BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011091
(494 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94KI8|TPC1_ARATH Two pore calcium channel protein 1 OS=Arabidopsis thaliana GN=TPC1
PE=1 SV=1
Length = 733
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/439 (71%), Positives = 368/439 (83%), Gaps = 2/439 (0%)
Query: 33 RRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLNYF 92
RR++AIT G+P+QKAAALVDLAEDGIGLP EILD+SSF SA++YFIF + D IWSLNYF
Sbjct: 20 RRSEAITHGTPFQKAAALVDLAEDGIGLPVEILDQSSFGESARYYFIFTRLDLIWSLNYF 79
Query: 93 ALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFF 152
AL+ LNF E+PLWC K SC DR+YYYLG+LPYLT ES++YE ITL IL++HTFF
Sbjct: 80 ALLFLNFFEQPLWCEKNP--KPSCKDRDYYYLGELPYLTNAESIIYEVITLAILLVHTFF 137
Query: 153 PITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFIL 212
PI+YEGS IFW S +KV C++IL D LV LYLSP+AF+FLP RIAPY+RV+ FIL
Sbjct: 138 PISYEGSRIFWTSRLNLVKVACVVILFVDVLVDFLYLSPLAFDFLPFRIAPYVRVIIFIL 197
Query: 213 NIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQ 272
+IR+LRDTL +L+GMLGTYLN+LAL +LFLLF+SW+A+V+FEDT QG VFTS+G TLYQ
Sbjct: 198 SIRELRDTLVLLSGMLGTYLNILALWMLFLLFASWIAFVMFEDTQQGLTVFTSYGATLYQ 257
Query: 273 MFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVS 332
MF+LFTTSNNPDVWIPAYK+SRW +FFVLYVLIGVYFVTNLILAVVYDSFK QLAKQVS
Sbjct: 258 MFILFTTSNNPDVWIPAYKSSRWSSVFFVLYVLIGVYFVTNLILAVVYDSFKEQLAKQVS 317
Query: 333 EMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDD 392
MD+M+RR L KAF LID+ G ++K QCIKLFE+L YRTLP IS+EEF LIFDELDD
Sbjct: 318 GMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEQLTNYRTLPKISKEEFGLIFDELDD 377
Query: 393 THDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMIS 452
T DFKIN DEFADLC AIALRFQKE+VPS FE+ P IYHS S++L+AF+RS FGY IS
Sbjct: 378 TRDFKINKDEFADLCQAIALRFQKEEVPSLFEHFPQIYHSALSQQLRAFVRSPNFGYAIS 437
Query: 453 IILIVNLVAVIVETTVWLE 471
ILI+N +AV+VETT+ +E
Sbjct: 438 FILIINFIAVVVETTLDIE 456
Score = 37.0 bits (84), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 15/87 (17%)
Query: 269 TLYQMFVLFTTSNNPDVWIPAYK---ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKS 325
TL+ + V+ N VW+ +YK + W +FV + +I + + NL++A V ++F +
Sbjct: 622 TLFNLLVM----GNWQVWMESYKDLTGTWWSITYFVSFYVITILLLLNLVVAFVLEAFFT 677
Query: 326 QL--------AKQVSEMDRMRRRTLGK 344
+L Q S+ R RRR+ G
Sbjct: 678 ELDLEEEEKCQGQDSQEKRNRRRSAGS 704
>sp|Q75VR1|TPC1A_TOBAC Two pore calcium channel protein 1A OS=Nicotiana tabacum GN=TPC1A
PE=2 SV=1
Length = 735
Score = 622 bits (1604), Expect = e-177, Method: Compositional matrix adjust.
Identities = 321/466 (68%), Positives = 380/466 (81%), Gaps = 11/466 (2%)
Query: 3 EDLLVSGEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGLPE 62
E+ L+SGE+S + R RRR G ++F RR DAI GS YQKAAALVDLAEDGIGLPE
Sbjct: 2 EEYLLSGESSNSGRT----RRRIG--SIFDRR-DAIAHGSAYQKAAALVDLAEDGIGLPE 54
Query: 63 EILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYY 122
EIL+ +SFE +A+ YFIF +FD++WSLNY AL+VLNF EKPLWC+K SC +R+YY
Sbjct: 55 EILEGASFEKAAELYFIFTRFDFLWSLNYLALVVLNFFEKPLWCSKHLAE--SCNNRDYY 112
Query: 123 YLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADF 182
YLG+LP+LTG ESL++EG+TL++LIIH FPI+YEG ++W+S R+KV+ LLILVAD
Sbjct: 113 YLGELPFLTGAESLIFEGVTLLLLIIHILFPISYEGFNLYWRSLLNRVKVILLLILVADI 172
Query: 183 LVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFL 242
+VY L+L+ F +LP RIAPY+RVVFFILNIR+LRD+ F+LAGMLGTYLNV+AL LFL
Sbjct: 173 VVYILFLAD--FYYLPFRIAPYLRVVFFILNIRELRDSFFILAGMLGTYLNVVALSALFL 230
Query: 243 LFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVL 302
LFSSWLAYV FEDT QG FTS+GTTLYQMFVLFTTSNNPDVWIPAYK SRWYCLFFVL
Sbjct: 231 LFSSWLAYVFFEDTRQGKTTFTSYGTTLYQMFVLFTTSNNPDVWIPAYKDSRWYCLFFVL 290
Query: 303 YVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQC 362
YVL+GVYFVTNLILAVVYDSFKS+L KQV++ DR+R RTL KAF+LID N G LN++QC
Sbjct: 291 YVLLGVYFVTNLILAVVYDSFKSELVKQVADKDRLRLRTLKKAFSLIDEANNGHLNEKQC 350
Query: 363 IKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSC 422
LFEELNKYRTLP IS ++F+ IF ELDDT DFKINLDEFADLC AI LRFQKED
Sbjct: 351 TLLFEELNKYRTLPKISGDDFKSIFSELDDTGDFKINLDEFADLCTAIGLRFQKEDSLPI 410
Query: 423 FENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTV 468
FE P+ YHSP SEKL+ F+R F Y+I +L+VNLVAVI+ETT+
Sbjct: 411 FEACPNFYHSPASEKLRGFVRGATFEYIIVFVLLVNLVAVIIETTL 456
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 16/87 (18%)
Query: 269 TLYQMFVLFTTSNNPDVWIPAYK---ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKS 325
TL+ + V+ N VW+ +YK + W +FV + LI V ++ NLI+A V ++F++
Sbjct: 625 TLFNILVM----GNWQVWMQSYKELTGTAWTYAYFVSFYLISVLWLLNLIVAFVLEAFQA 680
Query: 326 QLAKQVS---------EMDRMRRRTLG 343
++ + S E RRR +G
Sbjct: 681 EVDLEASARCVDGDDKEAKSERRRNVG 707
>sp|Q75VR0|TPC1B_TOBAC Two pore calcium channel protein 1B OS=Nicotiana tabacum GN=TPC1B
PE=2 SV=1
Length = 735
Score = 603 bits (1554), Expect = e-171, Method: Compositional matrix adjust.
Identities = 320/466 (68%), Positives = 379/466 (81%), Gaps = 11/466 (2%)
Query: 3 EDLLVSGEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGLPE 62
E+ L+ GE+S + R RRR G ++F RR DAI GS YQKAAALVDLAEDGIGLPE
Sbjct: 2 EEYLLPGESSNSCRT----RRRSG--SIFDRR-DAIAHGSAYQKAAALVDLAEDGIGLPE 54
Query: 63 EILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYY 122
EIL+ +SFE +A+ YF+F +FD++WSLNY AL+VLNF EKPLWC+K SC +R+YY
Sbjct: 55 EILEGASFEKAAELYFMFTRFDFLWSLNYLALVVLNFFEKPLWCSKHLAE--SCNNRDYY 112
Query: 123 YLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADF 182
YLG+LP+LTG ESL++EG+TL++LIIH FPI+YEG ++W+S RLKV+ LLILVAD
Sbjct: 113 YLGELPFLTGAESLIFEGVTLLLLIIHILFPISYEGFNLYWRSLLNRLKVILLLILVADI 172
Query: 183 LVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFL 242
+VY L P F +LP RIAPY+RVVFFILNIR+LRD+ F+LAGMLGTYLNV+AL LFL
Sbjct: 173 VVY--ILLPADFYYLPFRIAPYLRVVFFILNIRELRDSFFILAGMLGTYLNVVALSALFL 230
Query: 243 LFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVL 302
LFSSWLAYV FEDT QG FTS+GTTLYQMFVLFTTSNNPDVWIPAYK SRWYCLFFVL
Sbjct: 231 LFSSWLAYVFFEDTRQGKTTFTSYGTTLYQMFVLFTTSNNPDVWIPAYKDSRWYCLFFVL 290
Query: 303 YVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQC 362
YVL+GVYFVTNLILAVVYDSFKS+L KQV++ DR+R RTL KAF+LID N G LN++QC
Sbjct: 291 YVLLGVYFVTNLILAVVYDSFKSELVKQVADKDRLRLRTLKKAFSLIDEANNGLLNEKQC 350
Query: 363 IKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSC 422
LFEELNKYRTLP IS ++F+ IF+ELDDT DFKINL+EFADLC+AI LRFQKED
Sbjct: 351 TLLFEELNKYRTLPKISGDDFKSIFNELDDTGDFKINLEEFADLCSAIGLRFQKEDSLPI 410
Query: 423 FENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTV 468
FE P+ YHSP SEKL+ FIR F Y+I +L+VNLVAVI+ETT+
Sbjct: 411 FEACPNFYHSPASEKLRGFIRGATFEYIIVFVLLVNLVAVIIETTL 456
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 16/87 (18%)
Query: 269 TLYQMFVLFTTSNNPDVWIPAYK---ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKS 325
TL+ + V+ N VW+ +YK + W +FV + LI V ++ NLI+A V ++F++
Sbjct: 625 TLFNILVM----GNWQVWMQSYKELTGTSWTYAYFVSFYLISVLWLLNLIVAFVLEAFQA 680
Query: 326 QLAKQVS---------EMDRMRRRTLG 343
++ + S E R RRR +G
Sbjct: 681 EMDLEASARCVDGDDKEAKRERRRNVG 707
>sp|Q5QM84|TPC1_ORYSJ Two pore calcium channel protein 1 OS=Oryza sativa subsp. japonica
GN=TPC1 PE=1 SV=2
Length = 757
Score = 538 bits (1386), Expect = e-152, Method: Compositional matrix adjust.
Identities = 270/441 (61%), Positives = 345/441 (78%), Gaps = 9/441 (2%)
Query: 31 FRRRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLN 90
++RR+DA+ G+ YQKAAALVDLAEDG+G+PE++L+ + FE + +FYF++++ D++WSLN
Sbjct: 50 YQRRSDALAYGNRYQKAAALVDLAEDGVGIPEDVLNDTRFERAMRFYFVYLRLDWLWSLN 109
Query: 91 YFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHT 150
FALI+LNFLEKPLWC G ++C R+ Y+LGQLPYL+ ESL+YEG+TLVIL++
Sbjct: 110 LFALILLNFLEKPLWC--RGYSQHACDQRDLYFLGQLPYLSKTESLIYEGLTLVILVMDI 167
Query: 151 FFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFF 210
F+P++YEG +FWK+T +LKVL L IL D LV+ AF+ P R+APYIRV F
Sbjct: 168 FYPLSYEGLNLFWKNTINKLKVLLLFILACDILVF-------AFSPQPFRVAPYIRVAFL 220
Query: 211 ILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTL 270
I+NIR+LR L GM+GTYLNVLAL LLFLLF+SWLAYV FEDT QG VF+S+GTTL
Sbjct: 221 IMNIRELRMCAVTLVGMVGTYLNVLALSLLFLLFASWLAYVTFEDTPQGKTVFSSYGTTL 280
Query: 271 YQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQ 330
YQMF+LFTTSNNPDVW+PAYK+SRW LFF++YVL+GVYF+TNLILAV+YDSFK QLAKQ
Sbjct: 281 YQMFILFTTSNNPDVWVPAYKSSRWSSLFFIVYVLLGVYFLTNLILAVIYDSFKEQLAKQ 340
Query: 331 VSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDEL 390
VS+ D R+ L KAF +ID G+LNKEQC+ L +ELNKYR+LP SRE+FELIF EL
Sbjct: 341 VSQADCTRKSILEKAFGIIDATGQGYLNKEQCLSLLDELNKYRSLPKTSREDFELIFAEL 400
Query: 391 DDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYM 450
D + DFK+ +EFA LCN IA++FQKE PS E PS YHS E LK+F+RS F Y+
Sbjct: 401 DQSGDFKVTSEEFATLCNTIAIKFQKEPPPSYLEKYPSFYHSALCEWLKSFVRSPLFEYI 460
Query: 451 ISIILIVNLVAVIVETTVWLE 471
+ +L++NLVAVI+ETT+ +E
Sbjct: 461 VIFVLLMNLVAVIIETTLDIE 481
>sp|Q6YLX9|TPC1_WHEAT Two pore calcium channel protein 1 OS=Triticum aestivum GN=TPC1
PE=2 SV=1
Length = 742
Score = 528 bits (1360), Expect = e-149, Method: Compositional matrix adjust.
Identities = 271/469 (57%), Positives = 349/469 (74%), Gaps = 11/469 (2%)
Query: 3 EDLLVSGEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGLPE 62
E+ G AS +R + +G +RRR+DA+ G YQKAAALVDLAEDG+G+PE
Sbjct: 11 EEAAERGLASSGSRRLSDGAGGQGSRK-YRRRSDALAYGDRYQKAAALVDLAEDGVGIPE 69
Query: 63 EILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYY 122
++L+ + F + FYF++++ D++WSLN FALI+LNFLEKPLWC K + Y R+ Y
Sbjct: 70 DVLNDTRFGRAMSFYFVYLRLDWLWSLNLFALILLNFLEKPLWCRKDALQAYD--QRDLY 127
Query: 123 YLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADF 182
+LGQLPY + ESL+YEG+TLVIL++ F P++YEG IFW+ST +LK++ L IL D
Sbjct: 128 FLGQLPYFSKTESLIYEGLTLVILVMDIFCPLSYEGLNIFWRSTTNKLKIVLLFILACDI 187
Query: 183 LVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFL 242
LV+ AF+ P R+APYIRVVF I+ IR+LR LAG++GTYLNVLAL LLFL
Sbjct: 188 LVF-------AFSSQPFRLAPYIRVVFLIMTIRELRMCAITLAGLIGTYLNVLALSLLFL 240
Query: 243 LFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVL 302
LF+SWLAYV FEDT QG +F+S+G TLYQMFVLFTTSNNPDVW+ AYK RWY LFF++
Sbjct: 241 LFASWLAYVTFEDTPQGKTIFSSYGVTLYQMFVLFTTSNNPDVWVHAYKIPRWYSLFFIV 300
Query: 303 YVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQC 362
YVL+GVYF+TNLILAV+YDSFK Q AKQ+ ++D +R+ L KAF+LID N G+L++EQC
Sbjct: 301 YVLLGVYFLTNLILAVIYDSFKEQFAKQLVQVDSIRKNILQKAFDLIDTNNRGYLDREQC 360
Query: 363 IKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSC 422
I L ELNKYR+LP SRE+FELIF ELD + DFK+ +EFADLCN IA++FQKE PS
Sbjct: 361 ISLLNELNKYRSLPKTSREDFELIFAELDRSGDFKVTSEEFADLCNTIAIKFQKEPPPSY 420
Query: 423 FENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTVWLE 471
E P YHSP +LK+F+RS F Y+I +L++NLVAVI+ETT+ +E
Sbjct: 421 LEKFP-FYHSPLCGRLKSFVRSRMFEYIIVFVLLINLVAVIIETTLDIE 468
>sp|Q6S5H8|TPC1_HORVU Two pore calcium channel protein 1 OS=Hordeum vulgare GN=TPC1 PE=2
SV=1
Length = 742
Score = 519 bits (1336), Expect = e-146, Method: Compositional matrix adjust.
Identities = 272/469 (57%), Positives = 350/469 (74%), Gaps = 11/469 (2%)
Query: 3 EDLLVSGEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGLPE 62
E+ G AS +R + +G +RRR+DA+ G YQKAAALVDLAEDG+G+PE
Sbjct: 11 EEAAERGLASSGSRRLSDGGGGQGSRK-YRRRSDALAHGDRYQKAAALVDLAEDGVGIPE 69
Query: 63 EILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYY 122
++L+ + F + FYF++++ D++WSLN FALI+LNFLEKPLWC K + ++C R+ Y
Sbjct: 70 DVLNDTRFGRAMSFYFVYLRLDWLWSLNIFALILLNFLEKPLWCRKDAL--HACDQRDMY 127
Query: 123 YLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADF 182
+LGQLPY + ESL+YEG+TLVIL++ P++YEG IFW+ST +LK+L L IL D
Sbjct: 128 FLGQLPYFSKTESLIYEGLTLVILVMEILCPLSYEGLNIFWRSTTNKLKILLLFILACDI 187
Query: 183 LVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFL 242
LV+ AF+ P R+APYIRVVF I+ IR+LR LAG++GTYLNVLAL LLFL
Sbjct: 188 LVF-------AFSSQPFRLAPYIRVVFLIMTIRELRMCAITLAGLIGTYLNVLALSLLFL 240
Query: 243 LFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVL 302
LF+SWLAYV FEDT QG +F+S+G TLYQMFVLFTTSNNPDVW+PAYK SRWY LFF++
Sbjct: 241 LFASWLAYVTFEDTPQGKTIFSSYGVTLYQMFVLFTTSNNPDVWVPAYKISRWYSLFFIV 300
Query: 303 YVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQC 362
YVL+GVYF+TNLILAV+YDSFK Q AKQ+ ++D +R+ L KAF LID G+L++EQC
Sbjct: 301 YVLLGVYFLTNLILAVIYDSFKEQFAKQLVQVDAIRKNILQKAFELIDTNTRGYLDREQC 360
Query: 363 IKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSC 422
I L ELNKYR+LP SRE+FELIF ELD + DFK+ +EFADLCN IA++FQKE PS
Sbjct: 361 ISLLNELNKYRSLPKTSREDFELIFAELDRSGDFKVTSEEFADLCNTIAIKFQKEPPPSY 420
Query: 423 FENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTVWLE 471
E P YHSP +LK+F+RS F Y+I +L++NLVAVI+ETT+ +E
Sbjct: 421 LEKFP-FYHSPVCGRLKSFVRSRTFEYIIVFVLLINLVAVIIETTLDIE 468
>sp|Q9ULQ1|TPC1_HUMAN Two pore calcium channel protein 1 OS=Homo sapiens GN=TPCN1 PE=1
SV=3
Length = 816
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 112/206 (54%), Gaps = 8/206 (3%)
Query: 263 FTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDS 322
F++ ++ +FVL TT+N PDV +P+Y + W C+FF++Y+ I +YF+ NL+LAVV+D+
Sbjct: 263 FSTLENSIVSLFVLLTTANFPDVMMPSYSRNPWSCVFFIVYLSIELYFIMNLLLAVVFDT 322
Query: 323 FKSQLAKQVSEMDRMRRRTLGKAFN-LIDNYNVGFLNKEQCIKLFEELNKYRTLPNISRE 381
F ++ + +R + A+ LI ++ Q FE L ++ P +S
Sbjct: 323 FNDIEKRKFKSLLLHKRTAIQHAYRLLISQRRPAGISYRQ----FEGLMRFYK-PRMSAR 377
Query: 382 EFELIFDELDDTHDFKINLDEFADLCNAIALRFQ-KEDVPSCFENLPSIYHSPFSEKLKA 440
E L F L+ + ++L +F D+ AL+++ K++ F+ LP F + +
Sbjct: 378 ERYLTFKALNQNNTPLLSLKDFYDIYEVAALKWKAKKNREHWFDELPRTALLIF-KGINI 436
Query: 441 FIRSTKFGYMISIILIVNLVAVIVET 466
++S F Y + +++ VN V ++VET
Sbjct: 437 LVKSKAFQYFMYLVVAVNGVWILVET 462
>sp|Q9WTN5|TPC1_RAT Two pore calcium channel protein 1 OS=Rattus norvegicus GN=Tpcn1
PE=1 SV=2
Length = 817
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 111/206 (53%), Gaps = 8/206 (3%)
Query: 263 FTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDS 322
F + ++ +FVL TT+N PDV +P+Y + W C+FF++Y+ I +YF+ NL+LAVV+D+
Sbjct: 264 FNTLENSIVNLFVLLTTANFPDVMMPSYSRNPWSCVFFIVYLSIELYFIMNLLLAVVFDT 323
Query: 323 FKSQLAKQVSEMDRMRRRTLGKAFN-LIDNYNVGFLNKEQCIKLFEELNKYRTLPNISRE 381
F + + +R + A++ L+ ++ Q FE L ++ P +S
Sbjct: 324 FNDIEKHKFKSLLLHKRTAIQHAYHLLVSQRRPAGISYRQ----FEGLMRFYK-PRMSAR 378
Query: 382 EFELIFDELDDTHDFKINLDEFADLCNAIALRFQ-KEDVPSCFENLPSIYHSPFSEKLKA 440
E L F L+ ++ ++L +F D+ AL+++ K++ F+ LP F + +
Sbjct: 379 ERFLTFKALNQSNTPLLSLKDFYDIYEVAALQWKAKKNRQHWFDELPRTAFLIF-KGINI 437
Query: 441 FIRSTKFGYMISIILIVNLVAVIVET 466
+ S F Y + +++ VN V ++VET
Sbjct: 438 LVNSKAFQYFMYLVVAVNGVWILVET 463
>sp|Q9EQJ0|TPC1_MOUSE Two pore calcium channel protein 1 OS=Mus musculus GN=Tpcn1 PE=2
SV=1
Length = 817
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 111/207 (53%), Gaps = 10/207 (4%)
Query: 263 FTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDS 322
F++ ++ +FVL TT+N PDV +P+Y + W C+FF++Y+ I +YF+ NL+LAVV+D+
Sbjct: 264 FSTLENSIVNLFVLLTTANFPDVMMPSYSRNPWSCVFFIVYLSIELYFIMNLLLAVVFDT 323
Query: 323 FKSQLAKQVSEMDRMRRRTLGKAFNLIDNYN--VGFLNKEQCIKLFEELNKYRTLPNISR 380
F + + +R + A+ L+ + G ++ FE L ++ P +S
Sbjct: 324 FNDIEKHKFKSLLLHKRTAIQHAYGLLASQRRPAGISYRQ-----FEGLMRFYK-PRMSA 377
Query: 381 EEFELIFDELDDTHDFKINLDEFADLCNAIALRFQ-KEDVPSCFENLPSIYHSPFSEKLK 439
E L F L+ ++ ++L +F D+ AL+++ K + F+ LP F + +
Sbjct: 378 RERFLTFKALNQSNTPLLSLKDFYDIYEVAALQWKAKRNRQHWFDELPRTAFLIF-KGIN 436
Query: 440 AFIRSTKFGYMISIILIVNLVAVIVET 466
+ S F Y + +++ VN V ++VET
Sbjct: 437 ILVNSKAFQYFMYLVVAVNGVWILVET 463
>sp|Q8NHX9|TPC2_HUMAN Two pore calcium channel protein 2 OS=Homo sapiens GN=TPCN2 PE=1
SV=2
Length = 752
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 127/279 (45%), Gaps = 22/279 (7%)
Query: 198 PLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNV---LALGL-LFLLFSSWLAYVIF 253
PLRI +R F + N ++ TL + L +V LA+ L LF +F L
Sbjct: 183 PLRIRRLLRPFFLLQNSSMMKKTLKCIRWSLPEMASVGLLLAIHLCLFTMFGMLLFAGGK 242
Query: 254 EDTVQGNMVFTSFGT---TLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYF 310
+D Q T F +L + VL TT+NNPDV IPAY +R Y +FF+++ +IG F
Sbjct: 243 QDDGQDRERLTYFQNLPESLTSLLVLLTTANNPDVMIPAYSKNRAYAIFFIVFTVIGSLF 302
Query: 311 VTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNY--NVGFLNKEQCIK---L 365
+ NL+ A++Y F+ L K + RR AF ++ + G + +K L
Sbjct: 303 LMNLLTAIIYSQFRGYLMKSLQTSLFRRRLGTRAAFEVLSSMVGEGGAFPQAVGVKPQNL 362
Query: 366 FEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFEN 425
+ L K + + + + +++ ++ +EF L N + KE P
Sbjct: 363 LQVLQKVQ----LDSSHKQAMMEKVRSYGSVLLSAEEFQKLFNELDRSVVKEHPPR---- 414
Query: 426 LPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIV 464
P Y SPF + + F Y+ ++I + NLV++ V
Sbjct: 415 -PE-YQSPFLQSAQFLFGHYYFDYLGNLIALANLVSICV 451
>sp|Q8BWC0|TPC2_MOUSE Two pore calcium channel protein 2 OS=Mus musculus GN=Tpcn2 PE=1
SV=1
Length = 731
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 22/279 (7%)
Query: 198 PLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNV---LALGLLFLLFSSWLAYVIFE 254
PLR+ +R F + N ++ TL + L +V LA+ L L + I E
Sbjct: 167 PLRMRRLLRPFFLLQNSSMMKKTLKCIRWSLPEMASVGLLLAIHLCLFTIIGMLLFTIGE 226
Query: 255 -DTVQGN---MVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYF 310
D Q F + L + VL TTSNNPDV IPAY +R + LFF+++ LIG F
Sbjct: 227 KDEAQDQERLAYFRNLPEALTSLLVLLTTSNNPDVMIPAYTQNRAFALFFIVFTLIGSLF 286
Query: 311 VTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELN 370
+ NL+ A++Y+ F+ L K + + RRR +A + G +N
Sbjct: 287 LMNLLTAIIYNQFRGYLMKSL-QTSLFRRRLGARAAYEVLASRAG---PAGTTPELVGVN 342
Query: 371 KYRTLPNISREEF-----ELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFEN 425
LP + + + + I ++ + DEF L + + KE
Sbjct: 343 PETFLPVLQKTQLNKTHKQAIMQKVQSYEGRPMLADEFQKLFDEVDKGLAKE------RP 396
Query: 426 LPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIV 464
L Y SPF + + F Y+ +++ + NL+++ V
Sbjct: 397 LKPQYQSPFLQTAQFIFSHHYFDYLGNLVALGNLLSICV 435
>sp|A0JMD4|TPC2_DANRE Two pore calcium channel protein 2 OS=Danio rerio GN=tpcn2 PE=2
SV=1
Length = 774
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 34/284 (11%)
Query: 139 EGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILV-ADFLVYGLYLSPIAFNFL 197
EGI +V L I +T +G I W+ +L LI++ A + + L +S +
Sbjct: 140 EGIEIVCLCIF-ILDVTAKGYLIGWEEFRMNKWLLAYLIVITASVIDWMLSISMLCDE-- 196
Query: 198 PLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIF---E 254
LR+ IR F + N ++ TL + L +V+ L L + + + +IF +
Sbjct: 197 NLRVRRLIRPFFLLQNSSLMKKTLKCIKRTLPEIASVILLLALHICLFTMIGMLIFAKSD 256
Query: 255 DTVQG---NMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFV 311
D Q F + L + VL TT+NNPDV IPAY +R Y +FF+L+ + G Y +
Sbjct: 257 DPKQNGEWQTYFRNLPKALSSLLVLLTTANNPDVMIPAYSLNRGYSIFFILFSVFGTYLL 316
Query: 312 TNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKE----------- 360
NL+ A++Y+ F+ L V RR + AF ++ G + +
Sbjct: 317 MNLMTAIIYNQFRGYLLMSVQTSIIRRRLGIRAAFEVLCCPGRGHTSTQAEGHVERVAVS 376
Query: 361 QCIKLFEELN-----------KYRTLPN--ISREEFELIFDELD 391
+K+ E ++ R P+ IS E+F+ +F+ELD
Sbjct: 377 MFLKVMERVHMKSYCRQAIVKAARRFPDGFISGEDFQRLFNELD 420
>sp|Q8BVN3|CTSR4_MOUSE Cation channel sperm-associated protein 4 OS=Mus musculus
GN=Catsper4 PE=1 SV=1
Length = 442
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 18/221 (8%)
Query: 119 REYYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLIL 178
R YLGQ Y + I L ILI G IFWK + L + IL
Sbjct: 88 RTNSYLGQKHYEL---FSTIDDIVLTILICEVLLG-WLNGFWIFWKDGWNILNFAIVFIL 143
Query: 179 VADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALG 238
F + L + I + PLR+ +R+V + + L + V+ + NV+AL
Sbjct: 144 FMGFFIKQLDMVAITY---PLRV---LRLVHVCMAVEPLARIIKVILQSMPDLANVMALI 197
Query: 239 LLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCL 298
L F+L S +F V + F + G LY +F+ T D++ R Y +
Sbjct: 198 LFFMLVFSVFGVTLFGAFVPKH--FQNMGVALYTLFICITQDGWLDIYTDFQMDEREYAM 255
Query: 299 ------FFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSE 333
+F +++ +G + NL + VV + + + E
Sbjct: 256 EVGGAIYFAVFITLGAFIGLNLFVVVVTTNLEQMMKTGEEE 296
>sp|Q14524|SCN5A_HUMAN Sodium channel protein type 5 subunit alpha OS=Homo sapiens
GN=SCN5A PE=1 SV=2
Length = 2016
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 254 EDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLYVLIGV 308
E+ G F SF +F L T D W Y+ A + Y +FF+L + +G
Sbjct: 346 ENPDHGYTSFDSFAWAFLALFRLMTQ----DCWERLYQQTLRSAGKIYMIFFMLVIFLGS 401
Query: 309 YFVTNLILAVVYDSFKSQLAKQVSEMDRMRRR 340
+++ NLILAVV +++ Q ++E + +R
Sbjct: 402 FYLVNLILAVVAMAYEEQNQATIAETEEKEKR 433
Score = 39.3 bits (90), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 172 VLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTY 231
+L ++ V ++ + SP F + R+A R++ I + +R LF L L
Sbjct: 1600 ILSIVGTVLSDIIQKYFFSPTLFRVI--RLARIGRILRLIRGAKGIRTLLFALMMSLPAL 1657
Query: 232 LNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSN----- 281
N+ L L L+ ++S + AYV +E + F +F ++ +F + T++
Sbjct: 1658 FNIGLLLFLVMFIYSIFGMANFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLL 1717
Query: 282 NP---------DVWIPAYKASRWYC-------LFFVLYVLIGVYFVTNLILAVVYDSF 323
+P D +P SR C LFF Y++I V N+ +A++ ++F
Sbjct: 1718 SPILNTGPPYCDPTLPNSNGSRGDCGSPAVGILFFTTYIIISFLIVVNMYIAIILENF 1775
Score = 33.1 bits (74), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 288 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFN 347
P ++ + + ++FV++++ G +F NL + V+ D+F Q K++ D K +N
Sbjct: 1438 PQWEYNLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQ-KKKLGGQDIFMTEEQKKYYN 1496
Query: 348 LIDNYNVGFLNKEQCIKLFEELNKYR 373
+ +K+ + LNKY+
Sbjct: 1497 AMKKLG----SKKPQKPIPRPLNKYQ 1518
>sp|Q9JJV9|SCN5A_MOUSE Sodium channel protein type 5 subunit alpha OS=Mus musculus
GN=Scn5a PE=1 SV=2
Length = 2019
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 254 EDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLYVLIGV 308
E+ G F SF +F L T D W Y+ A + Y +FF+L + +G
Sbjct: 346 ENPDHGYTSFDSFAWAFLALFRLMTQ----DCWERLYQQTLRSAGKIYMIFFMLVIFLGS 401
Query: 309 YFVTNLILAVVYDSFKSQLAKQVSEMDRMRRR 340
+++ NLILAVV +++ Q ++E + +R
Sbjct: 402 FYLVNLILAVVAMAYEEQNQATIAETEEKEKR 433
Score = 39.3 bits (90), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 172 VLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTY 231
+L ++ V ++ + SP F + R+A R++ I + +R LF L L
Sbjct: 1602 ILSIVGTVLSDIIQKYFFSPTLFRVI--RLARIGRILRLIRGAKGIRTLLFALMMSLPAL 1659
Query: 232 LNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSN----- 281
N+ L L L+ ++S + AYV +E + F +F ++ +F + T++
Sbjct: 1660 FNIGLLLFLVMFIYSIFGMANFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLL 1719
Query: 282 NP---------DVWIPAYKASRWYC-------LFFVLYVLIGVYFVTNLILAVVYDSF 323
+P D +P SR C LFF Y++I V N+ +A++ ++F
Sbjct: 1720 SPILNTGPPYCDPNLPNSNGSRGNCGSPAVGILFFTTYIIISFLIVVNMYIAIILENF 1777
Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 288 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFN 347
P ++ + + ++FV++++ G +F NL + V+ D+F Q K++ D K +N
Sbjct: 1440 PQWEDNLYMYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQ-KKKLGGQDIFMTEEQKKYYN 1498
Query: 348 LIDNYNVGFLNKEQCIKLFEELNKYR 373
+ +K+ + LNKY+
Sbjct: 1499 AMKKLG----SKKPQKPIPRPLNKYQ 1520
>sp|P15389|SCN5A_RAT Sodium channel protein type 5 subunit alpha OS=Rattus norvegicus
GN=Scn5a PE=2 SV=1
Length = 2019
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 254 EDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLYVLIGV 308
E+ G F SF +F L T D W Y+ A + Y +FF+L + +G
Sbjct: 347 ENPDHGYTSFDSFAWAFLALFRLMTQ----DCWERLYQQTLRSAGKIYMIFFMLVIFLGS 402
Query: 309 YFVTNLILAVVYDSFKSQLAKQVSEMDRMRRR 340
+++ NLILAVV +++ Q ++E + +R
Sbjct: 403 FYLVNLILAVVAMAYEEQNQATIAETEEKEKR 434
Score = 39.3 bits (90), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 172 VLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTY 231
+L ++ V ++ + SP F + R+A R++ I + +R LF L L
Sbjct: 1602 ILSIVGTVLSDIIQKYFFSPTLFRVI--RLARIGRILRLIRGAKGIRTLLFALMMSLPAL 1659
Query: 232 LNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSN----- 281
N+ L L L+ ++S + AYV +E + F +F ++ +F + T++
Sbjct: 1660 FNIGLLLFLVMFIYSIFGMANFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLL 1719
Query: 282 NP---------DVWIPAYKASRWYC-------LFFVLYVLIGVYFVTNLILAVVYDSF 323
+P D +P SR C LFF Y++I V N+ +A++ ++F
Sbjct: 1720 SPILNTGPPYCDPNLPNSNGSRGNCGSPAVGILFFTTYIIISFLIVVNMYIAIILENF 1777
Score = 32.7 bits (73), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 288 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFN 347
P ++ + + ++FV++++ G +F NL + V+ D+F Q K++ D K +N
Sbjct: 1440 PQWEDNLYMYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQ-KKKLGGQDIFMTEEQKKYYN 1498
Query: 348 LIDNYNVGFLNKEQCIKLFEELNKYR 373
+ +K+ + LNKY+
Sbjct: 1499 AMKKLG----SKKPQKPIPRPLNKYQ 1520
>sp|Q20JQ7|SC4AB_DANRE Sodium channel protein type 4 subunit alpha B OS=Danio rerio
GN=scn4ab PE=2 SV=1
Length = 1784
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 31/176 (17%)
Query: 175 LLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNV 234
L I +AD L+ ++SP F + R+A RV+ I + +R LF L L N+
Sbjct: 1372 LGIGLAD-LIEKYFVSPTLFRVI--RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNI 1428
Query: 235 -LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSN-------- 281
L L L+ +FS S AYV E + M F +FG ++ MF++ T++
Sbjct: 1429 GLLLFLIMFIFSIFGMSNFAYVKKEVGIDDMMNFETFGNSIICMFMITTSAGWDGLLAPI 1488
Query: 282 -------NPDVWIPAYKASRWYC-------LFFVLYVLIGVYFVTNLILAVVYDSF 323
+PDV P +R C +FF Y+++ V N+ +A++ ++F
Sbjct: 1489 LNSPPDCDPDVDNPG-STTRGNCGNAAVGIVFFCSYIVMSFLVVVNMYIAIILENF 1543
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 288 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 329
P Y+A+ + ++FV++++ G +F NL + V+ D+F Q AK
Sbjct: 1206 PVYEANLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAK 1247
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 259 GNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLYVLIGVYFVTN 313
G + +FG +F L T D W ++ A + Y +FFV+ + +G +++ N
Sbjct: 360 GYTSYDNFGWAFLALFRLMTQ----DFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLIN 415
Query: 314 LILAVVYDSFKSQ 326
LILAVV ++ Q
Sbjct: 416 LILAVVAMAYAEQ 428
>sp|Q25452|CAC1M_MUSDO Muscle calcium channel subunit alpha-1 OS=Musca domestica PE=2 SV=1
Length = 1687
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query: 229 GTYLNVL-ALGLLFLLFSSWLAYVIFEDTVQGN---MVFTSFGTTLYQMFVLFTTSNNPD 284
G YLN L L + F Y F+D V N F +FG ++ +F T D
Sbjct: 230 GEYLNDLDELHACGVGFKCPSGYECFDDWVGPNDGITNFDNFGLSMLTVFQCITLEGWTD 289
Query: 285 VW--IPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRR 340
V I S W ++FV V++G +FV NLIL V+ F + K + D + R
Sbjct: 290 VLYSIQDAMGSSWEWIYFVSMVILGAFFVMNLILGVLSGEFSKERTKAKNRGDFQKLR 347
>sp|Q91ZR5|CTSR1_MOUSE Cation channel sperm-associated protein 1 OS=Mus musculus
GN=Catsper1 PE=1 SV=1
Length = 686
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 170 LKVLCLLILVADFLVYGLY---LSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAG 226
+ VL ++L + L Y Y L I F +R IRV+ + + L + L+G
Sbjct: 425 MAVLDFVLLQINSLSYSFYNHSLFRILKVFKSMRALRAIRVLRRLSILTSLHEVAGTLSG 484
Query: 227 MLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVW 286
L + +L L L S + +F+D+ F + TTL+ +F + T + ++
Sbjct: 485 SLPSITAILTLMFTCLFLFSVVLRALFQDS--DPKRFQNIFTTLFTLFTMLTLDDWSLIY 542
Query: 287 IPAYKASRWYCL-FFVLYVLIGVYFVTNLILAVVYDSFKSQLAK-----QVSEMDRMRRR 340
I WY + ++Y++I + NL++AV+ D+F+ L K ++ + R+ +
Sbjct: 543 IDNRAQGAWYIIPILMIYIVIQYFIFLNLVIAVLVDNFQMALLKGLEKVKLEQAARVHEK 602
Query: 341 TLGKAFNLIDNYNVGFLNKEQCIKL 365
L + ++ + E+ +K+
Sbjct: 603 LLDDSLTDLNKADANAQMTEEALKM 627
>sp|Q62968|SCNAA_RAT Sodium channel protein type 10 subunit alpha OS=Rattus norvegicus
GN=Scn10a PE=1 SV=1
Length = 1956
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 263 FTSFGTTLYQMFVLFTTSNNPDVWIPAYKAS-RWYCLFFVLYVLIGVYFVTNLILAVVYD 321
F SF +F L T + ++ +AS + Y +FFVL + +G +++ NLILAVV
Sbjct: 338 FDSFAWAFLSLFRLMTQDSWERLYQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTM 397
Query: 322 SFKSQLAKQVSEMDRMRRR 340
+++ Q ++E++ ++
Sbjct: 398 AYEEQSQATIAEIEAKEKK 416
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 251 VIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDV-WIPAYKASRWYCLFFVLYVLIGVY 309
V F++ G + T M +++ ++ ++ P ++ + + L+FV++++ G +
Sbjct: 1349 VNFDNVAMGYLALLQVATFKGWMDIMYAAVDSGEINSQPNWENNLYMYLYFVVFIIFGGF 1408
Query: 310 FVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEEL 369
F NL + V+ D+F Q K++ D K +N + +K+ + L
Sbjct: 1409 FTLNLFVGVIIDNFNQQ-KKKLGGQDIFMTEEQKKYYNAMKKLG----SKKPQKPIPRPL 1463
Query: 370 NKYR--TLPNISREEFELI 386
NKY+ ++R+ F++I
Sbjct: 1464 NKYQGFVFDIVTRQAFDII 1482
>sp|Q6QIY3|SCNAA_MOUSE Sodium channel protein type 10 subunit alpha OS=Mus musculus
GN=Scn10a PE=1 SV=2
Length = 1958
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 263 FTSFGTTLYQMFVLFTTSNNPDVWIPAYKAS-RWYCLFFVLYVLIGVYFVTNLILAVVYD 321
F SF +F L T + ++ +AS + Y +FFVL + +G +++ NLILAVV
Sbjct: 338 FDSFAWAFLSLFRLMTQDSWERLYQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTM 397
Query: 322 SFKSQLAKQVSEMDRMRRR 340
+++ Q ++E++ ++
Sbjct: 398 AYEEQSQATIAEIEAKEKK 416
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 251 VIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDV-WIPAYKASRWYCLFFVLYVLIGVY 309
V F++ G + T M +++ ++ D+ P ++ S + L+FV++++ G +
Sbjct: 1349 VNFDNVAMGYLALLQVATFKGWMDIMYAAVDSRDINSQPNWEESLYMYLYFVVFIIFGGF 1408
Query: 310 FVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEEL 369
F NL + V+ D+F Q K++ D K +N + +K+ + L
Sbjct: 1409 FTLNLFVGVIIDNFNQQ-KKKLGGQDIFMTEEQKKYYNAMKKLG----SKKPQKPIPRPL 1463
Query: 370 NKYR--TLPNISREEFELI 386
NKY+ ++R+ F++I
Sbjct: 1464 NKYQGFVFDIVTRQAFDII 1482
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 31/180 (17%)
Query: 175 LLILVADFLVYGLYLSPIAFNFLP-----LRIAPYIRVVFFILNIRQLRDTLFVLAGMLG 229
++IL L++ LS + F P +R+A R++ I + +R LF L L
Sbjct: 1547 VVILSISSLLFSAILSSLESYFSPTLLRVIRLARIGRILRLIRAAKGIRTLLFALMMSLP 1606
Query: 230 TYLNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPD 284
N+ L L L+ ++S + A VI E + F +FG ++ +F + T++
Sbjct: 1607 ALFNIGLLLFLVMFIYSIFGMASFANVIDEAGIDDMFNFKTFGNSMLCLFQITTSAGWDG 1666
Query: 285 VWIPAYKASRWYC---------------------LFFVLYVLIGVYFVTNLILAVVYDSF 323
+ P YC LFF Y++I V N+ +AV+ ++F
Sbjct: 1667 LLSPILNTGPPYCDPNRPNSNGSKGNCGSPAVGILFFTTYIIISFLIVVNMYIAVILENF 1726
>sp|Q24270|CAC1D_DROME Voltage-dependent calcium channel type D subunit alpha-1
OS=Drosophila melanogaster GN=Ca-alpha1D PE=1 SV=2
Length = 2516
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 233 NVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVW--IPAY 290
N+ G+ + + Y ++ G F +FG + +F T DV I
Sbjct: 789 NIRPCGVGYQCPPGYKCYGGWDGPNDGITNFDNFGLAMLTVFQCVTLEGWTDVLYSIQDA 848
Query: 291 KASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQL--AKQVSEMDRMRRR 340
S W ++F+ V++G +FV NLIL V+ F + AK + ++R +
Sbjct: 849 MGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKERNKAKNRGDFQKLREK 900
>sp|O95180|CAC1H_HUMAN Voltage-dependent T-type calcium channel subunit alpha-1H OS=Homo
sapiens GN=CACNA1H PE=1 SV=4
Length = 2353
Score = 40.8 bits (94), Expect = 0.025, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 11/148 (7%)
Query: 199 LRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFE---- 254
LR +RV+ + + LR L VL + L +LF+ S L +F
Sbjct: 883 LRTFRLLRVLKLVRFLPALRRQLVVLVKTMDNVATFCTLLMLFIFIFSILGMHLFGCKFS 942
Query: 255 ------DTVQGNMVFTSFGTTLYQMFVLFTTSN-NPDVWIPAYKASRWYCLFFVLYVLIG 307
DTV F S + +F + T + N ++ S W L+FV + G
Sbjct: 943 LKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFG 1002
Query: 308 VYFVTNLILAVVYDSFKSQLAKQVSEMD 335
Y + NL++A++ + F+++ S+ D
Sbjct: 1003 NYVLFNLLVAILVEGFQAEGDANRSDTD 1030
Score = 38.1 bits (87), Expect = 0.15, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 259 GNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWY-CLFFVLYVLIGVYFVTNLILA 317
G + F + G +F + T D+ A +Y ++F+L +++G +F+ NL L
Sbjct: 357 GAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLV 416
Query: 318 VVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKY 372
V+ F ++ M R R L D+ F C +EEL KY
Sbjct: 417 VIATQFSETKQRESQLMREQRARHLSN-----DSTLASFSEPGSC---YEELLKY 463
Score = 35.0 bits (79), Expect = 1.3, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 19/76 (25%)
Query: 263 FTSFGTTLYQMFVLFTTSNNPDVWI---------------PAYKASRWYCLFFVLYVLIG 307
F + G L +FVL ++ D W+ P + W L+F+ ++LI
Sbjct: 1487 FDNLGQALMSLFVL----SSKDGWVNIMYDGLDAVGVDQQPVQNHNPWMLLYFISFLLIV 1542
Query: 308 VYFVTNLILAVVYDSF 323
+FV N+ + VV ++F
Sbjct: 1543 SFFVLNMFVGVVVENF 1558
>sp|Q7RTX7|CTSR4_HUMAN Cation channel sperm-associated protein 4 OS=Homo sapiens
GN=CATSPER4 PE=1 SV=1
Length = 472
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 78/191 (40%), Gaps = 16/191 (8%)
Query: 161 IFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDT 220
IFWK + L + + IL+ F + + + I + LR+ V + + L
Sbjct: 150 IFWKDGWNILNFIIVFILLLRFFINEINIPSINYTLRALRL------VHVCMAVEPLARI 203
Query: 221 LFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTS 280
+ V+ + N++ L L F+L S +F V + F + LY +F+ T
Sbjct: 204 IRVILQSVPDMANIMVLILFFMLVFSVFGVTLFGAFVPKH--FQNIQVALYTLFICITQD 261
Query: 281 NNPDVWIPAYKASRWYCL------FFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEM 334
D++ R Y + +F +++ IG + NL + VV + + + + E
Sbjct: 262 GWVDIYSDFQTEKREYAMEIGGAIYFTIFITIGAFIGINLFVIVVTTNLEQMM--KAGEQ 319
Query: 335 DRMRRRTLGKA 345
+ +R T +
Sbjct: 320 GQQQRITFSET 330
>sp|P51879|ONCO_MOUSE Oncomodulin OS=Mus musculus GN=Ocm PE=2 SV=2
Length = 109
Score = 40.4 bits (93), Expect = 0.030, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 321 DSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRT-LPNIS 379
D+F+ Q Q S + +M L F IDN G+L++++ +K F L ++++ ++
Sbjct: 23 DTFEPQKFFQTSGLSKMSASQLKDIFQFIDNDQSGYLDEDE-LKYF--LQRFQSDARELT 79
Query: 380 REEFELIFDELDDTHDFKINLDEFADLCNA 409
E + + D D+ D KI DEF ++ ++
Sbjct: 80 ESETKSLMDAADNDGDGKIGADEFQEMVHS 109
>sp|Q9WTU3|SCN8A_MOUSE Sodium channel protein type 8 subunit alpha OS=Mus musculus
GN=Scn8a PE=1 SV=1
Length = 1978
Score = 40.4 bits (93), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 260 NMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLYVLIGVYFVTNL 314
N +TSF T + LF D W Y+ A + Y +FFVL + +G +++ NL
Sbjct: 347 NYGYTSFDTFSWAFLALFRLMTQ-DYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNL 405
Query: 315 ILAVVYDSFKSQLAKQVSEMDR 336
ILAVV +++ Q + E ++
Sbjct: 406 ILAVVAMAYEEQNQATLEEAEQ 427
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 34/196 (17%)
Query: 172 VLCLLILVADFL---VYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGML 228
V+ +L +V FL + ++SP F + R+A R++ I + +R LF L L
Sbjct: 1589 VVVILSIVGMFLADIIEKYFVSPTLFRVI--RLARIGRILRLIKGAKGIRTLLFALMMSL 1646
Query: 229 GTYLNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSN-- 281
N+ L L L+ +FS S AYV E + F +FG ++ +F + T++
Sbjct: 1647 PALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWD 1706
Query: 282 ---------NPDVWIPAYKASRWY----------CLFFVLYVLIGVYFVTNLILAVVYDS 322
PD + + FFV Y++I V N+ +A++ ++
Sbjct: 1707 GLLLPILNRPPDCSLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILEN 1766
Query: 323 FK---SQLAKQVSEMD 335
F + A +SE D
Sbjct: 1767 FSVATEESADPLSEDD 1782
Score = 35.8 bits (81), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 280 SNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 329
S PD P Y+ + + ++FV++++ G +F NL + V+ D+F Q K
Sbjct: 1423 SRKPDEQ-PDYEGNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK 1471
>sp|O88420|SCN8A_RAT Sodium channel protein type 8 subunit alpha OS=Rattus norvegicus
GN=Scn8a PE=1 SV=1
Length = 1978
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 260 NMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLYVLIGVYFVTNL 314
N +TSF T + LF D W Y+ A + Y +FFVL + +G +++ NL
Sbjct: 347 NYGYTSFDTFSWAFLALFRLMTQ-DYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNL 405
Query: 315 ILAVVYDSFKSQLAKQVSEMDR 336
ILAVV +++ Q + E ++
Sbjct: 406 ILAVVAMAYEEQNQATLEEAEQ 427
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 34/196 (17%)
Query: 172 VLCLLILVADFL---VYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGML 228
V+ +L +V FL + ++SP F + R+A R++ I + +R LF L L
Sbjct: 1589 VVVILSIVGMFLADIIEKYFVSPTLFRVI--RLARIGRILRLIKGAKGIRTLLFALMMSL 1646
Query: 229 GTYLNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSN-- 281
N+ L L L+ +FS S AYV E + F +FG ++ +F + T++
Sbjct: 1647 PALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWD 1706
Query: 282 ---------NPDVWIPAYKASRWY----------CLFFVLYVLIGVYFVTNLILAVVYDS 322
PD + + FFV Y++I V N+ +A++ ++
Sbjct: 1707 GLLLPILNRPPDCSLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILEN 1766
Query: 323 FK---SQLAKQVSEMD 335
F + A +SE D
Sbjct: 1767 FSVATEESADPLSEDD 1782
Score = 35.8 bits (81), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 280 SNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 329
S PD P Y+ + + ++FV++++ G +F NL + V+ D+F Q K
Sbjct: 1423 SRKPDEQ-PDYEGNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK 1471
>sp|Q9UQD0|SCN8A_HUMAN Sodium channel protein type 8 subunit alpha OS=Homo sapiens
GN=SCN8A PE=1 SV=1
Length = 1980
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 260 NMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLYVLIGVYFVTNL 314
N +TSF T + LF D W Y+ A + Y +FFVL + +G +++ NL
Sbjct: 347 NYGYTSFDTFSWAFLALFRLMTQ-DYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNL 405
Query: 315 ILAVVYDSFKSQLAKQVSEMDR 336
ILAVV +++ Q + E ++
Sbjct: 406 ILAVVAMAYEEQNQATLEEAEQ 427
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 34/196 (17%)
Query: 172 VLCLLILVADFL---VYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGML 228
V+ +L +V FL + ++SP F + R+A R++ I + +R LF L L
Sbjct: 1591 VVVILSIVGMFLADIIEKYFVSPTLFRVI--RLARIGRILRLIKGAKGIRTLLFALMMSL 1648
Query: 229 GTYLNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSN-- 281
N+ L L L+ +FS S AYV E + F +FG ++ +F + T++
Sbjct: 1649 PALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWD 1708
Query: 282 ---------NPDVWIPAYKASRWY----------CLFFVLYVLIGVYFVTNLILAVVYDS 322
PD + + FFV Y++I V N+ +A++ ++
Sbjct: 1709 GLLLPILNRPPDCSLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILEN 1768
Query: 323 FK---SQLAKQVSEMD 335
F + A +SE D
Sbjct: 1769 FSVATEESADPLSEDD 1784
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 280 SNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 329
S PD P Y+ + + ++FV++++ G +F NL + V+ D+F Q K
Sbjct: 1425 SRKPDEQ-PKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK 1473
>sp|Q9EQ60|CAC1H_RAT Voltage-dependent T-type calcium channel subunit alpha-1H OS=Rattus
norvegicus GN=Cacna1h PE=2 SV=2
Length = 2359
Score = 40.0 bits (92), Expect = 0.039, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 11/154 (7%)
Query: 199 LRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFE---- 254
LR +RV+ + + LR L VL + L +LF+ S L +F
Sbjct: 880 LRTFRLLRVLKLVRFLPALRRQLVVLMRTMDNVATFCMLLMLFIFIFSILGMHLFGCKFS 939
Query: 255 ------DTVQGNMVFTSFGTTLYQMFVLFTTSN-NPDVWIPAYKASRWYCLFFVLYVLIG 307
DTV F S + +F + T + N ++ S W L+FV + G
Sbjct: 940 LKTDSGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFG 999
Query: 308 VYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRT 341
Y + NL++A++ + F+++ S+ D + T
Sbjct: 1000 NYVLFNLLVAILVEGFQAEGDATRSDTDEDKTST 1033
Score = 35.0 bits (79), Expect = 1.3, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 19/76 (25%)
Query: 263 FTSFGTTLYQMFVLFTTSNNPDVWI---------------PAYKASRWYCLFFVLYVLIG 307
F + G L +FVL ++ D W+ P + W L+F+ ++LI
Sbjct: 1498 FDNLGQALMSLFVL----SSKDGWVNIMYDGLDAVGIDQQPVQNHNPWMLLYFISFLLIV 1553
Query: 308 VYFVTNLILAVVYDSF 323
+FV N+ + VV ++F
Sbjct: 1554 SFFVLNMFVGVVVENF 1569
>sp|O88427|CAC1H_MOUSE Voltage-dependent T-type calcium channel subunit alpha-1H OS=Mus
musculus GN=Cacna1h PE=2 SV=3
Length = 2365
Score = 40.0 bits (92), Expect = 0.039, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 11/154 (7%)
Query: 199 LRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFE---- 254
LR +RV+ + + LR L VL + L +LF+ S L +F
Sbjct: 880 LRTFRLLRVLKLVRFLPALRRQLVVLMRTMDNVATFCMLLMLFIFIFSILGMHLFGCKFS 939
Query: 255 ------DTVQGNMVFTSFGTTLYQMFVLFTTSN-NPDVWIPAYKASRWYCLFFVLYVLIG 307
DTV F S + +F + T + N ++ S W L+FV + G
Sbjct: 940 LKTDSGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFG 999
Query: 308 VYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRT 341
Y + NL++A++ + F+++ S+ D + T
Sbjct: 1000 NYVLFNLLVAILVEGFQAEGDATRSDTDEDKTST 1033
Score = 37.7 bits (86), Expect = 0.20, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 259 GNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWY-CLFFVLYVLIGVYFVTNLILA 317
G + F + G +F + T D+ A +Y ++F+L +++G +F+ NL L
Sbjct: 357 GAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLV 416
Query: 318 VVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKY 372
V+ F ++ M R R L D+ F C +EEL KY
Sbjct: 417 VIATQFSETKQRENQLMREQRARYLSN-----DSTLASFSEPGSC---YEELLKY 463
Score = 35.0 bits (79), Expect = 1.3, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 19/76 (25%)
Query: 263 FTSFGTTLYQMFVLFTTSNNPDVWI---------------PAYKASRWYCLFFVLYVLIG 307
F + G L +FVL ++ D W+ P + W L+F+ ++LI
Sbjct: 1498 FDNLGQALMSLFVL----SSKDGWVNIMYDGLDAVGIDQQPVQNHNPWMLLYFISFLLIV 1553
Query: 308 VYFVTNLILAVVYDSF 323
+FV N+ + VV ++F
Sbjct: 1554 SFFVLNMFVGVVVENF 1569
>sp|O54898|CAC1G_RAT Voltage-dependent T-type calcium channel subunit alpha-1G OS=Rattus
norvegicus GN=Cacna1g PE=2 SV=2
Length = 2254
Score = 40.0 bits (92), Expect = 0.046, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 18/133 (13%)
Query: 258 QGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWY-CLFFVLYVLIGVYFVTNLIL 316
+G + F + G +F + T D+ A +Y ++F+L +++G +F+ NL L
Sbjct: 332 KGAINFDNIGYAWIAIFQVITLEGWVDIMYFVMDAHSFYNFIYFILLIIVGSFFMINLCL 391
Query: 317 AVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKY---- 372
V+ F ++ M R R L A L F C +EEL KY
Sbjct: 392 VVIATQFSETKQRESQLMREQRVRFLSNASTL-----ASFSEPGSC---YEELLKYLVYI 443
Query: 373 -----RTLPNISR 380
R L +SR
Sbjct: 444 LRKAARRLAQVSR 456
Score = 36.6 bits (83), Expect = 0.44, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 12/149 (8%)
Query: 199 LRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFE---- 254
LR +RV+ + + L+ L VL + L +LF+ S L +F
Sbjct: 834 LRTFRLMRVLKLVRFLPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFA 893
Query: 255 -----DTVQGNMVFTSFGTTLYQMFVLFTTSN-NPDVWIPAYKASRWYCLFFVLYVLIGV 308
DT+ F S + +F + T + N ++ S W L+F+ + G
Sbjct: 894 SERDGDTLPDRKNFDSLLWAIVTVFQILTQEDWNKVLYNGMASTSSWAALYFIALMTFGN 953
Query: 309 YFVTNLILAVVYDSFKSQ--LAKQVSEMD 335
Y + NL++A++ + F+++ K SE D
Sbjct: 954 YVLFNLLVAILVEGFQAEGDATKSESEPD 982
Score = 35.0 bits (79), Expect = 1.5, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 263 FTSFGTTLYQMFVLFTTSNNPDVWI-----------PAYKASRWYCLFFVLYVLIGVYFV 311
F + G L +FVL + D+ P + W L+F+ ++LI +FV
Sbjct: 1448 FDNLGQALMSLFVLASKDGWVDIMYDGLDAVGVDQQPIMNHNPWMLLYFISFLLIVAFFV 1507
Query: 312 TNLILAVVYDSF 323
N+ + VV ++F
Sbjct: 1508 LNMFVGVVVENF 1519
>sp|O43497|CAC1G_HUMAN Voltage-dependent T-type calcium channel subunit alpha-1G OS=Homo
sapiens GN=CACNA1G PE=2 SV=3
Length = 2377
Score = 40.0 bits (92), Expect = 0.046, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 18/133 (13%)
Query: 258 QGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWY-CLFFVLYVLIGVYFVTNLIL 316
+G + F + G +F + T D+ A +Y ++F+L +++G +F+ NL L
Sbjct: 332 KGAINFDNIGYAWIAIFQVITLEGWVDIMYFVMDAHSFYNFIYFILLIIVGSFFMINLCL 391
Query: 317 AVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKY---- 372
V+ F ++ M R R L A L F C +EEL KY
Sbjct: 392 VVIATQFSETKQRESQLMREQRVRFLSNASTL-----ASFSEPGSC---YEELLKYLVYI 443
Query: 373 -----RTLPNISR 380
R L +SR
Sbjct: 444 LRKAARRLAQVSR 456
Score = 36.2 bits (82), Expect = 0.52, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Query: 199 LRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFE---- 254
LR +RV+ + + L+ L VL + L +LF+ S L +F
Sbjct: 833 LRTFRLMRVLKLVRFLPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFA 892
Query: 255 -----DTVQGNMVFTSFGTTLYQMFVLFTTSN-NPDVWIPAYKASRWYCLFFVLYVLIGV 308
DT+ F S + +F + T + N ++ S W L+F+ + G
Sbjct: 893 SERDGDTLPDRKNFDSLLWAIVTVFQILTQEDWNKVLYNGMASTSSWAALYFIALMTFGN 952
Query: 309 YFVTNLILAVVYDSFKSQ 326
Y + NL++A++ + F+++
Sbjct: 953 YVLFNLLVAILVEGFQAE 970
Score = 35.0 bits (79), Expect = 1.5, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 263 FTSFGTTLYQMFVLFTTSNNPDVWI-----------PAYKASRWYCLFFVLYVLIGVYFV 311
F + G L +FVL + D+ P + W L+F+ ++LI +FV
Sbjct: 1469 FDNLGQALMSLFVLASKDGWVDIMYDGLDAVGVDQQPIMNHNPWMLLYFISFLLIVAFFV 1528
Query: 312 TNLILAVVYDSF 323
N+ + VV ++F
Sbjct: 1529 LNMFVGVVVENF 1540
>sp|P08104|SCN3A_RAT Sodium channel protein type 3 subunit alpha OS=Rattus norvegicus
GN=Scn3a PE=1 SV=1
Length = 1951
Score = 39.7 bits (91), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 249 AYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLY 303
Y+ + N +TSF T + LF D W Y+ A + Y +FFVL
Sbjct: 349 GYICVKAGRNPNYGYTSFDTFSWAFLSLFRLMTQ-DYWENLYQLTLRAAGKTYMIFFVLV 407
Query: 304 VLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDR 336
+ +G +++ NLILAVV +++ Q + E ++
Sbjct: 408 IFLGSFYLVNLILAVVAMAYEEQNQATLEEAEQ 440
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 37/198 (18%)
Query: 172 VLCLLILVADFL---VYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGML 228
V+ +L +V FL + ++SP F + R+A R++ I + +R LF L L
Sbjct: 1546 VVVILSIVGMFLAELIEKYFVSPTLFRVI--RLARIGRILRLIKGAKGIRTLLFALMMSL 1603
Query: 229 GTYLNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSN-- 281
N+ L L L+ +++ S AYV E + F +FG ++ +F + T++
Sbjct: 1604 PALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGIDDMFNFETFGNSMICLFQITTSAGWD 1663
Query: 282 --------------NPDVWIPAYKASRWYC-------LFFVLYVLIGVYFVTNLILAVVY 320
+PD P + + C FFV Y++I V N+ +AV+
Sbjct: 1664 GLLAPILNSAPPDCDPDAIHPG-SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVIL 1722
Query: 321 DSFK---SQLAKQVSEMD 335
++F + A+ +SE D
Sbjct: 1723 ENFSVATEESAEPLSEDD 1740
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 251 VIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWI-PAYKASRWYCLFFVLYVLIGVY 309
V F++ G + T M +++ ++ DV + P Y+ + + L+FV++++ G +
Sbjct: 1349 VNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDVKLQPIYEENLYMYLYFVIFIIFGSF 1408
Query: 310 FVTNLILAVVYDSFKSQLAK 329
F NL + V+ D+F Q K
Sbjct: 1409 FTLNLFIGVIIDNFNQQKKK 1428
>sp|Q9NY46|SCN3A_HUMAN Sodium channel protein type 3 subunit alpha OS=Homo sapiens
GN=SCN3A PE=1 SV=2
Length = 2000
Score = 39.7 bits (91), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 249 AYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLY 303
Y+ + N +TSF T + LF D W Y+ A + Y +FFVL
Sbjct: 349 GYICVKAGRNPNYGYTSFDTFSWAFLSLFRLMTQ-DYWENLYQLTLRAAGKTYMIFFVLV 407
Query: 304 VLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDR 336
+ +G +++ NLILAVV +++ Q + E ++
Sbjct: 408 IFLGSFYLVNLILAVVAMAYEEQNQATLEEAEQ 440
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 251 VIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWI-PAYKASRWYCLFFVLYVLIGVY 309
V F++ G + T M +++ ++ DV + P Y+ + + L+FV++++ G +
Sbjct: 1398 VNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDVKLQPVYEENLYMYLYFVIFIIFGSF 1457
Query: 310 FVTNLILAVVYDSFKSQLAK 329
F NL + V+ D+F Q K
Sbjct: 1458 FTLNLFIGVIIDNFNQQKKK 1477
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 37/198 (18%)
Query: 172 VLCLLILVADFL---VYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGML 228
V+ +L +V FL + ++SP F + R+A R++ I + +R LF L L
Sbjct: 1595 VVVILSIVGMFLAEMIEKYFVSPTLFRVI--RLARIGRILRLIKGAKGIRTLLFALMMSL 1652
Query: 229 GTYLNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSN-- 281
N+ L L L+ +++ S AYV E + F +FG ++ +F + T++
Sbjct: 1653 PALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGIDDMFNFETFGNSMICLFQITTSAGWD 1712
Query: 282 --------------NPDVWIPAYKASRWYC-------LFFVLYVLIGVYFVTNLILAVVY 320
+PD P + + C FFV Y++I V N+ +AV+
Sbjct: 1713 GLLAPILNSAPPDCDPDTIHPG-SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVIL 1771
Query: 321 DSFK---SQLAKQVSEMD 335
++F + A+ +SE D
Sbjct: 1772 ENFSVATEESAEPLSEDD 1789
>sp|P04775|SCN2A_RAT Sodium channel protein type 2 subunit alpha OS=Rattus norvegicus
GN=Scn2a PE=1 SV=1
Length = 2005
Score = 39.7 bits (91), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 249 AYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLY 303
Y+ + N +TSF T + LF D W Y+ A + Y +FFVL
Sbjct: 350 GYICVKAGRNPNYGYTSFDTFSWAFLSLFRLMTQ-DFWENLYQLTLRAAGKTYMIFFVLV 408
Query: 304 VLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDR 336
+ +G +++ NLILAVV +++ Q + E ++
Sbjct: 409 IFLGSFYLINLILAVVAMAYEEQNQATLEEAEQ 441
Score = 37.0 bits (84), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 35/197 (17%)
Query: 172 VLCLLILVADFL---VYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGML 228
V+ +L +V FL + ++SP F + R+A R++ I + +R LF L L
Sbjct: 1600 VVVILSIVGMFLAELIEKYFVSPTLFRVI--RLARIGRILRLIKGAKGIRTLLFALMMSL 1657
Query: 229 GTYLNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNP 283
N+ L L L+ +++ S AYV E + F +FG ++ +F + T++
Sbjct: 1658 PALFNIGLLLFLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWD 1717
Query: 284 DVWIPAYKASRWYC----------------------LFFVLYVLIGVYFVTNLILAVVYD 321
+ P + C FFV Y++I V N+ +AV+ +
Sbjct: 1718 GLLAPILNSGPPDCDPEKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILE 1777
Query: 322 SFK---SQLAKQVSEMD 335
+F + A+ +SE D
Sbjct: 1778 NFSVATEESAEPLSEDD 1794
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 288 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 329
P Y+ + + L+FV++++ G +F NL + V+ D+F Q K
Sbjct: 1441 PKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK 1482
>sp|Q99250|SCN2A_HUMAN Sodium channel protein type 2 subunit alpha OS=Homo sapiens
GN=SCN2A PE=1 SV=3
Length = 2005
Score = 39.7 bits (91), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 249 AYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLY 303
Y+ + N +TSF T + LF D W Y+ A + Y +FFVL
Sbjct: 350 GYICVKAGRNPNYGYTSFDTFSWAFLSLFRLMTQ-DFWENLYQLTLRAAGKTYMIFFVLV 408
Query: 304 VLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDR 336
+ +G +++ NLILAVV +++ Q + E ++
Sbjct: 409 IFLGSFYLINLILAVVAMAYEEQNQATLEEAEQ 441
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 37/198 (18%)
Query: 172 VLCLLILVADFL---VYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGML 228
V+ +L +V FL + ++SP F + R+A R++ I + +R LF L L
Sbjct: 1600 VVVILSIVGMFLAELIEKYFVSPTLFRVI--RLARIGRILRLIKGAKGIRTLLFALMMSL 1657
Query: 229 GTYLNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSN-- 281
N+ L L L+ +++ S AYV E + F +FG ++ +F + T++
Sbjct: 1658 PALFNIGLLLFLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWD 1717
Query: 282 --------------NPDVWIPAYKASRWYC-------LFFVLYVLIGVYFVTNLILAVVY 320
+PD P + + C FFV Y++I V N+ +AV+
Sbjct: 1718 GLLAPILNSGPPDCDPDKDHPG-SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVIL 1776
Query: 321 DSFK---SQLAKQVSEMD 335
++F + A+ +SE D
Sbjct: 1777 ENFSVATEESAEPLSEDD 1794
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 288 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 329
P Y+ + + L+FV++++ G +F NL + V+ D+F Q K
Sbjct: 1441 PKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK 1482
>sp|O46669|SCNAA_CANFA Sodium channel protein type 10 subunit alpha OS=Canis familiaris
GN=SCN10A PE=2 SV=1
Length = 1962
Score = 39.7 bits (91), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 263 FTSFGTTLYQMFVLFTTSNNPDVWIPAYKAS-RWYCLFFVLYVLIGVYFVTNLILAVVYD 321
F SF +F L T + ++ +AS + Y +FFVL + +G +++ NLILAVV
Sbjct: 348 FDSFAWAFLSLFRLMTQDSWERLYQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTM 407
Query: 322 SFKSQLAKQVSEMDRMRR 339
+++ Q + E++ +
Sbjct: 408 AYEEQNQATIDEIEAKEK 425
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 31/177 (17%)
Query: 188 YLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNV-LALGLLFLLFS- 245
Y SP F + R+A R++ I + +R LF L L N+ L L L+ ++S
Sbjct: 1573 YFSPTLFRVI--RLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSI 1630
Query: 246 ---SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSN-----NP---------DVWIP 288
+ +V +E + F +F ++ +F + T++ +P D +P
Sbjct: 1631 FGMASFPHVSWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNLP 1690
Query: 289 AYKASRWYC-------LFFVLYVLIGVYFVTNLILAVVYDSFK---SQLAKQVSEMD 335
SR C LFF Y++I V N+ +AV+ ++F + ++ +SE D
Sbjct: 1691 NSNGSRGNCGSPAVGILFFTTYIIISFLIVVNMYIAVILENFNVATQESSEPLSEDD 1747
Score = 36.2 bits (82), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 251 VIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWI-PAYKASRWYCLFFVLYVLIGVY 309
V F++ G + T M +++ + DV + P ++ + + L+FV++++ G +
Sbjct: 1355 VNFDNVAMGYLALLQVATFKGWMDIMYAAVDARDVNLQPKWEDNVYMYLYFVIFIIFGGF 1414
Query: 310 FVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEEL 369
F NL + V+ D+F Q K++ D K +N + +K+ + L
Sbjct: 1415 FTLNLFVGVIIDNFNQQ-KKKLGGQDIFMTEEQKKYYNAMKKLG----SKKPQKPIPRPL 1469
Query: 370 NKYR 373
NKY+
Sbjct: 1470 NKYQ 1473
>sp|Q2XVR5|SC4AA_TETNG Sodium channel protein type 4 subunit alpha A OS=Tetraodon
nigroviridis GN=scn4aa PE=3 SV=2
Length = 1863
Score = 39.3 bits (90), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 259 GNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLYVLIGVYFVTN 313
G F SFG +F L T D W ++ A + Y LFFV+ + +G +++ N
Sbjct: 355 GYTSFDSFGWAFLALFRLMTQ----DCWENLFQQTLRAAGKTYMLFFVVVIFLGSFYLIN 410
Query: 314 LILAVVYDSFKSQLAKQVSEMDRMRRR 340
LILAVV +++ Q Q S+ + +
Sbjct: 411 LILAVVAMAYEEQ--NQASQQEAREKE 435
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 29/168 (17%)
Query: 183 LVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNV-LALGLLF 241
L+ ++SP F + R+A R++ I R +R LF L L N+ L L L+
Sbjct: 1456 LIEKYFVSPTLFRVI--RLARIGRILRLIKGARGIRTLLFALMMSLPALFNIGLLLFLIM 1513
Query: 242 LLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYC 297
+FS S AYV E + F +FG+++ +F + T+ + +P C
Sbjct: 1514 FIFSIFGMSNFAYVKKEAGIDDMFNFETFGSSIICLFQITTSGGWDQILLPILNKEPPDC 1573
Query: 298 ----------------------LFFVLYVLIGVYFVTNLILAVVYDSF 323
+FF Y++I V N+ +A++ ++F
Sbjct: 1574 DPTLENPGTDVKGNCGNPMVGMMFFCSYIIISFLVVVNMYIAIILENF 1621
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 27/42 (64%)
Query: 288 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 329
P+Y+ + + ++FV++++ G +F NL + V+ D+F Q K
Sbjct: 1283 PSYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKRK 1324
>sp|Q62205|SCN9A_MOUSE Sodium channel protein type 9 subunit alpha OS=Mus musculus
GN=Scn9a PE=1 SV=2
Length = 1984
Score = 39.3 bits (90), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 259 GNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLYVLIGVYFVTN 313
G F +FG +F L T D W Y+ A + Y +FFV+ + +G +++ N
Sbjct: 340 GYTSFDTFGWAFLALFRLMTQ----DYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLIN 395
Query: 314 LILAVVYDSFKSQLAKQVSEMDR 336
LILAVV +++ Q + E +
Sbjct: 396 LILAVVAMAYEEQNQANIEEAKQ 418
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 32/182 (17%)
Query: 172 VLCLLILVADFL---VYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGML 228
V+ +L +V FL + ++SP F + R+A R++ I + +R LF L L
Sbjct: 1582 VVVILSIVGMFLAEMIEKYFVSPTLFRVI--RLARIGRILRLIKGAKGIRTLLFALMMSL 1639
Query: 229 GTYLNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNP 283
N+ L L L+ +++ S AYV E + F +FG ++ +F + T++
Sbjct: 1640 PALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNFETFGNSMICLFQITTSAGWD 1699
Query: 284 DVWIPAYKASRWYC----------------------LFFVLYVLIGVYFVTNLILAVVYD 321
+ P ++ C +FV Y++I V N+ +AV+ +
Sbjct: 1700 GLLAPILNSAPPDCDPKKVHPGSSVEGDCGNPSVGIFYFVSYIIISFLVVVNMYIAVILE 1759
Query: 322 SF 323
+F
Sbjct: 1760 NF 1761
Score = 33.5 bits (75), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 288 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 329
P Y+ + + ++FV++++ G +F NL + V+ D+F Q K
Sbjct: 1423 PIYEYNLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK 1464
>sp|Q2XVR4|SC4AB_TETNG Sodium channel protein type 4 subunit alpha B OS=Tetraodon
nigroviridis GN=scn4ab PE=3 SV=1
Length = 1715
Score = 39.3 bits (90), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 31/176 (17%)
Query: 175 LLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNV 234
L +L+AD ++ ++SP F + R+A RV+ I + +R LF L L N+
Sbjct: 1314 LGLLLAD-IIEKYFVSPTLFRVI--RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNI 1370
Query: 235 -LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSN-------- 281
L L L+ +FS S AYV E + F +FG ++ +F++ T++
Sbjct: 1371 GLLLFLIMFIFSIFGMSNFAYVKKEAMIDDMFNFETFGNSMICLFMITTSAGWDGLLSPI 1430
Query: 282 -------NPDVWIPAYKASRWYC-------LFFVLYVLIGVYFVTNLILAVVYDSF 323
+PD+ P R C +FF Y+++ V N+ +A++ ++F
Sbjct: 1431 MNKPPDCDPDLENPGTTV-RGNCGSPAIGIVFFSTYIIMSFLVVVNMYIAIILENF 1485
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 45/188 (23%)
Query: 259 GNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLYVLIGVYFVTN 313
G + SFG +F L T D W ++ A + Y +FFV+ + +G +++ N
Sbjct: 362 GYTSYDSFGWAFLALFRLMTQ----DFWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLIN 417
Query: 314 LILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYR 373
LILAVV ++ Q ++E + +E+ + + E L K
Sbjct: 418 LILAVVAMAYAEQNQATMAEAKQ---------------------KEEEYLHILEALKK-- 454
Query: 374 TLPNISREEFELIFDE---LDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFEN----L 426
REE + + E + + H+F+ + A A F K D SC+ + L
Sbjct: 455 ------REEEQAAWKEALKVQEPHNFEDDHKLCPPCWYAFANVFLKWDCCSCWRHLKRCL 508
Query: 427 PSIYHSPF 434
+I PF
Sbjct: 509 SAIVMDPF 516
Score = 37.0 bits (84), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 273 MFVLFTTSNNPDVWI-PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 329
M +++ ++ DV P Y+ + + L+FV++++ G +F NL + V+ D+F Q AK
Sbjct: 1132 MEIMYAAVDSRDVESQPIYEVNIYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAK 1189
>sp|P02631|ONCO_RAT Oncomodulin OS=Rattus norvegicus GN=Ocm PE=1 SV=2
Length = 109
Score = 39.3 bits (90), Expect = 0.080, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 321 DSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRT-LPNIS 379
D+F+ Q Q S + +M + F IDN G+L+ ++ +K F L K+++ ++
Sbjct: 23 DTFEPQKFFQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDE-LKYF--LQKFQSDARELT 79
Query: 380 REEFELIFDELDDTHDFKINLDEFADLCNA 409
E + + D D+ D KI DEF ++ ++
Sbjct: 80 ESETKSLMDAADNDGDGKIGADEFQEMVHS 109
>sp|P35500|SCNA_DROME Sodium channel protein para OS=Drosophila melanogaster GN=para PE=2
SV=3
Length = 2131
Score = 38.9 bits (89), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 259 GNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLYVLIGVYFVTN 313
G F SFG F L T D W Y+ A W+ LFF++ + +G +++ N
Sbjct: 367 GYTSFDSFGWAFLSAFRLMTQ----DFWEDLYQLVLRAAGPWHMLFFIVIIFLGSFYLVN 422
Query: 314 LILAVVYDSF 323
LILA+V S+
Sbjct: 423 LILAIVAMSY 432
>sp|P02719|SCNA_ELEEL Sodium channel protein OS=Electrophorus electricus PE=2 SV=1
Length = 1820
Score = 38.9 bits (89), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 97/239 (40%), Gaps = 31/239 (12%)
Query: 172 VLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTY 231
V+ ++ L+ ++ ++SP F + R+A RV+ I + +R LF L L
Sbjct: 1394 VISIIGLLLSDIIEKYFVSPTLFRVI--RLARIARVLRLIRAAKGIRTLLFALMMSLPAL 1451
Query: 232 LNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSN----- 281
N+ L L L+ +FS S AYV + V F +FG ++ +F + T++
Sbjct: 1452 FNIGLLLFLIMFIFSIFGMSNFAYVKKQGGVDDIFNFETFGNSMICLFEITTSAGWDGLL 1511
Query: 282 -----------NPDVWIPAYKASRWYC-------LFFVLYVLIGVYFVTNLILAVVYDSF 323
+PDV P R C FF Y+++ V N+ +A++ ++F
Sbjct: 1512 LPTLNTGPPDCDPDVENPGTDV-RGNCGNPGKGITFFCSYIILSFLVVVNMYIAIILENF 1570
Query: 324 KSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREE 382
+ + + ++ D + FL+ + L + +PN +R +
Sbjct: 1571 GVAQEESSDLLCEDDFVMFDETWHKFDVHGTQFLDYNDLPRFVNALQEPMRIPNPNRHK 1629
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 288 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSE 333
P Y+ + + L+FV++++ G +F NL + V+ D+F Q K E
Sbjct: 1232 PIYEINVYMYLYFVIFIVFGAFFTLNLFIGVIIDNFNRQKQKLGGE 1277
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 28/42 (66%)
Query: 292 ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSE 333
A + Y +FF++ + +G +++ NLILAVV +++ Q ++E
Sbjct: 374 AGKSYMVFFIMVIFLGSFYLINLILAVVAMAYEEQNQATLAE 415
>sp|O35508|ONCO_CAVPO Oncomodulin OS=Cavia porcellus GN=OCM PE=2 SV=3
Length = 109
Score = 38.9 bits (89), Expect = 0.089, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 321 DSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRT-LPNIS 379
D+F+ Q Q S + +M + F IDN G+L++E+ +K F L K+ + ++
Sbjct: 23 DTFEPQKFFQTSGLSKMSASQVKDVFRFIDNDQSGYLDEEE-LKFF--LQKFESGARELT 79
Query: 380 REEFELIFDELDDTHDFKINLDEFADLCNA 409
E + + D+ D KI DEF ++ ++
Sbjct: 80 ESETKSLMAAADNDGDGKIGADEFQEMVHS 109
>sp|P04774|SCN1A_RAT Sodium channel protein type 1 subunit alpha OS=Rattus norvegicus
GN=Scn1a PE=2 SV=1
Length = 2009
Score = 38.9 bits (89), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 249 AYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLY 303
Y+ + N +TSF T + LF D W Y+ A + Y +FFVL
Sbjct: 348 GYMCVKAGRNPNYGYTSFDTFSWAFLSLFRLMTQ-DFWENLYQLTLRAAGKTYMIFFVLV 406
Query: 304 VLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDR 336
+ +G +++ NLILAVV +++ Q + E ++
Sbjct: 407 IFLGSFYLINLILAVVAMAYEEQNQATLEEAEQ 439
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 288 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 329
P Y+ S + L+FV++++ G +F NL + V+ D+F Q K
Sbjct: 1451 PKYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK 1492
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 35/197 (17%)
Query: 172 VLCLLILVADFL---VYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGML 228
V+ +L +V FL + ++SP F + R+A R++ I + +R LF L L
Sbjct: 1610 VVVILSIVGMFLAELIEKYFVSPTLFRVI--RLARIGRILRLIKGAKGIRTLLFALMMSL 1667
Query: 229 GTYLNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNP 283
N+ L L L+ +++ S AYV E + F +FG ++ +F + T++
Sbjct: 1668 PALFNIGLLLFLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWD 1727
Query: 284 DVWIPAYKASRWYC----------------------LFFVLYVLIGVYFVTNLILAVVYD 321
+ P + C FFV Y++I V N+ +AV+ +
Sbjct: 1728 GLLAPILNSKPPDCDPNKVNPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILE 1787
Query: 322 SFK---SQLAKQVSEMD 335
+F + A+ +SE D
Sbjct: 1788 NFSVATEESAEPLSEDD 1804
>sp|P35498|SCN1A_HUMAN Sodium channel protein type 1 subunit alpha OS=Homo sapiens
GN=SCN1A PE=1 SV=2
Length = 2009
Score = 38.9 bits (89), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 249 AYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLY 303
Y+ + N +TSF T + LF D W Y+ A + Y +FFVL
Sbjct: 348 GYMCVKAGRNPNYGYTSFDTFSWAFLSLFRLMTQ-DFWENLYQLTLRAAGKTYMIFFVLV 406
Query: 304 VLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDR 336
+ +G +++ NLILAVV +++ Q + E ++
Sbjct: 407 IFLGSFYLINLILAVVAMAYEEQNQATLEEAEQ 439
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 288 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 329
P Y+ S + L+FV++++ G +F NL + V+ D+F Q K
Sbjct: 1451 PKYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK 1492
Score = 36.6 bits (83), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 35/197 (17%)
Query: 172 VLCLLILVADFL---VYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGML 228
V+ +L +V FL + ++SP F + R+A R++ I + +R LF L L
Sbjct: 1610 VVVILSIVGMFLAELIEKYFVSPTLFRVI--RLARIGRILRLIKGAKGIRTLLFALMMSL 1667
Query: 229 GTYLNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNP 283
N+ L L L+ +++ S AYV E + F +FG ++ +F + T++
Sbjct: 1668 PALFNIGLLLFLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWD 1727
Query: 284 DVWIPAYKASRWYC----------------------LFFVLYVLIGVYFVTNLILAVVYD 321
+ P + C FFV Y++I V N+ +AV+ +
Sbjct: 1728 GLLAPILNSKPPDCDPNKVNPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILE 1787
Query: 322 SFK---SQLAKQVSEMD 335
+F + A+ +SE D
Sbjct: 1788 NFSVATEESAEPLSEDD 1804
>sp|Q9Y5Y9|SCNAA_HUMAN Sodium channel protein type 10 subunit alpha OS=Homo sapiens
GN=SCN10A PE=1 SV=2
Length = 1956
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 249 AYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYK-----ASRWYCLFFVLY 303
Y+ + + + +TSF + + LF D W Y+ + + Y +FFVL
Sbjct: 322 GYICLKTSDNPDFNYTSFDSFAWAFLSLFRLMTQ-DSWERLYQQTLRTSGKIYMIFFVLV 380
Query: 304 VLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRR 340
+ +G +++ NLILAVV +++ Q E++ ++
Sbjct: 381 IFLGSFYLVNLILAVVTMAYEEQNQATTDEIEAKEKK 417
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 251 VIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWI-PAYKASRWYCLFFVLYVLIGVY 309
V F++ G + T M +++ ++ +V + P ++ + + L+FV++++ G +
Sbjct: 1348 VNFDNVAMGYLALLQVATFKGWMDIMYAAVDSREVNMQPKWEDNVYMYLYFVIFIIFGGF 1407
Query: 310 FVTNLILAVVYDSFKSQLAK 329
F NL + V+ D+F Q K
Sbjct: 1408 FTLNLFVGVIIDNFNQQKKK 1427
>sp|Q02789|CAC1S_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1S OS=Mus
musculus GN=Cacna1s PE=1 SV=2
Length = 1880
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 18/155 (11%)
Query: 253 FEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVW---IPAYKASRW----YCLFFVLYVL 305
FEDT F +F L +F + T + V I AY + C++F++ +
Sbjct: 587 FEDTEVRRSNFDNFPQALISVFQVLTGEDWNSVMYNGIMAYGGPTYPGVLVCIYFIILFV 646
Query: 306 IGVYFVTNLILAVVYDSF---KSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQC 362
G Y + N+ LA+ D+ +S + Q ++ + +RR + K L D +
Sbjct: 647 CGNYILLNVFLAIAVDNLAEAESLTSAQKAKAEERKRRKMSKG--LPDKSEE---ERATV 701
Query: 363 IKLFEELNKYRTLPNISR---EEFELIFDELDDTH 394
K E+ +K +P ++ +EFE +E+ D +
Sbjct: 702 TKKLEQKSKGEGIPTTAKLKIDEFESNVNEVKDPY 736
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 28/147 (19%)
Query: 258 QGNMVFTSFGTTLYQMFVLFTTSNNPDV--WIPAYKASRWYCLFFVLYVLIGVYFVTNLI 315
G F +FG ++ ++ + DV W+ + W ++FV +L+G +F+ NL+
Sbjct: 270 HGITHFDNFGFSMLTVYQCISMEGWTDVLYWVNDAIGNEWPWIYFVTLILLGSFFILNLV 329
Query: 316 LAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTL 375
L V+ F + K S R T K L ++Q +L E+L Y +
Sbjct: 330 LGVLSGEFTKEREKAKS------RGTFQK------------LREKQ--QLEEDLRGYMSW 369
Query: 376 PNISREEFELIFDELDDTHDFKINLDE 402
I++ E + D +DD + K++LDE
Sbjct: 370 --ITQGE---VMD-VDDLREGKLSLDE 390
>sp|Q2XVR7|SC4AA_TAKRU Sodium channel protein type 4 subunit alpha A OS=Takifugu rubripes
GN=scn4aa PE=3 SV=1
Length = 1892
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 259 GNMVFTSFGTTLYQMFVLFTTSNNPDVW-IPAYKASRWYCLFFVLYVLIGVYFVTNLILA 317
G F SFG +F L T N ++ + A + Y LFFV+ + +G +++ NLILA
Sbjct: 364 GYTSFDSFGWAFLALFRLMTQDNWESLFQLTLRAAGQTYMLFFVVVIFLGSFYLINLILA 423
Query: 318 VVYDSFKSQ 326
VV ++ Q
Sbjct: 424 VVAMAYDEQ 432
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 29/163 (17%)
Query: 188 YLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNV-LALGLLFLLFS- 245
++SP F + R+A R++ I R +R LF L L N+ L L L+ +FS
Sbjct: 1481 FVSPTLFRVI--RLARIGRILRLIKGARGIRTLLFALMMSLPALFNIGLLLFLIMFIFSI 1538
Query: 246 ---SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYC----- 297
S AYV E + F +FG+++ +F + T++ + +P C
Sbjct: 1539 FGMSNFAYVKKEAGINDMFNFETFGSSIICLFQITTSAGWDTLLLPMLNKEPPDCDPAFE 1598
Query: 298 -----------------LFFVLYVLIGVYFVTNLILAVVYDSF 323
+FF Y++I V N+ +A++ ++F
Sbjct: 1599 NPGTDVKGNCGNPMMGMVFFCSYIIISFLVVVNMYIAIILENF 1641
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 27/42 (64%)
Query: 288 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 329
P+Y+ + + ++FV++++ G +F NL + V+ D+F Q K
Sbjct: 1303 PSYEINLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK 1344
>sp|Q13698|CAC1S_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1S OS=Homo
sapiens GN=CACNA1S PE=1 SV=4
Length = 1873
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 18/155 (11%)
Query: 253 FEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVW---IPAYKASRW----YCLFFVLYVL 305
FEDT F +F L +F + T + + I AY + C++F++ +
Sbjct: 587 FEDTEVRRSNFDNFPQALISVFQVLTGEDWTSMMYNGIMAYGGPSYPGMLVCIYFIILFV 646
Query: 306 IGVYFVTNLILAVVYDSF---KSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQC 362
G Y + N+ LA+ D+ +S + Q ++ + +RR + K L D K
Sbjct: 647 CGNYILLNVFLAIAVDNLAEAESLTSAQKAKAEEKKRRKMSKG--LPDKSEE---EKSTM 701
Query: 363 IKLFEELNKYRTLPNISR---EEFELIFDELDDTH 394
K E+ K +P ++ +EFE +E+ D +
Sbjct: 702 AKKLEQKPKGEGIPTTAKLKIDEFESNVNEVKDPY 736
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 258 QGNMVFTSFGTTLYQMFVLFTTSNNPDV--WIPAYKASRWYCLFFVLYVLIGVYFVTNLI 315
G F +FG ++ ++ T DV W+ + W ++FV +L+G +F+ NL+
Sbjct: 270 HGITHFDNFGFSMLTVYQCITMEGWTDVLYWVNDAIGNEWPWIYFVTLILLGSFFILNLV 329
Query: 316 LAVVYDSFKSQLAKQVS 332
L V+ F + K S
Sbjct: 330 LGVLSGEFTKEREKAKS 346
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.144 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 178,021,795
Number of Sequences: 539616
Number of extensions: 7556815
Number of successful extensions: 30834
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 119
Number of HSP's that attempted gapping in prelim test: 30329
Number of HSP's gapped (non-prelim): 570
length of query: 494
length of database: 191,569,459
effective HSP length: 122
effective length of query: 372
effective length of database: 125,736,307
effective search space: 46773906204
effective search space used: 46773906204
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 63 (28.9 bits)