCCCCcc---ccCC
Q 011088           77 ANPLTRRHLLFS-IASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADS-S--SAGDPSLPRIVISADTSKFP---FTFP  149 (494)
Q Consensus        77 ~~~~~~s~IvFG-IaTS~~~~~~R~~~vk~Ww~~~~~r~~vflD~~~~~-~--~~~~~~Lp~v~Is~d~sr~~---yt~~  149 (494)
                      ...+++.|++|| ++++...|..|..++.-||.++.++..++++...+. .  -.....+|++ ++.++++|+   |+.+
T Consensus        66 ~~~~~i~~~~~g~~~~s~~~~l~r~~~v~cwv~t~~~~~~~~~~~v~~TW~~rc~~~~f~s~~-~s~~~~~f~~v~~~~~  144 (364)
T KOG2246|consen   66 SLTTDILHLVFGIIASSIALWLSRSGRVLCWVLTSPMRHVTRADAVKETWLKRCDKGIFFSPT-LSKDDSRFPTVYYNLP  144 (364)
T ss_pred             ccccchhhhccCCccccchhccCCCceEEEEEEecCcCceeehhhhhcccccccCcceecCcc-CCCCCCcCceeeccCC
Confidence            367899999999 999999999999999999999999999999865332 1  1223446777 999999998   8899


Q ss_pred             CCcchhhHHHHHHHHHHH-hcCCCCCccEEEEEcCCceeehhHHHHHhccCCCCCCEEEEecCCCCCCcccccccccccc
Q 011088          150 KGLRSAVRVARVVKEAVD-LTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGG  228 (494)
Q Consensus       150 ~g~~sa~Ri~riv~e~~~-~~~~~p~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~~p~YIG~~se~~~q~~~fg~~~A~GG  228 (494)
                      .|.+++||+.|++.+.+. ...  .++|||+++||||||+++||+++|++|||++|+|||..+|.+.++. +++.||+||
T Consensus       145 ~g~~~~~~ktr~~~~yv~~~~~--~~~dWf~~aDDDTy~i~eNLr~~L~~yDp~~p~YiG~~~~~~~~~~-y~~g~ag~~  221 (364)
T KOG2246|consen  145 DGYRSLWRKTRIAFKYVYDHIL--KDYDWFLKADDDTYFIMENLRYVLSKYDPEKPVYLGYRSKSYFQNG-YSSGGAGYV  221 (364)
T ss_pred             cchHHHHHHHHHHHHHHHHhcc--CCCCeEEeccCCeEEeHHHHHHHHhhcCCCCcEEeccccccccccc-cccCCCCcc
Confidence            999999999999887764 554  8999999999999999999999999999999999999999998887 666777788


Q ss_pred             eeeEEcHHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccccCCCCCCCCCCCCCcCccccCCCCCccccCCCCC
Q 011088          229 GGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLSLHHLDA  308 (494)
Q Consensus       229 aG~vLSr~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt~~pgfhQ~d~~gd~~G~~~s~~~~P~lSlHH~~~  308 (494)
                      +|+++++++++++.+..+.|.+++.. +++|.+|++||+++||+++.+   ||.|.+|...|+..+|++.|.+++||+..
T Consensus       222 ls~aa~~~la~~l~~~~~~C~~~~~~-~~eD~~i~~Cl~~~GV~~~d~---~d~dg~~rf~~~~p~~~~~p~~s~~~~~~  297 (364)
T KOG2246|consen  222 LSFAALRRLAERLLNNEDKCPQRYPS-YGEDRRIGRCLAEVGVPATDE---RDEDGRGRFLPLLPAHPIAPLVSLHHLWL  297 (364)
T ss_pred             eeHHHHHHHHHHHhcchhhcccccCC-chhHHHHHHHHHHhCCCccCc---hhhhcccccCCCChhhccCCcccccccee
Confidence            88888888888888889999998876 789999999999999999998   99999999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHhhhccCccceeeeeeeccCCceeEEEEeeeEEEEEEcCCCCChhhHHHHHHHhhccC
Q 011088          309 IDPIFPNMNRTQALQHLFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFTSWRR  383 (494)
Q Consensus       309 ~~~~fp~~~~~~al~~l~~~~~~~~~~~lqr~~~~d~~~~w~~~vs~GySi~~y~~~~~~~dl~~~~~Tf~~w~~  383 (494)
                      +  +||+++...+..+++.+++.++. .+|+.+|||..+.|+++++|||.+++++....     .+++||.+|++
T Consensus       298 ~--~fp~~~~~~~~s~~~vsfh~~~~-~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~t~~~~~~  364 (364)
T KOG2246|consen  298 V--YFPNQNGSGCCSDLAVSFHYLSP-IEMQSFCYDIYRLRTFGVSWGYTVQIIRPNLS-----RPSRTFSSWND  364 (364)
T ss_pred             e--ecCCCchhhHHHHhhHhhccCCH-HHHHHHhhhhhheeeccccccccccccccccc-----ccccccCCCCC
Confidence            9  99999999999999999999988 99999999999999999999999999998776     78999999963

>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []

Probab=99.97  E-value=1.1e-31  Score=266.74  Aligned_cols=210  Identities=23%  Similarity=0.351  Sum_probs=117.9

Q ss_pred             CCCCCCeEEEEEecCCcchHhHHHHHHHhhCCCCceEEE-EccCCCCCCCCCCCCCCc-----EEecCCCCCccccCCCC
Q 011088           78 NPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALT-FLDRAADSSSAGDPSLPR-----IVISADTSKFPFTFPKG  151 (494)
Q Consensus        78 ~~~~~s~IvFGIaTS~~~~~~R~~~vk~Ww~~~~~r~~v-flD~~~~~~~~~~~~Lp~-----v~Is~d~sr~~yt~~~g  151 (494)
                      +++++++|+|+|+|+++++++|+.+++.+|.....+..+ |+|.++++       +|.     +.+. +++. .+.    
T Consensus         1 ~~~~~~dI~i~V~T~~k~h~tR~~~I~~TW~~~~~~~~~ifsd~~d~~-------l~~~~~~~l~~~-~~~~-~~~----   67 (252)
T PF02434_consen    1 EPVTLDDIFIAVKTTKKFHKTRAPAIKQTWAKRCNKQTFIFSDAEDPS-------LPTVTGVHLVNP-NCDA-GHC----   67 (252)
T ss_dssp             ----GGGEEEEEE--GGGTTTTHHHHHHTGGGGSGGGEEEEESS--HH-------HHHHHGGGEEE--------------
T ss_pred             CCcccccEEEEEEeCHHHHHHHHHHHHHHHHhhcCCceEEecCccccc-------cccccccccccC-CCcc-hhh----
Confidence            368999999999999999999999888888886665555 78866432       332     2222 2221 011    


Q ss_pred             cchhhHHHHHHHHHHHhcCCCCCccEEEEEcCCceeehhHHHHHhccCCCCCCEEEEecCCCCCCcc----------ccc
Q 011088          152 LRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNA----------KHS  221 (494)
Q Consensus       152 ~~sa~Ri~riv~e~~~~~~~~p~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~~p~YIG~~se~~~q~~----------~fg  221 (494)
                       +.+..+......-.. ..  +++|||+++|||||++++||+++|++||+++|+|||.++.......          .-+
T Consensus        68 -~~~~~~~~~~~y~~~-~~--~~~~Wf~~~DDDtyv~~~~L~~~L~~~~~~~~~yiG~~~~~~~~~~~~~~~~~~~~~~~  143 (252)
T PF02434_consen   68 -RKTLSCKMAYEYDHF-LN--SDKDWFCFADDDTYVNVENLRRLLSKYDPSEPIYIGRPSGDRPIEIIHRFNPNKSKDSG  143 (252)
T ss_dssp             ------HHHHHHHHHH-HH--HT-SEEEEEETTEEE-HHHHHHHHTTS-TTS--EEE-EE--------------------
T ss_pred             -HHHHHHHHHHHHHhh-hc--CCceEEEEEeCCceecHHHHHHHHhhCCCccCEEeeeeccCccceeeccccccccCcCc
Confidence             111222111111111 12  6899999999999999999999999999999999999985432111          124


Q ss_pred             ccccccceeeEEcHHHHHHHHHhhHHhh--hhccc-CCcchHHHHHHHHH-cCCccccCCCCCCCCCC--CCCcCccccC
Q 011088          222 FGMAFGGGGFAISHSLARVLAGALDSCL--MRYAH-LYGSDARVFSCLVE-LGVGLTPEPGFHQLDMR--GDMFGMLSAH  295 (494)
Q Consensus       222 ~~~A~GGaG~vLSr~Ll~~L~~~~d~C~--~~~~~-~~ggD~~L~~Ci~~-lGV~Lt~~pgfhQ~d~~--gd~~G~~~s~  295 (494)
                      +.||+|||||+|||+|+++|.+....|.  ..... ...+|+.||.||+. +||++|+.+.|||.-..  ......+.. 
T Consensus       144 ~~f~~GGaG~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~lG~ci~~~lgv~lt~s~~fhs~~~~l~~~~~~~l~~-  222 (252)
T PF02434_consen  144 FWFATGGAGYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTLGYCIENLLGVPLTHSPLFHSHLENLQDYNPETLHR-  222 (252)
T ss_dssp             --EE-GGG-EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHHHHHHHHTT---EEE-TT---SSS-GGG--TTTGGG-
T ss_pred             eEeeCCCeeHHHhHHHHHHHhhhcccccccCCcCCCCCcccChhhhhHHhcCCcceeechhhcccCcccccCCHHHhcc-
Confidence            4689999999999999999998776653  22211 24579999999999 99999999999996443  233334444 


Q ss_pred             CCCCccccCCCC
Q 011088          296 PLSPLLSLHHLD  307 (494)
Q Consensus       296 ~~~P~lSlHH~~  307 (494)
                        ++.||+|+..
T Consensus       223 --q~~~s~~~~~  232 (252)
T PF02434_consen  223 --QVPISYHKFE  232 (252)
T ss_dssp             ---SEEE-EEET
T ss_pred             --CCCeecCCCc
Confidence              4559999996

It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.

>KOG3708 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.38  E-value=7.8e-13  Score=139.66  Aligned_cols=164  Identities=20%  Similarity=0.284  Sum_probs=125.4

Q ss_pred             CCeEEEEEecCCcchHhHHHHHHHhhCCCCceEEEEccCCCCCCCCCCCCCCcEE-ecCCCCCccccCCCCcchhhHHHH
Q 011088           82 RRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIV-ISADTSKFPFTFPKGLRSAVRVAR  160 (494)
Q Consensus        82 ~s~IvFGIaTS~~~~~~R~~~vk~Ww~~~~~r~~vflD~~~~~~~~~~~~Lp~v~-Is~d~sr~~yt~~~g~~sa~Ri~r  160 (494)
                      ...++.||+|  +.  +-+-+++.+.....+|+.+|.+...-     +..+.... ++..          ..+.+++.+.
T Consensus        25 RErl~~aVmt--e~--tlA~a~NrT~ahhvprv~~F~~~~~i-----~~~~a~~~~vs~~----------d~r~~~~~s~   85 (681)
T KOG3708|consen   25 RERLMAAVMT--ES--TLALAINRTLAHHVPRVHLFADSSRI-----DNDLAQLTNVSPY----------DLRGQKTHSM   85 (681)
T ss_pred             HHHHHHHHHH--HH--HHHHHHHHHHHhhcceeEEeeccccc-----cccHhhccccCcc----------ccCccccHHH
Confidence            3568889999  21  44468999988889999999996531     11122222 2211          1245678888


Q ss_pred             HHHHHHHhcCCCCCccEEEEEcCCceeehhHHHHHhccCCCCCCEEEEecCCCCCCcccccccccccceeeEEcHHHHHH
Q 011088          161 VVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARV  240 (494)
Q Consensus       161 iv~e~~~~~~~~p~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~~p~YIG~~se~~~q~~~fg~~~A~GGaG~vLSr~Ll~~  240 (494)
                      .++.++++.+  .+++||+++-||||++...|++++.+.+.++++|+|...++-.     |  -|.||.|+.||++++.+
T Consensus        86 vl~~l~~~~~--~~YDwFll~~D~tYv~a~~L~~l~~hmsin~dlymGEe~~~gs-----~--rC~l~~G~LLS~s~l~~  156 (681)
T KOG3708|consen   86 VLGLLFNMVH--NNYDWFLLAKDSTYVNAFVLLRLIDHMSINEDLYMGEEAEDGS-----G--RCRLDTGMLLSQSLLHA  156 (681)
T ss_pred             HHHHHHHhhc--cccceEEEecCcceecHHHHHHHHhhcccccccccchhhhCcc-----C--ccccccceeecHHHHHH
Confidence            8888888877  8999999999999999999999999999999999996554221     2  38999999999999999


Q ss_pred             HHHhhHHhhhhcccCCcchHHHHHHHHH-cCCccc
Q 011088          241 LAGALDSCLMRYAHLYGSDARVFSCLVE-LGVGLT  274 (494)
Q Consensus       241 L~~~~d~C~~~~~~~~ggD~~L~~Ci~~-lGV~Lt  274 (494)
                      |.++++.|.... ..--.|..|++||.. +||.++
T Consensus       157 lrnnle~C~~~~-lsad~d~~lgrCi~~At~v~C~  190 (681)
T KOG3708|consen  157 LRNNLEGCRNDI-LSADPDEWLGRCIQDATGVGCK  190 (681)
T ss_pred             HHhhHHHhhccc-ccCCcHHHHHHHHHHhhcCCcc
Confidence            999999997532 112258899999987 888865

>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=99.03  E-value=4.3e-09  Score=109.84  Aligned_cols=207  Identities=22%  Similarity=0.309  Sum_probs=126.9

Q ss_pred             CCeEEEEEecCCcchHhHHHHHHHhhCCC-----CceEEEEccCCCCC------CCCCCCCCCcEEe-c-CCCCCccccC
Q 011088           82 RRHLLFSIASSSSSWPRRRSYVRLWYSPN-----STRALTFLDRAADS------SSAGDPSLPRIVI-S-ADTSKFPFTF  148 (494)
Q Consensus        82 ~s~IvFGIaTS~~~~~~R~~~vk~Ww~~~-----~~r~~vflD~~~~~------~~~~~~~Lp~v~I-s-~d~sr~~yt~  148 (494)
                      ..+|+.+|+|..+...+|...-++|...+     ..+.++++.....+      ..+....-..+.+ + .|+.. .   
T Consensus        94 ~~~lLl~V~S~~~~farR~aiR~TW~~~~~v~~~~v~~~FLvG~~~~~~~~~~~l~~Ea~~ygDIi~~df~Dty~-n---  169 (349)
T KOG2287|consen   94 PPELLLLVKSAPDNFARRNAIRKTWGNENNVRGGRVRVLFLVGLPSNEDKLNKLLADEARLYGDIIQVDFEDTYF-N---  169 (349)
T ss_pred             CceEEEEEecCCCCHHHHHHHHHHhcCccccCCCcEEEEEEecCCCcHHHHHHHHHHHHHHhCCEEEEecccchh-c---
Confidence            45799999999999988888778876654     24555555444321      0000111223332 2 23321 1   


Q ss_pred             CCCcchhhHHHHHHHHHHHhcCCCCCccEEEEEcCCceeehhHHHHHhccC-CCCCCEEEEecCCCCC----Ccccc---
Q 011088          149 PKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKY-DDDRWFYVGSNSEGYE----QNAKH---  220 (494)
Q Consensus       149 ~~g~~sa~Ri~riv~e~~~~~~~~p~~kWfv~~DDDTyf~~~nLv~~Ls~y-D~~~p~YIG~~se~~~----q~~~f---  220 (494)
                           -......++.....   ..|+++..+.+|||+||++++|++.|.+. ++++..|.|...+...    ....|   
T Consensus       170 -----ltlKtl~~l~w~~~---~cp~akfi~K~DDDvfv~~~~L~~~L~~~~~~~~~~~~G~v~~~~~p~R~~~~KwyVp  241 (349)
T KOG2287|consen  170 -----LTLKTLAILLWGVS---KCPDAKFILKIDDDVFVNPDNLLEYLDKLNDPSSDLYYGRVIQNAPPIRDKTSKWYVP  241 (349)
T ss_pred             -----hHHHHHHHHHHHHh---cCCcceEEEeccCceEEcHHHHHHHHhccCCCCcceEEEeecccCCCCCCCCCCCccC
Confidence                 11222222222211   24899999999999999999999999999 9999999998764310    01111   


Q ss_pred             -------cccccccceeeEEcHHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHc-CCccccCCCCCCCCCCCCCcCcc
Q 011088          221 -------SFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVEL-GVGLTPEPGFHQLDMRGDMFGML  292 (494)
Q Consensus       221 -------g~~~A~GGaG~vLSr~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~l-GV~Lt~~pgfhQ~d~~gd~~G~~  292 (494)
                             .|+-..+|+||+||+.+|++|...   +. ......-.|+.++.|+++. |+.....+++......      +
T Consensus       242 ~~~y~~~~YP~Y~sG~gYvis~~~a~~l~~~---s~-~~~~~~iEDV~~g~~l~~~~gi~~~~~~~~~~~~~~------~  311 (349)
T KOG2287|consen  242 ESEYPCSVYPPYASGPGYVISGDAARRLLKA---SK-HLKFFPIEDVFVGGCLAEDLGIKPVNHPGFFEIPLS------F  311 (349)
T ss_pred             HHHCCCCCCCCcCCCceeEecHHHHHHHHHH---hc-CCCccchHHHHHHHHHHHhcCCCcccCccccccccc------C
Confidence                   133334899999999999999873   22 1111223799999999985 8888777764332211      1


Q ss_pred             ccCCCCCccccCCCCCCC
Q 011088          293 SAHPLSPLLSLHHLDAID  310 (494)
Q Consensus       293 ~s~~~~P~lSlHH~~~~~  310 (494)
                      +.....-+++.|...+.+
T Consensus       312 ~~~~~~~~~~~H~~~p~e  329 (349)
T KOG2287|consen  312 DPCCYRDLLAVHRLSPNE  329 (349)
T ss_pred             CCCcccceEEEecCCHHH
Confidence            111123467788776443

>PLN03193 beta-1,3-galactosyltransferase; Provisional

Probab=98.87  E-value=3.7e-08  Score=103.79  Aligned_cols=106  Identities=22%  Similarity=0.208  Sum_probs=78.9

Q ss_pred             CCccEEEEEcCCceeehhHHHHHhccCCCCCCEEEEecCCCCC--C-------cccc--c-----ccccccceeeEEcHH
Q 011088          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYE--Q-------NAKH--S-----FGMAFGGGGFAISHS  236 (494)
Q Consensus       173 p~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~~p~YIG~~se~~~--q-------~~~f--g-----~~~A~GGaG~vLSr~  236 (494)
                      .++++|+.+|||+|+++++|+..|++......+|+|....+..  +       ...|  |     |.....|+||+||+.
T Consensus       235 ~dAkF~mK~DDDvfVnv~~L~~~L~~~~~~~rlYiG~m~~gPvr~~~~~ky~epe~w~~~~~~~~YPpyAsG~gYVlS~D  314 (408)
T PLN03193        235 WDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISKD  314 (408)
T ss_pred             CCCeEEEEcCCCceEcHHHHHHHHHhcCCCCCEEEEecccCccccCCCCcCcCcccccccCccccCCCCCCcceEEehHH
Confidence            6899999999999999999999998877666799999753210  0       0011  1     222247899999999


Q ss_pred             HHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccccCCCCCCC
Q 011088          237 LARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQL  282 (494)
Q Consensus       237 Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt~~pgfhQ~  282 (494)
                      +++.|...... ...|   --.|+.+|.||..++|.-.+.+.|+..
T Consensus       315 La~~I~~n~~~-L~~y---~~EDV~vG~Wl~~L~V~~vdd~~fcc~  356 (408)
T PLN03193        315 LASYISINQHV-LHKY---ANEDVSLGSWFIGLDVEHIDDRRLCCG  356 (408)
T ss_pred             HHHHHHhChhh-hccc---CcchhhhhhHhccCCceeeecccccCC
Confidence            99999855432 2222   246999999998888888888888754

>PLN03133 beta-1,3-galactosyltransferase; Provisional

Probab=98.83  E-value=7.4e-08  Score=106.81  Aligned_cols=177  Identities=14%  Similarity=0.200  Sum_probs=104.6

Q ss_pred             CeEEEEEecCCcchHhHHHHHHHhhCCC-----CceEEEEccCCCCC-C----CCCCCCCCcEEec--CCCCCccccCCC
Q 011088           83 RHLLFSIASSSSSWPRRRSYVRLWYSPN-----STRALTFLDRAADS-S----SAGDPSLPRIVIS--ADTSKFPFTFPK  150 (494)
Q Consensus        83 s~IvFGIaTS~~~~~~R~~~vk~Ww~~~-----~~r~~vflD~~~~~-~----~~~~~~Lp~v~Is--~d~sr~~yt~~~  150 (494)
                      -.++++|.|+.+.+++|...-++|....     ..+..+++....++ .    ..-......+.+-  .|.    |.+  
T Consensus       385 ~~LlI~V~Sap~nf~rR~AIR~TWg~~~~~~~~~v~~rFvVG~s~n~~l~~~L~~Ea~~ygDIIq~dF~Ds----Y~N--  458 (636)
T PLN03133        385 LDLFIGVFSTANNFKRRMAVRRTWMQYDAVRSGAVAVRFFVGLHKNQMVNEELWNEARTYGDIQLMPFVDY----YSL--  458 (636)
T ss_pred             eEEEEEEeCCcccHHHHHHHHHhhccccccCCCceEEEEEEecCCcHHHHHHHHHHHHHcCCeEEEeeech----hhh--
Confidence            3699999999999888877777765431     12333444322111 0    0001112233322  122    111  


Q ss_pred             CcchhhHHHHHHHHHHHhcCCCCCccEEEEEcCCceeehhHHHHHhccCCCCCCEEEEecCCCCCC----cccc------
Q 011088          151 GLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQ----NAKH------  220 (494)
Q Consensus       151 g~~sa~Ri~riv~e~~~~~~~~p~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~~p~YIG~~se~~~q----~~~f------  220 (494)
                         ..+....++...  .+  .+++++++.+|||+|+++++|++.|.+.+..+.+|+|........    ...|      
T Consensus       459 ---LTlKtl~~~~wa--~~--c~~akFilK~DDDvFVnv~~Ll~~L~~~~~~~~Ly~G~v~~~~~PiRd~~sKWYVs~~e  531 (636)
T PLN03133        459 ---ITWKTLAICIFG--TE--VVSAKYVMKTDDDAFVRVDEVLASLKRTNVSHGLLYGLINSDSQPHRNPDSKWYISPEE  531 (636)
T ss_pred             ---hHHHHHHHHHHH--Hh--CCCceEEEEcCCceEEcHHHHHHHHHhcCCCCceEEEEeccCCCcccCCCCCCCCCHHH
Confidence               122222222211  22  378999999999999999999999998888888999977532210    1111      


Q ss_pred             ----cccccccceeeEEcHHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHH---cCCccc
Q 011088          221 ----SFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVE---LGVGLT  274 (494)
Q Consensus       221 ----g~~~A~GGaG~vLSr~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~---lGV~Lt  274 (494)
                          .|+-..+|+||+||+.+++.|........  .+...-.|+.+|.|+++   .|++..
T Consensus       532 yp~~~YPpYasG~gYVlS~Dla~~L~~~s~s~~--l~~f~lEDVyvGi~l~~l~k~gl~v~  590 (636)
T PLN03133        532 WPEETYPPWAHGPGYVVSRDIAKEVYKRHKEGR--LKMFKLEDVAMGIWIAEMKKEGLEVK  590 (636)
T ss_pred             CCCCCCCCCCCcCEEEEcHHHHHHHHHhhhhcc--cCcCChhhHhHHHHHHHhcccCCCce
Confidence                13333489999999999999976543221  11123479999999975   355443

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=98.75  E-value=1.5e-07  Score=89.82  Aligned_cols=113  Identities=19%  Similarity=0.203  Sum_probs=80.2

Q ss_pred             HHHHHHHHHHHhcCCCCCccEEEEEcCCceeehhHHHHHhccC--CCCCCEEEEecCCCCC----Ccccc----------
Q 011088          157 RVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKY--DDDRWFYVGSNSEGYE----QNAKH----------  220 (494)
Q Consensus       157 Ri~riv~e~~~~~~~~p~~kWfv~~DDDTyf~~~nLv~~Ls~y--D~~~p~YIG~~se~~~----q~~~f----------  220 (494)
                      .....++.+.++   .+++++++++|||+|+++++|...|.+.  +..+..+.|.......    +...|          
T Consensus        66 K~~~~~~w~~~~---c~~~~~v~k~DDD~~vn~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~r~~~~kw~v~~~~y~~~  142 (195)
T PF01762_consen   66 KTLAGLKWASKH---CPNAKYVLKVDDDVFVNPDRLVSFLKSLKQDPSKNSIYGGCIKNGPPIRDPSSKWYVSEEEYPDD  142 (195)
T ss_pred             HHHHHHHHHHhh---CCchhheeecCcEEEEehHHhhhhhhhcccCccccccccccccCCccccccccCceeeeeecccc
Confidence            333444444433   2789999999999999999999999987  7777888787753321    11111          


Q ss_pred             cc-cccccceeeEEcHHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccccCC
Q 011088          221 SF-GMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP  277 (494)
Q Consensus       221 g~-~~A~GGaG~vLSr~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt~~p  277 (494)
                      -| .|| .|+|++||+.+++.|.....    ..+...-.|+.+|.|+.++||+.++.|
T Consensus       143 ~yP~y~-~G~~yvls~~~v~~i~~~~~----~~~~~~~eDv~iGi~~~~~~i~~~~~~  195 (195)
T PF01762_consen  143 YYPPYC-SGGGYVLSSDVVKRIYKASS----HTPFFPLEDVFIGILAEKLGIKPIHDP  195 (195)
T ss_pred             cCCCcC-CCCeEEecHHHHHHHHHHhh----cCCCCCchHHHHHHHHHHCCCCccCCC
Confidence            01 355 58899999999999987522    222344579999999999999887654

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane

>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional

Probab=98.41  E-value=2.6e-06  Score=88.96  Aligned_cols=133  Identities=17%  Similarity=0.190  Sum_probs=83.1

Q ss_pred             CCCccEEEEEcCCceeehhHHHHHhccCCCCCCEEEEecCCCCCCcccccccccccceeeEEcHHHHHHHHHhhHHh---
Q 011088          172 KAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSC---  248 (494)
Q Consensus       172 ~p~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~~p~YIG~~se~~~q~~~fg~~~A~GGaG~vLSr~Ll~~L~~~~d~C---  248 (494)
                      .|++++++.+|||+|+..++++..| +..+++.+|+|...........-.-.| .+|.|++||+.+++.|.......   
T Consensus       197 cP~a~YImKgDDDvFVrVp~lL~~L-r~~prr~LY~G~v~~~~~p~Rd~~PpY-~~G~gYvLSrDVA~~Lvs~~pl~rL~  274 (382)
T PTZ00210        197 FPNVSYIVKGDDDIFIRVPKYLADL-RVMPRHGLYMGRYNYYNRIWRRNQLTY-VNGYCITLSRDTAQAIISYKPLERLV  274 (382)
T ss_pred             CCCCCeEEEcCCCeEeeHHHHHHHH-hhCCCCceEEEeeCCCCccccCCCCCc-cccceeeccHHHHHHHHhhChHhHhh
Confidence            3899999999999999999999999 456777899998775432111101124 48899999999999998642211   


Q ss_pred             --------hhhccc--CCcchHHHHHHHHH-cC-Ccc-ccCCCCCCC-CCCCCCcCccccCCC-CCccccCCCCCCC
Q 011088          249 --------LMRYAH--LYGSDARVFSCLVE-LG-VGL-TPEPGFHQL-DMRGDMFGMLSAHPL-SPLLSLHHLDAID  310 (494)
Q Consensus       249 --------~~~~~~--~~ggD~~L~~Ci~~-lG-V~L-t~~pgfhQ~-d~~gd~~G~~~s~~~-~P~lSlHH~~~~~  310 (494)
                              .+.|..  ...+|.++|.-|.. +. -++ +..++.+-+ |.+.   |... +++ .-.|-+||++..+
T Consensus       275 ~~pys~~~~~~y~~~~~~~EDiMvG~vLr~~~k~~~l~~V~~~~c~Fhd~~~---~~~~-~~v~~~sVvvHhike~d  347 (382)
T PTZ00210        275 NMPFSMWDYFDFLDLGMFYEDVMVGMILREKVVYRNLISVEMGRCHFHNAGK---FGVR-KSVRNMSVVIHHIQEAD  347 (382)
T ss_pred             cCCCchHHHHHHHHhhcCchHHHHHHHHHHhcCcCceeeeccccccceecCC---CCCc-cccccceEEEEecCHHH
Confidence                    011211  23479999999964 33 233 344443322 3322   1111 111 2347889988654

>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=98.07  E-value=2.9e-05  Score=77.31  Aligned_cols=102  Identities=24%  Similarity=0.341  Sum_probs=72.4

Q ss_pred             CCccEEEEEcCCceeehhHHHHHhccCCCCCCEEEEecCCCC----------CCc-------ccccccccccceeeEEcH
Q 011088          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGY----------EQN-------AKHSFGMAFGGGGFAISH  235 (494)
Q Consensus       173 p~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~~p~YIG~~se~~----------~q~-------~~fg~~~A~GGaG~vLSr  235 (494)
                      -+.+.||.+|||+|+.++.|...|+++-....+|||-...+.          ++-       .+|  ..|+ |+|++||+
T Consensus       107 ~daeFyvKvDDDv~v~l~~L~~~la~~r~~pr~YiGcmksg~v~~~~~~kw~EpeWkfg~~g~Yf--rhA~-G~~YvlS~  183 (274)
T KOG2288|consen  107 WDAEFYVKVDDDVYVRLARLGTLLARERSHPRLYIGCMKSGPVLTQPGGKWYEPEWKFGDNGNYF--RHAT-GGGYVLSK  183 (274)
T ss_pred             ccceEEEEccccceecHHHHHHHHHhhccCCceEEEEecCCccccCCCCcccChhhhcCcccccc--hhcc-CceEEeeH
Confidence            579999999999999999999999999888889999864221          000       033  2354 68999999


Q ss_pred             HHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccccCCCCCC
Q 011088          236 SLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQ  281 (494)
Q Consensus       236 ~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt~~pgfhQ  281 (494)
                      .|+.-|.-+.+- +..|.   ..|+-||.-+.-+.|.-.+.|.++.
T Consensus       184 dLa~yi~in~~l-L~~y~---nEDVSlGaW~~gldV~h~dd~rlC~  225 (274)
T KOG2288|consen  184 DLATYISINRQL-LHKYA---NEDVSLGAWMIGLDVEHVDDPRLCC  225 (274)
T ss_pred             HHHHHHHHhHHH-HHhhc---cCCcccceeeeeeeeeEecCCcccc
Confidence            999988765433 33332   2588888877555555445555553

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=93.58  E-value=0.21  Score=44.08  Aligned_cols=85  Identities=20%  Similarity=0.188  Sum_probs=58.8

Q ss_pred             CCccEEEEEcCCceeehhHHHHHhccCCCCCC-EEEEecCCCCCCcccccccccccceeeEEcHHHHHHHHHhhHHhhhh
Q 011088          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRW-FYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMR  251 (494)
Q Consensus       173 p~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~~p-~YIG~~se~~~q~~~fg~~~A~GGaG~vLSr~Ll~~L~~~~d~C~~~  251 (494)
                      -+.+|++++|||.++.++.|.+++..+..... ..+|..               ..|+++++++.+++++... +...  
T Consensus        73 ~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~-~~~~--  134 (166)
T cd04186          73 AKGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK---------------VSGAFLLVRREVFEEVGGF-DEDF--  134 (166)
T ss_pred             CCCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc---------------CceeeEeeeHHHHHHcCCC-Chhh--
Confidence            36899999999999888888887775543332 233332               4789999999999886532 2211  


Q ss_pred             cccCCcchHHHHHHHHHcCCccccCC
Q 011088          252 YAHLYGSDARVFSCLVELGVGLTPEP  277 (494)
Q Consensus       252 ~~~~~ggD~~L~~Ci~~lGV~Lt~~p  277 (494)
                        ..++.|..+...+.+.|.++...|
T Consensus       135 --~~~~eD~~~~~~~~~~g~~i~~~~  158 (166)
T cd04186         135 --FLYYEDVDLCLRARLAGYRVLYVP  158 (166)
T ss_pred             --hccccHHHHHHHHHHcCCeEEEcc
Confidence              125568888888887787765544

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=92.14  E-value=0.42  Score=44.82  Aligned_cols=86  Identities=17%  Similarity=0.180  Sum_probs=58.9

Q ss_pred             CCccEEEEEcCCceeehhHHHHHhccC-CCCCCEEEEecCCCCCCcccccccccccceeeEEcHHHHHHHHHhhHHhhhh
Q 011088          173 AGVRWFVFGDDDTVFFVDNLVKTLSKY-DDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMR  251 (494)
Q Consensus       173 p~~kWfv~~DDDTyf~~~nLv~~Ls~y-D~~~p~YIG~~se~~~q~~~fg~~~A~GGaG~vLSr~Ll~~L~~~~d~C~~~  251 (494)
                      ...+|++++|+|+.+.++-|.+++..+ ++.-....|.               ...|+++++.+.+++++... +.    
T Consensus        85 a~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~---------------~~~g~~~~~r~~~~~~~ggf-~~----  144 (196)
T cd02520          85 ARYDILVISDSDISVPPDYLRRMVAPLMDPGVGLVTCL---------------CAFGKSMALRREVLDAIGGF-EA----  144 (196)
T ss_pred             CCCCEEEEECCCceEChhHHHHHHHHhhCCCCCeEEee---------------cccCceeeeEHHHHHhccCh-HH----
Confidence            468999999999998888887777765 3332222222               24678999999999987643 21    


Q ss_pred             cccCCcchHHHHHHHHHcCCccccCCC
Q 011088          252 YAHLYGSDARVFSCLVELGVGLTPEPG  278 (494)
Q Consensus       252 ~~~~~ggD~~L~~Ci~~lGV~Lt~~pg  278 (494)
                      .....+.|..+..-+.+.|......|.
T Consensus       145 ~~~~~~eD~~l~~rl~~~G~~i~~~~~  171 (196)
T cd02520         145 FADYLAEDYFLGKLIWRLGYRVVLSPY  171 (196)
T ss_pred             HhHHHHHHHHHHHHHHHcCCeEEEcch
Confidence            111235788888888888877655444

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=91.37  E-value=11  Score=39.91  Aligned_cols=96  Identities=15%  Similarity=0.137  Sum_probs=57.8

Q ss_pred             CCccEEEEEcCCceeehhHHHHHhccCCCCC-CEEEEecC---CCCCC--------------------ccccc-cccccc
Q 011088          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDR-WFYVGSNS---EGYEQ--------------------NAKHS-FGMAFG  227 (494)
Q Consensus       173 p~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~~-p~YIG~~s---e~~~q--------------------~~~fg-~~~A~G  227 (494)
                      ++.+|+++.|+|+.+.++.|.++++.+.... .+.-|.+.   ++...                    +...+ ...+ -
T Consensus       132 ~~gd~llflDaD~~~~p~~l~~lv~~~~~~~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  210 (384)
T TIGR03469       132 PPADYLLLTDADIAHGPDNLARLVARARAEGLDLVSLMVRLRCESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAA-A  210 (384)
T ss_pred             CCCCEEEEECCCCCCChhHHHHHHHHHHhCCCCEEEecccccCCCHHHHHHHHHHHHHHHHhcchhhhcCCCccceee-c
Confidence            4589999999999998888877777654322 22222221   11000                    00000 0012 3


Q ss_pred             ceeeEEcHHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccc
Q 011088          228 GGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLT  274 (494)
Q Consensus       228 GaG~vLSr~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt  274 (494)
                      |+++++++.+.+++-..-+..     ....+|..|+.-+.+.|.++.
T Consensus       211 G~~~lirr~~~~~vGGf~~~~-----~~~~ED~~L~~r~~~~G~~v~  252 (384)
T TIGR03469       211 GGCILIRREALERIGGIAAIR-----GALIDDCTLAAAVKRSGGRIW  252 (384)
T ss_pred             ceEEEEEHHHHHHcCCHHHHh-----hCcccHHHHHHHHHHcCCcEE
Confidence            678999999999976542211     124679999999998875544

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=90.68  E-value=0.88  Score=43.09  Aligned_cols=105  Identities=23%  Similarity=0.261  Sum_probs=57.1

Q ss_pred             HHHHHHHhcCCCCCccEEEEEcCCceeehhHHHHHhccC-CCCCCEEEEecCCCCC---------------------Ccc
Q 011088          161 VVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKY-DDDRWFYVGSNSEGYE---------------------QNA  218 (494)
Q Consensus       161 iv~e~~~~~~~~p~~kWfv~~DDDTyf~~~nLv~~Ls~y-D~~~p~YIG~~se~~~---------------------q~~  218 (494)
                      .+.+.++.    -..+|++++|||+.+.++-|.++++.+ +++-...-|...-...                     ...
T Consensus        77 a~n~~~~~----~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (228)
T PF13641_consen   77 ALNEALAA----ARGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDRNWLTRLQDLFFARWHLRFRSGRR  152 (228)
T ss_dssp             HHHHHHHH-------SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCCCEEEE-TT--S-EETTTS-TT-B
T ss_pred             HHHHHHHh----cCCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCCCHHHHHHHHHHhhhhhhhhhhhc
Confidence            44555544    248899999999999888888888877 4443333333210000                     001


Q ss_pred             cccccccccceeeEEcHHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccccCC
Q 011088          219 KHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP  277 (494)
Q Consensus       219 ~fg~~~A~GGaG~vLSr~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt~~p  277 (494)
                      ..+. ....|+|+++.+.+++++... +.      ...++|..+..-+...|.++...|
T Consensus       153 ~~~~-~~~~G~~~~~rr~~~~~~g~f-d~------~~~~eD~~l~~r~~~~G~~~~~~~  203 (228)
T PF13641_consen  153 ALGV-AFLSGSGMLFRRSALEEVGGF-DP------FILGEDFDLCLRLRAAGWRIVYAP  203 (228)
T ss_dssp             -----S-B--TEEEEEHHHHHHH-S---S------SSSSHHHHHHHHHHHTT--EEEEE
T ss_pred             ccce-eeccCcEEEEEHHHHHHhCCC-CC------CCcccHHHHHHHHHHCCCcEEEEC
Confidence            1121 223579999999999998642 22      235689989888888887765544

>PRK11204 N-glycosyltransferase; Provisional

Probab=90.01  E-value=4.7  Score=42.57  Aligned_cols=99  Identities=15%  Similarity=0.037  Sum_probs=62.5

Q ss_pred             CCccEEEEEcCCceeehhHHHHHhccC--CCCCCEEEEecCCCC-------CCc--------------ccccccccccce
Q 011088          173 AGVRWFVFGDDDTVFFVDNLVKTLSKY--DDDRWFYVGSNSEGY-------EQN--------------AKHSFGMAFGGG  229 (494)
Q Consensus       173 p~~kWfv~~DDDTyf~~~nLv~~Ls~y--D~~~p~YIG~~se~~-------~q~--------------~~fg~~~A~GGa  229 (494)
                      .+.+|++++|+|+...++-|.++++.+  |++-...-|.+.-..       .+.              ..+|..++.+|+
T Consensus       133 a~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~  212 (420)
T PRK11204        133 ARSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNPRIRNRSTLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGV  212 (420)
T ss_pred             cCCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEECCceeccchhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecce
Confidence            468999999999999888888888877  333222333221000       000              111222345688


Q ss_pred             eeEEcHHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccccCCC
Q 011088          230 GFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPG  278 (494)
Q Consensus       230 G~vLSr~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt~~pg  278 (494)
                      +.++.+.+++++... +.      ...++|..++.-+.+.|.++...|.
T Consensus       213 ~~~~rr~~l~~vgg~-~~------~~~~ED~~l~~rl~~~G~~i~~~p~  254 (420)
T PRK11204        213 ITAFRKSALHEVGYW-ST------DMITEDIDISWKLQLRGWDIRYEPR  254 (420)
T ss_pred             eeeeeHHHHHHhCCC-CC------CcccchHHHHHHHHHcCCeEEeccc
Confidence            889999998886432 11      1356799888888888877765553

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=89.19  E-value=11  Score=39.61  Aligned_cols=99  Identities=18%  Similarity=0.161  Sum_probs=62.1

Q ss_pred             CCccEEEEEcCCceeehhHHHHHhccCC-CCCCEEEEecCCCCCCc------------ccc----------c-ccccccc
Q 011088          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYD-DDRWFYVGSNSEGYEQN------------AKH----------S-FGMAFGG  228 (494)
Q Consensus       173 p~~kWfv~~DDDTyf~~~nLv~~Ls~yD-~~~p~YIG~~se~~~q~------------~~f----------g-~~~A~GG  228 (494)
                      ...+|+++.|+|+.+.++-|.++++.+. ++-.. ++.........            ..|          + ..++ .|
T Consensus       125 a~ge~i~~~DaD~~~~p~~L~~lv~~~~~~~v~~-V~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~G  202 (373)
T TIGR03472       125 ARHDILVIADSDISVGPDYLRQVVAPLADPDVGL-VTCLYRGRPVPGFWSRLGAMGINHNFLPSVMVARALGRARFC-FG  202 (373)
T ss_pred             ccCCEEEEECCCCCcChhHHHHHHHHhcCCCcce-EeccccCCCCCCHHHHHHHHHhhhhhhHHHHHHHhccCCccc-cC
Confidence            4689999999999999988888888774 33332 22222111000            000          1 0122 46


Q ss_pred             eeeEEcHHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccccCCC
Q 011088          229 GGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPG  278 (494)
Q Consensus       229 aG~vLSr~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt~~pg  278 (494)
                      +.+++.|.+++++... +.-    ....++|..|+.=+.+.|.++...+.
T Consensus       203 ~~~a~RR~~l~~iGGf-~~~----~~~~~ED~~l~~~i~~~G~~v~~~~~  247 (373)
T TIGR03472       203 ATMALRRATLEAIGGL-AAL----AHHLADDYWLGELVRALGLRVVLAPV  247 (373)
T ss_pred             hhhheeHHHHHHcCCh-HHh----cccchHHHHHHHHHHHcCCeEEecch
Confidence            7788999999887654 211    12245799999999988877765544

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=89.00  E-value=1.7  Score=41.22  Aligned_cols=99  Identities=16%  Similarity=0.022  Sum_probs=56.1

Q ss_pred             CCccEEEEEcCCceeehhHHHHHh---ccCCCCCCE-EEEecCCCC-C-------Cccc------------ccccccccc
Q 011088          173 AGVRWFVFGDDDTVFFVDNLVKTL---SKYDDDRWF-YVGSNSEGY-E-------QNAK------------HSFGMAFGG  228 (494)
Q Consensus       173 p~~kWfv~~DDDTyf~~~nLv~~L---s~yD~~~p~-YIG~~se~~-~-------q~~~------------fg~~~A~GG  228 (494)
                      .+.+|++++|||+.+.++-|.+++   ..+..+... .+|...... .       ....            ........|
T Consensus        74 ~~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
T cd02526          74 NGADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLIT  153 (237)
T ss_pred             CCCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccceeccCccceecccccCCceEeeeeec
Confidence            378999999999999887777774   333323222 222221100 0       0000            000012236


Q ss_pred             eeeEEcHHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccccC
Q 011088          229 GGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPE  276 (494)
Q Consensus       229 aG~vLSr~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt~~  276 (494)
                      +|+++++.+++++...-+..     ...+.|..+..-+.+.|..+...
T Consensus       154 ~~~~~rr~~~~~~ggfd~~~-----~~~~eD~d~~~r~~~~G~~~~~~  196 (237)
T cd02526         154 SGSLISLEALEKVGGFDEDL-----FIDYVDTEWCLRARSKGYKIYVV  196 (237)
T ss_pred             cceEEcHHHHHHhCCCCHHH-----cCccchHHHHHHHHHcCCcEEEE
Confidence            78899999998876432221     12346888888887778665443

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=86.37  E-value=2.8  Score=39.63  Aligned_cols=90  Identities=24%  Similarity=0.326  Sum_probs=51.4

Q ss_pred             CcchhhHHHHHHHHHHHhcCCCCCccEEEEEcCCceeehh---HHHHHhccCCCCCCEEEEec-----------------
Q 011088          151 GLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVD---NLVKTLSKYDDDRWFYVGSN-----------------  210 (494)
Q Consensus       151 g~~sa~Ri~riv~e~~~~~~~~p~~kWfv~~DDDTyf~~~---nLv~~Ls~yD~~~p~YIG~~-----------------  210 (494)
                      ..-|+..+..+.+++++     .+.++.++.|||.++..+   .|.+.++.-+...-++.|..                 
T Consensus        67 EiGC~lSH~~~w~~~v~-----~~~~~~lIlEDDv~~~~~f~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~  141 (200)
T PF01755_consen   67 EIGCALSHIKAWQRIVD-----SGLEYALILEDDVIFDPDFKEFLEEILSHIPDWDFLRLGGWKDNSYSPGDIFLSRLST  141 (200)
T ss_pred             eEeehhhHHHHHHHHHH-----cCCCeEEEEeccccccccHHHHHHHHHhhcccccchhhccccccccccccccceeeee
Confidence            33456666677777653     468999999999988732   33333333222222233111                 


Q ss_pred             --CCC--CCCc---------ccccccccccceeeEEcHHHHHHHHHhh
Q 011088          211 --SEG--YEQN---------AKHSFGMAFGGGGFAISHSLARVLAGAL  245 (494)
Q Consensus       211 --se~--~~q~---------~~fg~~~A~GGaG~vLSr~Ll~~L~~~~  245 (494)
                        ...  ....         ........+|.+||+||+..|++|....
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~aY~Is~~gA~kLL~~~  189 (200)
T PF01755_consen  142 FLSRSKRYKRKPIPPFGSRKLIRPAKYPYGTCAYLISRKGARKLLEAS  189 (200)
T ss_pred             hhhhhhhcccCcccccCCceEEeecCCCCcceeeeeCHHHHHHHHHhC
Confidence              000  0000         0001124568899999999999998753

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 25 GT25 from CAZY comprises enzymes with only one known activity; as a lipopolysaccharide biosynthesis protein. These enzymes catalyse the transfer of various sugars onto the growing lipopolysaccharide chain during its biosynthesis [].; GO: 0009103 lipopolysaccharide biosynthetic process

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=85.60  E-value=2.7  Score=39.04  Aligned_cols=89  Identities=24%  Similarity=0.315  Sum_probs=57.7

Q ss_pred             CCccEEEEEcCCceeehhHHHHHhccCC-CCCCEEEEecCCCCCCcccccccccccceeeEEcHHHHHHHHHhhHHhhhh
Q 011088          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYD-DDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMR  251 (494)
Q Consensus       173 p~~kWfv~~DDDTyf~~~nLv~~Ls~yD-~~~p~YIG~~se~~~q~~~fg~~~A~GGaG~vLSr~Ll~~L~~~~d~C~~~  251 (494)
                      .+.+|++++|||+.+..+.|.++++.+. +.-.++.|.....   .   +     .++|+++.+.+++++... +.   .
T Consensus        78 ~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~---~---~-----~~~~~~~~~~~~~~~g~~-~~---~  142 (202)
T cd04185          78 LGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVLDP---D---G-----SFVGVLISRRVVEKIGLP-DK---E  142 (202)
T ss_pred             cCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecceeEcC---C---C-----ceEEEEEeHHHHHHhCCC-Ch---h
Confidence            4789999999999998877777777665 3333433332211   0   1     457889999999877422 11   1


Q ss_pred             cccCCcchHHHHHHHHHcCCccccCCC
Q 011088          252 YAHLYGSDARVFSCLVELGVGLTPEPG  278 (494)
Q Consensus       252 ~~~~~ggD~~L~~Ci~~lGV~Lt~~pg  278 (494)
                      + ..++.|..+..=+.+.|..+ ..|.
T Consensus       143 ~-~~~~eD~~~~~r~~~~G~~i-~~~~  167 (202)
T cd04185         143 F-FIWGDDTEYTLRASKAGPGI-YVPD  167 (202)
T ss_pred             h-hccchHHHHHHHHHHcCCcE-Eecc
Confidence            2 23567888887777778666 4443

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis

Probab=85.03  E-value=2.6  Score=37.61  Aligned_cols=51  Identities=22%  Similarity=0.370  Sum_probs=39.6

Q ss_pred             hhhHHHHHHHHHHHhcCCCCCccEEEEEcCCceeehhHHHHHhccCCCCCCEEEEecCCCCCCcccccccccccceeeEE
Q 011088          154 SAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAI  233 (494)
Q Consensus       154 sa~Ri~riv~e~~~~~~~~p~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~~p~YIG~~se~~~q~~~fg~~~A~GGaG~vL  233 (494)
                      ++..+..+.+++.+     .+.+|.++.|||..+..+                                    |.+|++|
T Consensus        67 C~lSH~~~w~~~~~-----~~~~~alIlEDDv~~~~~------------------------------------~~~~Y~v  105 (128)
T cd06532          67 CFLSHYKLWQKIVE-----SNLEYALILEDDAILDPD------------------------------------GTAGYLV  105 (128)
T ss_pred             HHHHHHHHHHHHHH-----cCCCeEEEEccCcEECCC------------------------------------CceEEEe
Confidence            44555566666653     467899999999987765                                    7789999


Q ss_pred             cHHHHHHHHHhh
Q 011088          234 SHSLARVLAGAL  245 (494)
Q Consensus       234 Sr~Ll~~L~~~~  245 (494)
                      |+.++++|....
T Consensus       106 s~~~A~~ll~~~  117 (128)
T cd06532         106 SRKGAKKLLAAL  117 (128)
T ss_pred             CHHHHHHHHHhC
Confidence            999999998753

The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.

>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine

Probab=84.69  E-value=1.9  Score=40.34  Aligned_cols=67  Identities=19%  Similarity=0.104  Sum_probs=42.0

Q ss_pred             CccEEEEEcCCceeehhHHHHHhccCCCCCCEEEEecC----CCCC-----Cc--------------cccccccccccee
Q 011088          174 GVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS----EGYE-----QN--------------AKHSFGMAFGGGG  230 (494)
Q Consensus       174 ~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~~p~YIG~~s----e~~~-----q~--------------~~fg~~~A~GGaG  230 (494)
                      ..+|++++|.|+.+.++-|.+++..+...+--.++...    ....     +.              ..+| .+..||.|
T Consensus        89 ~~d~v~~~DaD~~~~~~~l~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~-~~~~~G~~  167 (191)
T cd06436          89 ERVIIAVIDADGRLDPNALEAVAPYFSDPRVAGTQSRVRMYNRHKNLLTILQDLEFFIIIAATQSLRALTG-TVGLGGNG  167 (191)
T ss_pred             CccEEEEECCCCCcCHhHHHHHHHhhcCCceEEEeeeEEEecCCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cEEECCee
Confidence            45799999999998888887766555322222222221    1100     00              1123 24579999


Q ss_pred             eEEcHHHHHHH
Q 011088          231 FAISHSLARVL  241 (494)
Q Consensus       231 ~vLSr~Ll~~L  241 (494)
                      .++++.+++++
T Consensus       168 ~~~r~~~l~~v  178 (191)
T cd06436         168 QFMRLSALDGL  178 (191)
T ss_pred             EEEeHHHHHHh
Confidence            99999999988

N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.

>PF13506 Glyco_transf_21: Glycosyl transferase family 21

Probab=84.53  E-value=4.4  Score=38.22  Aligned_cols=99  Identities=18%  Similarity=0.189  Sum_probs=64.7

Q ss_pred             CCccEEEEEcCCceeehhHHHHHhccCC-CCCC----EEEEecCCCCCCc-----cc--------c-cccccccceeeEE
Q 011088          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYD-DDRW----FYVGSNSEGYEQN-----AK--------H-SFGMAFGGGGFAI  233 (494)
Q Consensus       173 p~~kWfv~~DDDTyf~~~nLv~~Ls~yD-~~~p----~YIG~~se~~~q~-----~~--------f-g~~~A~GGaG~vL  233 (494)
                      ...+++++.|+|+.+.++-|.++++.+- |+-.    +|.+.+.++....     ..        + +..++ -|+.+++
T Consensus        30 a~~d~~~~~DsDi~v~p~~L~~lv~~l~~p~vglVt~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~-~G~~m~~  108 (175)
T PF13506_consen   30 AKYDYLVISDSDIRVPPDYLRELVAPLADPGVGLVTGLPRGVPARGFWSRLEAAFFNFLPGVLQALGGAPFA-WGGSMAF  108 (175)
T ss_pred             CCCCEEEEECCCeeECHHHHHHHHHHHhCCCCcEEEecccccCCcCHHHHHHHHHHhHHHHHHHHhcCCCce-ecceeee
Confidence            5799999999999999988888887663 4433    3444443322100     00        0 12233 4677899


Q ss_pred             cHHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccccCC
Q 011088          234 SHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP  277 (494)
Q Consensus       234 Sr~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt~~p  277 (494)
                      .+.+++++... +.    .....+.|..|++.+.+.|.++...+
T Consensus       109 rr~~L~~~GG~-~~----l~~~ladD~~l~~~~~~~G~~v~~~~  147 (175)
T PF13506_consen  109 RREALEEIGGF-EA----LADYLADDYALGRRLRARGYRVVLSP  147 (175)
T ss_pred             EHHHHHHcccH-HH----HhhhhhHHHHHHHHHHHCCCeEEEcc
Confidence            99999876422 11    11235679999999999998876665

>PRK14583 hmsR N-glycosyltransferase; Provisional

Probab=84.38  E-value=23  Score=38.09  Aligned_cols=99  Identities=12%  Similarity=-0.045  Sum_probs=63.6

Q ss_pred             CCccEEEEEcCCceeehhHHHHHhccC--CCCCCEEEEecCCCC-------CCc--------------ccccccccccce
Q 011088          173 AGVRWFVFGDDDTVFFVDNLVKTLSKY--DDDRWFYVGSNSEGY-------EQN--------------AKHSFGMAFGGG  229 (494)
Q Consensus       173 p~~kWfv~~DDDTyf~~~nLv~~Ls~y--D~~~p~YIG~~se~~-------~q~--------------~~fg~~~A~GGa  229 (494)
                      .+.++++++|+|+...++.|.++++.+  |++--..-|.+....       .+.              ..+|-.++.+|+
T Consensus       154 a~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~  233 (444)
T PRK14583        154 ARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPRIRTRSTLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGV  233 (444)
T ss_pred             CCCCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEEccceecCCCcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCc
Confidence            468999999999998888888887766  443333333321100       000              112223456788


Q ss_pred             eeEEcHHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccccCCC
Q 011088          230 GFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPG  278 (494)
Q Consensus       230 G~vLSr~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt~~pg  278 (494)
                      +.++.+.+++++...-+       ...++|..++.-+...|..+..+|.
T Consensus       234 ~~~~rr~al~~vGg~~~-------~~i~ED~dl~~rl~~~G~~i~~~p~  275 (444)
T PRK14583        234 VAAFRRRALADVGYWSP-------DMITEDIDISWKLQLKHWSVFFEPR  275 (444)
T ss_pred             eeEEEHHHHHHcCCCCC-------CcccccHHHHHHHHHcCCeEEEeec
Confidence            88999999888643211       1346799999999888877766654

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=83.84  E-value=4.1  Score=38.12  Aligned_cols=94  Identities=15%  Similarity=0.102  Sum_probs=55.5

Q ss_pred             CCccEEEEEcCCceeehhHHHHHhccCC-CCCCEEEEecCCCCCC--------------------cccccccccccceee
Q 011088          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYD-DDRWFYVGSNSEGYEQ--------------------NAKHSFGMAFGGGGF  231 (494)
Q Consensus       173 p~~kWfv~~DDDTyf~~~nLv~~Ls~yD-~~~p~YIG~~se~~~q--------------------~~~fg~~~A~GGaG~  231 (494)
                      ...+|++++|+|+.+.++-|.+++..+. +....+.|........                    ...++..+..-|+++
T Consensus        81 ~~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  160 (229)
T cd04192          81 AKGDWIVTTDADCVVPSNWLLTFVAFIQKEQIGLVAGPVIYFKGKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANM  160 (229)
T ss_pred             hcCCEEEEECCCcccCHHHHHHHHHHhhcCCCcEEeeeeeecCCccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceE
Confidence            4689999999999888877777777554 4444566654321100                    001122233457889


Q ss_pred             EEcHHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCC
Q 011088          232 AISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGV  271 (494)
Q Consensus       232 vLSr~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV  271 (494)
                      ++++.+++++-.. +.    .....++|..+..-+...|.
T Consensus       161 ~~rr~~~~~~ggf-~~----~~~~~~eD~~~~~~~~~~g~  195 (229)
T cd04192         161 AYRKEAFFEVGGF-EG----NDHIASGDDELLLAKVASKY  195 (229)
T ss_pred             EEEHHHHHHhcCC-cc----ccccccCCHHHHHHHHHhCC
Confidence            9999999987543 11    01123466666554444454

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2

Probab=82.50  E-value=2.1  Score=39.71  Aligned_cols=94  Identities=19%  Similarity=0.181  Sum_probs=57.6

Q ss_pred             EEEEEcCCceeehhHHHHHhccCCCCCCEEEE-ec-C----CCC---CCc--------------ccccccccccceeeEE
Q 011088          177 WFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVG-SN-S----EGY---EQN--------------AKHSFGMAFGGGGFAI  233 (494)
Q Consensus       177 Wfv~~DDDTyf~~~nLv~~Ls~yD~~~p~YIG-~~-s----e~~---~q~--------------~~fg~~~A~GGaG~vL  233 (494)
                      |++++|+||.+..+-|.+.+..++ +..+-++ .+ .    ++.   .+.              ..+|.....-|+|.++
T Consensus         1 ~v~~~DaDt~~~~d~l~~~~~~~~-~~~~~~vq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~   79 (193)
T PF13632_consen    1 YVLFLDADTRLPPDFLERLVAALE-DPKVDAVQGPIIFRNRGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGSGMLF   79 (193)
T ss_pred             CEEEEcCCCCCChHHHHHHHHHHh-CCCceEEEccEEecCCCChhheeehhhhhhhhhhhHHHHHhcCCCccccCcceee
Confidence            889999999999888888887776 2222111 11 1    110   000              0122223346999999


Q ss_pred             cHHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccccCC
Q 011088          234 SHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP  277 (494)
Q Consensus       234 Sr~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt~~p  277 (494)
                      ++.+++++...-+      ....++|..++.=+.+.|.++...|
T Consensus        80 r~~~l~~vg~~~~------~~~~~ED~~l~~~l~~~G~~~~~~~  117 (193)
T PF13632_consen   80 RREALREVGGFDD------PFSIGEDMDLGFRLRRAGYRIVYVP  117 (193)
T ss_pred             eHHHHHHhCcccc------cccccchHHHHHHHHHCCCEEEEec
Confidence            9999998763310      1235678888877777786665443

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=82.36  E-value=2.2  Score=40.23  Aligned_cols=94  Identities=17%  Similarity=0.074  Sum_probs=57.2

Q ss_pred             CCccEEEEEcCCceeehhHHHHHhccCCCCCC-EEEEecC-C-CCCC----c------------------cccccccccc
Q 011088          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRW-FYVGSNS-E-GYEQ----N------------------AKHSFGMAFG  227 (494)
Q Consensus       173 p~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~~p-~YIG~~s-e-~~~q----~------------------~~fg~~~A~G  227 (494)
                      .+.+|++++|+|+++.++-|.++++.+..+.. -.++... . ....    .                  ..++. ....
T Consensus        83 a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  161 (234)
T cd06421          83 TTGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDRWGA-AFCC  161 (234)
T ss_pred             CCCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhhcCC-ceec
Confidence            36899999999999998888888887754332 2333221 0 0000    0                  00111 2235


Q ss_pred             ceeeEEcHHHHHHHHHhhHHhhhhcccCCcchHHHHHHHHHcCCccc
Q 011088          228 GGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLT  274 (494)
Q Consensus       228 GaG~vLSr~Ll~~L~~~~d~C~~~~~~~~ggD~~L~~Ci~~lGV~Lt  274 (494)
                      |+|.++++.+++++... ++      ..++.|..+..=+...|..+.
T Consensus       162 g~~~~~r~~~~~~ig~~-~~------~~~~eD~~l~~r~~~~g~~i~  201 (234)
T cd06421         162 GSGAVVRREALDEIGGF-PT------DSVTEDLATSLRLHAKGWRSV  201 (234)
T ss_pred             CceeeEeHHHHHHhCCC-Cc------cceeccHHHHHHHHHcCceEE
Confidence            78999999999887542 21      135678888776666665543

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

Probab=81.72  E-value=5.4  Score=38.37  Aligned_cols=30  Identities=20%  Similarity=0.247  Sum_probs=24.4

Q ss_pred             CccEEEEEcCCceeehhHHHHHhccCCCCC
Q 011088          174 GVRWFVFGDDDTVFFVDNLVKTLSKYDDDR  203 (494)
Q Consensus       174 ~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~~  203 (494)
                      ..+|++++|+|+++..+-|.++++.+...+
T Consensus       109 ~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~  138 (251)
T cd06439         109 TGEIVVFTDANALLDPDALRLLVRHFADPS  138 (251)
T ss_pred             CCCEEEEEccccCcCHHHHHHHHHHhcCCC
Confidence            359999999999999877888888875333

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=80.87  E-value=3.9  Score=40.59  Aligned_cols=28  Identities=18%  Similarity=0.039  Sum_probs=22.3

Q ss_pred             CCccEEEEEcCCceeehhHHHHHhccCC
Q 011088          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYD  200 (494)
Q Consensus       173 p~~kWfv~~DDDTyf~~~nLv~~Ls~yD  200 (494)
                      .+.+|++++|||+.+..+.|.++++.++
T Consensus        72 ~~~d~i~~lD~D~~~~~~~l~~l~~~~~   99 (281)
T TIGR01556        72 RGVQGVLLLDQDSRPGNAFLAAQWKLLS   99 (281)
T ss_pred             CCCCEEEEECCCCCCCHHHHHHHHHHHH
Confidence            3689999999999998777666666554

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	494
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	6e-31
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280

 Score =  120 bits (301), Expect = 6e-31
 Identities = 53/275 (19%), Positives = 87/275 (31%), Gaps = 36/275 (13%)

Query: 79  PLTRRHLLFSIASSSSSWPRRRSYV-RLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVI 137
            L    +  ++ ++ +    R   +   W S    +   F D   +        L   ++
Sbjct: 9   ELQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQQTFIFTDSPDERLQ---ERLGPHLV 65

Query: 138 SADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLS 197
               S          + A      +           G+RWF   DDD       L++ L 
Sbjct: 66  VTQCSAEHSHPALSCKMAAEFDAFLVS---------GLRWFCHVDDDNYVNPKALLQLLK 116

Query: 198 KYDDDRWFYVGSNS----------EGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDS 247
            +  DR  YVG  S          +  ++     F  A GG GF I+  LA  +      
Sbjct: 117 TFPQDRDVYVGKPSLNRPIHASELQSKQRTKLVRFWFATGGAGFCINRQLALKMVPWASG 176

Query: 248 C--LMRYAHLYGSDARVFSCLVE--LGVGLTPEPGFHQLDMRGDMFGMLSAHPLSPLLSL 303
              +   A +   D      ++E  LG  L P P FH      +   +L A  L   ++L
Sbjct: 177 SHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHS---HLETLQLLGAAQLPEQVTL 233

Query: 304 HHLDAIDPIFPNMNRTQALQHLFKAVNVDPARILQ 338
            +      +F        L   F +   DP+R   
Sbjct: 234 SY-----GVFEGKLNVIKLPGPF-SHEEDPSRFRS 262

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 1e-05
 Identities = 73/524 (13%), Positives = 148/524 (28%), Gaps = 142/524 (27%)

Query: 4   PQNESRRRK--RIISFLQNHSSFSPKIKM--MP----SRTLTPSALKNSILL--FSFLLI 53
             N SR +   ++   L      +  + +  +     +  +      +  +     F  I
Sbjct: 128 KYNVSRLQPYLKLRQALLELRP-AKNVLIDGVLGSGKT-WVALDVCLSYKVQCKMDFK-I 184

Query: 54  IYLFF-YYPSLHAPPRLLSS--HVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPN 110
            +L      S      +L    + +  N  +R     +I     S        RL  S  
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR--RLLKSKP 242

Query: 111 STRALTFLDRAADSS--SAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVD- 167
               L  L    ++   +A + S   ++ +       F     L +A      +      
Sbjct: 243 YENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDF-----LSAATTTHISLDHHSMT 297

Query: 168 LT-DEKAGV--RWFVFGDDD-------TVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQN 217
           LT DE   +  ++      D       T     +++    +     W            N
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW-----------DN 346

Query: 218 AKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVF--------SCLVEL 269
            KH            I  SL       L+    R   ++   + VF          L  +
Sbjct: 347 WKHVNCDKLTT---IIESSLN-----VLEPAEYR--KMFDRLS-VFPPSAHIPTILLSLI 395

Query: 270 GVGLTPEPGFHQLDMRGDM-----FGMLSAHPLSPLLSLHHLDAIDPIFPNMNRTQALQH 324
              +         D+   +     + ++   P    +S+  +  ++      N      H
Sbjct: 396 WFDVIKS------DVMVVVNKLHKYSLVEKQPKESTISIPSIY-LELKVKLENEYAL--H 446

Query: 325 LFKAVNVDPARILQQTVCYDQSSQLTVSVAWGFAVQVYEGNQLLPDLLSLQRTFTSWRRG 384
                      I+     Y+               + ++ + L+P  L  Q  +      
Sbjct: 447 ---------RSIVDH---YN-------------IPKTFDSDDLIPPYLD-QYFY------ 474

Query: 385 SNVESHFMFNLR--DYPRDPCKRPIVF----FLESVLSH-----------NNSVQ--SNY 425
               SH   +L+  ++P       +VF    FLE  + H            N++Q    Y
Sbjct: 475 ----SHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFY 530

Query: 426 VKHVVGNCARADVVRKIEKIRVFSEKLELDVEEMKSPRRQCCDI 469
             ++  N  + +  R +  I  F  K+E ++  + S      D+
Sbjct: 531 KPYICDNDPKYE--RLVNAILDFLPKIEENL--ICSK---YTDL 567

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	494
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	99.97

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*

Probab=99.97  E-value=5.4e-31  Score=263.78  Aligned_cols=214  Identities=21%  Similarity=0.241  Sum_probs=144.0

Q ss_pred             CCCCCCeEEEEEecCCcchHhHHHHHHHhhCCCC-ceEEEEccCCCCCCCCCCCCCCcEEecCCCCCccccCCCCcchhh
Q 011088           78 NPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNS-TRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAV  156 (494)
Q Consensus        78 ~~~~~s~IvFGIaTS~~~~~~R~~~vk~Ww~~~~-~r~~vflD~~~~~~~~~~~~Lp~v~Is~d~sr~~yt~~~g~~sa~  156 (494)
                      +++++++|+|||+|+.++|++|+++++.||++.. .++++|+|.++++....  .+..+ +..+.+. .|.. .++  ..
T Consensus         8 ~~~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~~~fifsd~~d~~l~~~--~~~~~-~~~~~~~-~~~~-~~l--~~   80 (280)
T 2j0a_A            8 LELQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQQTFIFTDSPDERLQER--LGPHL-VVTQCSA-EHSH-PAL--SC   80 (280)
T ss_dssp             -CCCGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGGGEEEEESSCCHHHHHH--HGGGE-EECCC---------CC--CH
T ss_pred             CCCCcccEEEEEECcHHHHHHHHHHHHHHHhccCCCceEEEcCCCccccccc--ccccc-eeccccc-cccc-cch--HH
Confidence            5789999999999999999999999998888743 46778988764321100  01112 2222211 1111 011  12


Q ss_pred             HHHHHHHHHHHhcCCCCCccEEEEEcCCceeehhHHHHHhccCCCCCCEEEEecCCCCCCc----------ccccccccc
Q 011088          157 RVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQN----------AKHSFGMAF  226 (494)
Q Consensus       157 Ri~riv~e~~~~~~~~p~~kWfv~~DDDTyf~~~nLv~~Ls~yD~~~p~YIG~~se~~~q~----------~~fg~~~A~  226 (494)
                      ++...+...   ..  +++|||+++||||||+++||+++|++||+++++|||.+++.....          ..+++.||+
T Consensus        81 K~~~~~~~~---l~--~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~~~~~~~~~~~~~~~~~y~~  155 (280)
T 2j0a_A           81 KMAAEFDAF---LV--SGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIHASELQSKQRTKLVRFWFAT  155 (280)
T ss_dssp             HHHHHHHHH---HH--HTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-------------------CCEEC
T ss_pred             HHHHHHHHH---hC--CCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccccccccCccccccccccCccc
Confidence            333333322   12  689999999999999999999999999999999999998664210          112456899


Q ss_pred             cceeeEEcHHHHHHHHHhhHHhhh--hc-ccCCcchHHHHHHHH-HcCCccccCCCCCCCCCC-CCCc-CccccCCCCCc
Q 011088          227 GGGGFAISHSLARVLAGALDSCLM--RY-AHLYGSDARVFSCLV-ELGVGLTPEPGFHQLDMR-GDMF-GMLSAHPLSPL  300 (494)
Q Consensus       227 GGaG~vLSr~Ll~~L~~~~d~C~~--~~-~~~~ggD~~L~~Ci~-~lGV~Lt~~pgfhQ~d~~-gd~~-G~~~s~~~~P~  300 (494)
                      |||||+||++|+++|.+..+.|.-  .. .....+|..||.||+ ++||+++++++|||.... ++.. ..+..   ++.
T Consensus       156 GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~~~~~~~~~~l~~---~~~  232 (280)
T 2j0a_A          156 GGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLETLQLLGAAQLPE---QVT  232 (280)
T ss_dssp             GGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSSCGGGCCTTTGGG---CSE
T ss_pred             CCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCCchhccCCHHHhcc---Ccc
Confidence            999999999999999988766621  00 012346999999999 799999999999998753 2222 22222   456


Q ss_pred             cccCCC
Q 011088          301 LSLHHL  306 (494)
Q Consensus       301 lSlHH~  306 (494)
                      +|+|++
T Consensus       233 ~s~~~~  238 (280)
T 2j0a_A          233 LSYGVF  238 (280)
T ss_dssp             EECEEE
T ss_pred             eecccc
Confidence            899954

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	494
d1qg8a_	255	Spore coat polysaccharide biosynthesis protein Sps	84.09

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

Probab=84.09  E-value=1.4  Score=38.68  Aligned_cols=95  Identities=15%  Similarity=0.164  Sum_probs=54.8

Q ss_pred             CCccEEEEEcCCceeehhHHHHHhccC--CCCCCEEEEecC-----CCC---------CCcccccccccccceeeEEcHH
Q 011088          173 AGVRWFVFGDDDTVFFVDNLVKTLSKY--DDDRWFYVGSNS-----EGY---------EQNAKHSFGMAFGGGGFAISHS  236 (494)
Q Consensus       173 p~~kWfv~~DDDTyf~~~nLv~~Ls~y--D~~~p~YIG~~s-----e~~---------~q~~~fg~~~A~GGaG~vLSr~  236 (494)
                      -+.+|++++|+|.++.++.|.++++.+  +++..++.|...     +..         .....+...+..+++++++++.
T Consensus        87 a~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (255)
T d1qg8a_          87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAAQVTWNAPCAIDHCSVMHRYS  166 (255)
T ss_dssp             CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECCCSCBSCCTTTSCGGGEEEETH
T ss_pred             cccccccccccccccccchHHHHHHHHHhCCCCCeEeecceeeeeCCCCcEeeeecccchhhhhhhcccccchhHHHHHH
Confidence            357999999999988866555544433  344444444321     111         0111223345678899999999


Q ss_pred             HHHHHHHhhHHhhhhccc-CCcchHHHHHHHH
Q 011088          237 LARVLAGALDSCLMRYAH-LYGSDARVFSCLV  267 (494)
Q Consensus       237 Ll~~L~~~~d~C~~~~~~-~~ggD~~L~~Ci~  267 (494)
                      +++++........+.... ...+|..+...+.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~D~dl~lrl~  198 (255)
T d1qg8a_         167 VLEKVKEKFGSYWDESPAFYRIGDARFFWRVN  198 (255)
T ss_dssp             HHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHT
T ss_pred             HHHHHHHhhCCCccccchhcchhhHHHHHHHH
Confidence            999987654433322211 2346777655543